Citrus Sinensis ID: 002927
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 864 | 2.2.26 [Sep-21-2011] | |||||||
| Q86TW2 | 530 | Uncharacterized aarF doma | yes | no | 0.226 | 0.369 | 0.366 | 8e-29 | |
| Q5ZMT7 | 519 | Uncharacterized aarF doma | yes | no | 0.243 | 0.404 | 0.334 | 4e-27 | |
| Q5M7P6 | 523 | Uncharacterized aarF doma | yes | no | 0.240 | 0.397 | 0.331 | 2e-26 | |
| Q6INL7 | 520 | Uncharacterized aarF doma | N/A | no | 0.240 | 0.4 | 0.331 | 2e-26 | |
| Q54TR5 | 668 | Probable serine/threonine | yes | no | 0.342 | 0.443 | 0.276 | 5e-26 | |
| Q9D0L4 | 525 | Uncharacterized aarF doma | yes | no | 0.226 | 0.373 | 0.342 | 2e-25 | |
| Q46189 | 530 | Uncharacterized protein i | N/A | no | 0.253 | 0.413 | 0.312 | 4e-25 | |
| P73627 | 585 | Uncharacterized protein s | N/A | no | 0.255 | 0.377 | 0.309 | 3e-24 | |
| P73577 | 408 | Uncharacterized protein s | N/A | no | 0.247 | 0.524 | 0.317 | 4e-24 | |
| Q80V03 | 582 | Uncharacterized aarF doma | no | no | 0.269 | 0.400 | 0.308 | 5e-24 |
| >sp|Q86TW2|ADCK1_HUMAN Uncharacterized aarF domain-containing protein kinase 1 OS=Homo sapiens GN=ADCK1 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 129 bits (325), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 118/210 (56%), Gaps = 14/210 (6%)
Query: 4 MFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE 63
+F F +TPL TAS+AQVH+A L DGR V VKVQH ++ +D+ + +V +
Sbjct: 152 LFQSFDDTPLGTASLAQVHKAVLHDGRTVAVKVQHPKVRAQSSKDILLMEVLVLAVKQLF 211
Query: 64 PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV 123
P+++F ++DE K P ELDF +E N VS L +H D K P D+
Sbjct: 212 PEFEFMWLVDEAKKNLPLELDFLNEGRNAEKVSQML----RHFDFLKVPRIHWDL----- 262
Query: 124 IQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGN 183
S+E VL++EF+DG ++ND + +E ++ ++ + + Y+ I+V+GF + DPHPGN
Sbjct: 263 --STERVLLMEFVDGGQVNDRDYMERNKIDVNEISRHLGKMYSEMIFVNGFVHCDPHPGN 320
Query: 184 FLVSKDP---PHRPILLDFGLTKKLSSSMK 210
LV K P +LLD GL + L+ +
Sbjct: 321 VLVRKHPGTGKAEIVLLDHGLYQMLTEEFR 350
|
The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr). Homo sapiens (taxid: 9606) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: - |
| >sp|Q5ZMT7|ADCK1_CHICK Uncharacterized aarF domain-containing protein kinase 1 OS=Gallus gallus GN=ADCK1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 123/224 (54%), Gaps = 14/224 (6%)
Query: 4 MFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE 63
+F+ F +TPL AS+AQVH+A L DGR V VK+QH ++ +D+ + ++ +
Sbjct: 142 LFVSFEDTPLGAASLAQVHKAVLQDGRTVAVKIQHPKVQAQSSKDIFLMEVLLLVVKQIF 201
Query: 64 PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV 123
P ++F +++E K P ELDF +E N V+ L K+ + K P ++
Sbjct: 202 PDFEFMWLVEEAKKNLPLELDFLNEGRNAEKVAQML----KNFEFLKVPRIYWEL----- 252
Query: 124 IQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGN 183
S+ VL++EFM+G ++ND +E G++ ++ + + Y+ I+V+GF + DPHPGN
Sbjct: 253 --STRRVLLMEFMEGGQVNDKAYMEKNGIDVNEISRNLGKLYSEMIFVNGFVHCDPHPGN 310
Query: 184 FLVSKDP---PHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGD 224
LV K P ILLD GL + LS S + +++ A + D
Sbjct: 311 VLVKKCPDSGKAYIILLDHGLYQVLSESFRMDYCRLWLALIKAD 354
|
The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr). Gallus gallus (taxid: 9031) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q5M7P6|ADCK1_XENTR Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus tropicalis GN=adck1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 122/226 (53%), Gaps = 18/226 (7%)
Query: 4 MFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE 63
+F++F E PL AS+AQVHRA L DGR+V VKVQH ++ D+ + ++ +
Sbjct: 145 VFVEFEEKPLGAASLAQVHRAVLQDGRKVAVKVQHPKVQAQSARDILLMEVLLHAVKKIF 204
Query: 64 PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV 123
PQ++F +I+E K P ELDF +E N +SA + + + IP +
Sbjct: 205 PQFEFMWLIEEAKKNLPLELDFENEGRNAEKMSAIVSSFS-------------FLRIPRI 251
Query: 124 IQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHP 181
S++ VL++E+M+G ++ND E ++ ++ +V + + Y+ I+V GF + DPHP
Sbjct: 252 YWELSTKRVLVMEYMEGGQVNDREYMKRNQIDINQVARALGQLYSEMIFVHGFVHCDPHP 311
Query: 182 GNFLVSKDPPH---RPILLDFGLTKKLSSSMKQALAKMFFAAAEGD 224
GN LV ++P ILLD GL + L+ S + ++ A D
Sbjct: 312 GNVLVRQNPETLVPEIILLDHGLYQVLTESFRLDYCSLWQALIAAD 357
|
The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr). Xenopus tropicalis (taxid: 8364) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q6INL7|ADCK1_XENLA Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus laevis GN=adck1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 123/226 (54%), Gaps = 18/226 (7%)
Query: 4 MFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE 63
+F +F +TPL AS+AQVHRA L DGR+V VKVQH ++ D+ + ++ +
Sbjct: 145 VFEEFEKTPLGAASLAQVHRAVLQDGRKVAVKVQHPKVQAQSSRDILIMEVLLHVVKKIF 204
Query: 64 PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV 123
PQ++F +I+E K P ELDF +E N +S+ + + + IP +
Sbjct: 205 PQFEFMWLIEEAKKNLPLELDFQNEGRNAEKMSSIVSSFS-------------FLRIPRI 251
Query: 124 IQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHP 181
S++ VL++E+M+G ++ND E ++ ++ KV + + Y+ I+V GF + DPHP
Sbjct: 252 YWELSTKRVLVMEYMEGGQVNDREYMKRNQIDVNKVSHALGKLYSEMIFVHGFVHCDPHP 311
Query: 182 GNFLVSKDPPH---RPILLDFGLTKKLSSSMKQALAKMFFAAAEGD 224
GN LV ++P + ILLD GL + L+ S + ++ A D
Sbjct: 312 GNVLVRQNPENCAPEIILLDHGLYQVLTESFRLDYCSLWQALIAAD 357
|
The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr). Xenopus laevis (taxid: 8355) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q54TR5|ABKB_DICDI Probable serine/threonine-protein kinase abkB OS=Dictyostelium discoideum GN=abkB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 170/340 (50%), Gaps = 44/340 (12%)
Query: 4 MFMDFVETPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWI 59
MF+DF P+ +AS+AQVH+A L + +V VKVQ+ G+ +D+ + +++ +I
Sbjct: 311 MFIDFERLPINSASLAQVHKAKLKLENDEIIEVAVKVQYPGLMNKFQKDMDSLDNVLTYI 370
Query: 60 AWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVL 119
P + F+ I+ E +ELDF +EA+N+ + L N+ +
Sbjct: 371 TLFFPSFQFSWILGEASSCLSQELDFVNEAKNSEKMKQ-LFIGNQQ------------LS 417
Query: 120 IPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNG 177
IP+V +++ +L +EF+ G+R+++ E L+ G++ +++ + +A QI+V GF +
Sbjct: 418 IPKVYWNHTTKRILTMEFIHGVRIDNREGLDKLGIDLKELYYLFSDIFAQQIFVHGFLHS 477
Query: 178 DPHPGNFLVSKDPPHRP--ILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAF-AE 234
DPHPGN LV K P +P +LLD GL KK+ +++ ++ + GD A S F AE
Sbjct: 478 DPHPGNLLVRKTPNGKPDLVLLDHGLYKKIDENVRLDFCHLWKSLCLGD--AKTSEFYAE 535
Query: 235 MGLRLRLDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVK 294
RL A + L + + E +K E + + L VI E +K
Sbjct: 536 -----RLGAGIYAKHLGILLNLNPSKSRENLRNMK--RELKDQTLVVINEILK------- 581
Query: 295 RFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMR 334
P +I++ + NL+R +++ + +L++ +
Sbjct: 582 ------NLPKEILLVLKTNNLIRQITTHFGIENGFLNMAK 615
|
Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q9D0L4|ADCK1_MOUSE Uncharacterized aarF domain-containing protein kinase 1 OS=Mus musculus GN=Adck1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 116/210 (55%), Gaps = 14/210 (6%)
Query: 4 MFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE 63
+F+ F +TPL AS+AQVH+A L DGR V VKVQH ++ +D+ + +V +
Sbjct: 145 LFLSFDDTPLGAASLAQVHKAVLHDGRTVAVKVQHPKVQAQSSKDILLMEVLVLAVKQLF 204
Query: 64 PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV 123
P ++F ++DE K P ELDF +E N V+ L +H D K P ++
Sbjct: 205 PDFEFMWLVDEAKKNLPLELDFLNEGRNAEKVAHML----RHFDFLKVPQIHWEL----- 255
Query: 124 IQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGN 183
S++ VL++EF++G ++ND +E ++ ++ + + Y+ I+V+GF + DPHPGN
Sbjct: 256 --STKRVLLMEFVEGGQVNDRAYMEKNQIDVNEISCHLGKMYSEMIFVNGFVHCDPHPGN 313
Query: 184 FLVSKDP---PHRPILLDFGLTKKLSSSMK 210
LV K P +LLD GL + L+ +
Sbjct: 314 VLVRKRPDTGKAEIVLLDHGLYQVLTEEFR 343
|
The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr). Mus musculus (taxid: 10090) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q46189|YHG1_CLOPA Uncharacterized protein in hydrogenase 1 5'region (Fragment) OS=Clostridium pasteurianum PE=3 SV=1 | Back alignment and function description |
|---|
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 128/237 (54%), Gaps = 18/237 (7%)
Query: 5 FMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIA--WA 62
F+ F +TP+ +ASIAQVH A L DGR V+VK+Q GI ++ DL K +++ +
Sbjct: 100 FLYFDKTPIGSASIAQVHDAILKDGRFVIVKIQRPGIAEMMKTDLSIIKKLLNITKTKFT 159
Query: 63 EPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSN-KKPAYEVDVLIP 121
+ D IDE +ELDF +E N + K +ED + Y +D L
Sbjct: 160 DALIDPKEAIDELFISTTQELDFINEINNIK------KFKKLNEDVKFVRTPYTIDKL-- 211
Query: 122 EVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHP 181
+E ++++E + GI++++ + L G + +++ +++T +Y Q++ DGFF+GDPHP
Sbjct: 212 ----CTEKIIVMEKIVGIKIDNLKKLLNEGYDLEELGKKLTLSYFKQVFQDGFFHGDPHP 267
Query: 182 GNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 238
GN L+ ++ +DFG+ +S S+K +L A A D ++S +G++
Sbjct: 268 GNLLIREN---HICYIDFGIMGTISKSLKISLNDAILAVAYHDVNKMISVIMSIGVK 321
|
Clostridium pasteurianum (taxid: 1501) |
| >sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 119/242 (49%), Gaps = 21/242 (8%)
Query: 1 MGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWI- 59
+ ++ F PLA AS+ QVH+A L G VVVKVQ G+K + DL K I +
Sbjct: 148 IAKLYRSFDPVPLAAASLGQVHKAQLHTGEDVVVKVQRPGLKKLFTIDLAILKKIAQYFQ 207
Query: 60 ---AWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEV 116
W + D+N I +E CK +E D+ E + N + ED K
Sbjct: 208 NHPKWGRGR-DWNGIYEECCKILWQETDYLREGRSADTFRRNF----RGEDWVK------ 256
Query: 117 DVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGF 174
+P V +S +L LE++ GI+++ ++LEA G+ ++++ + RAY Q+ GF
Sbjct: 257 ---VPRVYWRYTSTQILTLEYLPGIKISHYDALEAAGLERKELAQLGARAYLFQLLNHGF 313
Query: 175 FNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAE 234
F+ DPHPGN VS + I DFG+ +++ K L F AE + ++++
Sbjct: 314 FHADPHPGNLAVSPEAGEL-IFYDFGMMGEITPDTKNKLMDTLFGVAEKNAERIVNSLVA 372
Query: 235 MG 236
+G
Sbjct: 373 LG 374
|
Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708) |
| >sp|P73577|Y889_SYNY3 Uncharacterized protein slr0889 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0889 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 117/233 (50%), Gaps = 19/233 (8%)
Query: 1 MGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIA 60
+G F + P+A SI Q+HRA L G V +KV+ GI I+ +D K + + +A
Sbjct: 106 LGETFQEIESEPIAAGSIGQIHRAVLQSGETVAIKVKRPGIDVIVEQDSLLIKDVAELLA 165
Query: 61 WAE--PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDV 118
E YD + DE+ + EL+F++EA T + NL K D N+ +
Sbjct: 166 LTEFGQNYDIVKLADEFTQTVKAELNFDTEAAYTNNLRTNLA-KTTWFDPNQ-------L 217
Query: 119 LIPEVIQ--SSETVLILEFMDGI-----RLNDCESLEAFGVNKQKVVEEITRAYAHQIYV 171
+IP+V +++ L+LE++DG+ L S + K+++ + RA+ Q+YV
Sbjct: 218 VIPKVYWELTNQKFLVLEWLDGVPILTADLTQPPSDKDIAEKKKEITTLLFRAFFQQLYV 277
Query: 172 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGD 224
DGFF+ DPHPGN D R L+D G+ +L +Q L +M A + D
Sbjct: 278 DGFFHADPHPGNIFYLAD--GRLALIDCGMVGRLDPRTRQLLTEMLLAIVDLD 328
|
Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708) |
| >sp|Q80V03|ADCK5_MOUSE Uncharacterized aarF domain-containing protein kinase 5 OS=Mus musculus GN=Adck5 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 132/250 (52%), Gaps = 17/250 (6%)
Query: 4 MFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE 63
+F +F P+A AS+AQVHRA L DG V VKVQ+ ++ D++ + ++ +
Sbjct: 197 LFQEFDYEPMAAASLAQVHRAKLHDGTDVAVKVQYIDLRDRFDGDVQTLELLLRLVELMH 256
Query: 64 PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV 123
P + F+ ++ + +ELDF +E N + L K+ H V+IP V
Sbjct: 257 PSFGFSWVLQDLKGTLVQELDFENEGRNAERCAQEL--KHFHY-----------VVIPRV 303
Query: 124 I--QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHP 181
+SS+ VL +F +G ++ND E +++ G+ Q V +++ + +A QI+ GF + DPHP
Sbjct: 304 HWDRSSKRVLTADFCNGCKVNDMEGIKSQGLAVQDVAKKLIQTFAEQIFHTGFIHSDPHP 363
Query: 182 GNFLVSKDPPHRP--ILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRL 239
GN LV K P + +LLD GL + L + +L +++ A D+ A+ A +G++
Sbjct: 364 GNVLVRKGPDGKAELVLLDHGLYQFLDEKDRSSLCQLWRAIILRDNAAMKKHAAALGVQD 423
Query: 240 RLDVPEQAME 249
+ E M+
Sbjct: 424 YMLFSEVLMQ 433
|
The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr). Mus musculus (taxid: 10090) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 864 | ||||||
| 225429826 | 978 | PREDICTED: uncharacterized protein LOC10 | 0.988 | 0.873 | 0.724 | 0.0 | |
| 255574137 | 965 | Ubiquinone biosynthesis protein coq-8, p | 0.982 | 0.879 | 0.729 | 0.0 | |
| 297812683 | 1011 | ABC1 family protein [Arabidopsis lyrata | 0.980 | 0.837 | 0.690 | 0.0 | |
| 224115612 | 987 | predicted protein [Populus trichocarpa] | 0.988 | 0.865 | 0.709 | 0.0 | |
| 18420844 | 1009 | ABC1 family protein [Arabidopsis thalian | 0.981 | 0.840 | 0.689 | 0.0 | |
| 334187920 | 1040 | ABC1 family protein [Arabidopsis thalian | 0.981 | 0.815 | 0.689 | 0.0 | |
| 224121392 | 972 | predicted protein [Populus trichocarpa] | 0.972 | 0.864 | 0.720 | 0.0 | |
| 356552616 | 965 | PREDICTED: uncharacterized protein LOC10 | 0.979 | 0.876 | 0.702 | 0.0 | |
| 356563713 | 994 | PREDICTED: uncharacterized protein LOC10 | 0.979 | 0.851 | 0.694 | 0.0 | |
| 356563711 | 966 | PREDICTED: uncharacterized protein LOC10 | 0.979 | 0.875 | 0.694 | 0.0 |
| >gi|225429826|ref|XP_002283043.1| PREDICTED: uncharacterized protein LOC100242392 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1290 bits (3339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/875 (72%), Positives = 734/875 (83%), Gaps = 21/875 (2%)
Query: 1 MGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIA 60
M +F FV+ PLATASIAQVHRATL G VVVKVQH+GIKT+ILEDLKNAKSI DWIA
Sbjct: 114 MDDLFSSFVDAPLATASIAQVHRATLRSGEDVVVKVQHEGIKTVILEDLKNAKSIADWIA 173
Query: 61 WAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLI 120
WAEPQYDFNP+IDEWC+EAPKELDF+ EAENTR VS NLGCKNK++ P +VDVLI
Sbjct: 174 WAEPQYDFNPMIDEWCREAPKELDFDHEAENTRKVSRNLGCKNKND---VMPGNQVDVLI 230
Query: 121 PEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPH 180
PE+IQS+E VLILE+MDG+RLNDCESL+AFG++KQK+VEEITRAYAHQIYVDGFFNGDPH
Sbjct: 231 PEIIQSTEKVLILEYMDGVRLNDCESLKAFGIDKQKLVEEITRAYAHQIYVDGFFNGDPH 290
Query: 181 PGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLR 240
PGNFLVSK+PPHRP+LLDFGLTK LSSSMKQALAK+F A+AEGDHVALLSA +EMGLRLR
Sbjct: 291 PGNFLVSKEPPHRPVLLDFGLTKSLSSSMKQALAKLFLASAEGDHVALLSALSEMGLRLR 350
Query: 241 LDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVD 300
LD+P+QAMEV+T+FFR+S PA+EA E +++LS+QR KN+KVIQEKMKLN+KEVKRFNPVD
Sbjct: 351 LDLPDQAMEVATVFFRSSTPASEALENMRSLSKQRTKNMKVIQEKMKLNKKEVKRFNPVD 410
Query: 301 AFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKP 360
AFPGDIVIF+RVLNLLRGLS+ M+VRI YLDIMRPFAE VLQ INK P+V+++WIY P
Sbjct: 411 AFPGDIVIFARVLNLLRGLSTIMDVRISYLDIMRPFAESVLQGYINKGPAVNSQWIYDTP 470
Query: 361 IHSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPV 420
+HSDVE KLR LVELGND KILGIQVCAYKDGEVIIDT+AG+LGRYDPRPVQPDSLFPV
Sbjct: 471 VHSDVETKLRRLLVELGNDDKILGIQVCAYKDGEVIIDTAAGVLGRYDPRPVQPDSLFPV 530
Query: 421 FSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVD 480
FSVTKGITAGM+HWLVD GKLKL E+IANIWPEF SN K+LIKVHHVL HTSGL N D
Sbjct: 531 FSVTKGITAGMIHWLVDKGKLKLGESIANIWPEFGSNKKELIKVHHVLTHTSGLQNALGD 590
Query: 481 LSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILE 540
+S ENPLL+C+WDECLNRIA+S PETEPG EQLYHYLSFGWLCGGIIE ASGKKFQEILE
Sbjct: 591 ISRENPLLMCEWDECLNRIAMSVPETEPGHEQLYHYLSFGWLCGGIIEHASGKKFQEILE 650
Query: 541 EGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQ 600
E I+PL I+GELY+GIPPGVESRLA+LT+DTDD+ K+S +NRPD LP SF + IS+
Sbjct: 651 EAFIRPLQIEGELYVGIPPGVESRLATLTVDTDDVRKLSVYSNRPD--LPVSFTSN-ISE 707
Query: 601 LAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHP 660
L + PA+FN LNIRR+IIP+ANGHCSARALARYYA LADGG++PPPHS SKPPLGSHP
Sbjct: 708 LVTVLPALFNTLNIRRSIIPSANGHCSARALARYYATLADGGILPPPHSTSSKPPLGSHP 767
Query: 661 HIPKFPSHETSKKQKGTKKELLAALKNKTN----NSEHGHKYTKDLEGGSHIRTASGDTY 716
HIP FPS +TSKKQKG K + +AA NKTN N++ G + +KD + R A D +
Sbjct: 768 HIPSFPSQKTSKKQKGGKSKDVAAASNKTNIHEQNTDDGSRSSKD---SCYNRKARCDNH 824
Query: 717 ARL------INIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLAL 770
R + T S+N S N D+ S+ KIF+NPRIHDAFLGVG+Y +
Sbjct: 825 GRFPHDSGSSSESTVSNNGHRIGSTENGDDSPKSDT-KIFSNPRIHDAFLGVGEYENYGF 883
Query: 771 PNGRFGLGFKRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIH 830
P+G+FGLGFK +++DG+ +GFGHSGMGGSTG+CD+NN+FAIAVTLNKMS G TG+II
Sbjct: 884 PSGKFGLGFKSCSSKDGTLLGFGHSGMGGSTGYCDINNKFAIAVTLNKMSLGGVTGKIIQ 943
Query: 831 FVCSELNLPVPEDYLRFAEVEHDTPQ-DLGQPLIN 864
F+CSELNLPVPEDY RF+ E Q ++ +PLIN
Sbjct: 944 FICSELNLPVPEDYSRFSGSEKPEEQSNVWRPLIN 978
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255574137|ref|XP_002527984.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis] gi|223532610|gb|EEF34396.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1276 bits (3303), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/861 (72%), Positives = 739/861 (85%), Gaps = 12/861 (1%)
Query: 4 MFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE 63
+F F TPLATASIAQVHRATL++G++VVVKVQH+GIKTIILEDLKNAKSIVDWIAWAE
Sbjct: 117 LFSYFDRTPLATASIAQVHRATLINGQEVVVKVQHEGIKTIILEDLKNAKSIVDWIAWAE 176
Query: 64 PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV 123
PQYDFNP+IDEWCKEAPKELDFN EAENTRIVS+NLGC+NK++DS + A +VDVLIPEV
Sbjct: 177 PQYDFNPMIDEWCKEAPKELDFNIEAENTRIVSSNLGCRNKNKDS--RHANQVDVLIPEV 234
Query: 124 IQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGN 183
IQSSE VLILE+MDGIRLND ESLEA+GV+KQKVVEEITRAYA+QIY+DGFFNGDPHPGN
Sbjct: 235 IQSSEKVLILEYMDGIRLNDLESLEAYGVDKQKVVEEITRAYAYQIYIDGFFNGDPHPGN 294
Query: 184 FLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDV 243
FLVSKDP HRP+LLDFGLTKK+SSS+KQALAKMF A+ EGDHVALLSAFAEMGL+LRLD+
Sbjct: 295 FLVSKDPQHRPVLLDFGLTKKISSSIKQALAKMFLASVEGDHVALLSAFAEMGLKLRLDL 354
Query: 244 PEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFP 303
PEQAMEV+ +FFRTS PANEAFE +K+L+EQR+KN+KVIQEKMKL+QKEVKRFNPVDAFP
Sbjct: 355 PEQAMEVTNVFFRTSTPANEAFENMKSLAEQRSKNMKVIQEKMKLSQKEVKRFNPVDAFP 414
Query: 304 GDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKPIHS 363
GDIVIFSRVLNLLRGLSSTMNVRI+Y +IMRPFAE+ LQ INK P+V+A+WI++ P+HS
Sbjct: 415 GDIVIFSRVLNLLRGLSSTMNVRIIYQEIMRPFAEFALQGNINKGPTVNAQWIHNTPVHS 474
Query: 364 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSV 423
DVE KLR L+ELGN+ KILGIQVCAYKDGEVIIDT+AG+LGRYDPRPVQPDSLFPVFSV
Sbjct: 475 DVETKLRQLLIELGNEDKILGIQVCAYKDGEVIIDTAAGVLGRYDPRPVQPDSLFPVFSV 534
Query: 424 TKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSS 483
TKGITAGMLHWLVDNGK+KL++++ANIWP+F ++GKDLIKV+HVLNHTSGLHN +L
Sbjct: 535 TKGITAGMLHWLVDNGKVKLDDSVANIWPQFGTSGKDLIKVYHVLNHTSGLHNALSNLRE 594
Query: 484 ENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGI 543
ENP+ +C+WDECLN+I LS PETEPG+EQLYHYLSFGWLCGGIIE ASGK+FQEILEE I
Sbjct: 595 ENPMQLCNWDECLNQICLSVPETEPGKEQLYHYLSFGWLCGGIIEHASGKRFQEILEEAI 654
Query: 544 IQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAA 603
I+PL I+GELY+GIPPGVESRLA+L +D +DL+K+ + +RPD LPS+FQP I+QL
Sbjct: 655 IRPLKIEGELYVGIPPGVESRLATLMVDMNDLSKLVEMRSRPD--LPSTFQPSNITQLLT 712
Query: 604 ITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIP 663
PA+FNML +RRA IPAANGHCSARALARYYAALADGG+ PPPHS +KP LGSHPHIP
Sbjct: 713 TVPALFNMLIVRRATIPAANGHCSARALARYYAALADGGLTPPPHSSFTKPALGSHPHIP 772
Query: 664 KFPSHETSKKQKGTKKELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIE 723
KF S +T KKQKG +KE+ K ++ S++ + KDLE G++ D Y RL
Sbjct: 773 KFSSEKTPKKQKGKRKEVTTTSKKRS--SDYSRNHNKDLEEGNN----GNDGYTRLAT-- 824
Query: 724 TSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGLGFKRYN 783
SS+ S DS ++ D + NV +IF +PRIHDAFLGVG+Y +LA+PNG+FGLGF+R +
Sbjct: 825 DGSSSASAADSFASGDGNKRDNVTRIFIDPRIHDAFLGVGEYENLAVPNGKFGLGFRRNS 884
Query: 784 TRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSELNLPVPED 843
+ DGS IGFGHSGMGGSTGFCD+ NRFAIAVT+NK+S G T +I VCSE+N+P+PE+
Sbjct: 885 SNDGSLIGFGHSGMGGSTGFCDIKNRFAIAVTVNKLSVGFVTRKIAELVCSEVNVPLPEE 944
Query: 844 YLRFAEVEHDTPQDLGQPLIN 864
E D ++G+PLIN
Sbjct: 945 LSISGERGPDLELNIGKPLIN 965
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297812683|ref|XP_002874225.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata] gi|297320062|gb|EFH50484.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1244 bits (3219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/868 (69%), Positives = 717/868 (82%), Gaps = 21/868 (2%)
Query: 1 MGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIA 60
M +F DFV+ PLATASIAQVHRATL +G+ VVVKVQH GI+ IILEDLKNAKSIVDWIA
Sbjct: 161 MDVLFTDFVDEPLATASIAQVHRATLANGQDVVVKVQHDGIRAIILEDLKNAKSIVDWIA 220
Query: 61 WAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLI 120
WAEPQY+FNP+IDEWCKEAP+ELDFN EAENTR VS NLGCK +++ + VDVLI
Sbjct: 221 WAEPQYNFNPMIDEWCKEAPRELDFNIEAENTRAVSKNLGCKKTYDEV--RSDNRVDVLI 278
Query: 121 PEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPH 180
P++IQSSE+VLILE+MDGIRLND ESL+AFGV+KQK+VEEITRAYAHQI+VDGFFNGDPH
Sbjct: 279 PDIIQSSESVLILEYMDGIRLNDVESLDAFGVDKQKIVEEITRAYAHQIFVDGFFNGDPH 338
Query: 181 PGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLR 240
PGNFLVSK+P H PILLDFGLTKK+S S+KQALAKMF A+AEGD VALLSAFAEMGL+LR
Sbjct: 339 PGNFLVSKEPQHLPILLDFGLTKKISHSLKQALAKMFLASAEGDQVALLSAFAEMGLKLR 398
Query: 241 LDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVD 300
LD+P+QAM V+ LFFR+S P+NEA +T+K L++QR +N+KVIQEKM+LNQKEVKRFNP+D
Sbjct: 399 LDMPDQAMSVAGLFFRSSTPSNEAMKTLKTLNDQRVQNMKVIQEKMQLNQKEVKRFNPID 458
Query: 301 AFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKP 360
AFPGDIVIF+RV+NLLRGLSSTMNVRIVYLDIMRPFAE VL I++ P+V A WI+ P
Sbjct: 459 AFPGDIVIFARVINLLRGLSSTMNVRIVYLDIMRPFAESVLLGSISRGPTVDAHWIHESP 518
Query: 361 IHSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPV 420
IHSDVE+K+R L ELG+ KILGIQVCAYKDG+VIIDT+AG+LGRYDPRPVQPDSLFPV
Sbjct: 519 IHSDVESKVRKLLAELGSIQKILGIQVCAYKDGKVIIDTAAGVLGRYDPRPVQPDSLFPV 578
Query: 421 FSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVD 480
FSVTKG+TAGM+HWLVD KL+L++ +ANIWP F SNGKD IKV+HVLNHTSG+HN + D
Sbjct: 579 FSVTKGVTAGMIHWLVDKRKLQLDQTVANIWPGFGSNGKDTIKVNHVLNHTSGMHN-AFD 637
Query: 481 LSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILE 540
ENPLLICDWDECL RIA S+PETEPG +Q YHYL+FGWLCGGI+E ASGKKFQEILE
Sbjct: 638 PVGENPLLICDWDECLKRIANSSPETEPGNQQFYHYLTFGWLCGGILEYASGKKFQEILE 697
Query: 541 EGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQ 600
E I++PL IDGELYIGIPPGVESRLA+LT+DTD+++K+S I ++P+ LPS+FQPDKI Q
Sbjct: 698 ESIVKPLKIDGELYIGIPPGVESRLATLTLDTDEMSKLSSIASQPE--LPSTFQPDKILQ 755
Query: 601 LAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHP 660
LA P +FN LN+RRAIIPAANGHCSARALARYYA LADGG+VPPPHS LS+PPLGSH
Sbjct: 756 LATNLPVLFNTLNVRRAIIPAANGHCSARALARYYATLADGGLVPPPHSSLSQPPLGSHT 815
Query: 661 HIPKFPS-HETSKKQKGTKKELLAALKNKTNNSEHGHKYT-KDLEGGSHIRTASGDTYAR 718
H+PKF S +T+KK+K KE+ A K K+ + + Y K ++ ++ AR
Sbjct: 816 HVPKFTSLKDTTKKRKS--KEMAATEKRKSKDHQERRLYDGKQFTSAGSSGESNTESLAR 873
Query: 719 LINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGLG 778
L++ + + T N+D+ Q ++ +F+NP IHDAF+G GDY L +P+G+FGLG
Sbjct: 874 LVDTSSYAGKTEI-----NSDDHQ-HDIHNLFSNPSIHDAFMGAGDYSGLVVPDGKFGLG 927
Query: 779 FKRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSELNL 838
FKR ++DGS +GFGHSGMGGSTGFCD+ NRF+IAVTLNKMS G T +I+ VCSELN+
Sbjct: 928 FKRVISQDGSLVGFGHSGMGGSTGFCDIKNRFSIAVTLNKMSMGGVTAKIVKLVCSELNI 987
Query: 839 PVPEDYLRFAEVEHDTPQD--LGQPLIN 864
P+P+D+ + DT D +G PLIN
Sbjct: 988 PLPKDF----SLSTDTGPDSQMGTPLIN 1011
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224115612|ref|XP_002332099.1| predicted protein [Populus trichocarpa] gi|222874919|gb|EEF12050.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1242 bits (3214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/878 (70%), Positives = 723/878 (82%), Gaps = 24/878 (2%)
Query: 4 MFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE 63
+F+DF E PLATASIAQVHRATL+DG++VVVKVQH+ IK IILEDLK+AKSIVDWIAWAE
Sbjct: 117 IFLDFDENPLATASIAQVHRATLIDGQKVVVKVQHEDIKKIILEDLKDAKSIVDWIAWAE 176
Query: 64 PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV 123
PQY+F+P+IDEWCKEAP+ELDFN EAENTR VS NLGC +K+ DSNK P +VDVLIPEV
Sbjct: 177 PQYNFSPMIDEWCKEAPQELDFNHEAENTRTVSRNLGCTSKY-DSNK-PINQVDVLIPEV 234
Query: 124 IQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGN 183
IQS+E VLILE+MDGIRLND ESLEA G N QK+VEEITRA+AHQIYVDGFFNGDPHPGN
Sbjct: 235 IQSTEKVLILEYMDGIRLNDFESLEACGANNQKIVEEITRAFAHQIYVDGFFNGDPHPGN 294
Query: 184 FLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDV 243
FLVSK+PPHRPILLDFGLTK++SSSMKQ+LAKMF A AEGDHVALLS+F+EMGL+LRLD
Sbjct: 295 FLVSKEPPHRPILLDFGLTKRISSSMKQSLAKMFLATAEGDHVALLSSFSEMGLKLRLDF 354
Query: 244 PEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNP----- 298
PEQAM+ ++FFRTS A+EA E K+L EQRA+N+KV+QEKM L+QKEVKRFNP
Sbjct: 355 PEQAMDFISVFFRTSTSASEAAEYAKSLGEQRARNMKVLQEKMNLSQKEVKRFNPASPSI 414
Query: 299 --------VDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPS 350
+DAFPGD+VIFSRV+ LLRGLS+T++ RIVY D+MRPFAE VLQ I K PS
Sbjct: 415 TLFYFYQYIDAFPGDMVIFSRVIGLLRGLSTTLDARIVYHDVMRPFAESVLQDKIAKGPS 474
Query: 351 VSAEWIYSKPIHSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPR 410
+A+WI P+HSDVEAKLR LVELGND KILGIQVCAYKDGEVIIDT+AG+LGRYDPR
Sbjct: 475 DNAQWINDTPVHSDVEAKLRQILVELGNDDKILGIQVCAYKDGEVIIDTAAGVLGRYDPR 534
Query: 411 PVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNH 470
PVQPDSLFPVFSVTKGI AGMLHWLVDNGKL L ENIANIWPEF +NGK+LIKVHHVLNH
Sbjct: 535 PVQPDSLFPVFSVTKGIAAGMLHWLVDNGKLNLNENIANIWPEFGTNGKNLIKVHHVLNH 594
Query: 471 TSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERA 530
TSGL N +L ENPLL+ DWDECL RIA+SAPETEPGQEQLYHYLSFGWLCGGIIE A
Sbjct: 595 TSGLQNALANLREENPLLMADWDECLKRIAMSAPETEPGQEQLYHYLSFGWLCGGIIEHA 654
Query: 531 SGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLP 590
SGKKFQEILEE I++PL+I+GELY+GIPPGVESRLASLT+D DD +K+S I +RP+ P
Sbjct: 655 SGKKFQEILEEAIVRPLNIEGELYVGIPPGVESRLASLTLDKDDFSKLSKIASRPE--FP 712
Query: 591 SSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSR 650
S+FQP+ ISQL PA+FNMLN+RRAIIP ANGHCSARALARYYAAL DGG+VPPPHS
Sbjct: 713 STFQPENISQLVTAVPALFNMLNVRRAIIPGANGHCSARALARYYAALVDGGLVPPPHSS 772
Query: 651 LSKPPLGSHPHIPKFPSHETSKKQKGTKKELL-AALKNKTNNSEHGHKYTKDLEGGSHIR 709
LS PPLG+HPHIPKFPS TSKKQKG K + +A K K N E ++ D + G
Sbjct: 773 LSMPPLGTHPHIPKFPSEITSKKQKGKKIKAAGSASKKKGNGYELKMNHSNDFKDGGE-- 830
Query: 710 TASGDTYARLINIETSSSNTSTT---DSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYG 766
++ D Y RL N SS++S + ++ + +N KIFNNPRIHD F+GVG+Y
Sbjct: 831 -SNSDGYTRLANDSAGSSSSSDASPPKGFAASENSRQNNANKIFNNPRIHDEFMGVGEYR 889
Query: 767 DLALPNGRFGLGFKRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTG 826
+L LPNG+FGLGF+R+++ DGS+ GFGHSGMGGSTGFCD+ NRFAIAVTLNKMS G T
Sbjct: 890 NLVLPNGKFGLGFRRFSSSDGSFYGFGHSGMGGSTGFCDIKNRFAIAVTLNKMSLGTATR 949
Query: 827 RIIHFVCSELNLPVPEDYLRFAEVEHDTPQDLGQPLIN 864
RI+ FVCSELN+P+P+++ +E D + +PLIN
Sbjct: 950 RIVQFVCSELNVPLPDEFAVLSETAPDEELSIARPLIN 987
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18420844|ref|NP_568458.1| ABC1 family protein [Arabidopsis thaliana] gi|16649083|gb|AAL24393.1| Unknown protein [Arabidopsis thaliana] gi|33589758|gb|AAQ22645.1| At5g24810/F6A4.20 [Arabidopsis thaliana] gi|332005981|gb|AED93364.1| ABC1 family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1239 bits (3205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/865 (68%), Positives = 718/865 (83%), Gaps = 17/865 (1%)
Query: 1 MGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIA 60
M +F DFV+ PLATASIAQVHRATL +G+ VVVKVQH GI+ IILEDLKNAKSIVDWIA
Sbjct: 161 MDVLFTDFVDEPLATASIAQVHRATLANGQDVVVKVQHDGIRAIILEDLKNAKSIVDWIA 220
Query: 61 WAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLI 120
WAEPQY+FNP+IDEWCKEAP+ELDFN EAENTR VS NLGCK +++ + A VDVLI
Sbjct: 221 WAEPQYNFNPMIDEWCKEAPRELDFNIEAENTRTVSGNLGCKKTNDEV--RSANRVDVLI 278
Query: 121 PEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPH 180
P++IQSSE+VLILE+MDG+RLND ESL+AFGV+KQK+VEEITRAYAHQI+VDGFFNGDPH
Sbjct: 279 PDIIQSSESVLILEYMDGVRLNDVESLDAFGVDKQKIVEEITRAYAHQIFVDGFFNGDPH 338
Query: 181 PGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLR 240
PGNFLVSK+P HRPILLDFGL+KK+S S+KQALAKMF A+AEGD VALLSAFAEMGL+LR
Sbjct: 339 PGNFLVSKEPQHRPILLDFGLSKKISHSLKQALAKMFLASAEGDQVALLSAFAEMGLKLR 398
Query: 241 LDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVD 300
LD+P+QAM V+ LFFR+S P++EA +T K L++QR +N+KVIQEKM+LNQKEVKRFNP+D
Sbjct: 399 LDMPDQAMSVAGLFFRSSTPSSEAMKTFKTLNDQRVQNMKVIQEKMQLNQKEVKRFNPID 458
Query: 301 AFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKP 360
AFPGDIVIF+RV+NLLRGLSSTMNVRIVYLDIMRPFAE VL I++ P+V A WI+ P
Sbjct: 459 AFPGDIVIFARVINLLRGLSSTMNVRIVYLDIMRPFAESVLLGSISRGPTVDAHWIHDSP 518
Query: 361 IHSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPV 420
IHSDVE+K+R L ELG+ KILGIQVCAYKDG+VIIDT+AG+LGRYDPRPVQPDSLFPV
Sbjct: 519 IHSDVESKVRKLLAELGSIQKILGIQVCAYKDGKVIIDTAAGVLGRYDPRPVQPDSLFPV 578
Query: 421 FSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVD 480
FSVTKG+TAGM+HWLVD KL+L++ +AN+WP F SNGKD IKVHHVLNHTSG+ N S D
Sbjct: 579 FSVTKGVTAGMIHWLVDKRKLQLDQTVANMWPGFGSNGKDTIKVHHVLNHTSGMQN-SFD 637
Query: 481 LSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILE 540
ENPLLICDWDECL RIA S+PETEPG +Q YHYL+FGWLCGGI+E ASGKK QEILE
Sbjct: 638 PVGENPLLICDWDECLKRIANSSPETEPGSQQSYHYLTFGWLCGGILEYASGKKLQEILE 697
Query: 541 EGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQ 600
E I++PL+IDGELYIGIPPGVESRLA+LT DTD+++K+S I ++P+ LPS+FQPDKI Q
Sbjct: 698 ESIVKPLNIDGELYIGIPPGVESRLATLTFDTDEMSKLSSIASQPE--LPSTFQPDKIIQ 755
Query: 601 LAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHP 660
+A P +FN LN+RRAIIPAANGHCSARALARYYA LADGG+VPPPHS LS+PPLGSH
Sbjct: 756 MATNLPVLFNTLNVRRAIIPAANGHCSARALARYYATLADGGLVPPPHSSLSQPPLGSHT 815
Query: 661 HIPKFPSHETSKKQKGTKKELLAALKNKTNNSEHGHKY-TKDLEGGSHIRTASGDTYARL 719
H+PKF S + + K+K KE+ A K K+ + + Y K S R ++ ++ ARL
Sbjct: 816 HVPKFTSLKDTTKKK-KGKEMAATEKGKSKDHQERKLYDEKQFMSASSSRESNTESLARL 874
Query: 720 INIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGLGF 779
++ +S+ T N+D+ Q ++ +F+NPRIHDAF+G GDY L +P+G+FGLGF
Sbjct: 875 VDTNSSAGKTEI-----NSDDHQ-HDIHNMFSNPRIHDAFMGAGDYSGLVVPDGKFGLGF 928
Query: 780 KRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSELNLP 839
KR ++DGS +GFGHSG+GGSTGFCD+NNRF+IAVTLNKMS G T I+ VCSELN+P
Sbjct: 929 KRAISQDGSLVGFGHSGLGGSTGFCDINNRFSIAVTLNKMSMGGVTANIVKLVCSELNIP 988
Query: 840 VPEDYLRFAEVEHDTPQDLGQPLIN 864
+P+D+ ++ D+ +G PLIN
Sbjct: 989 LPKDFA--TDIGADS--QMGTPLIN 1009
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334187920|ref|NP_001190388.1| ABC1 family protein [Arabidopsis thaliana] gi|332005982|gb|AED93365.1| ABC1 family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1238 bits (3204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/865 (68%), Positives = 718/865 (83%), Gaps = 17/865 (1%)
Query: 1 MGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIA 60
M +F DFV+ PLATASIAQVHRATL +G+ VVVKVQH GI+ IILEDLKNAKSIVDWIA
Sbjct: 192 MDVLFTDFVDEPLATASIAQVHRATLANGQDVVVKVQHDGIRAIILEDLKNAKSIVDWIA 251
Query: 61 WAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLI 120
WAEPQY+FNP+IDEWCKEAP+ELDFN EAENTR VS NLGCK +++ + A VDVLI
Sbjct: 252 WAEPQYNFNPMIDEWCKEAPRELDFNIEAENTRTVSGNLGCKKTNDEV--RSANRVDVLI 309
Query: 121 PEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPH 180
P++IQSSE+VLILE+MDG+RLND ESL+AFGV+KQK+VEEITRAYAHQI+VDGFFNGDPH
Sbjct: 310 PDIIQSSESVLILEYMDGVRLNDVESLDAFGVDKQKIVEEITRAYAHQIFVDGFFNGDPH 369
Query: 181 PGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLR 240
PGNFLVSK+P HRPILLDFGL+KK+S S+KQALAKMF A+AEGD VALLSAFAEMGL+LR
Sbjct: 370 PGNFLVSKEPQHRPILLDFGLSKKISHSLKQALAKMFLASAEGDQVALLSAFAEMGLKLR 429
Query: 241 LDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVD 300
LD+P+QAM V+ LFFR+S P++EA +T K L++QR +N+KVIQEKM+LNQKEVKRFNP+D
Sbjct: 430 LDMPDQAMSVAGLFFRSSTPSSEAMKTFKTLNDQRVQNMKVIQEKMQLNQKEVKRFNPID 489
Query: 301 AFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKP 360
AFPGDIVIF+RV+NLLRGLSSTMNVRIVYLDIMRPFAE VL I++ P+V A WI+ P
Sbjct: 490 AFPGDIVIFARVINLLRGLSSTMNVRIVYLDIMRPFAESVLLGSISRGPTVDAHWIHDSP 549
Query: 361 IHSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPV 420
IHSDVE+K+R L ELG+ KILGIQVCAYKDG+VIIDT+AG+LGRYDPRPVQPDSLFPV
Sbjct: 550 IHSDVESKVRKLLAELGSIQKILGIQVCAYKDGKVIIDTAAGVLGRYDPRPVQPDSLFPV 609
Query: 421 FSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVD 480
FSVTKG+TAGM+HWLVD KL+L++ +AN+WP F SNGKD IKVHHVLNHTSG+ N S D
Sbjct: 610 FSVTKGVTAGMIHWLVDKRKLQLDQTVANMWPGFGSNGKDTIKVHHVLNHTSGMQN-SFD 668
Query: 481 LSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILE 540
ENPLLICDWDECL RIA S+PETEPG +Q YHYL+FGWLCGGI+E ASGKK QEILE
Sbjct: 669 PVGENPLLICDWDECLKRIANSSPETEPGSQQSYHYLTFGWLCGGILEYASGKKLQEILE 728
Query: 541 EGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQ 600
E I++PL+IDGELYIGIPPGVESRLA+LT DTD+++K+S I ++P+ LPS+FQPDKI Q
Sbjct: 729 ESIVKPLNIDGELYIGIPPGVESRLATLTFDTDEMSKLSSIASQPE--LPSTFQPDKIIQ 786
Query: 601 LAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHP 660
+A P +FN LN+RRAIIPAANGHCSARALARYYA LADGG+VPPPHS LS+PPLGSH
Sbjct: 787 MATNLPVLFNTLNVRRAIIPAANGHCSARALARYYATLADGGLVPPPHSSLSQPPLGSHT 846
Query: 661 HIPKFPSHETSKKQKGTKKELLAALKNKTNNSEHGHKY-TKDLEGGSHIRTASGDTYARL 719
H+PKF S + + K+K KE+ A K K+ + + Y K S R ++ ++ ARL
Sbjct: 847 HVPKFTSLKDTTKKK-KGKEMAATEKGKSKDHQERKLYDEKQFMSASSSRESNTESLARL 905
Query: 720 INIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGLGF 779
++ +S+ T N+D+ Q ++ +F+NPRIHDAF+G GDY L +P+G+FGLGF
Sbjct: 906 VDTNSSAGKTEI-----NSDDHQ-HDIHNMFSNPRIHDAFMGAGDYSGLVVPDGKFGLGF 959
Query: 780 KRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSELNLP 839
KR ++DGS +GFGHSG+GGSTGFCD+NNRF+IAVTLNKMS G T I+ VCSELN+P
Sbjct: 960 KRAISQDGSLVGFGHSGLGGSTGFCDINNRFSIAVTLNKMSMGGVTANIVKLVCSELNIP 1019
Query: 840 VPEDYLRFAEVEHDTPQDLGQPLIN 864
+P+D+ ++ D+ +G PLIN
Sbjct: 1020 LPKDFA--TDIGADS--QMGTPLIN 1040
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224121392|ref|XP_002330816.1| predicted protein [Populus trichocarpa] gi|222872618|gb|EEF09749.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1217 bits (3150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/845 (72%), Positives = 708/845 (83%), Gaps = 5/845 (0%)
Query: 1 MGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIA 60
M +F+DF E LATASIAQVHRATL+DGR+VVVKVQH+ IK IILEDLK+AKSIVDWIA
Sbjct: 112 MKEIFLDFDENSLATASIAQVHRATLIDGREVVVKVQHEDIKAIILEDLKDAKSIVDWIA 171
Query: 61 WAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLI 120
WAEPQY+FNP+IDEWCKE PKELDFN EAENTR VS NLGC NK++ + K +VDVLI
Sbjct: 172 WAEPQYNFNPMIDEWCKETPKELDFNHEAENTRTVSKNLGCTNKYD--SDKSINQVDVLI 229
Query: 121 PEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPH 180
PEVIQS+E VLILE+MDGIRLND ESLEA G NKQK+VEEITRAYAHQIYVDGFFNGDPH
Sbjct: 230 PEVIQSTEKVLILEYMDGIRLNDLESLEACGANKQKIVEEITRAYAHQIYVDGFFNGDPH 289
Query: 181 PGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLR 240
GNFLVSK+PPHRPILLDFG TKK+SSSMKQ+LAKMF A AEGDHVALLS+FAEMGL+LR
Sbjct: 290 TGNFLVSKEPPHRPILLDFGFTKKISSSMKQSLAKMFLATAEGDHVALLSSFAEMGLKLR 349
Query: 241 LDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVD 300
LD+PEQAM+V+++FFR S PANEA E K L+EQR +N+KV+QEKM L+QKEVKRFNP+D
Sbjct: 350 LDLPEQAMDVTSIFFRASTPANEAAEYAKTLNEQRTRNMKVLQEKMNLSQKEVKRFNPID 409
Query: 301 AFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKP 360
AFPGD+VIFSRV+NLLRGLSST+N RIVY DIMRPFAE VLQ I K PS +A+WIY P
Sbjct: 410 AFPGDMVIFSRVVNLLRGLSSTLNARIVYQDIMRPFAESVLQEKIAKGPSANAQWIYDTP 469
Query: 361 IHSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPV 420
+HS+VEAKLR LVELGN+ KILGIQVCAYKDG+VIIDT+AG+LGRYDPRPVQPDSLF V
Sbjct: 470 VHSEVEAKLRQILVELGNEDKILGIQVCAYKDGKVIIDTAAGVLGRYDPRPVQPDSLFSV 529
Query: 421 FSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVD 480
FSVTKGITAGMLHWLVDNGKL L+E+IANIWPEF +NGK+LIKVHHVLNHT+GL N +
Sbjct: 530 FSVTKGITAGMLHWLVDNGKLNLDESIANIWPEFGTNGKNLIKVHHVLNHTAGLQNALDN 589
Query: 481 LSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILE 540
L ENPLL+ DWDECL +IA+S PETEPGQ QLYH+LSFGWLCGGIIE ASGKKFQEILE
Sbjct: 590 LRKENPLLLTDWDECLKQIAMSEPETEPGQVQLYHFLSFGWLCGGIIEHASGKKFQEILE 649
Query: 541 EGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQ 600
E ++PL+I+GELY+GIPPGVESRLASLTID DD +K+S I + LPS+FQP+ ISQ
Sbjct: 650 EAFVRPLNIEGELYVGIPPGVESRLASLTIDKDDFSKLSKIGSLS--ALPSTFQPENISQ 707
Query: 601 LAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHP 660
L A+ NMLNIRRAIIPAANGHCSARALARYYAAL D G+VPPPHS LS PPLGSHP
Sbjct: 708 LVTTLLALSNMLNIRRAIIPAANGHCSARALARYYAALVDRGLVPPPHSSLSTPPLGSHP 767
Query: 661 HIPKFPSHETSKKQKGTK-KELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARL 719
HIPKF S TSK Q G K K + +A K K N E K +KD + R ++ D Y
Sbjct: 768 HIPKFSSEITSKMQNGKKSKAVGSASKKKENGYEQKTKQSKDSKDNGSGRESNSDGYTST 827
Query: 720 INIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGLGF 779
++ + +S +S +++++ + +NV IFN+PRIHD F+G G+Y DL LPNG+FGLGF
Sbjct: 828 SGSSSARNTSSPDNSSASSNDSRKNNVIWIFNDPRIHDQFMGTGEYSDLVLPNGKFGLGF 887
Query: 780 KRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSELNLP 839
KR+++ DGS+ GFGHSG+GGSTGFCD+ NRFAIAVTLNK+SFG T +II FVCSELN+P
Sbjct: 888 KRFSSSDGSFSGFGHSGLGGSTGFCDIENRFAIAVTLNKISFGTATRKIIQFVCSELNVP 947
Query: 840 VPEDY 844
+P+++
Sbjct: 948 LPDEF 952
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356552616|ref|XP_003544660.1| PREDICTED: uncharacterized protein LOC100802638 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1217 bits (3148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 611/870 (70%), Positives = 716/870 (82%), Gaps = 24/870 (2%)
Query: 1 MGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIA 60
M +F DFV PLATASIAQVHRATL++G +VVVKVQH GIKTIILEDLKNAKSIVDWIA
Sbjct: 114 MDELFADFVNKPLATASIAQVHRATLLNGHEVVVKVQHDGIKTIILEDLKNAKSIVDWIA 173
Query: 61 WAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLI 120
WAEPQY+FNP+IDEWCKEAPKELDFN EAENTR V+ NLGC+N++ D N + A VDVLI
Sbjct: 174 WAEPQYNFNPMIDEWCKEAPKELDFNHEAENTRTVAKNLGCRNQY-DGNMR-ANRVDVLI 231
Query: 121 PEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPH 180
P+VIQS+E VL+LE+MDGIRLND ESLEA+GV+KQK+VEEITRAYAHQIY+DGFFNGDPH
Sbjct: 232 PDVIQSTEKVLVLEYMDGIRLNDLESLEAYGVDKQKLVEEITRAYAHQIYIDGFFNGDPH 291
Query: 181 PGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLR 240
PGNFLVSK+ PHRPILLDFGLTKKLSS++KQALAKMF A+AEGDHVALLSAFAEMGL+LR
Sbjct: 292 PGNFLVSKESPHRPILLDFGLTKKLSSTIKQALAKMFLASAEGDHVALLSAFAEMGLKLR 351
Query: 241 LDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVD 300
LD+PEQAMEV+ +FFR + PANE +T+K+L++QR +N+KVIQEKM L++KE+KRFNPVD
Sbjct: 352 LDIPEQAMEVTAVFFRATTPANEYHKTMKSLADQRDRNMKVIQEKMNLDKKEMKRFNPVD 411
Query: 301 AFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKP 360
AFPGDIVIF RVLNLLRGLSSTMNV+IVY+DIMRPFAE VL+ I+K PSV+ WI+ P
Sbjct: 412 AFPGDIVIFGRVLNLLRGLSSTMNVQIVYMDIMRPFAESVLRGYISKGPSVNDRWIFDSP 471
Query: 361 IHSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPV 420
+HSDVE+ LR L+E+GN+ KILGIQVCAYKDGEVIIDT+AG+LG+YDPRPV+PDSLFPV
Sbjct: 472 VHSDVESMLRQLLIEMGNNDKILGIQVCAYKDGEVIIDTAAGVLGKYDPRPVKPDSLFPV 531
Query: 421 FSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVD 480
FSVTKGITAGM+HWLVDNG+L LEEN+ANIWP F SNGKD+IKVHHVLNHTSGLHN
Sbjct: 532 FSVTKGITAGMIHWLVDNGQLNLEENVANIWPAFGSNGKDVIKVHHVLNHTSGLHNAMGS 591
Query: 481 LSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILE 540
++ E+PLL+ DWD CLNRI S PETEPG+EQ YHYLSFGWLCGGIIE ASGKKFQEILE
Sbjct: 592 IAQEDPLLMFDWDGCLNRICQSVPETEPGKEQFYHYLSFGWLCGGIIEHASGKKFQEILE 651
Query: 541 EGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQ 600
E I++PL I+GELY+GIPPGVESRLA+LT+DT DL+KVS + NRPD LPS+FQP +I+Q
Sbjct: 652 EAIVRPLHIEGELYVGIPPGVESRLAALTVDTADLSKVSALANRPD--LPSTFQPQQIAQ 709
Query: 601 LAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHP 660
LA P FN LN+RRAIIPAANGH SARALARYYAALADGG +PPPHS SKP LGSHP
Sbjct: 710 LATSLPVAFNTLNVRRAIIPAANGHVSARALARYYAALADGGKIPPPHSSASKPVLGSHP 769
Query: 661 HIPKF---PSHETSKKQKGTKKELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYA 717
HIPK P ++K G +K+ + + TN+ E Y S
Sbjct: 770 HIPKLSSSPKPPKTRKCIGRRKQATSTSVSTTNSYEKVSSYDD-----------SEANKG 818
Query: 718 RLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGL 777
R N E+SS + +++ ISN +S K++ NPRI D FLG G+Y +LALP FGL
Sbjct: 819 RNTNSESSSGDDASSSRISNN--LRSHVAGKVYKNPRIIDEFLGTGEYTNLALPGEGFGL 876
Query: 778 GFKRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSELN 837
GFKR+ ++DGS I FGHSGMGGSTGFCDV N F+IAVTLNKMSFG TG+I+ VCSELN
Sbjct: 877 GFKRFTSKDGSSIAFGHSGMGGSTGFCDVTNNFSIAVTLNKMSFGGVTGKIVQLVCSELN 936
Query: 838 LPVPEDYLRFAEVEHDTPQD---LGQPLIN 864
+PVP+D+LRFA VE P + +G+P+IN
Sbjct: 937 IPVPDDFLRFA-VEQSGPDEQLSMGRPIIN 965
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356563713|ref|XP_003550104.1| PREDICTED: uncharacterized protein LOC100775929 isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1215 bits (3144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/871 (69%), Positives = 715/871 (82%), Gaps = 25/871 (2%)
Query: 1 MGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIA 60
M +F DFV PLATASIAQVHRATL++G +VVVKVQH GIKTIILEDLKNAKSIVDWIA
Sbjct: 142 MDELFADFVNEPLATASIAQVHRATLLNGLEVVVKVQHDGIKTIILEDLKNAKSIVDWIA 201
Query: 61 WAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLI 120
WAEPQY+FNP+IDEWCKEAPKELDFN EAENTR V+ NLGC+N++ D N A VDVLI
Sbjct: 202 WAEPQYNFNPMIDEWCKEAPKELDFNHEAENTRTVAKNLGCRNQY-DGNMS-ANRVDVLI 259
Query: 121 PEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPH 180
P+VIQS+E VL+LE+MDGIRLND ESL+A+GV+KQK+VEEITRAYAHQIYVDGFFNGDPH
Sbjct: 260 PDVIQSTEKVLVLEYMDGIRLNDLESLDAYGVDKQKLVEEITRAYAHQIYVDGFFNGDPH 319
Query: 181 PGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLR 240
PGNFLVSK+ PHRPILLDFGLTKKLSS++KQALAKMF A+AEGDHVALLSAFAEMGL+LR
Sbjct: 320 PGNFLVSKESPHRPILLDFGLTKKLSSTIKQALAKMFLASAEGDHVALLSAFAEMGLKLR 379
Query: 241 LDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVD 300
LD+PEQAMEV+T+FFR + PANE +T+K+L++QR +N+KVIQEKM L++KE+KRFNPVD
Sbjct: 380 LDIPEQAMEVTTVFFRATTPANEYHKTMKSLADQRDRNMKVIQEKMNLDKKEMKRFNPVD 439
Query: 301 AFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKP 360
AFPGDIVIF RVLNLLRGLSSTMNVRIVY+DIMRPFAE VL I+K PS++ WI+ P
Sbjct: 440 AFPGDIVIFGRVLNLLRGLSSTMNVRIVYMDIMRPFAESVLSGYISKGPSLNDRWIFDSP 499
Query: 361 IHSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPV 420
+HSDVE+KLR L+E+GN+ KILGIQVCAYKDGE IIDT+AG+LG+YDPRPVQPDSLFPV
Sbjct: 500 VHSDVESKLRQLLIEMGNNDKILGIQVCAYKDGEAIIDTAAGVLGKYDPRPVQPDSLFPV 559
Query: 421 FSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVD 480
FSVTKGITAGM+HWLVDNG+L LEEN+A IWP F+SNGKD+IKVHHVLNHTSGLHN
Sbjct: 560 FSVTKGITAGMIHWLVDNGQLNLEENVATIWPAFRSNGKDVIKVHHVLNHTSGLHNAMGG 619
Query: 481 LSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILE 540
++ E+PLL+ DWD CLNRI S PETEPG+EQ YHYLSFGWLCGGIIE ASGKKFQEILE
Sbjct: 620 IAQEDPLLMLDWDGCLNRICQSIPETEPGKEQFYHYLSFGWLCGGIIEHASGKKFQEILE 679
Query: 541 EGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQ 600
E I++PL I+GELY+GIPPGVESRLA+LT+DT +L+K+S + NR D LPS+FQP +I+Q
Sbjct: 680 EAIVRPLHIEGELYVGIPPGVESRLAALTVDTAELSKISALANRAD--LPSTFQPQQIAQ 737
Query: 601 LAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHP 660
LA P FN LN+RRAIIPAANGH SARALARYYAALADGG +PPPHS SKP LGSHP
Sbjct: 738 LATTLPVAFNTLNVRRAIIPAANGHVSARALARYYAALADGGKIPPPHSSASKPVLGSHP 797
Query: 661 HIPKFPSHE----TSKKQKGTKKELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTY 716
HIPK S + ++K G + + + + TN+ E + +D +
Sbjct: 798 HIPKLSSSQKPPIKNRKCIGRRTQATSPSVSTTNSYEKVSSH-EDFDANE---------- 846
Query: 717 ARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFG 776
R N E+SS ++ I N ++ RK++ NPRI D FLG G+Y +LALP FG
Sbjct: 847 GRNTNSESSSGGDDSSSRIGNN--LRTHVARKVYKNPRIIDEFLGTGEYENLALPGESFG 904
Query: 777 LGFKRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSEL 836
LGFKR++++DGS I FGHSGMGGSTGFCDV N F++AVTLNKMSFG TG+I+ VCSEL
Sbjct: 905 LGFKRFSSKDGSSIAFGHSGMGGSTGFCDVTNNFSVAVTLNKMSFGGVTGKIVQLVCSEL 964
Query: 837 NLPVPEDYLRFAEVEHDTPQD---LGQPLIN 864
N+PVP+D+LRFA VE P + +G+P+IN
Sbjct: 965 NIPVPDDFLRFA-VEQSGPDEQLSMGRPIIN 994
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356563711|ref|XP_003550103.1| PREDICTED: uncharacterized protein LOC100775929 isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1215 bits (3143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/871 (69%), Positives = 715/871 (82%), Gaps = 25/871 (2%)
Query: 1 MGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIA 60
M +F DFV PLATASIAQVHRATL++G +VVVKVQH GIKTIILEDLKNAKSIVDWIA
Sbjct: 114 MDELFADFVNEPLATASIAQVHRATLLNGLEVVVKVQHDGIKTIILEDLKNAKSIVDWIA 173
Query: 61 WAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLI 120
WAEPQY+FNP+IDEWCKEAPKELDFN EAENTR V+ NLGC+N++ D N A VDVLI
Sbjct: 174 WAEPQYNFNPMIDEWCKEAPKELDFNHEAENTRTVAKNLGCRNQY-DGNMS-ANRVDVLI 231
Query: 121 PEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPH 180
P+VIQS+E VL+LE+MDGIRLND ESL+A+GV+KQK+VEEITRAYAHQIYVDGFFNGDPH
Sbjct: 232 PDVIQSTEKVLVLEYMDGIRLNDLESLDAYGVDKQKLVEEITRAYAHQIYVDGFFNGDPH 291
Query: 181 PGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLR 240
PGNFLVSK+ PHRPILLDFGLTKKLSS++KQALAKMF A+AEGDHVALLSAFAEMGL+LR
Sbjct: 292 PGNFLVSKESPHRPILLDFGLTKKLSSTIKQALAKMFLASAEGDHVALLSAFAEMGLKLR 351
Query: 241 LDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVD 300
LD+PEQAMEV+T+FFR + PANE +T+K+L++QR +N+KVIQEKM L++KE+KRFNPVD
Sbjct: 352 LDIPEQAMEVTTVFFRATTPANEYHKTMKSLADQRDRNMKVIQEKMNLDKKEMKRFNPVD 411
Query: 301 AFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKP 360
AFPGDIVIF RVLNLLRGLSSTMNVRIVY+DIMRPFAE VL I+K PS++ WI+ P
Sbjct: 412 AFPGDIVIFGRVLNLLRGLSSTMNVRIVYMDIMRPFAESVLSGYISKGPSLNDRWIFDSP 471
Query: 361 IHSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPV 420
+HSDVE+KLR L+E+GN+ KILGIQVCAYKDGE IIDT+AG+LG+YDPRPVQPDSLFPV
Sbjct: 472 VHSDVESKLRQLLIEMGNNDKILGIQVCAYKDGEAIIDTAAGVLGKYDPRPVQPDSLFPV 531
Query: 421 FSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVD 480
FSVTKGITAGM+HWLVDNG+L LEEN+A IWP F+SNGKD+IKVHHVLNHTSGLHN
Sbjct: 532 FSVTKGITAGMIHWLVDNGQLNLEENVATIWPAFRSNGKDVIKVHHVLNHTSGLHNAMGG 591
Query: 481 LSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILE 540
++ E+PLL+ DWD CLNRI S PETEPG+EQ YHYLSFGWLCGGIIE ASGKKFQEILE
Sbjct: 592 IAQEDPLLMLDWDGCLNRICQSIPETEPGKEQFYHYLSFGWLCGGIIEHASGKKFQEILE 651
Query: 541 EGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQ 600
E I++PL I+GELY+GIPPGVESRLA+LT+DT +L+K+S + NR D LPS+FQP +I+Q
Sbjct: 652 EAIVRPLHIEGELYVGIPPGVESRLAALTVDTAELSKISALANRAD--LPSTFQPQQIAQ 709
Query: 601 LAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHP 660
LA P FN LN+RRAIIPAANGH SARALARYYAALADGG +PPPHS SKP LGSHP
Sbjct: 710 LATTLPVAFNTLNVRRAIIPAANGHVSARALARYYAALADGGKIPPPHSSASKPVLGSHP 769
Query: 661 HIPKFPSHE----TSKKQKGTKKELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTY 716
HIPK S + ++K G + + + + TN+ E + +D +
Sbjct: 770 HIPKLSSSQKPPIKNRKCIGRRTQATSPSVSTTNSYEKVSSH-EDFDANE---------- 818
Query: 717 ARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFG 776
R N E+SS ++ I N ++ RK++ NPRI D FLG G+Y +LALP FG
Sbjct: 819 GRNTNSESSSGGDDSSSRIGNN--LRTHVARKVYKNPRIIDEFLGTGEYENLALPGESFG 876
Query: 777 LGFKRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSEL 836
LGFKR++++DGS I FGHSGMGGSTGFCDV N F++AVTLNKMSFG TG+I+ VCSEL
Sbjct: 877 LGFKRFSSKDGSSIAFGHSGMGGSTGFCDVTNNFSVAVTLNKMSFGGVTGKIVQLVCSEL 936
Query: 837 NLPVPEDYLRFAEVEHDTPQD---LGQPLIN 864
N+PVP+D+LRFA VE P + +G+P+IN
Sbjct: 937 NIPVPDDFLRFA-VEQSGPDEQLSMGRPIIN 966
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 864 | ||||||
| UNIPROTKB|Q9UIE6 | 455 | ADCK1 "Uncharacterized aarF do | 0.226 | 0.430 | 0.366 | 2.9e-26 | |
| TAIR|locus:2177487 | 479 | AT5G50330 [Arabidopsis thalian | 0.289 | 0.521 | 0.317 | 6.1e-26 | |
| TAIR|locus:2177719 | 761 | ATH13 "AT5G64940" [Arabidopsis | 0.376 | 0.427 | 0.281 | 7.5e-26 | |
| UNIPROTKB|Q86TW2 | 530 | ADCK1 "Uncharacterized aarF do | 0.226 | 0.369 | 0.366 | 1.3e-25 | |
| UNIPROTKB|F1SE04 | 455 | ADCK1 "Uncharacterized protein | 0.226 | 0.430 | 0.352 | 1.3e-24 | |
| UNIPROTKB|F1N2C7 | 580 | F1N2C7 "Uncharacterized protei | 0.269 | 0.401 | 0.32 | 2.3e-24 | |
| TAIR|locus:2009764 | 551 | AT1G65950 [Arabidopsis thalian | 0.234 | 0.368 | 0.345 | 2.7e-24 | |
| UNIPROTKB|Q5ZMT7 | 519 | ADCK1 "Uncharacterized aarF do | 0.243 | 0.404 | 0.334 | 3.4e-24 | |
| UNIPROTKB|E2RSN4 | 513 | ADCK1 "Uncharacterized protein | 0.226 | 0.382 | 0.357 | 4.2e-24 | |
| ZFIN|ZDB-GENE-080401-5 | 521 | adck1 "aarF domain containing | 0.246 | 0.408 | 0.317 | 4.5e-24 |
| UNIPROTKB|Q9UIE6 ADCK1 "Uncharacterized aarF domain-containing protein kinase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 319 (117.4 bits), Expect = 2.9e-26, P = 2.9e-26
Identities = 77/210 (36%), Positives = 118/210 (56%)
Query: 4 MFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE 63
+F F +TPL TAS+AQVH+A L DGR V VKVQH ++ +D+ + +V +
Sbjct: 77 LFQSFDDTPLGTASLAQVHKAVLHDGRTVAVKVQHPKVRAQSSKDILLMEVLVLAVKQLF 136
Query: 64 PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV 123
P+++F ++DE K P ELDF +E N VS L +H D K P D+
Sbjct: 137 PEFEFMWLVDEAKKNLPLELDFLNEGRNAEKVSQML----RHFDFLKVPRIHWDL----- 187
Query: 124 IQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGN 183
S+E VL++EF+DG ++ND + +E ++ ++ + + Y+ I+V+GF + DPHPGN
Sbjct: 188 --STERVLLMEFVDGGQVNDRDYMERNKIDVNEISRHLGKMYSEMIFVNGFVHCDPHPGN 245
Query: 184 FLVSKDP---PHRPILLDFGLTKKLSSSMK 210
LV K P +LLD GL + L+ +
Sbjct: 246 VLVRKHPGTGKAEIVLLDHGLYQMLTEEFR 275
|
|
| TAIR|locus:2177487 AT5G50330 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 319 (117.4 bits), Expect = 6.1e-26, P = 6.1e-26
Identities = 89/280 (31%), Positives = 143/280 (51%)
Query: 1 MGGMFMDFVETPLATASIAQVHRATLVDGRQ--VVVKVQHQGIKTIILEDLKNAKSIVDW 58
+G +F F E PL +ASIAQVHRA +V G + VVVKVQH GI+ +++ D++N + +
Sbjct: 127 IGEIFETFDEKPLGSASIAQVHRA-IVKGNKMNVVVKVQHPGIERLMMTDIRNLQLFALY 185
Query: 59 IAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDV 118
+ + ++D + I E K+ E DF EA + L +E++ K P V
Sbjct: 186 MQRTDIKFDLHSITKEMEKQIGYEFDFKREANAMERIRCFL-----YENNKKSP-----V 235
Query: 119 LIPEVIQSSET--VLILEFMDGIR-LNDCESLEAFGVN---------KQKVVEEITRAYA 166
L+P V++ T VL++E+++GI L+ + + G+N K ++ ++RAY
Sbjct: 236 LVPRVLRDMVTKRVLVMEYINGIPILSIGDEMAKRGINPHGKIAEAAKHNILNSLSRAYG 295
Query: 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHV 226
I GFF+ DPHPGN L+ K LLD+G K+L + ++ A + A A+ +
Sbjct: 296 QMILKSGFFHADPHPGNILICKG--QEVALLDYGQVKELPNKLRLGYANLVIAMADNNAS 353
Query: 227 ALLSAFAEMGLRLRLDVPEQAMEVSTL---FFRTSAPANE 263
+ +F EMGL + E+ L F T P +
Sbjct: 354 RVSQSFWEMGLHTVAKCENEQQELLRLAQTLFDTKMPTGQ 393
|
|
| TAIR|locus:2177719 ATH13 "AT5G64940" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 326 (119.8 bits), Expect = 7.5e-26, P = 7.5e-26
Identities = 101/359 (28%), Positives = 175/359 (48%)
Query: 4 MFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE 63
+F F P+A AS+ QVHRA L G++VV+KVQ G+K + DLKN + I +++ +
Sbjct: 285 IFDRFDYEPIAAASLGQVHRARL-KGQEVVLKVQRPGLKDLFDIDLKNLRVIAEYLQKVD 343
Query: 64 PQYD-----FNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDV 118
P+ D + I DE +E+D+ EA N+ + + N K + K P+ +
Sbjct: 344 PKSDGAKRDWVAIYDECASVLYQEIDYTKEAANSELFANNF----KDLEYVKVPSIYWEY 399
Query: 119 LIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGD 178
P+V L +E++ GI++N ++L+ GV+++++ +Y QI GFF+ D
Sbjct: 400 TTPQV-------LTMEYVPGIKINKIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHAD 452
Query: 179 PHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 238
PHPGN V R I DFG+ +S ++++ L + F+ E D +L A +MG+
Sbjct: 453 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGVYEKDPDKVLQAMVQMGVL 512
Query: 239 LRL-DVPEQAMEVSTLFF------RTSAPANEAFE--TVKNLSEQRAKNLKVIQEKMKLN 289
+ D+ A+ + LFF R +A E E + L ++ + + QEK K
Sbjct: 513 VPTGDLT--AVRRTALFFLNSFEERLAAQRKEKEEIAAAEELGFKKPLSKEEKQEKKKQR 570
Query: 290 QKEV-KRFNPVDA-----FPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQ 342
+ + + A FP R ++L G+ ++ R +I +P+A +L+
Sbjct: 571 LAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLR 629
|
|
| UNIPROTKB|Q86TW2 ADCK1 "Uncharacterized aarF domain-containing protein kinase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 319 (117.4 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 77/210 (36%), Positives = 118/210 (56%)
Query: 4 MFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE 63
+F F +TPL TAS+AQVH+A L DGR V VKVQH ++ +D+ + +V +
Sbjct: 152 LFQSFDDTPLGTASLAQVHKAVLHDGRTVAVKVQHPKVRAQSSKDILLMEVLVLAVKQLF 211
Query: 64 PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV 123
P+++F ++DE K P ELDF +E N VS L +H D K P D+
Sbjct: 212 PEFEFMWLVDEAKKNLPLELDFLNEGRNAEKVSQML----RHFDFLKVPRIHWDL----- 262
Query: 124 IQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGN 183
S+E VL++EF+DG ++ND + +E ++ ++ + + Y+ I+V+GF + DPHPGN
Sbjct: 263 --STERVLLMEFVDGGQVNDRDYMERNKIDVNEISRHLGKMYSEMIFVNGFVHCDPHPGN 320
Query: 184 FLVSKDP---PHRPILLDFGLTKKLSSSMK 210
LV K P +LLD GL + L+ +
Sbjct: 321 VLVRKHPGTGKAEIVLLDHGLYQMLTEEFR 350
|
|
| UNIPROTKB|F1SE04 ADCK1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 306 (112.8 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 74/210 (35%), Positives = 118/210 (56%)
Query: 4 MFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE 63
+F+ F +TPL AS+AQVH+A L DGR V VKVQH ++ +D+ + +V +
Sbjct: 77 LFVSFDDTPLGAASLAQVHKAVLHDGRTVAVKVQHPKVQAQSSKDILLMEVLVLAVKQLF 136
Query: 64 PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV 123
P+++F ++DE K P ELDF +E N V+ L KH D K P ++
Sbjct: 137 PEFEFMWLVDEAKKNLPLELDFLNEGRNAEKVAQML----KHFDFLKVPRIHWEL----- 187
Query: 124 IQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGN 183
S++ VL++EF+DG ++ND + +E ++ ++ + + Y+ I+V+GF + DPHPGN
Sbjct: 188 --STKRVLLMEFVDGGQVNDRDYMERNKIDVNEISRHLGKMYSEMIFVNGFVHCDPHPGN 245
Query: 184 FLVSKDPPHRP---ILLDFGLTKKLSSSMK 210
LV K P +LLD GL + L+ +
Sbjct: 246 VLVRKRPGSEKAEIVLLDHGLYQVLTEEFR 275
|
|
| UNIPROTKB|F1N2C7 F1N2C7 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 310 (114.2 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 80/250 (32%), Positives = 132/250 (52%)
Query: 4 MFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE 63
+F +F P+A AS+AQVHRA L DG V VKVQ+ ++ D+ + ++ +
Sbjct: 197 LFQEFDYQPIAAASLAQVHRARLHDGTVVAVKVQYIDLRDRFDGDIHTLELLLHLVELMH 256
Query: 64 PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV 123
P + F+ ++ + +ELDF +E N + L +H V++P V
Sbjct: 257 PSFGFSWVLQDLKGTLAQELDFENEGRNAERCARELQ-HFRH------------VVVPRV 303
Query: 124 I--QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHP 181
SS+ VL EF +G ++ND E++++ G+ Q + E++ +A+A QI+ GF + DPHP
Sbjct: 304 HWGTSSKRVLTAEFYEGCKVNDVEAIQSMGLAVQDIAEKLIKAFAEQIFYTGFIHSDPHP 363
Query: 182 GNFLVSKDPPHRP--ILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRL 239
GN LV K P + +LLD GL + L + AL +++ A D A+ + AE+G++
Sbjct: 364 GNVLVRKGPDGKAQLVLLDHGLYQFLDEKDRLALCQLWRAIILRDEAAMKAHAAELGVQD 423
Query: 240 RLDVPEQAME 249
L E M+
Sbjct: 424 YLLFSEVLMQ 433
|
|
| TAIR|locus:2009764 AT1G65950 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 308 (113.5 bits), Expect = 2.7e-24, P = 2.7e-24
Identities = 76/220 (34%), Positives = 122/220 (55%)
Query: 4 MFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE 63
+++ F E P+A ASIAQVH A L + ++V VKVQ+ G+K ++ D + +A
Sbjct: 164 IYLSFDEEPIAAASIAQVHHAVLKNHQEVAVKVQYPGLKQNMMLDTMIMSFLSKSVAKIF 223
Query: 64 PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV 123
P+Y F+ ++ E+ K +ELDF EA+N+ ++ N KH NK + IP V
Sbjct: 224 PEYRFDWLVYEFVKSISQELDFLQEAKNSERIAKNF----KH---NKM------ITIPTV 270
Query: 124 IQSSET--VLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHP 181
T VL ++F G +++D ESL+ V+ +KV + + +A I+V GF +GDPHP
Sbjct: 271 FSEFTTTQVLTMQFCKGFKVDDVESLKRTNVSPEKVAKVLVEVFAEMIFVHGFIHGDPHP 330
Query: 182 GNFLVSKDPPH--RPILLDFGLTKKLSSSMKQALAKMFFA 219
GN LVS + + +LLD G K L + ++ +++ A
Sbjct: 331 GNILVSPEGQNGFSLVLLDHGNCKTLDEAFRRDFCRLWEA 370
|
|
| UNIPROTKB|Q5ZMT7 ADCK1 "Uncharacterized aarF domain-containing protein kinase 1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 306 (112.8 bits), Expect = 3.4e-24, P = 3.4e-24
Identities = 75/224 (33%), Positives = 123/224 (54%)
Query: 4 MFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE 63
+F+ F +TPL AS+AQVH+A L DGR V VK+QH ++ +D+ + ++ +
Sbjct: 142 LFVSFEDTPLGAASLAQVHKAVLQDGRTVAVKIQHPKVQAQSSKDIFLMEVLLLVVKQIF 201
Query: 64 PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV 123
P ++F +++E K P ELDF +E N V+ L K+ + K P ++
Sbjct: 202 PDFEFMWLVEEAKKNLPLELDFLNEGRNAEKVAQML----KNFEFLKVPRIYWEL----- 252
Query: 124 IQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGN 183
S+ VL++EFM+G ++ND +E G++ ++ + + Y+ I+V+GF + DPHPGN
Sbjct: 253 --STRRVLLMEFMEGGQVNDKAYMEKNGIDVNEISRNLGKLYSEMIFVNGFVHCDPHPGN 310
Query: 184 FLVSKDPPHRP---ILLDFGLTKKLSSSMKQALAKMFFAAAEGD 224
LV K P ILLD GL + LS S + +++ A + D
Sbjct: 311 VLVKKCPDSGKAYIILLDHGLYQVLSESFRMDYCRLWLALIKAD 354
|
|
| UNIPROTKB|E2RSN4 ADCK1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 305 (112.4 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 75/210 (35%), Positives = 119/210 (56%)
Query: 4 MFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE 63
+F+ F +TPL AS+AQVH+A L DGR V VKVQH ++ +D+ + +V +
Sbjct: 145 LFVSFDDTPLGAASLAQVHKAVLHDGRTVAVKVQHPKVQAQSSKDILLMEVLVLAVKQLF 204
Query: 64 PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV 123
P+++F ++DE K P ELDF +E N+ V+ L KH D K P D+
Sbjct: 205 PEFEFMWLVDEAKKNLPLELDFLNEGRNSEKVAQML----KHFDFLKVPRIYWDL----- 255
Query: 124 IQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGN 183
S++ VL++EF+DG ++ND + +E ++ ++ + + Y+ I+V+GF + DPHPGN
Sbjct: 256 --STKRVLLMEFVDGGQVNDRDYMEKNKIDVNEISRHLGKMYSEMIFVNGFVHCDPHPGN 313
Query: 184 FLVSKDPPHRPI---LLDFGLTKKLSSSMK 210
LV K P + LLD GL + L+ +
Sbjct: 314 VLVRKCPGTGKVEIVLLDHGLYQVLTDEFR 343
|
|
| ZFIN|ZDB-GENE-080401-5 adck1 "aarF domain containing kinase 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 305 (112.4 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 72/227 (31%), Positives = 120/227 (52%)
Query: 1 MGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIA 60
+ +F+ F ETP AS+AQVH+A L DGR V VKVQH ++ +D+ + ++ +
Sbjct: 141 LSDLFIQFDETPHGAASLAQVHKAVLPDGRTVAVKVQHPKVQRQSSKDIVVMEFLLQVVH 200
Query: 61 WAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLI 120
W P + F +++E K P ELDF +E N ++ L K K P D+
Sbjct: 201 WLFPDFAFMWLVEEAKKNMPLELDFLNEGRNAEKIADML----KQFSFLKIPKIHWDL-- 254
Query: 121 PEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPH 180
S++ +L ++F +G ++ND E + G+N ++ + + Y+ I+V+GF + DPH
Sbjct: 255 -----STKRILTMDFAEGGQVNDREYMRRHGINVNEISRNLGKIYSEMIFVNGFVHCDPH 309
Query: 181 PGNFLVSKDPPHRP---ILLDFGLTKKLSSSMKQALAKMFFAAAEGD 224
PGN LV K P +LLD GL + L+ + +++ + +GD
Sbjct: 310 PGNVLVRKSPESNKTEIVLLDHGLYQVLNQDFRLDYCRLWQSLIKGD 356
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 864 | |||
| COG0661 | 517 | COG0661, AarF, Predicted unusual protein kinase [G | 7e-56 | |
| TIGR01982 | 437 | TIGR01982, UbiB, 2-polyprenylphenol 6-hydroxylase | 1e-42 | |
| pfam00144 | 326 | pfam00144, Beta-lactamase, Beta-lactamase | 1e-38 | |
| PRK04750 | 537 | PRK04750, ubiB, putative ubiquinone biosynthesis p | 1e-35 | |
| COG1680 | 390 | COG1680, AmpC, Beta-lactamase class C and other pe | 3e-26 | |
| pfam03109 | 117 | pfam03109, ABC1, ABC1 family | 2e-25 | |
| PRK03642 | 432 | PRK03642, PRK03642, putative periplasmic esterase; | 2e-08 | |
| PRK11289 | 384 | PRK11289, ampC, beta-lactamase/D-alanine carboxype | 9e-08 | |
| PRK10662 | 378 | PRK10662, PRK10662, beta-lactam binding protein Am | 2e-05 | |
| PRK13128 | 518 | PRK13128, PRK13128, D-aminopeptidase; Reviewed | 2e-04 | |
| PRK14879 | 211 | PRK14879, PRK14879, serine/threonine protein kinas | 4e-04 | |
| TIGR03724 | 199 | TIGR03724, arch_bud32, Kae1-associated kinase Bud3 | 6e-04 | |
| PRK10359 | 232 | PRK10359, PRK10359, lipopolysaccharide core biosyn | 6e-04 | |
| pfam06176 | 229 | pfam06176, WaaY, Lipopolysaccharide core biosynthe | 0.001 | |
| cd05120 | 155 | cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot | 0.003 |
| >gnl|CDD|223733 COG0661, AarF, Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Score = 201 bits (512), Expect = 7e-56
Identities = 101/340 (29%), Positives = 164/340 (48%), Gaps = 36/340 (10%)
Query: 4 MFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE 63
+F +F P+A+ASIAQVHRA L G +V VKVQ GI+ I DLK + + I
Sbjct: 124 LFSEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLP 183
Query: 64 PQ---YDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLI 120
P D ++DE+ K +ELD+ EA N N +D DV +
Sbjct: 184 PGGRRLDLVEVVDEFEKRLREELDYRREAANAERFRENF------KDDP-------DVYV 230
Query: 121 PEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGD 178
P+V ++ VL +E++DGI+++D +L++ G++++++ E + RA+ Q+ DGFF+ D
Sbjct: 231 PKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLRDGFFHAD 290
Query: 179 PHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 238
PHPGN LV D R +LLDFG+ +L ++ LA++ A D+ + E+G
Sbjct: 291 PHPGNILVRSDG--RIVLLDFGIVGRLDPKFRRYLAELLLAFLNRDYDRVAELHVELGY- 347
Query: 239 LRLDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNP 298
VP T +A E + + + + KL + V R P
Sbjct: 348 ----VPPD-----TDRDPLAAAIRAVLEPIYGKP---LEEISFGEILDKLFE--VARRFP 393
Query: 299 VDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAE 338
+ P ++V+ R L L+ G+ ++ R + +P
Sbjct: 394 MR-LPPELVLLQRTLLLVEGVGRQLDPRFNLWAVAQPLLA 432
|
Length = 517 |
| >gnl|CDD|233667 TIGR01982, UbiB, 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 1e-42
Identities = 84/234 (35%), Positives = 128/234 (54%), Gaps = 30/234 (12%)
Query: 5 FMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIA-WAE 63
F +F E PLA ASIAQVHRA LVDG++V VKV GI+ I D+ ++ +A E
Sbjct: 117 FAEFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIA----LLYRLARIVE 172
Query: 64 ------PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD 117
+ ++ E+ K +ELD EA N ++ LG +N D
Sbjct: 173 RLSPDSRRLRPTEVVKEFEKTLRRELDLRREAAN----ASELG-ENFKNDPG-------- 219
Query: 118 VLIPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFF 175
V +PEV ++SE VL +E++DGI L+D +L+ G++++ + E + R++ +Q+ DGFF
Sbjct: 220 VYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRDGFF 279
Query: 176 NGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGD--HVA 227
+ D HPGN V KD + I LDFG+ +LS ++ LA++ + D VA
Sbjct: 280 HADLHPGNIFVLKDG--KIIALDFGIVGRLSEEDRRYLAEILYGFLNRDYRRVA 331
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol -> 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 437 |
| >gnl|CDD|215746 pfam00144, Beta-lactamase, Beta-lactamase | Back alignment and domain information |
|---|
Score = 146 bits (370), Expect = 1e-38
Identities = 78/293 (26%), Positives = 120/293 (40%), Gaps = 40/293 (13%)
Query: 369 LRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGIT 428
L + EL G I G+ V +DG+V++D G+ RPV D+LF + SVTK T
Sbjct: 1 LDRLIRELMAQGGIPGVAVAVTRDGKVVVDR-GGVADLEGGRPVTADTLFRIASVTKTFT 59
Query: 429 AGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGL-HNVSVDLSSENPL 487
A + LV+ GKL L++ ++ PEF GK I + +L HTSGL + D E
Sbjct: 60 AAAVLQLVERGKLDLDDPVSKYLPEFAGPGKGGITLRDLLTHTSGLPPLFAPDDLEEAA- 118
Query: 488 LICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPL 547
D E + +A P PG Y ++G L G ++ER +G+ ++E+L + I++PL
Sbjct: 119 --ADLAELVRALAALPPVWPPGTRWGYSNTAYGLL-GELLERVTGQSYEELLGDRILRPL 175
Query: 548 SIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPA 607
+ E +G+P + R A+ +VS
Sbjct: 176 GMT-ETELGVPEPGDPRDAAGYTGEGPPVRVSPGPLPAG--------------------- 213
Query: 608 VFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHP 660
A +AR LAR+ L G ++ L
Sbjct: 214 ------------AYAGLKSTARDLARFLLLLLGGLLLSAATLAQLTDWLRGGT 254
|
This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase. Length = 326 |
| >gnl|CDD|235310 PRK04750, ubiB, putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Score = 142 bits (360), Expect = 1e-35
Identities = 84/227 (37%), Positives = 115/227 (50%), Gaps = 29/227 (12%)
Query: 5 FMDFVETPLATASIAQVHRATLVD-GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIA--W 61
F DF PLA+ASIAQVH A L D GR+VVVKV I +I DL + W+
Sbjct: 119 FDDFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLL 178
Query: 62 AE-----PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEV 116
+ P+ ++ E+ K ELD EA N + N EDS+
Sbjct: 179 PDGRRLKPR----EVVAEFEKTLHDELDLMREAANASQLRRNF------EDSD------- 221
Query: 117 DVLIPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGF 174
+ +PEV SETV+++E M GI ++D +L A G + + + E + Q++ DGF
Sbjct: 222 MLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRDGF 281
Query: 175 FNGDPHPGNFLVSKDPPHRP--ILLDFGLTKKLSSSMKQALAKMFFA 219
F+ D HPGN VS DPP P I LDFG+ L+ K+ LA+ F A
Sbjct: 282 FHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKEDKRYLAENFLA 328
|
Length = 537 |
| >gnl|CDD|224594 COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms] | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 3e-26
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 7/194 (3%)
Query: 360 PIHSDVEAKLRDFLVELGNDGKI--LGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSL 417
+ A+L + + G+ + DG+ ++ G+ PV P ++
Sbjct: 29 EVAGFDAARLDRLADAIMEEYGAPGPGLALAVVLDGKTVVAKGYGVADEGYGGPVTPPTV 88
Query: 418 FPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSN--GKDLIKVHHVLNHTSGLH 475
F + SVTK TA +L LV+ GKL L++ ++ PE K G I + +L HTSGL
Sbjct: 89 FRIASVTKSFTATLLGKLVEEGKLDLDDPVSKYLPEGKDPATGGAPITLRDLLTHTSGLP 148
Query: 476 NVSVDLSSENPLLICDWDECLNRIALSAPET--EPGQEQLYHYLSFGWLCGGIIERASGK 533
+ L+ D + L +A PE PG Y ++G L G I+ER +GK
Sbjct: 149 FPEDYAYAVPKRLVQDQEAALEYLASLPPELAPPPGTAFAYSNSNYGLL-GAILERVTGK 207
Query: 534 KFQEILEEGIIQPL 547
+E+L E I +PL
Sbjct: 208 PLEELLRERIFEPL 221
|
Length = 390 |
| >gnl|CDD|111949 pfam03109, ABC1, ABC1 family | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 2e-25
Identities = 42/89 (47%), Positives = 55/89 (61%)
Query: 4 MFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE 63
+F +F E P+A ASIAQVHRA L DG +V VKVQ G+K I DLK K + +
Sbjct: 10 VFAEFDEEPIAAASIAQVHRAVLKDGEEVAVKVQRPGVKKRIRSDLKLLKFLAKILKKFF 69
Query: 64 PQYDFNPIIDEWCKEAPKELDFNSEAENT 92
P +D + ++DE+ K P+ELDF EA N
Sbjct: 70 PGFDLDWLVDEFRKSLPQELDFLREAANA 98
|
This family includes ABC1 from yeast and AarF from E. coli. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex and E. coli AarF is required for ubiquinone production. It has been suggested that members of the ABC1 family are novel chaperonins. These proteins are unrelated to the ABC transporter proteins. Length = 117 |
| >gnl|CDD|179620 PRK03642, PRK03642, putative periplasmic esterase; Provisional | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 2e-08
Identities = 49/212 (23%), Positives = 89/212 (41%), Gaps = 31/212 (14%)
Query: 367 AKLR--DFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYD-------PRPVQPDSL 417
KL D + D G+ + KD +++ + G +YD P +++
Sbjct: 38 EKLNQMDRWISQQIDAGYPGVNLLIIKDNQIVYRKAWGYAKKYDGSTLLAHPVKATTNTM 97
Query: 418 FPVFSVTKGITAGM-LHWLVDNGKLKLEENIANIWPEFKS------NGKDLIKVHHVLNH 470
+ + S TK L LV GKL + + I+ P FK GK+ +++ +L+H
Sbjct: 98 YDLASNTKMYATNFALQKLVSEGKLDVNDLISKYIPGFKDSPGDKIKGKNTLRIIDLLHH 157
Query: 471 TSGL--------HNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWL 522
++G V+ L S+ D L I + E +PG + +Y + + L
Sbjct: 158 SAGFPADPQYPNKAVAGALYSQ------DKSTTLEMIKKTPLEYQPGSKHIYSDVDY-ML 210
Query: 523 CGGIIERASGKKFQEILEEGIIQPLSIDGELY 554
G I+E +G+ +EE I +PL + ++
Sbjct: 211 LGFIVESITGQPLDRYVEESIYRPLGLTHTVF 242
|
Length = 432 |
| >gnl|CDD|236894 PRK11289, ampC, beta-lactamase/D-alanine carboxypeptidase; Provisional | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 9e-08
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 15/142 (10%)
Query: 410 RPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLN 469
+PV D+LF + SV+K TA + + G+L L + + PE K + D I + H+
Sbjct: 75 QPVTQDTLFELGSVSKTFTATLAGYAQARGELSLSDPASKYLPELKGSPFDGITLLHLAT 134
Query: 470 HTSGLHNVSVDLSSENPLLICDW----DECLNRIALSAPETEPGQEQLYHYLSFGWLCGG 525
+T+G L PL + D + L P PG ++LY S G L G
Sbjct: 135 YTAG------GL----PLQVPDEVKDDAQLLRYFQAWQPAYAPGTQRLYSNPSIG-LFGY 183
Query: 526 IIERASGKKFQEILEEGIIQPL 547
+ +A G+ F++++E+ + PL
Sbjct: 184 LAAKAMGQPFEQLMEQRLFPPL 205
|
Length = 384 |
| >gnl|CDD|236732 PRK10662, PRK10662, beta-lactam binding protein AmpH; Provisional | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 2e-05
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 10/144 (6%)
Query: 410 RPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWP---EFKSNGKDLIKVHH 466
RP Q DSL + S+TK +T+ +L L D+G +KL + ++ P + I + +
Sbjct: 76 RP-QLDSLIRIASITKLMTSEVLVKLADDGTVKLTDPLSKYAPPGARVPTYNGQPITLLN 134
Query: 467 VLNHTSGLHNVSVDLSSENPLLICDWDECLNR---IALSAPETEPGQEQLYHYLSFGWLC 523
+ HTS L ++ P+ + W R ++ + + PG + Y L+F L
Sbjct: 135 LATHTSALPREQPGGAAHRPVFV--WPTREQRWKWLSTAKLKAAPGTQAAYSNLAFD-LL 191
Query: 524 GGIIERASGKKFQEILEEGIIQPL 547
+ +A+GK + ++L E I +PL
Sbjct: 192 ADALAKAAGKPYTQLLREKITRPL 215
|
Length = 378 |
| >gnl|CDD|171868 PRK13128, PRK13128, D-aminopeptidase; Reviewed | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 2e-04
Identities = 49/218 (22%), Positives = 89/218 (40%), Gaps = 24/218 (11%)
Query: 367 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKG 426
L F+ + + K G V KDGEV++ + G + + P++ P+ SV+K
Sbjct: 7 PTLEAFVHAIPQNYKGPGGAVAVVKDGEVVLRHAWGFADLARRKAMTPETRMPICSVSKQ 66
Query: 427 ITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHN---VSVDLSS 483
T +L + ++ L+ +A +F+ V + N+ SGL + ++V L
Sbjct: 67 FTCAVLLDCIGEPEM-LDAALAAYLDQFE---DPRPAVRDLCNNQSGLRDYWALTV-LCG 121
Query: 484 ENPLLICDWDECLNRIA-LSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEG 542
P I D+ N + L PG Y +F + +IE+ +G+ ++L E
Sbjct: 122 AAPEGIFLPDQAQNLLRRLKTTHFAPGTHYSYCNGNFR-ILADLIEQHTGRSLADLLAER 180
Query: 543 IIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSG 580
I P + + A L DT ++ +G
Sbjct: 181 IFAPAGM--------------KTAELIPDTALFDECTG 204
|
Length = 518 |
| >gnl|CDD|237847 PRK14879, PRK14879, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 4e-04
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 19/93 (20%)
Query: 112 PA-YEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYA--HQ 168
PA Y VD ++++E+++G L D + + G+ + ++ EI R H
Sbjct: 64 PAVYFVDP--------ENFIIVMEYIEGEPLKD--LINSNGMEELELSREIGRLVGKLHS 113
Query: 169 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGL 201
G +GD N ++S + L+DFGL
Sbjct: 114 A---GIIHGDLTTSNMILSGG---KIYLIDFGL 140
|
Length = 211 |
| >gnl|CDD|234331 TIGR03724, arch_bud32, Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 6e-04
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 21/93 (22%)
Query: 114 YEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYA--HQIYV 171
Y+VD +++E+++G L D +++ EI R H+
Sbjct: 65 YDVDP--------DNKTIVMEYIEGKPLKD-----VIEEGNDELLREIGRLVGKLHKA-- 109
Query: 172 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204
G +GD N +V D + L+DFGL K
Sbjct: 110 -GIVHGDLTTSNIIVRDD---KLYLIDFGLGKY 138
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine [Unknown function, General]. Length = 199 |
| >gnl|CDD|182407 PRK10359, PRK10359, lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 6e-04
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 125 QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNF 184
+ ++++E+++G+ LND + K K+ I + H G +GDPH GNF
Sbjct: 114 YAHTYIMLIEYIEGVELNDMPEISE--DVKAKIKASIESLHQH-----GMVSGDPHKGNF 166
Query: 185 LVSKD 189
+VSK+
Sbjct: 167 IVSKN 171
|
Length = 232 |
| >gnl|CDD|114869 pfam06176, WaaY, Lipopolysaccharide core biosynthesis protein (WaaY) | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 0.001
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Query: 130 VLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKD 189
++++E+++G+ LND E K K+ + I + H G +GDPH GNF+VSKD
Sbjct: 119 IMLIEYIEGVELNDM--PEISEDVKAKIKQSIESLHQH-----GMVSGDPHRGNFIVSKD 171
|
This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system. Length = 229 |
| >gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.003
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 13/90 (14%)
Query: 117 DVLIPEVIQSSE----TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYA--HQIY 170
+ +P+V+ S E + L++E+++G L++ E K+ + E++ A HQ+
Sbjct: 52 GLPVPKVLASGESDGWSYLLMEWIEGETLDEVSEEE-----KEDIAEQLAELLAKLHQLP 106
Query: 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFG 200
+ +GD HPGN LV D ++D+
Sbjct: 107 LLVLCHGDLHPGNILV--DDGKILGIIDWE 134
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 864 | |||
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 100.0 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 100.0 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 100.0 | |
| KOG1235 | 538 | consensus Predicted unusual protein kinase [Genera | 100.0 | |
| PRK11289 | 384 | ampC beta-lactamase/D-alanine carboxypeptidase; Pr | 100.0 | |
| PRK10662 | 378 | beta-lactam binding protein AmpH; Provisional | 100.0 | |
| PRK03642 | 432 | putative periplasmic esterase; Provisional | 100.0 | |
| PRK13128 | 518 | D-aminopeptidase; Reviewed | 100.0 | |
| PF00144 | 329 | Beta-lactamase: Beta-lactamase; InterPro: IPR00146 | 100.0 | |
| COG1680 | 390 | AmpC Beta-lactamase class C and other penicillin b | 100.0 | |
| KOG1236 | 565 | consensus Predicted unusual protein kinase [Genera | 100.0 | |
| KOG1234 | 363 | consensus ABC (ATP binding cassette) 1 protein [Ge | 99.98 | |
| PF03109 | 119 | ABC1: ABC1 family; InterPro: IPR004147 This entry | 99.91 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.83 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.82 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.74 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 99.7 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.7 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.67 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 99.66 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.65 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 99.64 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 99.62 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.6 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 99.6 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.59 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.57 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 99.56 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.56 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 99.56 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.55 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 99.54 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.52 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.52 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 99.52 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.51 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.51 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 99.51 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 99.5 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.5 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 99.49 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 99.48 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.48 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.48 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 99.47 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 99.47 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.46 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.46 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.46 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.45 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.45 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.45 | |
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 99.45 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.44 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.44 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.44 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.44 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.44 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.44 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.43 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.43 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.43 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.43 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 99.43 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.43 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.43 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.43 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.43 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.42 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.42 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.42 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.42 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.42 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.42 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.42 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.42 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.41 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.41 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.41 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.41 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.41 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.41 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.41 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.41 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.41 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.4 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.4 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.4 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.4 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.4 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 99.4 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.39 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.39 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.39 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.39 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.39 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.39 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 99.39 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.39 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.38 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 99.38 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.38 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.38 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.38 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.38 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 99.37 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.37 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.36 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.36 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.35 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.35 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.35 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.35 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.35 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.34 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.34 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.34 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 99.34 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 99.34 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.34 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.34 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.33 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.33 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.33 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.33 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.33 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 99.33 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.32 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 99.32 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.32 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.32 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.31 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.31 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.31 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.31 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.31 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.31 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.31 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.31 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.31 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.3 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.3 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.3 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.3 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.3 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.3 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.3 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.3 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.3 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.29 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.29 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.29 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.29 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.29 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.29 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.29 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.29 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.29 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.28 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.28 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.28 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.28 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.28 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.28 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.28 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.28 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.27 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.27 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.27 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.27 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.27 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.27 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.27 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.27 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.27 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.27 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.27 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.27 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.27 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.26 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.26 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.26 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.26 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.26 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.25 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 99.25 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.25 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.25 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.25 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.25 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.25 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.25 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.24 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.24 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.24 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.24 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.24 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.24 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.24 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.24 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.24 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.24 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.24 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.24 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.24 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.24 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.24 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.23 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.23 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.23 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.23 | |
| PF06176 | 229 | WaaY: Lipopolysaccharide core biosynthesis protein | 99.23 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.23 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.23 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.23 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.23 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.23 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.23 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.23 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.22 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.22 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.22 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.22 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.22 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.22 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.22 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.22 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.22 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.22 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.22 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.21 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.21 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.21 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.21 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.21 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.21 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.21 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.21 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.21 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.21 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.21 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.21 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.21 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.21 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.21 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.2 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.2 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.2 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.2 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.2 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.2 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.2 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.2 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.2 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.2 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.2 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.2 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.2 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.2 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.2 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.2 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.2 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.19 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.19 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.19 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.19 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.19 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.19 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.19 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.19 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.19 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.19 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.19 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.18 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.18 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.18 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.18 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.18 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.18 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.18 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.18 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.18 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.18 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.18 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.17 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.17 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.17 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.17 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.17 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.17 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.17 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.17 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.17 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.16 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.16 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.16 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.16 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.16 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.16 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.16 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.16 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.16 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.16 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.15 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.15 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.15 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.15 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.15 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.15 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.14 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.14 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.14 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.14 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.14 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.14 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.14 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.14 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.14 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.14 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.14 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.14 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.14 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.14 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.13 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.13 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.13 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.13 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.13 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.13 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.13 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.13 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.13 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.12 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.12 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.12 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.12 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.12 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.12 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.11 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.11 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.11 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.11 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.11 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.11 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.11 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.11 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.1 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.1 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.1 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.1 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.1 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.1 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.09 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.09 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.08 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.08 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.08 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.08 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.08 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.08 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.08 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.08 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.08 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.07 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.07 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.07 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.07 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.07 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.06 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.06 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.06 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.05 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.05 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.05 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.05 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.05 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.05 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.05 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.04 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.04 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.04 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.04 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.03 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.03 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.03 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.03 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.02 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.02 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.02 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.01 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.01 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 98.99 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 98.99 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 98.99 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 98.99 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 98.99 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 98.98 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 98.98 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 98.98 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 98.98 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 98.98 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 98.98 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 98.98 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 98.97 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 98.97 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 98.96 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 98.96 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 98.93 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 98.91 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 98.91 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 98.91 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 98.9 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 98.86 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 98.86 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 98.85 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 98.84 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.83 | |
| KOG2270 | 520 | consensus Serine/threonine protein kinase involved | 98.82 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 98.82 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 98.82 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 98.8 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 98.8 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 98.79 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 98.78 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 98.78 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 98.77 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 98.73 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 98.72 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 98.72 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 98.7 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 98.68 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.67 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 98.67 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 98.64 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 98.61 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 98.59 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 98.59 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 98.54 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 98.53 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 98.5 | |
| KOG2268 | 465 | consensus Serine/threonine protein kinase [Signal | 98.47 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 98.4 | |
| cd05150 | 244 | APH Aminoglycoside 3'-phosphotransferase (APH). Th | 98.38 | |
| PF01636 | 239 | APH: Phosphotransferase enzyme family This family | 98.37 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 98.35 | |
| PRK09550 | 401 | mtnK methylthioribose kinase; Reviewed | 98.33 | |
| cd05155 | 235 | APH_ChoK_like_1 Uncharacterized bacterial proteins | 98.31 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 98.3 | |
| PRK10593 | 297 | hypothetical protein; Provisional | 98.3 | |
| COG2112 | 201 | Predicted Ser/Thr protein kinase [Signal transduct | 98.28 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 98.21 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 98.16 | |
| PLN02756 | 418 | S-methyl-5-thioribose kinase | 98.13 | |
| cd05157 | 235 | ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. | 98.13 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 98.09 | |
| TIGR02721 | 256 | ycfN_thiK thiamine kinase. Members of this family | 98.07 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.03 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 98.0 | |
| PRK12396 | 409 | 5-methylribose kinase; Reviewed | 97.96 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 97.95 | |
| PRK05231 | 319 | homoserine kinase; Provisional | 97.95 | |
| PRK15442 | 284 | beta-lactamase TEM; Provisional | 97.85 | |
| cd05152 | 276 | MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH | 97.84 | |
| cd05153 | 296 | HomoserineK_II Homoserine Kinase, type II. Homoser | 97.81 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 97.74 | |
| PF00768 | 240 | Peptidase_S11: D-alanyl-D-alanine carboxypeptidase | 97.74 | |
| COG1686 | 389 | DacC D-alanyl-D-alanine carboxypeptidase [Cell env | 97.72 | |
| PF03881 | 288 | Fructosamin_kin: Fructosamine kinase; InterPro: IP | 97.72 | |
| cd05156 | 302 | ChoK_euk Choline Kinase (ChoK) in eukaryotes. The | 97.69 | |
| TIGR00938 | 307 | thrB_alt homoserine kinase, Neisseria type. Homose | 97.68 | |
| COG2334 | 331 | Putative homoserine kinase type II (protein kinase | 97.65 | |
| TIGR01767 | 370 | MTRK 5-methylthioribose kinase. This enzyme is inv | 97.65 | |
| PLN02876 | 822 | acyl-CoA dehydrogenase | 97.6 | |
| PRK10001 | 400 | D-alanyl-D-alanine carboxypeptidase fraction C; Pr | 97.57 | |
| PF10707 | 199 | YrbL-PhoP_reg: PhoP regulatory network protein Yrb | 97.51 | |
| PRK10793 | 403 | D-alanyl-D-alanine carboxypeptidase fraction A; Pr | 97.43 | |
| KOG2269 | 531 | consensus Serine/threonine protein kinase [Signal | 97.42 | |
| PRK06148 | 1013 | hypothetical protein; Provisional | 97.4 | |
| PRK11397 | 388 | dacD D-alanyl-D-alanine carboxypeptidase; Provisio | 97.36 | |
| PRK11768 | 325 | serine/threonine protein kinase; Provisional | 97.2 | |
| COG3001 | 286 | Uncharacterized protein conserved in bacteria [Fun | 97.19 | |
| PLN02236 | 344 | choline kinase | 97.04 | |
| PRK11669 | 306 | pbpG D-alanyl-D-alanine endopeptidase; Provisional | 96.86 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 96.74 | |
| PLN02421 | 330 | phosphotransferase, alcohol group as acceptor/kina | 96.67 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 96.62 | |
| PRK06149 | 972 | hypothetical protein; Provisional | 96.62 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 96.46 | |
| COG3173 | 321 | Predicted aminoglycoside phosphotransferase [Gener | 96.38 | |
| PF04655 | 253 | APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r | 96.36 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 96.34 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 96.21 | |
| PF01633 | 211 | Choline_kinase: Choline/ethanolamine kinase; Inter | 96.13 | |
| PRK10271 | 188 | thiK thiamine kinase; Provisional | 95.26 | |
| PTZ00384 | 383 | choline kinase; Provisional | 95.0 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 94.67 | |
| PF13095 | 207 | FTA2: Kinetochore Sim4 complex subunit FTA2 | 94.1 | |
| PTZ00296 | 442 | choline kinase; Provisional | 94.1 | |
| PF12260 | 188 | PIP49_C: Protein-kinase domain of FAM69; InterPro: | 93.23 | |
| smart00587 | 196 | CHK ZnF_C4 abd HLH domain containing kinases domai | 92.83 |
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-55 Score=500.62 Aligned_cols=315 Identities=31% Similarity=0.542 Sum_probs=277.7
Q ss_pred CccccccccccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCC---CChHHHHHHHHH
Q 002927 1 MGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ---YDFNPIIDEWCK 77 (864)
Q Consensus 1 ~~~~F~~fd~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~---~~~~~~~~e~~~ 77 (864)
++++|++|+++|||||||||||+|++++|++|||||||||+++.+..|+.+++.+++++.+..+. +++..+++||.+
T Consensus 121 iee~F~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~ 200 (517)
T COG0661 121 IEELFSEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEK 200 (517)
T ss_pred HHHHHHHcCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999988765 999999999999
Q ss_pred HhHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHH
Q 002927 78 EAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQ 155 (864)
Q Consensus 78 ~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~ 155 (864)
.+..|+||++||+|+++|+++|+ +++.++||+||| |+++||||||++|.++.+...++..|.|++
T Consensus 201 ~l~~ElDy~~EA~n~~~~~~nf~-------------~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k 267 (517)
T COG0661 201 RLREELDYRREAANAERFRENFK-------------DDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRK 267 (517)
T ss_pred HHHHHhCHHHHHHHHHHHHHHcC-------------CCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHH
Confidence 99999999999999999999986 578999999997 899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHHc
Q 002927 156 KVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEM 235 (864)
Q Consensus 156 ~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~ 235 (864)
.+++.++++|++|++.+||||||||||||+|+.+ |+++++||||++++++.+|..++++++++..+|++.+++.+.++
T Consensus 268 ~ia~~~~~~f~~q~~~dgffHaDpHpGNi~v~~~--g~i~~lDfGi~g~l~~~~r~~l~~~~~a~~~rD~~~v~~~~~~~ 345 (517)
T COG0661 268 ELAELLVRAFLRQLLRDGFFHADPHPGNILVRSD--GRIVLLDFGIVGRLDPKFRRYLAELLLAFLNRDYDRVAELHVEL 345 (517)
T ss_pred HHHHHHHHHHHHHHHhcCccccCCCccceEEecC--CcEEEEcCcceecCCHHHHHHHHHHHHHHHhhCHHHHHHHHHHh
Confidence 9999999999999999999999999999999976 99999999999999999999999999999999999999999999
Q ss_pred CCCcC-CCcHHHHHHHHHHHHhccC-ChhhHHHHHHHHHHHHHhhHHHHHHHHHhhHHHHhhcCCCCCCCchhHHHHHHH
Q 002927 236 GLRLR-LDVPEQAMEVSTLFFRTSA-PANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVL 313 (864)
Q Consensus 236 G~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~ 313 (864)
|.... .|......++..++-.... +..+ + +..+.+.+.+.. ..+|+ +++|++++++.|++
T Consensus 346 G~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-------~-----~~~~~~~~~~~~----~~~~~--~r~p~~l~ll~r~~ 407 (517)
T COG0661 346 GYVPPDTDRDPLAAAIRAVLEPIYGKPLEE-------I-----SFGEILDKLFEV----ARRFP--MRLPPELVLLQRTL 407 (517)
T ss_pred CCCCCccchHHHHHHHHHHHHhhhCCChhh-------c-----cHHHHHHHHHHH----HHhcC--ccCCHHHHHHHHHH
Confidence 99743 4555555555544332211 1111 0 111122222222 33444 79999999999999
Q ss_pred HHHHHhhhccCccceeeccccchHHHHHhhhcCCC
Q 002927 314 NLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKE 348 (864)
Q Consensus 314 ~~leg~~~~L~p~~~~~~~~~p~~~~~L~~~l~p~ 348 (864)
.++||++++|+|++|++.++.|++.+....++.+.
T Consensus 408 ~~vEg~~~~ldp~~~~~~~a~p~~~~~~~~~~~~~ 442 (517)
T COG0661 408 LLVEGVGRQLDPRFNLWAVAQPLLAKWLKKQLSPK 442 (517)
T ss_pred HHHHHHHHhhCccccHHHHhhHHHHHHHHHhhhHH
Confidence 99999999999999999999999999999888775
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-52 Score=481.92 Aligned_cols=342 Identities=30% Similarity=0.401 Sum_probs=284.7
Q ss_pred ccccccccccccccccceeeEEEEecC-CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCC---CCChHHHHHHHHH
Q 002927 2 GGMFMDFVETPLATASIAQVHRATLVD-GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEP---QYDFNPIIDEWCK 77 (864)
Q Consensus 2 ~~~F~~fd~~plasaSigqV~~A~l~~-G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~---~~~~~~~~~e~~~ 77 (864)
+++|++||++|||||||||||+|++++ |++|||||+||++.+.+..|+++++.++.++++..+ .+++..+++|+.+
T Consensus 116 ~~~F~~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~ 195 (537)
T PRK04750 116 EEWFDDFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEK 195 (537)
T ss_pred HHHHHhcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHH
Confidence 578999999999999999999999987 999999999999999999999999999999997643 4688999999999
Q ss_pred HhHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHH
Q 002927 78 EAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQ 155 (864)
Q Consensus 78 ~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~ 155 (864)
.+.+|+||.+|++|+.+++++|. +.+.++||+||+ |+++||||||++|.++.++..+.+.+.++.
T Consensus 196 ~l~~ElD~~~Ea~N~~~~~~~f~-------------~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~ 262 (537)
T PRK04750 196 TLHDELDLMREAANASQLRRNFE-------------DSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMK 262 (537)
T ss_pred HHHHhhCHHHHHHHHHHHHHHcc-------------CCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHH
Confidence 99999999999999999999886 356799999997 999999999999999999877777889999
Q ss_pred HHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCC--CCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 002927 156 KVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDP--PHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFA 233 (864)
Q Consensus 156 ~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~--~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~ 233 (864)
.+++.+++.++.|+|.+||||||||||||+|+.++ +++++++|||+++.++++.|..+++++.|+..+|++.+++.+.
T Consensus 263 ~la~~~v~~~~~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~~r~~l~~~~~a~~~~D~~~v~~~~~ 342 (537)
T PRK04750 263 LLAERGVEVFFTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKEDKRYLAENFLAFFNRDYRRVAELHV 342 (537)
T ss_pred HHHHHHHHHHHHHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 99999999999999999999999999999998651 1389999999999999999999999999999999999999999
Q ss_pred HcCCCc-CCCcHHHHHHHHHHHHhcc-CChhhHHHHHHHHHHHHHhhHHHHHHHHHhhHHHHhhcCCCCCCCchhHHHHH
Q 002927 234 EMGLRL-RLDVPEQAMEVSTLFFRTS-APANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSR 311 (864)
Q Consensus 234 ~~G~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R 311 (864)
++|... ..+..++..++..++-... .+..+ + +....+.+.+.. .++|+ +++|++++++.|
T Consensus 343 ~~g~~~~~~~~~~l~~~i~~~~~~~~~~~l~~-------i-----~~~~~l~~l~~~----~r~~~--~~ip~~l~ll~k 404 (537)
T PRK04750 343 ESGWVPPDTRVEELEFAIRAVCEPIFDKPLAE-------I-----SFGHVLLRLFNT----ARRFN--VEIQPQLVLLQK 404 (537)
T ss_pred HhCCCCCCCCHHHHHHHHHHHHHHHhCCCccc-------c-----cHHHHHHHHHHH----HHHCC--CcccHHHHHHHH
Confidence 999864 3355555555544332211 12111 1 111223333443 44555 789999999999
Q ss_pred HHHHHHHhhhccCccceeeccccchHHHHHhhhcCCCCcchhh---hhccCCcchHHHHHHHHHHH
Q 002927 312 VLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAE---WIYSKPIHSDVEAKLRDFLV 374 (864)
Q Consensus 312 ~~~~leg~~~~L~p~~~~~~~~~p~~~~~L~~~l~p~~~~~~~---l~~~~P~~~~l~~~l~~~l~ 374 (864)
++.++||++++|||++|++++++||+.+++.+++.+....... .........+++..+.++++
T Consensus 405 tl~~lEG~~r~LdP~~d~~~~a~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~~l~ 470 (537)
T PRK04750 405 TLLNVEGLGRQLDPQLDLWKTAKPFLERWMKEQVGPRALVRALKEEAPFWAEKLPELPRLVHDSLR 470 (537)
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 9999999999999999999999999999999999876544322 11112223456666776665
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-49 Score=449.11 Aligned_cols=316 Identities=28% Similarity=0.494 Sum_probs=271.1
Q ss_pred CccccccccccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCC---CCChHHHHHHHHH
Q 002927 1 MGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEP---QYDFNPIIDEWCK 77 (864)
Q Consensus 1 ~~~~F~~fd~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~---~~~~~~~~~e~~~ 77 (864)
++++|.+||++|||+|||||||+|++++|++||||||||++.+.+..|+++++.++.++.+..+ .+++..+++||.+
T Consensus 113 ~~~~F~~fd~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 192 (437)
T TIGR01982 113 LEELFAEFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEK 192 (437)
T ss_pred HHHHHhhCCCcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHH
Confidence 3578999999999999999999999999999999999999999999999999999999887643 4689999999999
Q ss_pred HhHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHH
Q 002927 78 EAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQ 155 (864)
Q Consensus 78 ~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~ 155 (864)
.+.+|+||.+||+|+++|+++|+ +.+.++||++|+ |+++||||||++|.+|.++......+.++.
T Consensus 193 ~l~~Eldf~~Ea~n~~~~~~~~~-------------~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~ 259 (437)
T TIGR01982 193 TLRRELDLRREAANASELGENFK-------------NDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRK 259 (437)
T ss_pred HHHHHHCHHHHHHHHHHHHHhcC-------------CCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHH
Confidence 99999999999999999999876 467899999997 899999999999999999876655667888
Q ss_pred HHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHHc
Q 002927 156 KVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEM 235 (864)
Q Consensus 156 ~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~ 235 (864)
+++..+++.++.|+|.+|+||||||||||+++++ |+++|+|||+++.++++.+..+.+++.++..+|++.+.+.+.++
T Consensus 260 ~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~--g~i~liDfG~~~~l~~~~r~~l~~l~~a~~~~D~~~l~~~l~~~ 337 (437)
T TIGR01982 260 ALAENLARSFLNQVLRDGFFHADLHPGNIFVLKD--GKIIALDFGIVGRLSEEDRRYLAEILYGFLNRDYRRVAEVHFDA 337 (437)
T ss_pred HHHHHHHHHHHHHHHhCCceeCCCCcccEEECCC--CcEEEEeCCCeeECCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc
Confidence 9999999999999999999999999999999865 89999999999999999999999999999999999999999999
Q ss_pred CCCc-CCCcHHHHHHHHHHHHhccC-ChhhHHHHHHHHHHHHHhhHHHHHHHHHhhHHHHhhcCCCCCCCchhHHHHHHH
Q 002927 236 GLRL-RLDVPEQAMEVSTLFFRTSA-PANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVL 313 (864)
Q Consensus 236 G~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~ 313 (864)
|+.. ..|...+..++..++..... +. .++ +....+.+.++. ..++. +++|++++++.|++
T Consensus 338 g~~~~~~d~~~~~~~~~~~~~~~~~~~~-------~~~-----~~~~~~~~~~~~----~~~~~--~~~p~~~~~l~r~l 399 (437)
T TIGR01982 338 GYVPSDTDMAEFEQAIRAIGEPIFGQPL-------KEI-----SVGRLLAGLFKI----TRDFN--MELQPQLLLLQKTL 399 (437)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHhCCCh-------hhC-----CHHHHHHHHHHH----HHHCC--ccCCHHHHHHHHHH
Confidence 9864 34555555555544322111 11 111 111223333333 33443 68999999999999
Q ss_pred HHHHHhhhccCccceeeccccchHHHHHhhhcCCCC
Q 002927 314 NLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEP 349 (864)
Q Consensus 314 ~~leg~~~~L~p~~~~~~~~~p~~~~~L~~~l~p~~ 349 (864)
.++||++++|+|++|+.++++||+.+.+.++++++.
T Consensus 400 ~~leg~~~~L~p~~~~~~~~~p~~~~~~~~~~~~~~ 435 (437)
T TIGR01982 400 LTVEGVGRQLDPDLNMWKVAEPFVKRWIRKRLGPKA 435 (437)
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhcChhc
Confidence 999999999999999999999999999999887753
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG1235 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-48 Score=440.06 Aligned_cols=325 Identities=31% Similarity=0.507 Sum_probs=261.9
Q ss_pred CccccccccccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhH
Q 002927 1 MGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 80 (864)
Q Consensus 1 ~~~~F~~fd~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~ 80 (864)
++++|++||++|||+||+||||+|++++|+.||||||||++++.+..|+.+++.++..+.+..|.+++.++++|+.+.+.
T Consensus 157 ie~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~ 236 (538)
T KOG1235|consen 157 IEDIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLP 236 (538)
T ss_pred HHHHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHH
Q 002927 81 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 158 (864)
Q Consensus 81 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~ 158 (864)
.|+||.+||+|+++++++|++.+ ....|.||+||| |+++||||||++|++++|+..+++.++++.+++
T Consensus 237 ~ELDF~~EA~Nae~~~~~f~~~~----------~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~ 306 (538)
T KOG1235|consen 237 QELDFTKEAKNAERFRENFKDFS----------LLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDIL 306 (538)
T ss_pred hhcchHHHHHhHHHHHHHHHhcc----------cccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHH
Confidence 99999999999999999997421 123699999998 899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCeeccCCCCCCeEEccC--CCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHHcC
Q 002927 159 EEITRAYAHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMG 236 (864)
Q Consensus 159 ~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~G 236 (864)
..+.++|++|||.+||||||||||||+|+++ ++++++|+|||+++.++...|..++++|+++...|...+......+|
T Consensus 307 ~~l~~~~~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~~r~~~~~~~~a~~~~d~~~~~~~~~~~g 386 (538)
T KOG1235|consen 307 NKLVEAYLEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHKTRKDYAELWLALVFEDEKAMQALAEQLG 386 (538)
T ss_pred HHHHHHHHHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHHHHHHHHHHHHHHhcccHHHHHHHHHHhc
Confidence 9999999999999999999999999999964 35889999999999999999999999999999999999999999999
Q ss_pred CCcCCCcHHHHHHHHHHHHhccCChhhHHHHHHHHHHHHHhhHHHHHHHHHhhHHHHhhcCCCCCCCchhHHHHHHHHHH
Q 002927 237 LRLRLDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLL 316 (864)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~l 316 (864)
...+.+.+.++.++.....+...+.. .....+..........+.....+....+.+ .++|..+.++.|+...+
T Consensus 387 ~~~d~~~~~fa~~l~~~~~~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L------~~~p~~i~li~k~~~l~ 459 (538)
T KOG1235|consen 387 LGLDDLYPLFATALTGRPWDSVIGAG-ITKYLKGLEEDADENQKIASAKFPGISQLL------RRMPREILLILKTNDLL 459 (538)
T ss_pred cccchhhhhhHHHHhCCchhhccccc-hhhhhhhhhhhhhhHHHHHHHHhhHHHHHH------HhchHhhhhhcccHHHH
Confidence 87544555555554432222211100 000001111111111111112221111111 46899999999999999
Q ss_pred HHhhhccCccceeeccccchHHHHHh
Q 002927 317 RGLSSTMNVRIVYLDIMRPFAEYVLQ 342 (864)
Q Consensus 317 eg~~~~L~p~~~~~~~~~p~~~~~L~ 342 (864)
+++...|+-..+....+..+.+..++
T Consensus 460 r~~~~~l~~~~~~~~~f~~~~~~~~~ 485 (538)
T KOG1235|consen 460 RGLSSNLGIPSSLERSFLEMARLCLR 485 (538)
T ss_pred HhHHHHhccccccchHHHHHHHHHHH
Confidence 99999998888764344444444433
|
|
| >PRK11289 ampC beta-lactamase/D-alanine carboxypeptidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-46 Score=418.63 Aligned_cols=241 Identities=22% Similarity=0.301 Sum_probs=202.4
Q ss_pred chHHHHHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCC
Q 002927 362 HSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKL 441 (864)
Q Consensus 362 ~~~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l 441 (864)
..++.+.+++.+++.++++.+||++++|+++|++++. +||+++...+.|++++|+|+|||+||+||++++++|+|+|+|
T Consensus 28 ~~~~~~~vd~~i~~~~~~~~~pG~~vaV~~~g~~~~~-~~G~~~~~~~~p~~~dT~f~iaSvTK~fTa~~i~~Lve~G~L 106 (384)
T PRK11289 28 PQQLKDIVDRTITPLMEEQDIPGMAVAVIYNGKPYYF-NYGVADKATGQPVTQDTLFELGSVSKTFTATLAGYAQARGEL 106 (384)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCeEEEEEEECCEEEEE-eeeecccccCCCCCCCCEEeeeechHHHHHHHHHHHHHCCCC
Confidence 4578889999999999999999999999999998875 899999999999999999999999999999999999999999
Q ss_pred CccCchhhhcccCccCCCCccCHHhHhcCCCC-CCCCCCCccCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHH
Q 002927 442 KLEENIANIWPEFKSNGKDLIKVHHVLNHTSG-LHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFG 520 (864)
Q Consensus 442 ~ld~~v~~ylP~~~~~~~~~ITir~LLtHtSG-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~~~ 520 (864)
+|||||.+|+|+|...++++|||||||+|||| ++...+. ...+.+++++.+...++.++||+.|.|||.+|.
T Consensus 107 ~Lddpv~~ylP~~~~~~~~~ITir~LLtHtSGg~p~~~~~-------~~~~~~~l~~~l~~~~~~~~PG~~~~YSn~~y~ 179 (384)
T PRK11289 107 SLSDPASKYLPELKGSPFDGITLLHLATYTAGGLPLQVPD-------EVKDDAQLLRYFQAWQPAYAPGTQRLYSNPSIG 179 (384)
T ss_pred CCCCcHHHhCcccCCCCcCCeEHHHHhccccCCCcccCCc-------ccCCHHHHHHHHHhCCCCCCCCCCeeechHHHH
Confidence 99999999999998766789999999999995 7753221 235677888888888999999999999999998
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhhh
Q 002927 521 WLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQ 600 (864)
Q Consensus 521 ~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 600 (864)
|||.|||++||++|+++++++||+||||++|.+ ..++....+.+.+|...... .. ..
T Consensus 180 -lLg~iiE~vtg~~~~~~l~~~I~~PLGM~~T~~-~~~~~~~~~~a~gy~~~g~~--~~---~~---------------- 236 (384)
T PRK11289 180 -LFGYLAAKAMGQPFEQLMEQRLFPPLGLTHTYI-NVPEAEMADYAQGYNKEGKP--VR---VN---------------- 236 (384)
T ss_pred -HHHHHHHHHHCcCHHHHHHHhhhhhcCCCcccc-CCCccccccceeeeccCCCc--ee---cC----------------
Confidence 999999999999999999999999999999855 34444555666665322111 00 00
Q ss_pred hhcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCC
Q 002927 601 LAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPP 646 (864)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~ 646 (864)
+.+ ...|+||++||+.||+||++++++++.+++
T Consensus 237 -----------~~~--~~~~aGgl~ST~~Dl~~f~~all~~~~l~~ 269 (384)
T PRK11289 237 -----------PGV--LDAEAYGVKSTAADMLRFVQANLGPQDLDP 269 (384)
T ss_pred -----------CCc--ccCCceeeEECHHHHHHHHHHHcCCCCCCH
Confidence 000 012789999999999999999999887643
|
|
| >PRK10662 beta-lactam binding protein AmpH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-45 Score=412.34 Aligned_cols=247 Identities=19% Similarity=0.239 Sum_probs=198.8
Q ss_pred CcchHHHHHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCC
Q 002927 360 PIHSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNG 439 (864)
Q Consensus 360 P~~~~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G 439 (864)
|....+.+.+++++++.++++.+||++++|+++|++++ .+||+++...+.+++++|+|+|+|+||+||++++++|+|+|
T Consensus 26 ~~~~~~~~~id~~~~~~~~~~~~pG~~v~V~~~g~i~~-~~~G~~~~~~~~~~t~dT~f~iaSiTK~fta~ai~~Lve~G 104 (378)
T PRK10662 26 ADPLLASDIVDRYAEHIFYGSGATGMALVVIDGNQRVF-RSYGETRPGNNVRPQLDSLIRIASITKLMTSEVLVKLADDG 104 (378)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEECCEEEE-EeeeeccCCCCCCCCCCCeEEeeeecHHHHHHHHHHHHHCC
Confidence 33457788899999999999999999999999999888 68999999999999999999999999999999999999999
Q ss_pred CCCccCchhhhcccCc---cCCCCccCHHhHhcCCCCCCCCCCCccCCCCcC-CCCHHHHHHHHHccCCCCCCCCceecc
Q 002927 440 KLKLEENIANIWPEFK---SNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLL-ICDWDECLNRIALSAPETEPGQEQLYH 515 (864)
Q Consensus 440 ~l~ld~~v~~ylP~~~---~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~pg~~~~Ys 515 (864)
+|+||+||++|+|++. ....++|||||||+||||++.+........+.. ..+.++.++.+...++.++||+.|.||
T Consensus 105 ~l~lddpv~~ylP~~~~~~~~~~~~ITir~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~PGt~~~Ys 184 (378)
T PRK10662 105 TVKLTDPLSKYAPPGARVPTYNGQPITLLNLATHTSALPREQPGGAAHRPVFVWPTREQRWKWLSTAKLKAAPGTQAAYS 184 (378)
T ss_pred CCCCCCcHHHhCcccccCCCCCCCCccHHHHhhCcCCCCCCCCCccccCCcccCCCHHHHHHHHhcCCCcCCCCCceeec
Confidence 9999999999999853 222278999999999999997543221111111 125677888888889999999999999
Q ss_pred cCcHHHHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCc
Q 002927 516 YLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQP 595 (864)
Q Consensus 516 n~~~~~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 595 (864)
|.+|. |||.|||++||++|.+|++++||+||||++|.|.. .+....+.+..|. .. .+.
T Consensus 185 n~~~~-lLg~iie~vtg~~~~~~l~~~I~~PLGM~~T~~~~-~~~~~~~~a~g~~-~~----------~~~--------- 242 (378)
T PRK10662 185 NLAFD-LLADALAKAAGKPYTQLLREKITRPLGMKDTTFTP-SPDQCARLMVGEK-GA----------SPC--------- 242 (378)
T ss_pred chhHH-HHHHHHHHHhCCCHHHHHHHhCccccCCCCCcCCC-ChhhhhhcccccC-CC----------CCC---------
Confidence 99999 99999999999999999999999999999997642 2222333343330 00 000
Q ss_pred chhhhhhcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCC
Q 002927 596 DKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPP 646 (864)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~ 646 (864)
.+ .....|+||++||++||+||+++++++|.+..
T Consensus 243 -------------~~----~~~~~~aGGl~sT~~Dmak~~~~ll~~g~~~~ 276 (378)
T PRK10662 243 -------------NN----TLAAIGSGGVYSTPGDMMRWMQQFLSSDNYQR 276 (378)
T ss_pred -------------cc----ccccCCCCccccCHHHHHHHHHHHhCCCCCCc
Confidence 00 01224899999999999999999999887644
|
|
| >PRK03642 putative periplasmic esterase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-44 Score=412.42 Aligned_cols=269 Identities=19% Similarity=0.309 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCC-------CCCCCCCCCccccccccHHHH-HHHHHHH
Q 002927 364 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRY-------DPRPVQPDSLFPVFSVTKGIT-AGMLHWL 435 (864)
Q Consensus 364 ~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~-------~~~~~~~~t~f~i~SiTK~~t-a~~i~~l 435 (864)
+..+.+++.+++.+++ .+||++++|+++|+++++++||+++.. .+.|+++||+|+|+|+||+|| ++++++|
T Consensus 38 ~~~~~ld~~i~~~~~~-~~pG~sv~V~~~g~iv~~~~~G~~~~~~g~~~~~~~~~~t~dT~f~iaSiTK~ftt~~ai~~L 116 (432)
T PRK03642 38 EKLNQMDRWISQQIDA-GYPGVNLLIIKDNQIVYRKAWGYAKKYDGSTLLAHPVKATTNTMYDLASNTKMYATNFALQKL 116 (432)
T ss_pred HHHHHHHHHHHHHHhc-CCCeEEEEEEECCEEEEEeeeeeccccccccccccCCCCCCCCEEechhhhHHHHHHHHHHHH
Confidence 4457788888887775 589999999999999999999998853 457899999999999999997 5888999
Q ss_pred HHCCCCCccCchhhhcccCccC------CCCccCHHhHhcCCCCCCCCCCCccC--CCCcCCCCHHHHHHHHHccCCCCC
Q 002927 436 VDNGKLKLEENIANIWPEFKSN------GKDLIKVHHVLNHTSGLHNVSVDLSS--ENPLLICDWDECLNRIALSAPETE 507 (864)
Q Consensus 436 ve~G~l~ld~~v~~ylP~~~~~------~~~~ITir~LLtHtSGl~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~ 507 (864)
+|+|+|+||+||.+|||+|... ++++|||||||+||||++........ .......+.+++++.+...++.++
T Consensus 117 ve~G~l~ldd~v~~ylP~~~~~~~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 196 (432)
T PRK03642 117 VSEGKLDVNDLISKYIPGFKDSPGDKIKGKNTLRIIDLLHHSAGFPADPQYPNKAVAGALYSQDKSTTLEMIKKTPLEYQ 196 (432)
T ss_pred HHCCCCCCcCcHHHhcccccccccccccCCCCCcHHHHhhCccCCCCCcccccccccccccccCHHHHHHHHhhCCCcCC
Confidence 9999999999999999999742 34689999999999999874321111 111112355778888888999999
Q ss_pred CCCceecccCcHHHHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCC-ccccccceeccCCcccccccCCCCCC
Q 002927 508 PGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPG-VESRLASLTIDTDDLNKVSGINNRPD 586 (864)
Q Consensus 508 pg~~~~Ysn~~~~~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~p~ 586 (864)
||+.|.|||.+|. |||.|||+++|++|.+|++++||+||||++|+|...... ...+.+......... .+....|.
T Consensus 197 PG~~~~Ysn~~~~-lLg~iie~vtG~~~~~~~~e~If~PLgM~~t~~~~~~~~~~~~~~a~~~~~g~~~---~~~~~~p~ 272 (432)
T PRK03642 197 PGSKHIYSDVDYM-LLGFIVESITGQPLDRYVEESIYRPLGLTHTVFNPLQKGFKPQQIAATELNGNTR---DGVIHFPN 272 (432)
T ss_pred CCCceEecchHHH-HHHHHHHHHhCCCHHHHHHHhhhcccCCCcCcccCccccccHhhcCcccccCccc---cccccccc
Confidence 9999999999998 999999999999999999999999999999876421110 111222111000000 00000000
Q ss_pred CCCCCCCCcchhhhhhcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 587 LRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
.+. ...+ +. ....+.........|+||+++|++||+||+++++++|.+.+.
T Consensus 273 ~~~--~~~~-------~~-~~d~~~~~~~g~~~g~gGl~sTa~Dlakf~~~lL~~G~~~g~ 323 (432)
T PRK03642 273 IRT--NTLW-------GQ-VHDEKAFYSMGGVSGHAGLFSNTGDMAVLMQVMLNGGGYGNV 323 (432)
T ss_pred ccc--Ccee-------ee-ecCcchhhhcCCcccccccccCHHHHHHHHHHHHhcCCcCCc
Confidence 000 0000 00 000000001133457899999999999999999999988776
|
|
| >PRK13128 D-aminopeptidase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=408.42 Aligned_cols=323 Identities=20% Similarity=0.242 Sum_probs=236.3
Q ss_pred HHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCc
Q 002927 367 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEEN 446 (864)
Q Consensus 367 ~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~ 446 (864)
+.++++++++++++.+||++++|+++|+++++++||+++..++.|++++|+|+|||+||+|||++|++|+++|+ +||+|
T Consensus 7 ~~l~~~v~~l~~~~~~Pg~avaVv~~G~iv~~~~~G~ad~~~~~p~t~dT~f~IaSiTK~fTa~~il~Lveeg~-~LDdp 85 (518)
T PRK13128 7 PTLEAFVHAIPQNYKGPGGAVAVVKDGEVVLRHAWGFADLARRKAMTPETRMPICSVSKQFTCAVLLDCIGEPE-MLDAA 85 (518)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEECCEEEEEEeEEeeccccCCCCCCCCeEechhhHHHHHHHHHHHHHhcCC-CCCCc
Confidence 56777777878888999999999999999999999999999999999999999999999999999999999985 99999
Q ss_pred hhhhcccCccCCCCccCHHhHhcCCCCCCCCCCCcc--CCCCcCCCCHHHHHHHHHcc-CCCCCCCCceecccCcHHHHH
Q 002927 447 IANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLS--SENPLLICDWDECLNRIALS-APETEPGQEQLYHYLSFGWLC 523 (864)
Q Consensus 447 v~~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~~--~~~~~~~~~~~~~~~~l~~~-~~~~~pg~~~~Ysn~~~~~lL 523 (864)
|.+|||+|.. .+|||+|||+||||++++..... ...+......++..+.+... ++.++||+.|.|||.||. ||
T Consensus 86 v~~yLPe~~~---~~iTvr~LLtHTSGl~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~PGt~~~YSN~gy~-LL 161 (518)
T PRK13128 86 LAAYLDQFED---PRPAVRDLCNNQSGLRDYWALTVLCGAAPEGIFLPDQAQNLLRRLKTTHFAPGTHYSYCNGNFR-IL 161 (518)
T ss_pred HHHhcCCCCC---CCChHHHHhhCCCCCCccchhhhhcccccccCCCHHHHHHHHHhhccccCCCCCeeEEeCHHHH-HH
Confidence 9999999975 46999999999999997532211 11122234455666665553 568999999999999998 99
Q ss_pred HHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhhhhhc
Q 002927 524 GGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAA 603 (864)
Q Consensus 524 g~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 603 (864)
|.|||+++|++|.+|++++||+||||++|++.. .....+.+.+|......... |
T Consensus 162 g~iIE~vtG~~~~~~l~~~If~PLGM~~T~~~~--~~~~~~~a~Gy~~~~~~~~~------p------------------ 215 (518)
T PRK13128 162 ADLIEQHTGRSLADLLAERIFAPAGMKTAELIP--DTALFDECTGYEGDTVRGFL------P------------------ 215 (518)
T ss_pred HHHHHHHhCCCHHHHHHHhhhcccCCCccccCc--cccccccccccccCCCCCcc------c------------------
Confidence 999999999999999999999999999987632 22222334344211100000 0
Q ss_pred ccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccchhHHHHH
Q 002927 604 ITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTKKELLA 683 (864)
Q Consensus 604 ~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (864)
..+. ..+.|+||++||+.||+||+++++++...+.. +++
T Consensus 216 ----~~~~----~~~~g~gGl~STa~Dma~~~~~l~~~~~~~~~---------------------------------l~~ 254 (518)
T PRK13128 216 ----AINR----IHWLGDAGICASLDDMIAWEQFIDRTRDDENG---------------------------------LYR 254 (518)
T ss_pred ----Cccc----ccccCCcceEcCHHHHHHHHHHHHccCCChHH---------------------------------HHH
Confidence 0011 12347889999999999999998765332111 122
Q ss_pred HHhhcCCCCCCCccccccCCCCccccccCccchhhhhccccCCCCCCCccCCCCCCCCCCcccccccCCcccccccccCC
Q 002927 684 ALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVG 763 (864)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 763 (864)
+| ..|.+ +.+ |
T Consensus 255 ~~----------------------------------~~p~~-------------------------~~~----------g 265 (518)
T PRK13128 255 RL----------------------------------SVPQT-------------------------FAD----------G 265 (518)
T ss_pred hh----------------------------------cCCcc-------------------------ccC----------C
Confidence 12 11100 000 0
Q ss_pred CCCCCCCCCCccccCccccCCCCCCccccccCC-CCCccc--ccccCCCeEEEEEecccCCCcchHHHHHHHHHHhCCCC
Q 002927 764 DYGDLALPNGRFGLGFKRYNTRDGSYIGFGHSG-MGGSTG--FCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSELNLPV 840 (864)
Q Consensus 764 ~~~~~~~~~~~~glG~~~~~~~~~~~~~~gh~G-~~G~~~--~~~P~~~~~vv~~~N~~~~~~~~~~~~~~~~~~l~~p~ 840 (864)
....||+||.+.. ..+...+||+| ..|+.+ +++|+.+++||+++|..... .....+++...++.|.
T Consensus 266 -------~~~~YGlG~~~~~--~~G~~~~gH~G~~~Gf~s~~~~~Pe~~l~vvvl~N~~~~~--~~~a~~ll~~~~g~~~ 334 (518)
T PRK13128 266 -------APAPYGFGLKFEE--TGGKRLTGHGGALRGWRCQRWHCADERLSTIVMFNFEGNA--SDAALKMMNAALGIPP 334 (518)
T ss_pred -------CCCCceeeEEEEc--CCCCEEEEecCcCCCeEEEEEEeeCCCEEEEEEECCCCch--HHHHHHHHHHHhCCCC
Confidence 1246999998865 34556899999 777766 77999999999999985432 2334555566667664
Q ss_pred c
Q 002927 841 P 841 (864)
Q Consensus 841 ~ 841 (864)
|
T Consensus 335 ~ 335 (518)
T PRK13128 335 A 335 (518)
T ss_pred C
Confidence 4
|
|
| >PF00144 Beta-lactamase: Beta-lactamase; InterPro: IPR001466 This entry represents the serine beta-lactamase-like superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-43 Score=390.18 Aligned_cols=244 Identities=28% Similarity=0.421 Sum_probs=195.5
Q ss_pred HHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 369 LRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 369 l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
+++.+++.+++..+||++++|+++|+++++.++|+++...+.+++++|+|+++|+||+||++++++|+|+|+|+||+||+
T Consensus 1 ~~~~i~~~~~~~~~~g~a~~v~~~g~~~~~~~~G~~~~~~~~~~~~~t~~~i~SvsK~~ta~~v~~l~~~G~l~ld~~v~ 80 (329)
T PF00144_consen 1 IDRIIEQFMERYGIPGAAVAVIHNGKIVYEQYYGYADKQTGKPMTPDTVFRIGSVSKSFTATAVMQLIDEGKLDLDDPVS 80 (329)
T ss_dssp HHHHHHHHHHHTTESEEEEEEEETTEEEEEEEEEEEETTTTEEESTTSBEEEGGGHHHHHHHHHHHHHHTTSSGTTSBGG
T ss_pred ChHHHHHHHHhCCCcEEEEEEEECCEEEEEEEEeecccccCCCCCccceeeccCCcceeehhhhhhhhccccccccCccc
Confidence 46788888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCccCCCCccCHHhHhcCCCCCCCCCCCccCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHH
Q 002927 449 NIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIE 528 (864)
Q Consensus 449 ~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~lLg~iie 528 (864)
+|||++.....++|||+|||+||||++............ ...+++++.+...++.++||+.|.|||.+|. |||.|||
T Consensus 81 ~ylp~~~~~~~~~iTi~~LL~htSGl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~pg~~~~Ysn~~~~-ll~~ile 157 (329)
T PF00144_consen 81 KYLPEFPDPGKEKITIRDLLTHTSGLPDYEASDELFGDK--PFWDELLQYLANLPLNFPPGTQFAYSNTNYQ-LLGEILE 157 (329)
T ss_dssp GTTTTGTTCGGTTEBHHHHHTTHSSHSSSSHTTTHTSHH--HHHHHHHHHHHHSCSSSSTTSEEE--HHHHH-HHHHHHH
T ss_pred ccccccccccccCcccceeceeecCCCcccccccccccc--cchhHHHhhhhcccccccccccccccCcchh-hhhHHHH
Confidence 999988777778899999999999999874332211100 1126899999999999999999999999998 9999999
Q ss_pred HHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhhhhhcccccc
Q 002927 529 RASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAV 608 (864)
Q Consensus 529 ~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 608 (864)
+++|++|.++++++||+||||++|.|. .+.......+..+.......... .
T Consensus 158 ~~tg~~~~~~~~~~i~~plgm~~t~~~-~~~~~~~~~~~~~~~~~~~~~~~----------------------------~ 208 (329)
T PF00144_consen 158 RVTGKSFEELLQENIFQPLGMKHTGFG-PPDAWPPRDAIGYYGNGDQASSP----------------------------P 208 (329)
T ss_dssp HHHTSHHHHHHHHHTTTTTTSTTEESS-BGGGGGGGBEEEEEETTEEECEE----------------------------S
T ss_pred HhccchhHHHHHHHHHHHhhccccccc-ccccccccccccccccccccccc----------------------------c
Confidence 999999999999999999999998664 33333333343332222111110 0
Q ss_pred cccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 609 FNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 609 ~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
........|+||+++|++||+||++++++++.+...
T Consensus 209 ---~~~~~~~~~aggl~st~~Dlak~~~~~~~~~~~~~~ 244 (329)
T PF00144_consen 209 ---GYNPNPYYGAGGLFSTARDLAKFGQLLLNGGLILSP 244 (329)
T ss_dssp ---CTTHHHHTTTTTEEECHHHHHHHHHHHHHTGGSSCH
T ss_pred ---ccccccccccCccchhhHHHHHHHHHHhCCCccchh
Confidence 000011118999999999999999888888776655
|
It is a group of diverse group of sequences that includes D-alanyl-D-alanine carboxypeptidase B, aminopeptidase (DmpB), alkaline D-peptidase, animal D-Ala-D-Ala carboxypeptidase homologues and the class A and C beta-lactamases and eukaryotic beta-lactamase homologues which are variously described as: transesterases, non-ribosomal peptide synthetases and hypothetical proteins. Many are serine peptidases belonging to MEROPS peptidase families S11 (D-Ala-D-Ala carboxypeptidase A family) and S12 (D-Ala-D-Ala carboxypeptidase B family, clan SE). The beta-lactamases are classified as both S11 and S12 non-peptidase homologues; these either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. Beta-lactamase catalyses the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins []. There are four groups, classed A, B, C and D according to sequence, substrate specificity, and kinetic behaviour: class A (penicillinase-type) is the most common []. The genes for class A beta-lactamases are widely distributed in bacteria, frequently located on transmissible plasmids in Gram-negative organisms, although an equivalent chromosomal gene has been found in a few species []. Class A, C and D beta-lactamases are serine-utilising hydrolases - class B enzymes utilise a catalytic zinc centre instead. The 3 classes of serine beta-lactamase are evolutionarily related and belong to a superfamily that also includes DD-peptidases and other penicillin-binding proteins []. All these proteins contain an S-x-x-K motif, the Ser being the active site residue. Although clearly related, however, the sequences of the 3 classes of serine beta-lactamases vary considerably outside the active site. ; PDB: 1CI8_A 1CI9_B 1PW8_A 1PW1_A 1CEF_A 3PTE_A 1MPL_A 1PWG_A 1CEG_A 1IKG_A .... |
| >COG1680 AmpC Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=345.51 Aligned_cols=235 Identities=30% Similarity=0.443 Sum_probs=176.2
Q ss_pred ceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchhhhccc---CccCCC
Q 002927 383 LGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPE---FKSNGK 459 (864)
Q Consensus 383 ~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~~ylP~---~~~~~~ 459 (864)
+|++++++.+|++++.+.+|+++...+.+++++|+|+|+|+||+|||+++++|+|+|+|+|||||++|||+ .....
T Consensus 54 ~g~a~av~~~g~~~~~~~~g~~~~~~~~~~~~~t~f~i~S~TK~~ta~~i~~LveeG~l~lddpV~~ylP~~~~~~~~~- 132 (390)
T COG1680 54 PGLALAVVLDGKTVVAKGYGVADEGYGGPVTPPTVFRIASVTKSFTATLLGKLVEEGKLDLDDPVSKYLPEGKDPATGG- 132 (390)
T ss_pred CceEEEEEECCEEEEEeccccccccccCCCCCCceeeehhhhHHHHHHHHHHHHHcCCCCCCchHHHhCCCccCCcCCc-
Confidence 59999999999999989999999999999999999999999999999999999999999999999999996 22333
Q ss_pred CccCHHhHhcCCCCCCCCCCCccCCCCcCCCCHHHHHHHHHccC--CCCCCCCceecccCcHHHHHHHHHHHHhCCCHHH
Q 002927 460 DLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSA--PETEPGQEQLYHYLSFGWLCGGIIERASGKKFQE 537 (864)
Q Consensus 460 ~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~pg~~~~Ysn~~~~~lLg~iie~vtG~~~~~ 537 (864)
.+|||+|||+||||++...............+.+...+.+...+ ...+||+.+.|||.+|. +||.|||+++|++|++
T Consensus 133 ~~iTi~~LL~htSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pG~~~~Ysn~~~~-lLg~ive~v~G~~~~~ 211 (390)
T COG1680 133 APITLRDLLTHTSGLPFPEDYAYAVPKRLVQDQEAALEYLASLPPELAPPPGTAFAYSNSNYG-LLGAILERVTGKPLEE 211 (390)
T ss_pred cceeHHHhhhcccCCCCcccccccccchhhhhHHHHHHHHHhccccccCCCCcceeeecccHH-HHHHHHHHhcCCCHHH
Confidence 58999999999999998222111111122233445556777776 46777999999999999 9999999999999999
Q ss_pred HHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhhhhhccccccccccccccc
Q 002927 538 ILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRA 617 (864)
Q Consensus 538 ~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (864)
+++++||+||||++|.+. .++....+.+.......... .....| ....+...
T Consensus 212 ~~~~~i~~PLGm~~t~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~------------------------~~~~~~~~ 263 (390)
T COG1680 212 LLRERIFEPLGMTSTGFG-PPPAPQARLAAGLAPAVGGG---GEVDDP------------------------GTFGLGSA 263 (390)
T ss_pred HHHHHhhcccCCCccccc-cChhhhcccccccccccccC---CccccC------------------------cccccccc
Confidence 999999999999998654 33333333322210000000 000000 00111112
Q ss_pred ccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 618 IIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 618 ~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
..++||+++|++||++|++++++++.+.+.
T Consensus 264 ~~~~~gl~~t~~d~~~~~~~~l~~~~~~~~ 293 (390)
T COG1680 264 LAGAGGLFSTARDMARFGQALLNGGVLLGR 293 (390)
T ss_pred CCCCCceecccchHHHHHHHHhcCCCccch
Confidence 346799999999999999999999865554
|
|
| >KOG1236 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=298.11 Aligned_cols=312 Identities=20% Similarity=0.245 Sum_probs=252.0
Q ss_pred CccccccccccccccccceeeEEEEec-------C---------CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhC-
Q 002927 1 MGGMFMDFVETPLATASIAQVHRATLV-------D---------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE- 63 (864)
Q Consensus 1 ~~~~F~~fd~~plasaSigqV~~A~l~-------~---------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~- 63 (864)
++|+|.+|++.|||+|+|+|||+|+++ + .+.|||||.+|+++++++.|+.+|+..++...+..
T Consensus 185 ~~eiF~efn~~PIGsG~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~ir~Dl~Il~f~Akl~~~vP~ 264 (565)
T KOG1236|consen 185 IEEIFSEFNREPIGSGCIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQIRLDLGILGFGAKLINNVPD 264 (565)
T ss_pred HHHHHHhcCCcccccchhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHHHHHHHHHHHhhhhhhhhhcCc
Confidence 468999999999999999999999963 1 25799999999999999999999999988888653
Q ss_pred -CCCChHHHHHHHHHHhHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcC
Q 002927 64 -PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIR 140 (864)
Q Consensus 64 -~~~~~~~~~~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~ 140 (864)
.-+++...++.|.-.+..++|.++||.|+.+|..||. +...+.+|+++. .++.||+-+|.+|.+
T Consensus 265 l~wL~l~~~vkqF~v~ln~QvdL~~EA~hL~rF~~NF~-------------~s~~V~fP~P~~~~~~~~vl~E~~~~Gl~ 331 (565)
T KOG1236|consen 265 LSWLSLPLEVKQFSVGLNAQVDLRQEALHLPRFTNNFS-------------GSKKVLFPKPIAPLHTDLVLVETYERGLS 331 (565)
T ss_pred cccccCcchHHHHHHHHHhhcchhhhhhhhHHHHHhcc-------------cceeecCCcccccccccceeeeecccccc
Confidence 3467888899999999999999999999999999986 455788999986 899999999999999
Q ss_pred CCChHHHhhcCC-CHHHHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCC----------------------------
Q 002927 141 LNDCESLEAFGV-NKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPP---------------------------- 191 (864)
Q Consensus 141 L~~~~~~~~~~~-~~~~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~---------------------------- 191 (864)
+....+...... -.++++...++++++|++.++|+|+|+|||||+++..++
T Consensus 332 v~~~v~~~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~t~~~~~~~~~~e~~~~i~~~L~~~~~e~~ 411 (565)
T KOG1236|consen 332 VLRFVKWKSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNKTEDNLRGVHKAEKASAIKRGLEWFRSEVR 411 (565)
T ss_pred HHhhhhcccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecCCCccccccccchhhhHHhhhhhhhhhhhh
Confidence 998865332211 245778888899999999999999999999999975433
Q ss_pred -------------CceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHHcCCCcCC-CcHHHHHHHHHHHHhc
Q 002927 192 -------------HRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRL-DVPEQAMEVSTLFFRT 257 (864)
Q Consensus 192 -------------g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~ 257 (864)
-+++++|-|++..+++..+.++..++.|+++.|...+.+.+.+....... |...++..+..++...
T Consensus 412 d~~~~~~~~~~~~P~lvflDtGiv~kLs~qn~~N~l~lF~av~~~~Gy~ag~lml~~Sr~q~~~d~e~F~~kvEklv~~~ 491 (565)
T KOG1236|consen 412 DARFTDSPDLEYEPTLVFLDTGIVTKLSHQNQMNLLSLFRAVARFDGYDAGELMLERSRQQQCIDPERFARKVEKLVLKA 491 (565)
T ss_pred hhhhhccccccCCCeEEEecchhhhccChhhHHHHHHHHHHHHHhcchhHHHHHHhhcccccCCCHHHHHHHHHHHHHHh
Confidence 36899999999999999999999999999999999999999998876444 5556676776655442
Q ss_pred cCChhhHHHHHHHHHHHHHhhHHHHHHHHHhhHHHHhhcCCCCCCCchhHHHHHHHHHHHHhhhccCccceeeccccchH
Q 002927 258 SAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFA 337 (864)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~leg~~~~L~p~~~~~~~~~p~~ 337 (864)
... .......+...+.|.+.+ ++.|+ +++.++|..++-+++++||.+++|||+.|......+++
T Consensus 492 ~st----------~sl~tl~i~~ll~em~tm----vreH~--V~ids~f~tvvlsilvlEG~gRqLdP~lDl~~~~~~~l 555 (565)
T KOG1236|consen 492 RST----------KSLRTLNIGDLLSEMFTM----VREHH--VRIDSNFTTVVLSILVLEGFGRQLDPDLDLFQLRTFLL 555 (565)
T ss_pred hhh----------cccCcCcHHHHHHHHHHH----HHHhh--eeeccchHHHHHHHHHHhhhccccCCCcchhhhHHHHH
Confidence 210 000111233344555555 34444 79999999999999999999999999999998555555
Q ss_pred HHHH
Q 002927 338 EYVL 341 (864)
Q Consensus 338 ~~~L 341 (864)
...+
T Consensus 556 ~~~w 559 (565)
T KOG1236|consen 556 NVAW 559 (565)
T ss_pred HHHH
Confidence 5443
|
|
| >KOG1234 consensus ABC (ATP binding cassette) 1 protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=6e-33 Score=280.82 Aligned_cols=307 Identities=21% Similarity=0.297 Sum_probs=247.8
Q ss_pred ccccccccccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 2 GGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 2 ~~~F~~fd~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
.+.|++||+.|.|+|||||||+|++++|.+||||||+||+.+.+..|+..+.+++..-..+...+-++.+++..++.+..
T Consensus 46 ~~Kf~~fd~~P~AaASIGQVHrArl~~g~eVavKiQYPGva~sI~SD~~nl~~lLn~s~llPkGLFLd~~i~~ArkEL~~ 125 (363)
T KOG1234|consen 46 AQKFSSFDDGPFAAASIGQVHRARLADGPEVAVKIQYPGVARSIDSDANNLSRLLNFSGLLPKGLFLDVLIEVARKELKW 125 (363)
T ss_pred HHHHHhhccCccccccHHHHHHHHhcCCCeeeeecCCCchhhhccCcHHHHHHHHhhcccccccccHHHHHHHHHHhccc
Confidence 46799999999999999999999999999999999999999999999999998887766666678889999999999999
Q ss_pred hccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHH
Q 002927 82 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 159 (864)
Q Consensus 82 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~ 159 (864)
|.||.+||+...+|+..+. +++.++||.|+. |+.+||+||++.|.+|.....+. +..++.+..
T Consensus 126 ECDYqrEA~~~~kFr~LLs-------------~~p~f~VP~Vv~Elct~rvlt~el~~G~pid~~~~~s--Q~~rn~i~~ 190 (363)
T KOG1234|consen 126 ECDYQREAASALKFRPLLS-------------DDPNFYVPRVVDELCTVRVLTLELGQGLPIDKTAKLS--QETRNYIGY 190 (363)
T ss_pred ccchHHHHHHHhhhHHHhc-------------CCCCcchhHHHHhhccchhhhhhhhcCccchhhhccc--HHHHHHHHH
Confidence 9999999999999999765 688899999996 99999999999999998864432 345788999
Q ss_pred HHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHHcCCCc
Q 002927 160 EITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRL 239 (864)
Q Consensus 160 ~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~G~~~ 239 (864)
.++..+++.|++..|+.-||.-+|++++.. ..+|.|+|||.++....++...|++++.|+..+|.+.+.+..++||+..
T Consensus 191 ~~l~lcLrEif~f~fMQTDPNWsNFly~~~-tk~i~LlDFGAsr~y~~~F~d~Y~~~~~aaa~~dr~~v~e~S~~lgfLt 269 (363)
T KOG1234|consen 191 KLLELCLREIFEFRFMQTDPNWSNFLYNGR-TKKIELLDFGASREYGEKFIDKYIRLLKAAADRDREGVIEMSRELGFLT 269 (363)
T ss_pred HHHHHHHHHHHHHhhhcCCCCHHHhccCCC-cceEEEEeccccccccHHHHHHHHHHHHHHHhcchHHHHHHHHHhcccc
Confidence 999999999999999999999999999865 4789999999999999999999999999999999999999999999963
Q ss_pred CCCcHHHHHHHHHHHHhccCChhhHHHHHHHHHHHHHhhHHHHHHHHHhhHHHHhhcCCCCCCCchhHHHHHHHHHHHHh
Q 002927 240 RLDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGL 319 (864)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~leg~ 319 (864)
..... .+.+...++.+...|.++.-..+.+....+..+++..+..+.++ + ....|.|...+.|.+....=+
T Consensus 270 g~Es~----~m~DAHv~sv~ilgepfa~~~pydF~~q~~t~ri~~lipvmL~h----R-L~pPPeEtYsLHRklsG~fL~ 340 (363)
T KOG1234|consen 270 GYESK----VMEDAHVESVMILGEPFASDGPYDFGDQTVTDRIQNLIPVMLRH----R-LCPPPEETYSLHRKLSGAFLL 340 (363)
T ss_pred cchHH----HHHHHhhhHhhhccccccCCCCcCcCccHHHHHHHhhhHHHHhc----c-CCCCcHHHHHHHHHhhhHHHH
Confidence 21111 11111111111111111111223333344455666666654333 2 245788888999999999999
Q ss_pred hhccCccceeeccc
Q 002927 320 SSTMNVRIVYLDIM 333 (864)
Q Consensus 320 ~~~L~p~~~~~~~~ 333 (864)
|.+|++.+...+..
T Consensus 341 cakl~A~v~C~~lf 354 (363)
T KOG1234|consen 341 CAKLGATVPCRDLF 354 (363)
T ss_pred HHHhcCCCcHHHHH
Confidence 99999999776554
|
|
| >PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli [] | Back alignment and domain information |
|---|
Probab=99.91 E-value=6e-25 Score=205.35 Aligned_cols=111 Identities=39% Similarity=0.562 Sum_probs=104.5
Q ss_pred CccccccccccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCC--CChHHHHHHHHHH
Q 002927 1 MGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ--YDFNPIIDEWCKE 78 (864)
Q Consensus 1 ~~~~F~~fd~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~--~~~~~~~~e~~~~ 78 (864)
++++|++||++|||||||||||+|++++|++||||||||++++.+..|+++++.+++++.+..+. +++..+++++.+.
T Consensus 7 ~~~~F~~fd~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 86 (119)
T PF03109_consen 7 IDEIFDEFDPEPLASASIAQVHRARLKDGEEVAVKVQRPGIEEQIEADLRILRRLARLLERLPPFRRLDLEEIVDEFRDS 86 (119)
T ss_pred HHHHHHHCCcchhhheehhhheeeeecccchhhhhhcchHHHHHHHHHHHHHHHHHHHHHHcccccccCHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999987655 8999999999999
Q ss_pred hHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE
Q 002927 79 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI 124 (864)
Q Consensus 79 ~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~ 124 (864)
+.+|+||.+||+|+++|+++|. +.+.+.||+||
T Consensus 87 l~~ElDf~~Ea~n~~~~~~~~~-------------~~~~v~vP~vy 119 (119)
T PF03109_consen 87 LLEELDFRREAANLERFRKNFA-------------DSPRVYVPKVY 119 (119)
T ss_pred HHHHhCHHHHHHHHHHHHHHhC-------------CCCCEecCCCC
Confidence 9999999999999999999986 45789999986
|
These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins. |
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.7e-20 Score=189.86 Aligned_cols=182 Identities=18% Similarity=0.222 Sum_probs=120.6
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
.+||+||+|+||+|++.+|+.||||+.+++.... ..+.+.+...... .......+...++.+ .+.+|.+
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~~E~~ 71 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSF-KDRDKYIEGDPRF-RSRYSKSNPRKLVFA---------WAEKEFR 71 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceE-eeHHHHhcCCccc-ccccccCCHHHHHHH---------HHHHHHH
Confidence 6899999999999998789999999999985421 1111111000000 000000122222222 1346889
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHH---HHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQK---VVEEITRAYAH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~---l~~~~~~~~l~ 167 (864)
++.++.+ +.+.+|.++.....+|||||++|..+... .+.....+... ++..++.. +.
T Consensus 72 ~l~~l~~------------------~~i~~p~~~~~~~~~lVmE~~~g~~~~~~-~l~~~~~~~~~~~~i~~~l~~~-l~ 131 (190)
T cd05145 72 NLKRLYE------------------AGVPVPEPILLKKNVLVMEFIGDDGSPAP-RLKDVPLEEEEAEELYEQVVEQ-MR 131 (190)
T ss_pred HHHHHHh------------------CCCCCceEEEecCCEEEEEEecCCCchhh-hhhhccCCHHHHHHHHHHHHHH-HH
Confidence 9998865 24667888776677999999999865432 12333444433 34444433 66
Q ss_pred HHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 002927 168 QIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFA 233 (864)
Q Consensus 168 ~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~ 233 (864)
++|. .||+||||||+||+++ + ++++|+|||+++.++.. ...+++++|++.+...+.
T Consensus 132 ~lH~~~givHrDlkP~NIll~-~--~~~~liDFG~a~~~~~~-------~~~~~~~~~~~~~~~~~~ 188 (190)
T cd05145 132 RLYQEAGLVHGDLSEYNILYH-D--GKPYIIDVSQAVELDHP-------NALEFLRRDIRNINRFFR 188 (190)
T ss_pred HHHHhCCEecCCCChhhEEEE-C--CCEEEEEcccceecCCC-------CHHHHHHHHHHHHHHHhh
Confidence 7788 9999999999999998 4 79999999999998764 345567888888877664
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.7e-20 Score=185.50 Aligned_cols=183 Identities=16% Similarity=0.174 Sum_probs=119.8
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
..||+||+|+||+|+.++|+.||||+.+++.......| ..+....+ +.......++..++.++. ..|.+
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~---------~~E~~ 71 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRD-RYVSGEFR-FRHGYCKSNPRKMVRTWA---------EKEMR 71 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHH-HhhcCCch-hhccccCCCHHHHHHHHH---------HHHHH
Confidence 57999999999999988999999999998754322211 11100000 000011233333333322 35888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH--HHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA--YAHQ 168 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~--~l~~ 168 (864)
++.++.+. .+.+|.++.....+|||||++|..+.... +....++...+...+.++ .+.+
T Consensus 72 ~l~~l~~~------------------~v~~p~~~~~~~~~iVmE~i~g~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~ 132 (190)
T cd05147 72 NLKRLVTA------------------GIPCPEPILLKSHVLVMEFIGDDGWAAPR-LKDAPLSESKARELYLQVIQIMRI 132 (190)
T ss_pred HHHHHHHC------------------CCCCCcEEEecCCEEEEEEeCCCCCcchh-hhcCCCCHHHHHHHHHHHHHHHHH
Confidence 99988652 33456666666679999999997665432 233456666666666553 3777
Q ss_pred H-HhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 002927 169 I-YVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFA 233 (864)
Q Consensus 169 i-~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~ 233 (864)
+ |..|++||||||+|||++. ++++|||||++.......- ..++.+|.+.+.+.++
T Consensus 133 l~H~~giiHrDlkP~NIli~~---~~v~LiDFG~a~~~~~~~~-------~~~~~~d~~~~~~~f~ 188 (190)
T cd05147 133 LYQDCRLVHADLSEYNLLYHD---GKLYIIDVSQSVEHDHPHA-------LEFLRMDCVNVNDFFR 188 (190)
T ss_pred HHHhCCcccCCCCHHHEEEEC---CcEEEEEccccccCCCcCH-------HHHHHHHHHHHHHHhc
Confidence 7 6999999999999999973 6899999999986644332 2345667666666553
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.9e-17 Score=174.41 Aligned_cols=185 Identities=20% Similarity=0.265 Sum_probs=126.5
Q ss_pred cccccccceeeEEEE--ecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRAT--LVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~--l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
++||+|++|+||+|+ .++|++||||+.+++.......+.. ............+.... .+..+.+|
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~---------~~~~~~~E 100 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRY----VDGDFRFKYRKINPRKL---------VRLWAEKE 100 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhh----cccchhhccCCCCHHHH---------HHHHHHHH
Confidence 689999999999998 4689999999998765321110000 00000000000111111 11235679
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHH---HHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQ---KVVEEITRAY 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~---~l~~~~~~~~ 165 (864)
++++.++.+. .+.+|+++.....+|||||++|.++..... .....+.. .++..++. .
T Consensus 101 ~~~L~~L~~~------------------~i~~p~~~~~~~~~lV~E~~~g~~L~~~~~-~~~~~~~~~~~~i~~qi~~-~ 160 (237)
T smart00090 101 FRNLQRLYEA------------------GVPVPKPIAWRRNVLVMEFIGGDGLPAPRL-KDVEPEEEEEFELYDDILE-E 160 (237)
T ss_pred HHHHHHHHhc------------------CCCCCeeeEecCceEEEEEecCCccccccc-ccCCcchHHHHHHHHHHHH-H
Confidence 9999998652 356788887667799999999988866431 12222322 34444443 3
Q ss_pred HHHHHhcC-eeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHHcCCC
Q 002927 166 AHQIYVDG-FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 238 (864)
Q Consensus 166 l~~i~~~G-~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~G~~ 238 (864)
+.++|..| ++|+|+||+||+++ + ++++|+|||++.......+ .+++++|.+.+...+.++|..
T Consensus 161 l~~LH~~g~iiH~Dikp~NIli~-~--~~i~LiDFg~a~~~~~~~~-------~~~~~~d~~~~~~~~~~~~~~ 224 (237)
T smart00090 161 MRKLYKEGELVHGDLSEYNILVH-D--GKVVIIDVSQSVELDHPMA-------LEFLERDIRNIIRFFRRKGVD 224 (237)
T ss_pred HHHHHhcCCEEeCCCChhhEEEE-C--CCEEEEEChhhhccCCcch-------HHHHHHHHHHHHHHHHHcCCC
Confidence 78899999 99999999999998 3 7899999999998777554 456899999999999999984
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.9e-17 Score=173.56 Aligned_cols=144 Identities=17% Similarity=0.215 Sum_probs=95.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-||+||||.||+|+++ +|..||||-.... .+..+..+.+..|+.+..|.
T Consensus 16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~-----------------------------~l~~k~~e~L~~Ei~iLkel 66 (429)
T KOG0595|consen 16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKK-----------------------------KLNKKLVELLLSEIKILKEL 66 (429)
T ss_pred hhccCcceEEEEEeEeccCCceEEeeeehhh-----------------------------ccCHHHHHHHHHHHHHHHhc
Confidence 44999999999999987 7999999943211 11122223333444444443
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHH---HH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR---AY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~---~~ 165 (864)
+ |. --|.+-+..+ .+..+||||||+|++|+++.... ..++ +..++...+ ..
T Consensus 67 ~------H~-----------------nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~-~~l~-e~t~r~Fm~QLA~a 121 (429)
T KOG0595|consen 67 K------HP-----------------NIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRR-GRLP-EATARHFMQQLASA 121 (429)
T ss_pred C------Cc-----------------ceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHc-CCCC-HHHHHHHHHHHHHH
Confidence 2 21 0133334444 56678999999999999986532 2333 333333222 33
Q ss_pred HHHHHhcCeeccCCCCCCeEEccC-CC---CceEEEecccccccChH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKD-PP---HRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~-~~---g~i~LiDFG~~~~l~~~ 208 (864)
++.+|+.+|+||||||.|||+... .+ -.++|.|||+++.+.+.
T Consensus 122 lq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~ 168 (429)
T KOG0595|consen 122 LQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPG 168 (429)
T ss_pred HHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCch
Confidence 778899999999999999999864 12 35899999999999853
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.9e-16 Score=162.54 Aligned_cols=170 Identities=17% Similarity=0.259 Sum_probs=116.5
Q ss_pred ccccccccceeeEEEEecCCCEEEEEEecCChHHH--HHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 10 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTI--ILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~--~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
.++|++|++|+||+|..++|+.||||+.+++.... ...+.+.+. .-....... ..+..+..
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~------~~~~~~~~ 82 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLG-----------DRKHASWLY------LSRLAAQK 82 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHh-----------ccccchhHH------HhHHHHHH
Confidence 47899999999999998899999999987654211 110100000 000000001 12223556
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHH
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAH 167 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~ 167 (864)
|...+..+.+. .+.+|+++.....++||||++|.+|.+.... .....++..++.. +.
T Consensus 83 E~~~l~~l~~~------------------~i~v~~~~~~~~~~lv~e~~~g~~L~~~~~~----~~~~~~~~~i~~~-l~ 139 (198)
T cd05144 83 EFAALKALYEE------------------GFPVPKPIDWNRHAVVMEYIDGVELYRVRVL----EDPEEVLDEILEE-IV 139 (198)
T ss_pred HHHHHHHHHHc------------------CCCCCceeecCCceEEEEEeCCcchhhcccc----ccHHHHHHHHHHH-HH
Confidence 77777776441 2456777776677999999999998775321 2345566666554 46
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHH----HHHHHHHH
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQAL----AKMFFAAA 221 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~----~~l~~a~~ 221 (864)
++|..|++|+|+||+||+++.+ ++++|+|||++..++.+.+..+ ...++++.
T Consensus 140 ~lh~~gi~H~Dl~p~Nill~~~--~~~~liDfg~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (198)
T cd05144 140 KAYKHGIIHGDLSEFNILVDDD--EKIYIIDWPQMVSTDHPNAEELLDRDVENILRFF 195 (198)
T ss_pred HHHHCCCCcCCCCcccEEEcCC--CcEEEEECCccccCCCccHHHHHHHHHHHHHHHH
Confidence 7899999999999999999864 8999999999999999888887 55555544
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.67 E-value=9.9e-16 Score=155.46 Aligned_cols=165 Identities=22% Similarity=0.295 Sum_probs=107.8
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
++|++|++|+||+|+..+|++||||+.+++.......+..++ .+.... ....++..+. +.....|.+
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~---------~~~~~~e~~ 69 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRT---GDYRFG-RKKSNWRYLS---------RLWAEKEFR 69 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhH---HHHHhc-cCCcchhhhh---------hHHHHHHHH
Confidence 579999999999999878999999999886543322221110 000000 0011111111 112334666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCc-----CCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGI-----RLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~-----~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
++.++... .+.+|+++.+...+|+|||++|. .+.+... ......++..++..
T Consensus 70 ~l~~l~~~------------------~~~~~~~~~~~~~~lv~e~~~g~~~~~~~l~~~~~----~~~~~~~~~~~~~~- 126 (187)
T cd05119 70 NLKRLYEA------------------GVPVPKPIDLNRHVLVMEFIGGDGIPAPRLKDVRL----LEDPEELYDQILEL- 126 (187)
T ss_pred HHHHHHHc------------------CCCCCceEecCCCEEEEEEeCCCCccChhhhhhhh----cccHHHHHHHHHHH-
Confidence 66666542 35678888777889999999994 3433211 02334455544444
Q ss_pred HHHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHH
Q 002927 166 AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALA 214 (864)
Q Consensus 166 l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~ 214 (864)
+..+|. .|++|+|+||+||+++ + +.++|+|||++.....+.+..+.
T Consensus 127 l~~lh~~~~ivH~Dl~p~Nili~-~--~~~~liDfg~a~~~~~~~~~~~~ 173 (187)
T cd05119 127 MRKLYREAGLVHGDLSEYNILVD-D--GKVYIIDVPQAVEIDHPNAEEFL 173 (187)
T ss_pred HHHHhhccCcCcCCCChhhEEEE-C--CcEEEEECcccccccCcchHHHH
Confidence 667888 9999999999999998 4 78999999999988886666654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.8e-16 Score=172.46 Aligned_cols=147 Identities=18% Similarity=0.221 Sum_probs=99.8
Q ss_pred ccccc-cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 6 MDFVE-TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 6 ~~fd~-~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
++|+. ++||.|.||+||.|+-+ +|+.+|+|+++.. ++--+. --+.+..|-
T Consensus 141 ~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS-------~M~~~~---------------------Qv~hV~aER 192 (550)
T KOG0605|consen 141 DDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKS-------EMLKKN---------------------QVEHVRAER 192 (550)
T ss_pred ccchhheeeccccceeEEEEEEccCCcEEeeecccHH-------HHHhhh---------------------hHHHHHHHH
Confidence 45664 89999999999999977 7999999987631 110000 001122222
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcC-CCHHHHH
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFG-VNKQKVV 158 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~-~~~~~l~ 158 (864)
|...|+ + .-.|-++|+ ....||||||++|+++..++. ..+ +.....-
T Consensus 193 diL~~~------------------------d--s~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~--~~~~L~e~~ar 244 (550)
T KOG0605|consen 193 DILAEV------------------------D--SPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLM--RKDTLTEDWAR 244 (550)
T ss_pred HHhhhc------------------------C--CCcEEEEEEEecCCCeeEEEEEecCCccHHHHHH--hcCcCchHHHH
Confidence 222221 1 223456665 456789999999999887743 333 3333333
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHH
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 210 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 210 (864)
-.+++.+ +..||++|++||||||.|+||+.. |.|+|.|||++.-+....+
T Consensus 245 fYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~--GHiKLSDFGLs~gl~~~~~ 296 (550)
T KOG0605|consen 245 FYIAETVLAIESIHQLGYIHRDIKPDNLLIDAK--GHIKLSDFGLSTGLDKKHR 296 (550)
T ss_pred HHHHHHHHHHHHHHHcCcccccCChhheeecCC--CCEeeccccccchhhhhhh
Confidence 3344443 788999999999999999999976 9999999999987776655
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.9e-16 Score=158.88 Aligned_cols=141 Identities=21% Similarity=0.306 Sum_probs=99.6
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.++.|.+|+||.+.. +++.||||+.+|..... +.. ...+...=-|.+|++
T Consensus 37 ~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~---~~~-------------------------~~~f~~g~~~e~Ea~ 87 (232)
T PRK10359 37 KVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRT---ERF-------------------------LKSFVKGDYYENLIV 87 (232)
T ss_pred EEecCCCceEEEEEec-CCCcEEEEEechhcCch---HHH-------------------------HHhhhhhHHHHHHHH
Confidence 6899999999999765 67899999998876432 000 000111112678999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 160 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 160 (864)
++.++.+. ++..|..+. ++..+|+|||++|.+|.++... + +.....
T Consensus 88 ~l~rL~~~------------------GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~~-----~-~~~~~~ 143 (232)
T PRK10359 88 QTDRVRSE------------------GLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPEI-----S-EDVKAK 143 (232)
T ss_pred HHHHHHHC------------------CCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhhc-----c-HHHHHH
Confidence 99998652 233333321 4578999999999999876321 2 233333
Q ss_pred HHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 161 ITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 161 ~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+ ...+.++|..|++||||||+||+++++ | ++|+|||++.....+
T Consensus 144 i-~~~l~~lH~~gi~H~Dikp~Nili~~~--g-i~liDfg~~~~~~e~ 187 (232)
T PRK10359 144 I-KASIESLHQHGMVSGDPHKGNFIVSKN--G-LRIIDLSGKRCTAQR 187 (232)
T ss_pred H-HHHHHHHHHcCCccCCCChHHEEEeCC--C-EEEEECCCcccccch
Confidence 3 335889999999999999999999865 6 999999999877543
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=9.8e-16 Score=157.93 Aligned_cols=154 Identities=19% Similarity=0.264 Sum_probs=103.8
Q ss_pred cccccccccccccceeeEEEEec-CCCEEEEEEec-----CChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHH
Q 002927 5 FMDFVETPLATASIAQVHRATLV-DGRQVVVKVQH-----QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 78 (864)
Q Consensus 5 F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~-----p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 78 (864)
|+.+. -+|.||+|.|++++.+ +|+.||||.-. |.+.+..-++++.|+.+- +-
T Consensus 4 YE~Lg--kvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLk--------H~------------ 61 (396)
T KOG0593|consen 4 YEKLG--KVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLK--------HE------------ 61 (396)
T ss_pred Hhhhh--ccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcc--------cc------------
Confidence 44443 4999999999999988 79999999643 333333333333222211 11
Q ss_pred hHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHH
Q 002927 79 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 158 (864)
Q Consensus 79 ~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~ 158 (864)
|+..+-+-|++ ..+..||.|||+-.-|.+++. -..|.+.+.+-
T Consensus 62 ------------NLVnLiEVFrr------------------------krklhLVFE~~dhTvL~eLe~-~p~G~~~~~vk 104 (396)
T KOG0593|consen 62 ------------NLVNLIEVFRR------------------------KRKLHLVFEYCDHTVLHELER-YPNGVPSELVK 104 (396)
T ss_pred ------------hHHHHHHHHHh------------------------cceeEEEeeecchHHHHHHHh-ccCCCCHHHHH
Confidence 22222222221 233469999999766665543 34577877777
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh---HHHHHHHHHHHH
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS---SMKQALAKMFFA 219 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~---~~r~~~~~l~~a 219 (864)
..+.+.+ +..+|.++++|||+||+||||+.. |.++|+|||.++.++. .-.+.++.-||.
T Consensus 105 ~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~--gvvKLCDFGFAR~L~~pgd~YTDYVATRWYR 168 (396)
T KOG0593|consen 105 KYLYQLLKAIHFCHKNNCIHRDIKPENILITQN--GVVKLCDFGFARTLSAPGDNYTDYVATRWYR 168 (396)
T ss_pred HHHHHHHHHhhhhhhcCeecccCChhheEEecC--CcEEeccchhhHhhcCCcchhhhhhhhhhcc
Confidence 7666655 677799999999999999999975 8999999999999983 234455555654
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.62 E-value=8.9e-16 Score=163.32 Aligned_cols=141 Identities=19% Similarity=0.193 Sum_probs=98.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.-||+|+-|.||+++++ +++.+|+|+.+-++.. ++++++.+|++..++.
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~------------------------------~~~~Qi~rEl~il~~~ 134 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDP------------------------------ALQKQILRELEILRSC 134 (364)
T ss_pred hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCH------------------------------HHHHHHHHHHHHHhhC
Confidence 57999999999999987 8999999998544432 2334444555444433
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCC-CEEEeeEEe-cC-CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEV-DVLIPEVIQ-SS-ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~-~v~vP~v~~-~~-~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
. .+ -|..-..+. .. ...|+|||++|++|+++.... ..+....++....+.+
T Consensus 135 ~------------------------spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~ 189 (364)
T KOG0581|consen 135 Q------------------------SPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRV-GRIPEPVLGKIARAVLR 189 (364)
T ss_pred C------------------------CCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHH
Confidence 1 11 122222222 34 378999999999999985421 3344444444444433
Q ss_pred -HHHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 -AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 -l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+.++|+ ++|+|||+||.||||+.. |+++|+|||.++.+...
T Consensus 190 GL~YLh~~~~IIHRDIKPsNlLvNsk--GeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 190 GLSYLHEERKIIHRDIKPSNLLVNSK--GEVKICDFGVSGILVNS 232 (364)
T ss_pred HHHHHhhccCeeeccCCHHHeeeccC--CCEEeccccccHHhhhh
Confidence 778885 999999999999999975 99999999999988765
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.2e-15 Score=153.94 Aligned_cols=173 Identities=19% Similarity=0.290 Sum_probs=114.9
Q ss_pred eEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCC------CCChHHHHHHHHHHhHhhccHHHHHHHHHH
Q 002927 21 VHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEP------QYDFNPIIDEWCKEAPKELDFNSEAENTRI 94 (864)
Q Consensus 21 V~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~------~~~~~~~~~e~~~~~~~Eld~~~Ea~n~~~ 94 (864)
||.|...+|++||||+-|.+... +.. .......... ......+. .....+|++++.+
T Consensus 2 Vy~~~~~~~~~~a~K~~r~~~~~-Fk~-------~~~y~~~~~r~~~~~~~~~~~~~~---------~~~~~~E~~~L~~ 64 (188)
T PF01163_consen 2 VYHAIDPDGEEVAVKIYRTGRTS-FKR-------RKKYRDYDYRFKKYRHKSSWRYLI---------REWAKKEFRNLKR 64 (188)
T ss_dssp EEEEEECTTEEEEEEEE-S---S-S-H-------HHHHTTTSTTSTTC--G--CHHHH---------HHHHHHHHHHHHH
T ss_pred EEEEECCCCCEEEEEEeccCceE-EEE-------eeeeecccchhcccccccCHHHHH---------HHHHHHHHHHHHH
Confidence 89999889999999998876432 111 1111111100 01111222 2335668999888
Q ss_pred HHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecC--CcCCCChHHHhhcCCCHHHHHHHHHHHHHHHHHhc
Q 002927 95 VSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMD--GIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVD 172 (864)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~--G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~ 172 (864)
+.. .++.||+++..++.+||||||+ |.++..+........+...+...+++.+...+|..
T Consensus 65 l~~------------------~Gv~vP~p~~~~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~ 126 (188)
T PF01163_consen 65 LYE------------------AGVPVPKPYDYNRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKA 126 (188)
T ss_dssp CCC------------------TT-SS--EEEEETTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCT
T ss_pred HHH------------------CCccCCcEEEEeCCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhc
Confidence 643 3588999998889999999999 99998876544334567888888888888888999
Q ss_pred CeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHHcCCC
Q 002927 173 GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 238 (864)
Q Consensus 173 G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~G~~ 238 (864)
|++|+||++.||++.+ ++++|||||.+.....+.-. .++.+|.+.+.+.+...|..
T Consensus 127 givHGDLs~~NIlv~~---~~~~iIDf~qav~~~~p~a~-------~~l~RDi~ni~~fF~~~~~~ 182 (188)
T PF01163_consen 127 GIVHGDLSEYNILVDD---GKVYIIDFGQAVDSSHPNAE-------ELLRRDIENIIRFFKKKGVQ 182 (188)
T ss_dssp TEEESS-STTSEEEET---TCEEE--GTTEEETTSTTHH-------HHHHHHHHHHHHHHHCCC--
T ss_pred CceecCCChhhEEeec---ceEEEEecCcceecCCccHH-------HHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999985 48999999999887754332 34678999999999998874
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.7e-15 Score=162.14 Aligned_cols=145 Identities=23% Similarity=0.308 Sum_probs=100.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-||+|.||.|-.|..+ +|+.|||||.+...-..- +.....+.|..+|+
T Consensus 178 ~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~------------------------------s~~~~~~~~v~~Ei 227 (475)
T KOG0615|consen 178 KTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGC------------------------------SRAIAKTRDVQNEI 227 (475)
T ss_pred eeecCCceeEEEEEEEcccCcEEEeeeeehhhcccc------------------------------cccccchhhhHHHH
Confidence 67999999999999975 899999998763211100 00112344566788
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHH----HHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV----EEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~----~~~~~ 163 (864)
.-+.++.| |+ |.+-..+. ....||||||++|+.|-+... ..+.-++... .+++.
T Consensus 228 eILkkL~H------------------P~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~ 287 (475)
T KOG0615|consen 228 EILKKLSH------------------PNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLT 287 (475)
T ss_pred HHHHhcCC------------------CCEEEEeeeeecCCceEEEEEEecCccHHHHHH--hccccccchhHHHHHHHHH
Confidence 88777644 23 33444454 445599999999999988643 3333333333 33333
Q ss_pred HHHHHHHhcCeeccCCCCCCeEEccC-CCCceEEEecccccccC
Q 002927 164 AYAHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLS 206 (864)
Q Consensus 164 ~~l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~ 206 (864)
+ ++++|+.||.|||+||+|||+..+ .+..++|.|||+++...
T Consensus 288 a-vkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g 330 (475)
T KOG0615|consen 288 A-VKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG 330 (475)
T ss_pred H-HHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccc
Confidence 3 678899999999999999999854 34668999999998774
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.9e-15 Score=171.65 Aligned_cols=154 Identities=18% Similarity=0.265 Sum_probs=106.2
Q ss_pred cccccccccccccceeeEEEEec-CCCEEEEEEecC----ChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHh
Q 002927 5 FMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQ----GIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 79 (864)
Q Consensus 5 F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p----~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~ 79 (864)
+.++-.+-||.|++|+||+++.+ +|+.||||+-++ .-.+....++++++++-
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLn----------------------- 69 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLN----------------------- 69 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcC-----------------------
Confidence 34555678999999999999965 899999998654 22333333444333321
Q ss_pred HhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHH--hhcCCCHHH
Q 002927 80 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESL--EAFGVNKQK 156 (864)
Q Consensus 80 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~--~~~~~~~~~ 156 (864)
..|+.++.. .+.-..+ +. +...||+||||.|++|...+.. ...|+...+
T Consensus 70 ---------h~NIVk~f~-----------------iee~~~~--~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e 121 (732)
T KOG4250|consen 70 ---------HPNIVKLFD-----------------IEETKFL--GLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESE 121 (732)
T ss_pred ---------chhhhhhcc-----------------cCCcccc--CcccccceEEEeecCCCcHHHHhcCcccccCCCHHH
Confidence 112222111 0111111 11 5567999999999999887542 345777778
Q ss_pred HHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCce--EEEecccccccChHH
Q 002927 157 VVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRP--ILLDFGLTKKLSSSM 209 (864)
Q Consensus 157 l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i--~LiDFG~~~~l~~~~ 209 (864)
+...+.++. ++.+|++||+|||||||||++-...+|+. +|+|||+++.+++..
T Consensus 122 ~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s 178 (732)
T KOG4250|consen 122 FLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS 178 (732)
T ss_pred HHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC
Confidence 777776655 88999999999999999999876555664 699999999999865
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.9e-15 Score=148.26 Aligned_cols=138 Identities=22% Similarity=0.371 Sum_probs=101.0
Q ss_pred cccccccceeeEEEEe-cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++||+||||-+|.|.. .+|++||||+-+..... | .+..|+
T Consensus 21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--------------------p-------------------qL~yEs 61 (341)
T KOG1163|consen 21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--------------------P-------------------QLLYES 61 (341)
T ss_pred EeecCCchhheeeeeeccCCceEEEEeecccCCC--------------------c-------------------chhHHH
Confidence 6899999999999995 58999999986543321 1 133466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+-.+.+++ .+-+|.+.+ ....||||+.+ |.+|+++.......+.-..++...-+.+
T Consensus 62 kvY~iL~~-------------------g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml 121 (341)
T KOG1163|consen 62 KVYRILQG-------------------GVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQML 121 (341)
T ss_pred HHHHHhcc-------------------CCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHH
Confidence 66555544 466888875 34579999987 9999999776655555544443333333
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccC-CCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~ 207 (864)
++.+|.++|+|||+||.|+|..-+ ...++.|||||+++..-+
T Consensus 122 ~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 122 SRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred HHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 788999999999999999998532 125799999999987644
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.3e-15 Score=163.67 Aligned_cols=147 Identities=18% Similarity=0.293 Sum_probs=97.1
Q ss_pred ccccccccccccccceeeEEEEec-CCCEEEEEEec-----CChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHH
Q 002927 4 MFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQH-----QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCK 77 (864)
Q Consensus 4 ~F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~-----p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 77 (864)
.|+.+ +-||.|.|||||+|+.. +|+.||+|-.+ ++....+.+++.
T Consensus 118 ~feki--~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~--------------------------- 168 (560)
T KOG0600|consen 118 SFEKI--EKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIK--------------------------- 168 (560)
T ss_pred HHHHH--HHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHH---------------------------
Confidence 45555 45999999999999964 89999999655 333333333333
Q ss_pred HhHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe---cCCceEEEeecCCcCCCChHHHhhc---
Q 002927 78 EAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAF--- 150 (864)
Q Consensus 78 ~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~--- 150 (864)
-++++.| ++ +.+-.+.. ++..|||.||++ .|+..+...
T Consensus 169 -------------ILr~l~H------------------pNIikL~eivt~~~~~siYlVFeYMd----hDL~GLl~~p~v 213 (560)
T KOG0600|consen 169 -------------ILRRLDH------------------PNIIKLEEIVTSKLSGSIYLVFEYMD----HDLSGLLSSPGV 213 (560)
T ss_pred -------------HHHhcCC------------------CcccceeeEEEecCCceEEEEEeccc----chhhhhhcCCCc
Confidence 3333322 11 22222322 567899999998 455433222
Q ss_pred CCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHH
Q 002927 151 GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKM 216 (864)
Q Consensus 151 ~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l 216 (864)
.+...++--.+-+++ +.++|..||+|||+|..||||+.+ |.++|.|||+++.++.+.+..|..-
T Consensus 214 kft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~--G~LKiaDFGLAr~y~~~~~~~~T~r 279 (560)
T KOG0600|consen 214 KFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNN--GVLKIADFGLARFYTPSGSAPYTSR 279 (560)
T ss_pred ccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCC--CCEEeccccceeeccCCCCcccccc
Confidence 233333333333333 778899999999999999999965 9999999999998887766654433
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.8e-14 Score=159.96 Aligned_cols=139 Identities=15% Similarity=0.237 Sum_probs=97.1
Q ss_pred ccccccccceeeEEEEec--CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 10 ETPLATASIAQVHRATLV--DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~--~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
.+.||+|+||+||+|+.+ +|+.||||+..+..... ..+ . ....|.+
T Consensus 23 ~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~-~~~-------------------------~------~~~~~~~ 70 (365)
T PRK09188 23 TAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWW-SKP-------------------------L------ARHLAAR 70 (365)
T ss_pred ccEEeecCcEEEEEEEEcCCCCeEEEEEEeccccccc-ccH-------------------------H------HHHHHHH
Confidence 367999999999999875 57888999765331100 000 0 0112566
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHH
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAH 167 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~ 167 (864)
|++.+.++++ + -.+|.++.....+|||||++|.+|... .. .....++..+++ .+.
T Consensus 71 E~~iL~~L~h------------------~-~iv~~l~~~~~~~LVmE~~~G~~L~~~---~~--~~~~~~~~~i~~-aL~ 125 (365)
T PRK09188 71 EIRALKTVRG------------------I-GVVPQLLATGKDGLVRGWTEGVPLHLA---RP--HGDPAWFRSAHR-ALR 125 (365)
T ss_pred HHHHHHhccC------------------C-CCCcEEEEcCCcEEEEEccCCCCHHHh---Cc--cchHHHHHHHHH-HHH
Confidence 8877777643 1 235666666778999999999988632 11 112344444443 377
Q ss_pred HHHhcCeeccCC-CCCCeEEccCCCCceEEEecccccccCh
Q 002927 168 QIYVDGFFNGDP-HPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 168 ~i~~~G~~H~D~-hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++|..|++|||+ ||+|||++.+ ++++|+|||+++.+.+
T Consensus 126 ~lH~~gIiHrDL~KP~NILv~~~--~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 126 DLHRAGITHNDLAKPQNWLMGPD--GEAAVIDFQLASVFRR 164 (365)
T ss_pred HHHHCCCeeCCCCCcceEEEcCC--CCEEEEECccceeccc
Confidence 899999999999 8999999754 8999999999998865
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.1e-15 Score=164.09 Aligned_cols=154 Identities=20% Similarity=0.288 Sum_probs=104.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-||.|+||.||+|+.+ +|+.||||-.+. ++.. + +|+-=.+|.
T Consensus 16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK~--------------Kf~s----------~------------ee~~nLREv 59 (538)
T KOG0661|consen 16 RKLGDGTFGSVYLAKSKETGELVAIKKMKK--------------KFYS----------W------------EECMNLREV 59 (538)
T ss_pred HHhcCCcceeEEEeeecCCCceeeHHHHHh--------------hhcc----------H------------HHHHHHHHH
Confidence 45999999999999966 899999993211 1111 1 222234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-c-CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S-SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~-~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.++++..+ .--|.+-+|+. . ...++||||++ ..|.++.+-+...+....+...+.+++
T Consensus 60 ksL~kln~h----------------pniikL~Evi~d~~~~L~fVfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqG 122 (538)
T KOG0661|consen 60 KSLRKLNPH----------------PNIIKLKEVIRDNDRILYFVFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQG 122 (538)
T ss_pred HHHHhcCCC----------------CcchhhHHHhhccCceEeeeHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHH
Confidence 555554310 11233344443 2 25679999997 456666555555566677777777776
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh--HHHHHHHHHHHH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS--SMKQALAKMFFA 219 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~--~~r~~~~~l~~a 219 (864)
+..||++||||||+||+||||... .-|+|.|||+++++.. ...+.+..-||.
T Consensus 123 L~hiHk~GfFHRDlKPENiLi~~~--~~iKiaDFGLARev~SkpPYTeYVSTRWYR 176 (538)
T KOG0661|consen 123 LAHIHKHGFFHRDLKPENILISGN--DVIKIADFGLAREVRSKPPYTEYVSTRWYR 176 (538)
T ss_pred HHHHHhcCcccccCChhheEeccc--ceeEecccccccccccCCCcchhhhccccc
Confidence 889999999999999999999843 5799999999998854 345566666654
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.6e-14 Score=146.92 Aligned_cols=142 Identities=19% Similarity=0.262 Sum_probs=101.5
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
++||+|++|.||+|+. +|+.|+||+..+.....-..|.. .....+.+|++
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~-----------------------------~~~~~~~~E~~ 51 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDER-----------------------------IRRERTRREAR 51 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHH-----------------------------HHHHHHHHHHH
Confidence 5799999999999987 78899999877643221111110 01123556777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQ 168 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~ 168 (864)
++.++++ ..+.+|.++. ....+|+|||++|.+|.++..... .....++..+.. .+.+
T Consensus 52 ~l~~l~~------------------~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~~--~~~~~i~~~i~~-~l~~ 110 (211)
T PRK14879 52 IMSRARK------------------AGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSNG--MEELELSREIGR-LVGK 110 (211)
T ss_pred HHHHHHH------------------CCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhcc--HHHHHHHHHHHH-HHHH
Confidence 7777654 2466777764 677899999999999988754211 123345555444 3778
Q ss_pred HHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 169 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 169 i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+|..|++|+|+||+|||++ + +.++|+|||+++...
T Consensus 111 lH~~~i~H~Dl~p~Nil~~-~--~~~~liDf~~a~~~~ 145 (211)
T PRK14879 111 LHSAGIIHGDLTTSNMILS-G--GKIYLIDFGLAEFSK 145 (211)
T ss_pred HHhCCcccCCCCcccEEEE-C--CCEEEEECCcccCCC
Confidence 9999999999999999998 3 789999999988644
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.54 E-value=3e-15 Score=156.36 Aligned_cols=151 Identities=16% Similarity=0.188 Sum_probs=101.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.-|++|+||.||||+.+ +++.||+|-.+++-++. .+.+. ..+|.
T Consensus 82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~--------------------GFPIt---------------sLREI 126 (419)
T KOG0663|consen 82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKE--------------------GFPIT---------------SLREI 126 (419)
T ss_pred hhcccCcceeEEEeccCCcceeEEeeecccccccC--------------------CCcch---------------hHHHH
Confidence 56999999999999986 89999999776544211 12211 33455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHH-hh--cCCCHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESL-EA--FGVNKQKVVEEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~-~~--~~~~~~~l~~~~~~ 163 (864)
.-+.+++| ...|.|-+|.- -.+.+||||||+ .|+..+ +. ..+...++--...+
T Consensus 127 niLl~~~H-----------------~NIV~vkEVVvG~~~d~iy~VMe~~E----hDLksl~d~m~q~F~~~evK~L~~Q 185 (419)
T KOG0663|consen 127 NILLKARH-----------------PNIVEVKEVVVGSNMDKIYIVMEYVE----HDLKSLMETMKQPFLPGEVKTLMLQ 185 (419)
T ss_pred HHHHhcCC-----------------CCeeeeEEEEeccccceeeeeHHHHH----hhHHHHHHhccCCCchHHHHHHHHH
Confidence 55555443 12355666664 246789999998 454332 11 12333333223333
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH---HHHHHHHHHHH
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS---MKQALAKMFFA 219 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~---~r~~~~~l~~a 219 (864)
.+ ++.+|.+.|+||||||+|+|+... |.+++.|||+++.+... ....++.+||.
T Consensus 186 lL~glk~lH~~wilHRDLK~SNLLm~~~--G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYR 244 (419)
T KOG0663|consen 186 LLRGLKHLHDNWILHRDLKTSNLLLSHK--GILKIADFGLAREYGSPLKPYTPLVVTLWYR 244 (419)
T ss_pred HHHHHHHHhhceeEecccchhheeeccC--CcEEecccchhhhhcCCcccCcceEEEeeec
Confidence 33 888999999999999999999966 99999999999998776 44445555654
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.6e-13 Score=140.81 Aligned_cols=139 Identities=22% Similarity=0.275 Sum_probs=97.7
Q ss_pred cccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHHHH
Q 002927 13 LATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENT 92 (864)
Q Consensus 13 lasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n~ 92 (864)
|++|++|.||+|.. +|++|+||+..+.....-..|.. .+.-.+.+|.+++
T Consensus 2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~-----------------------------~~~~~~~~E~~~l 51 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDER-----------------------------IRRERTRNEARLL 51 (199)
T ss_pred CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHH-----------------------------HHHHHHHHHHHHH
Confidence 78999999999984 78999999865432111000100 0011245677777
Q ss_pred HHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHHHH
Q 002927 93 RIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 170 (864)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~i~ 170 (864)
.++++. .+.+|.++. ....+|+|||++|.+|.++..... ..++..+... +..+|
T Consensus 52 ~~l~~~------------------~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~-----~~~~~~i~~~-l~~lH 107 (199)
T TIGR03724 52 SRARKA------------------GVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGN-----DELLREIGRL-VGKLH 107 (199)
T ss_pred HHHHHC------------------CCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcH-----HHHHHHHHHH-HHHHH
Confidence 777652 356777775 566799999999999987643211 1455555544 66899
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
..|++|+|+||+||+++ + ++++++|||+++...+.
T Consensus 108 ~~gi~H~Dl~~~Nil~~-~--~~~~liDfg~a~~~~~~ 142 (199)
T TIGR03724 108 KAGIVHGDLTTSNIIVR-D--DKLYLIDFGLGKYSDEI 142 (199)
T ss_pred HCCeecCCCCcceEEEE-C--CcEEEEECCCCcCCCcH
Confidence 99999999999999998 3 79999999998875543
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.9e-14 Score=158.25 Aligned_cols=184 Identities=15% Similarity=0.129 Sum_probs=118.7
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChH--HHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIK--TIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~--~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
.+.||.|+||||-+|..+ +++.|||||.+-... .+..
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~---------------------------------------- 230 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQ---------------------------------------- 230 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHH----------------------------------------
Confidence 368999999999999975 899999999764322 1111
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEI 161 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~ 161 (864)
.|.+-++++++.- .....++-+.++ ....+||.|.+ +..|.++.+..+ .|+....+...+
T Consensus 231 ~Ei~iL~~ln~~d--------------~~~~~n~Vrm~d~F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~ 295 (586)
T KOG0667|consen 231 IEIRILELLNKHD--------------PDDKYNIVRMLDYFYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFA 295 (586)
T ss_pred HHHHHHHHHhccC--------------CCCCeeEEEeeeccccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHH
Confidence 2444445554210 112234444543 67889999988 577777765432 345544333333
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHHcCCCc
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRL 239 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~G~~~ 239 (864)
.+++ |..||+.|||||||||+|||+..-...+|++||||.+...++..-..+ ...+.+.-++++.+....
T Consensus 296 ~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vytYi--------QSRfYRAPEVILGlpY~~ 367 (586)
T KOG0667|consen 296 QQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVYTYI--------QSRFYRAPEVILGLPYDT 367 (586)
T ss_pred HHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCcceeee--------eccccccchhhccCCCCC
Confidence 3332 667899999999999999999754446899999999998776543222 233344556666555555
Q ss_pred CCCcHHHHHHHHHHHHh
Q 002927 240 RLDVPEQAMEVSTLFFR 256 (864)
Q Consensus 240 ~~~~~~~~~~~~~~~~~ 256 (864)
..|+=-+-.-+++++..
T Consensus 368 ~IDmWSLGCIlAEL~tG 384 (586)
T KOG0667|consen 368 AIDMWSLGCILAELFTG 384 (586)
T ss_pred ccceeehhhhHHhHhcC
Confidence 55655555556666654
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.1e-14 Score=146.08 Aligned_cols=144 Identities=21% Similarity=0.261 Sum_probs=98.6
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+-+|+|.+|.||+|+.. +|+.||||-.+.+-.+ +.+..+..+|+.+.+|
T Consensus 7 ~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~k-----------------------------dGi~~talREIK~Lqe 57 (318)
T KOG0659|consen 7 LEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAK-----------------------------DGINRTALREIKLLQE 57 (318)
T ss_pred hhhhcCcceEEEEEEEecCCCcEEEEEEeeccccc-----------------------------cCccHHHHHHHHHHHH
Confidence 367999999999999965 8999999977654211 1112223345555555
Q ss_pred HH--HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHH---hhcCCCHHHHHHHHHH
Q 002927 89 AE--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITR 163 (864)
Q Consensus 89 a~--n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~---~~~~~~~~~l~~~~~~ 163 (864)
.+ |+-.+...|. ..+...||.||++ +|++.. ...-+.+..+-..+..
T Consensus 58 l~h~nIi~LiD~F~------------------------~~~~l~lVfEfm~----tdLe~vIkd~~i~l~pa~iK~y~~m 109 (318)
T KOG0659|consen 58 LKHPNIIELIDVFP------------------------HKSNLSLVFEFMP----TDLEVVIKDKNIILSPADIKSYMLM 109 (318)
T ss_pred ccCcchhhhhhhcc------------------------CCCceEEEEEecc----ccHHHHhcccccccCHHHHHHHHHH
Confidence 54 2333322221 0345569999998 455432 2233455666665555
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHH
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQA 212 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~ 212 (864)
.+ +..+|++.|+|||+||.|+|++++ |.++|.|||+++.+....+..
T Consensus 110 ~LkGl~y~H~~~IlHRDlKPnNLLis~~--g~lKiADFGLAr~f~~p~~~~ 158 (318)
T KOG0659|consen 110 TLKGLAYCHSKWILHRDLKPNNLLISSD--GQLKIADFGLARFFGSPNRIQ 158 (318)
T ss_pred HHHHHHHHHhhhhhcccCCccceEEcCC--CcEEeecccchhccCCCCccc
Confidence 55 788899999999999999999966 999999999999887655443
|
|
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.2e-15 Score=154.46 Aligned_cols=147 Identities=18% Similarity=0.233 Sum_probs=111.5
Q ss_pred CccccccccccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHh
Q 002927 1 MGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 79 (864)
Q Consensus 1 ~~~~F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~ 79 (864)
++|+|.-+++ ||.||+|.||+|.++ +|+.||||-.. ++.| +.+++.|+.
T Consensus 31 PEEVFDi~~K--LGEGSYGSV~KAIH~EsG~v~AIK~VP------V~sD-------------------LQEIIKEIS--- 80 (502)
T KOG0574|consen 31 PEEVFDIVGK--LGEGSYGSVHKAIHRESGHVLAIKKVP------VDTD-------------------LQEIIKEIS--- 80 (502)
T ss_pred hHHHHHHHHH--hcCCcchHHHHHHHhccCcEEEEEecC------ccch-------------------HHHHHHHHH---
Confidence 3577777654 999999999999987 89999999432 1222 333343322
Q ss_pred HhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHH
Q 002927 80 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQ 155 (864)
Q Consensus 80 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~ 155 (864)
-++++.. -+|-+.|. .+..++|||||..++++|+.+++...+...
T Consensus 81 -----------IMQQC~S--------------------~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~ 129 (502)
T KOG0574|consen 81 -----------IMQQCKS--------------------KYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQ 129 (502)
T ss_pred -----------HHHHcCC--------------------chhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHH
Confidence 2222211 11222221 577889999999999999999888888888
Q ss_pred HHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHH
Q 002927 156 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 210 (864)
Q Consensus 156 ~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 210 (864)
+++..+-..+ ++.+|...-+|||+|.||||++.+ |..+|.|||.++++++.+.
T Consensus 130 EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~--G~AKLADFGVAGQLTDTMA 184 (502)
T KOG0574|consen 130 EISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTD--GIAKLADFGVAGQLTDTMA 184 (502)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEccc--chhhhhhccccchhhhhHH
Confidence 8888777766 888999999999999999999976 8999999999999998764
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.5e-14 Score=149.62 Aligned_cols=150 Identities=21% Similarity=0.259 Sum_probs=93.7
Q ss_pred cccccccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 5 FMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 5 F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
|+.+|. ||.|++|.||+|+.+ +|+.||+|.++-..++.- .| ..
T Consensus 13 ~~~~ek--lGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG-----------------~P------------~t----- 56 (323)
T KOG0594|consen 13 YEKVEK--LGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEG-----------------VP------------ST----- 56 (323)
T ss_pred HHHHHH--hCCCCceEEEEEEEecCCCEEEEEEEeccccccC-----------------CC------------ch-----
Confidence 455544 999999999999976 899999998764322100 00 00
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cC------CceEEEeecCCcCCCChHHHhh---cCCC
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SS------ETVLILEFMDGIRLNDCESLEA---FGVN 153 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~------~~vLvmE~i~G~~L~~~~~~~~---~~~~ 153 (864)
-.+|..-++++++. .+ .+.+-.+.. .+ .-+||+||++ .+|.++..... .+.+
T Consensus 57 -aiREisllk~L~~~---------------~~-iv~L~dv~~~~~~~~~~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~ 118 (323)
T KOG0594|consen 57 -AIREISLLKRLSHA---------------NH-IVRLHDVIHTSNNHRGIGKLYLVFEFLD-RDLKKYMDSLPKKPQGLP 118 (323)
T ss_pred -hhHHHHHHHHhCCC---------------cc-eEEEEeeeeecccccccceEEEEEEeec-ccHHHHHHhccccccCCC
Confidence 11233333444331 01 233444444 22 5679999998 33443332222 2455
Q ss_pred HHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHH
Q 002927 154 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 210 (864)
Q Consensus 154 ~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 210 (864)
...+-..+.+++ +..+|++||+|||+||.||+|+++ |.++|+|||+++.+.-..+
T Consensus 119 ~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~--G~lKlaDFGlAra~~ip~~ 175 (323)
T KOG0594|consen 119 PRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSS--GVLKLADFGLARAFSIPMR 175 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCC--CcEeeeccchHHHhcCCcc
Confidence 433333333333 777899999999999999999975 9999999999986663333
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.9e-14 Score=155.17 Aligned_cols=142 Identities=26% Similarity=0.320 Sum_probs=98.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH-HHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF-NSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~-~~E 88 (864)
+-||.|||++|++|+.+ +++++||||.-... + +.| +-++| .+|
T Consensus 79 ~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~-------------I----------------ike------~KvkYV~~E 123 (604)
T KOG0592|consen 79 KILGEGSYSTVVLAREKATGKEYAIKVLDKRY-------------I----------------IKE------KKVKYVTRE 123 (604)
T ss_pred heeccccceeEEEeeecCCCceeeHhhhhHHH-------------H----------------Hhh------cccchhhHH
Confidence 56999999999999976 89999999753211 0 000 11122 234
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHH----H
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE----E 160 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~----~ 160 (864)
-..+.++.+ ++ .|-++|. ....|.|+||++++.|-+++. +.|.--+.+++ .
T Consensus 124 k~~l~~L~~-----------------hP--givkLy~TFQD~~sLYFvLe~A~nGdll~~i~--K~Gsfde~caR~YAAe 182 (604)
T KOG0592|consen 124 KEALTQLSG-----------------HP--GIVKLYFTFQDEESLYFVLEYAPNGDLLDLIK--KYGSFDETCARFYAAE 182 (604)
T ss_pred HHHHHHhhC-----------------CC--CeEEEEEEeecccceEEEEEecCCCcHHHHHH--HhCcchHHHHHHHHHH
Confidence 445555532 22 2345554 677899999999999988743 33321122222 2
Q ss_pred HHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHH
Q 002927 161 ITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 211 (864)
Q Consensus 161 ~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 211 (864)
++. .++.||..||||||+||+|||++.| |+++|.|||.++.+++....
T Consensus 183 Ild-AleylH~~GIIHRDlKPENILLd~d--mhikITDFGsAK~l~~~~~~ 230 (604)
T KOG0592|consen 183 ILD-ALEYLHSNGIIHRDLKPENILLDKD--GHIKITDFGSAKILSPSQKS 230 (604)
T ss_pred HHH-HHHHHHhcCceeccCChhheeEcCC--CcEEEeeccccccCChhhcc
Confidence 222 2889999999999999999999966 99999999999999987654
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.5e-14 Score=162.38 Aligned_cols=137 Identities=17% Similarity=0.199 Sum_probs=99.3
Q ss_pred cccccccceeeEEEEe-cCCCEEEEEEec------CChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 11 TPLATASIAQVHRATL-VDGRQVVVKVQH------QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 11 ~plasaSigqV~~A~l-~~G~~VAVKv~~------p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
+-||.|+||+||+++. .+|+.||+||.. ++..+.+..++++.+
T Consensus 24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr------------------------------ 73 (592)
T KOG0575|consen 24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHR------------------------------ 73 (592)
T ss_pred eeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHH------------------------------
Confidence 5799999999999997 689999999853 333333333332211
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHH
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 161 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~ 161 (864)
.+. +++ |.+-..++ +..-|||.|+|+-.+|..+.+ ++..+...++...+
T Consensus 74 ----------~L~------------------HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~K-rrk~ltEpEary~l 124 (592)
T KOG0575|consen 74 ----------SLK------------------HPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLK-RRKPLTEPEARYFL 124 (592)
T ss_pred ----------hcC------------------CCcEEeeeeEeecCCceEEEEEecCCccHHHHHH-hcCCCCcHHHHHHH
Confidence 111 111 22222223 556689999999999998876 45566666666655
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
.+++ +..+|.+||+|||||-||||++++ ..++|.|||++..+..+
T Consensus 125 ~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~--~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 125 RQIVEGLKYLHSLGIIHRDLKLGNLFLNEN--MNVKIGDFGLATQLEYD 171 (592)
T ss_pred HHHHHHHHHHHhcCceecccchhheeecCc--CcEEecccceeeeecCc
Confidence 5555 888999999999999999999965 89999999999998743
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.2e-13 Score=138.14 Aligned_cols=177 Identities=15% Similarity=0.156 Sum_probs=117.5
Q ss_pred cccccccceeeEEEEecC-------CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHh---h---CCCCChHHHHHHHHH
Q 002927 11 TPLATASIAQVHRATLVD-------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAW---A---EPQYDFNPIIDEWCK 77 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~-------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~---~---~~~~~~~~~~~e~~~ 77 (864)
-+|++|-=+-||.|...+ +..|||||-|....+- + ....++.. + ..+.+...++..+.
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~F-----k---~~~~y~~~~~rf~~~~~k~~~~~~~~~wa- 73 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEF-----K---NRDKYIKDDYRFKDRFSKLNPRKIIRMWA- 73 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeE-----c---ChhhhccCCcccccCcCCCCHHHHHHHHH-
Confidence 468999999999998653 4899999988554321 1 01111110 0 01123444555444
Q ss_pred HhHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCC---H
Q 002927 78 EAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVN---K 154 (864)
Q Consensus 78 ~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~ 154 (864)
.+|++++.+++.. ++.||+++...+.+|||||+.|..+... .+.....+ .
T Consensus 74 --------~kE~r~L~rl~~~------------------Gv~vP~pi~~~~~~lvME~Ig~~~~~~~-~Lkd~~~~~~~~ 126 (197)
T cd05146 74 --------EKEMHNLKRMQKA------------------GIPCPEVVVLKKHVLVMSFIGDDQVPAP-KLKDAKLNDEEM 126 (197)
T ss_pred --------HHHHHHHHHHHHc------------------CCCCCeEEEecCCEEEEEEcCCCCccch-hhhccccCHHHH
Confidence 3599999998763 5889999998999999999987533211 11111222 2
Q ss_pred HHHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 002927 155 QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFA 233 (864)
Q Consensus 155 ~~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~ 233 (864)
..+...++..+..++|..|++|+||+|.|||+.+ ++++|||||.+...+...-..+ +.+|.+.+.+.+.
T Consensus 127 ~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~~---~~v~iIDF~qav~~~hp~a~~~-------l~RD~~ni~~fF~ 195 (197)
T cd05146 127 KNAYYQVLSMMKQLYKECNLVHADLSEYNMLWHD---GKVWFIDVSQSVEPTHPHGLEF-------LFRDCRNVIQFFQ 195 (197)
T ss_pred HHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEC---CcEEEEECCCceeCCCCCHHHH-------HHHHHHHHHHHhc
Confidence 3445555655555568999999999999999973 6899999999998876544333 4567766666553
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.2e-14 Score=149.37 Aligned_cols=143 Identities=18% Similarity=0.225 Sum_probs=96.1
Q ss_pred cccccc-cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhh
Q 002927 5 FMDFVE-TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 82 (864)
Q Consensus 5 F~~fd~-~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 82 (864)
.++|+- +.||.||||+|+.++.+ +|+.+|+||.+... .++. .|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~--iv~~---------------------------------~e 68 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKK--IVEK---------------------------------KE 68 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhH--hhhh---------------------------------hh
Confidence 456664 78999999999999976 79999999865311 0000 01
Q ss_pred cc-HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHH
Q 002927 83 LD-FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 158 (864)
Q Consensus 83 ld-~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~ 158 (864)
++ ...|..-+.++++ ++.|.-.|. .++.+||+||+.|+.|.-.+.. +..+......
T Consensus 69 ~~~~~~Er~IL~~v~h-------------------PFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~-eg~F~E~~ar 128 (357)
T KOG0598|consen 69 VRHTKAERNILSKIKH-------------------PFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQR-EGRFSEDRAR 128 (357)
T ss_pred HHHHHHHHHHHHhCCC-------------------CcEeeeEEecccCCeEEEEEeccCCccHHHHHHh-cCCcchhHHH
Confidence 11 1223333333322 344555553 5678999999999998765431 2223332222
Q ss_pred HHHHH--HHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 159 EEITR--AYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 159 ~~~~~--~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
-.+++ +.+..+|+.||+|||+||+|||++.+ |.++|.|||+++.
T Consensus 129 fYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~--GHi~LtDFgL~k~ 174 (357)
T KOG0598|consen 129 FYLAEIVLALGYLHSKGIIYRDLKPENILLDEQ--GHIKLTDFGLCKE 174 (357)
T ss_pred HHHHHHHHHHHHHHhCCeeeccCCHHHeeecCC--CcEEEeccccchh
Confidence 23333 33889999999999999999999976 9999999999984
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.1e-13 Score=142.85 Aligned_cols=146 Identities=18% Similarity=0.234 Sum_probs=99.0
Q ss_pred ccccc-cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 6 MDFVE-TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 6 ~~fd~-~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
++|+. .-||.||||.||..+.+ +|.-+|+||+....- + + ++.+.
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~v--V--k---lKQve--------------------------- 89 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKV--V--K---LKQVE--------------------------- 89 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHH--H--H---HHHHH---------------------------
Confidence 34553 68999999999999987 799999998652110 0 0 00000
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCC--HHHH
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVN--KQKV 157 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~--~~~l 157 (864)
--.+|-+-+.+..+ ..+-+++. .+..+|||||++|+.|..+.+.. ..++ ..++
T Consensus 90 H~~nEk~vL~~v~~--------------------PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~-~rF~e~~arF 148 (355)
T KOG0616|consen 90 HTHNEKRVLKAVSH--------------------PFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKS-GRFSEPHARF 148 (355)
T ss_pred HHhhHHHHHhhccC--------------------ceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhc-CCCCchhHHH
Confidence 01234444444322 12233332 46678999999999998875421 1232 2333
Q ss_pred HHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 158 VEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 158 ~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
...-+-+.++.||..++++||+||+|||++.+ |.|+++|||.+++++..
T Consensus 149 YAAeivlAleylH~~~iiYRDLKPENiLlD~~--G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 149 YAAEIVLALEYLHSLDIIYRDLKPENLLLDQN--GHIKITDFGFAKRVSGR 197 (355)
T ss_pred HHHHHHHHHHHHHhcCeeeccCChHHeeeccC--CcEEEEeccceEEecCc
Confidence 33344445899999999999999999999976 99999999999999875
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.9e-13 Score=135.78 Aligned_cols=159 Identities=16% Similarity=0.146 Sum_probs=107.5
Q ss_pred ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 10 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.+.|.+++||.||.+.. .|++|+.+-..- +-..++.++ . . -+.+|+
T Consensus 7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~--------~~~~~~~~~--------------------~----~-l~~rE~ 52 (218)
T PRK12274 7 NEPLKSDTFGRILLVRG-GERKFVRRDLSA--------APWWLRGVA--------------------W----W-LARREA 52 (218)
T ss_pred ceeecCCCcceEEEeec-CCceeeeccccc--------chhhhhhHH--------------------H----H-HHHHHH
Confidence 36799999999998775 778888663211 000000000 0 0 156688
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQI 169 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~i 169 (864)
+.+.++.+ ...+|+++.....+++|||++|.+|.+... . ....+...+.+ .++++
T Consensus 53 ~iL~~L~~-------------------~~~vP~ll~~~~~~lvmeyI~G~~L~~~~~--~---~~~~~~~qi~~-~L~~l 107 (218)
T PRK12274 53 LALRQLDG-------------------LPRTPRLLHWDGRHLDRSYLAGAAMYQRPP--R---GDLAYFRAARR-LLQQL 107 (218)
T ss_pred HHHHhcCC-------------------CCCCCEEEEEcCEEEEEeeecCccHHhhhh--h---hhHHHHHHHHH-HHHHH
Confidence 88877643 245788876566899999999999865421 1 11233444443 47789
Q ss_pred HhcCeeccCC-CCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 002927 170 YVDGFFNGDP-HPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAE 234 (864)
Q Consensus 170 ~~~G~~H~D~-hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~ 234 (864)
|..|++|+|+ ||+|||++.+ |+++|||||++....+.-+ ...-+..+|...+.+.++.
T Consensus 108 H~~GIvHrDL~kp~NILv~~~--g~i~LIDFG~A~~~~~~~~-----~~r~L~~rDl~~llk~~~~ 166 (218)
T PRK12274 108 HRCGVAHNDLAKEANWLVQED--GSPAVIDFQLAVRGNPRAR-----WMRLLAREDLRHLLKHKRM 166 (218)
T ss_pred HHCcCccCCCCCcceEEEcCC--CCEEEEECCCceecCCcch-----HHHHHHHHHHHHHHHHHHh
Confidence 9999999999 7999999854 8999999999987665333 1222335899999988866
|
|
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.8e-13 Score=154.08 Aligned_cols=141 Identities=17% Similarity=0.201 Sum_probs=95.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||+.+..... .. +.... +..|.
T Consensus 7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~--------------------------~~~~~------~~~E~ 52 (363)
T cd05628 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADML--EK--------------------------EQVGH------IRAER 52 (363)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHH--Hh--------------------------hHHHH------HHHHH
Confidence 67999999999999976 7999999987632100 00 00011 22343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++.+ ..|++++. ....+|||||++|++|.++... ...++...+...+.+++
T Consensus 53 ~il~~~~~--------------------~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~ 111 (363)
T cd05628 53 DILVEADS--------------------LWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMK-KDTLTEEETQFYIAETV 111 (363)
T ss_pred HHHHhCCC--------------------CCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHH
Confidence 33333211 12333332 4567899999999999887542 23455555555444444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..||+|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 112 ~aL~~lH~~givHrDlKp~NILi~~~--~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 112 LAIDSIHQLGFIHRDIKPDNLLLDSK--GHVKLSDFGLCTGLKKA 154 (363)
T ss_pred HHHHHHHhCCeEecCCCHHHeEECCC--CCEEEeeccCccccccc
Confidence 788999999999999999999865 89999999999877554
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.6e-13 Score=152.51 Aligned_cols=140 Identities=17% Similarity=0.144 Sum_probs=103.8
Q ss_pred ccccccceeeEEEEecCCCE-EEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 12 PLATASIAQVHRATLVDGRQ-VVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 12 plasaSigqV~~A~l~~G~~-VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
-+|+|++|+||+|.++ |+. ||||+..+.-...-. +-+|.+|+.
T Consensus 48 ~iG~G~~g~V~~~~~~-g~~~vavK~~~~~~~~~~~-----------------------------------~~~f~~E~~ 91 (362)
T KOG0192|consen 48 VLGSGSFGTVYKGKWR-GTDVVAVKIISDPDFDDES-----------------------------------RKAFRREAS 91 (362)
T ss_pred hcccCCceeEEEEEeC-CceeEEEEEecchhcChHH-----------------------------------HHHHHHHHH
Confidence 4999999999999984 666 999987653221100 224777888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEecC--CceEEEeecCCcCCCChHHH-hhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQSS--ETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~~~--~~vLvmE~i~G~~L~~~~~~-~~~~~~~~~l~~~~~~~~- 165 (864)
-+.+++| ++| .+.-+.... ...|||||++|++|.++... ....++....+..+.++.
T Consensus 92 il~~l~H------------------pNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiAr 153 (362)
T KOG0192|consen 92 LLSRLRH------------------PNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIAR 153 (362)
T ss_pred HHHhCCC------------------CCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHH
Confidence 8888654 222 222222222 36899999999999998765 356677777777777766
Q ss_pred -HHHHHhcC-eeccCCCCCCeEEccCCCC-ceEEEecccccccCh
Q 002927 166 -AHQIYVDG-FFNGDPHPGNFLVSKDPPH-RPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G-~~H~D~hPgNIlv~~~~~g-~i~LiDFG~~~~l~~ 207 (864)
+..+|..+ ||||||||.||||+.+ + .++|.|||+++....
T Consensus 154 Gm~YLH~~~~iIHrDLK~~NiLv~~~--~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 154 GMEYLHSEGPIIHRDLKSDNILVDLK--GKTLKIADFGLSREKVI 196 (362)
T ss_pred HHHHHhcCCCeeecccChhhEEEcCC--CCEEEECCCccceeecc
Confidence 88999999 9999999999999965 6 899999999976654
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.4e-13 Score=152.17 Aligned_cols=146 Identities=17% Similarity=0.215 Sum_probs=98.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||.|+.|+.. +|+.||||+........ + . ..+. +. ..+|.
T Consensus 23 ~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~---~---------------~-~~~~-------~~------i~rEi 70 (370)
T KOG0583|consen 23 RTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSS---K---------------S-QKLD-------EL------IKREI 70 (370)
T ss_pred eeecCCCCeeEEEeeeccCCCeEEEEEechhcccc---c---------------c-cccc-------hh------hHHHH
Confidence 78999999999999865 89999999865320000 0 0 0000 01 11455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
.++++++.. .-.+.+-+++. .+..++||||+.|+.|.+.... ...+..........+++ +
T Consensus 71 ~~~~~~~~H----------------pnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav 133 (370)
T KOG0583|consen 71 SILRRLRSH----------------PNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAV 133 (370)
T ss_pred HHHHHhccC----------------CCEeEEEEEEecCCeEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHH
Confidence 666666520 11244555555 5678999999999888887653 33444433333333332 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.++|..|++|||+||+||+++.++ +.++|+|||++....
T Consensus 134 ~y~H~~gi~HRDLK~ENilld~~~-~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 134 AYCHSRGIVHRDLKPENILLDGNE-GNLKLSDFGLSAISP 172 (370)
T ss_pred HHHHhCCEeeCCCCHHHEEecCCC-CCEEEeccccccccC
Confidence 888999999999999999998643 899999999998773
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.2e-13 Score=151.43 Aligned_cols=143 Identities=18% Similarity=0.198 Sum_probs=94.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+...... .. ..-.+..|.
T Consensus 7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~------------------------------~~~~~~~e~ 52 (333)
T cd05600 7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFK----LN------------------------------EVRHVLTER 52 (333)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhh----hh------------------------------HHHHHHHHH
Confidence 67999999999999986 69999999876422110 00 000133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+-..+. ....+|||||++|.+|.++... ...+....+...+.+++ +
T Consensus 53 ~~l~~~~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l 114 (333)
T cd05600 53 DILTTTKSE-----------------WLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNN-LGVLSEDHARFYMAEMFEAV 114 (333)
T ss_pred HHHHhCCCC-----------------CCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHH
Confidence 444443211 0111222222 4567899999999999887542 22344444444443433 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|+||.||+++.+ +.++|+|||++.....
T Consensus 115 ~~lH~~~ivH~dlkp~Nil~~~~--~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 115 DALHELGYIHRDLKPENFLIDAS--GHIKLTDFGLSKGIVT 153 (333)
T ss_pred HHHHHCCccccCCCHHHEEECCC--CCEEEEeCcCCccccc
Confidence 88999999999999999999865 8999999999876543
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.5e-13 Score=152.67 Aligned_cols=141 Identities=17% Similarity=0.205 Sum_probs=95.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+..-. ... +... .+..|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~--------------------------~~~~------~~~~e~ 52 (360)
T cd05627 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADM--LEK--------------------------EQVA------HIRAER 52 (360)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHH--hhh--------------------------hhHH------HHHHHH
Confidence 67999999999999976 799999998763210 000 0001 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++.+ + .+++++. ....+|||||++|.+|.++... ...+....+...+.+++
T Consensus 53 ~~l~~l~~------------------~--~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~ 111 (360)
T cd05627 53 DILVEADG------------------A--WVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMK-KDTLSEEATQFYIAETV 111 (360)
T ss_pred HHHHhCCC------------------C--CEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHh-cCCCCHHHHHHHHHHHH
Confidence 33333211 1 2333332 4567899999999999887532 23345444444444433
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|||+||+|||++.+ |.++|+|||++..+...
T Consensus 112 ~~L~~lH~~givHrDLkp~NIli~~~--~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 112 LAIDAIHQLGFIHRDIKPDNLLLDAK--GHVKLSDFGLCTGLKKA 154 (360)
T ss_pred HHHHHHHHCCeEccCCCHHHEEECCC--CCEEEeeccCCcccccc
Confidence 788999999999999999999865 89999999998876543
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.8e-13 Score=149.96 Aligned_cols=138 Identities=14% Similarity=0.087 Sum_probs=91.8
Q ss_pred ccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 12 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 12 plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
.||+|++|.||+|+.+ +|+.||||+.+...... ..+ ...+.+|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~---------------------------------~~~~~~e~~ 47 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIA-KDE---------------------------------VAHTLTESR 47 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hHH---------------------------------HHHHHHHHH
Confidence 5899999999999975 79999999876421100 000 001233555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
.+.++.+ +. +.+-..+. ....+|||||++|.+|.+.... ........+...+.+++ +
T Consensus 48 ~l~~l~h------------------p~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L 108 (323)
T cd05571 48 VLQNTRH------------------PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSAL 108 (323)
T ss_pred HHHhCCC------------------CCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHH
Confidence 5444422 11 11222222 4567899999999999766432 22344444444444433 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
..+|..|++|||+||.||+++.+ +.++|+|||+++.
T Consensus 109 ~~lH~~~ivHrDlkp~NIll~~~--~~~kl~DfG~a~~ 144 (323)
T cd05571 109 GYLHSCDVVYRDLKLENLMLDKD--GHIKITDFGLCKE 144 (323)
T ss_pred HHHHhCCeEeCCCCHHHEEECCC--CCEEEeeCCCCcc
Confidence 88999999999999999999865 8999999998864
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.3e-13 Score=154.21 Aligned_cols=139 Identities=14% Similarity=0.129 Sum_probs=92.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+.... .. .+... .+.+|.
T Consensus 7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~--~~--------------------------~~~~~------~~~~E~ 52 (381)
T cd05626 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDV--LN--------------------------RNQVA------HVKAER 52 (381)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh--hh--------------------------hHHHH------HHHHHH
Confidence 56999999999999975 799999998753110 00 00000 133444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH-
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA- 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~- 164 (864)
..+.++.+ + .|.+++. ....+|||||++|++|.++... ........+...+.++
T Consensus 53 ~il~~l~h------------------~--~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~ 111 (381)
T cd05626 53 DILAEADN------------------E--WVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-MEVFPEVLARFYIAELT 111 (381)
T ss_pred HHHHhcCC------------------C--CeeeeEEEEecCCEEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHH
Confidence 44444322 1 2333332 4567899999999999877532 2233433333333333
Q ss_pred -HHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 165 -YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 165 -~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+..+|..||+|||+||.|||++.+ ++++|+|||++..+.
T Consensus 112 ~aL~~LH~~givHrDlKp~Nili~~~--~~~kL~DFGl~~~~~ 152 (381)
T cd05626 112 LAIESVHKMGFIHRDIKPDNILIDLD--GHIKLTDFGLCTGFR 152 (381)
T ss_pred HHHHHHHhCCeeecCCcHHHEEECCC--CCEEEeeCcCCcccc
Confidence 2788999999999999999999865 899999999987654
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.9e-13 Score=150.26 Aligned_cols=140 Identities=14% Similarity=0.099 Sum_probs=93.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.++..... ..+ ...+.+|.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~---------------------------------~~~~~~E~ 46 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIA-KDE---------------------------------VAHTLTES 46 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhH---------------------------------HHHHHHHH
Confidence 35899999999999976 79999999976432100 000 01133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.+ +.+ .+-..+. ....+|||||++|.+|.+.... ...+....+...+.+++
T Consensus 47 ~~l~~l~h------------------p~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~a 107 (328)
T cd05593 47 RVLKNTRH------------------PFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSR-ERVFSEDRTRFYGAEIVSA 107 (328)
T ss_pred HHHHhCCC------------------CCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHH
Confidence 54444322 111 1112222 4567899999999999765432 22345555544444443
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..|++|||+||.|||++.+ +.++|+|||+++..
T Consensus 108 L~~LH~~~ivHrDikp~NIll~~~--~~~kL~DfG~~~~~ 145 (328)
T cd05593 108 LDYLHSGKIVYRDLKLENLMLDKD--GHIKITDFGLCKEG 145 (328)
T ss_pred HHHHHhCCeEecccCHHHeEECCC--CcEEEecCcCCccC
Confidence 788999999999999999999865 89999999998753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.1e-13 Score=145.71 Aligned_cols=144 Identities=15% Similarity=0.133 Sum_probs=97.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|..+ +|+.||||+.+....... ..+..+.+|.
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~----------------------------------~~~~~~~~E~ 51 (285)
T cd05631 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR----------------------------------KGEAMALNEK 51 (285)
T ss_pred EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhh----------------------------------hhHHHHHHHH
Confidence 67999999999999975 899999998654321110 0111244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.+. ..+.+...+. ....+++|||++|.+|.+..... ....+...+...+.+++
T Consensus 52 ~il~~l~~~-----------------~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~ 114 (285)
T cd05631 52 RILEKVNSR-----------------FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCG 114 (285)
T ss_pred HHHHhcCCC-----------------cEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHH
Confidence 665554321 1122223332 45678999999999997664322 12355555555544444
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||.||+++.+ +.++|+|||++..++.
T Consensus 115 l~~lH~~~iiH~dikp~Nill~~~--~~~kl~Dfg~~~~~~~ 154 (285)
T cd05631 115 LEDLQRERIVYRDLKPENILLDDR--GHIRISDLGLAVQIPE 154 (285)
T ss_pred HHHHHhCCEEeCCCCHHHEEECCC--CCEEEeeCCCcEEcCC
Confidence 788999999999999999999865 8999999999887643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.8e-12 Score=131.45 Aligned_cols=183 Identities=21% Similarity=0.245 Sum_probs=131.0
Q ss_pred ccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHHH
Q 002927 12 PLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 91 (864)
Q Consensus 12 plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n 91 (864)
+|.+|--+.||+|...+++.|||||.+......-..+- .+..-.+......+...++..|.+ .|.+|
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~----Yi~gd~Rf~~~~~~rr~lv~~W~~---------kEf~N 121 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRR----YIQGDPRFRNSRSNRRKLVFAWAR---------KEFRN 121 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHH----HHhcChhhhcCCCCHHHHHHHHHH---------HHHHH
Confidence 78899999999999888999999999876654322111 111111111123366666666664 49999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCc-----CCCChHHHhhcCCCHHHHHHHHHHHHH
Q 002927 92 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGI-----RLNDCESLEAFGVNKQKVVEEITRAYA 166 (864)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~-----~L~~~~~~~~~~~~~~~l~~~~~~~~l 166 (864)
+.++.+. +|.||+++..-+.||+||||... .|.|+.. ...+.+.+...+++.+-
T Consensus 122 L~R~~eA------------------GVrvP~Pi~~~~nVLvMEfIg~~g~pAP~LkDv~~---e~~e~~~~~~~~v~~~~ 180 (268)
T COG1718 122 LKRAYEA------------------GVRVPEPIAFRNNVLVMEFIGDDGLPAPRLKDVPL---ELEEAEGLYEDVVEYMR 180 (268)
T ss_pred HHHHHHc------------------CCCCCCceeecCCeEEEEeccCCCCCCCCcccCCc---CchhHHHHHHHHHHHHH
Confidence 9998763 68999999999999999999543 2333210 00024455566666655
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHHcCCC
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 238 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~G~~ 238 (864)
.++...|++|+||..-|||+. + +.+++||||.+..+....-.. ++.+|...+...|...|+.
T Consensus 181 ~l~~~a~LVHgDLSEyNiL~~-~--~~p~iID~~QaV~~~hp~a~e-------~L~RDv~Ni~~fF~r~gv~ 242 (268)
T COG1718 181 RLYKEAGLVHGDLSEYNILVH-D--GEPYIIDVSQAVTIDHPNAFE-------FLERDVRNIARFFRRKGVE 242 (268)
T ss_pred HHHHhcCcccccchhhheEEE-C--CeEEEEECccccccCCCchHH-------HHHHHHHHHHHHHHHcCCC
Confidence 555669999999999999998 3 799999999998887554433 4789999999999999985
|
|
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.4e-13 Score=149.36 Aligned_cols=138 Identities=14% Similarity=0.138 Sum_probs=92.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +++.||||+.+...... ..+.+ .+..|.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~~---------------------------------~~~~e~ 51 (324)
T cd05587 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQ-DDDVE---------------------------------CTMVEK 51 (324)
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHH---------------------------------HHHHHH
Confidence 67999999999999976 68899999876432100 00000 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+..+.+ .-.++.++ . ....++||||++|.+|.+.... ........+...+.+++
T Consensus 52 ~~l~~~~~-------------------~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~ 111 (324)
T cd05587 52 RVLALPGK-------------------PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-VGKFKEPHAVFYAAEIA 111 (324)
T ss_pred HHHHhcCC-------------------CCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 44433321 11233333 2 4567899999999999766432 22344444444444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+..+|..|++|||+||.|||++.+ +.++|+|||++..
T Consensus 112 ~al~~lH~~~ivH~dlkp~Nill~~~--~~~kL~Dfg~~~~ 150 (324)
T cd05587 112 IGLFFLHSKGIIYRDLKLDNVMLDAE--GHIKIADFGMCKE 150 (324)
T ss_pred HHHHHHHHCCeEecCCCHHHeEEcCC--CCEEEeecCccee
Confidence 788999999999999999999865 8999999998764
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.3e-13 Score=142.05 Aligned_cols=140 Identities=18% Similarity=0.220 Sum_probs=98.8
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|...+++.||+|+.+....... +.++.+|++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~------------------------------------~~~~~~e~~ 44 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQEL------------------------------------KIKFLSEAR 44 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHH------------------------------------HHHHHHHHH
Confidence 46899999999999988899999998765543221 112445666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
.+.++.+ ++ +.+...+. ....++||||++|.+|.++........+...+...+.++. +
T Consensus 45 ~l~~l~h------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l 106 (250)
T cd05085 45 ILKQYDH------------------PNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGM 106 (250)
T ss_pred HHHhCCC------------------CCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 5555422 11 11222222 4568899999999999887543333455566555555544 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+|..|++|+|+||+||+++.+ +.++|+|||++....
T Consensus 107 ~~lH~~~~~H~dl~p~nili~~~--~~~~l~d~g~~~~~~ 144 (250)
T cd05085 107 AYLESKNCIHRDLAARNCLVGEN--NVLKISDFGMSRQED 144 (250)
T ss_pred HHHHhCCeeecccChheEEEcCC--CeEEECCCccceecc
Confidence 78899999999999999999865 889999999886543
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.5e-13 Score=150.13 Aligned_cols=139 Identities=19% Similarity=0.184 Sum_probs=91.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.++..... +-. .+ .+..|.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~-------------------------~~------~~~~e~ 46 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQ---DDD-------------------------VE------CTMTEK 46 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh---ccH-------------------------HH------HHHHHH
Confidence 35899999999999986 78999999876432100 000 00 012233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+..... ++ .|++++ . ....+|||||++|.+|.+.... ....+...+...+.+++
T Consensus 47 ~~l~~~~~-----------------h~--~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~-~~~l~~~~~~~~~~ql~ 106 (320)
T cd05590 47 RILSLARN-----------------HP--FLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQK-SRRFDEARARFYAAEIT 106 (320)
T ss_pred HHHHhccC-----------------CC--chhceeeEEEcCCEEEEEEcCCCCchHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 33222210 11 222332 2 4557899999999999776432 23455555544444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..|++|||+||+|||++.+ +.++|+|||++...
T Consensus 107 ~~L~~lH~~~ivH~dlkp~NIli~~~--~~~kL~DfG~~~~~ 146 (320)
T cd05590 107 SALMFLHDKGIIYRDLKLDNVLLDHE--GHCKLADFGMCKEG 146 (320)
T ss_pred HHHHHHHHCCeEeCCCCHHHeEECCC--CcEEEeeCCCCeec
Confidence 788999999999999999999865 89999999998753
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.2e-13 Score=149.01 Aligned_cols=143 Identities=19% Similarity=0.137 Sum_probs=95.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+..-.. +.+ .. -.+.+|+
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~------------------------~~------~~~~~E~ 69 (329)
T PTZ00263 24 ETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREIL----KMK------------------------QV------QHVAQEK 69 (329)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh----hhh------------------------hH------HHHHHHH
Confidence 78999999999999986 7999999987632100 000 00 0134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+-..+. ....+++|||++|.+|.+.... ........+...+.+++ +
T Consensus 70 ~~l~~l~hp-----------------~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL 131 (329)
T PTZ00263 70 SILMELSHP-----------------FIVNMMCSFQDENRVYFLLEFVVGGELFTHLRK-AGRFPNDVAKFYHAELVLAF 131 (329)
T ss_pred HHHHhCCCC-----------------CCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHH-cCCCCHHHHHHHHHHHHHHH
Confidence 555554321 0112222222 5667899999999999876532 22334333333333333 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|||+||.|||++.+ +.++|+|||++..+..
T Consensus 132 ~~LH~~~ivH~dlkp~NIll~~~--~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 132 EYLHSKDIIYRDLKPENLLLDNK--GHVKVTDFGFAKKVPD 170 (329)
T ss_pred HHHHHCCeeecCCCHHHEEECCC--CCEEEeeccCceEcCC
Confidence 88999999999999999999865 8999999999987754
|
|
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.8e-13 Score=151.28 Aligned_cols=141 Identities=14% Similarity=0.138 Sum_probs=91.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.+..- .. . .+... .+.+|.
T Consensus 7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~-------~~--~-------------------~~~~~------~~~~E~ 52 (376)
T cd05598 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKAD-------VL--M-------------------RNQAA------HVKAER 52 (376)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEcHHH-------HH--h-------------------hhhHH------HHHHHH
Confidence 67999999999999976 79999999865311 00 0 00001 133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.+. .-+.+-..+. ....+|||||++|++|.++... ...+....+...+.+++ +
T Consensus 53 ~il~~l~h~-----------------~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~al 114 (376)
T cd05598 53 DILAEADNE-----------------WVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-LGIFEEDLARFYIAELTCAI 114 (376)
T ss_pred HHHHhCCCC-----------------CcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Confidence 444443221 0112222222 5667899999999999887532 22233333333333332 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+|..||+|||+||+|||++.+ +.++|+|||++..+
T Consensus 115 ~~lH~~~ivHrDlkp~Nill~~~--~~ikL~DFG~a~~~ 151 (376)
T cd05598 115 ESVHKMGFIHRDIKPDNILIDRD--GHIKLTDFGLCTGF 151 (376)
T ss_pred HHHHHCCeEeCCCCHHHEEECCC--CCEEEEeCCCCccc
Confidence 88999999999999999999865 89999999998655
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.1e-13 Score=141.17 Aligned_cols=138 Identities=17% Similarity=0.211 Sum_probs=95.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+++ +|+.||||+.+........ -++.+|.
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------------~~~~~e~ 44 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLK------------------------------------AKFLQEA 44 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHH------------------------------------HHHHHHH
Confidence 46899999999999986 8999999986543322111 1133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ + .+.+++ . ....+|||||++|.+|.++........+...+...+.+++
T Consensus 45 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~ 104 (252)
T cd05084 45 RILKQYSH------------------P--NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAA 104 (252)
T ss_pred HHHHhCCC------------------C--CcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 44444322 1 122333 2 4567899999999999887543333355555555554444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 105 ~~L~~lH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~~~ 145 (252)
T cd05084 105 AGMEYLESKHCIHRDLAARNCLVTEK--NVLKISDFGMSREEE 145 (252)
T ss_pred HHHHHHHhCCccccccchheEEEcCC--CcEEECccccCcccc
Confidence 678899999999999999999865 889999999987654
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.9e-13 Score=148.80 Aligned_cols=139 Identities=14% Similarity=0.115 Sum_probs=92.4
Q ss_pred ccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 12 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 12 plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
.||+|++|.||+|+.+ +|+.||+|+.+...... ..+ ...+..|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~---------------------------------~~~~~~E~~ 47 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIA-KDE---------------------------------VAHTVTESR 47 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hHH---------------------------------HHHHHHHHH
Confidence 5899999999999975 79999999876432100 000 001233555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~ 167 (864)
.+.++.+.+ -+.+-..+. ....+|||||++|.+|.+.... ........+...+.+++ +.
T Consensus 48 ~l~~l~hp~-----------------i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~ 109 (323)
T cd05595 48 VLQNTRHPF-----------------LTALKYAFQTHDRLCFVMEYANGGELFFHLSR-ERVFTEERARFYGAEIVSALE 109 (323)
T ss_pred HHHhCCCCC-----------------CcceeeEEecCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHH
Confidence 544443210 111222222 4567899999999998765432 22345555554444444 78
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
.+|..|++|||+||.|||++.+ +.++|+|||++..
T Consensus 110 ~LH~~~ivH~Dlkp~NIll~~~--~~~kL~Dfg~~~~ 144 (323)
T cd05595 110 YLHSRDVVYRDIKLENLMLDKD--GHIKITDFGLCKE 144 (323)
T ss_pred HHHHCCeEecCCCHHHEEEcCC--CCEEecccHHhcc
Confidence 8999999999999999999865 8999999998765
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.43 E-value=4e-13 Score=148.56 Aligned_cols=138 Identities=16% Similarity=0.153 Sum_probs=90.2
Q ss_pred ccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 12 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 12 plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
.||.|++|+||+|+.+ +|+.||||+.+...... ..+.+ .+..|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~---------------------------------~~~~e~~ 47 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQ-DDDVD---------------------------------CTMTEKR 47 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhh-hhHHH---------------------------------HHHHHHH
Confidence 5899999999999976 68999999876432100 00000 0122333
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.+.... .++ .|.+++ . ....+|||||++|.+|.+... .........+...+.+++
T Consensus 48 il~~~~-----------------~hp--~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~ 107 (321)
T cd05591 48 ILALAA-----------------KHP--FLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQ-RSRKFDEPRSRFYAAEVTL 107 (321)
T ss_pred HHHhcc-----------------CCC--CccceeeEEEcCCeEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHH
Confidence 322221 111 233333 2 456789999999999876643 222344444444444433
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|+.|++|||+||.||+++.+ +.++|+|||++...
T Consensus 108 aL~~LH~~~ivHrDikp~Nill~~~--~~~kL~Dfg~~~~~ 146 (321)
T cd05591 108 ALMFLHRHGVIYRDLKLDNILLDAE--GHCKLADFGMCKEG 146 (321)
T ss_pred HHHHHHHCCeeccCCCHHHeEECCC--CCEEEeecccceec
Confidence 788999999999999999999865 89999999988653
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.4e-13 Score=147.20 Aligned_cols=138 Identities=14% Similarity=0.113 Sum_probs=91.5
Q ss_pred ccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 12 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 12 plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
.||+|++|+||+|+.+ +|+.||||+.++..... ..+ ...+..|.+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~-~~~---------------------------------~~~~~~e~~ 47 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA-KDE---------------------------------VAHTLTENR 47 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhH---------------------------------HHHHHHHHH
Confidence 5899999999999975 89999999976422100 000 001233444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
.+..+.+ +.+ .+-..+. ....+|||||++|.+|.+... ....+....+...+.+++ +
T Consensus 48 ~l~~~~h------------------p~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~~aL 108 (325)
T cd05594 48 VLQNSRH------------------PFLTALKYSFQTHDRLCFVMEYANGGELFFHLS-RERVFSEDRARFYGAEIVSAL 108 (325)
T ss_pred HHHhCCC------------------CCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 4444322 111 1112222 456789999999999876543 222345555555444444 7
Q ss_pred HHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 167 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 167 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
..+|. .|++|||+||.|||++.+ +.++|+|||++..
T Consensus 109 ~~lH~~~~ivHrDikp~NIll~~~--~~~kL~Dfg~~~~ 145 (325)
T cd05594 109 DYLHSEKNVVYRDLKLENLMLDKD--GHIKITDFGLCKE 145 (325)
T ss_pred HHHHhcCCEEecCCCCCeEEECCC--CCEEEecCCCCee
Confidence 88897 799999999999999865 8999999999865
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.1e-13 Score=149.77 Aligned_cols=141 Identities=21% Similarity=0.290 Sum_probs=94.6
Q ss_pred cccccc-cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhh
Q 002927 5 FMDFVE-TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 82 (864)
Q Consensus 5 F~~fd~-~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 82 (864)
|.+++. +.||.|++|.||+|+.+ +|+.||||+.+........ .
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------~----- 117 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVR------------------------------R----- 117 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHH------------------------------H-----
Confidence 444543 68999999999999976 7999999997654322111 0
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHH---HHH
Q 002927 83 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQ---KVV 158 (864)
Q Consensus 83 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~---~l~ 158 (864)
.+.+|++.+.++.+. .-+.+-.++. ....+++|||++|.+|.+... .... .++
T Consensus 118 -~~~~E~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-----~~~~~~~~i~ 174 (353)
T PLN00034 118 -QICREIEILRDVNHP-----------------NVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHI-----ADEQFLADVA 174 (353)
T ss_pred -HHHHHHHHHHhCCCC-----------------CcceeeeEeccCCeEEEEEecCCCCccccccc-----CCHHHHHHHH
Confidence 133455555544321 0122222222 456789999999999876421 1222 233
Q ss_pred HHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 159 EEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 159 ~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..++.. +..+|..|++|+|+||.|||++.+ +.++|+|||++..+.
T Consensus 175 ~qi~~a-L~~LH~~~ivHrDlkp~NIll~~~--~~~kL~DfG~~~~~~ 219 (353)
T PLN00034 175 RQILSG-IAYLHRRHIVHRDIKPSNLLINSA--KNVKIADFGVSRILA 219 (353)
T ss_pred HHHHHH-HHHHHHCCEeecCCCHHHEEEcCC--CCEEEcccccceecc
Confidence 333333 778999999999999999999865 899999999987654
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.43 E-value=9.6e-14 Score=142.05 Aligned_cols=144 Identities=18% Similarity=0.195 Sum_probs=99.2
Q ss_pred cccccccceeeEEEEe-cCCCEEEEEEec-CChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATL-VDGRQVVVKVQH-QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l-~~G~~VAVKv~~-p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+-||.||||.||++.. .+|..||.|-.. -.+. ..-+..+..|++..+.
T Consensus 25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md------------------------------~k~rq~~v~Ei~lLkQ 74 (375)
T KOG0591|consen 25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMD------------------------------AKARQDCVKEISLLKQ 74 (375)
T ss_pred HHHcCCcchheEEeeeccCcchhhhhhcchhhcc------------------------------HHHHHHHHHHHHHHHh
Confidence 6799999999999995 499999999322 1111 1222334455665555
Q ss_pred HH--HHHHHHH-HhCCCCCCCCCCCCCCCCCCEEEeeEEecCC-ceEEEeecCCcCCCChHHHh---hcCCCHHHHHHHH
Q 002927 89 AE--NTRIVSA-NLGCKNKHEDSNKKPAYEVDVLIPEVIQSSE-TVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEI 161 (864)
Q Consensus 89 a~--n~~~~~~-~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~-~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l~~~~ 161 (864)
.+ |+.++.+ .|- ...+ ..||||+|++++|++..+-- +.-+..+.+.+.+
T Consensus 75 L~HpNIVqYy~~~f~------------------------~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f 130 (375)
T KOG0591|consen 75 LNHPNIVQYYAHSFI------------------------EDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYF 130 (375)
T ss_pred cCCchHHHHHHHhhh------------------------ccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHH
Confidence 54 4444433 221 1122 35899999999999876532 2234556677777
Q ss_pred HHHH--HHHHHh--cC--eeccCCCCCCeEEccCCCCceEEEecccccccChHHH
Q 002927 162 TRAY--AHQIYV--DG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 210 (864)
Q Consensus 162 ~~~~--l~~i~~--~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 210 (864)
++++ +..+|. .. ++|||+||+||+++.. |.++|.|||+++.++.+..
T Consensus 131 ~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~--gvvKLGDfGL~r~l~s~~t 183 (375)
T KOG0591|consen 131 VQLCRALYHCHSKIPRGTVMHRDIKPANIFLTAN--GVVKLGDFGLGRFLSSKTT 183 (375)
T ss_pred HHHHHHHHHHhccccccceeeccCcchheEEcCC--CceeeccchhHhHhcchhH
Confidence 7766 556665 44 9999999999999965 8999999999999886543
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.43 E-value=3e-13 Score=147.36 Aligned_cols=140 Identities=19% Similarity=0.176 Sum_probs=93.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+....-... .+ ..-.+.+|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~------------------------------~~~~~~~E~ 52 (291)
T cd05612 7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIR----LK------------------------------QEQHVHNEK 52 (291)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh----hH------------------------------HHHHHHHHH
Confidence 67999999999999976 79999999875321100 00 000123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++.+ ..|.+++. ....++||||++|.+|.++... ........+...+.+++
T Consensus 53 ~~l~~l~h--------------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~ 111 (291)
T cd05612 53 RVLKEVSH--------------------PFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRN-SGRFSNSTGLFYASEIV 111 (291)
T ss_pred HHHHhCCC--------------------CcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 33333321 11222222 3456899999999999877542 22344444444444433
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.||+++.+ |.++|+|||++..+..
T Consensus 112 ~~l~~lH~~~i~H~dlkp~NIli~~~--~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 112 CALEYLHSKEIVYRDLKPENILLDKE--GHIKLTDFGFAKKLRD 153 (291)
T ss_pred HHHHHHHHCCeeecCCCHHHeEECCC--CCEEEEecCcchhccC
Confidence 788999999999999999999865 8999999999876643
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.9e-13 Score=148.34 Aligned_cols=141 Identities=18% Similarity=0.244 Sum_probs=95.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+...... . +..+ .+..|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--~--------------------------~~~~------~~~~e~ 52 (330)
T cd05601 7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA--Q--------------------------ETVS------FFEEER 52 (330)
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhh--h--------------------------hHHH------HHHHHH
Confidence 67999999999999976 79999999876421100 0 0000 122343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+..+.+ ..+++++ . ....+|||||++|.+|.++.......+....+...+.+++
T Consensus 53 ~i~~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~ 112 (330)
T cd05601 53 DILSISNS--------------------PWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELV 112 (330)
T ss_pred HHHHhCCC--------------------CCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 33333211 1223332 2 4567899999999999887653323455554444444433
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||.||+++.+ +.++|+|||++..+..
T Consensus 113 ~aL~~lH~~~i~H~Dlkp~NIll~~~--~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 113 LAIHSVHQMGYVHRDIKPENVLIDRT--GHIKLADFGSAARLTA 154 (330)
T ss_pred HHHHHHHHCCeEcccCchHheEECCC--CCEEeccCCCCeECCC
Confidence 788999999999999999999865 8999999999987654
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.7e-13 Score=152.73 Aligned_cols=137 Identities=18% Similarity=0.309 Sum_probs=97.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++||-|.||.|..++-. +...+|.|.+|. .|+ +.+.-...+..|-|...||
T Consensus 635 k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrK-------aDV---------------------l~rnQvaHVKAERDILAEA 686 (1034)
T KOG0608|consen 635 KTIGVGAFGEVCLVRKVDTRALYAMKTLRK-------ADV---------------------LMRNQVAHVKAERDILAEA 686 (1034)
T ss_pred eeecccccceeEEEeecchhhHHHHhhhHH-------HHH---------------------HhhhhhhhhhhhhhhHhhc
Confidence 78999999999999854 445568885431 121 1111222345666777776
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR-- 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~-- 163 (864)
.| . .|-++|+ ....|.||+||+|+++-.+ +-+.|+=++.+++-.+.
T Consensus 687 Dn-------------------------~-WVVrLyySFQDkdnLYFVMdYIPGGDmMSL--LIrmgIFeE~LARFYIAEl 738 (1034)
T KOG0608|consen 687 DN-------------------------E-WVVRLYYSFQDKDNLYFVMDYIPGGDMMSL--LIRMGIFEEDLARFYIAEL 738 (1034)
T ss_pred CC-------------------------c-ceEEEEEEeccCCceEEEEeccCCccHHHH--HHHhccCHHHHHHHHHHHH
Confidence 43 1 2345554 4567899999999998776 34567767777765443
Q ss_pred -HHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 164 -AYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 164 -~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+.++.+|.-||||||+||.||||+.| |.|+|.|||++.-+
T Consensus 739 tcAiesVHkmGFIHRDiKPDNILIDrd--GHIKLTDFGLCTGf 779 (1034)
T KOG0608|consen 739 TCAIESVHKMGFIHRDIKPDNILIDRD--GHIKLTDFGLCTGF 779 (1034)
T ss_pred HHHHHHHHhccceecccCccceEEccC--Cceeeeeccccccc
Confidence 33888999999999999999999976 99999999998754
|
|
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.2e-13 Score=148.63 Aligned_cols=139 Identities=14% Similarity=0.126 Sum_probs=92.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+...... ..+. -.+..|.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~---------------------------------~~~~~e~ 51 (323)
T cd05615 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDDV---------------------------------ECTMVEK 51 (323)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH---------------------------------HHHHHHH
Confidence 67999999999999976 79999999876321100 0000 0122343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+..+.+ ++ .+++++ . ....+|||||++|.+|.+.... ...+....+...+.+++
T Consensus 52 ~~l~~~~~-----------------~~--~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~ 111 (323)
T cd05615 52 RVLALQDK-----------------PP--FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQ-VGKFKEPQAVFYAAEIS 111 (323)
T ss_pred HHHHhccC-----------------CC--chhheeeEEecCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 33332211 11 122222 2 3457899999999998776432 23345555555544444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..|++|||+||+||+++.+ +.++|+|||++...
T Consensus 112 ~al~~lH~~~ivHrDikp~Nill~~~--~~ikL~Dfg~~~~~ 151 (323)
T cd05615 112 VGLFFLHRRGIIYRDLKLDNVMLDSE--GHIKIADFGMCKEH 151 (323)
T ss_pred HHHHHHHHCCeeccCCCHHHeEECCC--CCEEEecccccccc
Confidence 788999999999999999999865 89999999988653
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.3e-13 Score=147.18 Aligned_cols=141 Identities=16% Similarity=0.105 Sum_probs=92.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+++.+ +++.||||+....-... .. ....+..|.
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~-~~---------------------------------~~~~~~~e~ 52 (331)
T cd05624 7 KVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLK-RA---------------------------------ETACFREER 52 (331)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHh-hH---------------------------------HHHHHHHHH
Confidence 67999999999999976 78999999865310000 00 000122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+..+. ++ .|..++ . ....+|||||++|++|.++.......+....+...+.+++
T Consensus 53 ~~l~~~~------------------~~--~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~ 112 (331)
T cd05624 53 NVLVNGD------------------CQ--WITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMV 112 (331)
T ss_pred HHHHhCC------------------CC--CEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 2222221 11 233333 2 4567899999999999987653233444444443333333
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++.+|..|++|||+||+|||++.+ +.++|+|||++..+..
T Consensus 113 ~~L~~lH~~~iiHrDlkp~Nill~~~--~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 113 LAIHSIHQLHYVHRDIKPDNVLLDMN--GHIRLADFGSCLKMNQ 154 (331)
T ss_pred HHHHHHHHCCeeeccCchHHEEEcCC--CCEEEEeccceeeccC
Confidence 788999999999999999999865 8999999999877654
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.9e-13 Score=149.90 Aligned_cols=138 Identities=15% Similarity=0.161 Sum_probs=91.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +++.||||+.+..-. .. .+... .+.+|.
T Consensus 7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~--~~--------------------------~~~~~------~~~~E~ 52 (382)
T cd05625 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDV--LL--------------------------RNQVA------HVKAER 52 (382)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHh--hh--------------------------HHHHH------HHHHHH
Confidence 67999999999999976 799999998653110 00 00000 133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ + .|.+++. ....+|||||++|++|.++... ........+...+.+++
T Consensus 53 ~il~~~~h------------------~--~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~ 111 (382)
T cd05625 53 DILAEADN------------------E--WVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-MGIFPEDLARFYIAELT 111 (382)
T ss_pred HHHHhCCC------------------C--cCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHH
Confidence 44444322 1 2333332 4567899999999999876432 22233333333333333
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..||+|||+||.|||++.+ |.++|+|||++..+
T Consensus 112 ~al~~lH~~~ivHrDlKp~NILl~~~--g~~kL~DFGla~~~ 151 (382)
T cd05625 112 CAVESVHKMGFIHRDIKPDNILIDRD--GHIKLTDFGLCTGF 151 (382)
T ss_pred HHHHHHHhCCeecCCCCHHHEEECCC--CCEEEeECCCCccc
Confidence 788999999999999999999865 89999999998654
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.6e-13 Score=150.12 Aligned_cols=152 Identities=17% Similarity=0.232 Sum_probs=103.0
Q ss_pred cccccccccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 3 GMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 3 ~~F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
.+|.-|.++.||||-||.||-|+.+ +|+.|||||...- + +. ...
T Consensus 562 tvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKl-------------------r-Fp---------------~kq 606 (888)
T KOG4236|consen 562 TVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKL-------------------R-FP---------------TKQ 606 (888)
T ss_pred HHHHhhhHhhccCCcceeeecceecccCceeeeeeeecc-------------------c-CC---------------Cch
Confidence 4667788899999999999999975 9999999985310 0 00 012
Q ss_pred hccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEecCC-ceEEEeecCCcCCCChHHHhhcCCCHHHHHH
Q 002927 82 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQSSE-TVLILEFMDGIRLNDCESLEAFGVNKQKVVE 159 (864)
Q Consensus 82 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~~~~-~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~ 159 (864)
|-.+++|..-++.+. ++.+ .+-..+++.+ .+.|||-+.|.-|+-++..++..+. +++-+
T Consensus 607 esqlR~EVaILq~l~------------------HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~-er~Tk 667 (888)
T KOG4236|consen 607 ESQLRNEVAILQNLH------------------HPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLP-ERITK 667 (888)
T ss_pred HHHHHHHHHHHHhcC------------------CCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccch-HHHHH
Confidence 223455655555543 2333 3334444444 4579999999888776654443332 33322
Q ss_pred H---HHHHHHHHHHhcCeeccCCCCCCeEEccCCC-CceEEEecccccccChH
Q 002927 160 E---ITRAYAHQIYVDGFFNGDPHPGNFLVSKDPP-HRPILLDFGLTKKLSSS 208 (864)
Q Consensus 160 ~---~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~-g~i~LiDFG~~~~l~~~ 208 (864)
- .+-..++.+|..+|+||||||+|||+....+ -+++|+|||.++.+.+.
T Consensus 668 FlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk 720 (888)
T KOG4236|consen 668 FLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK 720 (888)
T ss_pred HHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchh
Confidence 2 2223388889999999999999999975422 57999999999998764
|
|
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.6e-13 Score=147.06 Aligned_cols=141 Identities=16% Similarity=0.155 Sum_probs=93.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+..- ... . .... .+..|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~-~-------------------------~~~~------~~~~e~ 52 (331)
T cd05597 7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWE--MLK-R-------------------------AETA------CFREER 52 (331)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHH--Hhh-h-------------------------hhHH------HHHHHH
Confidence 67999999999999976 79999999875310 000 0 0000 122343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+..+.+ -.|+.++ . ....+|||||++|.+|.++.......+....+...+.+++
T Consensus 53 ~~l~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~ 112 (331)
T cd05597 53 DVLVNGDR--------------------RWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMV 112 (331)
T ss_pred HHHHhCCC--------------------CCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 33333211 1223332 2 4567899999999999887643223344444444444333
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 113 ~~l~~lH~~~ivH~dlkp~Nill~~~--~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 113 LAIDSVHQLGYVHRDIKPDNVLLDKN--GHIRLADFGSCLRLLA 154 (331)
T ss_pred HHHHHHHhCCeEECCCCHHHEEECCC--CCEEEEECCceeecCC
Confidence 788999999999999999999865 8999999999876543
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.6e-13 Score=149.41 Aligned_cols=140 Identities=18% Similarity=0.167 Sum_probs=92.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||+|+........ ..+ .-.+..|.
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~---------------------------------~~~~~~e~ 94 (370)
T cd05621 49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIK-RSD---------------------------------SAFFWEER 94 (370)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhh---------------------------------HHHHHHHH
Confidence 56999999999999986 78999999864210000 000 00122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+..+. ++. +.+-..+. ....++||||++|++|.++.. ....+...+...+.+++
T Consensus 95 ~i~~~~~------------------hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~--~~~~~~~~~~~~~~qil~a 154 (370)
T cd05621 95 DIMAFAN------------------SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMS--NYDVPEKWAKFYTAEVVLA 154 (370)
T ss_pred HHHHhCC------------------CCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHH--hcCCCHHHHHHHHHHHHHH
Confidence 3333322 111 22222222 456789999999999988753 33445444444333333
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|||+||+|||++.+ +.++|+|||++..+.
T Consensus 155 L~~LH~~~IvHrDLKp~NILl~~~--~~~kL~DFG~a~~~~ 193 (370)
T cd05621 155 LDAIHSMGLIHRDVKPDNMLLDKH--GHLKLADFGTCMKMD 193 (370)
T ss_pred HHHHHHCCeEecCCCHHHEEECCC--CCEEEEecccceecc
Confidence 788999999999999999999865 899999999988764
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.42 E-value=8.6e-13 Score=149.34 Aligned_cols=140 Identities=16% Similarity=0.179 Sum_probs=93.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+....- ....+ ... .+.+|.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~--~~~~~--------------------------~~~------~~~~E~ 52 (377)
T cd05629 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSE--MFKKD--------------------------QLA------HVKAER 52 (377)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHH--HHHhH--------------------------HHH------HHHHHH
Confidence 67999999999999976 89999999865310 00000 000 133444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ + .|++++. ....+|||||++|.+|.++... ...+....+...+.+++
T Consensus 53 ~il~~l~h------------------p--~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~ql~ 111 (377)
T cd05629 53 DVLAESDS------------------P--WVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIK-YDTFSEDVTRFYMAECV 111 (377)
T ss_pred HHHHhCCC------------------C--CcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHH
Confidence 44444322 1 2333332 4568899999999999876532 22344443333333333
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||.|||++.+ +.++|+|||+++.+..
T Consensus 112 ~aL~~LH~~givHrDlkp~NIll~~~--~~~kl~DfGla~~~~~ 153 (377)
T cd05629 112 LAIEAVHKLGFIHRDIKPDNILIDRG--GHIKLSDFGLSTGFHK 153 (377)
T ss_pred HHHHHHHhCCeeccCCCHHHEEECCC--CCEEEeeccccccccc
Confidence 788999999999999999999865 8999999999976543
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.42 E-value=6.5e-13 Score=149.45 Aligned_cols=140 Identities=16% Similarity=0.178 Sum_probs=95.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.. +|+.||||+.+..-. .. .+... .+.+|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~--------------------------~~~~~------~~~~E~ 52 (364)
T cd05599 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEM--LE--------------------------KEQVA------HVRAER 52 (364)
T ss_pred EEEEecCCEEEEEEEECCCCCEEEEEEEEHHHh--hh--------------------------hhHHH------HHHHHH
Confidence 67999999999999976 799999998753100 00 00001 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+..+.+ ..|++++ . ....+|||||++|.+|.++... ...+....+...+.+++
T Consensus 53 ~il~~l~h--------------------~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~ 111 (364)
T cd05599 53 DILAEADN--------------------PWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMK-KDTFTEEETRFYIAETI 111 (364)
T ss_pred HHHHhCCC--------------------CCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 44443321 1223333 2 4567899999999999887542 23345555544444444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||+|||++.+ |.++|+|||++..+..
T Consensus 112 ~aL~~lH~~~ivH~Dlkp~NIl~~~~--~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 112 LAIDSIHKLGYIHRDIKPDNLLLDAK--GHIKLSDFGLCTGLKK 153 (364)
T ss_pred HHHHHHHHCCeEeccCCHHHeEECCC--CCEEEeecccceeccc
Confidence 788999999999999999999865 8999999999887654
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.7e-13 Score=147.03 Aligned_cols=77 Identities=17% Similarity=0.198 Sum_probs=59.4
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....++||||++|.+|.+.... ....+...+...+.+++ +..+|..|++|||+||.||+++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~gg~L~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~--~~~kL~Dfg~a~ 144 (316)
T cd05592 68 KEHLFFVMEYLNGGDLMFHIQS-SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKD--GHIKIADFGMCK 144 (316)
T ss_pred CCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCC--CCEEEccCcCCe
Confidence 4557899999999999776532 23455555544444443 788999999999999999999865 899999999987
Q ss_pred cc
Q 002927 204 KL 205 (864)
Q Consensus 204 ~l 205 (864)
..
T Consensus 145 ~~ 146 (316)
T cd05592 145 EN 146 (316)
T ss_pred EC
Confidence 54
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.41 E-value=8.1e-13 Score=145.49 Aligned_cols=138 Identities=16% Similarity=0.106 Sum_probs=91.6
Q ss_pred cccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHHH
Q 002927 13 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 91 (864)
Q Consensus 13 lasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n 91 (864)
||+|++|.||+|+.. +|+.||||+.+...... ..+ ...+..|...
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~-~~~---------------------------------~~~~~~E~~~ 46 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVS-RSE---------------------------------VTHTLAERTV 46 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhH---------------------------------HHHHHHHHHH
Confidence 689999999999976 78999999875321000 000 0013345555
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCEE-EeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HH
Q 002927 92 TRIVSANLGCKNKHEDSNKKPAYEVDVL-IPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~-vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~ 167 (864)
+.++.+ +.+. +-..+. ....+|||||++|.+|.+.... ....+...+...+.+++ +.
T Consensus 47 l~~l~h------------------~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~ 107 (312)
T cd05585 47 LAQVNC------------------PFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQR-EGRFDLSRARFYTAELLCALE 107 (312)
T ss_pred HHhCCC------------------CcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHH
Confidence 544422 1211 112222 4567899999999999876542 23345554444444433 78
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
.+|..|++|||+||.|||++.+ +.++|+|||++...
T Consensus 108 ~lH~~~i~HrDlkp~Nili~~~--~~~kl~Dfg~~~~~ 143 (312)
T cd05585 108 NLHKFNVIYRDLKPENILLDYQ--GHIALCDFGLCKLN 143 (312)
T ss_pred HHHhCCeEeCCCCHHHeEECCC--CcEEEEECcccccC
Confidence 8999999999999999999865 89999999998753
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.1e-12 Score=143.49 Aligned_cols=139 Identities=19% Similarity=0.235 Sum_probs=93.8
Q ss_pred ccccccccceeeEEEEec-----------------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHH
Q 002927 10 ETPLATASIAQVHRATLV-----------------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPII 72 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-----------------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~ 72 (864)
.+.||+|++|.||+|+.. ++..||||+.++.......
T Consensus 10 ~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~-------------------------- 63 (304)
T cd05096 10 KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNAR-------------------------- 63 (304)
T ss_pred eeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHH--------------------------
Confidence 367999999999999853 2347999998876432211
Q ss_pred HHHHHHhHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHh
Q 002927 73 DEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE 148 (864)
Q Consensus 73 ~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~ 148 (864)
.+|.+|.+.+.++++ +. |.+++. ....+|+|||++|.+|.++....
T Consensus 64 ----------~~~~~E~~~l~~l~h------------------~n--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 113 (304)
T cd05096 64 ----------NDFLKEVKILSRLKD------------------PN--IIRLLGVCVDEDPLCMITEYMENGDLNQFLSSH 113 (304)
T ss_pred ----------HHHHHHHHHHhhcCC------------------CC--eeEEEEEEecCCceEEEEecCCCCcHHHHHHhc
Confidence 124456655555432 22 233332 45678999999999998875321
Q ss_pred hc------------------CCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 149 AF------------------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 149 ~~------------------~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.. .+....+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~--~~~kl~DfG~~~~~~ 189 (304)
T cd05096 114 HLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGEN--LTIKIADFGMSRNLY 189 (304)
T ss_pred cccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCC--ccEEECCCccceecc
Confidence 10 112223333333333 778999999999999999999865 899999999987654
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.41 E-value=6.4e-13 Score=147.56 Aligned_cols=140 Identities=19% Similarity=0.189 Sum_probs=92.6
Q ss_pred cccccccceeeEEEEec----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|++|.||+|+.. +|+.||||+.+...... +.. . .-.+.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~---~~~------------------------~------~~~~~ 52 (332)
T cd05614 6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQ---KAK------------------------T------VEHTR 52 (332)
T ss_pred EEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhh---hhh------------------------H------HHHHH
Confidence 67999999999999863 68999999875321100 000 0 00123
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
.|...+.++++ ++ .|.+++ . ....+|+|||++|.+|.+... ....+....+...+.
T Consensus 53 ~e~~~l~~l~~-----------------~~--~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~ 112 (332)
T cd05614 53 TERNVLEHVRQ-----------------SP--FLVTLHYAFQTEAKLHLILDYVSGGEMFTHLY-QRDNFSEDEVRFYSG 112 (332)
T ss_pred HHHHHHHhccC-----------------CC--CcccEEEEEecCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHH
Confidence 34444444321 11 122232 2 455789999999999877653 223455555544444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+++ +..+|..|++|||+||.|||++.+ +.++|+|||++..+
T Consensus 113 qi~~~l~~lH~~~ivHrDlkp~Nili~~~--~~~kl~DfG~~~~~ 155 (332)
T cd05614 113 EIILALEHLHKLGIVYRDIKLENILLDSE--GHVVLTDFGLSKEF 155 (332)
T ss_pred HHHHHHHHHHHCCcEecCCCHHHeEECCC--CCEEEeeCcCCccc
Confidence 443 788999999999999999999865 89999999998754
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.41 E-value=8.4e-13 Score=146.09 Aligned_cols=139 Identities=14% Similarity=0.122 Sum_probs=92.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +++.||||+.+...... ..+. ..+..|.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~---------------------------------~~~~~e~ 51 (323)
T cd05616 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDDV---------------------------------ECTMVEK 51 (323)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH---------------------------------HHHHHHH
Confidence 57999999999999976 78999999976432110 0000 0012233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+....+ + -.|+.++ . ....+|||||++|.+|.+.... ...++...+...+.+++
T Consensus 52 ~~l~~~~~-----------------~--~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~ 111 (323)
T cd05616 52 RVLALSGK-----------------P--PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQ-VGRFKEPHAVFYAAEIA 111 (323)
T ss_pred HHHHhccC-----------------C--CeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 33222211 1 1233333 2 3457899999999999766432 23345555555555444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..|++|||+||+|||++.+ +.++|+|||++...
T Consensus 112 ~aL~~LH~~~ivHrDlkp~Nill~~~--~~~kL~DfG~~~~~ 151 (323)
T cd05616 112 IGLFFLHSKGIIYRDLKLDNVMLDSE--GHIKIADFGMCKEN 151 (323)
T ss_pred HHHHHHHHCCEEecCCCHHHeEECCC--CcEEEccCCCceec
Confidence 788999999999999999999865 89999999998753
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.1e-13 Score=150.05 Aligned_cols=140 Identities=19% Similarity=0.196 Sum_probs=94.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|+||+|+.. +|+.||||+.+...... . +. .-.+..|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--~--------------------------~~------~~~~~~e~ 52 (350)
T cd05573 7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIK--R--------------------------NQ------IAHVRAER 52 (350)
T ss_pred EEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhh--c--------------------------cH------HHHHHHHH
Confidence 57999999999999976 79999999876321100 0 00 00123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+..+.+ ..|++++ . ....++||||++|.+|.++.... ..+....+...+.+++
T Consensus 53 ~~l~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~ 111 (350)
T cd05573 53 DILADADS--------------------PWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELV 111 (350)
T ss_pred HHHHhcCC--------------------CCccchhhheecCCeEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHH
Confidence 43333321 1122222 2 45678999999999998875422 3455554444444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 112 ~aL~~LH~~giiH~Dlkp~NIll~~~--~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 112 LALDSVHKLGFIHRDIKPDNILIDAD--GHIKLADFGLCKKMNK 153 (350)
T ss_pred HHHHHHHHCCeeccCCCHHHeEECCC--CCEEeecCCCCccCcc
Confidence 889999999999999999999865 8999999999887654
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.41 E-value=5.6e-13 Score=147.12 Aligned_cols=138 Identities=17% Similarity=0.171 Sum_probs=91.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||+.++..... ..+.. .+..|.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~---------------------------------~~~~e~ 46 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLI-DDDVE---------------------------------CTMVEK 46 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-cchHH---------------------------------HHHHHH
Confidence 35899999999999987 79999999876532110 00000 012233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.... ++ ..+++++. ....+|||||++|.+|.+.... ....+...+...+.+++
T Consensus 47 ~~l~~~~-----------------~~--~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~ 106 (316)
T cd05620 47 RVLALAW-----------------EN--PFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQD-KGRFDLYRATFYAAEIV 106 (316)
T ss_pred HHHHhcc-----------------CC--CCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 3322211 11 12333332 4567899999999998766432 23345555444444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+..+|..|++|||+||+||+++.+ +.++|+|||++..
T Consensus 107 ~~l~~lH~~~ivHrDlkp~Nil~~~~--~~~kl~Dfg~~~~ 145 (316)
T cd05620 107 CGLQFLHSKGIIYRDLKLDNVMLDRD--GHIKIADFGMCKE 145 (316)
T ss_pred HHHHHHHHCCeEecCCCHHHeEECCC--CCEEeCccCCCee
Confidence 788999999999999999999865 8999999998764
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.41 E-value=8.8e-13 Score=146.75 Aligned_cols=50 Identities=16% Similarity=0.223 Sum_probs=39.6
Q ss_pred HHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 155 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 155 ~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+...+.++. +..+|..|++|||+||.||+++.+ +.++|+|||+++.+.
T Consensus 174 ~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~--~~~kl~DfG~a~~~~ 225 (338)
T cd05102 174 EDLICYSFQVARGMEFLASRKCIHRDLAARNILLSEN--NVVKICDFGLARDIY 225 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCC--CcEEEeecccccccc
Confidence 33344334433 788999999999999999999865 899999999988654
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.5e-13 Score=144.50 Aligned_cols=139 Identities=20% Similarity=0.183 Sum_probs=88.0
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+-+|+||||.||+|.+. ++++||||-..++-+-. .+ |
T Consensus 29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-nr----------------------------------------E 67 (364)
T KOG0658|consen 29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-NR----------------------------------------E 67 (364)
T ss_pred eEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-cH----------------------------------------H
Confidence 467999999999999986 68999999655443210 11 2
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE-e---cCCc---eEEEeecCCcCCCChHHH---hhcCCCH---H
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI-Q---SSET---VLILEFMDGIRLNDCESL---EAFGVNK---Q 155 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~-~---~~~~---vLvmE~i~G~~L~~~~~~---~~~~~~~---~ 155 (864)
..-+.++ +++++.--..+ . .++. -|||||++ .+|.+..+. .....+. +
T Consensus 68 l~im~~l------------------~HpNIV~L~~~f~~~~~~d~~~lnlVleymP-~tL~~~~r~~~~~~~~mp~~~iK 128 (364)
T KOG0658|consen 68 LQIMRKL------------------DHPNIVRLLYFFSSSTESDEVYLNLVLEYMP-ETLYRVIRHYTRANQRMPLLEIK 128 (364)
T ss_pred HHHHHhc------------------CCcCeeeEEEEEEecCCCchhHHHHHHHhch-HHHHHHHHHHhhcCCCCceeeeH
Confidence 2222221 23333222221 1 2212 38999997 455554331 0112222 2
Q ss_pred HHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHH
Q 002927 156 KVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 210 (864)
Q Consensus 156 ~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 210 (864)
-...++.+. +..||..||.|||+||.||||+.+ .|.++|+|||.++.+.+.+.
T Consensus 129 LYt~Qlfrg-l~yLh~~~IcHRDIKPqNlLvD~~-tg~LKicDFGSAK~L~~~ep 181 (364)
T KOG0658|consen 129 LYTYQLFRG-LAYLHSHGICHRDIKPQNLLVDPD-TGVLKICDFGSAKVLVKGEP 181 (364)
T ss_pred HHHHHHHHH-HHHHHhcCcccCCCChheEEEcCC-CCeEEeccCCcceeeccCCC
Confidence 223333333 778899999999999999999976 69999999999999876553
|
|
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.41 E-value=9.9e-13 Score=145.89 Aligned_cols=138 Identities=17% Similarity=0.167 Sum_probs=92.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +++.||||+.+...... ..+. + .+..|.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~---------------------------~------~~~~e~ 46 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD-DEDI---------------------------D------WVQTEK 46 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH---------------------------H------HHHHHH
Confidence 35899999999999976 78999999976432110 0000 0 023344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++.+ ++ .|+.++. ....+|||||++|.+|.+.... ...+....+...+.+++
T Consensus 47 ~~~~~~~~-----------------~~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~qi~ 106 (327)
T cd05617 47 HVFEQASS-----------------NP--FLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQR-QRKLPEEHARFYAAEIC 106 (327)
T ss_pred HHHHhhcC-----------------CC--CEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 43333321 11 2333332 4567899999999998765432 23355554444444433
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+..+|..|++|||+||+|||++.+ +.++|+|||++..
T Consensus 107 ~al~~lH~~~ivHrDlkp~Nili~~~--~~~kl~Dfg~~~~ 145 (327)
T cd05617 107 IALNFLHERGIIYRDLKLDNVLLDAD--GHIKLTDYGMCKE 145 (327)
T ss_pred HHHHHHHHCCeeccCCCHHHEEEeCC--CCEEEecccccee
Confidence 788999999999999999999865 8999999998864
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.2e-12 Score=145.09 Aligned_cols=76 Identities=18% Similarity=0.218 Sum_probs=58.3
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+|||||++|.+|.+... .........+...+.+++ +..+|..|++|||+||+|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~--~~~kL~DfG~~~ 144 (325)
T cd05604 68 TEKLYFVLDFVNGGELFFHLQ-RERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQ--GHVVLTDFGLCK 144 (325)
T ss_pred CCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCC--CCEEEeecCCcc
Confidence 466889999999999876543 223344444444444433 788999999999999999999865 899999999986
Q ss_pred c
Q 002927 204 K 204 (864)
Q Consensus 204 ~ 204 (864)
.
T Consensus 145 ~ 145 (325)
T cd05604 145 E 145 (325)
T ss_pred c
Confidence 4
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.40 E-value=7.8e-13 Score=146.84 Aligned_cols=140 Identities=19% Similarity=0.148 Sum_probs=92.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||+.+....... .+. . .+..|.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~-~~~---------------------------~------~~~~e~ 46 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDD-EDI---------------------------D------WVQTEK 46 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh-hHH---------------------------H------HHHHHH
Confidence 35899999999999976 799999999764321100 000 0 022233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+.++.+ ++. +.+-..+. ....+|||||++|.+|.+... ....+....+...+.+++
T Consensus 47 ~il~~~~~-----------------hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~-~~~~l~~~~~~~~~~qi~~~ 108 (329)
T cd05588 47 HVFETASN-----------------HPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQ-RQRKLPEEHARFYSAEISLA 108 (329)
T ss_pred HHHHhccC-----------------CCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 33333211 111 12222222 456789999999999876543 223455555555444444
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+..+|..|++|||+||.||+++.+ +.++|+|||+++.
T Consensus 109 l~~lH~~~ivH~dlkp~Nili~~~--~~~kL~Dfg~~~~ 145 (329)
T cd05588 109 LNFLHERGIIYRDLKLDNVLLDAE--GHIKLTDYGMCKE 145 (329)
T ss_pred HHHHHHCCeEecCCCHHHeEECCC--CCEEECcCccccc
Confidence 788999999999999999999865 8999999998864
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.40 E-value=8.3e-13 Score=146.65 Aligned_cols=140 Identities=18% Similarity=0.149 Sum_probs=90.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+....... .+. . .+..|.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~~---------------------------~------~~~~E~ 46 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDD-EDI---------------------------D------WVQTEK 46 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcch-hHH---------------------------H------HHHHHH
Confidence 46899999999999976 789999998764321100 000 0 022233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+.++.+ ++. +.+-..+. .+..+|||||++|.+|.+... ....+....+...+.+++
T Consensus 47 ~~l~~~~~-----------------hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~-~~~~l~~~~~~~i~~qi~~~ 108 (329)
T cd05618 47 HVFEQASN-----------------HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISLA 108 (329)
T ss_pred HHHHhcCC-----------------CCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 33222211 111 11112222 566789999999999876543 223455544444444433
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+..+|..|++|||+||.||+++.+ +.++|+|||++..
T Consensus 109 l~~lH~~~ivH~Dikp~Nili~~~--~~~kL~DfG~~~~ 145 (329)
T cd05618 109 LNYLHERGIIYRDLKLDNVLLDSE--GHIKLTDYGMCKE 145 (329)
T ss_pred HHHHHHCCeeeCCCCHHHEEECCC--CCEEEeeCCcccc
Confidence 788999999999999999999865 8999999999865
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.2e-12 Score=141.60 Aligned_cols=142 Identities=16% Similarity=0.151 Sum_probs=93.1
Q ss_pred cccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHHH
Q 002927 13 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 91 (864)
Q Consensus 13 lasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n 91 (864)
||+|++|.||+++.+ +|+.||||+......... .. .-.+..|.+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~-~~---------------------------------~~~~~~E~~i 46 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKR-KG---------------------------------YEGAMVEKRI 46 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhh-HH---------------------------------HHHHHHHHHH
Confidence 689999999999976 899999997653211000 00 0013345555
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHH---hhcCCCHHHHHHHHHHHH--
Q 002927 92 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~---~~~~~~~~~l~~~~~~~~-- 165 (864)
+.++.+. .-+.+...+. ....+|||||++|.+|.+.... .....+...+...+.+++
T Consensus 47 l~~l~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~ 109 (280)
T cd05608 47 LAKVHSR-----------------FIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISG 109 (280)
T ss_pred HHhCCCC-----------------cEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHH
Confidence 5554221 0122222222 4567899999999999765421 112345555555444444
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|+.|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 110 l~~lH~~~i~H~dlkp~Nili~~~--~~~~l~dfg~~~~~~~ 149 (280)
T cd05608 110 LEHLHQRRIIYRDLKPENVLLDND--GNVRISDLGLAVELKD 149 (280)
T ss_pred HHHHHHCCcccCCCCHHHEEECCC--CCEEEeeCccceecCC
Confidence 788999999999999999999865 8999999999876643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.3e-12 Score=144.70 Aligned_cols=77 Identities=17% Similarity=0.169 Sum_probs=57.7
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....++||||++|.+|.+.... ........+...+.+++ +..+|..|++|||+||+|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~--~~~kl~DfG~a~ 144 (325)
T cd05602 68 ADKLYFVLDYINGGELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ--GHIVLTDFGLCK 144 (325)
T ss_pred CCeEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC--CCEEEccCCCCc
Confidence 4567899999999999876542 22333343333333333 788999999999999999999865 899999999986
Q ss_pred cc
Q 002927 204 KL 205 (864)
Q Consensus 204 ~l 205 (864)
..
T Consensus 145 ~~ 146 (325)
T cd05602 145 EN 146 (325)
T ss_pred cc
Confidence 53
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.6e-13 Score=142.26 Aligned_cols=159 Identities=18% Similarity=0.223 Sum_probs=94.3
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+|||.|++|.|..|+.+ +|+.||||-. .+.+..-+ ..++..+ |
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi----~~~F~~~~-------------------------~akRtlR------E 71 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKI----LNPFENQI-------------------------DAKRTLR------E 71 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhh----hhhhhchH-------------------------HHHHHHH------H
Confidence 489999999999999986 8999999932 11111111 1112222 4
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
.+-+++|+|.-- ....++..|.... -..-++|+|+++ -+|.++.+... .+....+--.+-+++
T Consensus 72 lklLr~~~HeNI------------i~l~di~~p~~~~~f~DvYiV~elMe-tDL~~iik~~~-~L~d~H~q~f~YQiLrg 137 (359)
T KOG0660|consen 72 LKLLRHLRHENI------------IGLLDIFRPPSRDKFNDVYLVFELME-TDLHQIIKSQQ-DLTDDHAQYFLYQILRG 137 (359)
T ss_pred HHHHHHhcCCCc------------ceEEeecccccccccceeEEehhHHh-hHHHHHHHcCc-cccHHHHHHHHHHHHHh
Confidence 444444443100 0011233332222 456789999995 34444332111 022222211222222
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC-----hHHHHHHHHHHHH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS-----SSMKQALAKMFFA 219 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~-----~~~r~~~~~l~~a 219 (864)
++.+|+.|++|||+||+|++++.+ +.++++|||+++.++ +.+.+.++.-||.
T Consensus 138 LKyiHSAnViHRDLKPsNll~n~~--c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYR 194 (359)
T KOG0660|consen 138 LKYIHSANVIHRDLKPSNLLLNAD--CDLKICDFGLARYLDKFFEDGFMTEYVATRWYR 194 (359)
T ss_pred cchhhcccccccccchhheeeccC--CCEEeccccceeeccccCcccchhcceeeeeec
Confidence 667789999999999999999976 899999999999994 4446666666654
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.39 E-value=8.7e-13 Score=144.45 Aligned_cols=139 Identities=21% Similarity=0.225 Sum_probs=92.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||+.+...... .+..+.+|+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~------------------------------------~~~~~~~E~ 54 (303)
T cd07869 11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG------------------------------------TPFTAIREA 54 (303)
T ss_pred eeEEecCCEEEEEEEECCCCCEEEEEEeccccccc------------------------------------cchhHHHHH
Confidence 68999999999999986 79999999875321100 001133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. ..+.+..++. ....++||||++| ++.+.............+...+.+++ +
T Consensus 55 ~~l~~l~h~-----------------niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al 116 (303)
T cd07869 55 SLLKGLKHA-----------------NIVLLHDIIHTKETLTLVFEYVHT-DLCQYMDKHPGGLHPENVKLFLFQLLRGL 116 (303)
T ss_pred HHHhhCCCC-----------------CcCeEEEEEecCCeEEEEEECCCc-CHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 554444221 1122333333 5567899999976 34333222223455555555544444 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+|..|++|+|+||+|||++.+ +.++|+|||++...
T Consensus 117 ~~lH~~~ivH~dlkp~Nill~~~--~~~kl~Dfg~~~~~ 153 (303)
T cd07869 117 SYIHQRYILHRDLKPQNLLISDT--GELKLADFGLARAK 153 (303)
T ss_pred HHHHHCCeecCCCCHHHEEECCC--CCEEECCCCcceec
Confidence 88999999999999999999865 89999999998654
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.2e-12 Score=144.90 Aligned_cols=141 Identities=20% Similarity=0.189 Sum_probs=91.8
Q ss_pred cccccccceeeEEEEec----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|++|.||+|+.. +|+.||||+.+..... .+.. ....+.
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~---~~~~------------------------------~~~~~~ 48 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIV---RNQK------------------------------DTAHTK 48 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHH---hhhh------------------------------hHHHHH
Confidence 56999999999999853 5889999987632110 0000 011134
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
.|...++++.+ +. +.+-..+. ....++||||++|.+|.+.... ........+...+.++
T Consensus 49 ~E~~il~~l~h------------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi 109 (323)
T cd05584 49 AERNILEAVKH------------------PFIVDLIYAFQTGGKLYLILEYLSGGELFMHLER-EGIFMEDTACFYLSEI 109 (323)
T ss_pred HHHHHHHhCCC------------------CchhceeeEEecCCeEEEEEeCCCCchHHHHHHH-cCCCCHHHHHHHHHHH
Confidence 45555555432 11 11222222 4567899999999999776432 2223333433333333
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+ +..+|..|++|+|+||.|||++.+ +.++|+|||+++..
T Consensus 110 ~~~l~~lH~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~~~~~ 150 (323)
T cd05584 110 SLALEHLHQQGIIYRDLKPENILLDAQ--GHVKLTDFGLCKES 150 (323)
T ss_pred HHHHHHHHHCCeecCCCCHHHeEECCC--CCEEEeeCcCCeec
Confidence 3 788999999999999999999865 89999999998643
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.5e-12 Score=144.03 Aligned_cols=76 Identities=17% Similarity=0.197 Sum_probs=57.3
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+|||||++|.+|.+... .........+...+.+++ +..+|..|++|||+||.||+++.+ |.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~~~ 144 (321)
T cd05603 68 AEKLYFVLDYVNGGELFFHLQ-RERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQ--GHVVLTDFGLCK 144 (321)
T ss_pred CCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC--CCEEEccCCCCc
Confidence 456789999999999876543 222344444444333333 788999999999999999999865 899999999886
Q ss_pred c
Q 002927 204 K 204 (864)
Q Consensus 204 ~ 204 (864)
.
T Consensus 145 ~ 145 (321)
T cd05603 145 E 145 (321)
T ss_pred c
Confidence 5
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.4e-12 Score=144.23 Aligned_cols=77 Identities=17% Similarity=0.179 Sum_probs=58.4
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+|||||++|.+|.+.... ........+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~--~~~kl~Dfg~~~ 144 (323)
T cd05575 68 ADKLYFVLDYVNGGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQ--GHVVLTDFGLCK 144 (323)
T ss_pred CCEEEEEEcCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCC--CcEEEeccCCCc
Confidence 4567899999999999776432 22344444444333433 788999999999999999999865 899999999886
Q ss_pred cc
Q 002927 204 KL 205 (864)
Q Consensus 204 ~l 205 (864)
..
T Consensus 145 ~~ 146 (323)
T cd05575 145 EG 146 (323)
T ss_pred cc
Confidence 53
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.5e-12 Score=146.98 Aligned_cols=141 Identities=18% Similarity=0.174 Sum_probs=93.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +++.||+|+....-.. -..+. -.+..|.
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~-~~~~~---------------------------------~~~~~e~ 94 (371)
T cd05622 49 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI-KRSDS---------------------------------AFFWEER 94 (371)
T ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhh-hhHHH---------------------------------HHHHHHH
Confidence 67999999999999987 7899999986521000 00000 0122343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+..+++ +. +.+-..+. ....++||||++|++|.++.. ........+...+.+++
T Consensus 95 ~i~~~~~h------------------p~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~--~~~~~~~~~~~~~~qi~~a 154 (371)
T cd05622 95 DIMAFANS------------------PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS--NYDVPEKWARFYTAEVVLA 154 (371)
T ss_pred HHHHhCCC------------------CCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHH--hcCCCHHHHHHHHHHHHHH
Confidence 33333221 11 12222222 455789999999999988753 33445444443333333
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||.|||++.+ +.++|+|||++..+..
T Consensus 155 L~~LH~~~ivHrDLkp~NIll~~~--~~ikL~DfG~a~~~~~ 194 (371)
T cd05622 155 LDAIHSMGFIHRDVKPDNMLLDKS--GHLKLADFGTCMKMNK 194 (371)
T ss_pred HHHHHHCCEEeCCCCHHHEEECCC--CCEEEEeCCceeEcCc
Confidence 788999999999999999999865 8999999999887653
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.7e-12 Score=127.89 Aligned_cols=128 Identities=23% Similarity=0.371 Sum_probs=93.3
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+|++.|..++||+++. .|+.|+||+.+++.. ...++..|++
T Consensus 4 ~~l~~G~~~~vy~~~~-~~~~~~lK~~~~~~~--------------------------------------~~~~~~~E~~ 44 (170)
T cd05151 4 SPLKGGMTNKNYRVEV-ANKKYVVRIPGNGTE--------------------------------------LLINRENEAE 44 (170)
T ss_pred eecCCcccCceEEEEE-CCeEEEEEeCCCCcc--------------------------------------cccCHHHHHH
Confidence 7899999999999996 588999998665431 1234567888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQ 168 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~ 168 (864)
.++.+.+. ..+|+++. .+..++||||++|.++.+... .+ ......+++. +..
T Consensus 45 ~l~~l~~~-------------------~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~~-----~~-~~~~~~l~~~-l~~ 98 (170)
T cd05151 45 NSKLAAEA-------------------GIGPKLYYFDPETGVLITEFIEGSELLTEDF-----SD-PENLEKIAKL-LKK 98 (170)
T ss_pred HHHHHHHh-------------------CCCCceEEEeCCCCeEEEEecCCCccccccc-----cC-HHHHHHHHHH-HHH
Confidence 88887652 13677776 455899999999999876411 11 2233444433 567
Q ss_pred HHhcC-----eeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 169 IYVDG-----FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 169 i~~~G-----~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+|..+ ++|+|+||+||+++ + +++++||||.+..-+
T Consensus 99 LH~~~~~~~~~~HgD~~~~Nil~~-~--~~~~liDf~~a~~~~ 138 (170)
T cd05151 99 LHSSPLPDLVPCHNDLLPGNFLLD-D--GRLWLIDWEYAGMND 138 (170)
T ss_pred HhCCCCCCceeecCCCCcCcEEEE-C--CeEEEEecccccCCC
Confidence 78777 59999999999998 3 689999999988643
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.7e-12 Score=144.86 Aligned_cols=142 Identities=19% Similarity=0.276 Sum_probs=104.1
Q ss_pred ccccccccccccccceeeEEEEec-CCCEEEEEEec---CChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHh
Q 002927 4 MFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQH---QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 79 (864)
Q Consensus 4 ~F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~---p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~ 79 (864)
.|..| +-||.|+-|-||.|+.. +++.||||... -.-++.+-
T Consensus 274 ~y~~~--~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLil--------------------------------- 318 (550)
T KOG0578|consen 274 KYTDF--KKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLL--------------------------------- 318 (550)
T ss_pred hhcch--hhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhH---------------------------------
Confidence 44555 44999999999999964 89999999632 11122222
Q ss_pred HhhccHHHHH--HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHH
Q 002927 80 PKELDFNSEA--ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKV 157 (864)
Q Consensus 80 ~~Eld~~~Ea--~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l 157 (864)
.|+..+++. .|+.+|-+.|-. ..+.+.||||++|++|.|+.. ....+..++
T Consensus 319 -nEi~Vm~~~~H~NiVnfl~Sylv------------------------~deLWVVMEym~ggsLTDvVt--~~~~~E~qI 371 (550)
T KOG0578|consen 319 -NEILVMRDLHHPNIVNFLDSYLV------------------------GDELWVVMEYMEGGSLTDVVT--KTRMTEGQI 371 (550)
T ss_pred -HHHHHHHhccchHHHHHHHHhcc------------------------cceeEEEEeecCCCchhhhhh--cccccHHHH
Confidence 222222222 366666554320 355678999999999999854 444677777
Q ss_pred HHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 158 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 158 ~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
+..+-+.+ |+.+|..||+|||+|-.|||+..+ |.++|.|||++.+++++.
T Consensus 372 A~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~--g~vKltDFGFcaqi~~~~ 423 (550)
T KOG0578|consen 372 AAICREILQGLKFLHARGIIHRDIKSDNILLTMD--GSVKLTDFGFCAQISEEQ 423 (550)
T ss_pred HHHHHHHHHHHHHHHhcceeeeccccceeEeccC--CcEEEeeeeeeecccccc
Confidence 77766655 889999999999999999999976 899999999999999876
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.7e-13 Score=148.55 Aligned_cols=144 Identities=15% Similarity=0.201 Sum_probs=101.0
Q ss_pred ccccc-ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 5 FMDFV-ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 5 F~~fd-~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
++++. -++||+||||.||||+++ | +||||++.-..... +-.+
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~wh-G-dVAVK~Lnv~~pt~-----------------------------~qlq------ 433 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWH-G-DVAVKLLNVDDPTP-----------------------------EQLQ------ 433 (678)
T ss_pred HHHhhccceeccccccceeecccc-c-ceEEEEEecCCCCH-----------------------------HHHH------
Confidence 34443 378999999999999986 3 69999875322111 0000
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHH
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 161 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~ 161 (864)
.|.+|..++++-||.. |.+ =.-+ .-...+|..||+|-+|.......+..++..++....
T Consensus 434 aFKnEVa~lkkTRH~N------------------IlL-FMG~~~~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIA 494 (678)
T KOG0193|consen 434 AFKNEVAVLKKTRHEN------------------ILL-FMGACMNPPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIA 494 (678)
T ss_pred HHHHHHHHHhhcchhh------------------hee-eehhhcCCceeeeehhccCchhhhhccchhhhhhHHHHHHHH
Confidence 1777888888877631 110 0112 233579999999999998877666666655544444
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
-++. +.++|..+|||+|||.-||++.++ ++++|.|||++..-+
T Consensus 495 qQiaqGM~YLHAK~IIHrDLKSnNIFl~~~--~kVkIgDFGLatvk~ 539 (678)
T KOG0193|consen 495 QQIAQGMDYLHAKNIIHRDLKSNNIFLHED--LKVKIGDFGLATVKT 539 (678)
T ss_pred HHHHHhhhhhhhhhhhhhhccccceEEccC--CcEEEecccceeeee
Confidence 4433 778999999999999999999865 899999999987543
|
|
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.6e-12 Score=146.74 Aligned_cols=142 Identities=17% Similarity=0.170 Sum_probs=93.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||+....-... .. ..-.+..|.
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~---------------------------------~~~~~~~e~ 94 (370)
T cd05596 49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIK-RS---------------------------------DSAFFWEER 94 (370)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hh---------------------------------hHHHHHHHH
Confidence 67999999999999976 79999999875210000 00 000123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+..+.+. .-+.+...+. ....+|||||++|++|.++.. ........+...+.+++ +
T Consensus 95 ~il~~~~h~-----------------~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~--~~~l~~~~~~~~~~qi~~aL 155 (370)
T cd05596 95 DIMAHANSE-----------------WIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMS--NYDIPEKWARFYTAEVVLAL 155 (370)
T ss_pred HHHHhCCCC-----------------CcceEEEEEecCCEEEEEEcCCCCCcHHHHHH--hcCCCHHHHHHHHHHHHHHH
Confidence 444333211 0122222222 455789999999999987743 33344444444333333 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|||+||.|||++.+ +.++|+|||++..+..
T Consensus 156 ~~LH~~~ivHrDLkp~NILl~~~--~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 156 DAIHSMGFIHRDVKPDNMLLDKS--GHLKLADFGTCMKMDA 194 (370)
T ss_pred HHHHHCCeeccCCCHHHEEEcCC--CCEEEEeccceeeccC
Confidence 88999999999999999999865 8999999999876643
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.3e-12 Score=139.34 Aligned_cols=79 Identities=25% Similarity=0.280 Sum_probs=60.2
Q ss_pred CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 128 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 128 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
...+.|||++|++|.+........+....+.....+.+ +.+||++||+|||+||.|||++.. ++.++|.|||+++.+
T Consensus 90 ~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~-~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 90 EYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPS-NGDVKLADFGLAKKL 168 (313)
T ss_pred eeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCC-CCeEEeccCcccccc
Confidence 46799999999999998653222244444433333333 888999999999999999999862 489999999999887
Q ss_pred Ch
Q 002927 206 SS 207 (864)
Q Consensus 206 ~~ 207 (864)
..
T Consensus 169 ~~ 170 (313)
T KOG0198|consen 169 ES 170 (313)
T ss_pred cc
Confidence 63
|
|
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.4e-12 Score=137.49 Aligned_cols=139 Identities=22% Similarity=0.257 Sum_probs=96.9
Q ss_pred cccccceeeEEEEec---CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 13 LATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 13 lasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
||.|++|.||+|+++ ++..||||+..+........ +|.+|+
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~------------------------------------~~~~E~ 46 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRD------------------------------------EMMREA 46 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHH------------------------------------HHHHHH
Confidence 899999999999864 45679999876543221110 144466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~ 167 (864)
..+.++.+. .-+.+..+......++||||++|.+|.+.........+...+.+.+.++. +.
T Consensus 47 ~~l~~l~h~-----------------~ii~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~ 109 (257)
T cd05115 47 EIMHQLDNP-----------------YIVRMIGVCEAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMK 109 (257)
T ss_pred HHHHhcCCC-----------------CeEEEEEEEcCCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Confidence 555554321 11222222234567899999999999887653344556666666555554 77
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 110 ~lH~~~i~H~dlkp~nil~~~~--~~~kl~dfg~~~~~~ 146 (257)
T cd05115 110 YLEGKNFVHRDLAARNVLLVNQ--HYAKISDFGLSKALG 146 (257)
T ss_pred HHHhcCeeecccchheEEEcCC--CcEEeccCCcccccc
Confidence 8899999999999999999865 889999999987654
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.3e-12 Score=144.62 Aligned_cols=142 Identities=15% Similarity=0.116 Sum_probs=92.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.++..... ..+.+ .+..|.
T Consensus 5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~---------------------------------~l~~e~ 50 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIA-RDEVE---------------------------------SLMCEK 50 (324)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHH---------------------------------HHHHHH
Confidence 56999999999999976 79999999976432100 00000 122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+-+..++. + .++. +.+...+. ....+|||||++|.+|.... ....++...+...+.+++
T Consensus 51 ~~~~~~~~-l--------------~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~--~~~~l~~~~~~~~~~qi~~a 113 (324)
T cd05589 51 RIFETANS-E--------------RHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHI--HTDVFSEPRAVFYAACVVLG 113 (324)
T ss_pred HHHHhccc-c--------------CCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHh--hcCCCCHHHHHHHHHHHHHH
Confidence 33322221 1 1111 11222222 45678999999999887653 233455555555554444
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|+.|++|||+||.||+++.+ +.++|+|||++...
T Consensus 114 l~~lH~~~ivHrdlkp~Nill~~~--~~~kL~Dfg~~~~~ 151 (324)
T cd05589 114 LQYLHENKIVYRDLKLDNLLLDTE--GFVKIADFGLCKEG 151 (324)
T ss_pred HHHHHhCCeEecCCCHHHeEECCC--CcEEeCcccCCccC
Confidence 788999999999999999999865 89999999987653
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.1e-12 Score=142.55 Aligned_cols=137 Identities=16% Similarity=0.135 Sum_probs=90.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||+.+...... ....+.+|.
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~~~E~ 54 (288)
T cd07871 11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG------------------------------------APCTAIREV 54 (288)
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEecccccCC------------------------------------cchhHHHHH
Confidence 67999999999999976 79999999875321100 000123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ ++ |.+++ . ....++||||++| +|.+.............+...+.++.
T Consensus 55 ~~l~~l~h------------------~n--iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~ 113 (288)
T cd07871 55 SLLKNLKH------------------AN--IVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLL 113 (288)
T ss_pred HHHHhCCC------------------CC--EeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 55544422 22 23333 2 3457899999997 66655432222234444444333333
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|+.|++|+|+||+|||++.+ ++++|+|||++....
T Consensus 114 ~aL~~LH~~~ivH~dlkp~Nil~~~~--~~~kl~DfG~~~~~~ 154 (288)
T cd07871 114 RGLSYCHKRKILHRDLKPQNLLINEK--GELKLADFGLARAKS 154 (288)
T ss_pred HHHHHHHhCCcccCCCCHHHEEECCC--CCEEECcCcceeecc
Confidence 788999999999999999999865 899999999987543
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.9e-12 Score=143.62 Aligned_cols=77 Identities=21% Similarity=0.213 Sum_probs=59.8
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~--~~~kl~Dfg~a~ 144 (330)
T cd05586 68 DSDLYLVTDYMSGGELFWHLQ-KEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDAT--GHIALCDFGLSK 144 (330)
T ss_pred CCeEEEEEcCCCCChHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC--CCEEEecCCcCc
Confidence 456789999999999876643 223455555555444444 788999999999999999999865 899999999986
Q ss_pred cc
Q 002927 204 KL 205 (864)
Q Consensus 204 ~l 205 (864)
..
T Consensus 145 ~~ 146 (330)
T cd05586 145 AN 146 (330)
T ss_pred CC
Confidence 53
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.9e-12 Score=139.71 Aligned_cols=154 Identities=17% Similarity=0.200 Sum_probs=97.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-||+|++|.|-+|+.. +|+.|||||....-.. +..........+...++ +..+|.
T Consensus 103 ~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~---------~~~~~~~~~a~~~~~~e--------------kv~~EI 159 (576)
T KOG0585|consen 103 KEIGSGQYGKVKLARDEVDGKLYAIKILPKKELR---------RQYGFPRQPAMKLMPIE--------------KVRREI 159 (576)
T ss_pred hhhcCCccceEEEEeecCCCcEEEEEeechhhhh---------hhcccccccccccCcHH--------------HHHHHH
Confidence 56999999999999975 8999999997521110 00000000000111111 134566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.-++++.|- .-|.+-+|.. +++.|||+|||..+.+...-. ....+.....-..+.+.+
T Consensus 160 ailKkl~H~-----------------nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~-d~~els~~~Ar~ylrDvv~ 221 (576)
T KOG0585|consen 160 AILKKLHHP-----------------NVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPP-DKPELSEQQARKYLRDVVL 221 (576)
T ss_pred HHHHhcCCc-----------------CeeEEEEeecCcccCceEEEEEeccCCccccCCC-CcccccHHHHHHHHHHHHH
Confidence 667776441 1244455553 678899999999988876421 111122222222232332
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
|+++|.+||+|||+||.|+|++.+ |+++|.|||.+...+.
T Consensus 222 GLEYLH~QgiiHRDIKPsNLLl~~~--g~VKIsDFGVs~~~~~ 262 (576)
T KOG0585|consen 222 GLEYLHYQGIIHRDIKPSNLLLSSD--GTVKISDFGVSNEFPQ 262 (576)
T ss_pred HHHHHHhcCeeccccchhheEEcCC--CcEEeeccceeeeccc
Confidence 889999999999999999999976 9999999998876643
|
|
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.4e-12 Score=143.01 Aligned_cols=140 Identities=14% Similarity=0.112 Sum_probs=91.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+++.+ +++.||||+..... ....+ . ...+..|.
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~~~~~--------------------------~------~~~~~~e~ 52 (332)
T cd05623 7 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWE--MLKRA--------------------------E------TACFREER 52 (332)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEeHHH--HHHhh--------------------------H------HHHHHHHH
Confidence 67999999999999986 68899999864210 00000 0 00122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+..+. ++ .+..++. ....+|||||++|++|.++.......+....+...+.++.
T Consensus 53 ~~l~~~~------------------~~--~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~ 112 (332)
T cd05623 53 DVLVNGD------------------NQ--WITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMV 112 (332)
T ss_pred HHHhhCC------------------CC--CEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 3322221 11 2333332 4567899999999999888643223344444333333333
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|||+||.||+++.+ +.++|+|||++..+.
T Consensus 113 ~al~~lH~~~iiHrDlkp~Nili~~~--~~~kL~DfG~a~~~~ 153 (332)
T cd05623 113 IAIDSVHQLHYVHRDIKPDNILMDMN--GHIRLADFGSCLKLM 153 (332)
T ss_pred HHHHHHHHCCeEecCCCHHHEEECCC--CCEEEeecchheecc
Confidence 788999999999999999999865 899999999887653
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.1e-12 Score=139.04 Aligned_cols=139 Identities=18% Similarity=0.204 Sum_probs=92.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-||.|.+|.||.++++ ++...|+||.-..... .. +++.+ ...|.
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~---~r----kKl~R---------------------------a~tE~ 128 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLA---SR----KKLKR---------------------------AQTER 128 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHHHHh---hh----hHHHH---------------------------HHHHH
Confidence 67999999999999997 5789999996432111 00 00000 11132
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cC--CceEEEeecCCcCCCChHHHhhcCCCHHHHHH---HHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SS--ETVLILEFMDGIRLNDCESLEAFGVNKQKVVE---EIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~--~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~---~~~ 162 (864)
.-+..+ .+..+|.+|. .+ -.+||||||+|+.|..+.+.+....=.+..++ .=+
T Consensus 129 eIL~~l--------------------DHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEv 188 (459)
T KOG0610|consen 129 EILSLL--------------------DHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEV 188 (459)
T ss_pred HHHHhc--------------------CCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHH
Confidence 233332 2356788885 33 35799999999999877543322211111111 112
Q ss_pred HHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 163 RAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 163 ~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
-+.|+++|-.|||.|||||+||||+++ |.|.|.||-++.+.
T Consensus 189 l~ALEYLHmlGivYRDLKPENILvred--GHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 189 LLALEYLHMLGIVYRDLKPENILVRED--GHIMLSDFDLSLRC 229 (459)
T ss_pred HHHHHHHHhhceeeccCCcceeEEecC--CcEEeeeccccccC
Confidence 233889999999999999999999976 99999999998765
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.5e-12 Score=143.51 Aligned_cols=143 Identities=19% Similarity=0.099 Sum_probs=92.9
Q ss_pred cccccccceeeEEEEec-C-CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATLV-D-GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~-G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+.||+|++|.||+|+.+ + +..||||+....... .. +. .-.+.+|
T Consensus 36 ~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~--~~--------------------------~~------~~~~~~E 81 (340)
T PTZ00426 36 RTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKII--KQ--------------------------KQ------VDHVFSE 81 (340)
T ss_pred EEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhh--hh--------------------------hh------HHHHHHH
Confidence 78999999999999865 3 468999976421100 00 00 0013445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
.+.+..+.+. .-+.+-..+. ....+|||||++|.+|.++... ...+....+...+.+++
T Consensus 82 ~~~l~~l~hp-----------------~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~a 143 (340)
T PTZ00426 82 RKILNYINHP-----------------FCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRR-NKRFPNDVGCFYAAQIVLI 143 (340)
T ss_pred HHHHHhCCCC-----------------CCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHH
Confidence 5555554321 0111222222 4567899999999999877542 22344444333333333
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||+|||++.+ +.++|+|||++..+..
T Consensus 144 L~~LH~~~ivHrDLkp~NILl~~~--~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 144 FEYLQSLNIVYRDLKPENLLLDKD--GFIKMTDFGFAKVVDT 183 (340)
T ss_pred HHHHHHCCeEccCCCHHHEEECCC--CCEEEecCCCCeecCC
Confidence 788999999999999999999865 8999999999987654
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.35 E-value=4e-12 Score=137.97 Aligned_cols=143 Identities=15% Similarity=0.129 Sum_probs=97.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|... +|+.||||+......... ..+..+.+|+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----------------------------------~~~~~~~~E~ 51 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR----------------------------------KGEAMALNEK 51 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhh----------------------------------hhHHHHHHHH
Confidence 56999999999999975 799999998654221100 0122244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++++. ..+.+...+. ....++||||++|.+|.+...... ..++...+...+.+++
T Consensus 52 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~ 114 (285)
T cd05605 52 QILEKVNSR-----------------FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCG 114 (285)
T ss_pred HHHHhcCCC-----------------CEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHH
Confidence 665555321 1122222222 356789999999999987653222 2355555555555544
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|.||+++++ +.++|+|||++..+.
T Consensus 115 l~~lH~~~ivH~dlkp~Nil~~~~--~~~~l~Dfg~~~~~~ 153 (285)
T cd05605 115 LEDLHRERIVYRDLKPENILLDDY--GHIRISDLGLAVEIP 153 (285)
T ss_pred HHHHHHCCcEecCCCHHHEEECCC--CCEEEeeCCCceecC
Confidence 778999999999999999999865 889999999987664
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.3e-12 Score=141.00 Aligned_cols=141 Identities=19% Similarity=0.179 Sum_probs=95.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|+||+|+.+ +|..||+|+.+........ . .+.+|.
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------~------~~~~E~ 54 (331)
T cd06649 11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIR------------------------------N------QIIREL 54 (331)
T ss_pred EeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHH------------------------------H------HHHHHH
Confidence 57999999999999986 7999999998754322111 1 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.+. .-+.+..++. ....+|||||++|.+|.++... ........+...+.++. +
T Consensus 55 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l 116 (331)
T cd06649 55 QVLHECNSP-----------------YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGL 116 (331)
T ss_pred HHHHHCCCC-----------------CCCeEEEEEEECCEEEEEeecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHH
Confidence 555544321 0122222332 4567899999999999887542 22344444444443333 6
Q ss_pred HHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|. .+++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 117 ~~lH~~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 117 AYLREKHQIMHRDVKPSNILVNSR--GEIKLCDFGVSGQLID 156 (331)
T ss_pred HHHhhcCCEEcCCCChhhEEEcCC--CcEEEccCcccccccc
Confidence 77886 479999999999999865 8999999999876643
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.9e-12 Score=137.29 Aligned_cols=143 Identities=15% Similarity=0.121 Sum_probs=98.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+..+...... ..+..+.+|+
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~----------------------------------~~~~~~~~E~ 51 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKR----------------------------------KGESMALNEK 51 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhh----------------------------------hHHHHHHHHH
Confidence 56999999999999975 799999998754321100 0011234466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++++. ..+.+...+. ....+++|||++|.+|.+...... ..++...+...+.+++
T Consensus 52 ~il~~l~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~ 114 (285)
T cd05632 52 QILEKVNSQ-----------------FVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCG 114 (285)
T ss_pred HHHHHcCCc-----------------CceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 666555331 1122333333 456789999999999887653222 2455666666555554
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||+||+++.+ +.++|+|||++..++
T Consensus 115 l~~lH~~~iiH~dikp~Nili~~~--~~~kl~Dfg~~~~~~ 153 (285)
T cd05632 115 LEDLHRENTVYRDLKPENILLDDY--GHIRISDLGLAVKIP 153 (285)
T ss_pred HHHHHhCCeeecCCCHHHEEECCC--CCEEEecCCcceecC
Confidence 788999999999999999999865 789999999887654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.35 E-value=5.2e-13 Score=147.98 Aligned_cols=178 Identities=17% Similarity=0.233 Sum_probs=118.2
Q ss_pred ccccccccccccccccceeeEEEEec-CCCEEEEEEec-CChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHh
Q 002927 2 GGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQH-QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 79 (864)
Q Consensus 2 ~~~F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~-p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~ 79 (864)
+.+|.++ +-||-||||-||.|+.. +.+.||||-.. -|-.. .+.|.
T Consensus 25 Eklf~dL--rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs----------------------------~EKWq--- 71 (948)
T KOG0577|consen 25 EKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS----------------------------NEKWQ--- 71 (948)
T ss_pred HHHHHHH--HHhcCCccceeEEeeccCccceeeeeecccccccc----------------------------HHHHH---
Confidence 4456655 45999999999999975 78899999532 22111 11111
Q ss_pred HhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHH
Q 002927 80 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 158 (864)
Q Consensus 80 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~ 158 (864)
|...|.+.+.++++.. .|..--.|. ....+||||||-| +-+|+....+.++...+|+
T Consensus 72 ----DIlKEVrFL~~l~HPn-----------------tieYkgCyLre~TaWLVMEYClG-SAsDlleVhkKplqEvEIA 129 (948)
T KOG0577|consen 72 ----DILKEVRFLRQLRHPN-----------------TIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIA 129 (948)
T ss_pred ----HHHHHHHHHHhccCCC-----------------cccccceeeccchHHHHHHHHhc-cHHHHHHHHhccchHHHHH
Confidence 2233444444443310 111111122 4667899999986 5567777777788788888
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHH------HHHHHHHHHhCCHHHHHH
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQA------LAKMFFAAAEGDHVALLS 230 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~------~~~l~~a~~~~d~~~~~~ 230 (864)
..+...+ +.++|.++.||||+|.||||+.+. |.++|.|||.+...++...-. --++++|+-++-|++=++
T Consensus 130 Ai~~gaL~gLaYLHS~~~IHRDiKAGNILLse~--g~VKLaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYdgkvD 207 (948)
T KOG0577|consen 130 AITHGALQGLAYLHSHNRIHRDIKAGNILLSEP--GLVKLADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVD 207 (948)
T ss_pred HHHHHHHHHHHHHHHhhHHhhhccccceEecCC--CeeeeccccchhhcCchhcccCCccccchhHheeccccccCCccc
Confidence 8777766 889999999999999999999964 999999999988877654321 124555665666665555
Q ss_pred HHHHcCC
Q 002927 231 AFAEMGL 237 (864)
Q Consensus 231 ~~~~~G~ 237 (864)
.+ .+|+
T Consensus 208 vW-SLGI 213 (948)
T KOG0577|consen 208 VW-SLGI 213 (948)
T ss_pred ee-eccc
Confidence 43 4554
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.5e-12 Score=142.91 Aligned_cols=145 Identities=19% Similarity=0.214 Sum_probs=105.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|.||+||+++.+ +|+.+|+|+........-. ..-+..+|.
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~----------------------------------~~~~v~~Ev 86 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKE----------------------------------DREDVRREV 86 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccc----------------------------------cHHHHHHHH
Confidence 67999999999999987 6999999986432211000 111345577
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.++++... ...+.++.+|. ....+||||+++|+.|.|...-. .+...+.+..+.+.. +
T Consensus 87 ~il~~l~~h----------------pniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av 148 (382)
T KOG0032|consen 87 AILQQLSGH----------------PNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAV 148 (382)
T ss_pred HHHHhccCC----------------CCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHH
Confidence 777776421 22477888887 56788999999999998875432 355555544444433 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccCC--CCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDP--PHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~--~g~i~LiDFG~~~~l~~ 207 (864)
+++|..|++|||+||+|+|+.... +++++++|||++..+..
T Consensus 149 ~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~ 191 (382)
T KOG0032|consen 149 KYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP 191 (382)
T ss_pred HHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence 899999999999999999997542 35899999999998876
|
|
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.34 E-value=5.7e-12 Score=136.18 Aligned_cols=141 Identities=16% Similarity=0.148 Sum_probs=91.8
Q ss_pred cccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHHH
Q 002927 13 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 91 (864)
Q Consensus 13 lasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n 91 (864)
||+|++|+||+++.+ +|+.||+|+........ . ..+-.+..|...
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~---~-------------------------------~~~~~~~~E~~i 46 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKK---K-------------------------------SGEKMALLEKEI 46 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhc---c-------------------------------hhhHHHHHHHHH
Confidence 689999999999976 79999999764311100 0 000112224444
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHHH--H
Q 002927 92 TRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~~--l 166 (864)
+.++.+ +.+ .+-..+. ....+|+|||++|.+|.+..... ..+.+...+...+.+++ +
T Consensus 47 l~~l~h------------------p~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al 108 (277)
T cd05607 47 LEKVNS------------------PFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGI 108 (277)
T ss_pred HHhcCC------------------CcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHH
Confidence 444321 222 1222222 45678999999999997664321 22345555544444433 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 109 ~~lH~~~ivH~dikp~Nili~~~--~~~~l~Dfg~~~~~~~ 147 (277)
T cd05607 109 LHLHSMDIVYRDMKPENVLLDDQ--GNCRLSDLGLAVELKD 147 (277)
T ss_pred HHHHHCCEEEccCChHhEEEcCC--CCEEEeeceeeeecCC
Confidence 88999999999999999999865 8899999999876543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.1e-12 Score=141.21 Aligned_cols=140 Identities=15% Similarity=0.150 Sum_probs=90.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.++..... ..+.. .+..|.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~---------------------------------~~~~e~ 46 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLM-DDDVE---------------------------------CTMVEK 46 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-cchHH---------------------------------HHHHHH
Confidence 35899999999999976 68999999987533110 00000 011233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+... + +++. +.+-..+. ....+|||||++|.+|.+.... ....+...+...+.+++
T Consensus 47 ~~l~~~---~--------------~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~a 108 (316)
T cd05619 47 RVLSLA---W--------------EHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQS-CHKFDLPRATFYAAEIICG 108 (316)
T ss_pred HHHHhc---c--------------CCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHH
Confidence 222221 1 1111 11222222 4557899999999999876532 22344444444444433
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+..+|..|++|||+||.||+++.+ +.++|+|||++..
T Consensus 109 l~~LH~~~ivHrdikp~Nil~~~~--~~~kl~Dfg~~~~ 145 (316)
T cd05619 109 LQFLHSKGIVYRDLKLDNILLDTD--GHIKIADFGMCKE 145 (316)
T ss_pred HHHHHhCCeEeCCCCHHHEEECCC--CCEEEccCCcceE
Confidence 788999999999999999999865 8999999999865
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.8e-12 Score=140.85 Aligned_cols=139 Identities=15% Similarity=0.132 Sum_probs=90.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +++.||||+.+...... .+..+.+|.
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~~~E~ 55 (309)
T cd07872 12 EKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG------------------------------------APCTAIREV 55 (309)
T ss_pred EEecccCCEEEEEEEecCCCCeEEEEEeeccccCC------------------------------------cchhHHHHH
Confidence 67999999999999976 78999999865432110 001133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++++. .-+.+-..+. ....++||||+++ ++.+.............+...+.+++ +
T Consensus 56 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL 117 (309)
T cd07872 56 SLLKDLKHA-----------------NIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGL 117 (309)
T ss_pred HHHHhCCCC-----------------CcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 555554321 1122233333 5668899999986 55444322222234444433333333 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+|..|++|||+||+||+++.+ +.++|+|||++...
T Consensus 118 ~~lH~~~ivH~dlkp~Nill~~~--~~~kl~Dfg~~~~~ 154 (309)
T cd07872 118 AYCHRRKVLHRDLKPQNLLINER--GELKLADFGLARAK 154 (309)
T ss_pred HHHHHCCeecCCCCHHHEEECCC--CCEEECccccceec
Confidence 88999999999999999999865 89999999998754
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.8e-12 Score=144.90 Aligned_cols=143 Identities=22% Similarity=0.241 Sum_probs=101.9
Q ss_pred ccccc-cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 6 MDFVE-TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 6 ~~fd~-~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
..|++ .-||.|+||.||+|.+.+|+.||||...+..... +.+
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-------------------------------------~~e 117 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-------------------------------------ERE 117 (361)
T ss_pred hCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-------------------------------------hhH
Confidence 35654 6899999999999999999999999665443210 122
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEec---C-CceEEEeecCCcCCCChHHHhhc-CCC---HHH
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS---S-ETVLILEFMDGIRLNDCESLEAF-GVN---KQK 156 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~---~-~~vLvmE~i~G~~L~~~~~~~~~-~~~---~~~ 156 (864)
|.+|...+.+++|. + .|.-+-+| + .++||.||++.++|.+.+..... .++ +-+
T Consensus 118 F~~Ei~~ls~l~H~------------------N-lv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~k 178 (361)
T KOG1187|consen 118 FLNEVEILSRLRHP------------------N-LVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLK 178 (361)
T ss_pred HHHHHHHHhcCCCc------------------C-cccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHH
Confidence 77788887777541 1 12222222 4 48999999999999987543322 233 234
Q ss_pred HHHHHHHHHHHHHHhcC---eeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 157 VVEEITRAYAHQIYVDG---FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 157 l~~~~~~~~l~~i~~~G---~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
|+..+++. +..+|... |+|||+||.|||++++ .+.+|.|||+++..+.
T Consensus 179 Ia~g~A~g-L~yLH~~~~~~iiHrDiKssNILLD~~--~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 179 IALGAARG-LAYLHEGCPPPIIHRDIKSSNILLDED--FNAKLSDFGLAKLGPE 229 (361)
T ss_pred HHHHHHHH-HHHHccCCCCCEecCCCCHHHeeECCC--CCEEccCccCcccCCc
Confidence 55555554 77888754 9999999999999965 9999999999966654
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.6e-12 Score=143.89 Aligned_cols=140 Identities=18% Similarity=0.188 Sum_probs=92.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-||.||+|.||+|+.+ +++-||+|.....-+ -+.|++.+ .+|++..++.
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr--~~k~l~~l---------------------------~~ev~i~r~l 58 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR--NEKELKNL---------------------------RQEVRILRSL 58 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhcCC--chHHHHHH---------------------------HHHHHHHHhc
Confidence 45999999999999987 899999998532111 12233322 2333333333
Q ss_pred H--HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 E--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~--n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+ |+..|.+.|+. +.+.++|.||+.| +|..++..+ ..+..+.+-+...+.+
T Consensus 59 kHpniv~m~esfEt------------------------~~~~~vVte~a~g-~L~~il~~d-~~lpEe~v~~~a~~LVsa 112 (808)
T KOG0597|consen 59 KHPNIVEMLESFET------------------------SAHLWVVTEYAVG-DLFTILEQD-GKLPEEQVRAIAYDLVSA 112 (808)
T ss_pred CCcchhhHHHhhcc------------------------cceEEEEehhhhh-hHHHHHHhc-cCCCHHHHHHHHHHHHHH
Confidence 2 33344333321 4556899999999 777765422 2233333333333333
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++.+|..+|+|||+||.||++... |.++|+|||+++..+.
T Consensus 113 L~yLhs~rilhrd~kPqniLl~~~--~~~KlcdFg~Ar~m~~ 152 (808)
T KOG0597|consen 113 LYYLHSNRILHRDMKPQNILLEKG--GTLKLCDFGLARAMST 152 (808)
T ss_pred HHHHHhcCcccccCCcceeeecCC--Cceeechhhhhhhccc
Confidence 889999999999999999999854 8999999999987765
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.34 E-value=5e-12 Score=153.42 Aligned_cols=142 Identities=13% Similarity=0.095 Sum_probs=94.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.+......- ... -+|.+|+
T Consensus 8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e----------------------------~~~------~rflrEi 53 (932)
T PRK13184 8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENP----------------------------LLK------KRFLREA 53 (932)
T ss_pred EEEecCCCEEEEEEEECCCCcEEEEEEECcccccCH----------------------------HHH------HHHHHHH
Confidence 67999999999999976 799999998765332110 000 1244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhh----------cCCCHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA----------FGVNKQKVV 158 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~----------~~~~~~~l~ 158 (864)
+.+.++.+. .-+.+-.+.. ....+++|||++|.+|.++..... .+.+...+.
T Consensus 54 ~ILs~L~HP-----------------NIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL 116 (932)
T PRK13184 54 KIAADLIHP-----------------GIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFL 116 (932)
T ss_pred HHHHhCCCc-----------------CcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHH
Confidence 555554321 0112222222 456789999999999988754210 111223333
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+.++. +..+|..|++|||+||+||+++.+ |.++|+|||++..+
T Consensus 117 ~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~d--g~vKLiDFGLAk~i 163 (932)
T PRK13184 117 SIFHKICATIEYVHSKGVLHRDLKPDNILLGLF--GEVVILDWGAAIFK 163 (932)
T ss_pred HHHHHHHHHHHHHHHCCccccCCchheEEEcCC--CCEEEEecCcceec
Confidence 3333333 778999999999999999999865 89999999998866
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.1e-11 Score=146.51 Aligned_cols=140 Identities=21% Similarity=0.341 Sum_probs=96.9
Q ss_pred ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 10 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.+.||+|++|.||+|++ .++.+++|+..+.....- ++. +. ...-.+.+|+
T Consensus 338 ~~~iG~G~~g~Vy~~~~-~~~~~v~k~~~~~~~~~~--~~~----------------------~~-----~~~~~~~~E~ 387 (535)
T PRK09605 338 DHLIGKGAEADIKKGEY-LGRDAVIKERVPKGYRHP--ELD----------------------ER-----LRTERTRAEA 387 (535)
T ss_pred cceeccCCcEEEEEEee-cCccceeEEEecccccch--hHH----------------------HH-----HHHHHHHHHH
Confidence 57899999999999987 455677776543221100 000 00 0111256788
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAH 167 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~ 167 (864)
+.+.++++ ..+.+|.++. ....+|||||++|.+|.+... ....++..+.+. +.
T Consensus 388 ~~l~~l~~------------------~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~------~~~~~~~~i~~~-L~ 442 (535)
T PRK09605 388 RLLSEARR------------------AGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE------GNPELVRKVGEI-VA 442 (535)
T ss_pred HHHHhhcc------------------cCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH------HHHHHHHHHHHH-HH
Confidence 88877754 2355666665 457899999999999987643 123455555544 67
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++|..|++|||+||+|||+. + ++++|+|||+++..+.
T Consensus 443 ~lH~~giiHrDlkp~NILl~-~--~~~~liDFGla~~~~~ 479 (535)
T PRK09605 443 KLHKAGIVHGDLTTSNFIVR-D--DRLYLIDFGLGKYSDL 479 (535)
T ss_pred HHHhCCCccCCCChHHEEEE-C--CcEEEEeCcccccCCc
Confidence 89999999999999999993 3 7899999999987654
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.33 E-value=5.2e-12 Score=142.92 Aligned_cols=51 Identities=14% Similarity=0.237 Sum_probs=39.8
Q ss_pred HHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 155 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 155 ~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 214 ~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~--~~~kl~DfG~a~~~~~ 266 (375)
T cd05104 214 EDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHG--RITKICDFGLARDIRN 266 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECC--CcEEEecCccceeccC
Confidence 33344334433 788899999999999999999864 7899999999887654
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.33 E-value=8.7e-12 Score=133.91 Aligned_cols=152 Identities=20% Similarity=0.190 Sum_probs=98.2
Q ss_pred cccccccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 5 FMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 5 F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
|.++..++||+|++|+||+|... +|+.||||..+.........+.. ..+..+
T Consensus 1 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~---------------------~~~~~~------ 53 (272)
T cd06629 1 FKWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSR---------------------QKDMVK------ 53 (272)
T ss_pred CceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchH---------------------HHHHHH------
Confidence 66777899999999999999965 79999999765322211100000 000111
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHH
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 159 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~ 159 (864)
.+..|+..+.++.+ + .+++++. ....++||||++|.+|.+..... ..++...+..
T Consensus 54 ~~~~e~~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~ 112 (272)
T cd06629 54 ALRSEIETLKDLDH------------------L--NIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRF 112 (272)
T ss_pred HHHHHHHHHHhcCC------------------C--CcceEEEEeccCCceEEEEecCCCCcHHHHHhhc-cCCCHHHHHH
Confidence 13345544444422 1 2233332 45678999999999998875422 2334333333
Q ss_pred HHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 160 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 160 ~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+.+++ +..+|+.|++|+|++|+||+++.+ +.++|+|||++....
T Consensus 113 ~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~--~~~~l~d~~~~~~~~ 159 (272)
T cd06629 113 FTEQVLEGLAYLHSKGILHRDLKADNLLVDAD--GICKISDFGISKKSD 159 (272)
T ss_pred HHHHHHHHHHHHhhCCeeecCCChhhEEEcCC--CeEEEeecccccccc
Confidence 222222 678899999999999999999865 899999999987654
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.33 E-value=5e-12 Score=139.53 Aligned_cols=138 Identities=21% Similarity=0.235 Sum_probs=93.4
Q ss_pred cccccccceeeEEEEe----cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATL----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|++|.||+++. .+|+.||||+.+...... . ....+.
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~--~---------------------------------~~~~~~ 46 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKV--R---------------------------------DRVRTK 46 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhh--h---------------------------------hHHHHH
Confidence 4689999999999985 268999999876321100 0 001133
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
.|.+.+.++.+ + .|.+++ . ....+|||||++|.+|.+... ....++...+...+.
T Consensus 47 ~E~~~l~~l~h------------------~--niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~ 105 (318)
T cd05582 47 MERDILAEVNH------------------P--FIVKLHYAFQTEGKLYLILDFLRGGDLFTRLS-KEVMFTEEDVKFYLA 105 (318)
T ss_pred HHHHHHHhCCC------------------C--CcccEEEEEEcCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHH
Confidence 45555555432 1 122332 2 456789999999999877643 222345555554444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 106 qi~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kL~Dfg~~~~~~ 149 (318)
T cd05582 106 ELALALDHLHSLGIIYRDLKPENILLDEE--GHIKLTDFGLSKESI 149 (318)
T ss_pred HHHHHHHHHHHCCEecCCCCHHHeEECCC--CcEEEeeccCCcccC
Confidence 443 788999999999999999999865 899999999987654
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.33 E-value=8.3e-12 Score=135.12 Aligned_cols=78 Identities=19% Similarity=0.181 Sum_probs=60.1
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....++||||++|.+|.+.... ...+....+...+.+++ +..+|..|++|+|+||+||+++++ +.++|+|||++.
T Consensus 69 ~~~~~lv~e~~~~~~L~~~i~~-~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~--~~~~l~dfg~~~ 145 (279)
T cd05633 69 PDKLCFILDLMNGGDLHYHLSQ-HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEH--GHVRISDLGLAC 145 (279)
T ss_pred CCeEEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCC--CCEEEccCCcce
Confidence 4567899999999999776432 23345555555444443 789999999999999999999865 899999999987
Q ss_pred ccC
Q 002927 204 KLS 206 (864)
Q Consensus 204 ~l~ 206 (864)
.+.
T Consensus 146 ~~~ 148 (279)
T cd05633 146 DFS 148 (279)
T ss_pred ecc
Confidence 554
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.33 E-value=5.2e-12 Score=134.24 Aligned_cols=140 Identities=20% Similarity=0.261 Sum_probs=99.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||+|+....-....... ...+|+
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~-----------------------------------~~~~e~ 49 (260)
T PF00069_consen 5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEERE-----------------------------------ENIREI 49 (260)
T ss_dssp EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHH-----------------------------------HHHHHH
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccc-----------------------------------hhhhhh
Confidence 57999999999999987 678999999775533221100 011256
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.++++++. .-+.+-.++. ....+++|||++|.+|.++.. ....++...+...+.+++ +
T Consensus 50 ~~~~~l~~~-----------------~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L 111 (260)
T PF00069_consen 50 KILRRLRHP-----------------NIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEAL 111 (260)
T ss_dssp HHHHHHTBT-----------------TBCHEEEEEEESSEEEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHH
T ss_pred hcccccccc-----------------cccccccccccccccccccccccccccccccc-ccccccccccccccccccccc
Confidence 666665321 1122233333 566789999999999888765 344556666666555555 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+|+.|++|+|++|.||+++.+ ++++|+|||++..+
T Consensus 112 ~~Lh~~~i~H~dikp~NIl~~~~--~~~~l~Dfg~~~~~ 148 (260)
T PF00069_consen 112 AYLHSKGIVHRDIKPENILLDEN--GEVKLIDFGSSVKL 148 (260)
T ss_dssp HHHHHTTEEESSBSGGGEEESTT--SEEEESSGTTTEES
T ss_pred ccccccccccccccccccccccc--cccccccccccccc
Confidence 89999999999999999999955 89999999998753
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.7e-12 Score=144.87 Aligned_cols=134 Identities=16% Similarity=0.185 Sum_probs=96.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCCh------HHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGI------KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i------~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
+-||.||-|.|..|+.. +|+.+||||.-... ...|++++-
T Consensus 18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIv--------------------------------- 64 (786)
T KOG0588|consen 18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIV--------------------------------- 64 (786)
T ss_pred ccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhH---------------------------------
Confidence 57999999999999975 89999999864321 112222222
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
-++-+.| ...+..-.|+. ..+.+||.||++|+.|.++.. .+.++...+.++.+.
T Consensus 65 -------iMkLi~H-----------------pnVl~LydVwe~~~~lylvlEyv~gGELFdylv-~kG~l~e~eaa~ff~ 119 (786)
T KOG0588|consen 65 -------IMKLIEH-----------------PNVLRLYDVWENKQHLYLVLEYVPGGELFDYLV-RKGPLPEREAAHFFR 119 (786)
T ss_pred -------HHHHhcC-----------------CCeeeeeeeeccCceEEEEEEecCCchhHHHHH-hhCCCCCHHHHHHHH
Confidence 2222222 11233444444 567899999999999999864 455666666666666
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+++ +..+|..+|+|||+||+|+|++.. ++|+|.||||+..
T Consensus 120 QIi~gv~yCH~~~icHRDLKpENlLLd~~--~nIKIADFGMAsL 161 (786)
T KOG0588|consen 120 QILDGVSYCHAFNICHRDLKPENLLLDVK--NNIKIADFGMASL 161 (786)
T ss_pred HHHHHHHHHhhhcceeccCCchhhhhhcc--cCEeeeccceeec
Confidence 655 677899999999999999999976 6699999999864
|
|
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.32 E-value=7.4e-12 Score=138.00 Aligned_cols=139 Identities=18% Similarity=0.163 Sum_probs=95.3
Q ss_pred cccccccceeeEEEEec-CCC----EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV-DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~----~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||+|++|+||+|++. +|+ .||||+.++....... -++
T Consensus 13 ~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~ 56 (316)
T cd05108 13 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------------------------------------KEI 56 (316)
T ss_pred eeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHH------------------------------------HHH
Confidence 67999999999999964 454 4899987643221110 013
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
..|+..+..+.+ + .|.+++. ....+++|||+++++|.+.........+...+...+.
T Consensus 57 ~~e~~~l~~l~h------------------~--niv~~~g~~~~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~ 116 (316)
T cd05108 57 LDEAYVMASVDN------------------P--HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 116 (316)
T ss_pred HHHHHHHHhCCC------------------C--CCCeEEEEEcCCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHH
Confidence 345544444322 1 1223332 4567899999999999887543333345555555554
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++. +..+|+.|++|+|+||.||+++.+ +.++|+|||+++.+..
T Consensus 117 qi~~~L~~LH~~~iiH~dlkp~Nill~~~--~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 117 QIAKGMNYLEERRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 161 (316)
T ss_pred HHHHHHHHHHhcCeeccccchhheEecCC--CcEEEccccccccccC
Confidence 544 788999999999999999999865 8899999999987654
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.1e-11 Score=128.23 Aligned_cols=185 Identities=18% Similarity=0.208 Sum_probs=129.5
Q ss_pred ccccccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 6 MDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 6 ~~fd~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.+. ++||-|-=+-||.|....|++||||.-|-|.. .++. +-+........-...++ .. .-+.-
T Consensus 93 e~iG-~~IGvGKEsdVY~~~~~~g~~~~vKfHR~Grt-sFrk-------vk~~R~y~~~~~h~sWl-~~------sRl~A 156 (304)
T COG0478 93 EAIG-TKIGVGKESDVYVAIDPKGRKVAVKFHRLGRT-SFRK-------VKRNRDYLADKEHGSWL-YV------SRLAA 156 (304)
T ss_pred Hhhc-cccccCccceEEEEECCCCCEEEEEEeecCch-hhhh-------hcchhhhhccccCcchh-hh------HHHHH
Confidence 3444 78999999999999998999999999888743 2221 11111111000111111 10 11112
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
.+|-+.+.++.. .++.||+++.-+++++||||++|..|..+.- ...+..+++..+++.+
T Consensus 157 ~rEf~~L~~L~~------------------~G~~VP~P~~~nRHaVvMe~ieG~eL~~~r~---~~en~~~il~~il~~~ 215 (304)
T COG0478 157 EREFEALQRLYP------------------EGVKVPKPIAWNRHAVVMEYIEGVELYRLRL---DVENPDEILDKILEEV 215 (304)
T ss_pred HHHHHHHHHhhh------------------cCCCCCCccccccceeeeehcccceeecccC---cccCHHHHHHHHHHHH
Confidence 345556666543 2578999999999999999999999987631 2345677777777765
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHHcCC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGL 237 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~G~ 237 (864)
- -+.+.|++|+|+.+-||+|++| |.+++|||-.+...+.+.-..+ +++|.+.+++.|+.-..
T Consensus 216 ~-~~~~~GiVHGDlSefNIlV~~d--g~~~vIDwPQ~v~~~hp~a~e~-------l~RDv~nii~yFrrky~ 277 (304)
T COG0478 216 R-KAYRRGIVHGDLSEFNILVTED--GDIVVIDWPQAVPISHPDAEEL-------LERDVENIIKYFRRKYG 277 (304)
T ss_pred H-HHHHcCccccCCchheEEEecC--CCEEEEeCcccccCCCCCHHHH-------HHhHHHHHHHHHHHhcc
Confidence 4 3458999999999999999976 8999999999988877665554 67899999999886544
|
|
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.32 E-value=7.6e-12 Score=137.15 Aligned_cols=137 Identities=12% Similarity=0.122 Sum_probs=91.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|+.+ +++.|+||+..+..... .... -++..|.
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~-~~~~---------------------------------~~~~~e~ 52 (305)
T cd05609 7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLIL-RNQI---------------------------------QQVFVER 52 (305)
T ss_pred eEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhh-HHHH---------------------------------HHHHHHH
Confidence 67999999999999976 78999999765432100 0000 0133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.+++ + ..|++++. ....+|||||++|.+|.++.... .......+...+.+++
T Consensus 53 ~~l~~~~------------------~--~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~ 111 (305)
T cd05609 53 DILTFAE------------------N--PFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNI-GALPVDMARMYFAETV 111 (305)
T ss_pred HHHHhCC------------------C--CCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHH
Confidence 4444332 1 23444443 34458999999999998875422 2233333333333333
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+..+|..|++|+|+||+||+++.+ +.++|+|||+++.
T Consensus 112 ~~l~~lH~~~i~H~dl~p~NIll~~~--~~~~l~dfg~~~~ 150 (305)
T cd05609 112 LALEYLHNYGIVHRDLKPDNLLITSM--GHIKLTDFGLSKI 150 (305)
T ss_pred HHHHHHHHCCccccCCchHHEEECCC--CCEEEeeCCCccc
Confidence 788999999999999999999865 8999999998763
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.32 E-value=9.1e-12 Score=133.00 Aligned_cols=139 Identities=19% Similarity=0.191 Sum_probs=94.8
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|+||+|+..++..||||+.+++-.. +-++.+|.+
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~--------------------------------------~~~~~~E~~ 53 (260)
T cd05069 12 VKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMM--------------------------------------PEAFLQEAQ 53 (260)
T ss_pred eeecCcCCCeEEEEEEcCCceEEEEEcccCCcc--------------------------------------HHHHHHHHH
Confidence 579999999999999877778999987654210 001344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--HH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~--l~ 167 (864)
.+.++.+. ..+.+...+.....+++|||++|.+|.++..... .......+...+.+++ +.
T Consensus 54 ~l~~l~h~-----------------~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~ 116 (260)
T cd05069 54 IMKKLRHD-----------------KLVPLYAVVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMA 116 (260)
T ss_pred HHHhCCCC-----------------CeeeEEEEEcCCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHH
Confidence 55544321 1122222223556789999999999988754221 1234444444443333 67
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+|+.|++|+|+||+||+++++ +.++|+|||++..+.
T Consensus 117 ~lH~~~i~H~dl~~~Nill~~~--~~~~l~dfg~~~~~~ 153 (260)
T cd05069 117 YIERMNYIHRDLRAANILVGDN--LVCKIADFGLARLIE 153 (260)
T ss_pred HHHhCCEeecccCcceEEEcCC--CeEEECCCccceEcc
Confidence 8899999999999999999865 899999999987664
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.31 E-value=7.9e-12 Score=133.40 Aligned_cols=140 Identities=19% Similarity=0.201 Sum_probs=97.5
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.|+.|++|+||+|+..++..||+|..+++.... -+|.+|+.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~--------------------------------------~~~~~E~~ 53 (260)
T cd05070 12 KKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSP--------------------------------------ESFLEEAQ 53 (260)
T ss_pred heeccccCceEEEEEecCCceeEEEEecCCCCCH--------------------------------------HHHHHHHH
Confidence 5699999999999998888899999887642210 01444555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--HH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~--l~ 167 (864)
-+.++.+. .-+.+.........+++|||++|.+|.++..... ...+...+...+.+++ +.
T Consensus 54 ~l~~l~~~-----------------~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~ 116 (260)
T cd05070 54 IMKKLRHD-----------------KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMA 116 (260)
T ss_pred HHHhcCCC-----------------ceEEEEeEECCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 55554321 1122233333566899999999999988754221 2244444444444443 77
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+|+.|++|+|++|.||+++++ +.++|+|||++..+..
T Consensus 117 ~lH~~~i~H~di~p~Nili~~~--~~~~l~dfg~~~~~~~ 154 (260)
T cd05070 117 YIERMNYIHRDLRSANILVGDG--LVCKIADFGLARLIED 154 (260)
T ss_pred HHHHCCcccCCCccceEEEeCC--ceEEeCCceeeeeccC
Confidence 8899999999999999999865 8899999999887643
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.2e-11 Score=117.49 Aligned_cols=137 Identities=20% Similarity=0.250 Sum_probs=98.4
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
.+++.|.=+.++.+.+ -|.++++|..-|.--..-+-|.++-+ -.-.+||+
T Consensus 2 ~~i~~GAEa~i~~~~~-~g~~av~K~Ri~K~YR~p~LD~klrr-----------------------------~Rt~~Ear 51 (204)
T COG3642 2 DLIKQGAEAIIYLTDF-LGLPAVVKERIPKRYRHPELDEKLRR-----------------------------ERTRREAR 51 (204)
T ss_pred chhhCCcceeEEeeec-cCcceEEEeecCcccCChHHHHHHHH-----------------------------HHHHHHHH
Confidence 4688899999999976 36679999865443332222322111 01456999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQ 168 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~ 168 (864)
.+.+++.. .|.+|.+|. .....|+||||+|..|.|..... +..+++.+-.. +.-
T Consensus 52 il~~a~~~------------------GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~-----~~~~~r~vG~~-vg~ 107 (204)
T COG3642 52 ILAKAREA------------------GVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA-----RPDLLREVGRL-VGK 107 (204)
T ss_pred HHHHHHHc------------------CCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc-----chHHHHHHHHH-HHH
Confidence 99988763 688999987 56778999999999998764322 23445544443 456
Q ss_pred HHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 169 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 169 i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+|..||+|+||.+.||++.. +++++||||+...
T Consensus 108 lH~~givHGDLTtsNiIl~~---~~i~~IDfGLg~~ 140 (204)
T COG3642 108 LHKAGIVHGDLTTSNIILSG---GRIYFIDFGLGEF 140 (204)
T ss_pred HHhcCeecCCCccceEEEeC---CcEEEEECCcccc
Confidence 79999999999999999984 4699999999763
|
|
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.31 E-value=8.1e-12 Score=133.39 Aligned_cols=139 Identities=17% Similarity=0.191 Sum_probs=98.0
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||.|++|.||+|...+++.||||..+++-.. +-++.+|.+
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~--------------------------------------~~~~~~e~~ 53 (261)
T cd05068 12 RKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD--------------------------------------PKDFLAEAQ 53 (261)
T ss_pred EEecccCCccEEEEEecCCeEEEEEeeCCCccc--------------------------------------HHHHHHHHH
Confidence 789999999999999877889999987653210 001344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--H
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~--l 166 (864)
.+.++.+.. -+.+..... ....+++|||++|.+|.++..... ...+...+...+.+++ +
T Consensus 54 ~l~~l~h~~-----------------i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l 116 (261)
T cd05068 54 IMKKLRHPK-----------------LIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGM 116 (261)
T ss_pred HHHHCCCCC-----------------ccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHH
Confidence 555543210 111222222 456789999999999988754322 2345555555555544 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+|..|++|+|+||+||+++++ +.++|+|||++..+.
T Consensus 117 ~~lH~~~i~H~dl~p~Nil~~~~--~~~~l~dfg~~~~~~ 154 (261)
T cd05068 117 AYLEAQNYIHRDLAARNVLVGEN--NICKVADFGLARVIK 154 (261)
T ss_pred HHHHhCCeeeccCCcceEEEcCC--CCEEECCcceEEEcc
Confidence 78899999999999999999865 889999999988775
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.31 E-value=8e-12 Score=134.88 Aligned_cols=139 Identities=18% Similarity=0.178 Sum_probs=95.1
Q ss_pred cccccccceeeEEEEec-CCC----EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV-DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~----~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||+|++|.||+|+.. +|+ .||||+.+......... ++
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~------------------------------------~~ 56 (279)
T cd05109 13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANK------------------------------------EI 56 (279)
T ss_pred eecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHH------------------------------------HH
Confidence 67999999999999964 665 48999876433221111 12
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
..|+..+.++.+ + .+++++. ....+++|||++|++|.+........+....+...+.
T Consensus 57 ~~e~~~l~~~~~------------------~--~i~~~~~~~~~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~ 116 (279)
T cd05109 57 LDEAYVMAGVGS------------------P--YVCRLLGICLTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCV 116 (279)
T ss_pred HHHHHHHHhcCC------------------C--CCceEEEEEcCCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHH
Confidence 334444333321 1 2233332 4567899999999999877543233355556666555
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++. +..+|+.|++|+|+||+||++..+ +.++|+|||++..+..
T Consensus 117 qi~~~L~~lH~~~iiH~dlkp~Nil~~~~--~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 117 QIAKGMSYLEEVRLVHRDLAARNVLVKSP--NHVKITDFGLARLLDI 161 (279)
T ss_pred HHHHHHHHHHHCCeeccccccceEEEcCC--CcEEECCCCceeeccc
Confidence 554 788999999999999999999854 7899999999887653
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.5e-12 Score=139.30 Aligned_cols=137 Identities=16% Similarity=0.178 Sum_probs=90.9
Q ss_pred ccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 12 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 12 plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
-||.|++|.||+|+.+ +++.||||+.+...... ..+.. .+..|.+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~---------------------------------~~~~e~~ 47 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQ-DDDVE---------------------------------CTMTEKR 47 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhHHH---------------------------------HHHHHHH
Confidence 4899999999999986 68999999876432100 00000 0223333
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.+..+.. + -.|++++ . ....++||||++|.+|.+... ....++...+...+.+++
T Consensus 48 il~~~~~-----------------h--~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~l~~~~~~~~~~qi~~ 107 (318)
T cd05570 48 VLALAGK-----------------H--PFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQ-RSGRFDEPRARFYAAEIVL 107 (318)
T ss_pred HHHhccC-----------------C--CCccceeeEEEcCCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHH
Confidence 3333211 1 1233333 2 455789999999999876643 222455555555444443
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..
T Consensus 108 ~l~~LH~~~ivH~dlkp~Nill~~~--~~~kl~Dfg~~~~ 145 (318)
T cd05570 108 GLQFLHERGIIYRDLKLDNVLLDSE--GHIKIADFGMCKE 145 (318)
T ss_pred HHHHHHhCCeEccCCCHHHeEECCC--CcEEecccCCCee
Confidence 778999999999999999999865 8999999998764
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.2e-11 Score=137.68 Aligned_cols=140 Identities=19% Similarity=0.167 Sum_probs=94.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||+|+.+........ -++.+|+
T Consensus 11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------------~~~~~E~ 54 (333)
T cd06650 11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIR------------------------------------NQIIREL 54 (333)
T ss_pred ccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHH------------------------------------HHHHHHH
Confidence 56999999999999986 7999999987654322110 0134466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.+. .-+.+...+. ....+|||||++|.+|.++.... ...+...+.....+++ +
T Consensus 55 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l 116 (333)
T cd06650 55 QVLHECNSP-----------------YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGL 116 (333)
T ss_pred HHHHHCCCC-----------------cccceeEEEEECCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHH
Confidence 555554321 0122222333 56688999999999998875422 2244444434333333 6
Q ss_pred HHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+|. .+++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 117 ~~lH~~~~ivH~dlkp~Nili~~~--~~~kL~Dfg~~~~~~ 155 (333)
T cd06650 117 TYLREKHKIMHRDVKPSNILVNSR--GEIKLCDFGVSGQLI 155 (333)
T ss_pred HHHHhcCCEEecCCChhhEEEcCC--CCEEEeeCCcchhhh
Confidence 67786 589999999999999865 889999999986553
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.31 E-value=9.5e-12 Score=133.48 Aligned_cols=140 Identities=14% Similarity=0.110 Sum_probs=94.6
Q ss_pred cccccccceeeEEEEec----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|+||+||+|+++ .+..||+|+.+.+..... +.+|.
T Consensus 11 ~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~------------------------------------~~~~~ 54 (266)
T cd05064 11 RILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQ------------------------------------RRGFL 54 (266)
T ss_pred eeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHH------------------------------------HHHHH
Confidence 67999999999999864 367899998765432111 01234
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+|...+.++.+. .-+.+-..+. ....+|||||++|.+|.++.......+....+...+.+++
T Consensus 55 ~e~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~ 117 (266)
T cd05064 55 AEALTLGQFDHS-----------------NIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLA 117 (266)
T ss_pred HHHHHHhcCCCC-----------------CcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 455544443220 0122222222 4678899999999999887653333445555555444444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|+.|++|+|+||.||+++.+ +.+++.|||.....
T Consensus 118 ~al~~lH~~~iiH~dikp~nili~~~--~~~~l~dfg~~~~~ 157 (266)
T cd05064 118 SGMKYLSEMGYVHKGLAAHKVLVNSD--LVCKISGFRRLQED 157 (266)
T ss_pred HHHHHHHHCCEeeccccHhhEEEcCC--CcEEECCCcccccc
Confidence 788999999999999999999865 89999999976553
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.5e-12 Score=137.35 Aligned_cols=142 Identities=20% Similarity=0.210 Sum_probs=92.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+...... +..+ .+.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~-----------------------------~~~~------~~~~E~ 51 (287)
T cd07848 7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENE-----------------------------EVKE------TTLREL 51 (287)
T ss_pred EEecccCCEEEEEEEECCCCcEEEEEEEecccccc-----------------------------cchh------hHHHHH
Confidence 67999999999999986 78999999875431100 0000 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+..++. ....+|||||++|..+..+.. ...+.....+...+.+++ +
T Consensus 52 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L 113 (287)
T cd07848 52 KMLRTLKQE-----------------NIVELKEAFRRRGKLYLVFEYVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAI 113 (287)
T ss_pred HHHHhCCCc-----------------cccchhhhEecCCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHH
Confidence 433333221 0111112222 455689999999976654422 223455555555554444 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 114 ~~lH~~~i~H~dlkp~Nill~~~--~~~kl~Dfg~~~~~~~ 152 (287)
T cd07848 114 HWCHKNDIVHRDIKPENLLISHN--DVLKLCDFGFARNLSE 152 (287)
T ss_pred HHHHHCCeecCCCCHHHEEEcCC--CcEEEeeccCcccccc
Confidence 88899999999999999999865 8999999999887653
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.7e-12 Score=136.75 Aligned_cols=140 Identities=21% Similarity=0.285 Sum_probs=95.7
Q ss_pred cccccccceeeEEEEe-cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-||+|.+|.|-+|+. +.|+.||||..|.+.-+. +.|+-- .++|.
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkd-eqDlvh---------------------------------IRREI 104 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKD-EQDLVH---------------------------------IRREI 104 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhhhhccc-HHHHHH---------------------------------HHHHH
Confidence 5699999999999996 489999999655332110 122211 23344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCH---HHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNK---QKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~---~~l~~~~~~~ 164 (864)
+-+..+. +++ +.|-+|+. ..+.||||||..|+.|.|+.... ..+.. ..+.+.++.+
T Consensus 105 eIMSsLN------------------HPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer-~~LsErEaRhfFRQIvSA 165 (668)
T KOG0611|consen 105 EIMSSLN------------------HPHIIQIYEVFENKDKIVIVMEYASGGELYDYISER-GSLSEREARHFFRQIVSA 165 (668)
T ss_pred HHHhhcC------------------CCceeehhhhhcCCceEEEEEEecCCccHHHHHHHh-ccccHHHHHHHHHHHHHH
Confidence 4333332 222 34555665 67889999999999999986533 22322 2333334333
Q ss_pred HHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 165 YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 165 ~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|.++++|||||-+|||++.+ +.++|.|||++..+.
T Consensus 166 -VhYCHknrVvHRDLKLENILLD~N--~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 166 -VHYCHKNRVVHRDLKLENILLDQN--NNIKIADFGLSNLYA 204 (668)
T ss_pred -HHHHhhccceecccchhheeecCC--CCeeeeccchhhhhc
Confidence 567799999999999999999965 899999999987554
|
|
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.3e-11 Score=132.06 Aligned_cols=142 Identities=20% Similarity=0.222 Sum_probs=98.1
Q ss_pred ccccccccceeeEEEEec----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 10 ETPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
.+.||.|++|.||+|+++ +...||||+.++....... -+|
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~------------------------------------~~~ 52 (266)
T cd05033 9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQR------------------------------------LDF 52 (266)
T ss_pred eeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHH------------------------------------HHH
Confidence 378999999999999975 2457999988765432211 113
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
..|...+.++.+. .-+.+...+. ....+++|||++|.+|.++............+...+.++
T Consensus 53 ~~e~~~l~~l~h~-----------------~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l 115 (266)
T cd05033 53 LTEASIMGQFDHP-----------------NIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGI 115 (266)
T ss_pred HHHHHHHHhCCCC-----------------CcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHH
Confidence 3455555444221 0112222222 456789999999999988765433345666665555554
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 116 ~~~l~~Lh~~~i~H~di~p~nili~~~--~~~~l~dfg~~~~~~ 157 (266)
T cd05033 116 ASGMKYLSEMNYVHRDLAARNILVNSN--LVCKVSDFGLSRRLE 157 (266)
T ss_pred HHHHHHHHhCCcccCCCCcceEEEcCC--CCEEECccchhhccc
Confidence 4 788999999999999999999865 889999999988774
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.30 E-value=8.6e-12 Score=151.20 Aligned_cols=142 Identities=18% Similarity=0.246 Sum_probs=93.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.. +|+.||||+.+..... + ..... .+..|.
T Consensus 10 ~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~----~------------------------~~~~~------~~~~E~ 55 (669)
T cd05610 10 KPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMI----N------------------------KNMVH------QVQAER 55 (669)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEehhhcc----C------------------------HHHHH------HHHHHH
Confidence 78999999999999986 7999999987632100 0 00000 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+..+++. ..+.+...+. ....+|||||++|.+|.++.... ..+....+...+.+++ +
T Consensus 56 ~~l~~l~hp-----------------~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~-~~l~~~~~~~i~~qil~aL 117 (669)
T cd05610 56 DALALSKSP-----------------FIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIY-GYFDEEMAVKYISEVALAL 117 (669)
T ss_pred HHHHhcCCC-----------------CcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence 333333221 0111222222 45688999999999998875422 2234444444333333 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+|..||+|+||||.|||++.+ +.++|+|||+++...
T Consensus 118 ~yLH~~gIiHrDLKP~NILl~~~--g~vkL~DFGls~~~~ 155 (669)
T cd05610 118 DYLHRHGIIHRDLKPDNMLISNE--GHIKLTDFGLSKVTL 155 (669)
T ss_pred HHHHhCCEEeCCccHHHEEEcCC--CCEEEEeCCCCcccc
Confidence 88999999999999999999865 899999999988654
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.3e-11 Score=133.73 Aligned_cols=141 Identities=21% Similarity=0.224 Sum_probs=95.1
Q ss_pred cccccccceeeEEEEe-----cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l-----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.|++|++|.||+|+. .+++.||||..++........ ++
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~------------------------------------~~ 53 (284)
T cd05079 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA------------------------------------DL 53 (284)
T ss_pred eecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHH------------------------------------HH
Confidence 4599999999999984 258899999877653221110 13
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-c--CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
.+|...++++.+. .-+.+..... . ...+|||||++|.+|.++........+...+...+.
T Consensus 54 ~~e~~~l~~l~h~-----------------~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~ 116 (284)
T cd05079 54 KKEIEILRNLYHE-----------------NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAV 116 (284)
T ss_pred HHHHHHHHhCCCC-----------------CeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHH
Confidence 4455555544221 0122222222 1 346799999999999887543222345555555444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 117 ~i~~aL~~lH~~gi~H~dlkp~Nil~~~~--~~~~l~dfg~~~~~~ 160 (284)
T cd05079 117 QICKGMDYLGSRQYVHRDLAARNVLVESE--HQVKIGDFGLTKAIE 160 (284)
T ss_pred HHHHHHHHHHHCCeeecccchheEEEcCC--CCEEECCCccccccc
Confidence 443 788999999999999999999865 889999999988664
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.30 E-value=5e-12 Score=143.88 Aligned_cols=140 Identities=16% Similarity=0.215 Sum_probs=96.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
..||.||||.|+.|.++ +++.+|||+++.+.--+ +.|++- ...|.
T Consensus 374 ~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~-~d~Ve~---------------------------------~~~Ek 419 (694)
T KOG0694|consen 374 AVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQ-RDEVES---------------------------------LMCEK 419 (694)
T ss_pred EEeccCcCceEEEEEEcCCCcEEEEEEeeccceec-cccHHH---------------------------------HHHHH
Confidence 67999999999999988 78999999998654210 111111 12244
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+-++...+ +..+-.++. .++.+.||||+.|+++..+.........+.++...-+-+.
T Consensus 420 rI~~la~~-------------------HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~ 480 (694)
T KOG0694|consen 420 RIFELANR-------------------HPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLG 480 (694)
T ss_pred HHHHHhcc-------------------CCeEeecccccccCCeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHH
Confidence 43333221 122334443 3556799999999997766432322223344444445555
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
|+.+|++|||+||+|-.|||++.+ |.++|+||||+++.
T Consensus 481 L~fLH~~~IIYRDlKLdNiLLD~e--Gh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 481 LQFLHENGIIYRDLKLDNLLLDTE--GHVKIADFGLCKEG 518 (694)
T ss_pred HHHHHhcCceeeecchhheEEccc--CcEEeccccccccc
Confidence 999999999999999999999976 99999999999864
|
|
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.3e-11 Score=133.12 Aligned_cols=146 Identities=14% Similarity=0.147 Sum_probs=100.3
Q ss_pred ccccccccccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhH
Q 002927 2 GGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 80 (864)
Q Consensus 2 ~~~F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~ 80 (864)
+++|..+ +.||+|++|.||+|... +|+.||||+.........
T Consensus 3 ~~~~~~~--~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~----------------------------------- 45 (277)
T cd06641 3 EELFTKL--EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDE----------------------------------- 45 (277)
T ss_pred HHhhhhh--eeEeecCCeEEEEEEECCCCcEEEEEEeccccchHH-----------------------------------
Confidence 4666655 45999999999999975 789999997643211100
Q ss_pred hhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHH
Q 002927 81 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 158 (864)
Q Consensus 81 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~ 158 (864)
.-++.+|.+.+.++.+ +. +.+...+. ....++||||++|.+|.++.. ....+...+.
T Consensus 46 -~~~~~~e~~~l~~l~h------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~--~~~~~~~~~~ 104 (277)
T cd06641 46 -IEDIQQEITVLSQCDS------------------PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE--PGPLDETQIA 104 (277)
T ss_pred -HHHHHHHHHHHHhcCC------------------CCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHh--cCCCCHHHHH
Confidence 0124445555554422 11 22222222 566899999999999887643 3345556555
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+.+++ +..+|..|++|+|++|+||+++.+ +.++|+|||++..+..
T Consensus 105 ~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~--~~~~l~dfg~~~~~~~ 153 (277)
T cd06641 105 TILREILKGLDYLHSEKKIHRDIKAANVLLSEH--GEVKLADFGVAGQLTD 153 (277)
T ss_pred HHHHHHHHHHHHHccCCeecCCCCHHhEEECCC--CCEEEeecccceeccc
Confidence 5555544 778899999999999999999865 8899999999887654
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.1e-11 Score=131.94 Aligned_cols=138 Identities=21% Similarity=0.213 Sum_probs=95.5
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||.|++|.||+|+.+++..||+|..+.+-. .+-+|.+|+.
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~--------------------------------------~~~~~~~e~~ 51 (256)
T cd05114 10 KELGSGQFGVVHLGKWRAQIKVAIKAINEGAM--------------------------------------SEEDFIEEAK 51 (256)
T ss_pred eEecCCcCceEEEEEeccCceEEEEecccCCc--------------------------------------cHHHHHHHHH
Confidence 56999999999999988888999997553211 0112445665
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
.+.++.+ +. +.+...+. ....++||||++|.+|.+.........+...+...+.+++ +
T Consensus 52 ~l~~l~h------------------~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l 113 (256)
T cd05114 52 VMMKLSH------------------PKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGM 113 (256)
T ss_pred HHHHCCC------------------CCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHH
Confidence 5555432 11 11222222 4567899999999999877543222345554444444443 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 114 ~~lH~~~i~H~dl~p~ni~i~~~--~~~kl~d~g~~~~~~ 151 (256)
T cd05114 114 EYLERNSFIHRDLAARNCLVSST--GVVKVSDFGMTRYVL 151 (256)
T ss_pred HHHHHCCccccccCcceEEEcCC--CeEEECCCCCccccC
Confidence 78999999999999999999865 889999999887654
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.30 E-value=7.3e-12 Score=133.40 Aligned_cols=136 Identities=19% Similarity=0.228 Sum_probs=94.9
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.|+.|++|.||+|+.++++.+|||+.+++... +-+|.+|..
T Consensus 10 ~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05059 10 KELGSGQFGVVHLGKWRGKIDVAIKMIREGAMS--------------------------------------EDDFIEEAK 51 (256)
T ss_pred hhhccCCCceEEEeEecCCccEEEEEeccCCCC--------------------------------------HHHHHHHHH
Confidence 679999999999999887789999986543210 001333444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.+.++.+ + .+.+++. ....+++|||++|.+|.++........+...+...+.+++
T Consensus 52 ~l~~l~~------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~ 111 (256)
T cd05059 52 VMMKLSH------------------P--NLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCE 111 (256)
T ss_pred HHHhCCC------------------C--CEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 4444321 2 2333432 4567899999999999887543333345555544444443
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 112 ~l~~lH~~~i~H~dl~p~ni~i~~~--~~~kl~dfg~~~~~~ 151 (256)
T cd05059 112 AMEYLESNGFIHRDLAARNCLVGED--NVVKVSDFGLARYVL 151 (256)
T ss_pred HHHHHHHCCcccccccHhhEEECCC--CcEEECCcccceecc
Confidence 678899999999999999999865 899999999987653
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.4e-11 Score=133.37 Aligned_cols=138 Identities=20% Similarity=0.239 Sum_probs=94.9
Q ss_pred cccccccceeeEEEEec-----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV-----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||+|++|.||+|+.+ +|+.||||+.+....... -.+
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~-------------------------------------~~~ 52 (284)
T cd05081 10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHL-------------------------------------RDF 52 (284)
T ss_pred eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHH-------------------------------------HHH
Confidence 67999999999999842 689999998664432110 013
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 159 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~ 159 (864)
.+|++.+.++.+ ++ |++++. ....+|||||++|.+|.++........+...+..
T Consensus 53 ~~e~~~l~~l~h------------------~~--iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~ 112 (284)
T cd05081 53 EREIEILKSLQH------------------DN--IVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLL 112 (284)
T ss_pred HHHHHHHHhCCC------------------CC--eeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHH
Confidence 345555444422 22 222221 2346799999999999987543223345555544
Q ss_pred HHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 160 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 160 ~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 113 ~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~--~~~~l~dfg~~~~~~~ 160 (284)
T cd05081 113 YASQICKGMEYLGSKRYVHRDLATRNILVESE--NRVKIGDFGLTKVLPQ 160 (284)
T ss_pred HHHHHHHHHHHHHHCCceeccCCHhhEEECCC--CeEEECCCcccccccC
Confidence 444444 778999999999999999999865 8999999999887654
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.1e-11 Score=144.74 Aligned_cols=138 Identities=18% Similarity=0.125 Sum_probs=94.6
Q ss_pred cccccccceeeEEEEec-C-CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATLV-D-GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~-G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+.||.|++|.||+|... + ++.||+|......... ...+.+|
T Consensus 73 ~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~-------------------------------------~~~~~~E 115 (478)
T PTZ00267 73 TLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQ-------------------------------------AAYARSE 115 (478)
T ss_pred EEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHH-------------------------------------HHHHHHH
Confidence 57999999999999865 4 7889999643221110 0012345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHh---hcCCCHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEI 161 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l~~~~ 161 (864)
++.+.++.| ..|++++. ....+|||||++|++|.+..... ...+....+...+
T Consensus 116 ~~~l~~l~H--------------------pniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~ 175 (478)
T PTZ00267 116 LHCLAACDH--------------------FGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLF 175 (478)
T ss_pred HHHHHhCCC--------------------CCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHH
Confidence 555554432 22444442 56789999999999998764321 1234444444444
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++..+..
T Consensus 176 ~qi~~aL~~lH~~~ivHrDlkp~NIll~~~--~~~kL~DFgla~~~~~ 221 (478)
T PTZ00267 176 YQIVLALDEVHSRKMMHRDLKSANIFLMPT--GIIKLGDFGFSKQYSD 221 (478)
T ss_pred HHHHHHHHHHHhCCEEECCcCHHhEEECCC--CcEEEEeCcCceecCC
Confidence 4433 788999999999999999999865 8999999999987754
|
|
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.29 E-value=8.2e-12 Score=132.74 Aligned_cols=136 Identities=19% Similarity=0.232 Sum_probs=95.7
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|+||+|...+++.+|||+.+.+... +-+|.+|.+
T Consensus 10 ~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05112 10 QEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS--------------------------------------EEDFIEEAQ 51 (256)
T ss_pred eeecCcccceEEEEEEeCCCeEEEEECCCCCCC--------------------------------------HHHHHHHHH
Confidence 679999999999999877889999987643211 112445665
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.+.++.+ + .+.+++. ....+++|||++|.+|.+.............+...+.+++
T Consensus 52 ~l~~l~~------------------~--~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~ 111 (256)
T cd05112 52 VMMKLSH------------------P--KLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCE 111 (256)
T ss_pred HHHhCCC------------------C--CeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHH
Confidence 5555422 1 2233332 5668899999999999877543322344444444444433
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|+.|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 112 ~l~~lH~~~i~h~dl~p~ni~i~~~--~~~~l~d~g~~~~~~ 151 (256)
T cd05112 112 GMAYLESSNVIHRDLAARNCLVGEN--QVVKVSDFGMTRFVL 151 (256)
T ss_pred HHHHHHHCCccccccccceEEEcCC--CeEEECCCcceeecc
Confidence 678899999999999999999854 789999999987653
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.5e-11 Score=131.84 Aligned_cols=142 Identities=20% Similarity=0.256 Sum_probs=96.1
Q ss_pred ccccccccceeeEEEEec-CCC---EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 10 ETPLATASIAQVHRATLV-DGR---QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~---~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
.+.||+|++|+||+|+++ +|+ .||||..++........ ++
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~------------------------------------~~ 53 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQ------------------------------------DF 53 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHH------------------------------------HH
Confidence 378999999999999986 444 79999876653221110 13
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 163 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~ 163 (864)
..|++.+.++.+ +. +.+...+. ....+|+|||++|.+|.++............+...+.+
T Consensus 54 ~~e~~~l~~l~h------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 115 (268)
T cd05063 54 LSEASIMGQFSH------------------HNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRG 115 (268)
T ss_pred HHHHHHHhcCCC------------------CCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHH
Confidence 345544444321 11 22222222 45678999999999998875433233455555554444
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 116 l~~al~~lH~~~i~H~dlkp~Nili~~~--~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 116 IAAGMKYLSDMNYVHRDLAARNILVNSN--LECKVSDFGLSRVLED 159 (268)
T ss_pred HHHHHHHHHHCCeeccccchhhEEEcCC--CcEEECCCccceeccc
Confidence 43 788999999999999999999865 8899999999876643
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.4e-11 Score=131.40 Aligned_cols=139 Identities=19% Similarity=0.220 Sum_probs=97.3
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|..++++.||||+.+...... -++.+|..
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~--------------------------------------~~~~~E~~ 53 (260)
T cd05067 12 KKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSP--------------------------------------EAFLAEAN 53 (260)
T ss_pred eeeccCccceEEeeecCCCceEEEEEecCCCCcH--------------------------------------HHHHHHHH
Confidence 5699999999999998899999999876432210 02344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--HH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~--l~ 167 (864)
.+.++.+. .-+.+..++.....+++|||++|.+|.+...... ...+...+...+.+++ +.
T Consensus 54 ~l~~l~h~-----------------~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~ 116 (260)
T cd05067 54 LMKQLQHP-----------------RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMA 116 (260)
T ss_pred HHHhcCCc-----------------CeeeEEEEEccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 55554321 0122223333556799999999999988754221 2344455554444444 78
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+|..|++|+|+||.||+++.+ +.+.|+|||++..+.
T Consensus 117 ~LH~~~i~H~dl~p~ni~i~~~--~~~~l~dfg~~~~~~ 153 (260)
T cd05067 117 FIERKNYIHRDLRAANILVSET--LCCKIADFGLARLIE 153 (260)
T ss_pred HHhcCCeecccccHHhEEEcCC--CCEEEccCcceeecC
Confidence 8999999999999999999865 889999999987765
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.29 E-value=2e-11 Score=129.34 Aligned_cols=138 Identities=17% Similarity=0.212 Sum_probs=95.4
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||.|++|.||+|...+|+.||||+.+....... .-.+..|.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~------------------------------------~~~~~~e~~ 44 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDL------------------------------------KRKFLQEAE 44 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHH------------------------------------HHHHHHHHH
Confidence 46899999999999987799999997654322100 001334544
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.++++. ++. +++++ . ....++||||++|.+|.++........+...+...+.++.
T Consensus 45 ~l~~l~------------------~~~--i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 104 (251)
T cd05041 45 ILKQYD------------------HPN--IVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAA 104 (251)
T ss_pred HHHhCC------------------CCC--eEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 444432 122 23332 2 5678999999999999887543333345555555444443
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|+.|++|+|++|.||+++.+ ++++|+|||++....
T Consensus 105 ~l~~lH~~~i~h~di~p~nili~~~--~~~~l~d~g~~~~~~ 144 (251)
T cd05041 105 GMEYLESKNCIHRDLAARNCLVGEN--NVLKISDFGMSREEE 144 (251)
T ss_pred HHHHHHhCCEehhhcCcceEEEcCC--CcEEEeecccccccc
Confidence 778899999999999999999865 899999999987654
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.8e-11 Score=133.25 Aligned_cols=139 Identities=17% Similarity=0.166 Sum_probs=94.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|+.. +|+.|++|+......+.. -++..|.
T Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~-------------------------------------~~~~~e~ 60 (292)
T cd06644 18 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL-------------------------------------EDYMVEI 60 (292)
T ss_pred heecCCCCeEEEEEEECCCCceEEEEEeccCCHHHH-------------------------------------HHHHHHH
Confidence 45999999999999976 699999998764322110 0133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+-..+. ....++||||++|.++...........+...+...+.+++ +
T Consensus 61 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l 123 (292)
T cd06644 61 EILATCNHP-----------------YIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEAL 123 (292)
T ss_pred HHHHhCCCC-----------------cEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence 555444321 0122222222 5678999999999998766432233455555555444443 6
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+|..|++|+|+||.||+++.+ ++++|+|||++...
T Consensus 124 ~~lH~~~i~H~dlkp~Nili~~~--~~~kl~dfg~~~~~ 160 (292)
T cd06644 124 QYLHSMKIIHRDLKAGNVLLTLD--GDIKLADFGVSAKN 160 (292)
T ss_pred HHHhcCCeeecCCCcceEEEcCC--CCEEEccCccceec
Confidence 78899999999999999999854 89999999987654
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.29 E-value=1e-11 Score=132.49 Aligned_cols=136 Identities=18% Similarity=0.181 Sum_probs=95.9
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||.|+..++..||||..+.+-.. +-+|.+|..
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05113 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--------------------------------------EDEFIEEAK 51 (256)
T ss_pred eEecCcccceEEEEEecCCCcEEEEEcCCCccc--------------------------------------HHHHHHHHH
Confidence 569999999999999877778999976543110 011344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.+.++.+ ..|.+++. ....+++|||+.|.+|.+.............+...+.++.
T Consensus 52 ~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~ 111 (256)
T cd05113 52 VMMKLSH--------------------EKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCE 111 (256)
T ss_pred HHhcCCC--------------------CCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 5544422 13344443 3457899999999999887543233455555555555544
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||+||+++.+ ++++|+|||++..+.
T Consensus 112 ~l~~lH~~~i~H~dl~p~nili~~~--~~~kl~d~g~~~~~~ 151 (256)
T cd05113 112 GMAYLESKQFIHRDLAARNCLVDDQ--GCVKVSDFGLSRYVL 151 (256)
T ss_pred HHHHHHhCCeeccccCcceEEEcCC--CCEEECCCccceecC
Confidence 778899999999999999999865 899999999987653
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.5e-11 Score=131.68 Aligned_cols=140 Identities=18% Similarity=0.192 Sum_probs=95.3
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.|+.|++|.||+|+..+...||||+.++.... +-+|.+|..
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~--------------------------------------~~~~~~E~~ 53 (262)
T cd05071 12 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--------------------------------------PEAFLQEAQ 53 (262)
T ss_pred eecCCCCCCcEEEEEecCCceEEEEecccCccC--------------------------------------HHHHHHHHH
Confidence 569999999999999876678999987642110 002445666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--HH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~--l~ 167 (864)
.+.++.+. .-+.+...+.....+++|||++|.+|.++..... ...+...+...+.+++ +.
T Consensus 54 ~l~~l~~~-----------------~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~ 116 (262)
T cd05071 54 VMKKLRHE-----------------KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 116 (262)
T ss_pred HHHhCCCC-----------------CcceEEEEECCCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHH
Confidence 65554321 0112222223456789999999999988754221 2234444444444443 67
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+|..|++|+|+||+||+++.+ +.++|+|||.+..+..
T Consensus 117 ~lH~~~i~H~dl~p~Nill~~~--~~~~L~dfg~~~~~~~ 154 (262)
T cd05071 117 YVERMNYVHRDLRAANILVGEN--LVCKVADFGLARLIED 154 (262)
T ss_pred HHHHCCccccccCcccEEEcCC--CcEEeccCCceeeccc
Confidence 8999999999999999999865 8899999999887654
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.5e-11 Score=133.61 Aligned_cols=143 Identities=15% Similarity=0.127 Sum_probs=94.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|+||+|..+ +|+.||||...+....... .+-.+.+|.
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~----------------------------------~~~~~~~E~ 51 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK----------------------------------GESMALNEK 51 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchH----------------------------------HHHHHHHHH
Confidence 56999999999999976 7999999976543211000 000123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~~-- 165 (864)
..+.++.+. ..+.+...+. ....++||||++|.+|.+..... ..++....+...+.+++
T Consensus 52 ~il~~l~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~ 114 (285)
T cd05630 52 QILEKVNSR-----------------FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCG 114 (285)
T ss_pred HHHHhCCCC-----------------CeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHH
Confidence 544444221 1122222222 45578999999999998765322 22345555555444443
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 115 l~~lH~~~iiH~dikp~Nil~~~~--~~~~l~Dfg~~~~~~ 153 (285)
T cd05630 115 LEDLHQERIVYRDLKPENILLDDH--GHIRISDLGLAVHVP 153 (285)
T ss_pred HHHHHhCCEEeCCCCHHHEEECCC--CCEEEeeccceeecC
Confidence 678899999999999999999865 889999999987654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.1e-11 Score=133.77 Aligned_cols=143 Identities=15% Similarity=0.186 Sum_probs=98.8
Q ss_pred cccccccccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 3 GMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 3 ~~F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
+.|..+ +.|++|++|+||+|+.+ +++.||||+........ .
T Consensus 4 ~~y~~~--~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~ 45 (277)
T cd06640 4 ELFTKL--ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAED------------------------------------E 45 (277)
T ss_pred Hhhhhh--hhcccCCCeEEEEEEEccCCEEEEEEEEeccccHH------------------------------------H
Confidence 344444 56999999999999976 68999999865321110 0
Q ss_pred hccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHH
Q 002927 82 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKV 157 (864)
Q Consensus 82 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l 157 (864)
.-++.+|+..+.++.+ -.+++++. ....+|||||++|.+|.+... ....+...+
T Consensus 46 ~~~~~~e~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~--~~~l~~~~~ 103 (277)
T cd06640 46 IEDIQQEITVLSQCDS--------------------PYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLR--AGPFDEFQI 103 (277)
T ss_pred HHHHHHHHHHHHhCCC--------------------CCEeeEEEEEEECCEEEEEEecCCCCcHHHHHh--cCCCCHHHH
Confidence 1123445554444322 12333332 466899999999999987643 334555555
Q ss_pred HHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 158 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 158 ~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
...+.+++ +..+|..|++|+|++|+||+++.+ ++++|+|||++..+..
T Consensus 104 ~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~--~~~~l~dfg~~~~~~~ 153 (277)
T cd06640 104 ATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQ--GDVKLADFGVAGQLTD 153 (277)
T ss_pred HHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCC--CCEEEcccccceeccC
Confidence 55544444 778899999999999999999865 8999999999877654
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.4e-12 Score=131.16 Aligned_cols=157 Identities=19% Similarity=0.215 Sum_probs=105.9
Q ss_pred cccc-ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 6 MDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 6 ~~fd-~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
++|| .+|||.|-||+||.|+.+ ++-.||+||.... ++ .......++++|+
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKs---qi-------------------------~~~~v~~qlrREi 73 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKS---QI-------------------------LKTQVEHQLRREI 73 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHH---HH-------------------------HHhcchhhhhhee
Confidence 4566 489999999999999976 8999999996421 11 0122334455555
Q ss_pred cHHHHHH--HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhc-CCCHHHHHH-
Q 002927 84 DFNSEAE--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVE- 159 (864)
Q Consensus 84 d~~~Ea~--n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~~~~~l~~- 159 (864)
....-.+ |+-|+...|- .+.+.+|++||..++.+...+..... .++....+.
T Consensus 74 EIqs~L~hpnilrlY~~fh------------------------d~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Y 129 (281)
T KOG0580|consen 74 EIQSHLRHPNILRLYGYFH------------------------DSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATY 129 (281)
T ss_pred EeecccCCccHHhhhhhee------------------------ccceeEEEEEecCCchHHHHHHhcccccccccchhHH
Confidence 4433332 4444444332 14556799999988887765442222 244333333
Q ss_pred --HHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHH
Q 002927 160 --EITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMF 217 (864)
Q Consensus 160 --~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~ 217 (864)
.++.+ +..+|..+++|||+||+|+|+..+ |.+++.|||-+..-+...|..+|..+
T Consensus 130 i~q~A~A-l~y~h~k~VIhRdiKpenlLlg~~--~~lkiAdfGwsV~~p~~kR~tlcgt~ 186 (281)
T KOG0580|consen 130 IKQLANA-LLYCHLKRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSNKRKTLCGTL 186 (281)
T ss_pred HHHHHHH-HHHhccCCcccCCCCHHHhccCCC--CCeeccCCCceeecCCCCceeeeccc
Confidence 33333 567799999999999999999976 89999999988877777777776544
|
|
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.1e-11 Score=138.32 Aligned_cols=76 Identities=26% Similarity=0.387 Sum_probs=56.9
Q ss_pred CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 127 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
...+++||++ |.+|.++.. ...+....+...+.+++ +..+|..|++|||+||+||+++.+ +.++|+|||++..
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~--~~~kl~Dfg~~~~ 167 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVK--CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNED--CELRILDFGLARQ 167 (343)
T ss_pred CcEEEEeecC-CCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCC--CCEEEcCCcccee
Confidence 3457999988 667766532 23455555555444444 778999999999999999999865 8999999999887
Q ss_pred cCh
Q 002927 205 LSS 207 (864)
Q Consensus 205 l~~ 207 (864)
+..
T Consensus 168 ~~~ 170 (343)
T cd07878 168 ADD 170 (343)
T ss_pred cCC
Confidence 654
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.28 E-value=6.5e-12 Score=135.47 Aligned_cols=143 Identities=15% Similarity=0.188 Sum_probs=95.7
Q ss_pred cccccccccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 3 GMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 3 ~~F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
+.|..+ +.|++|++|.||+|.+. +|+.||||+...........
T Consensus 4 ~~y~~~--~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~---------------------------------- 47 (277)
T cd06642 4 ELFTKL--ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIE---------------------------------- 47 (277)
T ss_pred HHHHHH--HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHH----------------------------------
Confidence 445544 56999999999999975 78999999865332111100
Q ss_pred hccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHH
Q 002927 82 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKV 157 (864)
Q Consensus 82 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l 157 (864)
++.+|++.+.++.+ -.|++++ . ....+|||||++|.+|.+... ........+
T Consensus 48 --~~~~e~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~ 103 (277)
T cd06642 48 --DIQQEITVLSQCDS--------------------PYITRYYGSYLKGTKLWIIMEYLGGGSALDLLK--PGPLEETYI 103 (277)
T ss_pred --HHHHHHHHHHcCCC--------------------CccHhhhcccccCCceEEEEEccCCCcHHHHhh--cCCCCHHHH
Confidence 13334444444321 1122222 1 455789999999999877643 333444444
Q ss_pred HHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 158 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 158 ~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 104 ~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~--~~~~l~dfg~~~~~~~ 153 (277)
T cd06642 104 ATILREILKGLDYLHSERKIHRDIKAANVLLSEQ--GDVKLADFGVAGQLTD 153 (277)
T ss_pred HHHHHHHHHHHHHHhcCCeeccCCChheEEEeCC--CCEEEccccccccccC
Confidence 44444433 678899999999999999999865 8999999999887764
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.1e-11 Score=136.98 Aligned_cols=137 Identities=18% Similarity=0.228 Sum_probs=87.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.......... ...+.+|.
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------------------------~~~~~~E~ 71 (359)
T cd07876 27 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTH-----------------------------------AKRAYREL 71 (359)
T ss_pred EEeecCCCEEEEEEEEcCCCceeEEEEecccccchhH-----------------------------------HHHHHHHH
Confidence 78999999999999975 7999999987533211100 00122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
..+..+.+. .-+.+..++. ....++||||++|... +.. ....+...+...+.
T Consensus 72 ~~l~~l~h~-----------------niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~-~~~---~~~~~~~~~~~~~~ 130 (359)
T cd07876 72 VLLKCVNHK-----------------NIISLLNVFTPQKSLEEFQDVYLVMELMDANLC-QVI---HMELDHERMSYLLY 130 (359)
T ss_pred HHHHhCCCC-----------------CEeeeeeeeccCCCccccceeEEEEeCCCcCHH-HHH---hccCCHHHHHHHHH
Confidence 444333220 0122222221 1235899999987432 221 22345555544444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+++ +..+|..|++|||+||+||+++.+ +.++|+|||++...
T Consensus 131 qi~~~L~~LH~~~ivHrDlkp~NIl~~~~--~~~kl~Dfg~a~~~ 173 (359)
T cd07876 131 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTA 173 (359)
T ss_pred HHHHHHHHHHhCCcccCCCCHHHEEECCC--CCEEEecCCCcccc
Confidence 443 788999999999999999999865 89999999998654
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.1e-11 Score=129.34 Aligned_cols=140 Identities=19% Similarity=0.233 Sum_probs=100.0
Q ss_pred cccccccceeeEEEEec-C---CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV-D---GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~---G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||.|++|.||+|+.. + +..|+||+.+........ -++.
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~ 44 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEER------------------------------------KDFL 44 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHH------------------------------------HHHH
Confidence 46899999999999976 3 889999988765432200 0133
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHh--------hcCCCH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE--------AFGVNK 154 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~--------~~~~~~ 154 (864)
+|.+.+.++.+ ..+.+++ . ....+++|||++|.+|.++.... ....+.
T Consensus 45 ~e~~~l~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 104 (262)
T cd00192 45 KEARVMKKLGH--------------------PNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSL 104 (262)
T ss_pred HHHHHHhhcCC--------------------CChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCH
Confidence 45555555432 1122232 2 45678999999999999886543 244566
Q ss_pred HHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 155 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 155 ~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
..+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+...
T Consensus 105 ~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~--~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 105 KDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGED--LVVKISDFGLSRDVYDD 158 (262)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCC--CcEEEcccccccccccc
Confidence 66666555544 788999999999999999999865 89999999999877653
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.9e-12 Score=140.32 Aligned_cols=149 Identities=16% Similarity=0.235 Sum_probs=101.4
Q ss_pred cccccccccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 3 GMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 3 ~~F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
..|..+ +-||.||||.||+|... +++.||+||..-+..+....|+ .+
T Consensus 13 ~~~~~~--~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIedi------------------------------qq 60 (467)
T KOG0201|consen 13 LLYTKL--ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDI------------------------------QQ 60 (467)
T ss_pred cccccc--hhccccccceeeeeeeccccceEEEEEechhhcchhhHHH------------------------------HH
Confidence 456666 45999999999999965 8999999997643322211121 12
Q ss_pred hccHHHHHH--HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCC-CHHHHH
Q 002927 82 ELDFNSEAE--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGV-NKQKVV 158 (864)
Q Consensus 82 Eld~~~Ea~--n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~-~~~~l~ 158 (864)
|+.+..+.+ |+.+.... .++.+...++|||+.|+++.++++.. +. +...++
T Consensus 61 ei~~Ls~~~~~~it~yygs------------------------yl~g~~LwiiMey~~gGsv~~lL~~~--~~~~E~~i~ 114 (467)
T KOG0201|consen 61 EISVLSQCDSPNITEYYGS------------------------YLKGTKLWIIMEYCGGGSVLDLLKSG--NILDEFEIA 114 (467)
T ss_pred HHHHHHhcCcchHHhhhhh------------------------eeecccHHHHHHHhcCcchhhhhccC--CCCccceee
Confidence 333333322 22222221 11256677999999999999986532 33 444444
Q ss_pred HHHHHH--HHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHH
Q 002927 159 EEITRA--YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 211 (864)
Q Consensus 159 ~~~~~~--~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 211 (864)
-.+.+. .+..+|.++.+|||+|+.||++..+ |.++|.|||.+++++.....
T Consensus 115 ~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~--g~vkl~DfgVa~ql~~~~~r 167 (467)
T KOG0201|consen 115 VILREVLKGLDYLHSEKKIHRDIKAANILLSES--GDVKLADFGVAGQLTNTVKR 167 (467)
T ss_pred eehHHHHHHhhhhhhcceecccccccceeEecc--CcEEEEecceeeeeechhhc
Confidence 333333 3888999999999999999999976 89999999999999876554
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.28 E-value=6.6e-12 Score=139.87 Aligned_cols=138 Identities=17% Similarity=0.206 Sum_probs=108.7
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+-||+|-||.||.|++....+||||.++++.. .+-+|.+||.
T Consensus 212 ~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m--------------------------------------~~~~f~~Ea~ 253 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM--------------------------------------SPEAFLREAQ 253 (468)
T ss_pred HHhcCCccceEEEEEEcCCCcccceEEecccc--------------------------------------ChhHHHHHHH
Confidence 45999999999999996556999999888621 2234778999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cC---CceEEEeecCCcCCCChHHH-hhcCCCHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SS---ETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~---~~vLvmE~i~G~~L~~~~~~-~~~~~~~~~l~~~~~~~~ 165 (864)
-+.+++|. .+-++|. |+ ..+|||||++-++|.++++. ....+...+++....+++
T Consensus 254 iMk~L~H~--------------------~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIa 313 (468)
T KOG0197|consen 254 IMKKLRHE--------------------KLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIA 313 (468)
T ss_pred HHHhCccc--------------------CeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHH
Confidence 99988762 2334443 33 36899999999999999764 344566777887777777
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..|-+.++|||||-..||||+++ ..++|.||||++.+.++
T Consensus 314 eGM~YLes~~~IHRDLAARNiLV~~~--~~vKIsDFGLAr~~~d~ 356 (468)
T KOG0197|consen 314 EGMAYLESKNYIHRDLAARNILVDED--LVVKISDFGLARLIGDD 356 (468)
T ss_pred HHHHHHHhCCccchhhhhhheeeccC--ceEEEcccccccccCCC
Confidence 777889999999999999999976 78999999999965543
|
|
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.4e-11 Score=131.40 Aligned_cols=79 Identities=18% Similarity=0.160 Sum_probs=60.2
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....++||||++|.+|.+.... ...+....+...+.+++ +..+|+.|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 69 ~~~~~~v~e~~~g~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~--~~~kl~dfg~~~ 145 (278)
T cd05606 69 PDKLSFILDLMNGGDLHYHLSQ-HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH--GHVRISDLGLAC 145 (278)
T ss_pred CCEEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCC--CCEEEccCcCcc
Confidence 4557899999999999876432 22345555555444443 778899999999999999999865 899999999987
Q ss_pred ccCh
Q 002927 204 KLSS 207 (864)
Q Consensus 204 ~l~~ 207 (864)
.+..
T Consensus 146 ~~~~ 149 (278)
T cd05606 146 DFSK 149 (278)
T ss_pred ccCc
Confidence 6543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.8e-11 Score=131.16 Aligned_cols=138 Identities=14% Similarity=0.154 Sum_probs=94.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.+ +|+.||||+.+....... . .+.+|+
T Consensus 15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~----~---------------------------------~~~~e~ 57 (267)
T cd06646 15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDF----S---------------------------------LIQQEI 57 (267)
T ss_pred heeecCCCeEEEEEEECCCCeEEEEEEEecCccchH----H---------------------------------HHHHHH
Confidence 67999999999999975 799999999864322110 0 123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+.++.+ +. +.+...+. ....++||||++|.+|.++... ....+...+...+.++.
T Consensus 58 ~~l~~~~h------------------~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~ 118 (267)
T cd06646 58 FMVKECKH------------------CNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHV-TGPLSELQIAYVCRETLQG 118 (267)
T ss_pred HHHHhcCC------------------CCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHH
Confidence 44444322 11 11222222 4567899999999999887532 23345454444444433
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 119 l~~lH~~~i~H~dl~p~nill~~~--~~~~l~dfg~~~~~~ 157 (267)
T cd06646 119 LAYLHSKGKMHRDIKGANILLTDN--GDVKLADFGVAAKIT 157 (267)
T ss_pred HHHHHHCCccccCCCHHHEEECCC--CCEEECcCccceeec
Confidence 778899999999999999999865 889999999988764
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.6e-11 Score=143.82 Aligned_cols=76 Identities=17% Similarity=0.227 Sum_probs=58.4
Q ss_pred ceEEEeecCCcCCCChHHHhh---cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 129 TVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~~~---~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
.+|||||++|++|.+...... ..+....+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||+++
T Consensus 114 i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~--~~vkL~DFGls~ 191 (496)
T PTZ00283 114 IALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSN--GLVKLGDFGFSK 191 (496)
T ss_pred EEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCC--CCEEEEecccCe
Confidence 469999999999988754221 1244455555555444 788999999999999999999865 899999999987
Q ss_pred ccC
Q 002927 204 KLS 206 (864)
Q Consensus 204 ~l~ 206 (864)
.+.
T Consensus 192 ~~~ 194 (496)
T PTZ00283 192 MYA 194 (496)
T ss_pred ecc
Confidence 654
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.4e-11 Score=136.85 Aligned_cols=138 Identities=18% Similarity=0.241 Sum_probs=90.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+...... .....+.+|+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~~~E~ 50 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHV-----------------------------------SDATRILREI 50 (338)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEechhhccc-----------------------------------hhHHHHHHHH
Confidence 57999999999999976 79999999765321100 0011244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
+.+.++++ +. +.+..++. ....+|||||++| +|.++.. ....+....+...+.
T Consensus 51 ~~l~~l~h------------------pniv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~-~~~~~~~~~~~~i~~ 110 (338)
T cd07859 51 KLLRLLRH------------------PDIVEIKHIMLPPSRREFKDIYVVFELMES-DLHQVIK-ANDDLTPEHHQFFLY 110 (338)
T ss_pred HHHHhCCC------------------CCEeeecceEeccCCCCCceEEEEEecCCC-CHHHHHH-hcccCCHHHHHHHHH
Confidence 66655533 11 22222221 1235899999965 5555432 222344444444444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+++ +..+|+.|++|+|+||.|||++.+ +.++|+|||++...
T Consensus 111 qi~~aL~~LH~~~ivH~dlkp~NIll~~~--~~~kL~Dfg~~~~~ 153 (338)
T cd07859 111 QLLRALKYIHTANVFHRDLKPKNILANAD--CKLKICDFGLARVA 153 (338)
T ss_pred HHHHHHHHHHHCCeecCCCCHHHeEECCC--CcEEEccCcccccc
Confidence 433 788999999999999999999865 89999999998754
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.6e-11 Score=137.17 Aligned_cols=39 Identities=21% Similarity=0.313 Sum_probs=34.9
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|+.|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 192 l~~lH~~~i~H~dikp~Nil~~~~--~~~kl~dfg~~~~~~ 230 (343)
T cd05103 192 MEFLASRKCIHRDLAARNILLSEN--NVVKICDFGLARDIY 230 (343)
T ss_pred HHHHHhCCeecCCCccCeEEEcCC--CcEEEEecccccccc
Confidence 678899999999999999999865 899999999987653
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.6e-11 Score=129.74 Aligned_cols=141 Identities=13% Similarity=0.158 Sum_probs=94.8
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.|+.|++|+||+|...+|+.||||+.+......... .+.. -.+.+|+.
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~-------------------------~~~~------~~~~~e~~ 54 (265)
T cd06631 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAA-------------------------EKEY------EKLQEEVD 54 (265)
T ss_pred ceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhH-------------------------HHHH------HHHHHHHH
Confidence 6799999999999998789999999866432211000 0000 11444555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.++++++ + .+++++. ....+++|||++|.+|.++... ........+...+.++.
T Consensus 55 ~l~~l~~------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~ 113 (265)
T cd06631 55 LLKSLKH------------------V--NIVQYLGTCLDDNTISIFMEFVPGGSISSILNR-FGPLPEPVFCKYTKQILD 113 (265)
T ss_pred HHHhcCC------------------C--CEeeEeeEeecCCeEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 5555432 1 2233332 4567899999999999887542 22344444444333333
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+
T Consensus 114 ~l~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~ 152 (265)
T cd06631 114 GVAYLHNNCVVHRDIKGNNVMLMPN--GIIKLIDFGCARRL 152 (265)
T ss_pred HHHHHHhCCcccCCcCHHhEEECCC--CeEEeccchhhHhh
Confidence 778899999999999999999865 89999999987765
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.4e-11 Score=138.55 Aligned_cols=39 Identities=18% Similarity=0.288 Sum_probs=35.0
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+.
T Consensus 250 L~~LH~~~ivH~dikp~Nill~~~--~~~kL~DfGla~~~~ 288 (400)
T cd05105 250 MEFLASKNCVHRDLAARNVLLAQG--KIVKICDFGLARDIM 288 (400)
T ss_pred HHHHHhCCeeCCCCChHhEEEeCC--CEEEEEeCCcceecc
Confidence 778899999999999999999865 789999999987654
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.4e-11 Score=130.23 Aligned_cols=142 Identities=19% Similarity=0.208 Sum_probs=96.5
Q ss_pred cccccccceeeEEEEec-CC---CEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV-DG---RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G---~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.|++|.+|.||+|+.+ +| ..||||..++....... -+|.
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~ 53 (267)
T cd05066 10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQR------------------------------------RDFL 53 (267)
T ss_pred eeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHH------------------------------------HHHH
Confidence 67999999999999974 33 37999987654322110 0234
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+|...+.++.+ ..-+.+...+. ....+|+|||++|.+|.++............+...+.++.
T Consensus 54 ~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~ 116 (267)
T cd05066 54 SEASIMGQFDH-----------------PNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIA 116 (267)
T ss_pred HHHHHHHhCCC-----------------CCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 45555544422 11123333333 4567899999999999887653333345555555444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|+.|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 117 ~~l~~lH~~~i~h~dlkp~nili~~~--~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 117 SGMKYLSDMGYVHRDLAARNILVNSN--LVCKVSDFGLSRVLED 158 (267)
T ss_pred HHHHHHHHCCEeehhhchhcEEECCC--CeEEeCCCCccccccc
Confidence 678899999999999999999865 8999999999887653
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.7e-11 Score=131.50 Aligned_cols=136 Identities=16% Similarity=0.163 Sum_probs=90.2
Q ss_pred ccccccceeeEEEEec---CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 12 PLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 12 plasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.||+|++|.||+|+.. ++..||+|..+...... .+.++.+|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~------------------------------------~~~~~~~E 45 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQ------------------------------------EQMKFLEE 45 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChH------------------------------------HHHHHHHH
Confidence 5899999999999864 35679999765432110 11235556
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhc----CCCHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF----GVNKQKVVEE 160 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~----~~~~~~l~~~ 160 (864)
...+.++.+ +. |.+++. ....++||||++|.+|.++...... ..+...+...
T Consensus 46 ~~~l~~l~h------------------~~--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~ 105 (269)
T cd05087 46 AQPYRSLQH------------------SN--LLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRM 105 (269)
T ss_pred HHHHHhCCC------------------CC--EeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHH
Confidence 665555432 22 233332 4567899999999999887542211 1222222233
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++...
T Consensus 106 ~~qi~~al~~lH~~~i~H~dlkp~nil~~~~--~~~kL~dfg~~~~~ 150 (269)
T cd05087 106 ACEIALGLLHLHKNNFIHSDLALRNCLLTAD--LTVKIGDYGLSHNK 150 (269)
T ss_pred HHHHHHHHHHHHHCCEeccccCcceEEEcCC--CcEEECCccccccc
Confidence 33322 678899999999999999999865 89999999988643
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.6e-11 Score=133.81 Aligned_cols=143 Identities=17% Similarity=0.143 Sum_probs=94.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|+||+|+.. +|+.||||+....-.... + ...++..|+
T Consensus 31 ~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~----------------------------~------~~~~~~~e~ 76 (317)
T cd06635 31 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSN----------------------------E------KWQDIIKEV 76 (317)
T ss_pred heeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCch----------------------------H------HHHHHHHHH
Confidence 67999999999999975 789999998653211100 0 001244455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.+. ..+.+...+. ....+|||||+.| ++.+.........+...+...+.+++ +
T Consensus 77 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l 138 (317)
T cd06635 77 KFLQRIKHP-----------------NSIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGL 138 (317)
T ss_pred HHHHhCCCC-----------------CEEEEEEEEeeCCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 555554321 1122222222 5667899999987 55555433333455555555444443 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|++|+||+++.+ +.++|+|||++.....
T Consensus 139 ~~lH~~~i~H~dL~p~Nil~~~~--~~~kl~dfg~~~~~~~ 177 (317)
T cd06635 139 AYLHSHNMIHRDIKAGNILLTEP--GQVKLADFGSASIASP 177 (317)
T ss_pred HHHHHCCcccCCCCcccEEECCC--CCEEEecCCCccccCC
Confidence 78899999999999999999865 8999999998876543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.2e-11 Score=129.58 Aligned_cols=142 Identities=20% Similarity=0.192 Sum_probs=95.5
Q ss_pred cccccccceeeEEEEecC--CC--EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLVD--GR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~--G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|++|.||+|...+ |+ .||||+.+++...... -+|.
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~~ 44 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIM------------------------------------DDFL 44 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHH------------------------------------HHHH
Confidence 468999999999999752 33 6999987765442100 1133
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY 165 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~ 165 (864)
+|.+.+.++++. .-+.+.........+++|||++|.+|.+...... ...+...+...+.++.
T Consensus 45 ~e~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~ 107 (257)
T cd05040 45 KEAAIMHSLDHE-----------------NLIRLYGVVLTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIA 107 (257)
T ss_pred HHHHHHhhcCCC-----------------CccceeEEEcCCeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHH
Confidence 455555554321 0122222222356789999999999988754322 2345555555444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 108 ~~L~~lH~~~i~H~di~p~nil~~~~--~~~kl~dfg~~~~~~~ 149 (257)
T cd05040 108 NGMRYLESKRFIHRDLAARNILLASD--DKVKIGDFGLMRALPQ 149 (257)
T ss_pred HHHHHHHhCCccccccCcccEEEecC--CEEEeccccccccccc
Confidence 778899999999999999999865 8999999999887654
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.9e-11 Score=130.36 Aligned_cols=137 Identities=17% Similarity=0.189 Sum_probs=95.9
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.|++|++|.||+|+..+++.||||+.+++.... -++.+|..
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~--------------------------------------~~~~~e~~ 53 (261)
T cd05034 12 RKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSP--------------------------------------EAFLQEAQ 53 (261)
T ss_pred eeeccCcceEEEEEEEcCCceEEEEEecCCccCH--------------------------------------HHHHHHHH
Confidence 6799999999999998888899999876532110 01334555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~ 165 (864)
.+.++.+ ..+++++. ....+++|||++|.+|.++..... .......+...+.+++
T Consensus 54 ~l~~l~h--------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~ 113 (261)
T cd05034 54 IMKKLRH--------------------DKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIA 113 (261)
T ss_pred HHhhCCC--------------------CCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHH
Confidence 5544422 12334432 356889999999999987754221 1234444444443333
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.||+++++ +.++|+|||++..+..
T Consensus 114 ~al~~lh~~~i~h~di~p~nili~~~--~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 114 EGMAYLESRNYIHRDLAARNILVGEN--LVCKIADFGLARLIED 155 (261)
T ss_pred HHHHHHHhCCcccCCcchheEEEcCC--CCEEECccccceeccc
Confidence 678899999999999999999865 8999999999887653
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.3e-11 Score=135.02 Aligned_cols=140 Identities=17% Similarity=0.157 Sum_probs=91.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +++.||+|..+....... ...+.+|.
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~E~ 55 (301)
T cd07873 12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGA------------------------------------PCTAIREV 55 (301)
T ss_pred eEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCc------------------------------------hhHHHHHH
Confidence 67999999999999976 789999998654321110 00122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+-..+. ....+|||||++| +|.+.........+...+...+.+++ +
T Consensus 56 ~~l~~l~h~-----------------nI~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL 117 (301)
T cd07873 56 SLLKDLKHA-----------------NIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGL 117 (301)
T ss_pred HHHHhcCCC-----------------CcceEEEEEecCCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 444444321 0122222222 4567899999986 55554332223345555555444443 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+|..|++|+|+||+||+++.+ +.++|+|||++....
T Consensus 118 ~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~dfg~~~~~~ 155 (301)
T cd07873 118 NYCHRRKVLHRDLKPQNLLINER--GELKLADFGLARAKS 155 (301)
T ss_pred HHHHhCCeeCCCCCHHHEEECCC--CcEEECcCcchhccC
Confidence 88999999999999999999865 899999999986543
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.27 E-value=1e-11 Score=134.70 Aligned_cols=77 Identities=22% Similarity=0.306 Sum_probs=56.8
Q ss_pred CCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 127 SETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
...+|+|||++| +|.++.... ..+.+...+...+.+++ +..+|..|++|+|+||.|||++.+ +.++|+|||++.
T Consensus 82 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~--~~~kl~Dfg~~~ 158 (290)
T cd07862 82 TKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS--GQIKLADFGLAR 158 (290)
T ss_pred CcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCC--CCEEEccccceE
Confidence 446899999986 565554321 22345555555444444 788999999999999999999865 899999999987
Q ss_pred ccC
Q 002927 204 KLS 206 (864)
Q Consensus 204 ~l~ 206 (864)
...
T Consensus 159 ~~~ 161 (290)
T cd07862 159 IYS 161 (290)
T ss_pred ecc
Confidence 654
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.7e-11 Score=131.68 Aligned_cols=144 Identities=17% Similarity=0.147 Sum_probs=97.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.. +++.||||+.++..... .+ ..-.+.+|+
T Consensus 7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~----~~------------------------------~~~~~~~e~ 52 (290)
T cd05580 7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVK----LK------------------------------QVEHVLNEK 52 (290)
T ss_pred EEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh----hh------------------------------HHHHHHHHH
Confidence 67999999999999976 79999999875321100 00 001134566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.+. .-+.+...+. ....+++|||++|.+|.+..... ..+....+...+.+++ +
T Consensus 53 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l 114 (290)
T cd05580 53 RILQSIRHP-----------------FLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLAL 114 (290)
T ss_pred HHHHhCCCC-----------------CccceeeEEEcCCeEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHH
Confidence 555554321 0122222333 45678999999999998775422 3345555544444433 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+...
T Consensus 115 ~~lH~~~i~H~dl~p~nili~~~--~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 115 EYLHSLDIVYRDLKPENLLLDSD--GYIKITDFGFAKRVKGR 154 (290)
T ss_pred HHHHHCCEecCCCCHHHEEECCC--CCEEEeeCCCccccCCC
Confidence 78899999999999999999865 89999999998876543
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.4e-11 Score=128.50 Aligned_cols=137 Identities=19% Similarity=0.218 Sum_probs=95.7
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|...+++.||||...+.-... -.+.+|+.
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~--------------------------------------~~~~~e~~ 53 (261)
T cd05072 12 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSV--------------------------------------QAFLEEAN 53 (261)
T ss_pred eecCCcCCceEEEEEecCCceEEEEEccCCchhH--------------------------------------HHHHHHHH
Confidence 6799999999999998888899999866532110 01334555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~ 165 (864)
.+.++.+ +. +.+++ . ....+|+|||++|.+|.++..... .......+...+.+++
T Consensus 54 ~l~~l~h------------------~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~ 113 (261)
T cd05072 54 LMKTLQH------------------DK--LVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA 113 (261)
T ss_pred HHHhCCC------------------CC--eeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 5554422 12 22232 2 456789999999999988754322 2234444444444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|.||+++.+ +.++|.|||++..+..
T Consensus 114 ~~l~~LH~~~i~H~dl~p~nili~~~--~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 114 EGMAYIERKNYIHRDLRAANVLVSES--LMCKIADFGLARVIED 155 (261)
T ss_pred HHHHHHHHCCeeccccchhhEEecCC--CcEEECCCccceecCC
Confidence 788999999999999999999865 8999999999987654
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.6e-11 Score=129.84 Aligned_cols=142 Identities=20% Similarity=0.171 Sum_probs=99.1
Q ss_pred cccccccceeeEEEEec-CCC----EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV-DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~----~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||+|++|+||+|+.+ +|+ .||+|+........ ....+
T Consensus 13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~------------------------------------~~~~~ 56 (279)
T cd05057 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPK------------------------------------ANKEI 56 (279)
T ss_pred ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHH------------------------------------HHHHH
Confidence 68999999999999975 454 58999765443210 01124
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
.+|+..+.++.+. .-+.+.....+...+++|||++|.+|.+.........+...+...+.++.
T Consensus 57 ~~e~~~l~~l~h~-----------------~i~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~ 119 (279)
T cd05057 57 LDEAYVMASVDHP-----------------HVVRLLGICLSSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIA 119 (279)
T ss_pred HHHHHHHHhCCCC-----------------CcceEEEEEecCceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 4566666655321 01222222225678899999999999887554333456666666555554
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 120 ~~l~~LH~~~i~H~di~p~nil~~~~--~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 120 KGMSYLEEKRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLDV 161 (279)
T ss_pred HHHHHHHhCCEEecccCcceEEEcCC--CeEEECCCcccccccC
Confidence 788999999999999999999865 8899999999887653
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.9e-11 Score=128.16 Aligned_cols=140 Identities=19% Similarity=0.227 Sum_probs=97.9
Q ss_pred cccccccceeeEEEEec-CC----CEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV-DG----RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G----~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||.|++|+||+|+.. ++ +.||+|+.++...... +-++
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~ 48 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQ------------------------------------IEEF 48 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHH------------------------------------HHHH
Confidence 67999999999999975 33 8999999876543210 0113
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcC-CCHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEE 160 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~-~~~~~l~~~ 160 (864)
..|.+.+.++.+ + .|.+++. ....+++|||++|.+|.++....... .....+...
T Consensus 49 ~~e~~~l~~l~~------------------~--~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ 108 (258)
T smart00219 49 LREARIMRKLDH------------------P--NIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSF 108 (258)
T ss_pred HHHHHHHHhcCC------------------C--chheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHH
Confidence 344444444421 1 1223332 46688999999999998876433322 566555555
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+.+++ +..+|..|++|+|++|+||+++.+ +.++|+|||++......
T Consensus 109 ~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~--~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 109 ALQIARGMEYLESKNFIHRDLAARNCLVGEN--LVVKISDFGLSRDLYDD 156 (258)
T ss_pred HHHHHHHHHHHhcCCeeecccccceEEEccC--CeEEEcccCCceecccc
Confidence 55444 778899999999999999999865 79999999998776543
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.4e-11 Score=128.38 Aligned_cols=144 Identities=15% Similarity=0.117 Sum_probs=94.4
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+.|++|++|+||+|... +|++||||+.+........ . . +-.++.+|
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~--~-----------------------~-------~~~~~~~e 54 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPET--K-----------------------K-------EVNALECE 54 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhh--H-----------------------H-------HHHHHHHH
Confidence 478999999999999975 7999999987643211100 0 0 00124456
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
++.+.++.+ +.+ .+...+. ....+++|||++|.+|.+..... ...........+.+++
T Consensus 55 ~~~l~~l~~------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~ 115 (263)
T cd06625 55 IQLLKNLQH------------------ERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAY-GALTETVTRKYTRQILE 115 (263)
T ss_pred HHHHHhCCC------------------CCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHh-CCCCHHHHHHHHHHHHH
Confidence 655555422 222 2222222 45678999999999998775422 2233333333333322
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||+||+++.+ ++++|+|||++..+.
T Consensus 116 ~l~~lH~~~i~H~dl~p~nilv~~~--~~~~l~dfg~~~~~~ 155 (263)
T cd06625 116 GVEYLHSNMIVHRDIKGANILRDSA--GNVKLGDFGASKRLQ 155 (263)
T ss_pred HHHHHHhCCeecCCCCHHHEEEcCC--CCEEEeecccceecc
Confidence 678899999999999999999854 899999999987654
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.4e-11 Score=129.13 Aligned_cols=139 Identities=16% Similarity=0.271 Sum_probs=103.8
Q ss_pred cccccccceeeEEEEe-cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-||+||||..+.|+. -++++||||.--- +.+... ++.|-
T Consensus 34 kKIGeGsFG~lf~G~Nl~nne~VAIKfEPr-------------------------kS~APQ--------------LrdEY 74 (449)
T KOG1165|consen 34 KKIGEGSFGVLFLGKNLYNNEPVAIKFEPR-------------------------KSEAPQ--------------LRDEY 74 (449)
T ss_pred cccccCcceeeecccccccCceEEEEeccc-------------------------cCCcch--------------HHHHH
Confidence 5699999999999994 4899999995210 011111 22244
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cC-CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SS-ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~-~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+..+.+.. ..-||.||+ |+ ..+||||.+ |.+|+|+..+....+..+.++...++++
T Consensus 75 r~YKlL~g-------------------~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi 134 (449)
T KOG1165|consen 75 RTYKLLGG-------------------TEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMI 134 (449)
T ss_pred HHHHHHcC-------------------CCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHH
Confidence 33333322 356899987 44 478999988 9999999888877788888888777777
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCC---CceEEEecccccccChH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPP---HRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~---g~i~LiDFG~~~~l~~~ 208 (864)
++.+|++.+|.||+||.|+||.+-+. ..|.+|||||++..-+.
T Consensus 135 ~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp 182 (449)
T KOG1165|consen 135 TRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP 182 (449)
T ss_pred HHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence 88899999999999999999975321 35889999999976443
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.3e-11 Score=130.81 Aligned_cols=141 Identities=19% Similarity=0.273 Sum_probs=99.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-||.|.-++||+|+.. .++.||||+..- +....|+.. +++|.
T Consensus 32 e~IG~G~sa~V~~A~c~p~~e~VAIK~inL---Ekc~~~ld~---------------------------------l~kE~ 75 (516)
T KOG0582|consen 32 EVIGVGASAVVYLARCIPTNEVVAIKIINL---EKCNNDLDA---------------------------------LRKEV 75 (516)
T ss_pred EEEeccceeEeeeeeecccCCEEEEEEeeh---hhhhhhHHH---------------------------------HHHHH
Confidence 45899988999999954 789999997531 111112211 34466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEE-EeeEE-ecCCceEEEeecCCcCCCChHHH-hhcCCCHHHHHHHHHHHH-
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVL-IPEVI-QSSETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~-vP~v~-~~~~~vLvmE~i~G~~L~~~~~~-~~~~~~~~~l~~~~~~~~- 165 (864)
.++..+.| |+|. .-..+ .....++||-|+.|+++.++... -..|++...++..+-+.+
T Consensus 76 ~~msl~~H------------------PNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~Lk 137 (516)
T KOG0582|consen 76 QTMSLIDH------------------PNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLK 137 (516)
T ss_pred HHhhhcCC------------------CCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHH
Confidence 66665533 2221 11111 15678899999999999998653 234666666666555555
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+.++|.+|.||||+|+|||||+.+ |.|+|.|||.+..+-+
T Consensus 138 aL~YLH~~G~IHRdvKAgnILi~~d--G~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 138 ALDYLHQNGHIHRDVKAGNILIDSD--GTVKLADFGVSASLFD 178 (516)
T ss_pred HHHHHHhcCceecccccccEEEcCC--CcEEEcCceeeeeecc
Confidence 888999999999999999999976 9999999998776644
|
|
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.8e-11 Score=126.34 Aligned_cols=140 Identities=19% Similarity=0.248 Sum_probs=100.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++|++|++|+||+++.. +|+.|++|+.+....+.. -++.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-------------------------------------~~~~~e~ 48 (253)
T cd05122 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKK-------------------------------------EKIINEI 48 (253)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEecccchhHH-------------------------------------HHHHHHH
Confidence 68999999999999986 799999999876443110 0133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ + .+++++ . ....+++|||++|.+|.++........+...+...+.+++
T Consensus 49 ~~l~~l~~------------------~--~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~ 108 (253)
T cd05122 49 QILKKCKH------------------P--NIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELL 108 (253)
T ss_pred HHHHhCCC------------------C--CEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHH
Confidence 44444321 1 233333 2 4668899999999999887543323456666666555554
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+..+....
T Consensus 109 ~~l~~lh~~~i~h~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~~~ 152 (253)
T cd05122 109 KGLEYLHSNGIIHRDIKAANILLTSD--GEVKLIDFGLSAQLSDTK 152 (253)
T ss_pred HHHHHhhcCCEecCCCCHHHEEEccC--CeEEEeeccccccccccc
Confidence 788999999999999999999865 899999999988776543
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.9e-11 Score=132.49 Aligned_cols=77 Identities=18% Similarity=0.200 Sum_probs=58.5
Q ss_pred cCCceEEEeecCCcCCCChHHHhh---------------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEcc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 188 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 188 (864)
....+++|||++|.+|.++..... ..++...+...+.++. +..+|+.|++|+|++|.|||++.
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~ 159 (303)
T cd05088 80 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE 159 (303)
T ss_pred CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecC
Confidence 456899999999999988754221 1234444555444443 78889999999999999999986
Q ss_pred CCCCceEEEecccccc
Q 002927 189 DPPHRPILLDFGLTKK 204 (864)
Q Consensus 189 ~~~g~i~LiDFG~~~~ 204 (864)
+ +.++|+|||++..
T Consensus 160 ~--~~~kl~dfg~~~~ 173 (303)
T cd05088 160 N--YVAKIADFGLSRG 173 (303)
T ss_pred C--CcEEeCccccCcc
Confidence 5 8999999998753
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.4e-11 Score=135.06 Aligned_cols=138 Identities=18% Similarity=0.246 Sum_probs=87.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.......... . .++.+|.
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-----------------------------~------~~~~~E~ 67 (355)
T cd07874 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH-----------------------------A------KRAYREL 67 (355)
T ss_pred EEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHH-----------------------------H------HHHHHHH
Confidence 78999999999999975 7999999986543211100 0 0122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
..+..+.+.. -+.+..++. ....++||||++|. +.+.. ....+...+...+.
T Consensus 68 ~~l~~l~h~n-----------------iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~---~~~l~~~~~~~~~~ 126 (355)
T cd07874 68 VLMKCVNHKN-----------------IISLLNVFTPQKSLEEFQDVYLVMELMDAN-LCQVI---QMELDHERMSYLLY 126 (355)
T ss_pred HHHHHhCCCc-----------------hhceeeeeeccccccccceeEEEhhhhccc-HHHHH---hhcCCHHHHHHHHH
Confidence 3333332210 111122221 13458999999874 33222 12344444444444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+++ +..+|+.|++|||+||+||+++.+ +.++|+|||+++...
T Consensus 127 qi~~aL~~LH~~givHrDikp~Nill~~~--~~~kl~Dfg~~~~~~ 170 (355)
T cd07874 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTAG 170 (355)
T ss_pred HHHHHHHHHHhCCcccCCCChHHEEECCC--CCEEEeeCcccccCC
Confidence 433 788999999999999999999865 899999999987654
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.8e-11 Score=128.00 Aligned_cols=77 Identities=19% Similarity=0.294 Sum_probs=58.8
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+++|||++|.+|.++.... ...+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 69 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~ 145 (260)
T cd05611 69 KDYLYLVMEYLNGGDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQT--GHLKLTDFGLSR 145 (260)
T ss_pred CCeEEEEEeccCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC--CcEEEeecccce
Confidence 45678999999999998875422 2344444444444433 678999999999999999999865 899999999876
Q ss_pred cc
Q 002927 204 KL 205 (864)
Q Consensus 204 ~l 205 (864)
..
T Consensus 146 ~~ 147 (260)
T cd05611 146 NG 147 (260)
T ss_pred ec
Confidence 54
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.2e-11 Score=128.18 Aligned_cols=136 Identities=18% Similarity=0.165 Sum_probs=92.0
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||.|++|+||++.. +|+.||||+.+..... . .+.+|..
T Consensus 12 ~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~~~---------------------------------~------~~~~e~~ 51 (254)
T cd05083 12 EIIGEGEFGAVLQGEY-TGQKVAVKNIKCDVTA---------------------------------Q------AFLEETA 51 (254)
T ss_pred eeeccCCCCceEeccc-CCCceEEEeecCcchH---------------------------------H------HHHHHHH
Confidence 6799999999999974 7899999986532210 0 1334544
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--HH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~--l~ 167 (864)
.+.++.+. .-+.+.........+++|||++|.+|.++..... ...+...+...+.+++ +.
T Consensus 52 ~l~~~~~~-----------------~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~ 114 (254)
T cd05083 52 VMTKLHHK-----------------NLVRLLGVILHNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGME 114 (254)
T ss_pred HHHhCCCC-----------------CcCeEEEEEcCCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHH
Confidence 44443221 1122222223456789999999999988754322 1234444444333333 67
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
.+|..|++|+|+||+||+++.+ +.++|+|||++...
T Consensus 115 ~lH~~~~~H~dl~p~nili~~~--~~~kl~Dfg~~~~~ 150 (254)
T cd05083 115 YLESKKLVHRDLAARNILVSED--GVAKVSDFGLARVG 150 (254)
T ss_pred HHHhCCeeccccCcceEEEcCC--CcEEECCCccceec
Confidence 8899999999999999999865 89999999988754
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.2e-11 Score=140.84 Aligned_cols=133 Identities=20% Similarity=0.118 Sum_probs=91.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|+.. +++.||||..... .+.+|+
T Consensus 175 ~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~-------------------------------------------~~~~E~ 211 (461)
T PHA03211 175 RALTPGSEGCVFESSHPDYPQRVVVKAGWYA-------------------------------------------SSVHEA 211 (461)
T ss_pred EEEccCCCeEEEEEEECCCCCEEEEeccccc-------------------------------------------CHHHHH
Confidence 57999999999999976 6899999942110 123466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.+. .-+.+-.+.. ....+|+||++.| .|.+........++...+...+.++. +
T Consensus 212 ~iL~~L~Hp-----------------nIv~l~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~l~~~~~~~i~~qi~~aL 273 (461)
T PHA03211 212 RLLRRLSHP-----------------AVLALLDVRVVGGLTCLVLPKYRS-DLYTYLGARLRPLGLAQVTAVARQLLSAI 273 (461)
T ss_pred HHHHHCCCC-----------------CCCcEEEEEEECCEEEEEEEccCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 655555331 0122222222 4567899999975 44444322223456666665555554 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+|..||+|||+||+|||++.+ +.++|+|||+++.+.
T Consensus 274 ~yLH~~gIvHrDLKP~NILl~~~--~~vkL~DFGla~~~~ 311 (461)
T PHA03211 274 DYIHGEGIIHRDIKTENVLVNGP--EDICLGDFGAACFAR 311 (461)
T ss_pred HHHHHCCEEECcCCHHHEEECCC--CCEEEcccCCceecc
Confidence 88999999999999999999865 889999999987654
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=6.6e-11 Score=122.10 Aligned_cols=139 Identities=14% Similarity=0.123 Sum_probs=87.7
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.++||+|++|.||. .+ ++.. +||+.+++-... .+ ++.+|
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~-------------------------------~~------~~~rE 46 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGG-------------------------------DK------EIRRE 46 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccch-------------------------------HH------HHHHH
Confidence 47999999999996 43 5555 699987642110 00 13445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCC---c-e-EEEee--cCCcCCCChHHHhhcCCCHH-HH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSE---T-V-LILEF--MDGIRLNDCESLEAFGVNKQ-KV 157 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~---~-v-LvmE~--i~G~~L~~~~~~~~~~~~~~-~l 157 (864)
.+.+..+.+. ......|+++|. ++. . + +|||| ++|.+|.++... ...+.. ..
T Consensus 47 i~~l~~L~~~---------------~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~--~~~~e~~~~ 109 (210)
T PRK10345 47 LKYYAHLSRR---------------LIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQ--CRYEEDVAQ 109 (210)
T ss_pred HHHHHHhhcc---------------CCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHc--ccccHhHHH
Confidence 5555555331 112344677764 221 2 2 78999 557899888642 223322 23
Q ss_pred HHHHHHHHHHHHHhcCeeccCCCCCCeEEccC--CCCceEEEeccccccc
Q 002927 158 VEEITRAYAHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKL 205 (864)
Q Consensus 158 ~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l 205 (864)
...++..+++.+|++||+|||+||+|||++.. ++++++|+||+-...+
T Consensus 110 ~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~~ 159 (210)
T PRK10345 110 LRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGESTF 159 (210)
T ss_pred HHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcce
Confidence 45555566789999999999999999999753 2347999994434443
|
|
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.3e-11 Score=129.92 Aligned_cols=143 Identities=17% Similarity=0.173 Sum_probs=95.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|..+ +++.||+|+.......... -++.+|.
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~~e~ 50 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQ------------------------------------KQILREL 50 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHH------------------------------------HHHHHHH
Confidence 67999999999999987 7999999987654322111 1122343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+...+. ....+|+|||++|.+|.++............+...+.+++ +
T Consensus 51 ~~l~~~~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l 113 (265)
T cd06605 51 DILHKCNSP-----------------YIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGL 113 (265)
T ss_pred HHHHHCCCC-----------------chhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHH
Confidence 333333210 0011111122 4567899999999999887653323445555444444443 6
Q ss_pred HHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 167 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 167 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
..+|. .|++|+|+||+||+++.+ +.++|+|||.+..+...
T Consensus 114 ~~lH~~~~i~H~dl~~~ni~~~~~--~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 114 TYLHEKHKIIHRDVKPSNILVNSR--GQIKLCDFGVSGQLVNS 154 (265)
T ss_pred HHHcCCCCeecCCCCHHHEEECCC--CCEEEeecccchhhHHH
Confidence 78899 999999999999999965 89999999998766543
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.1e-11 Score=131.57 Aligned_cols=138 Identities=20% Similarity=0.219 Sum_probs=93.4
Q ss_pred cccccccceeeEEEEecC-------------C--CEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHH
Q 002927 11 TPLATASIAQVHRATLVD-------------G--RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEW 75 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~-------------G--~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 75 (864)
+.||+|++|.||+++... + ..||||+.+++.......
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~---------------------------- 62 (295)
T cd05097 11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARN---------------------------- 62 (295)
T ss_pred hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHH----------------------------
Confidence 569999999999998642 2 248999988764322111
Q ss_pred HHHhHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh--
Q 002927 76 CKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-- 149 (864)
Q Consensus 76 ~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~-- 149 (864)
+|.+|.+.+.++++ ..+.+++ . ....++||||++|.+|.++.....
T Consensus 63 --------~~~~ei~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~ 114 (295)
T cd05097 63 --------DFLKEIKIMSRLKN--------------------PNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIE 114 (295)
T ss_pred --------HHHHHHHHHHhCCC--------------------CCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhcccc
Confidence 14456665555432 1223333 2 566789999999999988753221
Q ss_pred ---------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 150 ---------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 150 ---------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.......+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~--~~~kl~dfg~~~~~~ 180 (295)
T cd05097 115 STFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNH--YTIKIADFGMSRNLY 180 (295)
T ss_pred ccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCC--CcEEecccccccccc
Confidence 0123334444444443 678899999999999999999865 789999999987653
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.24 E-value=4e-11 Score=128.59 Aligned_cols=142 Identities=21% Similarity=0.225 Sum_probs=95.7
Q ss_pred ccccccccceeeEEEEec-CCC---EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 10 ETPLATASIAQVHRATLV-DGR---QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~---~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
.+-||.|++|.||+|+++ +|+ .||||+.......... -+|
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~ 52 (269)
T cd05065 9 EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQR------------------------------------RDF 52 (269)
T ss_pred EeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHH------------------------------------HHH
Confidence 366999999999999976 443 6999987654321110 013
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
..|+..+.++.+. .-+.+...+. ....++||||++|.+|.++........+...+...+.++
T Consensus 53 ~~e~~~l~~l~h~-----------------ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l 115 (269)
T cd05065 53 LSEASIMGQFDHP-----------------NIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGI 115 (269)
T ss_pred HHHHHHHHhCCCc-----------------CcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHH
Confidence 4455555444221 0122222222 456789999999999988765433345555555544444
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+ +..+|+.|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 116 ~~al~~lH~~g~~H~dl~p~nili~~~--~~~kl~dfg~~~~~~ 157 (269)
T cd05065 116 AAGMKYLSEMNYVHRDLAARNILVNSN--LVCKVSDFGLSRFLE 157 (269)
T ss_pred HHHHHHHHHCCEeecccChheEEEcCC--CcEEECCCccccccc
Confidence 3 778899999999999999999854 899999999887654
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.8e-11 Score=141.92 Aligned_cols=125 Identities=14% Similarity=0.136 Sum_probs=84.4
Q ss_pred ceEEEeecCCcCCCChHHH-hhcCCCHHHHHHHHHHHH--HHHHHhcC--eeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 129 TVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~-~~~~~~~~~l~~~~~~~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
..|.||||.|+.|-|++.. ...++...++++++.+.+ +..||... +||||||=+|||+..+ |..+|||||.+.
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~--g~~KLCDFGSat 194 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSAD--GNYKLCDFGSAT 194 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCC--CCEEeCcccccc
Confidence 3589999999999888652 234577888888887776 77889888 9999999999999965 899999999886
Q ss_pred ccChH-----HHHHHHHHHHHH--HhCCHHHHHHHHHHcCCCcCCCcHHHHHHHHHHHH
Q 002927 204 KLSSS-----MKQALAKMFFAA--AEGDHVALLSAFAEMGLRLRLDVPEQAMEVSTLFF 255 (864)
Q Consensus 204 ~l~~~-----~r~~~~~l~~a~--~~~d~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 255 (864)
..... .+..+-+=+... ..-...++++.+..+++..+.|.=+.-.-+..+.|
T Consensus 195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy 253 (738)
T KOG1989|consen 195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCY 253 (738)
T ss_pred cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHH
Confidence 44322 222222222111 12334668888888888654444333333334433
|
|
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.1e-11 Score=127.57 Aligned_cols=137 Identities=21% Similarity=0.216 Sum_probs=93.2
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|.. .|+.||+|..+..... -+|.+|+.
T Consensus 12 ~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~~~---------------------------------------~~~~~e~~ 51 (256)
T cd05082 12 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA---------------------------------------QAFLAEAS 51 (256)
T ss_pred eeecccCCCeEEEEEE-cCCcEEEEEeCCCchH---------------------------------------HHHHHHHH
Confidence 6799999999999986 5889999986532110 01344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhc-CCCHHHHHHHHHHHH--
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITRAY-- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~-~~~~~~l~~~~~~~~-- 165 (864)
.+.++.+. .-+.+...+. ....+++|||++|.+|.++...... ..+...+...+.+++
T Consensus 52 ~l~~l~~~-----------------~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~ 114 (256)
T cd05082 52 VMTQLRHS-----------------NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 114 (256)
T ss_pred HHHhCCCC-----------------CeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 55554321 1122222222 3457899999999999887543222 134455555444443
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|+||+++.+ ++++|+|||++....
T Consensus 115 l~~lH~~~i~H~dlkp~nil~~~~--~~~kl~dfg~~~~~~ 153 (256)
T cd05082 115 MEYLEANNFVHRDLAARNVLVSED--NVAKVSDFGLTKEAS 153 (256)
T ss_pred HHHHHhCCEeccccchheEEEcCC--CcEEecCCccceecc
Confidence 788999999999999999999865 899999999887653
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.2e-11 Score=136.48 Aligned_cols=50 Identities=14% Similarity=0.251 Sum_probs=39.7
Q ss_pred HHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 155 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 155 ~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+...+.++. +..+|..|++|||+||.|||++.+ +.++|+|||++..+.
T Consensus 212 ~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~--~~~kL~DfGla~~~~ 263 (374)
T cd05106 212 DDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDG--RVAKICDFGLARDIM 263 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCC--CeEEEeeceeeeecc
Confidence 34444444443 788999999999999999999865 889999999987654
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.7e-11 Score=127.46 Aligned_cols=140 Identities=21% Similarity=0.232 Sum_probs=96.1
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.|+.|++|.||+|...++..||||+.+++.... -+|.+|++
T Consensus 12 ~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~--------------------------------------~~~~~e~~ 53 (260)
T cd05073 12 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV--------------------------------------EAFLAEAN 53 (260)
T ss_pred eEecCccceEEEEEEecCCccEEEEecCCChhHH--------------------------------------HHHHHHHH
Confidence 6799999999999997778889999876542110 01344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--HH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~--l~ 167 (864)
.+.++.+. ..+.+.........+++|||++|.+|.++..... ...+...+...+.+++ +.
T Consensus 54 ~l~~l~~~-----------------~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~ 116 (260)
T cd05073 54 VMKTLQHD-----------------KLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 116 (260)
T ss_pred HHHhcCCC-----------------CcceEEEEEcCCCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHH
Confidence 55554321 1233333333556789999999999988754221 1233444444343333 67
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+|..|++|+|++|.||+++.+ +.++|+|||.+..+..
T Consensus 117 ~lH~~~i~H~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~ 154 (260)
T cd05073 117 FIEQRNYIHRDLRAANILVSAS--LVCKIADFGLARVIED 154 (260)
T ss_pred HHHhCCccccccCcceEEEcCC--CcEEECCCcceeeccC
Confidence 8899999999999999999865 8999999999876643
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.24 E-value=3e-11 Score=131.21 Aligned_cols=138 Identities=17% Similarity=0.203 Sum_probs=92.0
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||.|++|.||+|+.+ .+..||||+........ .+.+
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 55 (288)
T cd05061 12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR------------------------------------ERIE 55 (288)
T ss_pred eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHH------------------------------------HHHH
Confidence 67999999999999753 25589999765322100 1112
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhc---------C
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF---------G 151 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~---------~ 151 (864)
+.+|...+.++.+ + .|++++. ....+++|||++|++|.+....... .
T Consensus 56 ~~~e~~~l~~l~~------------------~--~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~ 115 (288)
T cd05061 56 FLNEASVMKGFTC------------------H--HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 115 (288)
T ss_pred HHHHHHHHHhCCC------------------C--CeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCC
Confidence 4445555555422 1 2333332 5668999999999999988642211 1
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 152 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 152 ~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.....+...+.+++ +..+|+.|++|+|+||.||+++.+ +.++|+|||+++.+.
T Consensus 116 ~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~--~~~~L~Dfg~~~~~~ 170 (288)
T cd05061 116 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD--FTVKIGDFGMTRDIY 170 (288)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCC--CcEEECcCCcccccc
Confidence 12233333333333 678899999999999999999865 899999999987653
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.5e-11 Score=132.24 Aligned_cols=143 Identities=16% Similarity=0.118 Sum_probs=95.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++||+|++|+||+|+.+ +|+.||||+..+....... .+-.+..|.
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~----------------------------------~~~~~~~e~ 52 (280)
T cd05581 7 KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEK----------------------------------KVKYVKIEK 52 (280)
T ss_pred eeecCCCceEEEEEEEcCCCCEEEEEEechHhccchH----------------------------------HHHHHHHHH
Confidence 68999999999999986 7999999987542110000 000122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++.. ...|++++. ....+++|||++|.+|.+.... ...+....+...+.+++
T Consensus 53 ~~~~~l~~-------------------~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~ql~ 112 (280)
T cd05581 53 EVLTRLNG-------------------HPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRK-YGSLDEKCTRFYAAEIL 112 (280)
T ss_pred HHHHhccc-------------------CCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 33333220 011222221 3557899999999999877542 22455555555444444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
+..+|..|++|+|++|.||+++.+ ++++|+|||++..+....
T Consensus 113 ~~l~~Lh~~~~~H~dl~~~ni~i~~~--~~~~l~df~~~~~~~~~~ 156 (280)
T cd05581 113 LALEYLHSKGIIHRDLKPENILLDKD--MHIKITDFGTAKVLDPNS 156 (280)
T ss_pred HHHHHHHHCCeeecCCCHHHeEECCC--CCEEecCCccccccCCcc
Confidence 678999999999999999999865 899999999988776533
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.2e-11 Score=127.02 Aligned_cols=140 Identities=13% Similarity=0.131 Sum_probs=96.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|+||+|+.+ +|+.|++|......... . ..-++.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~---------------------------------~~~~~~~e~ 50 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNR--R---------------------------------EREEAIDEA 50 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCH--H---------------------------------HHHHHHHHH
Confidence 67999999999999976 79999999754211000 0 011234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~ 164 (864)
+.+.++++ + .+.+++. ....+++|||++|.+|.++.... ....+...+...+.++
T Consensus 51 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l 110 (256)
T cd08529 51 RVLAKLDS------------------S--YIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQI 110 (256)
T ss_pred HHHHhcCC------------------C--CeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 55554432 1 1222221 34578999999999998875432 2334555555544444
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 111 ~~al~~lH~~~i~h~dl~~~nili~~~--~~~~l~df~~~~~~~~ 153 (256)
T cd08529 111 LLGLAHLHSKKILHRDIKSLNLFLDAY--DNVKIGDLGVAKLLSD 153 (256)
T ss_pred HHHHHHHHHCCcccCCCCcceEEEeCC--CCEEEcccccceeccC
Confidence 3 778899999999999999999865 8999999999887654
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.6e-11 Score=129.25 Aligned_cols=138 Identities=12% Similarity=0.188 Sum_probs=93.2
Q ss_pred cccccccceeeEEEEec-----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV-----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||+|++|+||+|+.. +++.|+||..+....... .-++
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~------------------------------------~~~~ 54 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQ------------------------------------WGEF 54 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHH------------------------------------HHHH
Confidence 67999999999999852 568899997654221110 0124
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh------------
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA------------ 149 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~------------ 149 (864)
.+|++.+.++++ ++ +++++ . ....+++|||++|.+|.++.....
T Consensus 55 ~~E~~~l~~l~h------------------~n--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 114 (283)
T cd05090 55 QQEASLMAELHH------------------PN--IVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDED 114 (283)
T ss_pred HHHHHHHhhCCC------------------CC--eeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccc
Confidence 445555555432 12 23333 2 456789999999999988753221
Q ss_pred ----cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 150 ----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 150 ----~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..++...+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||+++.+.
T Consensus 115 ~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~--~~~kl~dfg~~~~~~ 175 (283)
T cd05090 115 GTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ--LHVKISDLGLSREIY 175 (283)
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC--CcEEecccccccccc
Confidence 1123344444444433 788999999999999999999865 789999999988764
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.3e-11 Score=129.17 Aligned_cols=140 Identities=19% Similarity=0.178 Sum_probs=97.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|+||+|+.. +++.||+|+.+....... -+|..|+
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~-------------------------------------~~~~~e~ 53 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEEL-------------------------------------EDFMVEI 53 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHH-------------------------------------HHHHHHH
Confidence 56999999999999975 799999998765422211 0144455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+...+. ....++||||++|.+|.++.......++...+...+.+++ +
T Consensus 54 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l 116 (280)
T cd06611 54 DILSECKHP-----------------NIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEAL 116 (280)
T ss_pred HHHHhCCCC-----------------ceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 555554321 0122222222 4567899999999999887543333455555555544444 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+|..|++|+|++|.||+++.+ ++++|+|||++....
T Consensus 117 ~~lh~~~i~h~dl~p~nili~~~--~~~~l~d~g~~~~~~ 154 (280)
T cd06611 117 NFLHSHKVIHRDLKAGNILLTLD--GDVKLADFGVSAKNK 154 (280)
T ss_pred HHHHHCCcccCCCChhhEEECCC--CCEEEccCccchhhc
Confidence 78899999999999999999865 899999999876553
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.2e-11 Score=128.95 Aligned_cols=143 Identities=17% Similarity=0.190 Sum_probs=96.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|+||+|+.. +|+.||||+.+......... ++.+|.
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~------------------------------------~~~~e~ 50 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVS------------------------------------DIQREV 50 (277)
T ss_pred hheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHH------------------------------------HHHHHH
Confidence 57999999999999975 89999999876543211000 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++... .++.+ .+...+. ....+|+|||++|.+|.++.. ...+....+...+.+++
T Consensus 51 ~~l~~l~~~---------------~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~l~~~~~~~i~~~i~~~ 113 (277)
T cd06917 51 ALLSQLRQS---------------QPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMK--AGPIAEKYISVIIREVLVA 113 (277)
T ss_pred HHHHHhccC---------------CCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHH--ccCCCHHHHHHHHHHHHHH
Confidence 555555321 11222 1222222 556789999999999987753 23445444444333333
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+...
T Consensus 114 l~~lh~~~i~H~dl~p~ni~i~~~--~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 114 LKYIHKVGVIHRDIKAANILVTNT--GNVKLCDFGVAALLNQN 154 (277)
T ss_pred HHHHHhCCcccCCcCHHHEEEcCC--CCEEEccCCceeecCCC
Confidence 778999999999999999999965 89999999998876543
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.1e-11 Score=137.07 Aligned_cols=128 Identities=15% Similarity=0.119 Sum_probs=87.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|+||+|+.. +++.||+|+...+.. ..|+
T Consensus 72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~-------------------------------------------~~E~ 108 (357)
T PHA03209 72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTT-------------------------------------------LIEA 108 (357)
T ss_pred EEecCCCCeEEEEEEECCCCceEEEEeCCcccc-------------------------------------------HHHH
Confidence 67999999999999976 688999997543211 1133
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++++ + .|.+++ . ....++|||++.| .|.++.......+....+...+.+++
T Consensus 109 ~~l~~l~h------------------~--~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~ 167 (357)
T PHA03209 109 MLLQNVNH------------------P--SVIRMKDTLVSGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQIL 167 (357)
T ss_pred HHHHhCCC------------------C--CCcChhheEEeCCeeEEEEEccCC-cHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 33333322 1 122222 2 4457899999976 45444332333455555555444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+..+|..|++|||+||.|||++.+ +.++|+|||++..
T Consensus 168 ~aL~~LH~~~ivHrDlkp~Nill~~~--~~~kl~DfG~a~~ 206 (357)
T PHA03209 168 EGLRYLHAQRIIHRDVKTENIFINDV--DQVCIGDLGAAQF 206 (357)
T ss_pred HHHHHHHHCCeecCCCCHHHEEECCC--CCEEEecCccccc
Confidence 888999999999999999999865 8899999998864
|
|
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.4e-11 Score=131.64 Aligned_cols=143 Identities=17% Similarity=0.201 Sum_probs=89.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||+.+...... . ...++.+|.
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~--------------------~---------------~~~~~~~e~ 50 (288)
T cd07863 6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED--------------------G---------------LPLSTVREV 50 (288)
T ss_pred eEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC--------------------C---------------CchHHHHHH
Confidence 56999999999999976 79999999876422110 0 000122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe------cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ------SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEI 161 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~------~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~ 161 (864)
..+.+++.. +++.+ .+-.++. ....+++|||++| ++.++.... ..++....+...+
T Consensus 51 ~~l~~l~~~---------------~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~ 114 (288)
T cd07863 51 ALLKRLEAF---------------DHPNIVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLM 114 (288)
T ss_pred HHHHHhhhc---------------CCCCeeeeeeeeccccCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHH
Confidence 334444321 11111 1112221 1235799999986 555443221 1234555555555
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 115 ~qi~~al~~lH~~~ivH~dikp~Nili~~~--~~~kl~dfg~~~~~~ 159 (288)
T cd07863 115 RQFLRGLDFLHANCIVHRDLKPENILVTSG--GQVKLADFGLARIYS 159 (288)
T ss_pred HHHHHHHHHHHhCCeecCCCCHHHEEECCC--CCEEECccCcccccc
Confidence 5544 788999999999999999999865 899999999987654
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.8e-11 Score=121.11 Aligned_cols=140 Identities=20% Similarity=0.270 Sum_probs=99.4
Q ss_pred cccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHHH
Q 002927 13 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 91 (864)
Q Consensus 13 lasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n 91 (864)
|++|++|+||+++.. +|++++||+.++..... .+-.+.+|.+.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~------------------------------------~~~~~~~e~~~ 44 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS------------------------------------LLEELLREIEI 44 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh------------------------------------HHHHHHHHHHH
Confidence 689999999999976 49999999987665422 00113445555
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 92 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.++.+ ..+++++. ....+++|||++|.+|.++........+...+...+.+++
T Consensus 45 ~~~l~~--------------------~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 104 (215)
T cd00180 45 LKKLNH--------------------PNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEG 104 (215)
T ss_pred HHhcCC--------------------CCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHH
Confidence 555422 23455543 3568899999999999887543212455555555444443
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
+..+|..|++|+|++|+||+++.. +++++|+|||++.......
T Consensus 105 l~~lh~~~~~H~dl~~~ni~~~~~-~~~~~l~d~~~~~~~~~~~ 147 (215)
T cd00180 105 LEYLHSNGIIHRDLKPENILLDSD-NGKVKLADFGLSKLLTSDK 147 (215)
T ss_pred HHHHHhCCeeccCCCHhhEEEeCC-CCcEEEecCCceEEccCCc
Confidence 788999999999999999999861 3799999999998776543
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.3e-11 Score=131.41 Aligned_cols=142 Identities=20% Similarity=0.225 Sum_probs=95.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|+||+|+.+ +|+.||+|+......... . +-.+.+|+
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~-----------------------------~------~~~~~~e~ 51 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPV-----------------------------I------KKIALREI 51 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccCcc-----------------------------c------cHHHHHHH
Confidence 56999999999999987 799999998643211000 0 00133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+...+. ....+++|||++|..+..+.. .....+...+...+.+++ +
T Consensus 52 ~~l~~~~h~-----------------~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~ql~~~l 113 (286)
T cd07847 52 RMLKQLKHP-----------------NLVNLIEVFRRKRKLHLVFEYCDHTVLNELEK-NPRGVPEHLIKKIIWQTLQAV 113 (286)
T ss_pred HHHHhCCCC-----------------CEeeeeeEEeeCCEEEEEEeccCccHHHHHHh-CCCCCCHHHHHHHHHHHHHHH
Confidence 444443220 0122223333 456789999999987776532 222355555555555554 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 114 ~~LH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~~ 152 (286)
T cd07847 114 NFCHKHNCIHRDVKPENILITKQ--GQIKLCDFGFARILTG 152 (286)
T ss_pred HHHHHCCceecCCChhhEEEcCC--CcEEECccccceecCC
Confidence 78899999999999999999865 8999999999987754
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.8e-11 Score=127.62 Aligned_cols=81 Identities=17% Similarity=0.107 Sum_probs=61.1
Q ss_pred CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCC-----CceEEEec
Q 002927 127 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP-----HRPILLDF 199 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~-----g~i~LiDF 199 (864)
...+|+|||++|.+|.++........+...+...+.+++ +..+|..|++|+|+||.||+++.+.. ..++|+||
T Consensus 73 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df 152 (259)
T cd05037 73 DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDP 152 (259)
T ss_pred CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCC
Confidence 567999999999999887654333455555555444443 78899999999999999999986521 16999999
Q ss_pred ccccccCh
Q 002927 200 GLTKKLSS 207 (864)
Q Consensus 200 G~~~~l~~ 207 (864)
|++..+..
T Consensus 153 g~a~~~~~ 160 (259)
T cd05037 153 GIPITVLS 160 (259)
T ss_pred Cccccccc
Confidence 99876543
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY) | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.5e-10 Score=117.95 Aligned_cols=70 Identities=37% Similarity=0.716 Sum_probs=56.2
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
++..+|+||||+|.+|.+...+. +.+...+.+ .++++|.+|++|+||||||++++. +.+++|||+..+..
T Consensus 115 ~~~~~ll~EYIeG~~l~d~~~i~------e~~~~ki~~-~ikqlH~~G~~HGD~hpgNFlv~~---~~i~iID~~~k~~~ 184 (229)
T PF06176_consen 115 TSSYVLLMEYIEGVELNDIEDID------EDLAEKIVE-AIKQLHKHGFYHGDPHPGNFLVSN---NGIRIIDTQGKRMS 184 (229)
T ss_pred eeEEEEEEEEecCeecccchhcC------HHHHHHHHH-HHHHHHHcCCccCCCCcCcEEEEC---CcEEEEECcccccc
Confidence 57788999999999999875432 234444444 479999999999999999999984 46999999987753
|
The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.23 E-value=5.4e-11 Score=126.79 Aligned_cols=138 Identities=19% Similarity=0.249 Sum_probs=92.7
Q ss_pred ccccccceeeEEEEec---CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 12 PLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 12 plasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.||+|++|.||+|..+ +++.||||+.+....... .. -++..|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~-------------------------~~----------~~~~~e 46 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPA-------------------------LK----------DELLRE 46 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHH-------------------------HH----------HHHHHH
Confidence 4899999999999753 688999998754321110 00 013334
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---ecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
...+.++.+ +. +.+++ .....+|+|||+++.+|.++.... ...+...+...+.++.
T Consensus 47 ~~~l~~l~h------------------~~--i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~ 105 (257)
T cd05116 47 ANVMQQLDN------------------PY--IVRMIGICEAESWMLVMELAELGPLNKFLQKN-KHVTEKNITELVHQVS 105 (257)
T ss_pred HHHHHhCCC------------------CC--cceEEEEEcCCCcEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHH
Confidence 444444321 11 22222 245678999999999998875422 2345555555544444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 106 ~al~~lH~~~i~H~dlkp~nill~~~--~~~kl~Dfg~~~~~~~ 147 (257)
T cd05116 106 MGMKYLEETNFVHRDLAARNVLLVTQ--HYAKISDFGLSKALGA 147 (257)
T ss_pred HHHHHHHHCCEeecccchhhEEEcCC--CeEEECCCccccccCC
Confidence 788999999999999999999865 7899999999876643
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.23 E-value=5.2e-11 Score=134.08 Aligned_cols=73 Identities=21% Similarity=0.427 Sum_probs=53.4
Q ss_pred CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 128 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 128 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..++||||++| .+.+.. ....+...+...+.+++ +..+|..|++|||+||.||+++.+ +.++|+|||+++..
T Consensus 103 ~~~lv~e~~~~-~l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~kL~DfG~a~~~ 176 (364)
T cd07875 103 DVYIVMELMDA-NLCQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTA 176 (364)
T ss_pred eEEEEEeCCCC-CHHHHH---HhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCC--CcEEEEeCCCcccc
Confidence 45899999987 333322 12344444444444433 788999999999999999999865 89999999998765
Q ss_pred C
Q 002927 206 S 206 (864)
Q Consensus 206 ~ 206 (864)
.
T Consensus 177 ~ 177 (364)
T cd07875 177 G 177 (364)
T ss_pred C
Confidence 3
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.6e-11 Score=138.93 Aligned_cols=76 Identities=20% Similarity=0.204 Sum_probs=51.8
Q ss_pred ceEEEeecCCcCCCChHHH---hhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 129 TVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~---~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
.++||||++| ++.++... ....+....+...+.+++ +..+|..|++|||+||.|||++.+ ++.++|+|||+++
T Consensus 142 l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~-~~~vkL~DFGla~ 219 (440)
T PTZ00036 142 LNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPN-THTLKLCDFGSAK 219 (440)
T ss_pred EEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCC-CCceeeeccccch
Confidence 3589999987 44333221 112233333333333333 788999999999999999999854 3579999999987
Q ss_pred ccC
Q 002927 204 KLS 206 (864)
Q Consensus 204 ~l~ 206 (864)
.+.
T Consensus 220 ~~~ 222 (440)
T PTZ00036 220 NLL 222 (440)
T ss_pred hcc
Confidence 654
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.2e-11 Score=137.21 Aligned_cols=131 Identities=13% Similarity=0.077 Sum_probs=87.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +++.||||+... . .+.+|+
T Consensus 98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---~----------------------------------------~~~~E~ 134 (391)
T PHA03212 98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQR---G----------------------------------------GTATEA 134 (391)
T ss_pred EEEcCCCCeEEEEEEECCCCCEEEEechhh---h----------------------------------------hhHHHH
Confidence 56999999999999975 799999995220 0 023355
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++++. .-+.+-..+. ....+++||++.| .|.+... .........+...+.+++ +
T Consensus 135 ~il~~l~Hp-----------------nIv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~-~~~~l~~~~~~~i~~qi~~aL 195 (391)
T PHA03212 135 HILRAINHP-----------------SIIQLKGTFTYNKFTCLILPRYKT-DLYCYLA-AKRNIAICDILAIERSVLRAI 195 (391)
T ss_pred HHHHhCCCC-----------------CCCCEeEEEEECCeeEEEEecCCC-CHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 555554321 0122222232 4567899999964 4444322 223455555555444443 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+|..|++|||+||+|||++.+ +.++|+|||++...
T Consensus 196 ~ylH~~~IvHrDiKP~NIll~~~--~~vkL~DFG~a~~~ 232 (391)
T PHA03212 196 QYLHENRIIHRDIKAENIFINHP--GDVCLGDFGAACFP 232 (391)
T ss_pred HHHHhCCcccCCCChHhEEEcCC--CCEEEEeCCccccc
Confidence 88999999999999999999865 89999999998643
|
|
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.4e-11 Score=128.95 Aligned_cols=140 Identities=18% Similarity=0.176 Sum_probs=92.9
Q ss_pred cccccccceeeEEEEecC------CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLVD------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||.|++|.||+|+..+ ++.||||+.+....... +-+
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~ 54 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDA------------------------------------RKD 54 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHH------------------------------------HHH
Confidence 679999999999998743 57899998654322111 112
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-------------c
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-------------F 150 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~-------------~ 150 (864)
|.+|++.+.++.+. ..+.+..... ....+++|||++|.+|.++..... .
T Consensus 55 ~~~e~~~l~~l~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~ 117 (280)
T cd05049 55 FEREAELLTNFQHE-----------------NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMG 117 (280)
T ss_pred HHHHHHHHHhcCCC-----------------CchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccc
Confidence 44566666655321 0111222222 566899999999999988754221 1
Q ss_pred CCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 151 GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 151 ~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
......+...+.+++ +..+|..|++|+|++|+||+++.+ +.++|+|||++..+
T Consensus 118 ~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~--~~~kl~d~g~~~~~ 172 (280)
T cd05049 118 ELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYD--LVVKIGDFGMSRDV 172 (280)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCC--CeEEECCcccceec
Confidence 122333333333333 678899999999999999999865 89999999998754
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.3e-11 Score=129.13 Aligned_cols=141 Identities=16% Similarity=0.143 Sum_probs=93.8
Q ss_pred cccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHHH
Q 002927 13 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 91 (864)
Q Consensus 13 lasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n 91 (864)
|++|++|.||+|... +|+.||||+......... ..+..+..|.+.
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~----------------------------------~~~~~~~~e~~~ 46 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKR----------------------------------KGEQMALNEKKI 46 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhh----------------------------------hhhHHHHHHHHH
Confidence 689999999999865 799999998654221100 011123446655
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--HH
Q 002927 92 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~--l~ 167 (864)
+.++++. .-+.+...+. ....+|+|||++|.+|.+...... ..+....+...+.+++ +.
T Consensus 47 l~~l~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~ 109 (277)
T cd05577 47 LEKVSSR-----------------FIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLE 109 (277)
T ss_pred HHhCCCC-----------------CEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHH
Confidence 5554321 0122222232 456789999999999987654322 1345555444444433 67
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+|..|++|+|++|.||+++.+ +.++|+|||.+..+.
T Consensus 110 ~lH~~~i~H~di~p~Nil~~~~--~~~~l~dfg~~~~~~ 146 (277)
T cd05577 110 HLHQRRIVYRDLKPENVLLDDH--GNVRISDLGLAVELK 146 (277)
T ss_pred HHHhCCcccCCCCHHHEEECCC--CCEEEccCcchhhhc
Confidence 8899999999999999999865 899999999876553
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.8e-11 Score=127.46 Aligned_cols=143 Identities=16% Similarity=0.145 Sum_probs=94.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|... +|+.||||+.++..... . . ..-++.+|.
T Consensus 8 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~------------------------~------~~~~~~~ei 53 (267)
T cd08224 8 KKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMD----A------------------------K------ARQDCLKEI 53 (267)
T ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeecccccc----h------------------------h------hHHHHHHHH
Confidence 67999999999999987 89999999765311100 0 0 001133454
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHh---hcCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l~~~~~~~ 164 (864)
+.+.++.+ +. +.+...+. ....+++|||++|.+|.++.... ........+...+.++
T Consensus 54 ~~l~~~~~------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l 115 (267)
T cd08224 54 DLLKQLDH------------------PNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQL 115 (267)
T ss_pred HHHHhCCC------------------CCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHH
Confidence 44444322 11 11122222 45578999999999998765321 1223455555555544
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 116 ~~~l~~lh~~~i~h~dl~p~nil~~~~--~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 116 CSALEHMHSKRIMHRDIKPANVFITAT--GVVKLGDLGLGRFFSS 158 (267)
T ss_pred HHHHHHHHhCCEecCCcChhhEEECCC--CcEEEeccceeeeccC
Confidence 4 778899999999999999999865 8999999999876543
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.3e-11 Score=134.31 Aligned_cols=53 Identities=15% Similarity=0.221 Sum_probs=41.1
Q ss_pred CHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 153 NKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 153 ~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+...+...+.++. +..+|..|++|||+||.|||++.+ +.++|+|||++..+..
T Consensus 171 ~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~--~~vkL~DfG~a~~~~~ 225 (337)
T cd05054 171 TLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSEN--NVVKICDFGLARDIYK 225 (337)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCC--CcEEEeccccchhccc
Confidence 3333444444433 788999999999999999999865 8899999999887643
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.8e-11 Score=136.72 Aligned_cols=140 Identities=18% Similarity=0.225 Sum_probs=87.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.. +|+.||||+........ .. .-.+.+|+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~------------------------------~~~~~~E~ 50 (372)
T cd07853 6 RPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNL-----VS------------------------------CKRVFREL 50 (372)
T ss_pred ceeeeCCCEEEEEEEECCCCCEEEEEeccccccch-----HH------------------------------HHHHHHHH
Confidence 67999999999999975 89999999764221110 00 00123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~ 163 (864)
+.+..+++.. -+.+-.++. ....+++|||+.+ +|.+... ....+....+...+.+
T Consensus 51 ~~l~~l~h~n-----------------iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~-~~~~l~~~~~~~~~~q 111 (372)
T cd07853 51 KMLCFFKHDN-----------------VLSALDILQPPHIDPFEEIYVVTELMQS-DLHKIIV-SPQPLSSDHVKVFLYQ 111 (372)
T ss_pred HHHHhCCCCC-----------------cCCHhheecCCCccccceEEEEeecccc-CHHHHHh-cCCCCCHHHHHHHHHH
Confidence 4444443210 011111111 1246899999975 4433321 1223444444444444
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
++ +..+|..|++|+|+||.|||++.+ +.++|+|||++....
T Consensus 112 i~~aL~~LH~~~ivH~dlkp~Nili~~~--~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 112 ILRGLKYLHSAGILHRDIKPGNLLVNSN--CVLKICDFGLARVEE 154 (372)
T ss_pred HHHHHHHHHhCCeeCCCCChHHEEECCC--CCEEeccccceeecc
Confidence 33 788999999999999999999865 899999999987543
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.2e-11 Score=130.14 Aligned_cols=80 Identities=18% Similarity=0.140 Sum_probs=58.9
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCC-----CCceEEEe
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-----PHRPILLD 198 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-----~g~i~LiD 198 (864)
....+|||||++|.+|.++........+.......+.++. +..+|+.|++|+|+||.||+++..+ ...+++.|
T Consensus 88 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d 167 (274)
T cd05076 88 GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSD 167 (274)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecC
Confidence 4678999999999999877543333455555554444444 7889999999999999999997531 12478999
Q ss_pred ccccccc
Q 002927 199 FGLTKKL 205 (864)
Q Consensus 199 FG~~~~l 205 (864)
||++...
T Consensus 168 ~g~~~~~ 174 (274)
T cd05076 168 PGVSFTA 174 (274)
T ss_pred Ccccccc
Confidence 9987543
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.9e-11 Score=127.32 Aligned_cols=78 Identities=18% Similarity=0.103 Sum_probs=57.1
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcC----CCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEec
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFG----VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDF 199 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~----~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDF 199 (864)
....+|||||++|.+|.++....... .+...+...+.++. +..+|+.|++|+|+||.||+++.+ ++++|+||
T Consensus 67 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~--~~~kl~df 144 (269)
T cd05042 67 SIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTAD--LSVKIGDY 144 (269)
T ss_pred CCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCC--CcEEEecc
Confidence 45688999999999998875432211 12222333333332 678999999999999999999865 89999999
Q ss_pred cccccc
Q 002927 200 GLTKKL 205 (864)
Q Consensus 200 G~~~~l 205 (864)
|++...
T Consensus 145 g~~~~~ 150 (269)
T cd05042 145 GLALEQ 150 (269)
T ss_pred cccccc
Confidence 987654
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.9e-11 Score=131.86 Aligned_cols=139 Identities=20% Similarity=0.231 Sum_probs=93.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
..||+|++|+||+|+.+ +|+.||||+.+-.... .+-.+.+|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-------------------------------------~~~~~~~e~ 68 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQ-------------------------------------RRELLFNEV 68 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchh-------------------------------------HHHHHHHHH
Confidence 46999999999999975 8999999975422110 001133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+...+. ....+++|||++|.+|.++.. ....+...+...+.+++ +
T Consensus 69 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~ql~~~l 129 (292)
T cd06657 69 VIMRDYQHE-----------------NVVEMYNSYLVGDELWVVMEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLKAL 129 (292)
T ss_pred HHHHhcCCc-----------------chhheeeEEEeCCEEEEEEecCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHH
Confidence 444433210 0112222222 456789999999999987643 23345555555444444 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 130 ~~lH~~givH~dl~p~Nilv~~~--~~~~l~dfg~~~~~~~ 168 (292)
T cd06657 130 SVLHAQGVIHRDIKSDSILLTHD--GRVKLSDFGFCAQVSK 168 (292)
T ss_pred HHHHHCCeecCCCCHHHEEECCC--CCEEEcccccceeccc
Confidence 88999999999999999999865 8899999998876654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.1e-11 Score=131.09 Aligned_cols=138 Identities=20% Similarity=0.209 Sum_probs=93.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++||+|++|.||+|+.+ +|+.||||..+....... ...+.+|.
T Consensus 11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~------------------------------------~~~~~~E~ 54 (291)
T cd07844 11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGA------------------------------------PFTAIREA 54 (291)
T ss_pred EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCC------------------------------------chhHHHHH
Confidence 78999999999999976 799999998654321100 00123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+.++.+ +. +.+..++. ....++||||++| +|.++........+...+...+.+++
T Consensus 55 ~~l~~l~h------------------~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~a 115 (291)
T cd07844 55 SLLKDLKH------------------ANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRG 115 (291)
T ss_pred HHHhhCCC------------------cceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence 55555432 11 22222222 4567899999987 67665432223445555555544444
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++...
T Consensus 116 l~~lH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~~ 153 (291)
T cd07844 116 LAYCHQRRVLHRDLKPQNLLISER--GELKLADFGLARAK 153 (291)
T ss_pred HHHHHhCCeecccCCHHHEEEcCC--CCEEECcccccccc
Confidence 788999999999999999999865 89999999987654
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.3e-11 Score=127.42 Aligned_cols=138 Identities=15% Similarity=0.161 Sum_probs=94.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.. +++.||||+.+....... . .+.+|.
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~----~---------------------------------~~~~e~ 57 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDF----A---------------------------------VVQQEI 57 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHH----H---------------------------------HHHHHH
Confidence 67999999999999975 799999999765432211 0 012233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+..+.+ +. +.+...+. ....+++|||++|.+|.++... ....+...+...+.+++
T Consensus 58 ~~~~~l~h------------------~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~ 118 (267)
T cd06645 58 IMMKDCKH------------------SNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHV-TGPLSESQIAYVSRETLQG 118 (267)
T ss_pred HHHHhCCC------------------CCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHH
Confidence 33333211 11 12222222 4567899999999999887542 22355555555555444
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 119 l~~lH~~~i~H~dlkp~nili~~~--~~~~l~dfg~~~~~~ 157 (267)
T cd06645 119 LYYLHSKGKMHRDIKGANILLTDN--GHVKLADFGVSAQIT 157 (267)
T ss_pred HHHHHHCCeecCCCCHHHEEECCC--CCEEECcceeeeEcc
Confidence 778899999999999999999865 899999999987664
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.22 E-value=7.7e-11 Score=127.36 Aligned_cols=136 Identities=20% Similarity=0.200 Sum_probs=90.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.. +|+.||||+...+..... +-++.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~------------------------------------~~~~~~E~ 50 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVEL------------------------------------QKQIMSEL 50 (279)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHH------------------------------------HHHHHHHH
Confidence 67999999999999975 899999998754321110 01134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.+ +.+ .+...+. ....+|||||++|.++..... .+...+...+.+++
T Consensus 51 ~~l~~l~h------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~qi~~~ 107 (279)
T cd06619 51 EILYKCDS------------------PYIIGFYGAFFVENRISICTEFMDGGSLDVYRK-----IPEHVLGRIAVAVVKG 107 (279)
T ss_pred HHHHhCCC------------------CCeeeEEEEEEECCEEEEEEecCCCCChHHhhc-----CCHHHHHHHHHHHHHH
Confidence 55444422 111 2222222 456789999999998864321 23333333333332
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|+.|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 108 l~~lH~~~i~H~dlkp~Nill~~~--~~~~l~dfg~~~~~~~ 147 (279)
T cd06619 108 LTYLWSLKILHRDVKPSNMLVNTR--GQVKLCDFGVSTQLVN 147 (279)
T ss_pred HHHHHHCCEeeCCCCHHHEEECCC--CCEEEeeCCcceeccc
Confidence 678999999999999999999865 8999999999876643
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.22 E-value=9.6e-11 Score=126.69 Aligned_cols=139 Identities=16% Similarity=0.182 Sum_probs=94.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.. ++..|++|.......+... ++.+|+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~-------------------------------------~~~~e~ 53 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELE-------------------------------------DYMVEI 53 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHH-------------------------------------HHHHHH
Confidence 56999999999999976 6889999986543221110 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+..+.+ +. +.+...+. ....++||||++|.++.+.............+...+.+++
T Consensus 54 ~~l~~l~h------------------~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~ 115 (282)
T cd06643 54 DILASCDH------------------PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEA 115 (282)
T ss_pred HHHHHCCC------------------CCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 44444322 11 22222222 4567899999999998776432233455555555554444
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|+.|++|+|++|.||+++.+ ++++|+|||++....
T Consensus 116 L~~LH~~~i~H~dlkp~nili~~~--~~~kl~dfg~~~~~~ 154 (282)
T cd06643 116 LNYLHENKIIHRDLKAGNILFTLD--GDIKLADFGVSAKNT 154 (282)
T ss_pred HHHHHHCCeeecCCCcccEEEccC--CCEEEcccccccccc
Confidence 788999999999999999999865 899999999987654
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.9e-11 Score=127.72 Aligned_cols=138 Identities=16% Similarity=0.224 Sum_probs=93.0
Q ss_pred cccccccceeeEEEEec-CC-----CEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV-DG-----RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G-----~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||.|++|.||+|... .+ +.||+|+.+........ -+
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~------------------------------------~~ 54 (283)
T cd05048 11 EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQ------------------------------------QE 54 (283)
T ss_pred hcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHH------------------------------------HH
Confidence 67999999999999964 22 67999987643221111 01
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh-----------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA----------- 149 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~----------- 149 (864)
|.+|.+.+.++.+ + .+.+++ . ....+++|||++|.+|.++.....
T Consensus 55 ~~~ei~~l~~l~h------------------~--~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 114 (283)
T cd05048 55 FRQEAELMSDLQH------------------P--NIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGD 114 (283)
T ss_pred HHHHHHHHHhcCC------------------c--ccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCccccccccc
Confidence 3445555554432 1 122222 2 456789999999999987754321
Q ss_pred ----cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 150 ----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 150 ----~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..++...+...+.++. +..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 115 ~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~--~~~~L~dfg~~~~~~ 175 (283)
T cd05048 115 ETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEG--LTVKISDFGLSRDIY 175 (283)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCC--CcEEECCCcceeecc
Confidence 2234444444444443 788999999999999999999865 889999999987653
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.8e-11 Score=126.49 Aligned_cols=140 Identities=21% Similarity=0.176 Sum_probs=94.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|..+ +++.||+|+...+.... -++.+|.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--------------------------------------~~~~~e~ 53 (263)
T cd05052 12 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------------------------------------EEFLKEA 53 (263)
T ss_pred eecCCcccceEEEEEEecCCceEEEEEecCCchHH--------------------------------------HHHHHHH
Confidence 67999999999999976 68999999865432110 0133444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.+. .-+.+..... ....+++|||++|.+|.+...... ...+...+...+.+++
T Consensus 54 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~ 116 (263)
T cd05052 54 AVMKEIKHP-----------------NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 116 (263)
T ss_pred HHHHhCCCC-----------------ChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 444443221 0122222222 456789999999999988754221 2244444444444433
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|.||+++++ +.++|+|||++..+..
T Consensus 117 l~~lH~~~i~H~dlkp~nil~~~~--~~~kl~df~~~~~~~~ 156 (263)
T cd05052 117 MEYLEKKNFIHRDLAARNCLVGEN--HLVKVADFGLSRLMTG 156 (263)
T ss_pred HHHHHhCCEeecccCcceEEEcCC--CcEEeCCCcccccccc
Confidence 678899999999999999999865 8999999999876653
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.21 E-value=7e-11 Score=124.96 Aligned_cols=144 Identities=19% Similarity=0.159 Sum_probs=97.8
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.++|++|++|+||+|+.. +|+.|+||......... .+ .. ++.+|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~---------------------------~~------~~~~e 49 (254)
T cd06627 5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKE--EA---------------------------LK------SIMQE 49 (254)
T ss_pred eeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCH--HH---------------------------HH------HHHHH
Confidence 378999999999999976 78999999876432110 00 00 13345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
++.+.++++ +. +.+..... ....+++|||++|.+|.++.... ...+...+...+.+++
T Consensus 50 ~~~l~~l~~------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~ 110 (254)
T cd06627 50 IDLLKNLKH------------------PNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQ 110 (254)
T ss_pred HHHHHhCCC------------------CCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHH
Confidence 554444422 11 12222222 45678999999999998875422 3345555444444444
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
+..+|..|++|+|++|+||+++.+ +.++|+|||++..+....
T Consensus 111 ~l~~lH~~~i~H~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 111 GLAYLHEQGVIHRDIKAANILTTKD--GVVKLADFGVATKLNDVS 153 (254)
T ss_pred HHHHHhhCCcccCCCCHHHEEECCC--CCEEEeccccceecCCCc
Confidence 678999999999999999999864 899999999998876543
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.21 E-value=6.6e-11 Score=125.72 Aligned_cols=141 Identities=16% Similarity=0.145 Sum_probs=92.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++|+.|++|.||+|+.+ +|+.||||......... ... -.+.+|.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~---------------------------------~~~~~e~ 50 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASR--RER---------------------------------KAAEQEA 50 (257)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCH--HHH---------------------------------HHHHHHH
Confidence 67999999999999976 78999999754211100 000 0123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe--cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ--SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~ 165 (864)
+.+.++++ +. +.+...+. ....+++|||++|.+|.+...... .......+...+.+++
T Consensus 51 ~~l~~l~~------------------~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~ 112 (257)
T cd08223 51 QLLSQLKH------------------PNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIA 112 (257)
T ss_pred HHHHhCCC------------------CCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 44444322 11 12222222 223579999999999987754322 2245555555554444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 113 ~~l~~lH~~~i~H~di~p~nil~~~~--~~~~l~df~~~~~~~ 153 (257)
T cd08223 113 MALQYLHEKHILHRDLKTQNVFLTRT--NIIKVGDLGIARVLE 153 (257)
T ss_pred HHHHHHHhCCeeccCCCchhEEEecC--CcEEEecccceEEec
Confidence 788999999999999999999865 899999999987664
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.21 E-value=6.7e-11 Score=126.96 Aligned_cols=143 Identities=17% Similarity=0.146 Sum_probs=95.4
Q ss_pred ccccccccceeeEEEEecC----CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 10 ETPLATASIAQVHRATLVD----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
.+.||.|++|.||+|+..+ ...|+||+.+........ -.+
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~------------------------------------~~~ 54 (270)
T cd05056 11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVR------------------------------------EKF 54 (270)
T ss_pred eeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHH------------------------------------HHH
Confidence 3689999999999999753 246899976543321100 013
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
.+|+..+.++.+. .-+.+..+......+++|||++|.+|.++........+...+...+.+++
T Consensus 55 ~~e~~~l~~~~h~-----------------~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~ 117 (270)
T cd05056 55 LQEAYIMRQFDHP-----------------HIVKLIGVITENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLS 117 (270)
T ss_pred HHHHHHHHhCCCC-----------------chhceeEEEcCCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 4455555554221 01222222235667899999999999887643333345555444444433
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 118 ~~l~~lH~~~~~H~dl~p~nili~~~--~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 118 TALAYLESKRFVHRDIAARNVLVSSP--DCVKLGDFGLSRYLED 159 (270)
T ss_pred HHHHHHHhCCeeccccChheEEEecC--CCeEEccCceeeeccc
Confidence 778899999999999999999865 8999999999877654
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.21 E-value=5.1e-11 Score=129.39 Aligned_cols=142 Identities=19% Similarity=0.208 Sum_probs=93.8
Q ss_pred cccccccceeeEEEEec----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.|+.|++|.||+|+.. +|+.||+|+.+......-. ...+ .+.
T Consensus 6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~---------------------------~~~~------~~~ 52 (290)
T cd05613 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKA---------------------------KTTE------HTR 52 (290)
T ss_pred eeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcc---------------------------hHHH------HHH
Confidence 56999999999999963 7899999986532110000 0000 122
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
.|.+.+.++.+ + ..|+.++ . ....++||||++|.+|.+.... ........+...+.
T Consensus 53 ~e~~~l~~l~~-----------------~--~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~ 112 (290)
T cd05613 53 TERQVLEHIRQ-----------------S--PFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQ-RERFKEQEVQIYSG 112 (290)
T ss_pred HHHHHHHhccc-----------------C--CChhceeeEeecCCeEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHH
Confidence 34444444432 1 1122222 2 3456799999999999877542 23345555554443
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+++ +..+|..|++|+|++|.||+++.+ ++++|+|||++..+..
T Consensus 113 qi~~al~~lH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~~~~ 157 (290)
T cd05613 113 EIVLALEHLHKLGIIYRDIKLENILLDSN--GHVVLTDFGLSKEFHE 157 (290)
T ss_pred HHHHHHHHHHhCCeeccCCCHHHeEECCC--CCEEEeeCccceeccc
Confidence 433 788999999999999999999865 8999999999887654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.21 E-value=8.8e-11 Score=124.82 Aligned_cols=141 Identities=16% Similarity=0.183 Sum_probs=94.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|+||+++.. +|+.||+|..+........ + ++..|.
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~---~---------------------------------~~~~e~ 49 (255)
T cd08219 6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAV---E---------------------------------DSRKEA 49 (255)
T ss_pred EEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHH---H---------------------------------HHHHHH
Confidence 67999999999999976 7999999986522111000 0 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH-
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~- 165 (864)
..+.++.+ ++ +.+...+. ....+++|||++|.+|.+...... .......+...+.+++
T Consensus 50 ~~l~~l~h------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~ 111 (255)
T cd08219 50 VLLAKMKH------------------PNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCL 111 (255)
T ss_pred HHHHhCCC------------------CCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 43333321 11 22223333 566889999999999877653222 2244555544444443
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 112 al~~lH~~~i~H~dl~p~nili~~~--~~~~l~dfg~~~~~~~ 152 (255)
T cd08219 112 GVQHIHEKRVLHRDIKSKNIFLTQN--GKVKLGDFGSARLLTS 152 (255)
T ss_pred HHHHHhhCCcccCCCCcceEEECCC--CcEEEcccCcceeecc
Confidence 788999999999999999999865 8999999999876654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.9e-11 Score=127.65 Aligned_cols=77 Identities=21% Similarity=0.277 Sum_probs=58.9
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+++|||++|.+|.++.... ...+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 65 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~--~~~~l~dfg~~~ 141 (265)
T cd05579 65 KKNLYLVMEYLPGGDLASLLENV-GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSN--GHLKLTDFGLSK 141 (265)
T ss_pred CcEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCC--CCEEEEecccch
Confidence 34568999999999998775422 2345555554444444 778899999999999999999865 899999999876
Q ss_pred cc
Q 002927 204 KL 205 (864)
Q Consensus 204 ~l 205 (864)
..
T Consensus 142 ~~ 143 (265)
T cd05579 142 VG 143 (265)
T ss_pred hc
Confidence 54
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.21 E-value=5e-11 Score=130.24 Aligned_cols=137 Identities=15% Similarity=0.200 Sum_probs=94.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.. +|+.||||.......... -.+.+|.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-------------------------------------~~~~~e~ 67 (297)
T cd06656 25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKK-------------------------------------ELIINEI 67 (297)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEEEecCccchH-------------------------------------HHHHHHH
Confidence 56999999999999975 899999997643211100 0023344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+..+. +++ +.+++ . ....++||||++|.+|.++.. ........+...+.+++
T Consensus 68 ~~l~~~~------------------h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~l~ 125 (297)
T cd06656 68 LVMRENK------------------NPN--IVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECL 125 (297)
T ss_pred HHHHhCC------------------CCC--EeeEEEEEecCCEEEEeecccCCCCHHHHHH--hCCCCHHHHHHHHHHHH
Confidence 4333322 122 22232 2 456889999999999988743 33345555555444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+.+.
T Consensus 126 ~~L~~LH~~~i~H~dL~p~Nili~~~--~~~~l~Dfg~~~~~~~~ 168 (297)
T cd06656 126 QALDFLHSNQVIHRDIKSDNILLGMD--GSVKLTDFGFCAQITPE 168 (297)
T ss_pred HHHHHHHHCCcccCCCCHHHEEECCC--CCEEECcCccceEccCC
Confidence 778899999999999999999865 89999999998776543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.21 E-value=6.8e-11 Score=129.48 Aligned_cols=143 Identities=17% Similarity=0.222 Sum_probs=92.4
Q ss_pred ccccccccceeeEEEEec--------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 10 ETPLATASIAQVHRATLV--------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~--------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
.++||+|++|.||+|+.. ++..||||+.+......-..
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~---------------------------------- 65 (304)
T cd05101 20 GKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLS---------------------------------- 65 (304)
T ss_pred cceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHH----------------------------------
Confidence 378999999999999741 35689999876443211000
Q ss_pred hccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhc---------
Q 002927 82 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF--------- 150 (864)
Q Consensus 82 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~--------- 150 (864)
++.+|...+.++.. ++. +.+...+. ....+|+|||++|.+|.++......
T Consensus 66 --~~~~E~~~l~~l~~-----------------h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 126 (304)
T cd05101 66 --DLVSEMEMMKMIGK-----------------HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 126 (304)
T ss_pred --HHHHHHHHHHhhcc-----------------CCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCccccccccc
Confidence 13334444444421 111 11222222 4557899999999999887543211
Q ss_pred ------CCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 151 ------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 151 ------~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+....+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 127 ~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~--~~~kl~D~g~~~~~~~ 189 (304)
T cd05101 127 ARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTEN--NVMKIADFGLARDVNN 189 (304)
T ss_pred ccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCC--CcEEECCCccceeccc
Confidence 123333444333333 778999999999999999999865 8999999999887643
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.21 E-value=1e-10 Score=125.47 Aligned_cols=138 Identities=14% Similarity=0.111 Sum_probs=94.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
..||.|++|.||+|+.. +++.|+||.......... -.+.+|+
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~-------------------------------------~~~~~e~ 56 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYV-------------------------------------QPLHEEI 56 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHH-------------------------------------HHHHHHH
Confidence 68999999999999965 788999997654432210 0134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCC--CHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGV--NKQKVVEEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~--~~~~l~~~~~~ 163 (864)
+.+.++++ +. |.+++. ....+++|||++|.+|.++........ +...+...+.+
T Consensus 57 ~~l~~l~h------------------~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~q 116 (268)
T cd06624 57 ALHSYLKH------------------RN--IVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQ 116 (268)
T ss_pred HHHHhcCC------------------CC--eeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHH
Confidence 55555432 11 222322 456789999999999988754322222 44444443333
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+. +..+|..|++|+|+||.||+++.+ ++.++|+|||++..+.
T Consensus 117 i~~al~~lH~~~i~h~dl~p~nil~~~~-~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 117 ILEGLKYLHDNQIVHRDIKGDNVLVNTY-SGVVKISDFGTSKRLA 160 (268)
T ss_pred HHHHHHHHHHCCEeecCCCHHHEEEcCC-CCeEEEecchhheecc
Confidence 33 778899999999999999999753 4789999999887653
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.21 E-value=7.5e-11 Score=127.61 Aligned_cols=137 Identities=17% Similarity=0.162 Sum_probs=95.0
Q ss_pred cccccccceeeEEEEe-----cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l-----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||.|++|+||+++. .+++.||||+.+....... +-.|
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~ 53 (283)
T cd05080 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQN------------------------------------TSGW 53 (283)
T ss_pred eecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHH------------------------------------HHHH
Confidence 6799999999988653 2688999998765422110 0113
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 159 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~ 159 (864)
.+|++.+.++.+ +. +++++. ....+++|||++|.+|.++.. ....+...+..
T Consensus 54 ~~E~~~l~~l~h------------------~~--i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~l~~~~~~~ 111 (283)
T cd05080 54 KKEINILKTLYH------------------EN--IVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLP--KHKLNLAQLLL 111 (283)
T ss_pred HHHHHHHHhCCC------------------CC--EeeEEEEEecCCCceEEEEecCCCCCCHHHHHH--HcCCCHHHHHH
Confidence 445555555422 22 223322 123679999999999988753 33466666666
Q ss_pred HHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 160 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 160 ~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+.+++ +..+|..|++|+|+||.||+++.+ +.++|.|||++..+..
T Consensus 112 i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~--~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 112 FAQQICEGMAYLHSQHYIHRDLAARNVLLDND--RLVKIGDFGLAKAVPE 159 (283)
T ss_pred HHHHHHHHHHHHHHCCeeccccChheEEEcCC--CcEEEeecccccccCC
Confidence 555544 788999999999999999999865 8899999999876653
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.21 E-value=7.8e-11 Score=129.45 Aligned_cols=140 Identities=19% Similarity=0.156 Sum_probs=94.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||+|+.+........ . ++.+|+
T Consensus 7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------~------~~~~E~ 50 (308)
T cd06615 7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIR------------------------------N------QIIREL 50 (308)
T ss_pred eeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHH------------------------------H------HHHHHH
Confidence 67999999999999976 7899999987644321110 0 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.+. .-+.+...+. ....+|+|||++|.+|.++.... ..+....+...+.+++ +
T Consensus 51 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l 112 (308)
T cd06615 51 KVLHECNSP-----------------YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPENILGKISIAVLRGL 112 (308)
T ss_pred HHHHhCCCC-----------------CCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence 555554321 1122333333 56678999999999998875422 2334443333333333 6
Q ss_pred HHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+|. .|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 113 ~~lH~~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~ 151 (308)
T cd06615 113 TYLREKHKIMHRDVKPSNILVNSR--GEIKLCDFGVSGQLI 151 (308)
T ss_pred HHHHhhCCEEECCCChHHEEEecC--CcEEEccCCCccccc
Confidence 77886 699999999999999865 889999999886553
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.21 E-value=6.7e-11 Score=129.15 Aligned_cols=138 Identities=19% Similarity=0.199 Sum_probs=91.1
Q ss_pred ccccccccceeeEEEEec-CCC--EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 10 ETPLATASIAQVHRATLV-DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
.+.||.|++|+||+|+++ +|. .|++|+.+....... .-+|.
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~------------------------------------~~~~~ 50 (297)
T cd05089 7 EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASEND------------------------------------HRDFA 50 (297)
T ss_pred eeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHH------------------------------------HHHHH
Confidence 368999999999999976 454 478887553221110 01244
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh-------------
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA------------- 149 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~------------- 149 (864)
+|...+.++.+ ++ .+.+++. ....+++|||+++.+|.++.....
T Consensus 51 ~E~~~l~~l~~-----------------hp--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 111 (297)
T cd05089 51 GELEVLCKLGH-----------------HP--NIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHG 111 (297)
T ss_pred HHHHHHHhhcC-----------------CC--chhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccC
Confidence 56666655521 11 1223322 456789999999999987753211
Q ss_pred --cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 150 --FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 150 --~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
.......+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..
T Consensus 112 ~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~--~~~kl~dfg~~~~ 168 (297)
T cd05089 112 TASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGEN--LASKIADFGLSRG 168 (297)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCC--CeEEECCcCCCcc
Confidence 1133344444444443 788999999999999999999865 8899999998753
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=4e-11 Score=139.78 Aligned_cols=142 Identities=16% Similarity=0.091 Sum_probs=85.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.. +++.||||+.+.... ... . +..|.
T Consensus 135 ~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~--~~~------------------------------~------~~~e~ 176 (467)
T PTZ00284 135 SLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK--YTR------------------------------D------AKIEI 176 (467)
T ss_pred EEEEeccCEEEEEEEEcCCCeEEEEEEEecchh--hHH------------------------------H------HHHHH
Confidence 57999999999999975 789999998753110 000 0 11122
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCC-CCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYE-VDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~-~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
..++++++.-. ... ..+.+...+. ....+||||++ |..|.++.. ....+....+...+.+++
T Consensus 177 ~~l~~l~~~~~------------~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~-~~~~l~~~~~~~i~~qi~~ 242 (467)
T PTZ00284 177 QFMEKVRQADP------------ADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIM-KHGPFSHRHLAQIIFQTGV 242 (467)
T ss_pred HHHHHHhhcCc------------ccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHH-HcCCCCHHHHHHHHHHHHH
Confidence 23333322100 001 1122223332 34578999988 555555432 222345555555444443
Q ss_pred -HHHHHh-cCeeccCCCCCCeEEccCC--------------CCceEEEecccccc
Q 002927 166 -AHQIYV-DGFFNGDPHPGNFLVSKDP--------------PHRPILLDFGLTKK 204 (864)
Q Consensus 166 -l~~i~~-~G~~H~D~hPgNIlv~~~~--------------~g~i~LiDFG~~~~ 204 (864)
+..+|. .||+||||||+|||++.++ .++++|+|||.+..
T Consensus 243 aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~ 297 (467)
T PTZ00284 243 ALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCD 297 (467)
T ss_pred HHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCcccc
Confidence 788997 5999999999999998541 12599999997653
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.2e-10 Score=123.11 Aligned_cols=146 Identities=14% Similarity=0.168 Sum_probs=95.0
Q ss_pred cccc-cccceeeEEEEecCCCEEEEEEe-cCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLA-TASIAQVHRATLVDGRQVVVKVQ-HQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~pla-saSigqV~~A~l~~G~~VAVKv~-~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
..|| .|+.|.||+... +|+.+|||.- ++++...+..+- +.. .....-.+.+|
T Consensus 37 ~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~----------------~~~---------~~~~~~r~~rE 90 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDR----------------YLF---------TGLERTRAFAE 90 (239)
T ss_pred ceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhc----------------ccc---------cchhhhHHHHH
Confidence 4576 899999999987 5889999975 344432221110 000 00112235667
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-----cC---CceEEEeecCC-cCCCChHHHhhcCCCHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SS---ETVLILEFMDG-IRLNDCESLEAFGVNKQKVVE 159 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~---~~vLvmE~i~G-~~L~~~~~~~~~~~~~~~l~~ 159 (864)
.+.+.++++. ++.+|+++. .. +.+|+|||++| .+|.++.. ....+. +...
T Consensus 91 ~~ll~~L~~~------------------gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~--~~~l~~-~~~~ 149 (239)
T PRK01723 91 FRLLAQLYEA------------------GLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQ--EAPLSE-EQWQ 149 (239)
T ss_pred HHHHHHHHhC------------------CCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHh--cCCCCH-HHHH
Confidence 8888887652 344565543 11 23599999998 67766532 222333 3344
Q ss_pred HHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 160 EITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 160 ~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+++ .+..+|..|++|+|+||+|||++.+ ++++|||||.+..-.
T Consensus 150 ~i~~-~l~~lH~~GI~HrDlkp~NILv~~~--~~v~LIDfg~~~~~~ 193 (239)
T PRK01723 150 AIGQ-LIARFHDAGVYHADLNAHNILLDPD--GKFWLIDFDRGELRT 193 (239)
T ss_pred HHHH-HHHHHHHCCCCCCCCCchhEEEcCC--CCEEEEECCCcccCC
Confidence 4443 4889999999999999999999864 789999999887655
|
|
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.21 E-value=7.9e-11 Score=127.43 Aligned_cols=138 Identities=17% Similarity=0.221 Sum_probs=90.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.+ +|+.||||+.++.... .. ++..|.
T Consensus 24 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~--~~------------------------------------~~~~e~ 65 (286)
T cd06638 24 ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDI--DE------------------------------------EIEAEY 65 (286)
T ss_pred eeeccCCCcEEEEEEECCCCceeEEEeeccccch--HH------------------------------------HHHHHH
Confidence 68999999999999976 7899999986542110 00 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---------cCCceEEEeecCCcCCCChHHHh---hcCCCHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------SSETVLILEFMDGIRLNDCESLE---AFGVNKQKV 157 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---------~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l 157 (864)
+.+.++.+ ++ .+++++. ....+|+|||++|.+|.++.... ....+...+
T Consensus 66 ~~l~~l~~-----------------h~--~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 126 (286)
T cd06638 66 NILKALSD-----------------HP--NVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPII 126 (286)
T ss_pred HHHHHHhc-----------------CC--CeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHH
Confidence 44444421 11 1222221 23468999999999998764311 112333333
Q ss_pred HHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 158 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 158 ~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 127 ~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~--~~~kl~dfg~~~~~~~ 176 (286)
T cd06638 127 AYILHEALMGLQHLHVNKTIHRDVKGNNILLTTE--GGVKLVDFGVSAQLTS 176 (286)
T ss_pred HHHHHHHHHHHHHHHhCCccccCCCHHhEEECCC--CCEEEccCCceeeccc
Confidence 33333322 678899999999999999999865 7899999999877643
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.20 E-value=5e-11 Score=128.78 Aligned_cols=137 Identities=18% Similarity=0.193 Sum_probs=93.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|+||+|+.. +|+.||||+.+....... .-.+.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~------------------------------------~~~~~~E~ 49 (284)
T cd07836 6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGT------------------------------------PSTAIREI 49 (284)
T ss_pred eeeccCCceEEEEEEECCCCeEEEEEEecccccccc------------------------------------hHHHHHHH
Confidence 67999999999999986 799999998764321100 00123355
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh--cCCCHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~--~~~~~~~l~~~~~~ 163 (864)
..+.++.+ + .+++++. ....+|||||++| +|.++..... ..++...+...+.+
T Consensus 50 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~q 108 (284)
T cd07836 50 SLMKELKH------------------E--NIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQ 108 (284)
T ss_pred HHHHhhcC------------------C--CEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHH
Confidence 55555532 1 2334432 4567999999997 5655433211 23455555555555
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
++ +..+|..|++|+|++|.||+++++ +.++|+|||++..+.
T Consensus 109 i~~~l~~lH~~~i~h~dl~p~ni~~~~~--~~~~l~d~g~~~~~~ 151 (284)
T cd07836 109 LLKGIAFCHENRVLHRDLKPQNLLINKR--GELKLADFGLARAFG 151 (284)
T ss_pred HHHHHHHHHHCCeeeCCCCHHHEEECCC--CcEEEeecchhhhhc
Confidence 44 778899999999999999999865 899999999887553
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.5e-11 Score=129.69 Aligned_cols=79 Identities=23% Similarity=0.259 Sum_probs=58.8
Q ss_pred cCCceEEEeecCCcCCCChHHHhhc----------CCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAF----------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHR 193 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~----------~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~ 193 (864)
....+++|||++|.+|.++...... ..+...+...+.++. +..+|..|++|+|+||.||+++.+ +.
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~--~~ 168 (296)
T cd05095 91 SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKN--YT 168 (296)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCC--CC
Confidence 4567899999999999877542211 122334444444433 788999999999999999999865 89
Q ss_pred eEEEecccccccC
Q 002927 194 PILLDFGLTKKLS 206 (864)
Q Consensus 194 i~LiDFG~~~~l~ 206 (864)
++|+|||++..+.
T Consensus 169 ~~l~dfg~~~~~~ 181 (296)
T cd05095 169 IKIADFGMSRNLY 181 (296)
T ss_pred EEeccCccccccc
Confidence 9999999987653
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.1e-10 Score=124.20 Aligned_cols=138 Identities=17% Similarity=0.174 Sum_probs=94.1
Q ss_pred ccccccceeeEEEEec--C--CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 12 PLATASIAQVHRATLV--D--GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 12 plasaSigqV~~A~l~--~--G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
-||.|++|+||+|+.. + +..||+|+.+...... .+-++.+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~------------------------------------~~~~~~~ 45 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAA------------------------------------GKKEFLR 45 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccchH------------------------------------HHHHHHH
Confidence 4899999999999864 2 3789999876443210 0112334
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
|.+.+.++.+ +. +.+..+......+++|||++|.+|.++.... .......+...+.+++
T Consensus 46 e~~~l~~l~h------------------~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~ 106 (257)
T cd05060 46 EASVMAQLDH------------------PCIVRLIGVCKGEPLMLVMELAPLGPLLKYLKKR-REIPVSDLKELAHQVAM 106 (257)
T ss_pred HHHHHHhcCC------------------CCeeeEEEEEcCCceEEEEEeCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHH
Confidence 5544444321 11 2222222355678999999999998875422 2355555555555554
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 107 ~l~~lh~~~i~H~di~p~nili~~~--~~~kl~df~~~~~~~ 146 (257)
T cd05060 107 GMAYLESKHFVHRDLAARNVLLVNR--HQAKISDFGMSRALG 146 (257)
T ss_pred HHHHHhhcCeeccCcccceEEEcCC--CcEEeccccccceee
Confidence 778899999999999999999865 899999999987664
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.7e-11 Score=140.18 Aligned_cols=80 Identities=19% Similarity=0.296 Sum_probs=54.9
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCC------------------HHHHH-HHHHHH--HHHHHHhcCeeccCCCCCCe
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVN------------------KQKVV-EEITRA--YAHQIYVDGFFNGDPHPGNF 184 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~------------------~~~l~-~~~~~~--~l~~i~~~G~~H~D~hPgNI 184 (864)
....+|||||+++.+|.++......... ...++ ..+.++ .+.++|..||+|||+||.||
T Consensus 207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NI 286 (566)
T PLN03225 207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNI 286 (566)
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHE
Confidence 3456899999999999877542211000 01111 122222 27789999999999999999
Q ss_pred EEccCCCCceEEEecccccccC
Q 002927 185 LVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 185 lv~~~~~g~i~LiDFG~~~~l~ 206 (864)
|++.+ ++.++|+|||+++.+.
T Consensus 287 Ll~~~-~~~~KL~DFGlA~~l~ 307 (566)
T PLN03225 287 IFSEG-SGSFKIIDLGAAADLR 307 (566)
T ss_pred EEeCC-CCcEEEEeCCCccccc
Confidence 99853 4789999999987553
|
|
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.1e-10 Score=124.25 Aligned_cols=138 Identities=20% Similarity=0.211 Sum_probs=94.4
Q ss_pred ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 10 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.+.||+|++|.||+|.. .|+.||||..+.... . . + .+.+|.
T Consensus 11 ~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~----~---------------------------~------~~~~e~ 51 (256)
T cd05039 11 GATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-A----A---------------------------Q------AFLAEA 51 (256)
T ss_pred eeeeecCCCceEEEEEe-cCcEEEEEEeccchh-H----H---------------------------H------HHHHHH
Confidence 36799999999999996 589999998754322 0 0 0 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhc-CCCHHHHHHHHHHHH-
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITRAY- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~-~~~~~~l~~~~~~~~- 165 (864)
..+.++.+ +. +.+...+. ....+++|||++|.+|.++...... ......+...+.+++
T Consensus 52 ~~l~~l~~------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~ 113 (256)
T cd05039 52 SVMTTLRH------------------PNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCE 113 (256)
T ss_pred HHHHhcCC------------------cceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 44444322 11 22222222 5678899999999999887543221 244445544444443
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||+||+++.+ +.++|+|||.+....
T Consensus 114 ~l~~lh~~~i~H~di~p~Nili~~~--~~~~l~d~g~~~~~~ 153 (256)
T cd05039 114 GMEYLEEKNFVHRDLAARNVLVSED--LVAKVSDFGLAKEAS 153 (256)
T ss_pred HHHHHHhCCccchhcccceEEEeCC--CCEEEcccccccccc
Confidence 778999999999999999999865 899999999988764
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.1e-10 Score=124.92 Aligned_cols=145 Identities=15% Similarity=0.128 Sum_probs=95.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
..|+.|++|+||+|... +++.||||+.+..-...... ....++.+ ++.+|+
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~----------------------~~~~~~~~------~~~~e~ 57 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSK----------------------DRKRSMLD------ALAREI 57 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchh----------------------HHHHHHHH------HHHHHH
Confidence 67999999999999975 78999999865432111000 00011111 234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++.+ + .+++++. ....+++|||++|.+|.++.... ...+...+...+.+++
T Consensus 58 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~ 116 (267)
T cd06628 58 ALLKELQH------------------E--NIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQIL 116 (267)
T ss_pred HHHHhcCC------------------C--CeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHH
Confidence 55555432 1 2333332 56678999999999998775422 2234434333333333
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|.||+++++ +.++|+|||++..+.
T Consensus 117 ~~l~~lH~~~ivH~di~p~nil~~~~--~~~~l~dfg~~~~~~ 157 (267)
T cd06628 117 KGLNYLHNRGIIHRDIKGANILVDNK--GGIKISDFGISKKLE 157 (267)
T ss_pred HHHHHHHhcCcccccCCHHHEEEcCC--CCEEecccCCCcccc
Confidence 678899999999999999999855 899999999988765
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.9e-11 Score=126.46 Aligned_cols=142 Identities=18% Similarity=0.159 Sum_probs=94.5
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+.|+.|++|.||+|+.. +|+.||||..++-.... . ..+.++.+|
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~----~------------------------------~~~~~~~~e 52 (267)
T cd08228 7 EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMD----A------------------------------KARQDCVKE 52 (267)
T ss_pred eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCC----H------------------------------HHHHHHHHH
Confidence 367999999999999976 89999999754311000 0 011124445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHh---hcCCCHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEI 161 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l~~~~ 161 (864)
.+.+.++.+ + .+++++ . ....+++|||++|.+|.++.... ....+...+...+
T Consensus 53 ~~~l~~l~h------------------~--~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 112 (267)
T cd08228 53 IDLLKQLNH------------------P--NVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYF 112 (267)
T ss_pred HHHHHhCCC------------------c--ceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHH
Confidence 554444422 1 222332 2 45678999999999998765321 1123444444444
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.++. +..+|+.|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 113 ~~i~~~l~~LH~~~i~H~dl~~~nil~~~~--~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 113 VQLCSAVEHMHSRRVMHRDIKPANVFITAT--GVVKLGDLGLGRFFSS 158 (267)
T ss_pred HHHHHHHHHHhhCCeeCCCCCHHHEEEcCC--CCEEECccccceeccc
Confidence 3333 678899999999999999999865 8899999999887654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.3e-11 Score=130.46 Aligned_cols=144 Identities=16% Similarity=0.184 Sum_probs=88.8
Q ss_pred cccccccccccccceeeEEEEec---CCCEEEEEEecCC-hHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhH
Q 002927 5 FMDFVETPLATASIAQVHRATLV---DGRQVVVKVQHQG-IKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 80 (864)
Q Consensus 5 F~~fd~~plasaSigqV~~A~l~---~G~~VAVKv~~p~-i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~ 80 (864)
|+.. ...||.|++|.||+|+.+ +++.||||+.+.. ....
T Consensus 2 ~~~~-~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~------------------------------------ 44 (317)
T cd07868 2 FEYE-GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMS------------------------------------ 44 (317)
T ss_pred cccc-ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHH------------------------------------
Confidence 4433 467999999999999965 5689999976532 1111
Q ss_pred hhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhh--------
Q 002927 81 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEA-------- 149 (864)
Q Consensus 81 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~-------- 149 (864)
..+|++.+.++.+. .-+.+..++. ....+++|||+++ .+.++.....
T Consensus 45 ----~~~E~~~l~~l~h~-----------------niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~ 102 (317)
T cd07868 45 ----ACREIALLRELKHP-----------------NVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKP 102 (317)
T ss_pred ----HHHHHHHHHhcCCC-----------------CCcceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCc
Confidence 22355555544321 1122333332 2335799999976 4444432111
Q ss_pred cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccC--CCCceEEEecccccccCh
Q 002927 150 FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 150 ~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~~ 207 (864)
..+....+...+.+++ +..+|+.|++|||+||.|||+..+ .++.++|+|||++..++.
T Consensus 103 ~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~ 164 (317)
T cd07868 103 VQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 164 (317)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCC
Confidence 1233333333333333 778899999999999999999532 247899999999876543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.20 E-value=8.8e-11 Score=126.62 Aligned_cols=138 Identities=17% Similarity=0.217 Sum_probs=90.9
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||.|++|+||+|+.+ +++.||||+.+...... ...+
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~------------------------------------~~~~ 55 (277)
T cd05062 12 RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMR------------------------------------ERIE 55 (277)
T ss_pred eeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHH------------------------------------HHHH
Confidence 67999999999999853 35789999765322110 0011
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhc---------C
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF---------G 151 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~---------~ 151 (864)
|.+|+..+.++++ +. |.+++. .+..++||||++|.+|.++...... .
T Consensus 56 ~~~e~~~l~~l~~------------------~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ 115 (277)
T cd05062 56 FLNEASVMKEFNC------------------HH--VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAP 115 (277)
T ss_pred HHHHHHHHHhCCC------------------CC--eeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccC
Confidence 3445544443321 12 233332 4668899999999999887542111 1
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 152 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 152 ~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+...+...+.+++ +..+|..|++|+|+||.||+++++ +.++|+|||++..+.
T Consensus 116 ~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~--~~~~l~dfg~~~~~~ 170 (277)
T cd05062 116 PSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED--FTVKIGDFGMTRDIY 170 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCC--CCEEECCCCCccccC
Confidence 23334444433333 778999999999999999999965 899999999987653
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.20 E-value=7.3e-11 Score=129.47 Aligned_cols=141 Identities=19% Similarity=0.237 Sum_probs=94.0
Q ss_pred cccccccceeeEEEEec--------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhh
Q 002927 11 TPLATASIAQVHRATLV--------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 82 (864)
Q Consensus 11 ~plasaSigqV~~A~l~--------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 82 (864)
++||+|++|.||+|+.. ++..||+|+.++..... +.
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~---~~--------------------------------- 67 (307)
T cd05098 24 KPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEK---DL--------------------------------- 67 (307)
T ss_pred eeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChH---HH---------------------------------
Confidence 78999999999999852 23579999887653211 00
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-----------
Q 002927 83 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA----------- 149 (864)
Q Consensus 83 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~----------- 149 (864)
-++..|...+.++.. ++. +.+...+. ....+++|||++|.+|.++.....
T Consensus 68 ~~~~~e~~~l~~l~~-----------------h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~ 130 (307)
T cd05098 68 SDLISEMEMMKMIGK-----------------HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPT 130 (307)
T ss_pred HHHHHHHHHHHHhcC-----------------CCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccc
Confidence 013334444444421 111 22222222 456889999999999988764321
Q ss_pred ----cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 150 ----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 150 ----~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.......+...+.+++ +..+|+.|++|+|+||.||+++.+ +.++|+|||.+..+.
T Consensus 131 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~--~~~kL~dfg~a~~~~ 191 (307)
T cd05098 131 QVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED--NVMKIADFGLARDIH 191 (307)
T ss_pred cCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCC--CcEEECCCccccccc
Confidence 1234444555555444 788999999999999999999865 899999999987654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.20 E-value=1e-10 Score=127.10 Aligned_cols=140 Identities=16% Similarity=0.206 Sum_probs=92.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.+ +|+.||||+..+.-.. . . .+.+|.
T Consensus 28 ~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~--~------------------------------~------~~~~e~ 69 (291)
T cd06639 28 ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDV--D------------------------------E------EIEAEY 69 (291)
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEecccccH--H------------------------------H------HHHHHH
Confidence 57999999999999975 7999999987542110 0 0 022344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe------cCCceEEEeecCCcCCCChHHH---hhcCCCHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ------SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVE 159 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~------~~~~vLvmE~i~G~~L~~~~~~---~~~~~~~~~l~~ 159 (864)
..+.++.+ +++ +.+...+. ....++||||++|.+|.++... .........+..
T Consensus 70 ~~l~~l~~-----------------h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~ 132 (291)
T cd06639 70 NILQSLPN-----------------HPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISY 132 (291)
T ss_pred HHHHHhcC-----------------CCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHH
Confidence 44444321 111 12222221 1357899999999999886532 112334444444
Q ss_pred HHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 160 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 160 ~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+.+++ ++.+|..|++|+|+||+||+++.+ ++++|+|||++..+..
T Consensus 133 ~~~qi~~al~~lH~~~ivH~dlkp~nili~~~--~~~kl~dfg~~~~~~~ 180 (291)
T cd06639 133 ILYGALLGLQHLHNNRIIHRDVKGNNILLTTE--GGVKLVDFGVSAQLTS 180 (291)
T ss_pred HHHHHHHHHHHHHhCCeeccCCCHHHEEEcCC--CCEEEeecccchhccc
Confidence 444433 788999999999999999999865 8899999999876643
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.2e-11 Score=130.49 Aligned_cols=141 Identities=16% Similarity=0.188 Sum_probs=95.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.. +|+.||||...+...... ... -.+..|.
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~-~~~---------------------------------~~~~~e~ 52 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKR-NKV---------------------------------KRVLTEQ 52 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccchH-HHH---------------------------------HHHHHHH
Confidence 67999999999999976 699999998765321110 000 0133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~ 164 (864)
+.+.++.+ ..|++++. ....+++|||+.|.+|.++..... ..++...+...+.++
T Consensus 53 ~~l~~l~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi 112 (316)
T cd05574 53 EILATLDH--------------------PFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEV 112 (316)
T ss_pred HHHHhCCC--------------------CCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHH
Confidence 54444421 12333332 456789999999999988754221 234444444433343
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+|..|++|+|+||.||+++.+ +.++|+|||++.....
T Consensus 113 ~~~l~~lH~~~i~H~dlkp~Nili~~~--~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 113 LLALEYLHLLGIVYRDLKPENILLHES--GHIMLSDFDLSKQSDV 155 (316)
T ss_pred HHHHHHHHHCCeeccCCChHHeEEcCC--CCEEEeecchhhcccc
Confidence 3 778899999999999999999865 8999999999876643
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.5e-11 Score=127.71 Aligned_cols=140 Identities=18% Similarity=0.169 Sum_probs=95.1
Q ss_pred cccccccceeeEEEEecC------CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLVD------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||.|++|.||+|...+ +..|++|......... .+.+
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~------------------------------------~~~~ 55 (277)
T cd05036 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQ------------------------------------DESD 55 (277)
T ss_pred eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHH------------------------------------HHHH
Confidence 689999999999999753 5678999765432211 1223
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhc------CCCH
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF------GVNK 154 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~------~~~~ 154 (864)
|.+|...+.++.+ + .|.+++. ....+++|||++|.+|.++...... ..+.
T Consensus 56 ~~~e~~~l~~l~~------------------~--~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~ 115 (277)
T cd05036 56 FLMEALIMSKFNH------------------Q--NIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTM 115 (277)
T ss_pred HHHHHHHHHhCCC------------------C--CEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCH
Confidence 5556655555432 1 2223332 4567899999999999887543221 2444
Q ss_pred HHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCC-CCceEEEecccccccC
Q 002927 155 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLS 206 (864)
Q Consensus 155 ~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~ 206 (864)
..+...+.+++ +..+|..|++|+|+||+||+++.++ +..++|+|||++..+.
T Consensus 116 ~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~ 170 (277)
T cd05036 116 KDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIY 170 (277)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccC
Confidence 55555554444 7788999999999999999998542 2358999999988763
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.20 E-value=7.5e-11 Score=126.17 Aligned_cols=140 Identities=19% Similarity=0.160 Sum_probs=93.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|+||+|+.+ +|+.||||.....-.. +.+ ...++.+|.
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~----~~~------------------------------~~~~~~~e~ 53 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLM----DAK------------------------------ARADCIKEI 53 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehhhh----hHH------------------------------HHHHHHHHH
Confidence 67999999999999965 8999999965421000 000 011244455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHh---hcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l~~~~~ 162 (864)
+.+..+.+ + .+++++ . ....+++|||++|.+|.++.... ........+...+.
T Consensus 54 ~~l~~~~h------------------~--~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 113 (267)
T cd08229 54 DLLKQLNH------------------P--NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFV 113 (267)
T ss_pred HHHHHccC------------------C--chhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHH
Confidence 54444422 1 122222 1 45578999999999998875421 12234444444444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 114 ~i~~~l~~LH~~~i~H~dl~p~nili~~~--~~~~l~dfg~~~~~~ 157 (267)
T cd08229 114 QLCSALEHMHSRRVMHRDIKPANVFITAT--GVVKLGDLGLGRFFS 157 (267)
T ss_pred HHHHHHHHHHHCCeecCCCCHHHEEEcCC--CCEEECcchhhhccc
Confidence 443 788999999999999999999864 899999999877654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.20 E-value=1e-10 Score=125.48 Aligned_cols=143 Identities=24% Similarity=0.243 Sum_probs=92.5
Q ss_pred cccccccceeeEEEEec-CCC--EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 11 TPLATASIAQVHRATLV-DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
+.||+|++|.||+|+.. +++ .||||..+......- +. -++..
T Consensus 5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~--~~---------------------------------~~~~~ 49 (272)
T cd05075 5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRS--EM---------------------------------EDFLS 49 (272)
T ss_pred cccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHH--HH---------------------------------HHHHH
Confidence 56999999999999976 343 699998665432110 00 01344
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE-e------cCCceEEEeecCCcCCCChHHHhh-----cCCCHH
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI-Q------SSETVLILEFMDGIRLNDCESLEA-----FGVNKQ 155 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~-~------~~~~vLvmE~i~G~~L~~~~~~~~-----~~~~~~ 155 (864)
|.+.+.++++. .-+.+.... . ....+++|||++|.+|.++..... ..++..
T Consensus 50 E~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~ 112 (272)
T cd05075 50 EAVCMKEFDHP-----------------NVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQ 112 (272)
T ss_pred HHHHHHhCCCC-----------------CcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHH
Confidence 66665555321 011111111 1 124689999999999887653221 123444
Q ss_pred HHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 156 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 156 ~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||+++.+..
T Consensus 113 ~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 164 (272)
T cd05075 113 MLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNEN--MNVCVADFGLSKKIYN 164 (272)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCC--CCEEECCCCcccccCc
Confidence 4444444443 788999999999999999999865 8999999999887643
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.7e-11 Score=129.04 Aligned_cols=138 Identities=16% Similarity=0.107 Sum_probs=91.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.+ +|+.||||+.+...... .. .-.+.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~~------~~~~~~e~ 50 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEE-----------------------------GV------PSTAIREI 50 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEeccccccC-----------------------------Cc------hHHHHHHH
Confidence 57999999999999976 79999999865321100 00 00123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh--cCCCHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~--~~~~~~~l~~~~~~ 163 (864)
..+.++.+ ..+.+++ . ....++||||++| .|.++..... ...+...+...+.+
T Consensus 51 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~q 109 (285)
T cd07861 51 SLLKELQH--------------------PNIVCLQDVLMQESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQ 109 (285)
T ss_pred HHHHhcCC--------------------CCEeeeEEEEeeCCeEEEEEecCCC-CHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 44444422 1233333 2 5667899999986 5554432211 23455555444444
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 110 i~~~L~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~ 152 (285)
T cd07861 110 ILQGILFCHSRRVLHRDLKPQNLLIDNK--GVIKLADFGLARAFG 152 (285)
T ss_pred HHHHHHHHHhCCeeecCCCHHHEEEcCC--CcEEECcccceeecC
Confidence 44 788899999999999999999865 899999999987553
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.20 E-value=9.7e-11 Score=126.29 Aligned_cols=138 Identities=21% Similarity=0.231 Sum_probs=96.0
Q ss_pred cccccccceeeEEEEec-----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV-----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||.|++|.||+|+.. +++.||||+.++..... .+-+|
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~------------------------------------~~~~~ 53 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQ------------------------------------HRSDF 53 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchH------------------------------------HHHHH
Confidence 67999999999999963 47899999877543320 01123
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 159 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~ 159 (864)
.+|.+.+.++.+ + .+++++. ....+++|||++|.+|.++........+...+..
T Consensus 54 ~~ei~~l~~l~~------------------~--~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~ 113 (284)
T cd05038 54 EREIEILRTLDH------------------E--NIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLL 113 (284)
T ss_pred HHHHHHHHhCCC------------------C--ChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHH
Confidence 445544444322 1 1222221 2246899999999999887643333355555555
Q ss_pred HHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 160 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 160 ~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 114 ~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~ 160 (284)
T cd05038 114 FSSQICKGMDYLGSQRYIHRDLAARNILVESE--DLVKISDFGLAKVLP 160 (284)
T ss_pred HHHHHHHHHHHHHhCCeecCCCCHHhEEEcCC--CCEEEcccccccccc
Confidence 444443 778899999999999999999865 899999999998776
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.2e-10 Score=125.06 Aligned_cols=137 Identities=18% Similarity=0.179 Sum_probs=90.7
Q ss_pred cccccccceeeEEEEec-CCC--EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 11 TPLATASIAQVHRATLV-DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
+.||.|++|.||+|+++ +|+ .|++|..+........ -++..
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~------------------------------------~~~~~ 44 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH------------------------------------RDFAG 44 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHH------------------------------------HHHHH
Confidence 36899999999999986 555 4688866533211100 12444
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh--------------
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-------------- 149 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~-------------- 149 (864)
|...+.++.+ ++ .|.+++. ....+++|||++|.+|.++.....
T Consensus 45 E~~~l~~l~~-----------------h~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~ 105 (270)
T cd05047 45 ELEVLCKLGH-----------------HP--NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST 105 (270)
T ss_pred HHHHHHhhcc-----------------CC--CeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCC
Confidence 6655555532 11 1223332 456789999999999987753211
Q ss_pred -cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 150 -FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 150 -~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
..+....+...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||++..
T Consensus 106 ~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~--~~~kl~dfgl~~~ 161 (270)
T cd05047 106 ASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN--YVAKIADFGLSRG 161 (270)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCC--CeEEECCCCCccc
Confidence 1133444444444443 788999999999999999999865 8999999998753
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.19 E-value=6.7e-11 Score=127.82 Aligned_cols=142 Identities=20% Similarity=0.196 Sum_probs=96.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|+.. +|+.||||+.+...... .. +-++.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-----------------------------~~------~~~~~~e~ 50 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEG-----------------------------GI------PNQALREI 50 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccccc-----------------------------hh------hHHHHHHH
Confidence 56999999999999975 79999999865432100 00 01133444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..++++++. .-+.+...+. ....++||||+ |.+|.++........+...+...+.+++ +
T Consensus 51 ~~l~~~~~~-----------------~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l 112 (286)
T cd07832 51 KALQACQHP-----------------YVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGV 112 (286)
T ss_pred HHHHhCCCC-----------------CCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 444444220 0122222222 55678999999 9999887543334455555555444443 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 113 ~~lH~~~i~H~dl~p~ni~~~~~--~~~~l~dfg~~~~~~~ 151 (286)
T cd07832 113 AYMHANGIMHRDLKPANLLISAD--GVLKIADFGLARLFSE 151 (286)
T ss_pred HHHHHCCeecCCcCHHHEEEcCC--CcEEEeeeeecccccC
Confidence 78899999999999999999865 8999999999887654
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.2e-10 Score=126.06 Aligned_cols=80 Identities=14% Similarity=0.109 Sum_probs=62.4
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+++|||++|.+|.++........+...+...+.++. +..+|..|++|+|+||.||+++.+ ++++|+|||+++
T Consensus 80 ~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~--~~~kl~Dfg~~~ 157 (279)
T cd05111 80 GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSD--SIVQIADFGVAD 157 (279)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCC--CcEEEcCCccce
Confidence 4556799999999999988654333455555555544444 778999999999999999999865 899999999988
Q ss_pred ccCh
Q 002927 204 KLSS 207 (864)
Q Consensus 204 ~l~~ 207 (864)
.+.+
T Consensus 158 ~~~~ 161 (279)
T cd05111 158 LLYP 161 (279)
T ss_pred eccC
Confidence 6644
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.1e-11 Score=130.43 Aligned_cols=138 Identities=15% Similarity=0.126 Sum_probs=91.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|+.. +|+.||+|+.+...... ..+.++.+|.
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~-----------------------------------~~~~~~~~ei 50 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-----------------------------------GVPSSALREI 50 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeecccccc-----------------------------------cCccchhHHH
Confidence 56999999999999976 79999999865321100 0011233344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++++ + .+.+++ . ....+++|||++| ++.+.........+...+...+.+++
T Consensus 51 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~ 109 (284)
T cd07839 51 CLLKELKH------------------K--NIVRLYDVLHSDKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLL 109 (284)
T ss_pred HHHHhcCC------------------C--CeeeHHHHhccCCceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 44444322 1 122222 1 4567899999986 45444322223355555555555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||+||+++.+ ++++|+|||++..+.
T Consensus 110 ~al~~LH~~~i~H~dl~~~nil~~~~--~~~~l~dfg~~~~~~ 150 (284)
T cd07839 110 KGLAFCHSHNVLHRDLKPQNLLINKN--GELKLADFGLARAFG 150 (284)
T ss_pred HHHHHHHHCCEecCCCCHHHEEEcCC--CcEEECccchhhccC
Confidence 788999999999999999999865 899999999987553
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.1e-10 Score=124.24 Aligned_cols=141 Identities=16% Similarity=0.167 Sum_probs=97.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++|+.|++|.||+|+.. +++.|+||+........ .+ .+.+|.
T Consensus 9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~~---------------------------------~~~~e~ 51 (262)
T cd06613 9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDD----FE---------------------------------IIQQEI 51 (262)
T ss_pred EEecCCCceEEEEeEecCCCCEEEEEEEEcCchhh----HH---------------------------------HHHHHH
Confidence 67999999999999975 78999999876432211 00 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+...+. ....+++|||++|.+|.++........+...+...+.+++ +
T Consensus 52 ~~l~~~~h~-----------------~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l 114 (262)
T cd06613 52 SMLKECRHP-----------------NIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGL 114 (262)
T ss_pred HHHHhCCCC-----------------ChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence 444443221 0112222222 4567899999999999987654434566666555555544 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 115 ~~lh~~~i~h~dl~p~ni~i~~~--~~~~l~d~g~~~~~~~ 153 (262)
T cd06613 115 AYLHETGKIHRDIKGANILLTED--GDVKLADFGVSAQLTA 153 (262)
T ss_pred HHHHhCCceecCCChhhEEECCC--CCEEECccccchhhhh
Confidence 78899999999999999999965 8999999999876543
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.19 E-value=6.8e-11 Score=128.47 Aligned_cols=139 Identities=20% Similarity=0.211 Sum_probs=88.8
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+.|++|++|.||+|+.+ +|+.||||+.+....+. .+..+.+|
T Consensus 10 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~------------------------------------~~~~~~~e 53 (291)
T cd07870 10 LEKLGEGSYATVYKGISRINGQLVALKVISMKTEEG------------------------------------VPFTAIRE 53 (291)
T ss_pred EEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC------------------------------------CcHHHHHH
Confidence 367999999999999975 79999999865322110 01123345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
+..+.++.+ +++ .+..... ....++||||++| ++.+.............+...+.+++
T Consensus 54 ~~~l~~l~h------------------~ni~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~ 114 (291)
T cd07870 54 ASLLKGLKH------------------ANIVLLHDIIHTKETLTFVFEYMHT-DLAQYMIQHPGGLHPYNVRLFMFQLLR 114 (291)
T ss_pred HHHHHhcCC------------------CCEeEEEEEEecCCeEEEEEecccC-CHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 555554422 122 2222222 4567899999975 44333221222233444444333433
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..|++|+|+||+||+++.+ ++++|+|||++...
T Consensus 115 ~L~~lH~~~i~H~dlkp~Nil~~~~--~~~~l~Dfg~~~~~ 153 (291)
T cd07870 115 GLAYIHGQHILHRDLKPQNLLISYL--GELKLADFGLARAK 153 (291)
T ss_pred HHHHHHhCCcccCCCChHHEEEcCC--CcEEEecccccccc
Confidence 778899999999999999999865 89999999988654
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.3e-10 Score=123.36 Aligned_cols=140 Identities=16% Similarity=0.217 Sum_probs=97.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|+||+|+.+ +++.|++|..+.... . -++.+|.
T Consensus 9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~---------------------------------~~~~~e~ 49 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED------L---------------------------------QEIIKEI 49 (256)
T ss_pred hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH------H---------------------------------HHHHHHH
Confidence 56999999999999987 589999998653211 0 0133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.+ ..-+.+...+. ....+++|||++|.+|.++........+...+...+.+++ +
T Consensus 50 ~~~~~l~~-----------------~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l 112 (256)
T cd06612 50 SILKQCDS-----------------PYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGL 112 (256)
T ss_pred HHHHhCCC-----------------CcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHH
Confidence 55444421 00122222222 4567899999999999988654444455555555555443 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
..+|..|++|+|++|+||+++.+ +.++|+|||++..+...
T Consensus 113 ~~lh~~~i~H~dl~~~ni~~~~~--~~~~l~dfg~~~~~~~~ 152 (256)
T cd06612 113 EYLHSNKKIHRDIKAGNILLNEE--GQAKLADFGVSGQLTDT 152 (256)
T ss_pred HHHHHCCcccCCCCcceEEECCC--CcEEEcccccchhcccC
Confidence 78899999999999999999865 89999999998877643
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.9e-11 Score=125.77 Aligned_cols=80 Identities=13% Similarity=0.078 Sum_probs=58.4
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCC-----CceEEEe
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP-----HRPILLD 198 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~-----g~i~LiD 198 (864)
....+|+|||++|.+|..+........+...+...+.+++ +..+|+.|++|+|+||.|||++.++. ..++++|
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d 155 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSD 155 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCC
Confidence 4568999999999998776443223345555544444443 78899999999999999999975421 1388999
Q ss_pred ccccccc
Q 002927 199 FGLTKKL 205 (864)
Q Consensus 199 FG~~~~l 205 (864)
||++..+
T Consensus 156 ~g~~~~~ 162 (262)
T cd05077 156 PGIPITV 162 (262)
T ss_pred CCCCccc
Confidence 9987654
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.2e-10 Score=124.73 Aligned_cols=76 Identities=21% Similarity=0.262 Sum_probs=58.0
Q ss_pred ceEEEeecCCcCCCChHHHhh-----cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccc
Q 002927 129 TVLILEFMDGIRLNDCESLEA-----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGL 201 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~~~-----~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~ 201 (864)
.+++|||++|.+|........ ...+...+...+.+++ +..+|..|++|+|+||.||+++++ ++++|+|||+
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~dfg~ 159 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRED--MTVCVADFGL 159 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCC--CeEEECCccc
Confidence 589999999999987653322 1234444444444443 788999999999999999999865 8999999999
Q ss_pred ccccC
Q 002927 202 TKKLS 206 (864)
Q Consensus 202 ~~~l~ 206 (864)
++.+.
T Consensus 160 ~~~~~ 164 (273)
T cd05035 160 SKKIY 164 (273)
T ss_pred eeecc
Confidence 87654
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.19 E-value=9.3e-11 Score=128.45 Aligned_cols=141 Identities=18% Similarity=0.181 Sum_probs=92.8
Q ss_pred cccccccceeeEEEEec-CCC----EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV-DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~----~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||+|++|+||+|+.. +|+ .||+|+..+....... ..+
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~ 56 (303)
T cd05110 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN------------------------------------VEF 56 (303)
T ss_pred cccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHH------------------------------------HHH
Confidence 67999999999999965 565 5788876543321100 013
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
.+|...+.++.+ ++ +.+..........++|||+++++|.+.............+...+.++
T Consensus 57 ~~e~~~~~~l~h------------------~niv~~~~~~~~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi 118 (303)
T cd05110 57 MDEALIMASMDH------------------PHLVRLLGVCLSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQI 118 (303)
T ss_pred HHHHHHHHhCCC------------------CCcccEEEEEcCCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHH
Confidence 445554444322 11 12222222445679999999999887754322234444444444443
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 119 ~~~L~~LH~~~ivH~dikp~Nill~~~--~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 119 AKGMMYLEERRLVHRDLAARNVLVKSP--NHVKITDFGLARLLEG 161 (303)
T ss_pred HHHHHHHhhcCeeccccccceeeecCC--CceEEccccccccccC
Confidence 3 778999999999999999999865 7899999999987653
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.8e-11 Score=126.78 Aligned_cols=141 Identities=14% Similarity=0.164 Sum_probs=90.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+....... +.++..|.
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~e~ 50 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE------------------------------------QKRLLMDL 50 (283)
T ss_pred EEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH------------------------------------HHHHHHHH
Confidence 56999999999999986 799999998765432111 01112222
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHH---hhcCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~---~~~~~~~~~l~~~~~~~ 164 (864)
....+.. +++. +.+...+. ....+++|||++| +|.++... .....+...+...+.++
T Consensus 51 ~~~~~~~-----------------~~~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi 112 (283)
T cd06617 51 DISMRSV-----------------DCPYTVTFYGALFREGDVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSI 112 (283)
T ss_pred HHHHHHc-----------------CCCCeeeeeEEEecCCcEEEEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHH
Confidence 2212211 1121 22222222 5678899999986 44444321 11234455555555554
Q ss_pred H--HHHHHhc-CeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVD-GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~-G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+|.. |++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 113 ~~~l~~lH~~~~i~h~dlkp~nil~~~~--~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 113 VKALEYLHSKLSVIHRDVKPSNVLINRN--GQVKLCDFGISGYLVD 156 (283)
T ss_pred HHHHHHHhhcCCeecCCCCHHHEEECCC--CCEEEeeccccccccc
Confidence 4 7888987 99999999999999865 8999999999876643
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.1e-10 Score=127.99 Aligned_cols=142 Identities=18% Similarity=0.132 Sum_probs=91.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-|++|++|.||+|+.. +|+.||||+......... + ..-++.+|.
T Consensus 21 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~----------------------------~------~~~~~~~Ei 66 (307)
T cd06607 21 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSN----------------------------E------KWQDIIKEV 66 (307)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcH----------------------------H------HHHHHHHHH
Confidence 56999999999999976 799999997642211000 0 001133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+.++.+ +. +.+..++. ....+|||||++|. +.+.............+...+.+++
T Consensus 67 ~~l~~l~h------------------~niv~~~~~~~~~~~~~lv~e~~~g~-l~~~~~~~~~~l~~~~~~~~~~ql~~~ 127 (307)
T cd06607 67 RFLQQLRH------------------PNTIEYKGCYLREHTAWLVMEYCLGS-ASDILEVHKKPLQEVEIAAICHGALQG 127 (307)
T ss_pred HHHHhCCC------------------CCEEEEEEEEEeCCeEEEEHHhhCCC-HHHHHHHcccCCCHHHHHHHHHHHHHH
Confidence 44444422 12 22333333 56678999999873 3333322223345555444443433
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++...+.
T Consensus 128 L~~LH~~~i~H~dl~p~nIl~~~~--~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 128 LAYLHSHERIHRDIKAGNILLTEP--GTVKLADFGSASLVSP 167 (307)
T ss_pred HHHHHHCCceecCCCcccEEECCC--CCEEEeecCcceecCC
Confidence 778899999999999999999865 8999999999876543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.3e-10 Score=125.57 Aligned_cols=137 Identities=16% Similarity=0.195 Sum_probs=90.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.. +++.||+|+........ . ++..|.
T Consensus 22 ~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~--~------------------------------------~~~~e~ 63 (282)
T cd06636 22 EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEE--E------------------------------------EIKLEI 63 (282)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHH--H------------------------------------HHHHHH
Confidence 67999999999999975 79999999864321110 0 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----------cCCceEEEeecCCcCCCChHHHhhc-CCCHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----------SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVV 158 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----------~~~~vLvmE~i~G~~L~~~~~~~~~-~~~~~~l~ 158 (864)
..+.++.. ++. +.+++. ....+++|||++|.+|.++...... ......+.
T Consensus 64 ~~l~~~~~-----------------h~~--i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~ 124 (282)
T cd06636 64 NMLKKYSH-----------------HRN--IATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIA 124 (282)
T ss_pred HHHHHhcC-----------------CCc--EEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHH
Confidence 33444321 111 222221 1345799999999999887653222 23444343
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 125 ~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~--~~~~l~dfg~~~~~~ 172 (282)
T cd06636 125 YICREILRGLAHLHAHKVIHRDIKGQNVLLTEN--AEVKLVDFGVSAQLD 172 (282)
T ss_pred HHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC--CCEEEeeCcchhhhh
Confidence 3333333 778899999999999999999865 889999999987654
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.3e-10 Score=123.88 Aligned_cols=141 Identities=18% Similarity=0.188 Sum_probs=98.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|+.. +|+.|+||+.++...... .-++.+|.
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~------------------------------------~~~~~~e~ 50 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEF------------------------------------RKQLLREL 50 (264)
T ss_pred eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHH------------------------------------HHHHHHHH
Confidence 78999999999999987 699999998765432100 01134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++++. .-+.+...+. ....+++|||++|.+|.++.... .......+...+.+++ +
T Consensus 51 ~~l~~l~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l 112 (264)
T cd06623 51 KTLRSCESP-----------------YVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGL 112 (264)
T ss_pred HHHHhcCCC-----------------CeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHH
Confidence 555554321 0122222222 56678999999999999875432 3455555555544444 7
Q ss_pred HHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|. .|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 113 ~~lh~~~~~~H~~l~~~ni~~~~~--~~~~l~df~~~~~~~~ 152 (264)
T cd06623 113 DYLHTKRHIIHRDIKPSNLLINSK--GEVKIADFGISKVLEN 152 (264)
T ss_pred HHHhccCCCccCCCCHHHEEECCC--CCEEEccCccceeccc
Confidence 78999 999999999999999865 8999999999887654
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.2e-10 Score=126.59 Aligned_cols=140 Identities=17% Similarity=0.189 Sum_probs=95.6
Q ss_pred ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 10 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
...|+.|+++.||+|+. +|+.||||+.+...... ..+++ .|.+|+
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~------------------------~~~~~----------~~~~E~ 69 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGH------------------------KVLID----------ITENEI 69 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEecccccccc------------------------HHHHH----------HHHHHH
Confidence 46799999999999997 79999999876432110 00000 145577
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 161 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~ 161 (864)
+.+.++++ + .|.+++. ....+|+|||++|++|.++.... ...+.....+.+
T Consensus 70 ~~l~~l~h------------------~--nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~ 128 (283)
T PHA02988 70 KNLRRIDS------------------N--NILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMA 128 (283)
T ss_pred HHHHhcCC------------------C--CEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHH
Confidence 77666643 1 2333332 23468999999999999886432 234444444444
Q ss_pred HHHH--HHHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 162 TRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 162 ~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.++. +..+|. .|++|||++|.||+++.+ +.++|+|||++..++.
T Consensus 129 ~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~--~~~kl~dfg~~~~~~~ 175 (283)
T PHA02988 129 IDCCKGLYNLYKYTNKPYKNLTSVSFLVTEN--YKLKIICHGLEKILSS 175 (283)
T ss_pred HHHHHHHHHHHhcCCCCCCcCChhhEEECCC--CcEEEcccchHhhhcc
Confidence 4433 678887 599999999999999865 8999999999876543
|
|
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.6e-11 Score=128.97 Aligned_cols=145 Identities=20% Similarity=0.222 Sum_probs=94.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|+||+|..+ +|+.||||..+........ .+. +-.+..|+
T Consensus 6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~--------------------------~~~------~~~~~~e~ 53 (298)
T cd07841 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAK--------------------------DGI------NFTALREI 53 (298)
T ss_pred eeeeeccccEEEEEEECCCCcEEEEEEEecccccccc--------------------------chh------hHHHHHHH
Confidence 46999999999999976 7999999987654321000 000 01123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++++. .-+.+...+. ....++||||+ +.+|.++.......++...+...+.+++ +
T Consensus 54 ~~l~~~~h~-----------------~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al 115 (298)
T cd07841 54 KLLQELKHP-----------------NIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGL 115 (298)
T ss_pred HHHhhcCCC-----------------CChhhhheeecCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence 444444321 0111122222 34568999999 7788776532221355555555555444 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|++|+||+++.+ +.++|+|||++..+..
T Consensus 116 ~~lH~~~i~H~dl~p~nill~~~--~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 116 EYLHSNWILHRDLKPNNLLIASD--GVLKLADFGLARSFGS 154 (298)
T ss_pred HHHHhCCeeecCCChhhEEEcCC--CCEEEccceeeeeccC
Confidence 78899999999999999999865 8999999999877643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.4e-10 Score=123.88 Aligned_cols=141 Identities=18% Similarity=0.138 Sum_probs=94.9
Q ss_pred cccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHHH
Q 002927 13 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 91 (864)
Q Consensus 13 lasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n 91 (864)
||.|++|.||+|+.. +|+.||||+..+.....- + .+-.+.+|.+.
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~----------------------------~------~~~~~~~e~~~ 46 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVET----------------------------G------QQEHIFSEKEI 46 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhh----------------------------h------HHHHHHHHHHH
Confidence 689999999999976 699999998753221100 0 01124455555
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HH
Q 002927 92 TRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~ 167 (864)
+.++.+ +. +.+..... ....+++|||++|.+|.++.... .......+...+.+++ +.
T Consensus 47 l~~l~h------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~ 107 (262)
T cd05572 47 LEECNH------------------PFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDR-GLFDEYTARFYIACVVLAFE 107 (262)
T ss_pred HHhCCC------------------CCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHH
Confidence 544422 11 11222222 56688999999999998875422 2344444444443433 78
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
.+|..|++|+|++|.||+++.+ +.++|+|||++..+...
T Consensus 108 ~lH~~~~~h~dl~~~nilv~~~--~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 108 YLHNRGIIYRDLKPENLLLDSN--GYVKLVDFGFAKKLKSG 146 (262)
T ss_pred HHhhCCcccCCCCHHHEEEcCC--CCEEEeeCCcccccCcc
Confidence 9999999999999999999865 89999999999887654
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.18 E-value=7.1e-11 Score=128.10 Aligned_cols=142 Identities=20% Similarity=0.218 Sum_probs=92.0
Q ss_pred cccccccceeeEEEEec----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.|+.|++|+||+|+.. +++.||||+.+...... ... ..-.+.
T Consensus 6 ~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~---~~~------------------------------~~~~~~ 52 (288)
T cd05583 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQ---KAK------------------------------TAEHTR 52 (288)
T ss_pred EEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHh---hhh------------------------------HHHHHH
Confidence 67999999999999852 67899999876321100 000 001133
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeE---Ee-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV---IQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v---~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
+|...+.++++ + -.++++ +. ....+|||||++|.+|.+.... ...+....+...+.
T Consensus 53 ~E~~~l~~~~~-----------------~--~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~ 112 (288)
T cd05583 53 TERQVLEAVRR-----------------C--PFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQ-REHFTESEVRVYIA 112 (288)
T ss_pred HHHHHHHhccC-----------------C--cchhhhheeeecCCEEEEEEecCCCCcHHHHHhh-cCCcCHHHHHHHHH
Confidence 45555555432 1 111222 12 3456799999999988776432 22344454444443
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 113 ql~~~l~~lH~~~~~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~~ 157 (288)
T cd05583 113 EIVLALDHLHQLGIIYRDIKLENILLDSE--GHVVLTDFGLSKEFLA 157 (288)
T ss_pred HHHHHHHHHHHCCeeccCCCHHHeEECCC--CCEEEEECcccccccc
Confidence 433 778899999999999999999865 8999999999876543
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.3e-11 Score=137.83 Aligned_cols=142 Identities=15% Similarity=0.187 Sum_probs=100.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|-+|+||+++.+ +|+.+||||+.|.....-+.++ |.
T Consensus 25 evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~--------------------------------------ey 66 (953)
T KOG0587|consen 25 EVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIEL--------------------------------------EY 66 (953)
T ss_pred EEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHH--------------------------------------HH
Confidence 56999999999999954 8999999999987654322111 11
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---------cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVE 159 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---------~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~ 159 (864)
|+.++.. +++ .++..|. ..+.+||||||.|+++.|+.+-.. ...+...++-
T Consensus 67 -nil~~~~----------------~hp--nv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaY 127 (953)
T KOG0587|consen 67 -NMLKKYS----------------HHP--NVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAY 127 (953)
T ss_pred -HHHHhcc----------------CCC--CcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHH
Confidence 2222221 122 2333331 356789999999999999976433 1233444555
Q ss_pred HHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHH
Q 002927 160 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 211 (864)
Q Consensus 160 ~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 211 (864)
++..++ +.++|...++|||+|-.|||++.+ |+++|+|||...+++....+
T Consensus 128 I~re~lrgl~HLH~nkviHRDikG~NiLLT~e--~~VKLvDFGvSaQldsT~gr 179 (953)
T KOG0587|consen 128 ILREILRGLAHLHNNKVIHRDIKGQNVLLTEN--AEVKLVDFGVSAQLDSTVGR 179 (953)
T ss_pred HHHHHHHHHHHHhhcceeeecccCceEEEecc--CcEEEeeeeeeeeeeccccc
Confidence 555554 777899999999999999999976 99999999999999876543
|
|
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.5e-11 Score=130.33 Aligned_cols=77 Identities=22% Similarity=0.368 Sum_probs=60.1
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+++|||++|.+|.++.. ....+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 91 ~~~~~lv~e~~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~--~~~kL~dfg~~~ 166 (292)
T cd06658 91 GDELWVVMEFLEGGALTDIVT--HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSD--GRIKLSDFGFCA 166 (292)
T ss_pred CCeEEEEEeCCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC--CCEEEccCcchh
Confidence 355689999999999987643 33355555555555544 788999999999999999999865 899999999876
Q ss_pred ccC
Q 002927 204 KLS 206 (864)
Q Consensus 204 ~l~ 206 (864)
.+.
T Consensus 167 ~~~ 169 (292)
T cd06658 167 QVS 169 (292)
T ss_pred hcc
Confidence 543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.18 E-value=6e-11 Score=130.22 Aligned_cols=142 Identities=15% Similarity=0.104 Sum_probs=93.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||+|+.+...... ..+..+.+|+
T Consensus 13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~~~E~ 57 (309)
T cd07845 13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-----------------------------------GIPISSLREI 57 (309)
T ss_pred eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-----------------------------------CCcchhhHHH
Confidence 56999999999999976 79999999865322100 0011233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
+.+.++++. .-+.+..++. ....++||||++| +|.++.......+....+...+.+++
T Consensus 58 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~ 119 (309)
T cd07845 58 TLLLNLRHP-----------------NIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLR 119 (309)
T ss_pred HHHHhCCCC-----------------CCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 555554321 1223333332 1346899999986 55555432223344555544444444
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|+||+++.+ +.++|+|||++..+..
T Consensus 120 ~l~~lH~~~i~H~dl~p~nil~~~~--~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 120 GLQYLHENFIIHRDLKVSNLLLTDK--GCLKIADFGLARTYGL 160 (309)
T ss_pred HHHHHHhCCeecCCCCHHHEEECCC--CCEEECccceeeecCC
Confidence 778999999999999999999865 8999999999887643
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.18 E-value=1e-10 Score=125.47 Aligned_cols=140 Identities=15% Similarity=0.170 Sum_probs=91.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|+||+|+.. +++.||||+....-.. +.++..|.
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~--------------------------------------~~~~~~e~ 53 (272)
T cd06637 12 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE--------------------------------------EEEIKQEI 53 (272)
T ss_pred HheeecCCeEEEEEEEcCCCcEEEEEEEEcCCcc--------------------------------------HHHHHHHH
Confidence 56999999999999976 7899999986432110 01122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-------cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEE 160 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-------~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~ 160 (864)
..+.++.+ ++. +.+...+. ....+++|||+.|.+|.++..... .......+...
T Consensus 54 ~~l~~~~~-----------------h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~ 116 (272)
T cd06637 54 NMLKKYSH-----------------HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYI 116 (272)
T ss_pred HHHHHhcC-----------------CCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHH
Confidence 44443321 111 12222221 123579999999999988754322 22344444444
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 117 ~~qi~~~l~~LH~~~ivh~dl~~~nili~~~--~~~~l~Dfg~~~~~~~ 163 (272)
T cd06637 117 CREILRGLSHLHQHKVIHRDIKGQNVLLTEN--AEVKLVDFGVSAQLDR 163 (272)
T ss_pred HHHHHHHHHHHHHCCCccCCCCHHHEEECCC--CCEEEccCCCceeccc
Confidence 33333 778999999999999999999865 8899999999876643
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.17 E-value=9.6e-12 Score=119.52 Aligned_cols=143 Identities=17% Similarity=0.204 Sum_probs=90.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|.+|.|++|+.+ +++.||+|-.|-+-.+ +....+..+|+-+.+|.
T Consensus 8 ekigegtygtvfkarn~~t~eivalkrvrldddd-----------------------------egvpssalreicllkel 58 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDDD-----------------------------EGVPSSALREICLLKEL 58 (292)
T ss_pred HhhcCCcceeeEecccCCccceEEEEEEeccCCC-----------------------------CCCcHHHHHHHHHHHHh
Confidence 56999999999999976 7999999976532111 01112233455555565
Q ss_pred H--HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 90 E--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 90 ~--n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
+ |+.|+. .+.. ..+..||.|||+- .|..+........|.+.+-.-+.+.+
T Consensus 59 khknivrl~-------------------------dvlhsdkkltlvfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllr 112 (292)
T KOG0662|consen 59 KHKNIVRLH-------------------------DVLHSDKKLTLVFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLR 112 (292)
T ss_pred hhcceeehh-------------------------hhhccCceeEEeHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHh
Confidence 4 233332 2223 3455699999972 22222111222344443333333333
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHH
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 210 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 210 (864)
+...|.+++.|||+||.|++++.+ |+++|.|||+++.+.-..|
T Consensus 113 gl~fchshnvlhrdlkpqnllin~n--gelkladfglarafgipvr 156 (292)
T KOG0662|consen 113 GLGFCHSHNVLHRDLKPQNLLINRN--GELKLADFGLARAFGIPVR 156 (292)
T ss_pred hhhhhhhhhhhhccCCcceEEeccC--CcEEecccchhhhcCCceE
Confidence 445689999999999999999975 9999999999987665443
|
|
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.4e-10 Score=124.27 Aligned_cols=138 Identities=17% Similarity=0.176 Sum_probs=94.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++|++|++|.||+|+.+ +++.|++|+........ -++.+|.
T Consensus 12 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--------------------------------------~~~~~e~ 53 (275)
T cd06608 12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEE--------------------------------------EEIKEEY 53 (275)
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEEecCchhH--------------------------------------HHHHHHH
Confidence 78999999999999986 78999999876543210 0133444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---c-------CCceEEEeecCCcCCCChHHHhh---cCCCHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---S-------SETVLILEFMDGIRLNDCESLEA---FGVNKQK 156 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~-------~~~vLvmE~i~G~~L~~~~~~~~---~~~~~~~ 156 (864)
..+.++.. + -.+++++. . ...+++|||++|.+|.++..... ...+...
T Consensus 54 ~~l~~~~~-----------------h--~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~ 114 (275)
T cd06608 54 NILRKYSN-----------------H--PNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEW 114 (275)
T ss_pred HHHHHhcC-----------------C--CChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHH
Confidence 44444421 1 11222221 1 12589999999999988754322 2344444
Q ss_pred HHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 157 VVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 157 l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 115 ~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~--~~~~l~d~~~~~~~~~ 165 (275)
T cd06608 115 IAYILRETLRGLAYLHENKVIHRDIKGQNILLTKN--AEVKLVDFGVSAQLDS 165 (275)
T ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccC--CeEEECCCccceeccc
Confidence 444444333 678899999999999999999865 8999999999876654
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.17 E-value=9.3e-11 Score=124.46 Aligned_cols=146 Identities=16% Similarity=0.082 Sum_probs=93.5
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+.||+|++|+||+|+.+ +|+.|+||+.......... .+..+. +.+|
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~--------------------------~~~~~~------~~~e 52 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTG--------------------------QEAVKQ------LEQE 52 (258)
T ss_pred cceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccc--------------------------hHHHHH------HHHH
Confidence 478999999999999987 8999999987542211000 000011 2234
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..-+.++.+. .-+.+..... ....+++|||++|.+|.++.... ...+...+...+.+++
T Consensus 53 ~~~l~~~~h~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~ 114 (258)
T cd06632 53 IALLSKLQHP-----------------NIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKY-GSFPEPVIRLYTRQILLG 114 (258)
T ss_pred HHHHHhcCCC-----------------CchheeeeEecCCeEEEEEEecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHH
Confidence 4333333210 0111111212 45678999999999998775322 2244444433333333
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|+||+++.+ +.++|+|||++..+..
T Consensus 115 l~~lH~~~i~H~dl~~~ni~~~~~--~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 115 LEYLHDRNTVHRDIKGANILVDTN--GVVKLADFGMAKQVVE 154 (258)
T ss_pred HHHHHHCCcccCCCCHHHEEECCC--CCEEEccCccceeccc
Confidence 678899999999999999999865 8999999999877644
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.2e-11 Score=126.80 Aligned_cols=141 Identities=12% Similarity=0.133 Sum_probs=95.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++|+.|++|.||+|+.. +|+.||+|+........ .+ ..-++..|.
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~~------------------------------~~~~~~~e~ 51 (258)
T cd05578 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVE----KG------------------------------SVRNVLNER 51 (258)
T ss_pred EEeccCCCceEEEEEEccCCcEEEEEEEehhhhcc----hh------------------------------HHHHHHHHH
Confidence 68999999999999976 79999999875321100 00 000123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.++++.+ + .+++++. ....+++|||++|.+|.+..... ...+...+...+.+++
T Consensus 52 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~ 110 (258)
T cd05578 52 RILQELNH------------------P--FLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIV 110 (258)
T ss_pred HHHHhCCC------------------C--ChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHH
Confidence 43333321 1 1222221 34578999999999998775432 3556666666555554
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+..+...
T Consensus 111 ~~l~~lh~~~i~h~dl~~~nil~~~~--~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 111 LALEYLHSKGIIHRDIKPDNILLDEQ--GHVHITDFNIATKVTPD 153 (258)
T ss_pred HHHHHHHhCCeeccCCCHHHeEEcCC--CCEEEeecccccccCCC
Confidence 778899999999999999999865 89999999988766543
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-10 Score=127.96 Aligned_cols=141 Identities=14% Similarity=0.198 Sum_probs=87.7
Q ss_pred cccccccccceeeEEEEec---CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 9 VETPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 9 d~~plasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+...||.|++|.||+|+.+ +++.||||..+..... ..+
T Consensus 5 ~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~---------------------------------------~~~ 45 (317)
T cd07867 5 EGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGIS---------------------------------------MSA 45 (317)
T ss_pred eceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCc---------------------------------------HHH
Confidence 3467999999999999975 4578999976532100 012
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe---cCCceEEEeecCCcCCCChHHHhh--------cCCC
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ---SSETVLILEFMDGIRLNDCESLEA--------FGVN 153 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~--------~~~~ 153 (864)
.+|++.+.++.+ +. +.+..++. ....+++|||++| .+.++..... ..+.
T Consensus 46 ~~E~~~l~~l~h------------------~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~ 106 (317)
T cd07867 46 CREIALLRELKH------------------PNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLP 106 (317)
T ss_pred HHHHHHHHhCCC------------------CCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCC
Confidence 335554444432 12 22333332 2346799999986 4443322111 1233
Q ss_pred HHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccC--CCCceEEEecccccccCh
Q 002927 154 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 154 ~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~~ 207 (864)
...+...+.+++ +..+|..|++|+|+||.||++..+ .+++++|+|||+++.+..
T Consensus 107 ~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~ 164 (317)
T cd07867 107 RSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 164 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCC
Confidence 333333333333 778899999999999999999532 247899999999986643
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.1e-11 Score=132.68 Aligned_cols=139 Identities=20% Similarity=0.238 Sum_probs=98.3
Q ss_pred ccccccc-cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhh
Q 002927 4 MFMDFVE-TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 82 (864)
Q Consensus 4 ~F~~fd~-~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 82 (864)
-|++|.+ +=||+|+-|.|++|+++ ++.||||- +.+.-+.|+
T Consensus 122 PFe~IsELeWlGSGaQGAVF~Grl~-netVAVKK----V~elkETdI--------------------------------- 163 (904)
T KOG4721|consen 122 PFEEISELEWLGSGAQGAVFLGRLH-NETVAVKK----VRELKETDI--------------------------------- 163 (904)
T ss_pred CHHHhhhhhhhccCcccceeeeecc-CceehhHH----HhhhhhhhH---------------------------------
Confidence 3667754 78999999999999985 78999993 223333333
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEE-eeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHH
Q 002927 83 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLI-PEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 160 (864)
Q Consensus 83 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~v-P~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 160 (864)
+++++++| +++.- --|-. +-..+|+||||.-+.|..+++.. ..+.+..++..
T Consensus 164 -------KHLRkLkH------------------~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~-~~itp~llv~W 217 (904)
T KOG4721|consen 164 -------KHLRKLKH------------------PNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAG-RPITPSLLVDW 217 (904)
T ss_pred -------HHHHhccC------------------cceeeEeeeecCCceeEEeeeccccccHHHHHhcc-CccCHHHHHHH
Confidence 34444432 12211 11100 23468999999999998886533 34566667666
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
...+. +.++|.+.|||||||.-||||..+ ..|+|.|||-.+.+++.
T Consensus 218 sk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~--d~VKIsDFGTS~e~~~~ 265 (904)
T KOG4721|consen 218 SKGIAGGMNYLHLHKIIHRDLKSPNILISYD--DVVKISDFGTSKELSDK 265 (904)
T ss_pred HHHhhhhhHHHHHhhHhhhccCCCceEeecc--ceEEeccccchHhhhhh
Confidence 55544 888999999999999999999965 68999999998887654
|
|
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.6e-10 Score=131.78 Aligned_cols=38 Identities=18% Similarity=0.309 Sum_probs=34.3
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||+++.+
T Consensus 252 L~~LH~~~ivHrdlkp~NiLl~~~--~~~kL~DfGla~~~ 289 (401)
T cd05107 252 MEFLASKNCVHRDLAARNVLICEG--KLVKICDFGLARDI 289 (401)
T ss_pred HHHHhcCCcCcccCCcceEEEeCC--CEEEEEecCcceec
Confidence 678899999999999999999864 78999999998765
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=7.3e-11 Score=134.38 Aligned_cols=134 Identities=16% Similarity=0.189 Sum_probs=88.8
Q ss_pred cccccccceeeEEEEec---CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 11 TPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 11 ~plasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
+.||.|++|.||+|+.+ +++.||||+...+.. +.+
T Consensus 98 ~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~~------------------------------------------~~~ 135 (392)
T PHA03207 98 SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKT------------------------------------------PGR 135 (392)
T ss_pred EeecCCCCeEEEEEEEcCCccceeEEEEecccccc------------------------------------------HHH
Confidence 67999999999999854 468899997643211 123
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
|.+.+.++.+. .-+.+-..+. ....+++||++.| .|.++.. ....+....+...+.+++
T Consensus 136 E~~il~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~-~~~~l~~~~~~~i~~ql~~ 196 (392)
T PHA03207 136 EIDILKTISHR-----------------AIINLIHAYRWKSTVCMVMPKYKC-DLFTYVD-RSGPLPLEQAITIQRRLLE 196 (392)
T ss_pred HHHHHHhcCCC-----------------CccceeeeEeeCCEEEEEehhcCC-CHHHHHH-hcCCCCHHHHHHHHHHHHH
Confidence 44444444321 0111222222 4567899999975 4444331 223345555555555544
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||.|||++.+ +.++|+|||++..+..
T Consensus 197 aL~~LH~~givHrDlkp~Nill~~~--~~~~l~DfG~a~~~~~ 237 (392)
T PHA03207 197 ALAYLHGRGIIHRDVKTENIFLDEP--ENAVLGDFGAACKLDA 237 (392)
T ss_pred HHHHHHHCCccccCCCHHHEEEcCC--CCEEEccCccccccCc
Confidence 788999999999999999999865 8999999999876643
|
|
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.7e-10 Score=123.17 Aligned_cols=140 Identities=16% Similarity=0.230 Sum_probs=96.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++||.|++|+||+|... +|+.|+||+........ +.. ++.+|+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~~~---------------------------------~~~~e~ 50 (267)
T cd06610 7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT---SVD---------------------------------ELRKEV 50 (267)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch---HHH---------------------------------HHHHHH
Confidence 67999999999999965 78999999875322111 000 133444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh--cCCCHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~--~~~~~~~l~~~~~~ 163 (864)
..+.++.+ + .+++++ . ....+++|||++|.+|.+...... ...+...+...+.+
T Consensus 51 ~~l~~l~~------------------~--~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~q 110 (267)
T cd06610 51 QAMSQCNH------------------P--NVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKE 110 (267)
T ss_pred HHHHhcCC------------------C--CEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHH
Confidence 44444321 1 223333 2 566889999999999988764321 23455555554444
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
++ +..+|..|++|+|++|.||+++++ +.++|+|||++..+...
T Consensus 111 l~~al~~lh~~~i~h~~l~p~ni~~~~~--~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 111 VLKGLEYLHSNGQIHRDIKAGNILLGED--GSVKIADFGVSASLADG 155 (267)
T ss_pred HHHHHHHHHhCCeecCCCCHHhEEEcCC--CCEEEcccchHHHhccC
Confidence 44 778899999999999999999865 88999999998776543
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.2e-10 Score=124.43 Aligned_cols=147 Identities=16% Similarity=0.120 Sum_probs=96.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|+||+|+.. +|+.||||+.+........ +.+ ..-++.+|+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~-~~~------------------------------~~~~~~~e~ 54 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSE-QEE------------------------------VVEALRKEI 54 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchh-HHH------------------------------HHHHHHHHH
Confidence 67999999999999964 8999999987643211100 000 001244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++++. .-+.+..++. ....+++|||++|.+|.++... ....+...+...+.+++ +
T Consensus 55 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~al 116 (268)
T cd06630 55 RLMARLNHP-----------------HIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSK-YGAFKEAVIINYTEQLLRGL 116 (268)
T ss_pred HHHHHcCCC-----------------ceehhhceeccCCeEEEEEeccCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHH
Confidence 666655331 0111112222 4567899999999999887542 22344444444444433 6
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|++|.||+++.+ +..++|+|||++..+..
T Consensus 117 ~~LH~~~i~H~~i~~~nil~~~~-~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 117 SYLHENQIIHRDVKGANLLIDST-GQRLRIADFGAAARLAA 156 (268)
T ss_pred HHHHhCCeecCCCCHHHEEEcCC-CCEEEEccccccccccc
Confidence 78999999999999999999754 24699999999877754
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.3e-10 Score=126.39 Aligned_cols=143 Identities=17% Similarity=0.192 Sum_probs=91.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-||+|++|.||+|+.. +|+.||||+.+...... .....+.+|.
T Consensus 7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~-----------------------------------~~~~~~~~E~ 51 (295)
T cd07837 7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEE-----------------------------------GIPPTALREI 51 (295)
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEeehhhcccc-----------------------------------CCchHHHHHH
Confidence 56999999999999976 79999999764321100 0001133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEec-C-----CceEEEeecCCcCCCChHHHhh----cCCCHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-S-----ETVLILEFMDGIRLNDCESLEA----FGVNKQKVVE 159 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-~-----~~vLvmE~i~G~~L~~~~~~~~----~~~~~~~l~~ 159 (864)
..+.++.+. ..-+.+..+... . ..+++|||++| ++.++..... ..+....+..
T Consensus 52 ~~l~~l~~~----------------~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~ 114 (295)
T cd07837 52 SLLQMLSES----------------IYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKS 114 (295)
T ss_pred HHHHHccCC----------------CCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHH
Confidence 555554321 001122222221 1 15899999997 5665543221 1234555555
Q ss_pred HHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 160 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 160 ~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+.+++ +..+|..|++|+|+||+||+++.+ ++.++|+|||++..+.
T Consensus 115 ~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~-~~~~kl~dfg~~~~~~ 162 (295)
T cd07837 115 FMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQ-KGLLKIADLGLGRAFS 162 (295)
T ss_pred HHHHHHHHHHHHHHCCeeecCCChHHEEEecC-CCeEEEeecccceecC
Confidence 555544 788999999999999999999862 4889999999987654
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.9e-11 Score=135.82 Aligned_cols=145 Identities=13% Similarity=0.142 Sum_probs=107.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-+|.|+||.++..+.+ ++..+|+|..+-.-. .+.-++ +-.+|.
T Consensus 10 ~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~-----------------------------t~~~r~------~A~~E~ 54 (426)
T KOG0589|consen 10 RQVGRGAFGSALLVRHKSDDKLYVLKKINLEKL-----------------------------TEPERR------SAIQEM 54 (426)
T ss_pred hhcCccccchhhhhhhccCCceEEEEEEecccc-----------------------------CchhhH------HHHHHH
Confidence 56999999999999876 789999997541110 000011 223355
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCC-ceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH-
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSE-TVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~-~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~- 165 (864)
.-+.++++ ...|..++.+. .+. .+|||+|++|+++.+.....+ .-+..+++.+.++++.
T Consensus 55 ~lis~~~h-----------------P~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~ 117 (426)
T KOG0589|consen 55 DLLSKLLH-----------------PNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILL 117 (426)
T ss_pred HHHHhccC-----------------CCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHH
Confidence 55555433 22344555443 455 689999999999999876544 3467888999999877
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
+..+|+..|+|||+|+.|||++.+ +.|+|-|||+++.+.++.
T Consensus 118 av~ylH~~~iLHRDlK~~Nifltk~--~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 118 AVNYLHENRVLHRDLKCANIFLTKD--KKVKLGDFGLAKILNPED 160 (426)
T ss_pred HHHHHHhhhhhcccchhhhhhcccc--CceeecchhhhhhcCCch
Confidence 888999999999999999999976 789999999999998875
|
|
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.16 E-value=7.5e-11 Score=127.55 Aligned_cols=143 Identities=18% Similarity=0.171 Sum_probs=95.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|+||+|+.+ +|+.||||+.+...... +.. -.+.+|.
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~-----------------------------~~~------~~~~~e~ 51 (288)
T cd07833 7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDE-----------------------------DVK------KTALREV 51 (288)
T ss_pred EEecccCCeeEEEEEeCCCCcEEEEehhhhhcccc-----------------------------cch------hHHHHHH
Confidence 67999999999999976 78999999765321100 000 1133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.+. .-+.+..++. ....+++|||++|..+..+.. .....+...+...+.+++ +
T Consensus 52 ~~l~~l~~~-----------------~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l 113 (288)
T cd07833 52 KVLRQLRHE-----------------NIVNLKEAFRRKGRLYLVFEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAI 113 (288)
T ss_pred HHHHhcCCC-----------------CeeehhheEEECCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHH
Confidence 555554321 0122222222 455789999999866654432 223455555555555444 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+...
T Consensus 114 ~~LH~~~i~H~dl~~~ni~~~~~--~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 114 AYCHSHNIIHRDIKPENILVSES--GVLKLCDFGFARALRAR 153 (288)
T ss_pred HHHHHCCeecCCCCHHHeEECCC--CCEEEEeeecccccCCC
Confidence 88899999999999999999865 89999999998876554
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.16 E-value=2e-10 Score=110.88 Aligned_cols=132 Identities=18% Similarity=0.275 Sum_probs=92.6
Q ss_pred ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 10 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.+++++|+++.||+++.. ++.++||+.++... +.++..|.
T Consensus 3 ~~~i~~g~~~~v~~~~~~-~~~~~iK~~~~~~~---------------------------------------~~~~~~e~ 42 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTK-DEDYVLKINPSREK---------------------------------------GADREREV 42 (155)
T ss_pred ceecccccccceEEEEec-CCeEEEEecCCCCc---------------------------------------hhHHHHHH
Confidence 367999999999999974 48899998765432 01245566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..++++++. ...+|+++. .+..+++|||++|..+..... .....+...+.+.
T Consensus 43 ~~~~~l~~~------------------~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~~~-----~~~~~~~~~~~~~- 98 (155)
T cd05120 43 AILQLLARK------------------GLPVPKVLASGESDGWSYLLMEWIEGETLDEVSE-----EEKEDIAEQLAEL- 98 (155)
T ss_pred HHHHHHHHc------------------CCCCCeEEEEcCCCCccEEEEEecCCeecccCCH-----HHHHHHHHHHHHH-
Confidence 667776652 234666664 346899999999998876400 1122333433333
Q ss_pred HHHHHh---cCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYV---DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~---~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|. .|++|+|+||+||+++.. +.++++|||.+...++
T Consensus 99 l~~lh~~~~~~i~H~Dl~~~Nil~~~~--~~~~l~Df~~~~~~~~ 141 (155)
T cd05120 99 LAKLHQLPLLVLCHGDLHPGNILVDDG--KILGIIDWEYAGYGPP 141 (155)
T ss_pred HHHHhCCCceEEEecCCCcceEEEECC--cEEEEEecccccCCCh
Confidence 556665 589999999999999863 7899999999886554
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.1e-10 Score=124.41 Aligned_cols=138 Identities=14% Similarity=0.144 Sum_probs=93.7
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||.|++|.||+|+.++++.|++|+.+........ ++..|..
T Consensus 12 ~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~-------------------------------------~~~~e~~ 54 (261)
T cd05148 12 RKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQ-------------------------------------DFQKEVQ 54 (261)
T ss_pred hhhccCCCccEEEeEecCCCcEEEEeccccchhhHH-------------------------------------HHHHHHH
Confidence 679999999999999888999999986533211000 1233443
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~ 165 (864)
.+.++.+ ..+.+++ . ....+++|||++|.+|.+...... ...+...+...+.+++
T Consensus 55 ~l~~l~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~ 114 (261)
T cd05148 55 ALKRLRH--------------------KHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVA 114 (261)
T ss_pred HHhcCCC--------------------cchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 3333321 1122222 2 456789999999999988754321 2234445555444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+..+..
T Consensus 115 ~al~~lH~~~i~h~dl~~~nilv~~~--~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 115 EGMAYLEEQNSIHRDLAARNILVGED--LVCKVADFGLARLIKE 156 (261)
T ss_pred HHHHHHHHCCeeccccCcceEEEcCC--ceEEEccccchhhcCC
Confidence 778899999999999999999865 8999999999876643
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.5e-10 Score=125.26 Aligned_cols=80 Identities=14% Similarity=0.172 Sum_probs=59.0
Q ss_pred cCCceEEEeecCCcCCCChHHHhh---------------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEcc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 188 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 188 (864)
....++++||+++.+|.++..... ...+...+...+.++. +..+|..|++|+|+||.||++.+
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD 159 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecC
Confidence 356789999999998887754221 1133334444444433 78899999999999999999986
Q ss_pred CCCCceEEEecccccccCh
Q 002927 189 DPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 189 ~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +.++|+|||+++.+..
T Consensus 160 ~--~~~kl~Dfg~~~~~~~ 176 (283)
T cd05091 160 K--LNVKISDLGLFREVYA 176 (283)
T ss_pred C--CceEeccccccccccc
Confidence 5 8899999999887643
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.8e-10 Score=126.20 Aligned_cols=142 Identities=14% Similarity=0.080 Sum_probs=95.4
Q ss_pred ccccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 10 ETPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
.+.||.|++|+||+|+.. ++..||||+.+........ -
T Consensus 40 ~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~ 83 (302)
T cd05055 40 GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSER------------------------------------E 83 (302)
T ss_pred cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHH------------------------------------H
Confidence 367999999999999842 4568999987654321110 0
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhc-CCCHHHHHHH
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEE 160 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~-~~~~~~l~~~ 160 (864)
.+.+|.+.+.++.. +++ +.+...+. ....+|+|||+.|.+|.++...... ..+...+...
T Consensus 84 ~~~~E~~~l~~l~~-----------------h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i 146 (302)
T cd05055 84 ALMSELKIMSHLGN-----------------HENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSF 146 (302)
T ss_pred HHHHHHHHHHhccC-----------------CCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHH
Confidence 24456666555521 111 22222222 5568999999999999887543221 2455555555
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 147 ~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~--~~~~l~dfg~~~~~~ 192 (302)
T cd05055 147 SYQVAKGMAFLASKNCIHRDLAARNVLLTHG--KIVKICDFGLARDIM 192 (302)
T ss_pred HHHHHHHHHHHHHCCeehhhhccceEEEcCC--CeEEECCCccccccc
Confidence 44443 778999999999999999999854 789999999987654
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.16 E-value=9.7e-11 Score=126.82 Aligned_cols=138 Identities=15% Similarity=0.172 Sum_probs=89.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.. +|+.||+|+.+........ . .+.+|+
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------~------~~~~e~ 50 (286)
T cd06622 7 DELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKF------------------------------N------QIIMEL 50 (286)
T ss_pred hhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHH------------------------------H------HHHHHH
Confidence 57999999999999986 8999999976533211100 0 012233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHh--hcCCCHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE--AFGVNKQKVVEEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~--~~~~~~~~l~~~~~~ 163 (864)
..+.++.+. .+.+++ . ....++||||++|.+|..+.... ....+...+...+.+
T Consensus 51 ~~l~~~~~~--------------------~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 110 (286)
T cd06622 51 DILHKAVSP--------------------YIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYA 110 (286)
T ss_pred HHHHhcCCC--------------------cHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHH
Confidence 333322110 111111 1 34568999999999997764321 113455444444444
Q ss_pred HH--HHHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 164 AY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 164 ~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
++ +..+|. .|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 111 i~~~l~~LH~~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~ 154 (286)
T cd06622 111 VVKGLKFLKEEHNIIHRDVKPTNVLVNGN--GQVKLCDFGVSGNLV 154 (286)
T ss_pred HHHHHHHHHhcCCEeeCCCCHHHEEECCC--CCEEEeecCCccccc
Confidence 33 667785 699999999999999865 899999999987653
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.16 E-value=9.4e-11 Score=124.97 Aligned_cols=140 Identities=14% Similarity=0.180 Sum_probs=94.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++|++|++|.||+|+.. +|+.|+||+.+..... ..+. + .+..|.
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~---------------------------~------~~~~e~ 50 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND--PKTI---------------------------K------EIADEM 50 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcEEEEEEEECcccc--hHHH---------------------------H------HHHHHH
Confidence 68999999999999975 7999999997654321 0000 0 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++++ + .+.+++. ....++||||++|.+|.++.... .......+...+.+++
T Consensus 51 ~~~~~l~~------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~ 109 (264)
T cd06626 51 KVLELLKH------------------P--NLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHG-RILDEHVIRVYTLQLL 109 (264)
T ss_pred HHHHhCCC------------------C--ChhheeeeEecCCEEEEEEecCCCCcHHHHHhhc-CCCChHHHHHHHHHHH
Confidence 44444322 1 1222221 45678999999999999875422 1234444443333333
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+|++|+||+++.+ +.++|+|||.+..+...
T Consensus 110 ~~l~~lh~~~i~H~dl~~~nil~~~~--~~~kl~d~g~~~~~~~~ 152 (264)
T cd06626 110 EGLAYLHSHGIVHRDIKPANIFLDHN--GVIKLGDFGCAVKLKNN 152 (264)
T ss_pred HHHHHHHHCCcccCCCCHHHEEECCC--CCEEEcccccccccCCC
Confidence 678899999999999999999864 89999999998877543
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.6e-10 Score=127.30 Aligned_cols=147 Identities=17% Similarity=0.150 Sum_probs=93.4
Q ss_pred cccccccccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 3 GMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 3 ~~F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
++|..+ +-|+.|++|.||+|+.. +|+.|+||+.......... .
T Consensus 21 ~~~~~~--~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~-~--------------------------------- 64 (313)
T cd06633 21 EIFVGL--HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNE-K--------------------------------- 64 (313)
T ss_pred HHhhcc--eeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchH-H---------------------------------
Confidence 444444 34999999999999975 7999999986532110000 0
Q ss_pred hccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHH
Q 002927 82 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 160 (864)
Q Consensus 82 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 160 (864)
..++..|...+.++++. .-+.+..++. ....+++|||+.| ++.+.........+...+...
T Consensus 65 ~~~~~~E~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~ 126 (313)
T cd06633 65 WQDIIKEVKFLQQLKHP-----------------NTIEYKGCYLKEHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAI 126 (313)
T ss_pred HHHHHHHHHHHHhCCCC-----------------CCccEEEEEEeCCEEEEEEecCCC-CHHHHHHhcCCCCCHHHHHHH
Confidence 00133455555554321 1122333333 4567899999976 444443322333455555544
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++...
T Consensus 127 ~~qi~~al~~LH~~gi~H~dl~p~nili~~~--~~~kL~dfg~~~~~ 171 (313)
T cd06633 127 THGALQGLAYLHSHNMIHRDIKAGNILLTEP--GQVKLADFGSASKS 171 (313)
T ss_pred HHHHHHHHHHHHHCCeecCCCChhhEEECCC--CCEEEeecCCCccc
Confidence 44433 788899999999999999999865 89999999987643
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.15 E-value=7.5e-11 Score=128.93 Aligned_cols=78 Identities=23% Similarity=0.364 Sum_probs=60.0
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+++|||++|.+|.+... ....+...+...+.+++ +..+|..|++|+|++|+||+++.+ +.++|+|||++.
T Consensus 90 ~~~~~iv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~--~~~kL~dfg~~~ 165 (297)
T cd06659 90 GEELWVLMEFLQGGALTDIVS--QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLD--GRVKLSDFGFCA 165 (297)
T ss_pred CCeEEEEEecCCCCCHHHHHh--hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccC--CcEEEeechhHh
Confidence 456789999999999887643 33345555555444444 778899999999999999999865 899999999887
Q ss_pred ccCh
Q 002927 204 KLSS 207 (864)
Q Consensus 204 ~l~~ 207 (864)
.+..
T Consensus 166 ~~~~ 169 (297)
T cd06659 166 QISK 169 (297)
T ss_pred hccc
Confidence 6543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.1e-10 Score=126.36 Aligned_cols=80 Identities=16% Similarity=0.184 Sum_probs=60.1
Q ss_pred cCCceEEEeecCCcCCCChHHHhh---------------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEcc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 188 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 188 (864)
....+++|||++|.+|.++..... .......+...+.++. +..+|+.|++|+|+||+||+++.
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~ 169 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTE 169 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcC
Confidence 455789999999999988754321 1234444444444433 77899999999999999999986
Q ss_pred CCCCceEEEecccccccCh
Q 002927 189 DPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 189 ~~~g~i~LiDFG~~~~l~~ 207 (864)
+ ++++|+|||+++.+..
T Consensus 170 ~--~~~kL~Dfg~~~~~~~ 186 (314)
T cd05099 170 D--NVMKIADFGLARGVHD 186 (314)
T ss_pred C--CcEEEccccccccccc
Confidence 5 8999999999987643
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.5e-10 Score=124.14 Aligned_cols=79 Identities=20% Similarity=0.256 Sum_probs=61.0
Q ss_pred cCCceEEEeecCCcCCCChHHHhh----------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEA----------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHR 193 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~----------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~ 193 (864)
....+++|||++|.+|.++..... ...+...+...+.++. +..+|..|++|+|+||.||+++.+ +.
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~--~~ 168 (296)
T cd05051 91 DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKN--YT 168 (296)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCC--Cc
Confidence 467899999999999987754221 1245555555555544 778899999999999999999865 89
Q ss_pred eEEEecccccccC
Q 002927 194 PILLDFGLTKKLS 206 (864)
Q Consensus 194 i~LiDFG~~~~l~ 206 (864)
++|+|||++..+.
T Consensus 169 ~~l~dfg~~~~~~ 181 (296)
T cd05051 169 IKIADFGMSRNLY 181 (296)
T ss_pred eEEccccceeecc
Confidence 9999999887653
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.8e-10 Score=128.59 Aligned_cols=139 Identities=19% Similarity=0.273 Sum_probs=90.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++||.|++|.||+|+.. +|+.||||+.+....... ... .+.+|+
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------~~~------~~~~E~ 65 (343)
T cd07880 21 KQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSEL-----------------------------FAK------RAYREL 65 (343)
T ss_pred EEeeecCCeEEEEEEECCCCcEEEEEEecccccchH-----------------------------HHH------HHHHHH
Confidence 68999999999999965 899999998653211100 000 123355
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
+.+.++.+.. -+.+..++. ....+|||||+ |.+|.++.. ....+...+...+.
T Consensus 66 ~~l~~l~h~~-----------------iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~--~~~l~~~~~~~i~~ 125 (343)
T cd07880 66 RLLKHMKHEN-----------------VIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMK--HEKLSEDRIQFLVY 125 (343)
T ss_pred HHHHhcCCCC-----------------ccceeeeecCCccccccceEEEEEecC-CCCHHHHHh--cCCCCHHHHHHHHH
Confidence 5555543210 112222221 23458999999 667766532 23445555444444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 126 qi~~al~~LH~~gi~H~dlkp~Nill~~~--~~~kl~dfg~~~~~~ 169 (343)
T cd07880 126 QMLKGLKYIHAAGIIHRDLKPGNLAVNED--CELKILDFGLARQTD 169 (343)
T ss_pred HHHHHHHHHHhCCeecCCCCHHHEEEcCC--CCEEEeecccccccc
Confidence 443 788999999999999999999865 899999999987654
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.6e-10 Score=123.63 Aligned_cols=140 Identities=19% Similarity=0.200 Sum_probs=97.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.+++|++|+||+|... +++.|++|+.+.... +. -.+..|.
T Consensus 25 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~~---------------------------------~~~~~e~ 66 (286)
T cd06614 25 EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-----NK---------------------------------ELIINEI 66 (286)
T ss_pred HhccCCCCeEEEEEEEccCCcEEEEEEEecCch-----hH---------------------------------HHHHHHH
Confidence 67999999999999986 799999998765432 00 0122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+...+. ....+++|||++|.+|.++........+...+...+.+++ +
T Consensus 67 ~~l~~l~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L 129 (286)
T cd06614 67 LIMKDCKHP-----------------NIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGL 129 (286)
T ss_pred HHHHHCCCC-----------------CeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHH
Confidence 444443220 1122233222 5678899999999999988654322456555555555444 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 130 ~~lH~~gi~H~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~ 168 (286)
T cd06614 130 EYLHSQNVIHRDIKSDNILLSKD--GSVKLADFGFAAQLTK 168 (286)
T ss_pred HHHHhCCeeeCCCChhhEEEcCC--CCEEECccchhhhhcc
Confidence 78899999999999999999865 8999999998876554
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.2e-10 Score=121.78 Aligned_cols=142 Identities=17% Similarity=0.118 Sum_probs=95.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCC-hHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQG-IKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~-i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+.||.|++|+|+.++.. +|+.|++|..... .... ..-++.+|
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~------------------------------------~~~~~~~e 49 (256)
T cd08221 6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEK------------------------------------ERRDALNE 49 (256)
T ss_pred eEecccCCceEEEEEEcCCCcEEEEEEEeecccchh------------------------------------HHHHHHHH
Confidence 67999999999999965 7999999975321 1110 00113456
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHHH-
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~~- 165 (864)
...++++.+. .-+.+...+. ....+++|||++|.+|.+..... ....+...+...+.+++
T Consensus 50 ~~~l~~~~h~-----------------~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~ 112 (256)
T cd08221 50 IVILSLLQHP-----------------NIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVS 112 (256)
T ss_pred HHHHHhCCCC-----------------CeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHH
Confidence 5555554221 1122222222 45678999999999998875432 12344555555444433
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+.....
T Consensus 113 ~l~~lh~~~i~h~dl~p~ni~~~~~--~~~kl~d~~~~~~~~~ 153 (256)
T cd08221 113 AVSYIHKAGILHRDIKTLNIFLTKA--GLIKLGDFGISKILGS 153 (256)
T ss_pred HHHHHHhCCccccCCChHhEEEeCC--CCEEECcCcceEEccc
Confidence 678899999999999999999865 8899999999876644
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.7e-10 Score=126.00 Aligned_cols=139 Identities=14% Similarity=0.211 Sum_probs=94.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|+.. +|+.|+||...-..... .-.+.+|.
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~-------------------------------------~~~~~~e~ 67 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPK-------------------------------------KELIINEI 67 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCch-------------------------------------HHHHHHHH
Confidence 57999999999999965 89999999753211000 00123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+..+++ +.+ .+-..+. ....++||||++|.+|.++.. ....+...+...+.+++
T Consensus 68 ~~l~~l~h------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~l~~~~~~~i~~~l~~a 127 (296)
T cd06655 68 LVMKELKN------------------PNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVT--ETCMDEAQIAAVCRECLQA 127 (296)
T ss_pred HHHHhcCC------------------CceeeeeeeEecCceEEEEEEecCCCcHHHHHH--hcCCCHHHHHHHHHHHHHH
Confidence 44444322 121 1111222 456889999999999987643 33455555555544443
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+...
T Consensus 128 l~~LH~~~i~H~dL~p~Nili~~~--~~~kl~dfg~~~~~~~~ 168 (296)
T cd06655 128 LEFLHANQVIHRDIKSDNVLLGMD--GSVKLTDFGFCAQITPE 168 (296)
T ss_pred HHHHHHCCcccCCCCHHHEEECCC--CCEEEccCccchhcccc
Confidence 778899999999999999999865 89999999998876543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.5e-10 Score=125.85 Aligned_cols=141 Identities=15% Similarity=0.155 Sum_probs=96.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|+.+ +|+.||||..+...... . .+..+.+|.
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~------~~~~~~~e~ 55 (293)
T cd07843 11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKE-----------------------------G------FPITSLREI 55 (293)
T ss_pred hhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccc-----------------------------c------chhhHHHHH
Confidence 78999999999999986 79999999765332110 0 001133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-c--CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~--~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++++ +.+ .+..... . ...+|+|||++| +|.++........+...+...+.+++
T Consensus 56 ~~l~~l~h------------------~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~ 116 (293)
T cd07843 56 NILLKLQH------------------PNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLL 116 (293)
T ss_pred HHHHhcCC------------------CCEEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 55555432 122 2222222 3 678899999986 66665443333456666666555554
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|+||+++.+ +.++|+|||++..+..
T Consensus 117 ~aL~~LH~~~i~H~dl~p~nili~~~--~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 117 SGVAHLHDNWILHRDLKTSNLLLNNR--GILKICDFGLAREYGS 158 (293)
T ss_pred HHHHHHHHCCeeeccCCHHHEEECCC--CcEEEeecCceeeccC
Confidence 788999999999999999999865 8999999999887654
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.4e-11 Score=144.35 Aligned_cols=76 Identities=22% Similarity=0.275 Sum_probs=57.0
Q ss_pred CCceEEEeecCCcCCCChHHHhhcCCCHHHHHH-HHHHH--HHHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 127 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVE-EITRA--YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~-~~~~~--~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
...||||||++|++|-.++. ..+.-+++.++ .++.+ .+..||+-|+||||+||.|||++.. |.|+|.|||.+-
T Consensus 148 ~~LYlVMdY~pGGDlltLlS--k~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~--GHikLADFGsCl 223 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLS--KFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKS--GHIKLADFGSCL 223 (1317)
T ss_pred cceEEEEecccCchHHHHHh--hcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEeccc--CcEeeccchhHH
Confidence 34579999999999887743 33322333333 22222 2788899999999999999999976 999999999877
Q ss_pred ccC
Q 002927 204 KLS 206 (864)
Q Consensus 204 ~l~ 206 (864)
.+.
T Consensus 224 km~ 226 (1317)
T KOG0612|consen 224 KMD 226 (1317)
T ss_pred hcC
Confidence 765
|
|
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.14 E-value=2e-10 Score=122.92 Aligned_cols=140 Identities=19% Similarity=0.247 Sum_probs=97.9
Q ss_pred cccccccceeeEEEEec-----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV-----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+-||.|++|.||+|+++ .+..|+||+..+...... .-+|
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~------------------------------------~~~~ 48 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEE------------------------------------EEEF 48 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHH------------------------------------HHHH
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccccccc------------------------------------ceee
Confidence 46999999999999986 267899999876433221 1124
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITR 163 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~ 163 (864)
.+|++.+.++++. .-+.+-.+.. .....+||||+++.+|.+..... ....+...+...+.+
T Consensus 49 ~~e~~~l~~l~h~-----------------ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~ 111 (259)
T PF07714_consen 49 LNEIQILRKLRHP-----------------NIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQ 111 (259)
T ss_dssp HHHHHHHHTHSBT-----------------TBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHH
T ss_pred eeccccccccccc-----------------cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4566666665321 1122222222 45678999999999999886543 345666666666666
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+. +..+|..+++|+|++|.||+++.+ +.++|.|||+....
T Consensus 112 i~~~l~~Lh~~~iiH~~l~~~nill~~~--~~~Kl~~f~~~~~~ 153 (259)
T PF07714_consen 112 IAEALSYLHSNNIIHGNLSPSNILLDSN--GQVKLSDFGLSRPI 153 (259)
T ss_dssp HHHHHHHHHHTTEEEST-SGGGEEEETT--TEEEEESTTTGEET
T ss_pred cccccccccccccccccccccccccccc--cccccccccccccc
Confidence 55 888999999999999999999965 89999999998876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.5e-10 Score=126.41 Aligned_cols=138 Identities=14% Similarity=0.182 Sum_probs=93.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.. +|+.|+||.......... -.+.+|+
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~-------------------------------------~~~~~e~ 68 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK-------------------------------------ELIINEI 68 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchH-------------------------------------HHHHHHH
Confidence 46999999999999965 799999997643221100 0133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+..+. ++++ .+...+. ....++||||++|.+|.++.. ........+...+.++.
T Consensus 69 ~~l~~~~------------------h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~i~~ql~~a 128 (296)
T cd06654 69 LVMRENK------------------NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQA 128 (296)
T ss_pred HHHHhCC------------------CCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHH--hcCCCHHHHHHHHHHHHHH
Confidence 4443332 1222 1112222 456889999999999988753 23345555555444443
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 129 L~~LH~~gi~H~dLkp~Nill~~~--~~~kl~dfg~~~~~~~ 168 (296)
T cd06654 129 LEFLHSNQVIHRDIKSDNILLGMD--GSVKLTDFGFCAQITP 168 (296)
T ss_pred HHHHHHCCcccCCCCHHHEEEcCC--CCEEECccccchhccc
Confidence 678899999999999999999865 8999999998876544
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.6e-10 Score=123.71 Aligned_cols=140 Identities=15% Similarity=0.153 Sum_probs=93.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||++..+ +++.||+|+........ .+-++.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~------------------------------------~~~~~~~e~ 50 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPD------------------------------------LQKQILREL 50 (287)
T ss_pred EEeccCCceEEEEEEECCCCeEEEEEEEecCCchH------------------------------------HHHHHHHHH
Confidence 67999999999999986 78999999876432211 011134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe---cCCceEEEeecCCcCCCChHHHh---hcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ---SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l~~~~~ 162 (864)
+.+.++.+ +.+ .+...+. ....+|||||++|.+|.++.... ........+...+.
T Consensus 51 ~~l~~l~h------------------~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~ 112 (287)
T cd06621 51 EINKSCKS------------------PYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAE 112 (287)
T ss_pred HHHHhCCC------------------CCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 55555432 222 2222222 23568999999999998764321 11233344444444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 113 ~i~~~L~~lH~~~i~H~dl~~~nil~~~~--~~~~l~dfg~~~~~~ 156 (287)
T cd06621 113 SVLKGLSYLHSRKIIHRDIKPSNILLTRK--GQVKLCDFGVSGELV 156 (287)
T ss_pred HHHHHHHHHHHCCcccCCCCHHHEEEecC--CeEEEeecccccccc
Confidence 333 678899999999999999999865 789999999987654
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.5e-10 Score=120.65 Aligned_cols=141 Identities=19% Similarity=0.164 Sum_probs=97.5
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+.|+.|++|.||+|+.. +|+.|+||+.+...... ... + .+.+|
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~---------------------------~------~~~~e 49 (260)
T cd06606 5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSE--EEL---------------------------E------ALERE 49 (260)
T ss_pred eeEeeecCceEEEEEEECCCCcEEEEEEeeccccch--HHH---------------------------H------HHHHH
Confidence 378999999999999987 79999999876443210 000 0 12334
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-c--CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~--~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
...+.++.+ + .+.+++ . . ...+++|||++|.+|.++.... ...+...+...+.
T Consensus 50 ~~~l~~l~~------------------~--~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ 108 (260)
T cd06606 50 IRILSSLQH------------------P--NIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKF-GKLPEPVIRKYTR 108 (260)
T ss_pred HHHHHHcCC------------------C--CEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHH
Confidence 444444421 1 122222 2 3 5678999999999998875432 2455555555444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+++ +..+|+.|++|+|++|.||+++.+ +.++|+|||++......
T Consensus 109 ~l~~~l~~lh~~~~~h~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 109 QILEGLAYLHSNGIVHRDIKGANILVDSD--GVVKLADFGCAKRLGDI 154 (260)
T ss_pred HHHHHHHHHHHCCccccCCCHHHEEEcCC--CCEEEcccccEEecccc
Confidence 444 778899999999999999999964 89999999998877654
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.5e-10 Score=125.49 Aligned_cols=137 Identities=20% Similarity=0.230 Sum_probs=90.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|+||+|+.. +|+.||+|+.......... + ++.+|.
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------~------~~~~E~ 54 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVR------------------------------K------QILREL 54 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHH------------------------------H------HHHHHH
Confidence 57999999999999976 7999999987643221111 1 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+..+++ + .+.+++. ....+|||||++|.+|.++.... .......+...+.++.
T Consensus 55 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~ 113 (284)
T cd06620 55 QIMHECRS------------------P--YIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKG-GPIPVEILGKIAVAVV 113 (284)
T ss_pred HHHHHcCC------------------C--CcceEeeeEecCCEEEEEEecCCCCCHHHHHHhc-cCCCHHHHHHHHHHHH
Confidence 44444322 1 1222221 46678999999999998764321 2233333333333322
Q ss_pred --HHHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|. .|++|+|++|.||+++.+ ++++|+|||++..+.
T Consensus 114 ~~l~~LH~~~~i~H~dl~p~nil~~~~--~~~~l~d~gl~~~~~ 155 (284)
T cd06620 114 EGLTYLYNVHRIMHRDIKPSNILVNSR--GQIKLCDFGVSGELI 155 (284)
T ss_pred HHHHHHHHhcCeeccCCCHHHEEECCC--CcEEEccCCcccchh
Confidence 567775 699999999999999865 899999999986553
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.9e-10 Score=128.93 Aligned_cols=139 Identities=18% Similarity=0.290 Sum_probs=88.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+........-. ...+.+|.
T Consensus 22 ~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-----------------------------------~~~~~~E~ 66 (353)
T cd07850 22 KPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTH-----------------------------------AKRAYREL 66 (353)
T ss_pred EEeccCCCEEEEEEEECCCCCEEEEEecCccccChhH-----------------------------------HHHHHHHH
Confidence 78999999999999976 8999999975321110000 00122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
..+.++.+.. -+.+...+. ....+|||||++| +|.+... ...+...+...+.
T Consensus 67 ~~l~~l~h~~-----------------iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~---~~l~~~~~~~~~~ 125 (353)
T cd07850 67 VLMKLVNHKN-----------------IIGLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQ---MDLDHERMSYLLY 125 (353)
T ss_pred HHHHhcCCCC-----------------CcceeeeeccCCCccccCcEEEEEeccCC-CHHHHHh---hcCCHHHHHHHHH
Confidence 4444442210 111111111 1235899999986 4444322 1245555444444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 126 ql~~aL~~LH~~gi~H~dlkp~Nil~~~~--~~~kL~Dfg~~~~~~~ 170 (353)
T cd07850 126 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTAGT 170 (353)
T ss_pred HHHHHHHHHHhCCeeeCCCCHHHEEECCC--CCEEEccCccceeCCC
Confidence 443 788999999999999999999865 8999999999886653
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.5e-10 Score=122.18 Aligned_cols=140 Identities=15% Similarity=0.114 Sum_probs=92.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHH-HHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTII-LEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~-~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+-|++|++|.||+|+.+ +|+.||||+.+......- ...+ -.+.+|
T Consensus 8 ~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~---------------------------------~~~~~E 54 (265)
T cd06652 8 KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEV---------------------------------NALECE 54 (265)
T ss_pred eEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHH---------------------------------HHHHHH
Confidence 67999999999999976 799999997653211100 0000 014456
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---c---CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---S---SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~---~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
+..+.++.+ +. +++++. . ...+++|||++|.+|.+..... ...+...+...+.
T Consensus 55 ~~~l~~l~h------------------~~--i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ 113 (265)
T cd06652 55 IQLLKNLLH------------------ER--IVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSY-GALTENVTRKYTR 113 (265)
T ss_pred HHHHHhcCC------------------CC--eeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHH
Confidence 666665532 11 222222 1 2356899999999998875422 2234444444333
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
++. +..+|+.|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 114 ~l~~~l~~lH~~~i~H~dl~p~nil~~~~--~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 114 QILEGVSYLHSNMIVHRDIKGANILRDSV--GNVKLGDFGASKRLQ 157 (265)
T ss_pred HHHHHHHHHHhCCEecCCCCHHHEEecCC--CCEEECcCccccccc
Confidence 333 778899999999999999999865 899999999887653
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.14 E-value=8.3e-11 Score=127.19 Aligned_cols=139 Identities=20% Similarity=0.232 Sum_probs=92.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|+||+|+.+ +|+.||||+........ ...+ ++.+|.
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-----------------------------~~~~------~~~~e~ 51 (286)
T cd07846 7 GLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-----------------------------MVKK------IAMREI 51 (286)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-----------------------------hhhH------HHHHHH
Confidence 67999999999999986 69999999743221110 0000 122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ ..+++++. ....++||||++|..+.++... ....+...+...+.+++
T Consensus 52 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~ 110 (286)
T cd07846 52 RMLKQLRH--------------------ENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKY-PNGLDESRVRKYLFQIL 110 (286)
T ss_pred HHHHhcCC--------------------cchhhHHHhcccCCeEEEEEecCCccHHHHHHhc-cCCCCHHHHHHHHHHHH
Confidence 33333221 11222221 3457899999999888765432 22355666666555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|.||+++++ +.++|+|||++..+..
T Consensus 111 ~~l~~LH~~~i~h~~l~p~ni~~~~~--~~~~l~dfg~~~~~~~ 152 (286)
T cd07846 111 RGIEFCHSHNIIHRDIKPENILVSQS--GVVKLCDFGFARTLAA 152 (286)
T ss_pred HHHHHHHHCCccccCCCHHHEEECCC--CcEEEEeeeeeeeccC
Confidence 778899999999999999999865 8999999999877644
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.2e-10 Score=124.45 Aligned_cols=142 Identities=20% Similarity=0.241 Sum_probs=94.0
Q ss_pred cccccccceeeEEEEecC------CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLVD------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||.|++|.||+|..+. ...||+|+.+....... ..+
T Consensus 18 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~------------------------------------~~~ 61 (293)
T cd05053 18 KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKD------------------------------------LSD 61 (293)
T ss_pred eEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHH------------------------------------HHH
Confidence 689999999999999642 36899998765432110 011
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-------------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA------------- 149 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~------------- 149 (864)
+.+|+..+.++.. ++. +.+..++. ....+++|||++|.+|.++.....
T Consensus 62 ~~~E~~~l~~l~~-----------------h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 124 (293)
T cd05053 62 LVSEMEMMKMIGK-----------------HKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRP 124 (293)
T ss_pred HHHHHHHHHhhcC-----------------CCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccc
Confidence 3345544444421 111 22233333 456789999999999987754211
Q ss_pred --cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 150 --FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 150 --~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
...+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 125 ~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~--~~~kL~Dfg~~~~~~~ 184 (293)
T cd05053 125 PEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTED--HVMKIADFGLARDIHH 184 (293)
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCC--CeEEeCcccccccccc
Confidence 1233444444444433 788899999999999999999865 8999999999886543
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.3e-10 Score=123.02 Aligned_cols=140 Identities=17% Similarity=0.152 Sum_probs=96.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.. +|+.||||+........ + .-++.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~---------------------------------~~~~~~e~ 50 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAED---E---------------------------------IEDIQQEI 50 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccch---H---------------------------------HHHHHHHH
Confidence 67999999999999976 79999999864321100 0 00133454
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+..+.+ +.+ .+...+. ....++||||++|.+|.++... ...+...+...+.+++
T Consensus 51 ~~l~~l~h------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~ 110 (274)
T cd06609 51 QFLSQCRS------------------PYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKP--GKLDETYIAFILREVLLG 110 (274)
T ss_pred HHHHHcCC------------------CCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhh--cCCCHHHHHHHHHHHHHH
Confidence 44444432 122 1112222 5667899999999999877542 2455555555555544
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+...
T Consensus 111 l~~lh~~~i~h~dl~p~ni~i~~~--~~~~l~d~g~~~~~~~~ 151 (274)
T cd06609 111 LEYLHEEGKIHRDIKAANILLSEE--GDVKLADFGVSGQLTST 151 (274)
T ss_pred HHHHHhCCcccCCCCHHHEEECCC--CCEEEcccccceeeccc
Confidence 677899999999999999999865 89999999999887653
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.1e-10 Score=122.73 Aligned_cols=143 Identities=14% Similarity=0.111 Sum_probs=93.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|+.+ +|+.||+|+.......... . + ....+.+|+
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~--~------------------------~------~~~~~~~ei 55 (264)
T cd06653 8 KLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQET--S------------------------K------EVNALECEI 55 (264)
T ss_pred eeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchh--h------------------------H------HHHHHHHHH
Confidence 68999999999999975 7999999986432211000 0 0 001244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++++ +. +.+..... ....+++|||++|.+|.+..... ...+...+...+.++.
T Consensus 56 ~~l~~l~h------------------~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~ 116 (264)
T cd06653 56 QLLKNLRH------------------DRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAY-GALTENVTRRYTRQIL 116 (264)
T ss_pred HHHHHcCC------------------CCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHc-CCCCHHHHHHHHHHHH
Confidence 65555532 11 11222222 23467999999999998765321 2234444433333332
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 117 ~al~~LH~~~i~H~dl~p~ni~i~~~--~~~~l~dfg~~~~~~ 157 (264)
T cd06653 117 QGVSYLHSNMIVHRDIKGANILRDSA--GNVKLGDFGASKRIQ 157 (264)
T ss_pred HHHHHHHhCCEecCCCCHHHEEEcCC--CCEEECccccccccc
Confidence 678899999999999999999864 889999999988653
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.8e-10 Score=131.99 Aligned_cols=77 Identities=18% Similarity=0.237 Sum_probs=54.7
Q ss_pred CCceEEEeecCCcCCCChHHHhhc-----------------------CCCHHHHHHHHHHH--HHHHHHhcCeeccCCCC
Q 002927 127 SETVLILEFMDGIRLNDCESLEAF-----------------------GVNKQKVVEEITRA--YAHQIYVDGFFNGDPHP 181 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~~-----------------------~~~~~~l~~~~~~~--~l~~i~~~G~~H~D~hP 181 (864)
...+|||||+++.+|.++...... ..+...+...+.++ .+..+|..|++|||+||
T Consensus 258 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp 337 (507)
T PLN03224 258 GSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKP 337 (507)
T ss_pred CceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCch
Confidence 457899999999999887542110 01111222222222 27788999999999999
Q ss_pred CCeEEccCCCCceEEEeccccccc
Q 002927 182 GNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 182 gNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+|||++.+ +.++|+|||++..+
T Consensus 338 ~NILl~~~--~~~kL~DFGla~~~ 359 (507)
T PLN03224 338 ENLLVTVD--GQVKIIDFGAAVDM 359 (507)
T ss_pred HhEEECCC--CcEEEEeCcCcccc
Confidence 99999865 89999999998654
|
|
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.13 E-value=2e-10 Score=122.12 Aligned_cols=140 Identities=19% Similarity=0.204 Sum_probs=92.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|... +|+.||+|+......... + .+ .+..|.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~--~---------------------------~~------~~~~e~ 50 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEK--E---------------------------KQ------QLVSEV 50 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHH--H---------------------------HH------HHHHHH
Confidence 67999999999999965 789999998653211100 0 00 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe------cCCceEEEeecCCcCCCChHHHh---hcCCCHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEE 160 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l~~~ 160 (864)
..+.++++ + .+.+++. ....+++|||++|.+|.++.... ....+...+...
T Consensus 51 ~~l~~l~~------------------~--~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~ 110 (265)
T cd08217 51 NILRELKH------------------P--NIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRI 110 (265)
T ss_pred HHHHhcCC------------------C--ccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHH
Confidence 44444322 1 1222221 23357999999999998875432 123444555554
Q ss_pred HHHHH--HHHHH-----hcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 161 ITRAY--AHQIY-----VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 161 ~~~~~--l~~i~-----~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+.+++ +..+| ..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 111 ~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~--~~~kl~d~g~~~~~~~ 162 (265)
T cd08217 111 LTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDAN--NNVKLGDFGLAKILGH 162 (265)
T ss_pred HHHHHHHHHHHhcCccccCcceecCCCHHHEEEecC--CCEEEecccccccccC
Confidence 44443 67889 8899999999999999865 8999999999887754
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.1e-10 Score=140.91 Aligned_cols=141 Identities=19% Similarity=0.193 Sum_probs=93.3
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+-+|.||+|+||+|+..+|+.|||||++|-..-.+-.=.+++.+| . ..+..
T Consensus 704 ~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RL----------------------------k-~~~~~ 754 (974)
T KOG1166|consen 704 KEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERL----------------------------K-PQMLP 754 (974)
T ss_pred eeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhh----------------------------c-hhhhc
Confidence 569999999999999888999999999987653332222221111 1 01111
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQ 168 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~ 168 (864)
.+..+...+. ..+..+||+||.+=++|-|+.. .....+..-++-..++++ +++
T Consensus 755 ~~~~~~~a~~------------------------~~~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~ 809 (974)
T KOG1166|consen 755 SIMHISSAHV------------------------FQNASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEH 809 (974)
T ss_pred chHHHHHHHc------------------------cCCcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHH
Confidence 1111211110 1456689999999999998865 223344444444444444 899
Q ss_pred HHhcCeeccCCCCCCeEEccCC-----CCceEEEeccccccc
Q 002927 169 IYVDGFFNGDPHPGNFLVSKDP-----PHRPILLDFGLTKKL 205 (864)
Q Consensus 169 i~~~G~~H~D~hPgNIlv~~~~-----~g~i~LiDFG~~~~l 205 (864)
+|..||||+||||.|+|++... ..-|+|||||.+-.+
T Consensus 810 lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm 851 (974)
T KOG1166|consen 810 LHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM 851 (974)
T ss_pred HHhcceecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence 9999999999999999997431 235899999986544
|
|
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.5e-10 Score=123.78 Aligned_cols=139 Identities=18% Similarity=0.194 Sum_probs=91.7
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||.|++|+||+|+.+ ++..||||+.+.+...... -+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~------------------------------------~~ 54 (288)
T cd05050 11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ------------------------------------AD 54 (288)
T ss_pred ccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHH------------------------------------HH
Confidence 67999999999999863 4789999987654321111 01
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-------------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA------------- 149 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~------------- 149 (864)
+.+|+..+.++.+ +. +.+..... ....+++|||++|.+|.++.....
T Consensus 55 ~~~ei~~l~~l~h------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 116 (288)
T cd05050 55 FQREAALMAEFDH------------------PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSS 116 (288)
T ss_pred HHHHHHHHHhcCC------------------CchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccc
Confidence 3345544444322 11 12222222 345789999999999987754211
Q ss_pred --------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 150 --------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 150 --------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
.......+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+
T Consensus 117 ~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~ 180 (288)
T cd05050 117 ARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGEN--MVVKIADFGLSRNI 180 (288)
T ss_pred cccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCC--CceEECccccceec
Confidence 1123333444444433 678899999999999999999865 89999999987654
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.13 E-value=9.1e-11 Score=141.80 Aligned_cols=138 Identities=20% Similarity=0.233 Sum_probs=108.1
Q ss_pred cccccccceeeEEEEec--CCC----EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV--DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~--~G~----~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||.|.||.||+|+.. +|. .||||.+++.... .++.|
T Consensus 698 ~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~------------------------------------~~~~~ 741 (1025)
T KOG1095|consen 698 RVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSE------------------------------------QEVSD 741 (1025)
T ss_pred eeeccccccceEEEEEecCCCCccceEEEEEeccccCCH------------------------------------HHHHH
Confidence 78999999999999976 454 3888876654332 24567
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE----ecCCceEEEeecCCcCCCChHHHh------hcCCCH
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI----QSSETVLILEFMDGIRLNDCESLE------AFGVNK 154 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~----~~~~~vLvmE~i~G~~L~~~~~~~------~~~~~~ 154 (864)
|.+||..+..|.| ++| -+.+ .....+|++||++|++|..+++.. ...+..
T Consensus 742 Fl~Ea~~m~~f~H------------------pNi--v~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~ 801 (1025)
T KOG1095|consen 742 FLKEALLMSKFDH------------------PNI--VSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSM 801 (1025)
T ss_pred HHHHHHHHhcCCC------------------cce--eeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCH
Confidence 9999999998854 222 2222 167789999999999999987654 445667
Q ss_pred HHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 155 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 155 ~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+++...+++. ++++.+.+||||||-..|.|++.. ..+++.||||++.+.
T Consensus 802 ~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~--r~VKIaDFGlArDiy 853 (1025)
T KOG1095|consen 802 RDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDER--RVVKIADFGLARDIY 853 (1025)
T ss_pred HHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeeccc--CcEEEcccchhHhhh
Confidence 78888877776 888999999999999999999975 789999999998543
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.7e-10 Score=127.86 Aligned_cols=140 Identities=15% Similarity=0.283 Sum_probs=95.8
Q ss_pred ccccccccceeeEEEEecC--CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 10 ETPLATASIAQVHRATLVD--GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~--G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
.+.||+|+||+||.+...+ .+.+|+|+........- . .+..
T Consensus 23 ~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~------------------------------------~-~l~~ 65 (322)
T KOG1164|consen 23 GKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP------------------------------------S-VLKI 65 (322)
T ss_pred eeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC------------------------------------c-cchh
Confidence 3689999999999999764 35899998654221100 0 0122
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEec-----CCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHH
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-----SETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEI 161 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-----~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~ 161 (864)
|...+..+... ....++|.++.. .-+++||+.+ |.+|.++..... ..+.....+...
T Consensus 66 E~~vl~~l~~~----------------~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia 128 (322)
T KOG1164|consen 66 EIQVLKKLEKK----------------NGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIA 128 (322)
T ss_pred HHHHHHHHhhh----------------cCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHH
Confidence 33333333220 112456777652 2468999987 899998764333 456677777777
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCC-C--CceEEEeccccc
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-P--HRPILLDFGLTK 203 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~--g~i~LiDFG~~~ 203 (864)
++.+ ++.+|+.||+|||+||+|+++.... . ..+.|+|||+++
T Consensus 129 ~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar 175 (322)
T KOG1164|consen 129 IQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR 175 (322)
T ss_pred HHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence 7766 9999999999999999999998542 1 468999999998
|
|
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.7e-10 Score=124.49 Aligned_cols=143 Identities=16% Similarity=0.204 Sum_probs=94.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|+||+|+.. +|+.||||+.+...... + ...++.+|+
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~-----------------------------~------~~~~~~~e~ 49 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKE-----------------------------G------FPITAIREI 49 (287)
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecccccc-----------------------------c------chHHHHHHH
Confidence 56899999999999976 68999999877543100 0 001233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-c--CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
..+.++.+. .-+.+..++. . ...+|||||+++ +|.++........+...+...+.+++
T Consensus 50 ~~l~~l~~~-----------------~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~ 111 (287)
T cd07840 50 KLLQKLRHP-----------------NIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLE 111 (287)
T ss_pred HHHHhccCC-----------------CeeeheeeEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 555554321 0112222222 3 568899999986 66555332222455555555444443
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+|++|.||+++++ +.++|+|||++..+...
T Consensus 112 al~~LH~~~~~h~dl~p~nil~~~~--~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 112 GLQYLHSNGILHRDIKGSNILINND--GVLKLADFGLARPYTKR 153 (287)
T ss_pred HHHHHHHCCceeccCcHHHeEEcCC--CCEEEccccceeeccCC
Confidence 778899999999999999999965 89999999998877554
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.8e-10 Score=121.38 Aligned_cols=80 Identities=14% Similarity=0.217 Sum_probs=59.3
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
.+..+++|||+.|.+|.++............+...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 69 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~--~~~kl~dfg~~~ 146 (262)
T cd05058 69 EGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDES--FTVKVADFGLAR 146 (262)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCC--CcEEECCccccc
Confidence 3457899999999999887543222234444444333333 678899999999999999999865 889999999987
Q ss_pred ccCh
Q 002927 204 KLSS 207 (864)
Q Consensus 204 ~l~~ 207 (864)
.+..
T Consensus 147 ~~~~ 150 (262)
T cd05058 147 DIYD 150 (262)
T ss_pred cccC
Confidence 6543
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.2e-10 Score=127.08 Aligned_cols=142 Identities=18% Similarity=0.171 Sum_probs=91.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|+||+|+.+ +|+.||||+.+......- .+.++.+|.
T Consensus 13 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~-----------------------------------~~~~~~~e~ 57 (302)
T cd07864 13 GQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEG-----------------------------------FPITAIREI 57 (302)
T ss_pred eeecccCCEEEEEEEECCCCcEEEEEEEeecccccC-----------------------------------chHHHHHHH
Confidence 68999999999999986 799999998764321100 011233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-----------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 158 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~ 158 (864)
+.+.++++.. -+.+..++. ....+|+|||++| .+.+.........+...+.
T Consensus 58 ~~~~~l~h~~-----------------i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~ 119 (302)
T cd07864 58 KILRQLNHRN-----------------IVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIK 119 (302)
T ss_pred HHHHhCCCCC-----------------eeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHH
Confidence 4444443210 011111111 1256899999997 4433322122235555555
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||.+..+..
T Consensus 120 ~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~--~~~kl~dfg~~~~~~~ 168 (302)
T cd07864 120 SFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNK--GQIKLADFGLARLYNS 168 (302)
T ss_pred HHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC--CcEEeCcccccccccC
Confidence 5555544 788999999999999999999865 8999999999887654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.4e-10 Score=128.97 Aligned_cols=152 Identities=13% Similarity=0.122 Sum_probs=95.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+........... .........+.++.+|.
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~E~ 71 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKD-----------------------RQLVGMCGIHFTTLREL 71 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccc-----------------------hhhhcccccchhHHHHH
Confidence 57999999999999976 7999999987542211100000 00000001122345566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.+. .-+.+...+. ....+++|||++| +|.+... .........+...+.+++ +
T Consensus 72 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~-~~~~~~~~~~~~~~~ql~~aL 132 (335)
T PTZ00024 72 KIMNEIKHE-----------------NIMGLVDVYVEGDFINLVMDIMAS-DLKKVVD-RKIRLTESQVKCILLQILNGL 132 (335)
T ss_pred HHHHhCCCc-----------------ceeeeeEEEecCCcEEEEEecccc-CHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 655555321 0122222222 4567899999986 5655532 222345555555444444 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 133 ~~LH~~~i~H~dl~~~nill~~~--~~~kl~dfg~~~~~~ 170 (335)
T PTZ00024 133 NVLHKWYFMHRDLSPANIFINSK--GICKIADFGLARRYG 170 (335)
T ss_pred HHHHhCCeecccccHHHeEECCC--CCEEECCccceeecc
Confidence 88999999999999999999865 899999999987654
|
|
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.6e-10 Score=125.28 Aligned_cols=140 Identities=14% Similarity=0.136 Sum_probs=92.0
Q ss_pred cccccc--cceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 11 TPLATA--SIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 11 ~plasa--SigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
+-||.| +++.||+++.+ +|+.||||+.+...... +..+. +.+
T Consensus 4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------~~~~~------~~~ 48 (327)
T cd08227 4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTN-----------------------------EMVTF------LQG 48 (327)
T ss_pred hhccccccceEEEEEEeecccCcEEEEEEechhhccH-----------------------------HHHHH------HHH
Confidence 347888 88999999976 89999999765322100 00011 223
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHH
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRA 164 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~ 164 (864)
|.+.++.+. ++++ .+-..+. ....++||||++|.+|.++.... ..+++...+...+.++
T Consensus 49 e~~~l~~l~------------------hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi 110 (327)
T cd08227 49 ELHVSKLFN------------------HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGV 110 (327)
T ss_pred HHHHHHhcC------------------CCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHH
Confidence 444333332 2222 1222222 56688999999999998876432 2235555555555544
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+ +..+|..|++|+|+||.||+++.+ +++++.|||....+
T Consensus 111 ~~~L~~LH~~~iiH~dlkp~Nil~~~~--~~~~l~~~~~~~~~ 151 (327)
T cd08227 111 LKALDYIHHMGYVHRSVKASHILISVD--GKVYLSGLRSNLSM 151 (327)
T ss_pred HHHHHHHHHCCEecCCCChhhEEEecC--CcEEEcccchhhcc
Confidence 4 788999999999999999999865 88999999865443
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.6e-10 Score=121.39 Aligned_cols=77 Identities=14% Similarity=0.172 Sum_probs=55.3
Q ss_pred cCCceEEEeecCCcCCCChHHHhhc---CCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAF---GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFG 200 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~---~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG 200 (864)
....+|||||++|.+|.++...... ......+...+.++. +..+|+.|++|+|+||.|||++.+ +.++|+|||
T Consensus 67 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~--~~~~l~Dfg 144 (268)
T cd05086 67 AIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSD--LTVKVGDYG 144 (268)
T ss_pred CCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCC--ccEEecccc
Confidence 3457899999999999887543211 112222223233322 678899999999999999999865 889999999
Q ss_pred cccc
Q 002927 201 LTKK 204 (864)
Q Consensus 201 ~~~~ 204 (864)
++..
T Consensus 145 ~~~~ 148 (268)
T cd05086 145 IGPS 148 (268)
T ss_pred cccc
Confidence 8754
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.6e-10 Score=122.68 Aligned_cols=138 Identities=17% Similarity=0.209 Sum_probs=93.3
Q ss_pred cccccccceeeEEEEecC------CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLVD------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||.|++|.||+|..++ +..||||+...+.... ....
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~------------------------------------~~~~ 55 (277)
T cd05032 12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMR------------------------------------ERIE 55 (277)
T ss_pred eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHH------------------------------------HHHH
Confidence 679999999999999752 4789999865432110 0112
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhc---------C
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF---------G 151 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~---------~ 151 (864)
+.+|+..+.++.+ + .+.+++. ....+++|||++|.+|.++...... .
T Consensus 56 ~~~e~~~l~~~~~------------------~--~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 115 (277)
T cd05032 56 FLNEASVMKEFNC------------------H--HVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGP 115 (277)
T ss_pred HHHHHHHHHhCCC------------------C--ceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCC
Confidence 4445555544322 1 2233432 5668999999999999887542111 1
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 152 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 152 ~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.....+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||+++.+.
T Consensus 116 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~--~~~kl~dfg~~~~~~ 170 (277)
T cd05032 116 PTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAED--LTVKIGDFGMTRDIY 170 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCC--CCEEECCcccchhhc
Confidence 23344444444443 778999999999999999999865 899999999987653
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.2e-10 Score=122.16 Aligned_cols=137 Identities=22% Similarity=0.230 Sum_probs=93.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|... +|+.|+||+.+-..... .+ .+.+|+
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~-------------------------------~~------~~~~e~ 67 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQR-------------------------------RE------LLFNEV 67 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhH-------------------------------HH------HHHHHH
Confidence 68999999999999965 79999999753111100 00 022344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+.++.+ +. +.+...+. ....+++|||++|.+|.+.... ...+...+...+.+++
T Consensus 68 ~~l~~~~h------------------~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~ 127 (285)
T cd06648 68 VIMRDYQH------------------PNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKA 127 (285)
T ss_pred HHHHHcCC------------------CChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHH
Confidence 43333321 11 22222222 5667899999999999887542 3455555555555444
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 128 l~~lH~~~i~H~dl~p~Nil~~~~--~~~~l~d~g~~~~~~ 166 (285)
T cd06648 128 LSFLHAQGVIHRDIKSDSILLTSD--GRVKLSDFGFCAQVS 166 (285)
T ss_pred HHHHHhCCeecCCCChhhEEEcCC--CcEEEcccccchhhc
Confidence 788999999999999999999865 899999999876554
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.7e-10 Score=130.47 Aligned_cols=140 Identities=19% Similarity=0.210 Sum_probs=101.7
Q ss_pred cccccccceeeEEEEec--CC---CEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV--DG---RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~--~G---~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+-||+|.||.||+|+++ ++ ..||||..+-.-. .. . ..-.+|
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~--~~--------------------------~------~~~~e~ 208 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSE--LT--------------------------K------EQIKEF 208 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeeccccc--cc--------------------------H------HHHHHH
Confidence 67999999999999986 33 2389996542000 00 0 011247
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 161 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~ 161 (864)
.+||+-++.+.| ..|-++|. ....+||||+|.|++|.+.+.-....++..+..+.+
T Consensus 209 m~EArvMr~l~H--------------------~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~ 268 (474)
T KOG0194|consen 209 MKEARVMRQLNH--------------------PNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFC 268 (474)
T ss_pred HHHHHHHHhCCC--------------------CCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHH
Confidence 789998887643 23445553 567899999999999999865443336666666666
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.++. +++||..+++|||+-..|+|+..+ +.+++.||||+..-+
T Consensus 269 ~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~--~~vKISDFGLs~~~~ 313 (474)
T KOG0194|consen 269 YDAARGLEYLHSKNCIHRDIAARNCLYSKK--GVVKISDFGLSRAGS 313 (474)
T ss_pred HHHHhHHHHHHHCCCcchhHhHHHheecCC--CeEEeCccccccCCc
Confidence 6655 888999999999999999999864 567999999977654
|
|
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.5e-10 Score=119.63 Aligned_cols=142 Identities=17% Similarity=0.207 Sum_probs=96.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|... +|+.||||+........ +... .+..|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~~~~------~~~~e~ 50 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSE-----------------------------KERE------DALNEV 50 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCCh-----------------------------HHHH------HHHHHH
Confidence 67999999999999976 79999999865322110 0000 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhh---cCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~---~~~~~~~l~~~~~~~ 164 (864)
+.+.++++ +. +.+...+. ....+|+|||++|.+|.+...... ..++...+...+.++
T Consensus 51 ~~l~~l~~------------------~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i 112 (258)
T cd08215 51 KILKKLNH------------------PNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQL 112 (258)
T ss_pred HHHHhcCC------------------CChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHH
Confidence 44444321 11 11122222 466789999999999988754332 445666666666555
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+|..|++|+|++|.||+++.+ +.++|+|||++.....
T Consensus 113 ~~~l~~lh~~~~~H~dl~~~nil~~~~--~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 113 CLALKYLHSRKILHRDIKPQNIFLTSN--GLVKLGDFGISKVLSS 155 (258)
T ss_pred HHHHHHHHhCCEecccCChHHeEEcCC--CcEEECCccceeeccc
Confidence 4 788999999999999999999865 8999999999877654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.11 E-value=8.1e-11 Score=131.01 Aligned_cols=139 Identities=20% Similarity=0.219 Sum_probs=103.7
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|-||.||.+....+..||||..||+..+..+. ||..|++
T Consensus 544 ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~------------------------------------~F~kEIk 587 (807)
T KOG1094|consen 544 EKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARN------------------------------------DFLKEIK 587 (807)
T ss_pred hhhcCcccceeEEEEecCceEEEEeecCcccchhHHH------------------------------------HHHHHHH
Confidence 6799999999999998777999999999987654322 3677888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcC-CCHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITRAY 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~-~~~~~l~~~~~~~~ 165 (864)
.+.++++ | .|-+++. ....+++|||++.+.|.++....... .+.....+.+.+++
T Consensus 588 iLsqLkh------------------P--NIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqia 647 (807)
T KOG1094|consen 588 ILSRLKH------------------P--NIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIA 647 (807)
T ss_pred HHhccCC------------------C--CeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHH
Confidence 8887633 2 2233332 34578999999999999886433222 23444555555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++.+-..+|+|||+-+.|+||+.+ +.+++.||||++.+-.
T Consensus 648 sgmaYLes~nfVHrd~a~rNcLv~~e--~~iKiadfgmsR~lys 689 (807)
T KOG1094|consen 648 SGMAYLESLNFVHRDLATRNCLVDGE--FTIKIADFGMSRNLYS 689 (807)
T ss_pred HHHHHHHhhchhhccccccceeecCc--ccEEecCccccccccc
Confidence 667778999999999999999965 9999999999986643
|
|
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.4e-10 Score=121.28 Aligned_cols=144 Identities=15% Similarity=0.112 Sum_probs=94.1
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+.|++|++|.||+|... +|+.|++|+.+......... +. -..+.+|
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~--------------------------~~------~~~~~~e 54 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETS--------------------------KE------VSALECE 54 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhH--------------------------HH------HHHHHHH
Confidence 378999999999999975 79999999865432111000 00 0014456
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
+..+.++++ +. +.+...+. ....+++|||++|.+|.+..... ...+.......+.++
T Consensus 55 ~~~l~~l~h------------------~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi 115 (266)
T cd06651 55 IQLLKNLQH------------------ERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAY-GALTESVTRKYTRQI 115 (266)
T ss_pred HHHHHHcCC------------------CCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHH
Confidence 655555532 12 12222222 13457899999999998775422 224444444433333
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+ +..+|..|++|+|++|.||+++.+ ++++|+|||++..+.
T Consensus 116 ~~~l~~LH~~~i~H~~l~p~nil~~~~--~~~~l~dfg~~~~~~ 157 (266)
T cd06651 116 LEGMSYLHSNMIVHRDIKGANILRDSA--GNVKLGDFGASKRLQ 157 (266)
T ss_pred HHHHHHHHhCCeeeCCCCHHHEEECCC--CCEEEccCCCccccc
Confidence 3 678899999999999999999854 889999999987653
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.6e-10 Score=120.46 Aligned_cols=79 Identities=28% Similarity=0.291 Sum_probs=60.7
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+++|||++|.+|.+..... ...+...+...+.+++ +..+|..|++|+|++|.||+++.+ ++++|+|||++.
T Consensus 65 ~~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~--~~~~l~d~~~~~ 141 (250)
T cd05123 65 EEKLYLVLEYAPGGELFSHLSKE-GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDAD--GHIKLTDFGLAK 141 (250)
T ss_pred CCeeEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCC--CcEEEeecCcce
Confidence 34568999999999998775422 2355555555554444 778899999999999999999865 899999999987
Q ss_pred ccCh
Q 002927 204 KLSS 207 (864)
Q Consensus 204 ~l~~ 207 (864)
....
T Consensus 142 ~~~~ 145 (250)
T cd05123 142 ELSS 145 (250)
T ss_pred eccc
Confidence 6644
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.9e-10 Score=122.50 Aligned_cols=138 Identities=17% Similarity=0.149 Sum_probs=91.7
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||.|++|.||+|+.. .+..|++|+.+......- .-+
T Consensus 6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~------------------------------------~~~ 49 (290)
T cd05045 6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSE------------------------------------LRD 49 (290)
T ss_pred ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHH------------------------------------HHH
Confidence 56999999999999863 236799998765432110 011
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh-----------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA----------- 149 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~----------- 149 (864)
+.+|...+.++.+ + .+.+++. ....+++|||++|.+|.++.....
T Consensus 50 ~~~E~~~l~~l~h------------------~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 109 (290)
T cd05045 50 LLSEFNLLKQVNH------------------P--HVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDG 109 (290)
T ss_pred HHHHHHHHhhCCC------------------C--CEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCcccccccccc
Confidence 3445444444322 2 2223332 566899999999999987743211
Q ss_pred ------------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 150 ------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 150 ------------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..++...+...+.+++ +..+|..|++|+|+||.||+++++ +.++|+|||++..+.
T Consensus 110 ~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~--~~~kl~dfg~~~~~~ 178 (290)
T cd05045 110 NRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEG--RKMKISDFGLSRDVY 178 (290)
T ss_pred ccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCC--CcEEecccccccccc
Confidence 1123344444444443 788999999999999999999865 899999999987653
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.7e-10 Score=121.41 Aligned_cols=79 Identities=22% Similarity=0.278 Sum_probs=62.7
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCC-ceEEEecccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPH-RPILLDFGLT 202 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g-~i~LiDFG~~ 202 (864)
....++||||++|.+|.++.... ..++...+...+.+++ +..+|+.|++|+|++|.||+++.+ + +++|+|||++
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~--~~~~~l~dfg~~ 157 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKE-GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRA--KDRIYLCDYGLC 157 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCC--CCeEEEecCccc
Confidence 45689999999999998875432 2456666666555554 788999999999999999999865 5 8999999998
Q ss_pred cccCh
Q 002927 203 KKLSS 207 (864)
Q Consensus 203 ~~l~~ 207 (864)
..+..
T Consensus 158 ~~~~~ 162 (267)
T PHA03390 158 KIIGT 162 (267)
T ss_pred eecCC
Confidence 76653
|
|
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.5e-10 Score=125.22 Aligned_cols=141 Identities=17% Similarity=0.182 Sum_probs=91.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++|++|++|+||+|+.+ +|+.||||+.+...... + .+-.+.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~------~~~~~~~E~ 50 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-----------------------------G------VPSTAIREI 50 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEcccccccc-----------------------------c------cchHHHHHH
Confidence 67999999999999976 79999999765321100 0 001234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++++.. -+.+...+. ....++||||+.+ +|.++.... ...++...+...+.+++
T Consensus 51 ~~l~~l~h~~-----------------i~~~~~~~~~~~~~~~v~e~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~i~~~ 112 (284)
T cd07860 51 SLLKELNHPN-----------------IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQG 112 (284)
T ss_pred HHHHhcCCCC-----------------CcchhhhcccCCcEEEEeecccc-CHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 5555543210 111111112 4567899999975 555543221 12345555555554444
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 113 l~~lh~~~i~H~~l~p~nill~~~--~~~~l~dfg~~~~~~ 151 (284)
T cd07860 113 LAFCHSHRVLHRDLKPQNLLINTE--GAIKLADFGLARAFG 151 (284)
T ss_pred HHHHHHCCeecCCCCHHHEEECCC--CCEEEeeccchhhcc
Confidence 788999999999999999999865 899999999876553
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.2e-10 Score=120.29 Aligned_cols=143 Identities=17% Similarity=0.185 Sum_probs=95.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCCh-HHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGI-KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i-~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+.||.|++|.||+|... +++.||||+..... .... . -.+.+|
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------~------~~~~~e 49 (256)
T cd08220 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDE------------------------------R------LAAQNE 49 (256)
T ss_pred EEecccCceEEEEEEEcCCCcEEEEEEEeccccccHH------------------------------H------HHHHHH
Confidence 67999999999999975 78999999865321 1000 0 013345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH-
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY- 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~- 165 (864)
++.++++++. .-+.+..... ....++||||++|.+|.++..... ...+...+...+.+++
T Consensus 50 ~~~l~~~~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~ 112 (256)
T cd08220 50 CQVLKLLSHP-----------------NIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILL 112 (256)
T ss_pred HHHHhhCCCC-----------------chhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 5555544221 0111112222 455789999999999988764322 2245555555444443
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|+||+++.+ ++.++|+|||++..+..
T Consensus 113 ~l~~lh~~~i~h~dl~~~nil~~~~-~~~~~l~d~~~~~~~~~ 154 (256)
T cd08220 113 ALHHVHTKLILHRDLKTQNILLDKH-KMVVKIGDFGISKILSS 154 (256)
T ss_pred HHHHHHhCCeecCCCCHHHEEEcCC-CCEEEEccCCCceecCC
Confidence 678899999999999999999854 35689999999987754
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.3e-10 Score=125.23 Aligned_cols=142 Identities=17% Similarity=0.174 Sum_probs=91.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|+||+|+.. +|+.||||+........ + ....+.+|.
T Consensus 18 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~---~--------------------------------~~~~~~~e~ 62 (310)
T cd07865 18 AKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE---G--------------------------------FPITALREI 62 (310)
T ss_pred EEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC---C--------------------------------chhHHHHHH
Confidence 67999999999999976 79999999764221100 0 001123355
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 160 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 160 (864)
+.+.++.+. .-+.+..+.. ....++||||+.+ ++.+........+....+...
T Consensus 63 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i 124 (310)
T cd07865 63 KILQLLKHE-----------------NVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKV 124 (310)
T ss_pred HHHHhCCCC-----------------CccceEEEEecccccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHH
Confidence 555554321 0122222221 2345899999976 444443222224555665555
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 125 ~~qi~~al~~lH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~~~~ 171 (310)
T cd07865 125 MKMLLNGLYYIHRNKILHRDMKAANILITKD--GILKLADFGLARAFSL 171 (310)
T ss_pred HHHHHHHHHHHHHCCeeccCCCHHHEEECCC--CcEEECcCCCcccccC
Confidence 55544 788999999999999999999865 8999999999886644
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.4e-10 Score=123.18 Aligned_cols=138 Identities=14% Similarity=0.156 Sum_probs=87.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|+.+ +|+.||||+.+...... + ..-.+.+|+
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-----------------------------~------~~~~~~~e~ 52 (294)
T PLN00009 8 EKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDE-----------------------------G------VPSTAIREI 52 (294)
T ss_pred EEecCCCCEEEEEEEecCCCcEEEEEehhhccccc-----------------------------c------chHHHHHHH
Confidence 67999999999999976 79999999754211000 0 001133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~ 164 (864)
+.+.++.+ + .+++++. ....++||||+++ ++.+...... ...+...+...+.++
T Consensus 53 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi 111 (294)
T PLN00009 53 SLLKEMQH------------------G--NIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQI 111 (294)
T ss_pred HHHHhccC------------------C--CEeeEEEEEecCCeEEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHH
Confidence 55555432 1 2333332 4668899999975 5544432111 112333333333332
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+ +..+|..|++|+|++|.||+++.+ ++.++|+|||++..+
T Consensus 112 ~~aL~~LH~~~i~H~dl~p~nill~~~-~~~~kl~dfg~~~~~ 153 (294)
T PLN00009 112 LRGIAYCHSHRVLHRDLKPQNLLIDRR-TNALKLADFGLARAF 153 (294)
T ss_pred HHHHHHHHhCCeeCCCCCcceEEEECC-CCEEEEccccccccc
Confidence 2 788999999999999999999854 367999999998754
|
|
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.9e-10 Score=124.57 Aligned_cols=79 Identities=15% Similarity=0.197 Sum_probs=58.4
Q ss_pred cCCceEEEeecCCcCCCChHHHhh---------------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEcc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 188 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 188 (864)
....+++|||++|.+|.++..... .......+...+.+++ +..+|..|++|+|++|.||+++.
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~ 169 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTE 169 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC
Confidence 455789999999999988754221 1123333334333333 67889999999999999999986
Q ss_pred CCCCceEEEecccccccC
Q 002927 189 DPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 189 ~~~g~i~LiDFG~~~~l~ 206 (864)
+ +.++|+|||+++.+.
T Consensus 170 ~--~~~kL~Dfg~~~~~~ 185 (334)
T cd05100 170 D--NVMKIADFGLARDVH 185 (334)
T ss_pred C--CcEEECCcccceecc
Confidence 5 899999999987654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.5e-10 Score=120.40 Aligned_cols=78 Identities=17% Similarity=0.189 Sum_probs=60.0
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+|+|||++|.+|.+.... ........+...+.+++ +..+|+.|++|+|+||.||+++.+ +.++++|||...
T Consensus 57 ~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~~l~df~~~~ 133 (237)
T cd05576 57 EDSVFLVLQHAEGGKLWSHISK-FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDR--GHIQLTYFSRWS 133 (237)
T ss_pred CCeEEEEEecCCCCCHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCC--CCEEEecccchh
Confidence 3456899999999999876532 23455555555554444 788899999999999999999865 889999999876
Q ss_pred ccC
Q 002927 204 KLS 206 (864)
Q Consensus 204 ~l~ 206 (864)
.+.
T Consensus 134 ~~~ 136 (237)
T cd05576 134 EVE 136 (237)
T ss_pred ccc
Confidence 543
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.10 E-value=5e-10 Score=120.44 Aligned_cols=137 Identities=19% Similarity=0.179 Sum_probs=93.3
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+-||.|++|.||+|+.+ +.+.|++|+....-.+.. . -+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~--------------------------~----------~~ 54 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENL--------------------------Q----------SE 54 (275)
T ss_pred eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHH--------------------------H----------HH
Confidence 55999999999999964 346799997543211100 0 01
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhc--------CC
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF--------GV 152 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~--------~~ 152 (864)
+.+|++.++++.+ ..+.+++. ....++||||++|.+|.++...... .+
T Consensus 55 ~~~E~~~l~~l~h--------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l 114 (275)
T cd05046 55 FRRELDMFRKLSH--------------------KNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPL 114 (275)
T ss_pred HHHHHHHHHhcCC--------------------cceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCC
Confidence 4456666666532 12233332 3567899999999999887643221 24
Q ss_pred CHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 153 NKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 153 ~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
....+...+.+++ +..+|..|++|+|++|.||+++.+ +.+++.|||++...
T Consensus 115 ~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~--~~~~l~~~~~~~~~ 167 (275)
T cd05046 115 STKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQ--REVKVSLLSLSKDV 167 (275)
T ss_pred CHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCC--CcEEEccccccccc
Confidence 4455554444443 788999999999999999999865 88999999987644
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.4e-10 Score=123.43 Aligned_cols=143 Identities=17% Similarity=0.146 Sum_probs=93.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|+||+|+.. +|+.||||..+..-... .. ..-++..|.
T Consensus 21 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~------------------------~~----------~~~~~~~e~ 66 (308)
T cd06634 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS------------------------NE----------KWQDIIKEV 66 (308)
T ss_pred HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccC------------------------hH----------HHHHHHHHH
Confidence 67999999999999976 78999999765321100 00 001133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+..+.+. ..+.+...+. ....+|||||+.| ++.+.........+...+...+.+++ +
T Consensus 67 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~~l~~~l 128 (308)
T cd06634 67 RFLQKLRHP-----------------NTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGL 128 (308)
T ss_pred HHHHhCCCC-----------------CcccEEEEEEcCCeeEEEEEccCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence 555554321 0122222222 5667899999986 56555433333455555555554443 7
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 129 ~~LH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 129 AYLHSHNMIHRDVKAGNILLSEP--GLVKLGDFGSASIMAP 167 (308)
T ss_pred HHHHhCCcccCCCCHHhEEECCC--CcEEECCcccceeecC
Confidence 88899999999999999999865 8999999999876543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.1e-10 Score=122.32 Aligned_cols=81 Identities=16% Similarity=0.149 Sum_probs=59.1
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCC------CceEEE
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP------HRPILL 197 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~------g~i~Li 197 (864)
....++||||++|.+|.++........+...+...+.+++ +..+|+.|++|+|+||.||+++.++. +.++++
T Consensus 71 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~ 150 (258)
T cd05078 71 GDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLS 150 (258)
T ss_pred CCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEec
Confidence 4678899999999999887543333345554444444433 77889999999999999999986521 137899
Q ss_pred ecccccccC
Q 002927 198 DFGLTKKLS 206 (864)
Q Consensus 198 DFG~~~~l~ 206 (864)
|||.+....
T Consensus 151 d~g~~~~~~ 159 (258)
T cd05078 151 DPGISITVL 159 (258)
T ss_pred ccccccccC
Confidence 999876543
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.8e-10 Score=136.98 Aligned_cols=143 Identities=14% Similarity=0.072 Sum_probs=93.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCCh-HHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGI-KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i-~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+.||.|+||.||+|+.+ +++.||+|+..... .... . -.|..|
T Consensus 19 ~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~------------------------------~------~~~~~E 62 (1021)
T PTZ00266 19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKERE------------------------------K------SQLVIE 62 (1021)
T ss_pred EEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHH------------------------------H------HHHHHH
Confidence 67999999999999976 78899999875321 1100 0 013345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHh---hcCCCHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEIT 162 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l~~~~~ 162 (864)
+..+.++.+. ..+.+...+. ....+|||||++|.+|.+++... ...++...+...+.
T Consensus 63 I~IL~~L~HP-----------------NIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~ 125 (1021)
T PTZ00266 63 VNVMRELKHK-----------------NIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITR 125 (1021)
T ss_pred HHHHHHcCCC-----------------CcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHH
Confidence 5555554321 1122223322 23467999999999998875421 12355566555555
Q ss_pred HHH--HHHHHhc-------CeeccCCCCCCeEEccC---------------CCCceEEEecccccccC
Q 002927 163 RAY--AHQIYVD-------GFFNGDPHPGNFLVSKD---------------PPHRPILLDFGLTKKLS 206 (864)
Q Consensus 163 ~~~--l~~i~~~-------G~~H~D~hPgNIlv~~~---------------~~g~i~LiDFG~~~~l~ 206 (864)
+++ |..+|.. +|+|+||||.|||+..+ ..+.++|+|||++..+.
T Consensus 126 QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~ 193 (1021)
T PTZ00266 126 QLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIG 193 (1021)
T ss_pred HHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccc
Confidence 544 7778874 49999999999999642 12458999999887653
|
|
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.7e-10 Score=117.92 Aligned_cols=80 Identities=20% Similarity=0.333 Sum_probs=51.8
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHHH----HhcCeeccCCCCCCeEEccCCCCceEEEeccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQI----YVDGFFNGDPHPGNFLVSKDPPHRPILLDFGL 201 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~i----~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~ 201 (864)
.+.-.+.||.+. .-++.++..-. +.-+++++-.+.-+.++.+ -.||++|||+||+|||+++. |.|+|+|||+
T Consensus 163 n~dV~IcMelMs-~C~ekLlkrik-~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~--GniKlCDFGI 238 (391)
T KOG0983|consen 163 NTDVFICMELMS-TCAEKLLKRIK-GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDER--GNIKLCDFGI 238 (391)
T ss_pred CchHHHHHHHHH-HHHHHHHHHhc-CCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccC--CCEEeecccc
Confidence 445557788663 22333332222 2234444444433333333 26899999999999999976 9999999999
Q ss_pred ccccChHH
Q 002927 202 TKKLSSSM 209 (864)
Q Consensus 202 ~~~l~~~~ 209 (864)
++++.+..
T Consensus 239 sGrlvdSk 246 (391)
T KOG0983|consen 239 SGRLVDSK 246 (391)
T ss_pred cceeeccc
Confidence 99987653
|
|
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.1e-10 Score=121.38 Aligned_cols=139 Identities=19% Similarity=0.288 Sum_probs=90.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|+||+|+.+ +++.||||+.+...... .+.+...|.
T Consensus 5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~------------------------------------~~~~~~~e~ 48 (282)
T cd07831 5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL------------------------------------EQVNNLREI 48 (282)
T ss_pred eeccccccceEEEEEEcCCCcEEEEEEehhccCCc------------------------------------hhhhHHHHH
Confidence 56999999999999976 79999999765322110 000112243
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-c--CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~--~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++.. ++. +.+...+. . ...+++|||++| ++.+.........+...+...+.+++
T Consensus 49 ~~l~~l~~-----------------h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~ 110 (282)
T cd07831 49 QALRRLSP-----------------HPNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLL 110 (282)
T ss_pred HHHhhcCC-----------------CCCccceEEEEecCCCCcEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 33333321 111 22223332 3 567899999987 44444322223355566665555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|.||+++. +.++|+|||++..+.
T Consensus 111 ~~L~~LH~~~i~H~dl~p~ni~l~~---~~~kl~dfg~~~~~~ 150 (282)
T cd07831 111 KSLDHMHRNGIFHRDIKPENILIKD---DILKLADFGSCRGIY 150 (282)
T ss_pred HHHHHHHHCCceecccCHHHEEEcC---CCeEEEecccccccc
Confidence 78899999999999999999984 799999999987653
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.08 E-value=6.6e-10 Score=120.67 Aligned_cols=79 Identities=15% Similarity=0.237 Sum_probs=60.6
Q ss_pred cCCceEEEeecCCcCCCChHHHhh------------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCC
Q 002927 126 SSETVLILEFMDGIRLNDCESLEA------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP 191 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~------------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~ 191 (864)
....+++|||++|.+|.++..... ..++...+...+.+++ +..+|..|++|||++|.||+++++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~-- 156 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN-- 156 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC--
Confidence 567899999999999987753211 1245555555554444 778999999999999999999865
Q ss_pred CceEEEecccccccC
Q 002927 192 HRPILLDFGLTKKLS 206 (864)
Q Consensus 192 g~i~LiDFG~~~~l~ 206 (864)
+.++|+|||++..+.
T Consensus 157 ~~~kl~dfg~~~~~~ 171 (288)
T cd05093 157 LLVKIGDFGMSRDVY 171 (288)
T ss_pred CcEEeccCCcccccc
Confidence 899999999987654
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.8e-10 Score=125.19 Aligned_cols=145 Identities=18% Similarity=0.262 Sum_probs=90.1
Q ss_pred cccccc-ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 4 MFMDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 4 ~F~~fd-~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
+...|. .++||+|++|.||+|+.. +|+.||||+.+....... +.
T Consensus 13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------~~----- 58 (342)
T cd07879 13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEI-----------------------------FA----- 58 (342)
T ss_pred cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcccccc-----------------------------ch-----
Confidence 344454 489999999999999975 799999998653221000 00
Q ss_pred hccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-------cCCceEEEeecCCcCCCChHHHhhcCCCH
Q 002927 82 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNK 154 (864)
Q Consensus 82 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~ 154 (864)
.++.+|.+.+.++.+.. -+.+..++. ....++||||+.+ .+.+ .....+..
T Consensus 59 -~~~~~e~~~l~~l~h~n-----------------iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~---~~~~~~~~ 116 (342)
T cd07879 59 -KRAYRELTLLKHMQHEN-----------------VIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQK---IMGHPLSE 116 (342)
T ss_pred -hHHHHHHHHHHhcCCCC-----------------ccchhheecccccCCCCceEEEEeccccc-CHHH---HHcCCCCH
Confidence 01223443333332210 011111111 2345899999964 3332 22234555
Q ss_pred HHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 155 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 155 ~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+...+.+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++....
T Consensus 117 ~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~--~~~kL~dfg~~~~~~ 168 (342)
T cd07879 117 DKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNED--CELKILDFGLARHAD 168 (342)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC--CCEEEeeCCCCcCCC
Confidence 55555444444 778899999999999999999865 899999999987653
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.3e-10 Score=121.60 Aligned_cols=137 Identities=18% Similarity=0.187 Sum_probs=92.3
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.|+.|++|.||+|+.. ++..|++|..+...... +-.
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~-------------------------------------~~~ 53 (291)
T cd05094 11 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAA-------------------------------------RKD 53 (291)
T ss_pred eeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHH-------------------------------------HHH
Confidence 67999999999999842 45678999765322110 112
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh-----------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA----------- 149 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~----------- 149 (864)
+.+|+..+.++++ + .|.+++ . ....+|||||++|.+|.++.....
T Consensus 54 ~~~e~~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~ 113 (291)
T cd05094 54 FQREAELLTNLQH------------------E--HIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQP 113 (291)
T ss_pred HHHHHHHHhcCCC------------------C--CcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCccccccccccc
Confidence 4446555555432 1 123333 2 456799999999999988754221
Q ss_pred ----cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 150 ----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 150 ----~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
...+...+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 114 ~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~--~~~~l~dfg~a~~~~ 174 (291)
T cd05094 114 RQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN--LLVKIGDFGMSRDVY 174 (291)
T ss_pred ccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC--CcEEECCCCcccccC
Confidence 1133344444444433 678899999999999999999865 899999999987654
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.8e-10 Score=122.89 Aligned_cols=79 Identities=25% Similarity=0.350 Sum_probs=58.6
Q ss_pred cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 202 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 202 (864)
....++||||+ +.++.+...... ..+....+...+.+++ +..+|..|++|+|++|.||+++++ +.++|+|||++
T Consensus 70 ~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~--~~~~l~d~~~~ 146 (283)
T cd07830 70 NDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGP--EVVKIADFGLA 146 (283)
T ss_pred CCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCC--CCEEEeecccc
Confidence 45568999999 556655543222 2345555555555544 788899999999999999999865 89999999998
Q ss_pred cccCh
Q 002927 203 KKLSS 207 (864)
Q Consensus 203 ~~l~~ 207 (864)
..+..
T Consensus 147 ~~~~~ 151 (283)
T cd07830 147 REIRS 151 (283)
T ss_pred eeccC
Confidence 76654
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.9e-10 Score=124.64 Aligned_cols=139 Identities=21% Similarity=0.258 Sum_probs=90.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++|++|++|.||+|... +|+.||||+.......... +-.+.+|+
T Consensus 23 ~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~-----------------------------------~~~~~~Ei 67 (345)
T cd07877 23 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-----------------------------------AKRTYREL 67 (345)
T ss_pred EEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHH-----------------------------------HHHHHHHH
Confidence 68999999999999964 8999999987643221100 00133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
..+.++++.. -+.+..++. ....+++++++ |.+|.++.. ........+...+.
T Consensus 68 ~~l~~l~h~~-----------------iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~--~~~l~~~~~~~i~~ 127 (345)
T cd07877 68 RLLKHMKHEN-----------------VIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVK--CQKLTDDHVQFLIY 127 (345)
T ss_pred HHHHHcCCCc-----------------ccceeeeeeecccccccccEEEEehhc-ccCHHHHHh--cCCCCHHHHHHHHH
Confidence 5555553311 111222221 13357888887 667766533 22345444444444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+++ +..+|+.|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 128 qi~~aL~~LH~~~ivH~dlkp~NIll~~~--~~~kl~dfg~~~~~~ 171 (345)
T cd07877 128 QILRGLKYIHSADIIHRDLKPSNLAVNED--CELKILDFGLARHTD 171 (345)
T ss_pred HHHHHHHHHHHCCeeecCCChHHEEEcCC--CCEEEeccccccccc
Confidence 433 788999999999999999999865 899999999987643
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.3e-10 Score=122.39 Aligned_cols=141 Identities=16% Similarity=0.182 Sum_probs=91.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|+||+|+.+ +|+.||||+.+......- . .-++.+|.
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~-----------------------------~------~~~~~~E~ 49 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEG-----------------------------V------PSTAIREI 49 (283)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeeccccccc-----------------------------c------hhHHHHHH
Confidence 56999999999999976 899999998754321100 0 00123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~-- 165 (864)
..+.++++. .-+.+..... ....+++|||+++ +|.++..... ...+...+...+.+++
T Consensus 50 ~~l~~l~~~-----------------~iv~~~~~~~~~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~ 111 (283)
T cd07835 50 SLLKELNHP-----------------NIVRLLDVVHSENKLYLVFEFLDL-DLKKYMDSSPLTGLDPPLIKSYLYQLLQG 111 (283)
T ss_pred HHHHhcCCC-----------------CccCHhheeccCCeEEEEEeccCc-CHHHHHhhCCCCCCCHHHHHHHHHHHHHH
Confidence 444443221 0111111222 4567899999964 6766543221 1355555555554444
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 112 L~~lH~~~~~H~dl~p~nil~~~~--~~~~l~df~~~~~~~ 150 (283)
T cd07835 112 IAYCHSHRVLHRDLKPQNLLIDRE--GALKLADFGLARAFG 150 (283)
T ss_pred HHHHHHCCeeCCCCCHHHEEEcCC--CcEEEeecccccccC
Confidence 788999999999999999999864 899999999987654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.07 E-value=6.8e-10 Score=114.83 Aligned_cols=140 Identities=19% Similarity=0.212 Sum_probs=96.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++|++|++|+||+++.. +++.|+||+.+...... . .-++.+|+
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~---~---------------------------------~~~~~~e~ 48 (225)
T smart00221 5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEK---Q---------------------------------REEFLREI 48 (225)
T ss_pred eEeecCCCeEEEEEEEcCCCcEEEEEeeccccchH---H---------------------------------HHHHHHHH
Confidence 68999999999999987 48999999877543220 0 00233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++++ ..+++++ . ....+++|||++|.+|.++........+...+...+.+++
T Consensus 49 ~~~~~~~~--------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~ 108 (225)
T smart00221 49 RILKKLKH--------------------PNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQIL 108 (225)
T ss_pred HHHHhCCC--------------------CChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHH
Confidence 55444421 1122222 1 4678899999999999887543221145444444444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+...
T Consensus 109 ~~l~~lh~~~i~h~di~~~ni~v~~~--~~~~l~d~g~~~~~~~~ 151 (225)
T smart00221 109 EALEYLHSLGIVHRDLKPENILLGMD--GLVKLADFGLARFIHRD 151 (225)
T ss_pred HHHHHHHhCCeecCCCCHHHEEEcCC--CCEEEeeCceeeEecCc
Confidence 678899999999999999999865 89999999998877554
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.4e-10 Score=121.20 Aligned_cols=81 Identities=19% Similarity=0.177 Sum_probs=58.9
Q ss_pred cCCceEEEeecCCcCCCChHHHhh------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCC---CCce
Q 002927 126 SSETVLILEFMDGIRLNDCESLEA------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP---PHRP 194 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~---~g~i 194 (864)
....+++|||++|.+|.+...... .......+...+.+++ +..+|..|++|+|++|.||+++.+. ...+
T Consensus 71 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~ 150 (269)
T cd05044 71 NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVV 150 (269)
T ss_pred CCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcce
Confidence 456789999999999987754211 1133344444444443 6788999999999999999998651 1279
Q ss_pred EEEecccccccC
Q 002927 195 ILLDFGLTKKLS 206 (864)
Q Consensus 195 ~LiDFG~~~~l~ 206 (864)
+|+|||++..+.
T Consensus 151 ~l~dfg~~~~~~ 162 (269)
T cd05044 151 KIGDFGLARDIY 162 (269)
T ss_pred EECCcccccccc
Confidence 999999987664
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.1e-10 Score=132.15 Aligned_cols=140 Identities=18% Similarity=0.196 Sum_probs=102.0
Q ss_pred cccccccceeeEEEEec--CCC--EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV--DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~--~G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+-||+||||.|+||.++ +|+ .||||.++++....+- -||+
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~m------------------------------------ddfl 159 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIM------------------------------------DDFL 159 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhH------------------------------------HHHH
Confidence 45999999999999986 565 5799999987654321 1478
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHH-hhcCCCHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEIT 162 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~-~~~~~~~~~l~~~~~ 162 (864)
+|+..+.+++|. ++-++|. .-...||||.+++++|-+.+.- .+..+-...+...+.
T Consensus 160 rEas~M~~L~H~--------------------hliRLyGvVl~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~ 219 (1039)
T KOG0199|consen 160 REASHMLKLQHP--------------------HLIRLYGVVLDQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAM 219 (1039)
T ss_pred HHHHHHHhccCc--------------------ceeEEeeeeccchhhHHhhhcccchHHHHHhhccccceeHHHHHHHHH
Confidence 899998887652 2334443 5567799999999999887543 112233344555444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
++. +.++-..++||||+-.-||++-.. ..++|+|||+++.|...
T Consensus 220 QiA~aM~YLeskrlvHRDLAARNlllasp--rtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 220 QIAKAMQYLESKRLVHRDLAARNLLLASP--RTVKICDFGLMRALGEN 265 (1039)
T ss_pred HHHHHHHHHhhhhhhhhhhhhhhheeccc--ceeeeecccceeccCCC
Confidence 443 555567999999999999999864 68999999999988754
|
|
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.8e-10 Score=121.58 Aligned_cols=137 Identities=16% Similarity=0.205 Sum_probs=91.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||++... +|+.||+|+........ .+ .+.+|.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~-------------------------------~~------~~~~e~ 67 (293)
T cd06647 25 EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPK-------------------------------KE------LIINEI 67 (293)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeccccchH-------------------------------HH------HHHHHH
Confidence 67999999999999965 78999999753211000 00 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++.+ +. +.+++ . ....++||||++|.+|.++.. ........+...+.+++
T Consensus 68 ~~l~~l~h------------------p~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~l~~~~~~~i~~~l~ 125 (293)
T cd06647 68 LVMRENKH------------------PN--IVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECL 125 (293)
T ss_pred HHHhhcCC------------------CC--eeehhheeeeCCcEEEEEecCCCCcHHHHHh--hcCCCHHHHHHHHHHHH
Confidence 33333321 11 22222 2 456789999999999987743 33344444444444433
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+.+.
T Consensus 126 ~al~~LH~~gi~H~dL~p~Nili~~~--~~~kL~dfg~~~~~~~~ 168 (293)
T cd06647 126 QALEFLHSNQVIHRDIKSDNILLGMD--GSVKLTDFGFCAQITPE 168 (293)
T ss_pred HHHHHHHhCCEeeccCCHHHEEEcCC--CCEEEccCcceeccccc
Confidence 778899999999999999999865 88999999988766543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.3e-10 Score=124.98 Aligned_cols=141 Identities=18% Similarity=0.278 Sum_probs=93.2
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+-||+|+-+.||++...+.+.+|+|-.. ....|-+ .++ -|.+|..
T Consensus 367 k~iG~GGSSkV~kV~~s~~~iyalkkv~-----~~~~D~q--------------------tl~----------gy~nEI~ 411 (677)
T KOG0596|consen 367 KQIGSGGSSKVFKVLNSDKQIYALKKVV-----LLEADNQ--------------------TLD----------GYRNEIA 411 (677)
T ss_pred HhhcCCCcceeeeeecCCCcchhhhHHH-----HhhcCHH--------------------HHH----------HHHHHHH
Confidence 5699999999999997777778877211 0111111 011 1677888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHH----HHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV----EEIT 162 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~----~~~~ 162 (864)
-+.+|... ..|-.+|. .+..+|||||=+ .+|..++.- ..+.++.-.. +.++
T Consensus 412 lL~KLkg~-------------------~~IIqL~DYEv~d~~lYmvmE~Gd-~DL~kiL~k-~~~~~~~~~lk~ywkqML 470 (677)
T KOG0596|consen 412 LLNKLKGH-------------------DKIIQLYDYEVTDGYLYMVMECGD-IDLNKILKK-KKSIDPDWFLKFYWKQML 470 (677)
T ss_pred HHHHhcCC-------------------ceEEEEeeeeccCceEEEEeeccc-ccHHHHHHh-ccCCCchHHHHHHHHHHH
Confidence 88887542 45556664 566789999754 556555432 2222322222 2222
Q ss_pred HHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHH
Q 002927 163 RAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 211 (864)
Q Consensus 163 ~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 211 (864)
.+++.||.+||||+||||.|+++-+ |+++|||||++..+..+...
T Consensus 471 -~aV~~IH~~gIVHSDLKPANFLlVk---G~LKLIDFGIA~aI~~DTTs 515 (677)
T KOG0596|consen 471 -LAVKTIHQHGIVHSDLKPANFLLVK---GRLKLIDFGIANAIQPDTTS 515 (677)
T ss_pred -HHHHHHHHhceeecCCCcccEEEEe---eeEEeeeechhcccCccccc
Confidence 2367789999999999999999863 89999999999988776543
|
|
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.06 E-value=8.8e-11 Score=119.72 Aligned_cols=139 Identities=17% Similarity=0.174 Sum_probs=85.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH-
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE- 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E- 88 (864)
.-||.|+||.|++-+.+ +|+..|||-.|-...+. + ..++..|+|-..-
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~k---e---------------------------q~rll~e~d~~mks 119 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEK---E---------------------------QKRLLMEHDTVMKS 119 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchH---H---------------------------HHHHHHHHHHHHhh
Confidence 56999999999999976 89999999766433211 1 1122233332222
Q ss_pred --HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHH----hhcCCCHHHHHHHH-
Q 002927 89 --AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESL----EAFGVNKQKVVEEI- 161 (864)
Q Consensus 89 --a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~----~~~~~~~~~l~~~~- 161 (864)
.-|+.+|..... ..+..+++||.++ .+++.+-+. .+..+..+-+....
T Consensus 120 ~~cp~IVkfyGa~F------------------------~EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~Itv 174 (361)
T KOG1006|consen 120 SNCPNIVKFYGALF------------------------SEGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITV 174 (361)
T ss_pred cCCcHHHHHhhhhh------------------------cCCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheee
Confidence 224555544321 1566789999986 455443221 12222222222221
Q ss_pred --HHHHHHHH-HhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 162 --TRAYAHQI-YVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 162 --~~~~l~~i-~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+++ |..+ -+..++|||+||+|||+++. |.++|+|||+++.+-+
T Consensus 175 atV~A-L~yLK~~lkiIHRDvKPSNILldr~--G~vKLCDFGIcGqLv~ 220 (361)
T KOG1006|consen 175 ATVDA-LDYLKEELKIIHRDVKPSNILLDRH--GDVKLCDFGICGQLVD 220 (361)
T ss_pred eehhH-HHHHHHHhhhhhccCChhheEEecC--CCEeeecccchHhHHH
Confidence 222 3333 25789999999999999976 8999999999998754
|
|
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.06 E-value=5.9e-10 Score=120.83 Aligned_cols=138 Identities=14% Similarity=0.151 Sum_probs=88.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+++.. +|+.||||..+...... .+.++.+|.
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~------------------------------------~~~~~~~e~ 53 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEK------------------------------------EQKRLLMDL 53 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEEEEEEehhccChH------------------------------------HHHHHHHHH
Confidence 67999999999999976 79999999765322110 011234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHH----hhcCCCHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESL----EAFGVNKQKVVEEI 161 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~----~~~~~~~~~l~~~~ 161 (864)
..+.++.. ++ .|++++. ....+++|||+++ ++.++... ....+....+...+
T Consensus 54 ~~l~~~~~-----------------~~--~iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~ 113 (288)
T cd06616 54 DVVMRSSD-----------------CP--YIVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIA 113 (288)
T ss_pred HHHHHhcC-----------------CC--CEeeeeeEEecCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHH
Confidence 44444321 11 2333332 5567899999874 44443211 11234444444444
Q ss_pred HHHH--HHHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 162 TRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 162 ~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+++ ++.+|. .|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 114 ~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~--~~~kl~dfg~~~~~~ 159 (288)
T cd06616 114 VATVKALNYLKEELKIIHRDVKPSNILLDRN--GNIKLCDFGISGQLV 159 (288)
T ss_pred HHHHHHHHHHhhcCCeeccCCCHHHEEEccC--CcEEEeecchhHHhc
Confidence 4433 677876 599999999999999865 889999999886543
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.7e-09 Score=105.65 Aligned_cols=145 Identities=21% Similarity=0.279 Sum_probs=97.9
Q ss_pred cccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 9 VETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 9 d~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+..++-.|.-|.|+++.. .|+..+||-..|.--..-.-|.++-+. ...+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~-----------------------------Rt~~E 60 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRK-----------------------------RTKQE 60 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHH-----------------------------HHHHH
Confidence 357889999999999986 799999996543322222222221111 13468
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCC-cCCCChHHHhh-cC-CCHH--HHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDG-IRLNDCESLEA-FG-VNKQ--KVVEEI 161 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G-~~L~~~~~~~~-~~-~~~~--~l~~~~ 161 (864)
|+-+.+++.. .+.+|.++. .....|.|||++| .++.+.....- .. .+.. .+++.+
T Consensus 61 ar~l~k~~~~------------------GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~i 122 (229)
T KOG3087|consen 61 ARLLAKCRAL------------------GIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRI 122 (229)
T ss_pred HHHHHHHHHh------------------CCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHH
Confidence 9988888763 688999987 6778999999999 45555432211 11 1222 334433
Q ss_pred HHHHHHHHHhcCeeccCCCCCCeEEccCCCCc--eEEEeccccc
Q 002927 162 TRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHR--PILLDFGLTK 203 (864)
Q Consensus 162 ~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~--i~LiDFG~~~ 203 (864)
-+. +.-+|..+++|+||.-+||++.++ +++ +.|||||+..
T Consensus 123 G~~-igklH~ndiiHGDLTTSNill~~~-~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 123 GEL-IGKLHDNDIIHGDLTTSNILLRSD-GNQITPILIDFGLSS 164 (229)
T ss_pred HHH-HHHhhhCCeecccccccceEEecC-CCcCceEEEeecchh
Confidence 333 556799999999999999999875 344 4899999854
|
|
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.2e-10 Score=123.45 Aligned_cols=148 Identities=24% Similarity=0.229 Sum_probs=101.2
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
++-||+|-|+.|-.|+.. +|+.|||||....-.+.+ . .. .+.+|
T Consensus 23 ekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~----s-------------------------t~------hlfqE 67 (864)
T KOG4717|consen 23 EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTL----S-------------------------TG------HLFQE 67 (864)
T ss_pred hhhhcCCceehhhhhhhhcccceeEEEEecccccchh----h-------------------------hh------HHHHH
Confidence 467999999999999965 999999999653221110 0 00 12346
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
.+.++..++. ..|.+-+|+. .++.+|++|.=+|+.|.|+.--...|+.....-+...+++
T Consensus 68 VRCMKLVQHp-----------------NiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~A 130 (864)
T KOG4717|consen 68 VRCMKLVQHP-----------------NIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHA 130 (864)
T ss_pred HHHHHHhcCc-----------------CeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHH
Confidence 6666665441 1244445554 6889999999999999998765555655332222222222
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 210 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 210 (864)
+.+.|+..+|||||||+|+.+-+. -|-++|.|||+.-.+-+..+
T Consensus 131 I~YCHqLHVVHRDLKPENVVFFEK-lGlVKLTDFGFSNkf~PG~k 174 (864)
T KOG4717|consen 131 ISYCHQLHVVHRDLKPENVVFFEK-LGLVKLTDFGFSNKFQPGKK 174 (864)
T ss_pred HHHHhhhhhhcccCCcceeEEeee-cCceEeeeccccccCCCcch
Confidence 445577889999999999987653 58899999999987766544
|
|
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.05 E-value=7.1e-10 Score=125.31 Aligned_cols=140 Identities=17% Similarity=0.239 Sum_probs=97.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-||+|.||.|-.|+.. +|.+||||+......+. ..+.. +.+|.
T Consensus 62 ~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~------------------------~~~~k-----------~~rev 106 (596)
T KOG0586|consen 62 KTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNP------------------------SKRQK-----------LGREV 106 (596)
T ss_pred eeeccceeEEEEeeEecCCCceEEEEEehhcccCh------------------------HHHHH-----------HHHHH
Confidence 56999999999999976 89999999765322111 00000 22344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH---
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA--- 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~--- 164 (864)
+-+..+. ++++ .+-.++. ....||||||+.|+.+.+.. .+.+.+.+..++....-
T Consensus 107 ~imk~l~------------------HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl--~~~gr~~e~~ar~~F~q~vs 166 (596)
T KOG0586|consen 107 DIMKSLN------------------HPNIVKLFSVIETEATLYLVMEYASGGELFDYL--VKHGRMKEKEARAKFRQIVS 166 (596)
T ss_pred HHHHhcC------------------CcceeeeeeeeeecceeEEEEEeccCchhHHHH--HhcccchhhhhhhhhHHHHH
Confidence 4444432 3333 4444444 56688999999999998874 45555555555444332
Q ss_pred HHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.++.+|.++|+|||||..|||++.+ ..++|.|||+...++.
T Consensus 167 aveYcH~k~ivHrdLk~eNilL~~~--mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 167 AVEYCHSKNIVHRDLKAENILLDEN--MNIKIADFGFSTFFDY 207 (596)
T ss_pred HHHHHhhcceeccccchhhcccccc--cceeeeccccceeecc
Confidence 2888999999999999999999965 7799999999988764
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.7e-09 Score=110.41 Aligned_cols=49 Identities=20% Similarity=0.365 Sum_probs=42.4
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKM 216 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l 216 (864)
++.+|..||.|||+||||++|+.+ .-++|+|||+++.-..+++..+..=
T Consensus 169 LKYLHsA~ILHRDIKPGNLLVNSN--CvLKICDFGLARvee~d~~~hMTqE 217 (449)
T KOG0664|consen 169 LKYLHTANILHRDIKPGNLLVNSN--CILKICDFGLARTWDQRDRLNMTHE 217 (449)
T ss_pred hHHHhhcchhhccCCCccEEeccC--ceEEecccccccccchhhhhhhHHH
Confidence 788999999999999999999965 8899999999998887777665443
|
|
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.1e-09 Score=116.47 Aligned_cols=139 Identities=14% Similarity=0.190 Sum_probs=94.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCC-hHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQG-IKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~-i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+.|++|++|.||+++.+ +|+.||||..... ..... .-++.+|
T Consensus 6 ~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~~~e 49 (256)
T cd08218 6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKE------------------------------------REESRKE 49 (256)
T ss_pred EEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHH------------------------------------HHHHHHH
Confidence 67999999999999976 7999999975421 10000 0013344
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITR 163 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~ 163 (864)
.+.++++.+ + .+++++ . ....+|||||++|.+|.+...... .......+...+.+
T Consensus 50 ~~~l~~l~~------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 109 (256)
T cd08218 50 VAVLSNMKH------------------P--NIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQ 109 (256)
T ss_pred HHHHHhCCC------------------C--CeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHH
Confidence 444444322 1 123333 2 456889999999999887654322 23445555554444
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+. +..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 110 l~~~l~~lh~~~i~h~~l~~~nil~~~~--~~~~l~d~~~~~~~~~ 153 (256)
T cd08218 110 ICLALKHVHDRKILHRDIKSQNIFLTKD--GTIKLGDFGIARVLNS 153 (256)
T ss_pred HHHHHHHHHhCCEecCCCCHHHEEEcCC--CCEEEeeccceeecCc
Confidence 44 678899999999999999999865 7899999999887654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.05 E-value=6.2e-10 Score=119.93 Aligned_cols=144 Identities=17% Similarity=0.198 Sum_probs=92.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.. +|+.|++|..+....... . +-++.+|.
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-----------------------------~------~~~~~~e~ 49 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEG-----------------------------I------PKTALREI 49 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEeccccccch-----------------------------h------HHHHHHHH
Confidence 56999999999999975 799999998765432210 0 00122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+...+. ....+++|||+++ ++.+.........+...+...+.+++ +
T Consensus 50 ~~l~~l~~~-----------------~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l 111 (283)
T cd05118 50 KLLKELNHP-----------------NIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGL 111 (283)
T ss_pred HHHHHhcCC-----------------CcchHHHhhccCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHH
Confidence 333333210 0111111111 4566899999987 66555432222445544444444433 6
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
..+|..|++|+|+||.||+++.+ +.++|+|||.+..+....
T Consensus 112 ~~LH~~~i~H~dl~p~nili~~~--~~~~l~df~~~~~~~~~~ 152 (283)
T cd05118 112 AFCHSHGILHRDLKPENLLINTE--GVLKLADFGLARSFGSPV 152 (283)
T ss_pred HHHHHCCeeecCcCHHHEEECCC--CcEEEeeeeeeEecCCCc
Confidence 78999999999999999999865 899999999988776543
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.05 E-value=5.3e-10 Score=118.48 Aligned_cols=140 Identities=15% Similarity=0.129 Sum_probs=93.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+++.+ +|+.||||+......... + ..++..|+
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~--~---------------------------------~~~~~~e~ 50 (256)
T cd08530 6 KKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQK--E---------------------------------REDAVNEI 50 (256)
T ss_pred eeecCCCceeEEEEEECCCCCEEEEEEEehhhccHH--H---------------------------------HHHHHHHH
Confidence 56999999999999865 889999998653221100 0 00122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHh---hcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l~~~~~ 162 (864)
+.+.++.+ ..|++++. ....++||||++|.+|.++.... ....+...+...+.
T Consensus 51 ~~l~~l~~--------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 110 (256)
T cd08530 51 RILASVNH--------------------PNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFI 110 (256)
T ss_pred HHHHhCCC--------------------CCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHH
Confidence 33333221 12232221 45678999999999998875321 12345555555544
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+++ +..+|..|++|+|++|.||+++.+ ++++|+|||++..+..
T Consensus 111 ~l~~al~~lh~~~i~h~~l~~~ni~~~~~--~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 111 QLLRGLQALHEQKILHRDLKSANILLVAN--DLVKIGDLGISKVLKK 155 (256)
T ss_pred HHHHHHHHHhhCCcccCCCCcceEEEecC--CcEEEeeccchhhhcc
Confidence 443 678899999999999999999864 8899999999876654
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.8e-10 Score=124.74 Aligned_cols=75 Identities=16% Similarity=0.271 Sum_probs=54.6
Q ss_pred CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 128 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 128 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+++|||+++ ++.+.. ....+....+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++...
T Consensus 82 ~~~lv~e~~~~-~l~~~~--~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~--~~~kl~dfg~~~~~ 156 (336)
T cd07849 82 DVYIVQELMET-DLYKLI--KTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTN--CDLKICDFGLARIA 156 (336)
T ss_pred eEEEEehhccc-CHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCC--CCEEECcccceeec
Confidence 46899999986 443332 223345555444444443 788999999999999999999865 89999999998765
Q ss_pred Ch
Q 002927 206 SS 207 (864)
Q Consensus 206 ~~ 207 (864)
..
T Consensus 157 ~~ 158 (336)
T cd07849 157 DP 158 (336)
T ss_pred cc
Confidence 43
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.04 E-value=3.4e-10 Score=123.90 Aligned_cols=76 Identities=13% Similarity=0.221 Sum_probs=54.3
Q ss_pred ceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 129 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.++||||+++. +.+.........+...+...+.+++ +..+|..|++|+|++|+||+++++ +.++|+|||++....
T Consensus 90 ~~lv~~~~~~~-l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~ 166 (311)
T cd07866 90 VYMVTPYMDHD-LSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQ--GILKIADFGLARPYD 166 (311)
T ss_pred EEEEEecCCcC-HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC--CCEEECcCccchhcc
Confidence 47999999863 3222111122345555555444444 788999999999999999999865 899999999988654
Q ss_pred h
Q 002927 207 S 207 (864)
Q Consensus 207 ~ 207 (864)
.
T Consensus 167 ~ 167 (311)
T cd07866 167 G 167 (311)
T ss_pred C
Confidence 3
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.04 E-value=6.8e-10 Score=118.97 Aligned_cols=81 Identities=14% Similarity=0.323 Sum_probs=61.0
Q ss_pred cCCceEEEeecCCcCCCChHHH---hhcCCCHHHHHHHHHHHH--HHHHHh-cCeeccCCCCCCeEEccCCCCceEEEec
Q 002927 126 SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDF 199 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~---~~~~~~~~~l~~~~~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDF 199 (864)
....+|+|||++|.+|.++... .....+...+...+.+++ +..+|. .|++|+|++|.||+++.+ ++++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~--~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGED--DKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCC--CcEEEecc
Confidence 5678899999999999887532 122345555555554444 677885 789999999999999865 89999999
Q ss_pred ccccccChH
Q 002927 200 GLTKKLSSS 208 (864)
Q Consensus 200 G~~~~l~~~ 208 (864)
|++......
T Consensus 159 g~~~~~~~~ 167 (269)
T cd08528 159 GLAKQKQPE 167 (269)
T ss_pred cceeecccc
Confidence 999876543
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.2e-10 Score=137.31 Aligned_cols=75 Identities=19% Similarity=0.289 Sum_probs=54.9
Q ss_pred ceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 129 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
-++-||||+-..+.++.......-++....+...+++ +.+||..|+||||+||.||+++++ +.|+|.|||++..+
T Consensus 671 LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~--~~VKIGDFGLAt~~ 747 (1351)
T KOG1035|consen 671 LYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSR--NSVKIGDFGLATDL 747 (1351)
T ss_pred EEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCC--CCeeecccccchhh
Confidence 3689999998777776543322212333333333333 778999999999999999999965 89999999999864
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=9.3e-10 Score=120.09 Aligned_cols=74 Identities=19% Similarity=0.301 Sum_probs=49.1
Q ss_pred ceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 129 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+++||++.. .+.+.... ........+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||+++.+.
T Consensus 102 ~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~--~~~~l~DFGla~~~~ 177 (294)
T PHA02882 102 RFILLEKLVE-NTKEIFKR-IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGN--NRGYIIDYGIASHFI 177 (294)
T ss_pred EEEEEehhcc-CHHHHHHh-hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--CcEEEEEcCCceeec
Confidence 3678887643 33332211 11123333333333333 778999999999999999999854 889999999998764
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.03 E-value=7.5e-10 Score=123.01 Aligned_cols=139 Identities=20% Similarity=0.186 Sum_probs=90.5
Q ss_pred cccccccceeeEEEEec-C--CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 11 TPLATASIAQVHRATLV-D--GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~--G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
+.|++|++|.||+++.. + |+.||||+.+....... . .-++.+
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~-----------------------------~------~~~~~~ 50 (332)
T cd07857 6 KELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKI-----------------------------L------AKRALR 50 (332)
T ss_pred EEccccCCeEEEEEEeCCCCcCceEEEEEeccccccch-----------------------------h------HHHHHH
Confidence 57999999999999976 5 88999998653221100 0 001333
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHH
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 159 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~ 159 (864)
|...+.++.+ ++ .|++++. ....+++|||+++ +|.+... ....++...+..
T Consensus 51 E~~~l~~l~~-----------------h~--~iv~~~~~~~~~~~~~~~~~~~~e~~~~-~L~~~l~-~~~~~~~~~~~~ 109 (332)
T cd07857 51 ELKLLRHFRG-----------------HK--NITCLYDMDIVFPGNFNELYLYEELMEA-DLHQIIR-SGQPLTDAHFQS 109 (332)
T ss_pred HHHHHHHhcC-----------------CC--ChheeeeeeeeccccCCcEEEEEecccC-CHHHHHh-cCCCCCHHHHHH
Confidence 5555554421 11 1112211 2345789999864 5555432 223455555555
Q ss_pred HHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 160 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 160 ~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+.+++ +..+|..|++|+|+||+|||++.+ +.++|+|||++..+..
T Consensus 110 ~~~qi~~aL~~LH~~givH~dlkp~Nili~~~--~~~kl~Dfg~a~~~~~ 157 (332)
T cd07857 110 FIYQILCGLKYIHSANVLHRDLKPGNLLVNAD--CELKICDFGLARGFSE 157 (332)
T ss_pred HHHHHHHHHHHHHhCCcccCCCCHHHeEEcCC--CCEEeCcCCCceeccc
Confidence 555544 788999999999999999999865 8999999999987654
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.03 E-value=4.7e-10 Score=125.30 Aligned_cols=75 Identities=23% Similarity=0.375 Sum_probs=56.8
Q ss_pred CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 128 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 128 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..++||||+ |.+|.++.. ...++...+...+.+++ +..+|..|++|+|++|.||+++.+ ++++|+|||++..+
T Consensus 94 ~~~lv~e~~-~~~L~~~~~--~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~--~~~kL~dfg~~~~~ 168 (343)
T cd07851 94 DVYLVTHLM-GADLNNIVK--CQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED--CELKILDFGLARHT 168 (343)
T ss_pred cEEEEEecC-CCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC--CCEEEccccccccc
Confidence 368999998 557766543 23455555555544444 778999999999999999999865 89999999998766
Q ss_pred Ch
Q 002927 206 SS 207 (864)
Q Consensus 206 ~~ 207 (864)
..
T Consensus 169 ~~ 170 (343)
T cd07851 169 DD 170 (343)
T ss_pred cc
Confidence 43
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.4e-09 Score=117.42 Aligned_cols=144 Identities=19% Similarity=0.208 Sum_probs=91.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|++|.||+|+.+ +|+.||||+.+......- . ..++.+|.
T Consensus 5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-----------------------------~------~~~~~~e~ 49 (287)
T cd07838 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEG-----------------------------I------PLSTLREI 49 (287)
T ss_pred EEecccCceEEEEEEECCCCCEEEEEEeccccccch-----------------------------h------hhhHHHHH
Confidence 56999999999999987 699999998764322100 0 00122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cC-----CceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SS-----ETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEI 161 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~-----~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~ 161 (864)
..+.+++.. +++. +.+..... .. ..+++|||++| +|.++..... ...+...+...+
T Consensus 50 ~~l~~l~~~---------------~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~ 113 (287)
T cd07838 50 ALLKQLESF---------------EHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLM 113 (287)
T ss_pred HHHHHhhcc---------------CCCCcceEEEEEeeccCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHH
Confidence 334443321 0111 12222222 12 27899999986 5655543211 234555555555
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+++ +..+|..|++|+|++|+||+++.+ ++++|+|||++..++.
T Consensus 114 ~~i~~al~~LH~~~i~h~~l~~~nili~~~--~~~~l~dfg~~~~~~~ 159 (287)
T cd07838 114 RQLLRGVDFLHSHRIVHRDLKPQNILVTSD--GQVKIADFGLARIYSF 159 (287)
T ss_pred HHHHHHHHHHHHCCeeeccCChhhEEEccC--CCEEEeccCcceeccC
Confidence 5444 788999999999999999999965 8999999999877643
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.03 E-value=5.8e-10 Score=110.01 Aligned_cols=141 Identities=18% Similarity=0.223 Sum_probs=89.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.-||.|.+|||-+-++. +|+..|||-.+..+.. ...+++..|+|..+
T Consensus 52 ~elGrGayG~vekmrh~~sg~imAvKri~~tvn~------------------------------q~q~r~L~dldi~~-- 99 (282)
T KOG0984|consen 52 EELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNS------------------------------QEQKRLLMDLDIIM-- 99 (282)
T ss_pred hhhcCCccchhhheeeccCCeEEEEeeehhhcCh------------------------------HHHHHHHHhhhhhc--
Confidence 35899999999998876 8999999954433321 11222233333321
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE----ecCCceEEEeecCCcCCCChHH--HhhcCCCHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI----QSSETVLILEFMDGIRLNDCES--LEAFGVNKQKVVEEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~----~~~~~vLvmE~i~G~~L~~~~~--~~~~~~~~~~l~~~~~~ 163 (864)
+ ..+...+-..| .+.+-.+.||.++ .+|+.+.. +...+.-++.++-.++-
T Consensus 100 ----r-------------------~~~CPf~V~FyGa~~regdvwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~ 155 (282)
T KOG0984|consen 100 ----R-------------------TVDCPFTVHFYGALFREGDVWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAV 155 (282)
T ss_pred ----c-------------------CCCCCeEEEeehhhhccccEEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHH
Confidence 1 11222333333 2788899999886 34443321 23333344444444444
Q ss_pred HH---HHHHH-hcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 164 AY---AHQIY-VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 164 ~~---l~~i~-~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
.+ +..+| +..++|||+||+|||++.+ |+++++|||+++.+.+..
T Consensus 156 Svv~al~~L~~kL~vIHRDvKPsNiLIn~~--GqVKiCDFGIsG~L~dSi 203 (282)
T KOG0984|consen 156 SVVHALEFLHSKLSVIHRDVKPSNILINYD--GQVKICDFGISGYLVDSI 203 (282)
T ss_pred HHHHHHHHHHHHhhhhhccCCcceEEEccC--CcEEEcccccceeehhhh
Confidence 43 44455 4689999999999999976 999999999999987654
|
|
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.02 E-value=9.7e-10 Score=117.95 Aligned_cols=139 Identities=20% Similarity=0.213 Sum_probs=90.2
Q ss_pred cccccccceeeEEEEec----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.|+.|++|.||+|.++ +|+.||||+.+......... -++.
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~-----------------------------------~~~~ 49 (273)
T cd05074 5 RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDI-----------------------------------EEFL 49 (273)
T ss_pred hcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHH-----------------------------------HHHH
Confidence 57999999999999864 47899999876543221100 0133
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---c----C---CceEEEeecCCcCCCChHHHhhc-----C
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---S----S---ETVLILEFMDGIRLNDCESLEAF-----G 151 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~----~---~~vLvmE~i~G~~L~~~~~~~~~-----~ 151 (864)
+|.+.++++.+ + .+.+++. . + ..++++||.++.+|.+....... .
T Consensus 50 ~E~~~l~~l~h------------------~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 109 (273)
T cd05074 50 REAACMKEFDH------------------P--NVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFT 109 (273)
T ss_pred HHHHHHhcCCC------------------C--CcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCC
Confidence 45544444422 1 1222322 1 1 12689999999988766432211 2
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 152 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 152 ~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+...+...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||.+..+.
T Consensus 110 l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~--~~~kl~dfg~~~~~~ 164 (273)
T cd05074 110 LPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNEN--MTVCVADFGLSKKIY 164 (273)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCC--CCEEECccccccccc
Confidence 33444444444433 778899999999999999999854 889999999988653
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.2e-09 Score=118.05 Aligned_cols=139 Identities=19% Similarity=0.183 Sum_probs=91.2
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||.|++|.||++..+ ++..|++|+........ .-+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~-------------------------------------~~~ 53 (280)
T cd05092 11 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA-------------------------------------RQD 53 (280)
T ss_pred cccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHH-------------------------------------HHH
Confidence 67999999999999742 46689999754321110 012
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-------------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA------------- 149 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~------------- 149 (864)
+.+|.+.+.++.+ +. +.+..... ....+++|||++|.+|.++.....
T Consensus 54 ~~~e~~~l~~l~h------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~ 115 (280)
T cd05092 54 FQREAELLTVLQH------------------QHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVA 115 (280)
T ss_pred HHHHHHHHhcCCC------------------CCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCC
Confidence 4455555554422 11 11112222 456789999999999987754221
Q ss_pred -cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 150 -FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 150 -~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..++...+...+.++. +..+|..|++|+|++|.||+++++ +.++|+|||++..+.
T Consensus 116 ~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~--~~~kL~dfg~~~~~~ 173 (280)
T cd05092 116 PGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQG--LVVKIGDFGMSRDIY 173 (280)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCC--CCEEECCCCceeEcC
Confidence 1133444444444433 678899999999999999999865 899999999987654
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.1e-09 Score=118.30 Aligned_cols=139 Identities=14% Similarity=0.149 Sum_probs=95.0
Q ss_pred cccccccceeeEEEEecC-----CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLVD-----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~-----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+-|++|++|.||+|...+ ++.|++|+.+........ -.+
T Consensus 12 ~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~------------------------------------~~~ 55 (280)
T cd05043 12 DLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQV------------------------------------TLL 55 (280)
T ss_pred eeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHH------------------------------------HHH
Confidence 669999999999999765 788999986643321110 113
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-----cCCceEEEeecCCcCCCChHHHhh-------cCCC
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEA-------FGVN 153 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLvmE~i~G~~L~~~~~~~~-------~~~~ 153 (864)
.+|+..+.++.+ ++ +.+++. ....++++||+++.+|.+...... ..+.
T Consensus 56 ~~e~~~l~~l~h------------------~n--i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~ 115 (280)
T cd05043 56 LQESCLLYGLSH------------------QN--ILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALS 115 (280)
T ss_pred HHHHHHHHhCCC------------------CC--CCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCC
Confidence 345555454422 11 222221 356789999999999988754322 1244
Q ss_pred HHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 154 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 154 ~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||+++.+.+
T Consensus 116 ~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~--~~~kl~d~g~~~~~~~ 169 (280)
T cd05043 116 TQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEE--LQVKITDNALSRDLFP 169 (280)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCC--CcEEECCCCCcccccC
Confidence 555555544444 788999999999999999999865 8999999999886643
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.2e-09 Score=121.24 Aligned_cols=139 Identities=16% Similarity=0.208 Sum_probs=88.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++|+.|++|.||+|+.+ +|+.||||+......... ..-++..|.
T Consensus 16 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------------~~~~~~~E~ 60 (328)
T cd07856 16 QPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPV-----------------------------------LAKRTYREL 60 (328)
T ss_pred EeecccCCeEEEEEEECCCCCEEEEEEecccccccc-----------------------------------hhHHHHHHH
Confidence 78999999999999976 899999997543211000 001123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+.++.+ ..-+.+...+. ....+++|||+. .+|.++.. ........+...+.+++
T Consensus 61 ~~l~~l~h-----------------pniv~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~--~~~~~~~~~~~~~~ql~~a 120 (328)
T cd07856 61 KLLKHLRH-----------------ENIISLSDIFISPLEDIYFVTELLG-TDLHRLLT--SRPLEKQFIQYFLYQILRG 120 (328)
T ss_pred HHHHhcCC-----------------CCeeeEeeeEecCCCcEEEEeehhc-cCHHHHHh--cCCCCHHHHHHHHHHHHHH
Confidence 44444432 11233333332 345789999985 46655432 22334333333333332
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++....
T Consensus 121 L~~LH~~~iiH~dl~p~Nili~~~--~~~~l~dfg~~~~~~ 159 (328)
T cd07856 121 LKYVHSAGVVHRDLKPSNILINEN--CDLKICDFGLARIQD 159 (328)
T ss_pred HHHHHhCCcccCCCCHHHEeECCC--CCEEeCccccccccC
Confidence 778999999999999999999865 899999999987554
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.6e-09 Score=120.17 Aligned_cols=137 Identities=16% Similarity=0.111 Sum_probs=88.4
Q ss_pred ccccc--cceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 12 PLATA--SIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 12 plasa--SigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
-||.| ++++||+|+.. +|+.||||+....-...- .. + .+.+|
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~--~~---------------------------~------~~~~e 49 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEE--HL---------------------------K------ALQNE 49 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHH--HH---------------------------H------HHHHH
Confidence 35556 99999999975 899999998764321100 00 0 12334
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~~ 165 (864)
+.-+..+. +++ +.+..++. ....+++|||+.|.++.++.... ..+.+...+...+.+++
T Consensus 50 ~~~~~~l~------------------h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~ 111 (328)
T cd08226 50 VVLSHFFR------------------HPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGAL 111 (328)
T ss_pred HHHHHhCC------------------CCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHH
Confidence 33333222 222 23333333 45678999999999998775422 12345554444444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
+..+|..|++|+|+||+||++..+ +.+++.|||.+.
T Consensus 112 ~aL~~lH~~~ivHrDlkp~Nill~~~--~~~~~~~~~~~~ 149 (328)
T cd08226 112 RGLNYLHQNGYIHRNIKASHILISGD--GLVSLSGLSHLY 149 (328)
T ss_pred HHHHHHHhCCeecCCCCHHHEEEeCC--CcEEEechHHHh
Confidence 778899999999999999999865 889999997643
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=98.99 E-value=5.2e-10 Score=124.39 Aligned_cols=140 Identities=16% Similarity=0.235 Sum_probs=88.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||+........ . ... .+..|.
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~-----~------------------------~~~------~~~~e~ 55 (334)
T cd07855 11 ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVP-----T------------------------LAK------RTLREL 55 (334)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEeccccccc-----c------------------------chH------HHHHHH
Confidence 67999999999999976 79999999865422110 0 000 012233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
..+.++.+.. -+.+..++. ....++||||+.| .|.++... ........+...+.++
T Consensus 56 ~~l~~l~h~~-----------------iv~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-~~~~~~~~~~~i~~qi 116 (334)
T cd07855 56 KILRHFKHDN-----------------IIAIRDILRPPGADFKDVYVVMDLMES-DLHHIIHS-DQPLTEEHIRYFLYQL 116 (334)
T ss_pred HHHHhcCCCC-----------------ccCHHHhccccCCCCceEEEEEehhhh-hHHHHhcc-CCCCCHHHHHHHHHHH
Confidence 3333332100 011111111 2345799999976 56554321 2234444444444443
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 117 ~~aL~~LH~~~ivH~dlkp~Nil~~~~--~~~kl~dfg~~~~~~ 158 (334)
T cd07855 117 LRGLKYIHSANVIHRDLKPSNLLVNED--CELRIGDFGMARGLS 158 (334)
T ss_pred HHHHHHHHHCCeecCCCCHHHEEEcCC--CcEEecccccceeec
Confidence 3 778899999999999999999865 899999999987654
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=8e-10 Score=129.85 Aligned_cols=79 Identities=19% Similarity=0.147 Sum_probs=52.1
Q ss_pred cCCceEEEeecCCcCCCChHHHhhc----CCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEec
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAF----GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDF 199 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~----~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDF 199 (864)
....+++||++.+. +.+....... ......+...+.+++ +..+|..||+|||+||.|||++.+ +.++|+||
T Consensus 235 ~~~~~lv~e~~~~~-l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~--~~vkL~DF 311 (501)
T PHA03210 235 EANTYMITQKYDFD-LYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCD--GKIVLGDF 311 (501)
T ss_pred CCeeEEEEeccccC-HHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC--CCEEEEeC
Confidence 45678999998653 3222111100 011122222233322 788999999999999999999865 89999999
Q ss_pred ccccccCh
Q 002927 200 GLTKKLSS 207 (864)
Q Consensus 200 G~~~~l~~ 207 (864)
|++..+..
T Consensus 312 Gla~~~~~ 319 (501)
T PHA03210 312 GTAMPFEK 319 (501)
T ss_pred CCceecCc
Confidence 99987654
|
|
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=98.99 E-value=1e-09 Score=116.54 Aligned_cols=142 Identities=15% Similarity=0.163 Sum_probs=91.6
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.++|++|++|.||+++.+ +|..||+|.....-... . .+-.+.+|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~---------------------------------~~~~~~~E 49 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV--K---------------------------------EKEASKKE 49 (257)
T ss_pred EEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc--h---------------------------------hhHHHHHH
Confidence 367999999999999986 78999999754310000 0 00012334
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhc-CCCHHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITR 163 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~-~~~~~~l~~~~~~ 163 (864)
+..++++++ ..+.+++ . ....+|+|||++|.+|.++...... ..+...+...+.+
T Consensus 50 ~~~l~~~~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
T cd08225 50 VILLAKMKH--------------------PNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQ 109 (257)
T ss_pred HHHHHhCCC--------------------CChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHH
Confidence 444444322 1112222 1 4557899999999999887543221 2344444444443
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+. +..+|..|++|+|++|.||+++++ +..++|+|||.+..+..
T Consensus 110 l~~~l~~lh~~~i~H~dl~~~nil~~~~-~~~~~l~d~~~~~~~~~ 154 (257)
T cd08225 110 ISLGLKHIHDRKILHRDIKSQNIFLSKN-GMVAKLGDFGIARQLND 154 (257)
T ss_pred HHHHHHHHHHCCcccccCCHHHEEEcCC-CCeEEecccccchhccC
Confidence 33 678899999999999999999864 23568999998876644
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.99 E-value=5.4e-10 Score=121.11 Aligned_cols=74 Identities=20% Similarity=0.443 Sum_probs=56.8
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....++||||.+-....++.. .++...+...+...+ +.++|..||+|||+||+|++.+.. .++-+|+|||++.
T Consensus 107 nd~v~ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~-t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 107 NDQVAIVLPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRR-TQRGVLVDFGLAQ 181 (418)
T ss_pred CCeeEEEecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccc-cCCceEEechhHH
Confidence 345578999998766666532 344555555555544 888999999999999999999875 5889999999987
Q ss_pred c
Q 002927 204 K 204 (864)
Q Consensus 204 ~ 204 (864)
.
T Consensus 182 ~ 182 (418)
T KOG1167|consen 182 R 182 (418)
T ss_pred H
Confidence 6
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.2e-09 Score=119.88 Aligned_cols=145 Identities=15% Similarity=0.167 Sum_probs=88.7
Q ss_pred cccccccceeeEEEEec---CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 11 TPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 11 ~plasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
+.|++|++|.||+|+.+ +|+.||||+.++..... +.+.. .+.+
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~----------------------------~~~~~------~~~~ 51 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQY----------------------------TGISQ------SACR 51 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccc----------------------------cCccH------HHHH
Confidence 45999999999999975 48999999877643100 00000 0223
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-c--CCceEEEeecCCcCCCChHHHhh----cCCCHHHHHHH
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEA----FGVNKQKVVEE 160 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLvmE~i~G~~L~~~~~~~~----~~~~~~~l~~~ 160 (864)
|+.-+.++.+. .-+.+...+. . ...+|||||+++. +.++..... ..+....+...
T Consensus 52 e~~~l~~l~h~-----------------~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~i 113 (316)
T cd07842 52 EIALLRELKHE-----------------NVVSLVEVFLEHADKSVYLLFDYAEHD-LWQIIKFHRQAKRVSIPPSMVKSL 113 (316)
T ss_pred HHHHHHhcCCC-----------------CccceEEEEeCCCCceEEEEEeCCCcC-HHHHHHhhccCCCcCcCHHHHHHH
Confidence 44444443221 1122333332 3 4578999999863 333321111 12334444444
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCC--CCceEEEecccccccCh
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP--PHRPILLDFGLTKKLSS 207 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~--~g~i~LiDFG~~~~l~~ 207 (864)
+.+++ +..+|..|++|+|++|.||+++.++ ++.++|+|||++..+..
T Consensus 114 ~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~ 164 (316)
T cd07842 114 LWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNA 164 (316)
T ss_pred HHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCC
Confidence 43433 7788999999999999999998611 38899999999886643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=98.98 E-value=7.6e-10 Score=122.62 Aligned_cols=77 Identities=16% Similarity=0.286 Sum_probs=56.4
Q ss_pred CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 128 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 128 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+++|||+++ +|.++.. ....++...+...+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++...
T Consensus 78 ~~~lv~e~~~~-~l~~~l~-~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~--~~~~L~dfg~~~~~ 153 (330)
T cd07834 78 DVYIVTELMET-DLHKVIK-SPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSN--CDLKICDFGLARGV 153 (330)
T ss_pred ceEEEecchhh-hHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--CCEEEcccCceEee
Confidence 45899999985 5555432 112344444444444433 678899999999999999999865 89999999999877
Q ss_pred ChH
Q 002927 206 SSS 208 (864)
Q Consensus 206 ~~~ 208 (864)
...
T Consensus 154 ~~~ 156 (330)
T cd07834 154 DPD 156 (330)
T ss_pred ccc
Confidence 654
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.2e-10 Score=115.01 Aligned_cols=157 Identities=16% Similarity=0.212 Sum_probs=104.0
Q ss_pred ccccccc-cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 4 MFMDFVE-TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 4 ~F~~fd~-~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
-|+..++ +-+|.|..+.|.|...+ +|.+.|+|+.--....... +-..++.+...+
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~-----------------------e~~~~~~EaT~~ 71 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESG-----------------------ETPYEMREATRQ 71 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCC-----------------------ccHHHHHHHHHH
Confidence 4555665 67899999999999876 8899999986432221100 012334444444
Q ss_pred hccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEec-CCceEEEeecCCcCCCChHHHhhcCCC---HHH
Q 002927 82 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQS-SETVLILEFMDGIRLNDCESLEAFGVN---KQK 156 (864)
Q Consensus 82 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~~-~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ 156 (864)
|++..+ ++. ++|. +.+-.+|.+ +-..||.|.++-+.|.|++... -.+. ...
T Consensus 72 Ev~ILR------qv~-----------------GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~-VtlSEK~tR~ 127 (411)
T KOG0599|consen 72 EISILR------QVM-----------------GHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSK-VTLSEKETRR 127 (411)
T ss_pred HHHHHH------Hhc-----------------CCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhh-eeecHHHHHH
Confidence 443322 221 2333 445566664 4467999999999999885421 1222 234
Q ss_pred HHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHH
Q 002927 157 VVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 210 (864)
Q Consensus 157 l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 210 (864)
+++.+.+. +..+|..+|+|||+||+|||++++ .+|+|.|||.++++.+..+
T Consensus 128 iMrqlfeg-VeylHa~~IVHRDLKpENILlddn--~~i~isDFGFa~~l~~Gek 178 (411)
T KOG0599|consen 128 IMRQLFEG-VEYLHARNIVHRDLKPENILLDDN--MNIKISDFGFACQLEPGEK 178 (411)
T ss_pred HHHHHHHH-HHHHHHhhhhhcccChhheeeccc--cceEEeccceeeccCCchh
Confidence 55555544 667899999999999999999865 8999999999999987544
|
|
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.5e-09 Score=118.45 Aligned_cols=79 Identities=19% Similarity=0.266 Sum_probs=55.0
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 202 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 202 (864)
....+++|||+++ .+.++........+...+...+.+++ +..+|. .|++|+|++|.||+++.+ +.++|+|||++
T Consensus 86 ~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~--~~~kL~dfg~~ 162 (296)
T cd06618 86 DSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDAS--GNVKLCDFGIS 162 (296)
T ss_pred CCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCC--CCEEECccccc
Confidence 4567899999865 45444332222344444444444433 677886 699999999999999854 89999999998
Q ss_pred cccCh
Q 002927 203 KKLSS 207 (864)
Q Consensus 203 ~~l~~ 207 (864)
..+..
T Consensus 163 ~~~~~ 167 (296)
T cd06618 163 GRLVD 167 (296)
T ss_pred hhccC
Confidence 76643
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=98.98 E-value=1e-09 Score=122.46 Aligned_cols=75 Identities=16% Similarity=0.250 Sum_probs=53.7
Q ss_pred CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 128 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 128 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+++|||+++ +|.+.. ....+....+...+.+++ +..+|..|++|+|+||+||+++.+ ++.++|+|||++..+
T Consensus 90 ~~~lv~e~~~~-~L~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~-~~~~kl~dfg~~~~~ 165 (342)
T cd07854 90 SVYIVQEYMET-DLANVL--EQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTE-DLVLKIGDFGLARIV 165 (342)
T ss_pred eEEEEeecccc-cHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCC-CceEEECCcccceec
Confidence 35799999985 554442 222344444444444433 778899999999999999999754 367899999998766
Q ss_pred C
Q 002927 206 S 206 (864)
Q Consensus 206 ~ 206 (864)
.
T Consensus 166 ~ 166 (342)
T cd07854 166 D 166 (342)
T ss_pred C
Confidence 4
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.8e-10 Score=129.62 Aligned_cols=144 Identities=19% Similarity=0.205 Sum_probs=108.5
Q ss_pred ccccccccceeeEEEEec-CC---CEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 10 ETPLATASIAQVHRATLV-DG---RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G---~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
++.||+|.||.|++|+|+ .| ..||||.++-|..+..+ .||
T Consensus 634 e~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gytekqr------------------------------------rdF 677 (996)
T KOG0196|consen 634 EKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQR------------------------------------RDF 677 (996)
T ss_pred EEEEecccccceecccccCCCCcceeEEEeeeccCccHHHH------------------------------------hhh
Confidence 478999999999999997 34 57999999988876543 347
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHH--HH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE--EI 161 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~--~~ 161 (864)
..||.-+-+|.| ++ +++--|.- +..-.++.||++.++|+.+++....++..-++.. +.
T Consensus 678 L~EAsIMGQFdH------------------PNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrG 739 (996)
T KOG0196|consen 678 LSEASIMGQFDH------------------PNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRG 739 (996)
T ss_pred hhhhhhcccCCC------------------CcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHH
Confidence 778877666532 33 33444444 4556689999999999999876655555444443 34
Q ss_pred HHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 162 TRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 162 ~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
+.+-++.+-..|+|||||-.-||||+.+ -.-++.|||+++.+.++.
T Consensus 740 IAsGMkYLsdm~YVHRDLAARNILVNsn--LvCKVsDFGLSRvledd~ 785 (996)
T KOG0196|consen 740 IASGMKYLSDMNYVHRDLAARNILVNSN--LVCKVSDFGLSRVLEDDP 785 (996)
T ss_pred HHHHhHHHhhcCchhhhhhhhheeeccc--eEEEeccccceeecccCC
Confidence 4455888889999999999999999854 556799999999886554
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.1e-10 Score=112.49 Aligned_cols=143 Identities=15% Similarity=0.243 Sum_probs=95.2
Q ss_pred cccccccceeeEEEEe-cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-+|.|-++.|+.|.. .+.+.++||+++|--.+.+.++++||+.+.. .-++..+++
T Consensus 44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~g-------g~NIi~L~D---------------- 100 (338)
T KOG0668|consen 44 RKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRG-------GPNIIKLLD---------------- 100 (338)
T ss_pred HHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccC-------CCCeeehhh----------------
Confidence 5689999999999995 4789999999999999888888887765531 011111110
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQI 169 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~i 169 (864)
... ++. +....|+.||++......+-.. -...|..--...++.+ +..+
T Consensus 101 --------iV~--------------Dp~--------SktpaLiFE~v~n~Dfk~ly~t-l~d~dIryY~~elLkA-LdyC 148 (338)
T KOG0668|consen 101 --------IVK--------------DPE--------SKTPSLIFEYVNNTDFKQLYPT-LTDYDIRYYIYELLKA-LDYC 148 (338)
T ss_pred --------hhc--------------Ccc--------ccCchhHhhhhccccHHHHhhh-hchhhHHHHHHHHHHH-HhHH
Confidence 000 111 3334589999987655443211 1112222222233322 7778
Q ss_pred HhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 170 YVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 170 ~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
|+.||+|||.||-|+|++.. ..++.|||||++-...+..
T Consensus 149 HS~GImHRDVKPhNvmIdh~-~rkLrlIDWGLAEFYHp~~ 187 (338)
T KOG0668|consen 149 HSMGIMHRDVKPHNVMIDHE-LRKLRLIDWGLAEFYHPGK 187 (338)
T ss_pred HhcCcccccCCcceeeechh-hceeeeeecchHhhcCCCc
Confidence 99999999999999999975 4789999999987766543
|
|
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.3e-09 Score=121.40 Aligned_cols=76 Identities=18% Similarity=0.293 Sum_probs=55.1
Q ss_pred CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 128 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 128 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+|+|||+.| .|.++.. ....+....+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++...
T Consensus 83 ~~~lv~e~~~~-~L~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~--~~~kL~Dfg~~~~~ 158 (337)
T cd07858 83 DVYIVYELMDT-DLHQIIR-SSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN--CDLKICDFGLARTT 158 (337)
T ss_pred cEEEEEeCCCC-CHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC--CCEEECcCcccccc
Confidence 46899999975 5544432 122344554444444443 778999999999999999999865 89999999998766
Q ss_pred Ch
Q 002927 206 SS 207 (864)
Q Consensus 206 ~~ 207 (864)
..
T Consensus 159 ~~ 160 (337)
T cd07858 159 SE 160 (337)
T ss_pred CC
Confidence 43
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.7e-09 Score=114.86 Aligned_cols=78 Identities=18% Similarity=0.243 Sum_probs=58.9
Q ss_pred CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 127 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
...++||||+++ +|.++........+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..
T Consensus 71 ~~~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~--~~~~l~d~g~~~~ 147 (282)
T cd07829 71 RKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRD--GVLKLADFGLARA 147 (282)
T ss_pred CceEEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCC--CCEEEecCCcccc
Confidence 456899999986 77776543222455555555444443 788999999999999999999865 8999999999876
Q ss_pred cCh
Q 002927 205 LSS 207 (864)
Q Consensus 205 l~~ 207 (864)
+..
T Consensus 148 ~~~ 150 (282)
T cd07829 148 FGI 150 (282)
T ss_pred cCC
Confidence 644
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.2e-09 Score=119.50 Aligned_cols=140 Identities=20% Similarity=0.201 Sum_probs=88.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|++|++|.||+|+.. +|+.||||.........- ....+.+|+
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~-----------------------------------~~~~~~~E~ 57 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNAT-----------------------------------DAQRTFREI 57 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcch-----------------------------------hhhhhhHHH
Confidence 67999999999999976 789999997643211000 000133455
Q ss_pred HHHHHH-HHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIV-SANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~-~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++ .+. .-+.+..++. ....+|||||++| +|.+... ....+.......+.+++
T Consensus 58 ~~l~~l~~h~-----------------ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~--~~~~~~~~~~~i~~qi~ 117 (337)
T cd07852 58 MFLQELGDHP-----------------NIVKLLNVIKAENDKDIYLVFEYMET-DLHAVIR--ANILEDVHKRYIMYQLL 117 (337)
T ss_pred HHHHHhcCCC-----------------CccceeeeeccCCCceEEEEeccccc-CHHHHHh--cCCCCHHHHHHHHHHHH
Confidence 555555 220 0122222222 1235899999986 6655432 22334333333333332
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 118 ~~L~~LH~~~i~H~dl~p~nill~~~--~~~kl~d~g~~~~~~~ 159 (337)
T cd07852 118 KALKYIHSGNVIHRDLKPSNILLNSD--CRVKLADFGLARSLSE 159 (337)
T ss_pred HHHHHHHHCCeecCCCCHHHEEEcCC--CcEEEeeccchhcccc
Confidence 678899999999999999999865 8999999999886643
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.3e-09 Score=113.65 Aligned_cols=79 Identities=23% Similarity=0.361 Sum_probs=61.8
Q ss_pred CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 127 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
...+++|||+++.+|.++..... ..+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||.+..
T Consensus 60 ~~~~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~--~~~~l~d~~~~~~ 136 (244)
T smart00220 60 DKLYLVMEYCDGGDLFDLLKKRG-RLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDED--GHVKLADFGLARQ 136 (244)
T ss_pred CEEEEEEeCCCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCC--CcEEEccccceee
Confidence 56789999999999988754322 245555555554443 778899999999999999999865 8999999999988
Q ss_pred cChH
Q 002927 205 LSSS 208 (864)
Q Consensus 205 l~~~ 208 (864)
+...
T Consensus 137 ~~~~ 140 (244)
T smart00220 137 LDPG 140 (244)
T ss_pred eccc
Confidence 7654
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.9e-10 Score=116.32 Aligned_cols=75 Identities=21% Similarity=0.332 Sum_probs=52.8
Q ss_pred CCceEEEeecCCcCCCChHHHhh---cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccc
Q 002927 127 SETVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGL 201 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~---~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~ 201 (864)
...+|||.+|+ .|+..+-. ..+....+-+.+-.+. +..||+..++|||+||.|+||+.+ |.++|.|||+
T Consensus 97 ~t~ylVf~~ce----hDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~d--gilklADFGl 170 (376)
T KOG0669|consen 97 ATFYLVFDFCE----HDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKD--GILKLADFGL 170 (376)
T ss_pred ceeeeeHHHhh----hhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCC--ceEEeecccc
Confidence 34689999998 34432211 1233333333332222 778999999999999999999966 8999999999
Q ss_pred ccccCh
Q 002927 202 TKKLSS 207 (864)
Q Consensus 202 ~~~l~~ 207 (864)
++.++.
T Consensus 171 ar~fs~ 176 (376)
T KOG0669|consen 171 ARAFST 176 (376)
T ss_pred ccceec
Confidence 987764
|
|
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.8e-10 Score=127.24 Aligned_cols=81 Identities=17% Similarity=0.222 Sum_probs=61.3
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
.++.++..|||.|+.++.+.-.-..++...++--.+-+.+ |..+|...|||||||.||||++-+ |.|.|.|||.+.
T Consensus 101 enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tld--GdirLADFGVSA 178 (1187)
T KOG0579|consen 101 ENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLD--GDIRLADFGVSA 178 (1187)
T ss_pred cCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEec--CcEeeecccccc
Confidence 6677899999999999877543334444444433333333 778899999999999999999976 899999999887
Q ss_pred ccChH
Q 002927 204 KLSSS 208 (864)
Q Consensus 204 ~l~~~ 208 (864)
....+
T Consensus 179 Kn~~t 183 (1187)
T KOG0579|consen 179 KNKST 183 (1187)
T ss_pred cchhH
Confidence 66543
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.91 E-value=6.4e-10 Score=134.12 Aligned_cols=141 Identities=15% Similarity=0.129 Sum_probs=90.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEec--CChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQH--QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~--p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
.-||.|-||+||-|... +|+-.|||-.+ |+..+ .+.. ...
T Consensus 1241 ~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k---------------------------~~~~----------i~e 1283 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHK---------------------------TFKL----------IAE 1283 (1509)
T ss_pred cccCCcceeeeEEeecCCccchhhhhhhhcCccccc---------------------------cCcc----------hHH
Confidence 45899999999999965 79999999322 11100 0000 123
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH---HH
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT---RA 164 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~---~~ 164 (864)
|.+.++.+.|... -.+..|.|. ..+-+|-||||+|++|+++.... +...+.+.+... -.
T Consensus 1284 Em~vlE~lnHpNl------------V~YyGVEvH----Rekv~IFMEyC~~GsLa~ll~~g--ri~dE~vt~vyt~qll~ 1345 (1509)
T KOG4645|consen 1284 EMKVLEGLNHPNL------------VRYYGVEVH----REKVYIFMEYCEGGSLASLLEHG--RIEDEMVTRVYTKQLLE 1345 (1509)
T ss_pred HHHHHHhccCccc------------cccCceeec----HHHHHHHHHHhccCcHHHHHHhc--chhhhhHHHHHHHHHHH
Confidence 5556666544210 001111111 45567899999999999985432 222222222211 12
Q ss_pred HHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 165 YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 165 ~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
-+..+|++|||||||||.||+++.. |-|++.|||++..+...
T Consensus 1346 gla~LH~~gIVHRDIK~aNI~Ld~~--g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1346 GLAYLHEHGIVHRDIKPANILLDFN--GLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred HHHHHHhcCceecCCCccceeeecC--CcEEeecccceeEecCc
Confidence 2667899999999999999999965 89999999999988765
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.7e-09 Score=115.76 Aligned_cols=144 Identities=19% Similarity=0.259 Sum_probs=86.0
Q ss_pred ccccccceeeEEEEec-CCCEEEEEEecCCh--HHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 12 PLATASIAQVHRATLV-DGRQVVVKVQHQGI--KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 12 plasaSigqV~~A~l~-~G~~VAVKv~~p~i--~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
-.|.|-|+.|.+|+.. -|+.|||||.|-+= .+.-..++++|+++... |-..-
T Consensus 439 ~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~A-------------------------D~Edk 493 (752)
T KOG0670|consen 439 YTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDA-------------------------DPEDK 493 (752)
T ss_pred ccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhcc-------------------------Cchhh
Confidence 3689999999999965 68999999987542 22223455655554221 11111
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcC----CCHHHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFG----VNKQKVVEEITRA 164 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~----~~~~~l~~~~~~~ 164 (864)
-..+.-|++ |.. ....+||.|-+ ...|.+++ .+.| +....+-...-++
T Consensus 494 ~Hclrl~r~-F~h------------------------knHLClVFE~L-slNLRevL--KKyG~nvGL~ikaVRsYaqQL 545 (752)
T KOG0670|consen 494 FHCLRLFRH-FKH------------------------KNHLCLVFEPL-SLNLREVL--KKYGRNVGLHIKAVRSYAQQL 545 (752)
T ss_pred hHHHHHHHH-hhh------------------------cceeEEEehhh-hchHHHHH--HHhCcccceeehHHHHHHHHH
Confidence 112223333 221 23346787765 24444443 3333 2222222222222
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
| |+.+-..||+|||+||.||||++. ...++|||||.+...++.+
T Consensus 546 flALklLK~c~vlHaDIKPDNiLVNE~-k~iLKLCDfGSA~~~~ene 591 (752)
T KOG0670|consen 546 FLALKLLKKCGVLHADIKPDNILVNES-KNILKLCDFGSASFASENE 591 (752)
T ss_pred HHHHHHHHhcCeeecccCccceEeccC-cceeeeccCcccccccccc
Confidence 2 555557899999999999999974 4678999999998887654
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=98.91 E-value=5.6e-09 Score=114.74 Aligned_cols=79 Identities=15% Similarity=0.166 Sum_probs=59.8
Q ss_pred cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 202 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 202 (864)
....+++|||++|.+|.++.... ..+.+...+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|.|||.+
T Consensus 71 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~--~~~kl~d~~~~ 148 (314)
T cd08216 71 DSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGD--GKVVLSGLRYS 148 (314)
T ss_pred CCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecC--CceEEecCccc
Confidence 45578999999999998875432 12344444444444433 778899999999999999999865 89999999988
Q ss_pred cccC
Q 002927 203 KKLS 206 (864)
Q Consensus 203 ~~l~ 206 (864)
..+.
T Consensus 149 ~~~~ 152 (314)
T cd08216 149 VSMI 152 (314)
T ss_pred eeec
Confidence 7654
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.90 E-value=3.2e-09 Score=116.40 Aligned_cols=142 Identities=22% Similarity=0.191 Sum_probs=94.4
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+-+|+|.||.||+|.+ +++.|||||..+.-.+....+-+|.+. | ..+-.
T Consensus 216 eli~~Grfg~V~KaqL-~~~~VAVKifp~~~kqs~~~Ek~Iy~l---------p---------------------~m~h~ 264 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQL-DNRLVAVKIFPEQEKQSFQNEKNIYSL---------P---------------------GMKHE 264 (534)
T ss_pred HHhhcCccceeehhhc-cCceeEEEecCHHHHHHHHhHHHHHhc---------c---------------------Cccch
Confidence 5689999999999998 569999999776555544444332111 1 11233
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHH---HHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQK---VVEEITRAYAH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~---l~~~~~~~~l~ 167 (864)
|+.+|-..=+ ..+.. ..+..||+||-+-++|.+++. ..-++-.. +++.+++- +.
T Consensus 265 nIl~Fi~~ek------------------r~t~~--~~eywLVt~fh~kGsL~dyL~--~ntisw~~~cria~SmarG-La 321 (534)
T KOG3653|consen 265 NILQFIGAEK------------------RGTAD--RMEYWLVTEFHPKGSLCDYLK--ANTISWNSLCRIAESMARG-LA 321 (534)
T ss_pred hHHHhhchhc------------------cCCcc--ccceeEEeeeccCCcHHHHHH--hccccHHHHHHHHHHHHHH-HH
Confidence 4444422100 00000 125679999999999999854 44455444 44444443 55
Q ss_pred HHHh---------cCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 168 QIYV---------DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 168 ~i~~---------~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
.+|+ -.|.|||+|.-||||..| +.-+|.|||++.++++.
T Consensus 322 ~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~D--lTccIaDFGLAl~~~p~ 369 (534)
T KOG3653|consen 322 HLHEELPRGDHHKPPIAHRDLKSKNVLVKND--LTCCIADFGLALRLEPG 369 (534)
T ss_pred HhcccCCcCCCCCCccccccccccceEEccC--CcEEeeccceeEEecCC
Confidence 6664 579999999999999976 89999999999998754
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.3e-08 Score=105.65 Aligned_cols=145 Identities=21% Similarity=0.258 Sum_probs=90.2
Q ss_pred cccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 9 VETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 9 d~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+-+|++.|..++||+.+..+|+.++||+.+++.... ...++.+|
T Consensus 2 ~~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~------------------------------------~~~~~~~E 45 (223)
T cd05154 2 EVRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLP------------------------------------SAHDVARE 45 (223)
T ss_pred cceecCCCccceEEEEEecCCcceEEEeCCCcccCc------------------------------------ccccHHHH
Confidence 448999999999999998777999999865432100 11235667
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cC-----CceEEEeecCCcCCCChHH--------H----hh
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SS-----ETVLILEFMDGIRLNDCES--------L----EA 149 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~-----~~vLvmE~i~G~~L~~~~~--------~----~~ 149 (864)
++.++.+++. .+.+|+++. .. ..+++|||++|.++.+... . ..
T Consensus 46 ~~~~~~l~~~------------------~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~~~~~~~~~~~i~~~ 107 (223)
T cd05154 46 YRVLRALAGT------------------GVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLRPELSPEERRALARA 107 (223)
T ss_pred HHHHHHhhCC------------------CCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCCCCCCHHHHHHHHHH
Confidence 7777776541 355787765 22 4589999999998876431 0 00
Q ss_pred --------cCCCH----------------HHHHH---HH----------HHHHHHHH-------HhcCeeccCCCCCCeE
Q 002927 150 --------FGVNK----------------QKVVE---EI----------TRAYAHQI-------YVDGFFNGDPHPGNFL 185 (864)
Q Consensus 150 --------~~~~~----------------~~l~~---~~----------~~~~l~~i-------~~~G~~H~D~hPgNIl 185 (864)
+..+. ..+.. .+ +...++.+ ....++|+|+||+||+
T Consensus 108 i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil 187 (223)
T cd05154 108 LADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVL 187 (223)
T ss_pred HHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEE
Confidence 00000 00000 00 00011111 1468999999999999
Q ss_pred EccCCCCceEEEecccccccCh
Q 002927 186 VSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 186 v~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++.+.++.+.||||+.++.-++
T Consensus 188 ~~~~~~~~~~iID~e~~~~g~~ 209 (223)
T cd05154 188 FHPDEPRVVAVLDWELATLGDP 209 (223)
T ss_pred EcCCCCcEEEEEeccccccCCh
Confidence 9863135688999998886544
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.86 E-value=3.1e-09 Score=120.80 Aligned_cols=85 Identities=21% Similarity=0.249 Sum_probs=59.8
Q ss_pred eeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH--HHHHHHhcCeeccCCCCCCeEEccCCCCceEEE
Q 002927 121 PEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA--YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILL 197 (864)
Q Consensus 121 P~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~--~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~Li 197 (864)
-.++. ....++|||.+.|.-+-+...... ....+....+.++ .+..+|++|+||||+||+|||+.. ..|.|.|+
T Consensus 382 ~~v~~~~~~~~~v~e~l~g~ell~ri~~~~--~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~-~~g~lrlt 458 (612)
T KOG0603|consen 382 HDVYEDGKEIYLVMELLDGGELLRRIRSKP--EFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDG-SAGHLRLT 458 (612)
T ss_pred cceecCCceeeeeehhccccHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecC-CCCcEEEE
Confidence 34444 456789999999987766533222 1212232233332 388899999999999999999952 24899999
Q ss_pred ecccccccChH
Q 002927 198 DFGLTKKLSSS 208 (864)
Q Consensus 198 DFG~~~~l~~~ 208 (864)
|||..+.+.++
T Consensus 459 yFG~a~~~~~~ 469 (612)
T KOG0603|consen 459 YFGFWSELERS 469 (612)
T ss_pred EechhhhCchh
Confidence 99999998876
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.85 E-value=4.3e-09 Score=122.33 Aligned_cols=137 Identities=24% Similarity=0.319 Sum_probs=90.5
Q ss_pred cccccccccee-eEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQ-VHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigq-V~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
++-+|.|+-|. ||+|.. +||+||||- ++.++.....+|++..+|
T Consensus 514 ~eilG~Gs~Gt~Vf~G~y-e~R~VAVKr----------------------------------ll~e~~~~A~rEi~lL~e 558 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVY-EGREVAVKR----------------------------------LLEEFFDFAQREIQLLQE 558 (903)
T ss_pred HHHcccCCCCcEEEEEee-CCceehHHH----------------------------------HhhHhHHHHHHHHHHHHh
Confidence 46677888876 599997 799999991 233444444455555544
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHh-----hcC-CCHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE-----AFG-VNKQKVV 158 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~-----~~~-~~~~~l~ 158 (864)
.. .+-.|-+.|. ..-.|++.|.|. .+|+|+.... ..+ +++..+.
T Consensus 559 SD-------------------------~H~NviRyyc~E~d~qF~YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l 612 (903)
T KOG1027|consen 559 SD-------------------------EHPNVIRYYCSEQDRQFLYIALELCA-CSLQDLIESSGLDVEMQSDIDPISVL 612 (903)
T ss_pred cc-------------------------CCCceEEEEeeccCCceEEEEehHhh-hhHHHHHhccccchhhcccccHHHHH
Confidence 31 1223334443 233689999995 6777765431 111 3344444
Q ss_pred HHHHHHHHHHHHhcCeeccCCCCCCeEEcc---CCCCceEEEecccccccChH
Q 002927 159 EEITRAYAHQIYVDGFFNGDPHPGNFLVSK---DPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 159 ~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~---~~~g~i~LiDFG~~~~l~~~ 208 (864)
..++.. +.++|..+++|||+||.||||.. +...+++|.|||+++++...
T Consensus 613 ~q~~~G-laHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~ 664 (903)
T KOG1027|consen 613 SQIASG-LAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGG 664 (903)
T ss_pred HHHHHH-HHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCC
Confidence 444443 77899999999999999999985 32356889999999999764
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.5e-09 Score=112.81 Aligned_cols=77 Identities=17% Similarity=0.237 Sum_probs=57.1
Q ss_pred cCCceEEEeecCCcCCCChHHH---hhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecc
Q 002927 126 SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFG 200 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~---~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG 200 (864)
....+++|||++|.+|.++... .....+...+...+.++. +..+|+.|++|+|++|.||+++. +.++|+|||
T Consensus 74 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~---~~~~l~d~g 150 (260)
T cd08222 74 RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN---NLLKIGDFG 150 (260)
T ss_pred CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec---CCEeecccC
Confidence 3456899999999999876532 112344554444444443 67899999999999999999974 579999999
Q ss_pred ccccc
Q 002927 201 LTKKL 205 (864)
Q Consensus 201 ~~~~l 205 (864)
.+..+
T Consensus 151 ~~~~~ 155 (260)
T cd08222 151 VSRLL 155 (260)
T ss_pred ceeec
Confidence 87665
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=4.4e-08 Score=104.94 Aligned_cols=100 Identities=12% Similarity=0.098 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE--e-------cCCceEEEeecCCc-CCCChHHHh-hcCCC
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI--Q-------SSETVLILEFMDGI-RLNDCESLE-AFGVN 153 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~--~-------~~~~vLvmE~i~G~-~L~~~~~~~-~~~~~ 153 (864)
+.+|.+++.++.+. ++.+|++. . ..+.+||||+++|. +|.++.... ....+
T Consensus 75 a~rE~~~l~~L~~~------------------GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~ 136 (268)
T PRK15123 75 ADREWRAIHRLHEV------------------GVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPD 136 (268)
T ss_pred HHHHHHHHHHHHHc------------------CCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCC
Confidence 56789999999763 46677663 2 12478999999996 787774311 11122
Q ss_pred ---HHHHHHHHHHHHHHHHHhcCeeccCCCCCCeEEcc-----CCCCceEEEeccccc
Q 002927 154 ---KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSK-----DPPHRPILLDFGLTK 203 (864)
Q Consensus 154 ---~~~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~-----~~~g~i~LiDFG~~~ 203 (864)
...+++.+.. ++.++|..|++|+|++|+|||++. +++.++.||||+.+.
T Consensus 137 ~~~~~~ll~~la~-~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 137 PRLKRMLIKRVAT-MVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred HHHHHHHHHHHHH-HHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 1234444333 377899999999999999999984 224689999999884
|
|
| >KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.8e-08 Score=106.67 Aligned_cols=186 Identities=16% Similarity=0.199 Sum_probs=126.8
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHh--hCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAW--AEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~--~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
-.|..|--+-||.|+-.+|+.+||||-+-.|.-.-.+|-- +-.-+++ .....++..++.-|++. |
T Consensus 150 GCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRY----V~GEfRFRhgyck~NPRKMVk~WAEK---------E 216 (520)
T KOG2270|consen 150 GCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRY----VSGEFRFRHGYCKHNPRKMVKTWAEK---------E 216 (520)
T ss_pred cccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhh----ccceeeeecccccCCcHHHHHHHHHH---------H
Confidence 3577888899999998899999999977555322222211 1100111 11335677788877764 9
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCH---HHHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNK---QKVVEEITRAY 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~---~~l~~~~~~~~ 165 (864)
.+|+.|++.. ++.+|+++.-..+||||+||.+.... ...+....+.+ ..+...+++.+
T Consensus 217 ~RNLkRl~~a------------------GIP~PePIlLk~hVLVM~FlGrdgw~-aPkLKd~~ls~~ka~~~Y~~~v~~M 277 (520)
T KOG2270|consen 217 MRNLKRLNNA------------------GIPCPEPILLKNHVLVMEFLGRDGWA-APKLKDASLSTSKARELYQQCVRIM 277 (520)
T ss_pred HHHHHHHHhc------------------CCCCCCceeeecceEeeeeccCCCCc-CcccccccCChHHHHHHHHHHHHHH
Confidence 9999999752 58889988888899999999542211 11122222332 33444444443
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHHcCCC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 238 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~G~~ 238 (864)
-.+....++||+||.--|+|+- +|++++||-+.+...+......| +..|...+-..|.++|+.
T Consensus 278 R~lY~~c~LVHADLSEfN~Lyh---dG~lyiIDVSQSVE~DHP~aldF-------LRmDc~NVn~FF~r~gv~ 340 (520)
T KOG2270|consen 278 RRLYQKCRLVHADLSEFNLLYH---DGKLYIIDVSQSVEHDHPHALDF-------LRMDCNNVNDFFRRLGVA 340 (520)
T ss_pred HHHHHHhceeccchhhhhheEE---CCEEEEEEccccccCCChhHHHH-------HHHHHHHHHHHHHHcCCe
Confidence 3334578999999999999996 38999999999988877655444 456778888999999984
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.82 E-value=3e-09 Score=111.16 Aligned_cols=145 Identities=18% Similarity=0.185 Sum_probs=95.2
Q ss_pred ccccc-cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 6 MDFVE-TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 6 ~~fd~-~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
++||- +.||.|.||.|-.++-+ +|+-+|+||++..+- +..|- +++
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKevi--iakdE-----VAH-------------------------- 214 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVI--IAKDE-----VAH-------------------------- 214 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhhe--eehHH-----hhh--------------------------
Confidence 45664 78999999999999977 899999998775432 11110 011
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeE-Ee-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHH
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV-IQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEE 160 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v-~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~ 160 (864)
-..|-+.+...+|.|-. --+. +. ..+.+.||||..|+.|.-.+..+ -...++.++.-.
T Consensus 215 -TlTE~RVL~~~~HPFLt------------------~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGa 275 (516)
T KOG0690|consen 215 -TLTENRVLQNCRHPFLT------------------SLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGA 275 (516)
T ss_pred -hhhHHHHHHhccCcHHH------------------HhhhhhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhH
Confidence 11244455544443210 0000 01 34457999999999887543321 122234444443
Q ss_pred HHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 161 ITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 161 ~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
-+-..+..+|..+|+.||+|-+|+|++.| |.|+|.|||++++
T Consensus 276 EIvsAL~YLHs~~ivYRDlKLENLlLDkD--GHIKitDFGLCKE 317 (516)
T KOG0690|consen 276 EIVSALGYLHSRNIVYRDLKLENLLLDKD--GHIKITDFGLCKE 317 (516)
T ss_pred HHHHHhhhhhhCCeeeeechhhhheeccC--CceEeeecccchh
Confidence 34445889999999999999999999976 9999999999974
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.3e-08 Score=110.02 Aligned_cols=148 Identities=19% Similarity=0.247 Sum_probs=88.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.-||.|+|+.||+|-.- ..+-|||||-.-+-. .+ +| .--+|...|
T Consensus 469 hLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~------Wr----------------------dE------KKeNYhKHA 514 (775)
T KOG1151|consen 469 HLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKN------WR----------------------DE------KKENYHKHA 514 (775)
T ss_pred HHhccccHHHHHHhcccchhheeeEeeehhccc------hh----------------------hH------hhhhHHHHH
Confidence 34899999999999954 678999998542211 10 00 001122222
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
-.-.++...+ + +..|-+.|. +...+-|+|||+|-+|+-+++..+ -...++.-..+.++
T Consensus 515 cREyrIHKeL--------------D--HpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhk-lmSEKEARSIiMQi 577 (775)
T KOG1151|consen 515 CREYRIHKEL--------------D--HPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHK-LMSEKEARSIIMQI 577 (775)
T ss_pred HHHHhhhhcc--------------C--cceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhh-hhhHHHHHHHHHHH
Confidence 2222222221 1 234445553 456789999999999987654222 12222222222222
Q ss_pred H--HHHHH--hcCeeccCCCCCCeEEccC-CCCceEEEecccccccChHH
Q 002927 165 Y--AHQIY--VDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 165 ~--l~~i~--~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~~~ 209 (864)
+ +..+- .--|||-||||||||+-.. ..|.|+|.|||+++.++++.
T Consensus 578 VnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddS 627 (775)
T KOG1151|consen 578 VNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDS 627 (775)
T ss_pred HHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCc
Confidence 2 33433 4679999999999998532 23789999999999877653
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.6e-09 Score=113.55 Aligned_cols=143 Identities=13% Similarity=0.116 Sum_probs=84.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
..||.||||.|-.|..+ +.+.+||||++.++--+ ..|++.--.-.+.+.. +. ..
T Consensus 355 ~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQ-dDDvectm~EKrvLAL--~~-kp--------------------- 409 (683)
T KOG0696|consen 355 MVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQ-DDDVECTMVEKRVLAL--PG-KP--------------------- 409 (683)
T ss_pred EEeccCccceeeeecccCcchhhhhhhhccceeee-cCcccceehhhhheec--CC-CC---------------------
Confidence 67999999999999977 67889999988765321 1122110000000000 00 00
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHH-HhhcCCCHHHHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCES-LEAFGVNKQKVVEEITRAYAHQ 168 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~-~~~~~~~~~~l~~~~~~~~l~~ 168 (864)
--+..+...|+. -.+.+.||||+.|+.|--... ..+.......+...-+.+-+-.
T Consensus 410 pFL~qlHScFQT------------------------mDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFF 465 (683)
T KOG0696|consen 410 PFLVQLHSCFQT------------------------MDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFF 465 (683)
T ss_pred chHHHHHHHhhh------------------------hhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhh
Confidence 011122222220 134579999999998864432 1111111112222222233567
Q ss_pred HHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 169 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 169 i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+|..||+.||||-.|||++.+ |.|+|.||||+++
T Consensus 466 Lh~kgIiYRDLKLDNvmLd~e--GHiKi~DFGmcKE 499 (683)
T KOG0696|consen 466 LHSKGIIYRDLKLDNVMLDSE--GHIKIADFGMCKE 499 (683)
T ss_pred hhcCCeeeeeccccceEeccC--CceEeeecccccc
Confidence 899999999999999999976 9999999999874
|
|
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.2e-08 Score=115.81 Aligned_cols=141 Identities=14% Similarity=0.077 Sum_probs=93.7
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.-.+|.|.+|.||.|+.. +...+|||-.. +.- .++..-+++|+.+...
T Consensus 580 rvVLGKGTYG~VYA~RD~~tqvrIaIKEIp----ekd---------------------------sr~~QPLhEEIaLH~~ 628 (1226)
T KOG4279|consen 580 RVVLGKGTYGTVYAARDMDTQVRIAIKEIP----EKD---------------------------SREVQPLHEEIALHST 628 (1226)
T ss_pred eEEeecCceeEEEeeccccceeEEEeeecc----ccc---------------------------chhhccHHHHHHHHHH
Confidence 358999999999999976 56678999422 111 1222334566666655
Q ss_pred HH--HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCC--CHHHHHHHHHHH
Q 002927 89 AE--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGV--NKQKVVEEITRA 164 (864)
Q Consensus 89 a~--n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~--~~~~l~~~~~~~ 164 (864)
.+ |+.++-..+.. .+-.-+-||-++|++|+++++..=..+ +...+.-..-++
T Consensus 629 LrHkNIVrYLGs~se------------------------nGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQI 684 (1226)
T KOG4279|consen 629 LRHKNIVRYLGSVSE------------------------NGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQI 684 (1226)
T ss_pred HhhHhHHHHhhccCC------------------------CCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHH
Confidence 54 45554443221 111237899999999999865332222 233333333333
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+ ++.+|+..|||||+|-.|+||+.- .|-++|.|||-++++.
T Consensus 685 LeGLkYLHen~IVHRDIKGDNVLvNTy-SGvlKISDFGTsKRLA 727 (1226)
T KOG4279|consen 685 LEGLKYLHENKIVHRDIKGDNVLVNTY-SGVLKISDFGTSKRLA 727 (1226)
T ss_pred HHHhhhhhhcceeeccccCCcEEEeec-cceEEecccccchhhc
Confidence 3 788899999999999999999864 4889999999988764
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.79 E-value=3.5e-09 Score=109.89 Aligned_cols=140 Identities=18% Similarity=0.178 Sum_probs=93.3
Q ss_pred ccccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 8 FVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 8 fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+..+.||.|--|.|-.+..+ +|+..|+||++-.-+.+ +|+++.
T Consensus 65 is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KAR------------------------------------rEVeLH 108 (400)
T KOG0604|consen 65 ISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKAR------------------------------------REVELH 108 (400)
T ss_pred ehhhhhccccCCceEEEEeccchhhhHHHHHhcCHHHH------------------------------------hHhhhh
Confidence 34578999999999999876 89999999865332221 111111
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCC-CEEEeeEEe---cC--CceEEEeecCCcCCCChHHHhhc-CCCHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEV-DVLIPEVIQ---SS--ETVLILEFMDGIRLNDCESLEAF-GVNKQKVVE 159 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~-~v~vP~v~~---~~--~~vLvmE~i~G~~L~~~~~~~~~-~~~~~~l~~ 159 (864)
- +.. .++ .|.|-.||. .. ...+|||.++|+.|......+.. .+..++.++
T Consensus 109 w------~~s-----------------~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~e 165 (400)
T KOG0604|consen 109 W------MAS-----------------GHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASE 165 (400)
T ss_pred h------hhc-----------------CCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHH
Confidence 0 000 111 355666665 22 23579999999999776543322 244555555
Q ss_pred HHHHHH--HHHHHhcCeeccCCCCCCeEEccC-CCCceEEEecccccccC
Q 002927 160 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLS 206 (864)
Q Consensus 160 ~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~ 206 (864)
.+-++. +..+|..+|-|||+||+|+|.... ++..++|.|||++++-.
T Consensus 166 I~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~ 215 (400)
T KOG0604|consen 166 IMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ 215 (400)
T ss_pred HHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccC
Confidence 444433 788999999999999999999743 34568999999998754
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.9e-08 Score=105.14 Aligned_cols=138 Identities=16% Similarity=0.198 Sum_probs=87.6
Q ss_pred ccccccccceeeEEEE-ecCCCEEEEEEec--CCh-HHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 10 ETPLATASIAQVHRAT-LVDGRQVVVKVQH--QGI-KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 10 ~~plasaSigqV~~A~-l~~G~~VAVKv~~--p~i-~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
.+-||+|.+|.|-.++ +.+|.++||||.. |+- +.++-++.+++..-
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~C------------------------------ 132 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQC------------------------------ 132 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHh------------------------------
Confidence 4789999999999998 4599999999853 332 22222222111100
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH--H
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT--R 163 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~--~ 163 (864)
.--+|+-.+-+.|++ .++.|||||-+.|++|-.... ++.-+...+..+.+- .
T Consensus 133 -qgh~nilqLiefFEd------------------------d~~FYLVfEKm~GGplLshI~-~~~~F~E~EAs~vvkdia 186 (463)
T KOG0607|consen 133 -QGHKNILQLIEFFED------------------------DTRFYLVFEKMRGGPLLSHIQ-KRKHFNEREASRVVKDIA 186 (463)
T ss_pred -cCCccHHHHHHHhcc------------------------cceEEEEEecccCchHHHHHH-HhhhccHHHHHHHHHHHH
Confidence 001233333333321 566789999999999876543 223344444333332 2
Q ss_pred HHHHHHHhcCeeccCCCCCCeEEccCCC--CceEEEecccccc
Q 002927 164 AYAHQIYVDGFFNGDPHPGNFLVSKDPP--HRPILLDFGLTKK 204 (864)
Q Consensus 164 ~~l~~i~~~G~~H~D~hPgNIlv~~~~~--g~i~LiDFG~~~~ 204 (864)
..+..+|..||-|||+||+|||-... + .-++|+||-+...
T Consensus 187 ~aLdFlH~kgIAHRDlKPENiLC~~p-n~vsPvKiCDfDLgSg 228 (463)
T KOG0607|consen 187 SALDFLHTKGIAHRDLKPENILCESP-NKVSPVKICDFDLGSG 228 (463)
T ss_pred HHHHHHhhcCcccccCCccceeecCC-CCcCceeeeccccccc
Confidence 34889999999999999999998642 2 3488999977543
|
|
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.2e-08 Score=111.25 Aligned_cols=145 Identities=17% Similarity=0.167 Sum_probs=104.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|+||.|+-.+.+ +|+.+|.|-+ |-+.+++ -..|.--.+|.
T Consensus 191 RvlGkGGFGEV~acqvraTGKMYAcKkL----------~KKRiKk------------------------r~ge~maLnEk 236 (591)
T KOG0986|consen 191 RVLGKGGFGEVCACQVRATGKMYACKKL----------DKKRIKK------------------------RKGETMALNEK 236 (591)
T ss_pred EEEecccccceeEEEEecchhhHHHHHH----------HHHHHHH------------------------hhhhHHhhHHH
Confidence 78999999999999976 8999999832 1111110 01122234566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHH-HhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCES-LEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~-~~~~~~~~~~l~~~~~~~~ 165 (864)
..++++.. .+.|---|. ....+|||..+.|++|.-.+. ....+++.++..-..++++
T Consensus 237 ~iL~kV~s-------------------~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~ 297 (591)
T KOG0986|consen 237 QILEKVSS-------------------PFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEII 297 (591)
T ss_pred HHHHHhcc-------------------CcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHH
Confidence 67766543 234444443 456789999999999875432 2345788777766666655
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 210 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 210 (864)
++.+|+.+||.||+||.|||+++. |.+.|.|.|++..+++..+
T Consensus 298 cGLehlH~~~iVYRDLKPeNILLDd~--GhvRISDLGLAvei~~g~~ 342 (591)
T KOG0986|consen 298 CGLEHLHRRRIVYRDLKPENILLDDH--GHVRISDLGLAVEIPEGKP 342 (591)
T ss_pred hhHHHHHhcceeeccCChhheeeccC--CCeEeeccceEEecCCCCc
Confidence 899999999999999999999976 9999999999999987654
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.5e-08 Score=113.32 Aligned_cols=153 Identities=20% Similarity=0.272 Sum_probs=88.7
Q ss_pred ccccc-ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhh
Q 002927 5 FMDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 82 (864)
Q Consensus 5 F~~fd-~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 82 (864)
|++|- -.|+|+|.||||..|+.+ +..+|+||.... +++.-|- |++ .+++. .+- .
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~K---eRIL~Dt--------Wvr--DrkLG--tVp--------~- 615 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFK---ERILVDT--------WVR--DRKLG--TVP--------S- 615 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhh---hhhhhhh--------hhc--ccccC--ccc--------h-
Confidence 33443 379999999999999987 678999997542 2332222 111 01111 111 1
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC-CEEEeeEEe-cCCceEEEeec-CCcCCCChHHHhhcCCCHH--HH
Q 002927 83 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEV-DVLIPEVIQ-SSETVLILEFM-DGIRLNDCESLEAFGVNKQ--KV 157 (864)
Q Consensus 83 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~-~v~vP~v~~-~~~~vLvmE~i-~G~~L~~~~~~~~~~~~~~--~l 157 (864)
|..-+.++..+ .++ .+.+-.+++ ....+|+||-- +|+.|.|+.... ...+.. ++
T Consensus 616 -----EIqIla~l~~~---------------sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~k-p~m~E~eAk~ 674 (772)
T KOG1152|consen 616 -----EIQILATLNKH---------------SHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFK-PRMDEPEAKL 674 (772)
T ss_pred -----hHHHHHHhhhc---------------CccchhhhhheeecCCeeEEEecCCCCCcchhhhhhcc-CccchHHHHH
Confidence 22222332211 000 111222222 34467888853 566777765432 223322 22
Q ss_pred HHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 158 VEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 158 ~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+-..+.+-.+.+|..||+|||+|-+|+.|+.. |.++|||||.+..
T Consensus 675 IFkQV~agi~hlh~~~ivhrdikdenvivd~~--g~~klidfgsaa~ 719 (772)
T KOG1152|consen 675 IFKQVVAGIKHLHDQGIVHRDIKDENVIVDSN--GFVKLIDFGSAAY 719 (772)
T ss_pred HHHHHHhccccccccCceecccccccEEEecC--CeEEEeeccchhh
Confidence 22233334778899999999999999999854 9999999998654
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.9e-08 Score=105.01 Aligned_cols=79 Identities=19% Similarity=0.278 Sum_probs=51.9
Q ss_pred CceEEEeecCCcCCCChHHHh----hcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCC--CCceEEEec
Q 002927 128 ETVLILEFMDGIRLNDCESLE----AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP--PHRPILLDF 199 (864)
Q Consensus 128 ~~vLvmE~i~G~~L~~~~~~~----~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~--~g~i~LiDF 199 (864)
...|+.||.+- +|..+.... ...+.+..+-..+.+++ +..+|+.-++||||||.||||..++ .|+++|.||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 34699999982 222222211 12233333333444444 6777999999999999999998542 389999999
Q ss_pred ccccccCh
Q 002927 200 GLTKKLSS 207 (864)
Q Consensus 200 G~~~~l~~ 207 (864)
|+++.+..
T Consensus 181 GlaR~~~~ 188 (438)
T KOG0666|consen 181 GLARLFNN 188 (438)
T ss_pred cHHHHhhc
Confidence 99876644
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.3e-09 Score=119.34 Aligned_cols=140 Identities=14% Similarity=0.184 Sum_probs=95.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.-+|||++|-||||+.+ +|+.+|||+.+-.-.+. +. . +.+|+-..+|.
T Consensus 21 qrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd----~~-------------------~--------iqqei~~~~dc 69 (829)
T KOG0576|consen 21 QRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD----FS-------------------G--------IQQEIGMLRDC 69 (829)
T ss_pred eeecCCcccchhhhcccccCchhhheeeeccCCcc----cc-------------------c--------cccceeeeecC
Confidence 46999999999999986 89999999875222111 11 1 11222222332
Q ss_pred H--HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 E--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~--n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+ |+-.+-..+- +..+-.++||||.|++|.|..... ..+...+++...-+..
T Consensus 70 ~h~nivay~gsyl------------------------r~dklwicMEycgggslQdiy~~T-gplselqiayvcRetl~g 124 (829)
T KOG0576|consen 70 RHPNIVAYFGSYL------------------------RRDKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQG 124 (829)
T ss_pred CCcChHHHHhhhh------------------------hhcCcEEEEEecCCCcccceeeec-ccchhHHHHHHHhhhhcc
Confidence 2 1111111110 134567999999999999975432 2344555655555544
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
++.+|..|=+|||+|-+||++++. |.+++.|||.++.++..
T Consensus 125 l~ylhs~gk~hRdiKGanilltd~--gDvklaDfgvsaqitat 165 (829)
T KOG0576|consen 125 LKYLHSQGKIHRDIKGANILLTDE--GDVKLADFGVSAQITAT 165 (829)
T ss_pred chhhhcCCcccccccccceeeccc--CceeecccCchhhhhhh
Confidence 888999999999999999999976 89999999999888654
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.1e-09 Score=110.53 Aligned_cols=140 Identities=19% Similarity=0.241 Sum_probs=85.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.|+.|.|+.|||.... +|+..|+|+..-..-. . -++. ++.+|+
T Consensus 17 e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~--~-------------------~~~e--------------~l~rEa 61 (355)
T KOG0033|consen 17 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--A-------------------RDFQ--------------KLEREA 61 (355)
T ss_pred HHHccCchHHHHHHHhccchHHHHHHHhhhhhhc--c-------------------ccHH--------------HHHHHH
Confidence 46999999999999865 8999999964211000 0 0111 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHH---HHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQK---VVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~---l~~~~~ 162 (864)
+--+.+++ .+|-++.. .+-++||.|+++|..|-.-.. .+.-+.... ..++++
T Consensus 62 rIC~~LqH--------------------P~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV-~R~~ySEa~aSH~~rQiL 120 (355)
T KOG0033|consen 62 RICRKLQH--------------------PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQIL 120 (355)
T ss_pred HHHHhcCC--------------------CcEeehhhhhcccceeEEEEecccchHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 44333322 22333332 355889999999988753221 111111111 222222
Q ss_pred HHHHHHHHhcCeeccCCCCCCeEEccCCC-CceEEEecccccccCh
Q 002927 163 RAYAHQIYVDGFFNGDPHPGNFLVSKDPP-HRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~l~~i~~~G~~H~D~hPgNIlv~~~~~-g~i~LiDFG~~~~l~~ 207 (864)
++ +...|..||+|||+||.|+++....+ .-++|.|||++..+.+
T Consensus 121 ea-l~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~ 165 (355)
T KOG0033|consen 121 EA-LAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND 165 (355)
T ss_pred HH-HHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCC
Confidence 22 56678999999999999999975433 3589999999999873
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.70 E-value=4.1e-08 Score=99.80 Aligned_cols=78 Identities=19% Similarity=0.227 Sum_probs=61.5
Q ss_pred CCceEEEeecCCcCCCChHHHhh-c--CCCHHHHHHHHHHHH--HHHHHhcC--eeccCCCCCCeEEccCCCCceEEEec
Q 002927 127 SETVLILEFMDGIRLNDCESLEA-F--GVNKQKVVEEITRAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDF 199 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~-~--~~~~~~l~~~~~~~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDF 199 (864)
...+|+..|..-++|.|...... . -++..+++..+...+ ++++|+.. +.|+|+||+||++.++ +.++|.||
T Consensus 96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~--~~~vl~D~ 173 (302)
T KOG2345|consen 96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDS--GLPVLMDL 173 (302)
T ss_pred eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCC--CceEEEec
Confidence 44678999887777777654322 2 356777877777666 99999999 9999999999999864 89999999
Q ss_pred ccccccC
Q 002927 200 GLTKKLS 206 (864)
Q Consensus 200 G~~~~l~ 206 (864)
|.+...+
T Consensus 174 GS~~~a~ 180 (302)
T KOG2345|consen 174 GSATQAP 180 (302)
T ss_pred cCccccc
Confidence 9987654
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.6e-08 Score=105.90 Aligned_cols=147 Identities=18% Similarity=0.165 Sum_probs=91.3
Q ss_pred ccccc-cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 6 MDFVE-TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 6 ~~fd~-~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
.+|+. +.||.||++.|-.++++ +.+.+|+||.+...- .|- -+++++-.
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~----ndd----------------edidwvqt---------- 299 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELV----NDD----------------EDIDWVQT---------- 299 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhc----CCc----------------ccchhHHh----------
Confidence 45664 78999999999999986 788999998653221 111 11111111
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHH
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEI 161 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~ 161 (864)
|-...+. +.| ...-|-+..-+. .++.+.|.||++|+.|--.....+ ....-.++...-
T Consensus 300 ----ek~vfe~-asn---------------~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~e 359 (593)
T KOG0695|consen 300 ----EKHVFEQ-ASN---------------NPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAE 359 (593)
T ss_pred ----hHHHHHh-ccC---------------CCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHH
Confidence 1111111 111 011111222222 466789999999998865443221 111122333333
Q ss_pred HHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 162 TRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 162 ~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+.+.+..+|+.||+.||+|-.|+|++.+ |.|+|.|+||+++
T Consensus 360 i~lal~flh~rgiiyrdlkldnvlldae--ghikltdygmcke 400 (593)
T KOG0695|consen 360 ICLALNFLHERGIIYRDLKLDNVLLDAE--GHIKLTDYGMCKE 400 (593)
T ss_pred HHHHHHHHhhcCeeeeeccccceEEccC--Cceeecccchhhc
Confidence 4455888999999999999999999976 9999999999875
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.67 E-value=4.6e-08 Score=101.12 Aligned_cols=103 Identities=21% Similarity=0.291 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--c------CCceEEEeecCCc-CCCChHHHhh--cCCC
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--S------SETVLILEFMDGI-RLNDCESLEA--FGVN 153 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~------~~~vLvmE~i~G~-~L~~~~~~~~--~~~~ 153 (864)
..+|.+++.++++. ++.+|+++. . .+.+|+||+++|. +|.++..... ....
T Consensus 58 a~~E~~~~~~L~~~------------------Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~ 119 (206)
T PF06293_consen 58 AKREWRNLQRLREA------------------GIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQ 119 (206)
T ss_pred HHHHHHHHHHHHHc------------------CCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhh
Confidence 56788999998762 577888864 1 2348999999994 6777654211 1112
Q ss_pred HHHHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCC-CCceEEEecccccccC
Q 002927 154 KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLS 206 (864)
Q Consensus 154 ~~~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~ 206 (864)
...+++.+.+. +..+|..||+|+|++|+||||+.++ +.++.||||+-+..-.
T Consensus 120 ~~~ll~~l~~~-i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 120 RRELLRALARL-IAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHHHHHHHHHH-HHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 34555555544 7789999999999999999999752 2379999999877654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.67 E-value=7.8e-08 Score=104.98 Aligned_cols=143 Identities=15% Similarity=0.151 Sum_probs=95.9
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+-||.|-||.|+||++ .|+.|||||-.-.-+..-.++-+|...++ +++|
T Consensus 217 e~IGkGRyGEVwrG~w-rGe~VAVKiF~srdE~SWfrEtEIYqTvm----------------------------LRHE-- 265 (513)
T KOG2052|consen 217 EIIGKGRFGEVWRGRW-RGEDVAVKIFSSRDERSWFRETEIYQTVM----------------------------LRHE-- 265 (513)
T ss_pred EEecCccccceeeccc-cCCceEEEEecccchhhhhhHHHHHHHHH----------------------------hccc--
Confidence 5699999999999998 59999999865433333323322222111 1111
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQ 168 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~ 168 (864)
|+-.|-.. + .+ +. ...|+.+||.+|-+-++|.|++. +..++.+...+....+. +..
T Consensus 266 NILgFIaa--D---~~-------~~--------gs~TQLwLvTdYHe~GSL~DyL~--r~tv~~~~ml~LalS~AsGLaH 323 (513)
T KOG2052|consen 266 NILGFIAA--D---NK-------DN--------GSWTQLWLVTDYHEHGSLYDYLN--RNTVTTEGMLKLALSIASGLAH 323 (513)
T ss_pred hhhhhhhc--c---cc-------CC--------CceEEEEEeeecccCCcHHHHHh--hccCCHHHHHHHHHHHhhhHHH
Confidence 33333110 0 00 00 01467789999999999999854 46677777766665544 666
Q ss_pred HH--------hcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 169 IY--------VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 169 i~--------~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+| .-.|-|||+|.-||||..+ |.-+|.|+|++.+.+..
T Consensus 324 LH~eI~GTqgKPaIAHRDlKSKNILVKkn--~~C~IADLGLAv~h~~~ 369 (513)
T KOG2052|consen 324 LHMEIVGTQGKPAIAHRDLKSKNILVKKN--GTCCIADLGLAVRHDSD 369 (513)
T ss_pred HHHHHhcCCCCchhhccccccccEEEccC--CcEEEeeceeeEEeccc
Confidence 66 3479999999999999865 89999999999876653
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.6e-08 Score=116.83 Aligned_cols=139 Identities=21% Similarity=0.261 Sum_probs=100.8
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+-||.|.||.||+|+.. +-..||||.++.....+ ...|
T Consensus 492 ~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~------------------------------------~~~d 535 (774)
T KOG1026|consen 492 EELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQ------------------------------------ARQD 535 (774)
T ss_pred hhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHH------------------------------------HHHH
Confidence 56999999999999964 23579999766544333 2346
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhc-------C--
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF-------G-- 151 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~-------~-- 151 (864)
|++||.-+..|.| + .|-+++. ....+||.||++-++|.+++..... +
T Consensus 536 F~REaeLla~l~H------------------~--nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~ 595 (774)
T KOG1026|consen 536 FRREAELLAELQH------------------P--NIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQD 595 (774)
T ss_pred HHHHHHHHHhccC------------------C--CeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCC
Confidence 7888887777644 2 2334443 4568999999999999998664321 1
Q ss_pred ----CCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 152 ----VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 152 ----~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+...+++....++. +.+|-++.||||||---|.||.+. ..++|.||||++.+-.
T Consensus 596 ~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~--l~VKIsDfGLsRdiYs 655 (774)
T KOG1026|consen 596 TPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN--LVVKISDFGLSRDIYS 655 (774)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc--eEEEecccccchhhhh
Confidence 33445555555544 667779999999999999999865 7899999999987543
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.6e-07 Score=96.53 Aligned_cols=78 Identities=26% Similarity=0.343 Sum_probs=56.8
Q ss_pred CCceEEEeecCCcCCCChHHHhhcCCCH---HHHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 127 SETVLILEFMDGIRLNDCESLEAFGVNK---QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~---~~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
.-.|.+|||++=++|..- ....|+-. +++.+.+.. .+..+|..++||||||.+||||-+...-+++|+|||...
T Consensus 95 d~YvF~qE~aP~gdL~sn--v~~~GigE~~~K~v~~ql~S-Ai~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~ 171 (378)
T KOG1345|consen 95 DAYVFVQEFAPRGDLRSN--VEAAGIGEANTKKVFAQLLS-AIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTR 171 (378)
T ss_pred ceEEEeeccCccchhhhh--cCcccccHHHHHHHHHHHHH-HHHHhhccchhhcccccceEEEecCCccEEEeeeccccc
Confidence 345899999998887754 23344432 344444443 477889999999999999999965434689999999987
Q ss_pred ccCh
Q 002927 204 KLSS 207 (864)
Q Consensus 204 ~l~~ 207 (864)
....
T Consensus 172 k~g~ 175 (378)
T KOG1345|consen 172 KVGT 175 (378)
T ss_pred ccCc
Confidence 6543
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.59 E-value=7.8e-08 Score=108.26 Aligned_cols=140 Identities=19% Similarity=0.198 Sum_probs=100.6
Q ss_pred cccccccceeeEEEEecC---CC--EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLVD---GR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~---G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+-||.|-||-||.|+..+ |+ .||||+=+.+..- +. . | .|
T Consensus 395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~-------------------------d~-----t-----e-kf 438 (974)
T KOG4257|consen 395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTP-------------------------DD-----T-----E-KF 438 (974)
T ss_pred HhhcCCcccceeeeEecccccCcceeeeeehhccCCCh-------------------------hh-----H-----H-HH
Confidence 569999999999999643 44 4788864432211 00 0 0 26
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
..||--++.|.| .+|-+++. ....+||||.++=+.|..++..++..++...+.....
T Consensus 439 lqEa~iMrnfdH--------------------phIikLIGv~~e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~ 498 (974)
T KOG4257|consen 439 LQEASIMRNFDH--------------------PHIIKLIGVCVEQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCY 498 (974)
T ss_pred HHHHHHHHhCCC--------------------cchhheeeeeeccceeEEEecccchhHHHHHHhccccchHHHHHHHHH
Confidence 667766665533 23444443 3457899999998899888776666666666666555
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
++. +..++...|+|||+-..||||... ..++|.|||+++-++++
T Consensus 499 Qi~talaYLeSkrfVHRDIAaRNiLVsSp--~CVKLaDFGLSR~~ed~ 544 (974)
T KOG4257|consen 499 QICTALAYLESKRFVHRDIAARNILVSSP--QCVKLADFGLSRYLEDD 544 (974)
T ss_pred HHHHHHHHHHhhchhhhhhhhhheeecCc--ceeeecccchhhhcccc
Confidence 554 778899999999999999999864 68999999999988764
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.9e-08 Score=114.81 Aligned_cols=84 Identities=20% Similarity=0.162 Sum_probs=71.9
Q ss_pred CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 127 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+..-||++|++++.|.|..+..+..+-.+.++....++. ++.|++++++||||-..|+||..- ..+++.|||+++-
T Consensus 770 s~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP--~hvkitdfgla~l 847 (1177)
T KOG1025|consen 770 STLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSP--NHVKITDFGLAKL 847 (1177)
T ss_pred chHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCC--CeEEEEecchhhc
Confidence 445689999999999999888877788888888887776 888999999999999999999853 6899999999998
Q ss_pred cChHHHHH
Q 002927 205 LSSSMKQA 212 (864)
Q Consensus 205 l~~~~r~~ 212 (864)
+.++..+.
T Consensus 848 l~~d~~ey 855 (1177)
T KOG1025|consen 848 LAPDEKEY 855 (1177)
T ss_pred cCcccccc
Confidence 87765543
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=2.4e-07 Score=117.94 Aligned_cols=125 Identities=15% Similarity=0.192 Sum_probs=79.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||..+..... ...|.
T Consensus 696 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----------------------------------------~~~~~ 734 (968)
T PLN00113 696 NVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-----------------------------------------PSSEI 734 (968)
T ss_pred cEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-----------------------------------------cHHHH
Confidence 57999999999999975 8999999975421100 00122
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.+++ ++ .|.+++. ....+|||||++|++|.++.. . .+.......+.++.
T Consensus 735 ~~l~~l~------------------Hp--nIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~--~--l~~~~~~~i~~~ia 790 (968)
T PLN00113 735 ADMGKLQ------------------HP--NIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR--N--LSWERRRKIAIGIA 790 (968)
T ss_pred HHHhhCC------------------CC--CcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh--c--CCHHHHHHHHHHHH
Confidence 2222322 12 2333432 456789999999999988753 1 33333333333322
Q ss_pred --HHHHH---hcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 166 --AHQIY---VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 166 --l~~i~---~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
+..+| ..+++|||+||.||+++.+ +..++ +||..+
T Consensus 791 ~~L~yLH~~~~~~iiH~dlkp~Nil~~~~--~~~~~-~~~~~~ 830 (968)
T PLN00113 791 KALRFLHCRCSPAVVVGNLSPEKIIIDGK--DEPHL-RLSLPG 830 (968)
T ss_pred HHHHHhccCCCCCeecCCCCHHhEEECCC--CceEE-Eecccc
Confidence 67778 6699999999999999865 44443 355544
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.6e-07 Score=101.05 Aligned_cols=171 Identities=12% Similarity=0.116 Sum_probs=105.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.-+|+|.||+|-....+ +++.|||||.+- + ..++++ -+.|.
T Consensus 95 ~~lGeGtFGkV~ec~D~~~~~~vAlKIik~---------------V-----------------~kYreA------a~iEi 136 (415)
T KOG0671|consen 95 DLLGEGTFGKVVECWDRETKEHVALKIIKN---------------V-----------------DKYREA------ALIEI 136 (415)
T ss_pred hhhcCCcccceEEEeecCCCceehHHHHHH---------------H-----------------HHHhhH------HHHHH
Confidence 45899999999999975 689999996541 1 111111 11245
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeE---Ee-cCCceEEEeecCCcCCCChHHHhh-cCCCH---HHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV---IQ-SSETVLILEFMDGIRLNDCESLEA-FGVNK---QKVVEEI 161 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v---~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~---~~l~~~~ 161 (864)
+.++++.+.-- .....+-.+ +. .+..+||.|.+ |.++.|.+.... ..+.. +.++.++
T Consensus 137 ~vLqki~~~DP--------------~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL 201 (415)
T KOG0671|consen 137 EVLQKINESDP--------------NGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQL 201 (415)
T ss_pred HHHHHHHhcCC--------------CCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHH
Confidence 55556544210 111222223 22 67788999976 788888754321 11222 3344444
Q ss_pred HHHHHHHHHhcCeeccCCCCCCeEEccCC------------------CCceEEEecccccccChHHHHHHHHHHHHHHhC
Q 002927 162 TRAYAHQIYVDGFFNGDPHPGNFLVSKDP------------------PHRPILLDFGLTKKLSSSMKQALAKMFFAAAEG 223 (864)
Q Consensus 162 ~~~~l~~i~~~G~~H~D~hPgNIlv~~~~------------------~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~ 223 (864)
+++ +..+|..+++|-||||+||++.... ...|++||||.+..-.+.. ..++.-
T Consensus 202 ~~s-v~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h--------s~iVsT 272 (415)
T KOG0671|consen 202 LES-VAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH--------STIVST 272 (415)
T ss_pred HHH-HHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc--------ceeeec
Confidence 444 6678999999999999999975320 1347899999987655443 223333
Q ss_pred CHHHHHHHHHHcCCCcCCCc
Q 002927 224 DHVALLSAFAEMGLRLRLDV 243 (864)
Q Consensus 224 d~~~~~~~~~~~G~~~~~~~ 243 (864)
...++-+.+++||.....|.
T Consensus 273 RHYRAPEViLgLGwS~pCDv 292 (415)
T KOG0671|consen 273 RHYRAPEVILGLGWSQPCDV 292 (415)
T ss_pred cccCCchheeccCcCCccCc
Confidence 34456788889998755553
|
|
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=98.50 E-value=8e-07 Score=93.19 Aligned_cols=32 Identities=22% Similarity=0.264 Sum_probs=26.8
Q ss_pred cCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 172 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 172 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..++|+|+||+||+++++ + +.+|||+.++.=+
T Consensus 153 ~~~~HgD~~~~Nii~~~~--~-~~iIDwe~a~~Gd 184 (226)
T TIGR02172 153 STCLHGDFQIGNLITSGK--G-TYWIDLGDFGYGN 184 (226)
T ss_pred CceEecCCCCCcEEEcCC--C-cEEEechhcCcCC
Confidence 467899999999999854 5 9999999887543
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
| >KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.8e-07 Score=99.14 Aligned_cols=180 Identities=14% Similarity=0.261 Sum_probs=120.8
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+-||-|--+-||.+-..+|++.++|+-|-|-.. ++.++.=-..+.. .-...++. ..-|.-.+|..
T Consensus 98 nqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtS-----FR~Vk~kRDY~r~---r~~~sWly-------LSRlaa~kEfa 162 (465)
T KOG2268|consen 98 NQIGVGKESDIYVVADEEGNPLILKLHRLGRTS-----FRNVKNKRDYLRK---RKSGSWLY-------LSRLAATKEFA 162 (465)
T ss_pred cccccccccceEEEecCCCCchhHHHHhhhhhh-----HHHhhhhhhhHhc---CCccchhh-------hHHHHHHHHHH
Confidence 568888889999999889999999976644321 1111111111110 00111110 11222345556
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 170 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~i~ 170 (864)
-++.+.+ ..+.||+++.+++++.|||+++|.+|..+..+ .++..+...++.++. .+-
T Consensus 163 fmkaL~e------------------~gfpVPkpiD~~RH~Vvmelv~g~Pl~~v~~v----~d~~~ly~~lm~~Iv-~la 219 (465)
T KOG2268|consen 163 FMKALYE------------------RGFPVPKPIDHNRHCVVMELVDGYPLRQVRHV----EDPPTLYDDLMGLIV-RLA 219 (465)
T ss_pred HHHHHHH------------------cCCCCCCcccccceeeHHHhhcccceeeeeec----CChHHHHHHHHHHHH-HHH
Confidence 6666654 25779999999999999999999999987432 356777777776654 456
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHH-HcCC
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFA-EMGL 237 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~-~~G~ 237 (864)
.+|+||+|-.--||||.++ +++++|||-.+...+.+.-+.| ..+|.+=+.+.++ ..|.
T Consensus 220 ~~GlIHgDFNEFNimv~dd--~~i~vIDFPQmvS~sh~nA~~Y-------FdRDv~Ci~~fFrKkf~Y 278 (465)
T KOG2268|consen 220 NHGLIHGDFNEFNIMVKDD--DKIVVIDFPQMVSTSHPNAEYY-------FDRDVECIRAFFRKKFGY 278 (465)
T ss_pred HcCceecccchheeEEecC--CCEEEeechHhhccCCCcccee-------ecccHHHHHHHHHHhcCC
Confidence 8999999999999999965 8999999998888776655444 4566666665554 3454
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.8e-07 Score=98.44 Aligned_cols=100 Identities=19% Similarity=0.315 Sum_probs=69.5
Q ss_pred CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 127 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
.+.++|||++++ +|.++.. ...|-+.+...+.+.+ ++.+|..||+||||||.||+|..+ +.++++|||++..
T Consensus 94 ~e~y~v~e~m~~-nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~--~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 94 QEVYLVMELMDA-NLCQVIL---MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSD--CTLKILDFGLART 167 (369)
T ss_pred HhHHHHHHhhhh-HHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecch--hheeeccchhhcc
Confidence 456799999974 4444433 3356666766666655 888999999999999999999976 8999999999987
Q ss_pred cChHHHHHHHHHHHHHHhCCHHHHHHHHHHcCCC
Q 002927 205 LSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 238 (864)
Q Consensus 205 l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~G~~ 238 (864)
-...++-. -.+...+..+.+++.++|..
T Consensus 168 e~~~~~mt------pyVvtRyyrapevil~~~~k 195 (369)
T KOG0665|consen 168 EDTDFMMT------PYVVTRYYRAPEVILGMGYK 195 (369)
T ss_pred cCcccccC------chhheeeccCchheeccCCc
Confidence 66552211 11223344455666666643
|
|
| >cd05150 APH Aminoglycoside 3'-phosphotransferase (APH) | Back alignment and domain information |
|---|
Probab=98.38 E-value=8.3e-06 Score=86.49 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=27.6
Q ss_pred cCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 172 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 172 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..++|+|+||+|||++.+ +.+.||||+.++.-++
T Consensus 163 ~~l~HgD~~~~Nil~~~~--~~~~iIDwe~a~~gdp 196 (244)
T cd05150 163 LVVTHGDACLPNIIVDPG--KFSGFIDLGRLGVADR 196 (244)
T ss_pred eEEECCCCCCccEEEeCC--cEEEEEEccccccccH
Confidence 469999999999999853 5567999998875443
|
The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio |
| >PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily | Back alignment and domain information |
|---|
Probab=98.37 E-value=2.4e-06 Score=89.16 Aligned_cols=36 Identities=31% Similarity=0.378 Sum_probs=24.7
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+++|+|+||+|||++++ ++++.||||+.++.-++
T Consensus 165 ~~~~~HgD~~~~Nil~~~~-~~~i~iID~e~a~~~~~ 200 (239)
T PF01636_consen 165 PPVLIHGDLHPGNILVDPS-DGRIGIIDFEDAGWGDP 200 (239)
T ss_dssp CEEEE-SS-SGGGEEEESS-TTEEEE--GTT-EEEET
T ss_pred CcEEEEeccccccceeeec-cceeEEEecccceECCH
Confidence 4679999999999999932 37788999999876544
|
; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B .... |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.6e-07 Score=103.73 Aligned_cols=78 Identities=19% Similarity=0.187 Sum_probs=59.5
Q ss_pred ceEEEeecCCcCCCChHHHhhcCCC--HHHHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 129 TVLILEFMDGIRLNDCESLEAFGVN--KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~~~~~~~--~~~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
-|+.||-|-|+.|...+.- +..++ ..++.-.++--.+..+|++||+.|||||+|+|++.+ |-++|.|||.++.+.
T Consensus 495 vYmLmEaClGGElWTiLrd-Rg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~--Gy~KLVDFGFAKki~ 571 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILRD-RGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNR--GYLKLVDFGFAKKIG 571 (732)
T ss_pred hhhhHHhhcCchhhhhhhh-cCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccC--CceEEeehhhHHHhc
Confidence 4689999999999887542 22232 234444444444889999999999999999999966 999999999999886
Q ss_pred hHH
Q 002927 207 SSM 209 (864)
Q Consensus 207 ~~~ 209 (864)
...
T Consensus 572 ~g~ 574 (732)
T KOG0614|consen 572 SGR 574 (732)
T ss_pred cCC
Confidence 543
|
|
| >PRK09550 mtnK methylthioribose kinase; Reviewed | Back alignment and domain information |
|---|
Probab=98.33 E-value=7.8e-06 Score=92.11 Aligned_cols=52 Identities=13% Similarity=0.353 Sum_probs=37.9
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEecccc--cccChHHHHHHHHHHHHHHhCCH
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT--KKLSSSMKQALAKMFFAAAEGDH 225 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~--~~l~~~~r~~~~~l~~a~~~~d~ 225 (864)
...++|+|+||||||+..+ .+++|||=++ +...=+.-..+..++.+.+..+.
T Consensus 222 ~~~l~HgDl~~gni~~~~~---~~~viD~E~a~~G~~~~Dlg~~lanl~~~~~~~~~ 275 (401)
T PRK09550 222 AEALLHGDLHTGSIFVTEE---ETKVIDPEFAFYGPIGFDIGTFIANLLLNYCSQPG 275 (401)
T ss_pred CCceeeccCCcccEEeeCC---CcEEEeccccccCChHHHHHHHHHHHHHHHhcCcc
Confidence 3578999999999999753 6999998644 44444455567777777766544
|
|
| >cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members | Back alignment and domain information |
|---|
Probab=98.31 E-value=3.7e-06 Score=88.77 Aligned_cols=34 Identities=35% Similarity=0.553 Sum_probs=27.1
Q ss_pred hcCeeccCCCCCCeEEccCCCCce-EEEecccccccCh
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRP-ILLDFGLTKKLSS 207 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i-~LiDFG~~~~l~~ 207 (864)
..+++|+|+||+||+|+. +++ .||||+.+..=++
T Consensus 163 ~~~l~HGD~~~~Nvlv~~---~~i~giIDw~~a~~gDp 197 (235)
T cd05155 163 PPVWFHGDLAPGNLLVQD---GRLSAVIDFGCLGVGDP 197 (235)
T ss_pred CceEEeCCCCCCcEEEEC---CCEEEEEeCcccCcCCh
Confidence 356999999999999974 354 6999998776544
|
The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista |
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.30 E-value=3.6e-06 Score=90.71 Aligned_cols=137 Identities=21% Similarity=0.246 Sum_probs=88.5
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.++.|++|+||++... ..+++|+..+...... .....+.+|..
T Consensus 6 ~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~----------------------------------~~~~~~~~e~~ 49 (384)
T COG0515 6 RKLGEGSFGEVYLARDR--KLVALKVLAKKLESKS----------------------------------KEVERFLREIQ 49 (384)
T ss_pred EeecCCCCeEEEEEEec--cEEEEEeechhhccch----------------------------------hHHHHHHHHHH
Confidence 46889999999999976 8899998775543221 00111334444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh--cCCCHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITRA 164 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~--~~~~~~~l~~~~~~~ 164 (864)
-...+.+ .. .+.+++ . ....+++||++.|..+.++..... ...........+.+.
T Consensus 50 ~~~~~~~-----------------~~--~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (384)
T COG0515 50 ILASLNH-----------------PP--NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQI 110 (384)
T ss_pred HHHHccC-----------------Cc--ceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHH
Confidence 3333321 10 122222 2 233589999999999985543221 134444444444443
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCC-ceEEEecccccc
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPH-RPILLDFGLTKK 204 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g-~i~LiDFG~~~~ 204 (864)
. +..+|..|++|||+||.||+++.. + .++++|||++..
T Consensus 111 ~~~l~~~H~~~~~hrd~kp~nil~~~~--~~~~~l~dfg~~~~ 151 (384)
T COG0515 111 LSALEYLHSKGIIHRDIKPENILLDRD--GRVVKLIDFGLAKL 151 (384)
T ss_pred HHHHHHHHhCCeeccCCCHHHeeecCC--CCeEEEeccCccee
Confidence 3 568999999999999999999965 5 699999999883
|
|
| >PRK10593 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=3.2e-06 Score=92.48 Aligned_cols=76 Identities=16% Similarity=0.131 Sum_probs=55.5
Q ss_pred ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 10 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.++|+.|.+++||+....+| .++||+.+...... .+..|+
T Consensus 19 ~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~~~~~---------------------------------------~~~~Ea 58 (297)
T PRK10593 19 VECISEQPYAALWALYDSQG-NPMPLMARSFSTPG---------------------------------------VAQQEA 58 (297)
T ss_pred eeecCCccceeEEEEEcCCC-CEEEEEecccccch---------------------------------------HHHHHH
Confidence 37999999999999986556 58889865321110 155688
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-------cCCceEEEeecCCcCCC
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLN 142 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLvmE~i~G~~L~ 142 (864)
++++.+++. ..+.||+|+. .+..+|||||++|.++.
T Consensus 59 ~~L~~L~~~-----------------~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~~ 101 (297)
T PRK10593 59 WKLSMLARS-----------------GTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSVE 101 (297)
T ss_pred HHHHHHccC-----------------CCCCcCcEEEEeccCCcCCCeEEEEeccCCEecC
Confidence 888888642 2478999994 14579999999998774
|
|
| >COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.28 E-value=8.5e-06 Score=79.92 Aligned_cols=125 Identities=23% Similarity=0.371 Sum_probs=91.7
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+-||.|..|.||.+.. .|.+||+||||++.... .+..||+
T Consensus 28 ~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr~ds~r~---------------------------------------~l~kEak 67 (201)
T COG2112 28 KELAKGTTSVVYLGEW-RGGEVALKVRRRDSPRR---------------------------------------NLEKEAK 67 (201)
T ss_pred hhhhcccccEEEEeec-cCceEEEEEecCCcchh---------------------------------------hHHHHHH
Confidence 5699999999999997 46699999999876532 1445787
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 170 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~i~ 170 (864)
-++.++.. -..|++|.-++..+.|||++|.+|.++.. +.+++.+.+.+-+++ -+=
T Consensus 68 iLeil~g~-------------------~~~p~vy~yg~~~i~me~i~G~~L~~~~~----~~~rk~l~~vlE~a~--~LD 122 (201)
T COG2112 68 ILEILAGE-------------------GVTPEVYFYGEDFIRMEYIDGRPLGKLEI----GGDRKHLLRVLEKAY--KLD 122 (201)
T ss_pred HHHHhhhc-------------------CCCceEEEechhhhhhhhhcCcchhhhhh----cccHHHHHHHHHHHH--HHH
Confidence 77776552 24689988777778899999999988643 225666665555544 223
Q ss_pred hcCeeccCCCCC--CeEEccCCCCceEEEeccccc
Q 002927 171 VDGFFNGDPHPG--NFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 171 ~~G~~H~D~hPg--NIlv~~~~~g~i~LiDFG~~~ 203 (864)
..||-|..++-+ ||++.+ +++.||||--++
T Consensus 123 ~~GI~H~El~~~~k~vlv~~---~~~~iIDFd~At 154 (201)
T COG2112 123 RLGIEHGELSRPWKNVLVND---RDVYIIDFDSAT 154 (201)
T ss_pred HhccchhhhcCCceeEEecC---CcEEEEEccchh
Confidence 569999999843 666642 589999998776
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.2e-06 Score=98.77 Aligned_cols=138 Identities=18% Similarity=0.185 Sum_probs=89.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.-||-|-+|.||.|.++ -.-.||||.++.+.-+ ++ .|..||
T Consensus 273 hKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe----------------------------ve----------EFLkEA 314 (1157)
T KOG4278|consen 273 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----------------------------VE----------EFLKEA 314 (1157)
T ss_pred eccCCCcccceeeeeeeccceeeehhhhhhcchh----------------------------HH----------HHHHHH
Confidence 56999999999999987 4678999965533211 11 155566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cC---CceEEEeecCCcCCCChHHHhhcC-CCHHHHHH--HHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SS---ETVLILEFMDGIRLNDCESLEAFG-VNKQKVVE--EIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~---~~vLvmE~i~G~~L~~~~~~~~~~-~~~~~l~~--~~~ 162 (864)
..++.+.|.. +-++.. |+ ..||+.||+.-+.|-|+++..... +..--++. ..+
T Consensus 315 AvMKeikHpN--------------------LVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQI 374 (1157)
T KOG4278|consen 315 AVMKEIKHPN--------------------LVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQI 374 (1157)
T ss_pred HHHHhhcCcc--------------------HHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHH
Confidence 6655543310 001111 32 468999999888887775432211 11111111 222
Q ss_pred HHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 163 RAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 163 ~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
...++++-..+||||||-..|.||.++ .-+++.|||+++.++.+
T Consensus 375 sSaMeYLEkknFIHRDLAARNCLVgEn--hiVKvADFGLsRlMtgD 418 (1157)
T KOG4278|consen 375 SSAMEYLEKKNFIHRDLAARNCLVGEN--HIVKVADFGLSRLMTGD 418 (1157)
T ss_pred HHHHHHHHHhhhhhhhhhhhhcccccc--ceEEeeccchhhhhcCC
Confidence 333677778999999999999999865 67889999998877644
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.16 E-value=5.9e-06 Score=99.28 Aligned_cols=139 Identities=16% Similarity=0.148 Sum_probs=94.3
Q ss_pred ccccccceeeEEEEec----C----CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 12 PLATASIAQVHRATLV----D----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 12 plasaSigqV~~A~l~----~----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
++|+|.||+|++|.++ . ...||||..+......-..
T Consensus 303 ~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~------------------------------------ 346 (609)
T KOG0200|consen 303 YLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKK------------------------------------ 346 (609)
T ss_pred eeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHH------------------------------------
Confidence 9999999999999964 1 3579999877665442111
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhh-----------
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEA----------- 149 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~----------- 149 (864)
++..|.+.+..+.. ++++ +.-+-. .+..++|+||++.+.|.+++...+
T Consensus 347 ~~~~El~~m~~~g~-----------------H~ni-v~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~ 408 (609)
T KOG0200|consen 347 DLMSELNVLKELGK-----------------HPNI-VNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVF 408 (609)
T ss_pred HHHHHHHHHHHhcC-----------------Ccch-hhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCC
Confidence 13334444444322 1111 111111 345789999999999988865444
Q ss_pred ----cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 150 ----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 150 ----~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+...++.....++. ++.+....++|||+-.-|||+..+ ..+++.|||+++...
T Consensus 409 ~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~--~~~kIaDFGlar~~~ 469 (609)
T KOG0200|consen 409 PNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKN--KVIKIADFGLARDHY 469 (609)
T ss_pred ccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCC--CEEEEccccceeccC
Confidence 1155566666655555 677788999999999999999865 678999999998543
|
|
| >PLN02756 S-methyl-5-thioribose kinase | Back alignment and domain information |
|---|
Probab=98.13 E-value=2.4e-05 Score=87.79 Aligned_cols=51 Identities=20% Similarity=0.356 Sum_probs=36.5
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEec--ccccccChHHHHHHHHHHHHHHhCC
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDF--GLTKKLSSSMKQALAKMFFAAAEGD 224 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDF--G~~~~l~~~~r~~~~~l~~a~~~~d 224 (864)
....+|+|+||||||+.++ ..++||. ...+...=+.-..+..++.+...++
T Consensus 229 ~~~L~HGDl~~g~i~~~~~---~~~~id~ef~~~g~~~~d~g~~~~~~~~~~~~~~ 281 (418)
T PLN02756 229 AQALVHGDLHTGSVMVTPD---STQVIDPEFAFYGPMGFDIGAFLGNLILAYFAQD 281 (418)
T ss_pred ccceeecCCCCCcEEEcCC---CceEecchhhccCchHHhHHHHHhhhHHHHhhCc
Confidence 3679999999999999864 5889994 5555544444456667777766554
|
|
| >cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes | Back alignment and domain information |
|---|
Probab=98.13 E-value=2.1e-05 Score=82.77 Aligned_cols=77 Identities=17% Similarity=0.246 Sum_probs=54.2
Q ss_pred ccccccccceeeEEEEecC--CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 10 ETPLATASIAQVHRATLVD--GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~--G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
-+|+..|-...||+....+ ++.|++|+..++... -+|..+
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~--------------------------------------~~d~~~ 44 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL--------------------------------------IIDRER 44 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc--------------------------------------eecHHH
Confidence 4789999999999998764 689999987654221 123345
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCC
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLND 143 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~ 143 (864)
|.+.+..++.. .+ +|+++...+..++|||++|.++..
T Consensus 45 E~~~~~~l~~~------------------gl-~P~v~~~~~~~~l~e~i~G~~l~~ 81 (235)
T cd05157 45 ELRIHKLLSKH------------------GL-APKLYATFQNGLIYEFIPGRTLEP 81 (235)
T ss_pred HHHHHHHHHhC------------------CC-CCeEEEEeCCcEEEEeeCCCcCCH
Confidence 77777666541 23 678876545678999999988753
|
ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.09 E-value=4.6e-06 Score=95.11 Aligned_cols=76 Identities=16% Similarity=0.135 Sum_probs=57.1
Q ss_pred ceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhc--CeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 129 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVD--GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~--G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
.++|.|.+.+++|..+.+ +....+.+.+-.++-+++ |..+|.+ -|+|||||-.||||+.. .|.++|.|.|++..
T Consensus 118 in~iTEL~TSGtLr~Y~k-k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~-~G~VKIGDLGLAtl 195 (632)
T KOG0584|consen 118 INFITELFTSGTLREYRK-KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGN-LGEVKIGDLGLATL 195 (632)
T ss_pred eeeeeecccCCcHHHHHH-HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCC-cCceeecchhHHHH
Confidence 579999999999998854 233455554444444443 5566654 59999999999999863 69999999999886
Q ss_pred cC
Q 002927 205 LS 206 (864)
Q Consensus 205 l~ 206 (864)
+.
T Consensus 196 ~r 197 (632)
T KOG0584|consen 196 LR 197 (632)
T ss_pred hh
Confidence 54
|
|
| >TIGR02721 ycfN_thiK thiamine kinase | Back alignment and domain information |
|---|
Probab=98.07 E-value=4.2e-05 Score=81.82 Aligned_cols=137 Identities=18% Similarity=0.147 Sum_probs=84.7
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
.++..|-..++|+.. .+|+.++||+..++... -.+|..+|.+
T Consensus 2 ~~~~~G~tn~~y~~~-~~~~~~vlR~~~~~~~~-------------------------------------~~~~r~~E~~ 43 (256)
T TIGR02721 2 QTLSGGLTNRSWRIE-HPGISFVWRPQSPVCKA-------------------------------------LGVDRQREYQ 43 (256)
T ss_pred CcCCCcCcCCeEEEE-eCCccEEEeeCCccccc-------------------------------------ccCcHHHHHH
Confidence 467788889999987 47889999975543211 0134556777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCCh--------HH-------Hhhc-----
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDC--------ES-------LEAF----- 150 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~--------~~-------~~~~----- 150 (864)
.++.+... .+ .|+++......++|||++|.++... .. +...
T Consensus 44 ~l~~l~~~------------------g~-~P~~i~~~~~~~v~e~i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~ 104 (256)
T TIGR02721 44 ILQALSAL------------------GL-APKPILVNEHWLLVEWLEGEVITLDQFVALDLLLELAALLHQLHSQPRFGY 104 (256)
T ss_pred HHHHHHhc------------------CC-CCceEEEeCCEEEEEeccCcccccccccCchhHHHHHHHHHHHhCCCCCCC
Confidence 77776541 12 5888875567899999999887642 00 0000
Q ss_pred CCCHH-HHHHH---H--------HHHHHHHHH--------hcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 151 GVNKQ-KVVEE---I--------TRAYAHQIY--------VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 151 ~~~~~-~l~~~---~--------~~~~l~~i~--------~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+.. .+... + ....++.+. ...++|+|+||+||+++.+ + +.||||..++.=++
T Consensus 105 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~~~--~-~~lIDwE~a~~gdp 178 (256)
T TIGR02721 105 PLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVTPQ--G-LKLIDWEYASDGDI 178 (256)
T ss_pred CCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEeCC--C-CEEEeccccCcCCH
Confidence 01111 11110 0 001122221 2369999999999999854 4 89999998886554
|
Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function. |
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=4.4e-05 Score=78.08 Aligned_cols=149 Identities=14% Similarity=0.145 Sum_probs=96.0
Q ss_pred ccccccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 6 MDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 6 ~~fd~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.+|+---+.|+.+.|++-.+ +|+.+=||-|.-.+...+ ..|. -+--|
T Consensus 19 ~wve~pN~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~----------------r~P~---------------g~ptf 66 (216)
T PRK09902 19 DWVEEPNYRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSV----------------RYPF---------------GRPTI 66 (216)
T ss_pred ceecCCCcCCCCcceEEEEEe-CCcEEEEEeccCcccccc----------------cCCC---------------CchHH
Confidence 345555556799999999776 677899996642222110 0011 12236
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--------cCCceEEEeecCC-cCCCChHHHhh-cCCCH-
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--------SSETVLILEFMDG-IRLNDCESLEA-FGVNK- 154 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--------~~~~vLvmE~i~G-~~L~~~~~~~~-~~~~~- 154 (864)
.+|..+++++++. .+.||++.. .-+.+||+|-++| .+|.++..... ...+.
T Consensus 67 ~rE~~~L~~L~~~------------------GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~ 128 (216)
T PRK09902 67 VREVAVIKELERA------------------GVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDE 128 (216)
T ss_pred HHHHHHHHHHHHc------------------CCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchH
Confidence 7788899998773 355777764 1236899999987 46766632111 11121
Q ss_pred --HHHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 155 --QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 155 --~~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+...+.+ .+.++|..|+.|+||-|-||+++.+++-.+.||||--++..
T Consensus 129 ~k~~il~~va~-~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 129 VRQAMLKAVAL-AFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR 180 (216)
T ss_pred HHHHHHHHHHH-HHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence 244444444 37899999999999999999998552223999999866543
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.00 E-value=1e-05 Score=89.70 Aligned_cols=128 Identities=17% Similarity=0.168 Sum_probs=72.8
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+-||-|-|+.|+.|... +.+-||+||++-.- .+.+.... |
T Consensus 83 ~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq--------------------------------hYtEaAlD------E 124 (590)
T KOG1290|consen 83 QRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ--------------------------------HYTEAALD------E 124 (590)
T ss_pred EEeccccccceeEEEeeccCCeEEEEEEEehhh--------------------------------HHHHHHHH------H
Confidence 367999999999999975 67899999987311 11111112 2
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-------c-CCceEEEeecCCcCCCChHHH-hhcCCCHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------S-SETVLILEFMDGIRLNDCESL-EAFGVNKQKVVE 159 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~-~~~vLvmE~i~G~~L~~~~~~-~~~~~~~~~l~~ 159 (864)
.+-+.+++..= ..+...-+|-+++. . ...+||.|++ |..|-.+... .-.|+....+-+
T Consensus 125 IklL~~v~~~D------------p~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~ 191 (590)
T KOG1290|consen 125 IKLLQQVREGD------------PNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKE 191 (590)
T ss_pred HHHHHHHHhcC------------CCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHH
Confidence 22333333210 00111122333332 2 2356999988 6555554332 223444433333
Q ss_pred HHHHHH--HHHHH-hcCeeccCCCCCCeEEcc
Q 002927 160 EITRAY--AHQIY-VDGFFNGDPHPGNFLVSK 188 (864)
Q Consensus 160 ~~~~~~--l~~i~-~~G~~H~D~hPgNIlv~~ 188 (864)
.+.+++ |..+| +.||||-|+||+|||+..
T Consensus 192 I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~ 223 (590)
T KOG1290|consen 192 ICRQVLTGLDYLHRECGIIHTDLKPENVLLCS 223 (590)
T ss_pred HHHHHHHHHHHHHHhcCccccCCCcceeeeec
Confidence 332322 67777 579999999999999964
|
|
| >PRK12396 5-methylribose kinase; Reviewed | Back alignment and domain information |
|---|
Probab=97.96 E-value=2e-05 Score=87.92 Aligned_cols=52 Identities=23% Similarity=0.501 Sum_probs=42.8
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEe--cccccccChHHHHHHHHHHHHHHhCCH
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLD--FGLTKKLSSSMKQALAKMFFAAAEGDH 225 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiD--FG~~~~l~~~~r~~~~~l~~a~~~~d~ 225 (864)
...++|+|+|||||||+++ .+++|| |+..+.+.=+.-..+..++.+.+.++.
T Consensus 226 ~~aLlHGDlHtGSI~v~~~---~~kvIDpEFAfyGP~gFDiG~~lanll~ay~~~~~ 279 (409)
T PRK12396 226 AQALIHGDLHTGSVFVKND---STKVIDPEFAFYGPMGYDIGNVMANLMFAWVNADA 279 (409)
T ss_pred chhhccCcCCCCCEEecCC---ceEEEcccccccCCcHHHHHHHHHHHHHHHhcCcc
Confidence 4678999999999999864 699999 677777777777888899988876654
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=7.2e-06 Score=102.08 Aligned_cols=74 Identities=12% Similarity=0.114 Sum_probs=51.3
Q ss_pred CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 127 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
...|++|||. +.+|.+++......++...+...+.+++ +..+|+.||+|||+||.|||+... |+++++|||++.
T Consensus 53 ~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~--~~~k~~d~~~~~ 128 (793)
T PLN00181 53 DSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSF--NHVSFIESASCS 128 (793)
T ss_pred chhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEccc--CcEEEeeccccC
Confidence 3457889987 4588877643233456666655555544 788999999999999999999743 455555555543
|
|
| >PRK05231 homoserine kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=5.3e-05 Score=83.80 Aligned_cols=33 Identities=21% Similarity=0.244 Sum_probs=26.6
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..|++|+|+||+||+++.+ ....+|||+.++.-
T Consensus 186 p~~liHgD~~~~Nil~~~~--~~~~iIDf~~~~~~ 218 (319)
T PRK05231 186 PRGVIHADLFRDNVLFEGD--RLSGFIDFYFACND 218 (319)
T ss_pred CcccCCCCCCCCcEEEECC--ceEEEEecccccCC
Confidence 4599999999999999743 33479999988753
|
|
| >PRK15442 beta-lactamase TEM; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0011 Score=71.72 Aligned_cols=36 Identities=31% Similarity=0.478 Sum_probs=33.8
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
+.|..|+++|+.|.+++++++..+++|+++||++|.
T Consensus 57 n~d~~fp~aSt~K~~i~~avl~~v~~g~l~L~~~v~ 92 (284)
T PRK15442 57 RPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIH 92 (284)
T ss_pred cCCCcccchHHHHHHHHHHHHHHHHCCCCCCCceEE
Confidence 568889999999999999999999999999999876
|
|
| >cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2') | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00045 Score=74.79 Aligned_cols=35 Identities=31% Similarity=0.509 Sum_probs=28.4
Q ss_pred cCeeccCCCCCCeEEccCCCCce-EEEecccccccChH
Q 002927 172 DGFFNGDPHPGNFLVSKDPPHRP-ILLDFGLTKKLSSS 208 (864)
Q Consensus 172 ~G~~H~D~hPgNIlv~~~~~g~i-~LiDFG~~~~l~~~ 208 (864)
..++|+|+||+|||++++ +++ .||||+++..-++.
T Consensus 185 ~~lvHGD~~~~Nilv~~~--~~~~gviDWe~a~iGDPa 220 (276)
T cd05152 185 TVLVHGDLHPGHILIDED--ARVTGLIDWTEAKVGDPA 220 (276)
T ss_pred CeeEeCCCCCCcEEEeCC--CCEEEEECcHhcccCCHH
Confidence 468999999999999853 565 69999998876553
|
MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported |
| >cd05153 HomoserineK_II Homoserine Kinase, type II | Back alignment and domain information |
|---|
Probab=97.81 E-value=9.5e-05 Score=80.79 Aligned_cols=31 Identities=23% Similarity=0.313 Sum_probs=26.6
Q ss_pred cCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 172 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 172 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
.+++|+|+||+||+++.+ +.+.||||+.+..
T Consensus 175 ~~l~HgD~~~~Nil~~~~--~~~~iIDfe~a~~ 205 (296)
T cd05153 175 RGVIHADLFRDNVLFDGD--ELSGVIDFYFACT 205 (296)
T ss_pred CcCCccCcCcccEEEeCC--ceEEEeehhhhcC
Confidence 689999999999999854 4568999998775
|
Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. |
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=97.74 E-value=7.7e-05 Score=80.20 Aligned_cols=40 Identities=28% Similarity=0.442 Sum_probs=30.3
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
...+|..|++|+|++|.|++++.+ |.+.|.||+.+.....
T Consensus 158 vA~Lh~~GlVHgdi~~~nfll~~~--G~v~Lg~F~~~~r~g~ 197 (288)
T PF14531_consen 158 VANLHSYGLVHGDIKPENFLLDQD--GGVFLGDFSSLVRAGT 197 (288)
T ss_dssp HHHHHHTTEEEST-SGGGEEE-TT--S-EEE--GGGEEETTE
T ss_pred HHHHhhcceEecccceeeEEEcCC--CCEEEcChHHHeecCc
Confidence 567799999999999999999976 9999999998776554
|
|
| >PF00768 Peptidase_S11: D-alanyl-D-alanine carboxypeptidase This is family S11 in the peptidase classification | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00023 Score=75.14 Aligned_cols=45 Identities=29% Similarity=0.432 Sum_probs=38.7
Q ss_pred ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 391 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 391 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
..|++++++ +.+..+++||+||++|+++++..+++|+|+++++|.
T Consensus 20 ~tG~iL~~k-------------n~~~~~~~ASlTKlmTa~~~le~~~~~~l~~~~~v~ 64 (240)
T PF00768_consen 20 DTGKILYSK-------------NADEKRPPASLTKLMTAYVVLEAIKNGKLSLDDKVT 64 (240)
T ss_dssp TTSEEEEEE-------------STTSEBE-GGGHHHHHHHHHHHHHHTTSSTTTCEEE
T ss_pred CCCcChhhc-------------ccCceechhhHHHHHHHHHHHHHHHcCCCCcccccc
Confidence 568888864 567889999999999999999999999999998764
|
; InterPro: IPR001967 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S11 (D-Ala-D-Ala carboxypeptidase A family, clan SE). The protein fold of the peptidase domain for members of this family resembles that of D-Ala-D-Ala-carboxypeptidase B, the type example for clan SE. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endo-peptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S27) of serine protease have been identified, these being grouped into 6 clans (SA, SB, SC, SE, SF and SG) on the basis of structural similarity and other functional evidence. Structures are known for four of the clans (SA, SB, SC and SE): these appear to be totally unrelated, suggesting at least four evolutionary origins of serine peptidases and possibly many more []. Not with standing their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C clans have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (SA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. Bacterial cell walls are complex structures containing amino acids and amino sugars, with alternating chains of N-acetylglucosamine and N-acetyl-muramic acid units linked by short peptides []: the link peptide in Escherichia coli is L-alanyl-D-isoglutamyl-L-meso-diaminopimelyl-D-alanine. The chains are usually cross-linked between the carboxyl of D-alanine and the free amino group of diaminopimelate. During the synthesis of peptidoglycan, the precursor has the described tetramer sequence with an added C-terminal D-alanine []. D-Ala-D-Ala carboxypeptidase A is involved in the metabolism of cell components []; it is synthesised with a leader peptide to target it to the cell membrane []. After cleavage of the leader peptide, the enzyme is retained in the membrane by a C-terminal anchor. There are three families of serine-type D-Ala-D-Ala peptidase, which are also known as low molecular weight penicillin-binding proteins. Family S11 contains only D-Ala-D-Ala peptidases, unlike families S12 and S13, which contain other enzymes, such as class C beta-lactamases and D-amino-peptidases []. Although these enzymes are serine proteases, some members of family S11 are partially inhibited by thiol-blocking agents [].; GO: 0009002 serine-type D-Ala-D-Ala carboxypeptidase activity, 0006508 proteolysis; PDB: 2BCF_A 1TVF_A 3MFD_B 1ES3_A 1ESI_A 1ES4_A 1ES2_A 1SKF_A 1ES5_A 1J9M_A .... |
| >COG1686 DacC D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00019 Score=80.58 Aligned_cols=45 Identities=29% Similarity=0.417 Sum_probs=40.4
Q ss_pred ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 391 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 391 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
..|++++++ +.|+.+++||+||++|+..++..++.|+|++|++|.
T Consensus 47 ~sGkVLy~k-------------n~d~~~~pASlTKlMTayv~~ea~~~gki~~~~~v~ 91 (389)
T COG1686 47 DSGKVLYSK-------------NADARRPPASLTKLMTAYVVLEALKAGKIKLDDKVT 91 (389)
T ss_pred CCCcEeecc-------------CCCCCCCccHHHHHHHHHHHHHHhhccCCCccceec
Confidence 678888753 678999999999999999999999999999999875
|
|
| >PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein [] | Back alignment and domain information |
|---|
Probab=97.72 E-value=7.3e-05 Score=81.03 Aligned_cols=72 Identities=26% Similarity=0.460 Sum_probs=46.6
Q ss_pred ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 10 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.+||+.|.|.++|+.+ .+++.+-||+........ |..|+
T Consensus 22 ~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~~~~~~----------------------------------------f~~Ea 60 (288)
T PF03881_consen 22 IEPVSGGDINEAYRLD-TDGGSYFVKVNSESGRDM----------------------------------------FEGEA 60 (288)
T ss_dssp EEEE--SSSSEEEEEE-TTS-EEEEEEEEGGGCCH----------------------------------------HHHHH
T ss_pred eEecCCCChhheEEEE-CCCccEEEEecChhhHHH----------------------------------------HHHHH
Confidence 4799999999999988 588999999876322211 56688
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCc
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGI 139 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~ 139 (864)
..++.+++. ..+.||+|+. .+..+|+|||++..
T Consensus 61 ~gL~~L~~~-----------------~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 61 EGLKALAEA-----------------NPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp HHHHHHCHT-----------------TTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred HHHHHHHhc-----------------CCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 888888552 2578999985 45679999999887
|
Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A. |
| >cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0002 Score=78.51 Aligned_cols=37 Identities=22% Similarity=0.299 Sum_probs=29.5
Q ss_pred hcCeeccCCCCCCeEEccC--CCCceEEEecccccccCh
Q 002927 171 VDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~~ 207 (864)
..++.|+|+||+|||++.+ .++.++||||..++.-++
T Consensus 178 ~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p 216 (302)
T cd05156 178 PVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYR 216 (302)
T ss_pred CceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCc
Confidence 3578999999999999852 026799999999886554
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer |
| >TIGR00938 thrB_alt homoserine kinase, Neisseria type | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00033 Score=77.04 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=27.6
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+++|+|+|++||+++.+ +...+|||+.+..-
T Consensus 186 ~~~l~HgD~~~~Nvl~~~~--~~~~vIDfd~~~~~ 218 (307)
T TIGR00938 186 PRGVIHADLFPDNVLFDGD--SVKGVIDFYFACTD 218 (307)
T ss_pred CCccCCCCCCcCcEEEECC--ceEEEeecccccCc
Confidence 3799999999999999854 55689999988653
|
Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase. |
| >COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00022 Score=78.59 Aligned_cols=29 Identities=31% Similarity=0.517 Sum_probs=25.1
Q ss_pred eeccCCCCCCeEEccCCCCc-eEEEecccccc
Q 002927 174 FFNGDPHPGNFLVSKDPPHR-PILLDFGLTKK 204 (864)
Q Consensus 174 ~~H~D~hPgNIlv~~~~~g~-i~LiDFG~~~~ 204 (864)
++|+|+||+||+++.+ .. ..+||||-++.
T Consensus 199 iIH~D~~~~NVl~d~~--~~~~g~iDFdDa~~ 228 (331)
T COG2334 199 IIHGDLHPDNVLFDDD--TDVSGFIDFDDAGY 228 (331)
T ss_pred eeecCCCccceeEcCC--CCeeeEEEcccccc
Confidence 9999999999999965 33 78999998874
|
|
| >TIGR01767 MTRK 5-methylthioribose kinase | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00021 Score=79.01 Aligned_cols=51 Identities=24% Similarity=0.438 Sum_probs=37.3
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEeccc--ccccChHHHHHHHHHHHHHHhCC
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGL--TKKLSSSMKQALAKMFFAAAEGD 224 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~--~~~l~~~~r~~~~~l~~a~~~~d 224 (864)
...++|+|+||||||+.++ .+++|||-+ .+...-+.-..+..++.+.+.++
T Consensus 191 ~~~llHGDl~~gNi~~~~~---~~~~iD~e~~~~G~~~~Dlg~~ianL~l~~~~~~ 243 (370)
T TIGR01767 191 AETLLHGDLHSGSIFVSEH---ETKVIDPEFAFYGPIGFDIGQFIANLFLNALSRD 243 (370)
T ss_pred cceeeeccCCcccEEEcCC---CCEEEcCcccccCchHhhHHHHHHHHHHHHhCcc
Confidence 3578999999999999753 588999864 44444445566777777766554
|
This enzyme is involved in the methionine salvage pathway in certain bacteria. |
| >PLN02876 acyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00023 Score=88.80 Aligned_cols=83 Identities=17% Similarity=0.278 Sum_probs=55.4
Q ss_pred ccccccccccceeeEEEEecCC---CEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 8 FVETPLATASIAQVHRATLVDG---RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 8 fd~~plasaSigqV~~A~l~~G---~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.-++++.|....+|+.+..+| ..+++|...++.... ...+
T Consensus 41 ~~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~------------------------------------~~~~ 84 (822)
T PLN02876 41 FKVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ------------------------------------SAHA 84 (822)
T ss_pred eeEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc------------------------------------cHHH
Confidence 3457889999999999887544 478888765542100 0112
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-c------CCceEEEeecCCcCCCC
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S------SETVLILEFMDGIRLND 143 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~------~~~vLvmE~i~G~~L~~ 143 (864)
+.+|++.++.+.. ...+.||+++. | +..++||||++|..+.+
T Consensus 85 ~~rE~~~l~~L~~-----------------~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~~~ 133 (822)
T PLN02876 85 VEREYQVLRALGE-----------------HTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIFVD 133 (822)
T ss_pred HHHHHHHHHHHhh-----------------cCCCCCCcEEEEecCCCcCCCceEEEEecCCcccCC
Confidence 4567777777653 23578899885 2 34689999999987653
|
|
| >PRK10001 D-alanyl-D-alanine carboxypeptidase fraction C; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00031 Score=79.22 Aligned_cols=45 Identities=22% Similarity=0.303 Sum_probs=39.0
Q ss_pred ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 391 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 391 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
..|+++|++ +.|..+++||+||++|++.++..+++|+++||+.|.
T Consensus 48 ~TG~vL~~k-------------nad~~~~pAS~TKlMTa~v~~e~i~~g~l~ldd~v~ 92 (400)
T PRK10001 48 ASGKVLAEG-------------NADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVT 92 (400)
T ss_pred CCCcChhhc-------------CcCCCcCchHHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 578888753 557789999999999999999999999999999753
|
|
| >PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0023 Score=65.44 Aligned_cols=156 Identities=15% Similarity=0.189 Sum_probs=91.1
Q ss_pred ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 10 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
..|||+|+-=-||. +++....+|||.+|.....-... .++.....+... .++ +++|.
T Consensus 6 ~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~-------~~~~k~~~~~~~--------~~~------~~~E~ 62 (199)
T PF10707_consen 6 SDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPF-------KRWLKRLRPKSR--------YRQ------NRREL 62 (199)
T ss_pred CcccccCCCceEEE--CCCCCCeEEEEEccccccccccc-------hhHHHhhcccch--------hHH------HHHHH
Confidence 47899998766664 34667899999998761111111 111111111111 112 33344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cC-CceEEEeecC---C---cCCCChHHHhhcCCCHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SS-ETVLILEFMD---G---IRLNDCESLEAFGVNKQKVVE 159 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~-~~vLvmE~i~---G---~~L~~~~~~~~~~~~~~~l~~ 159 (864)
+...++.. . .+....++|++|. ++ -.-+|+|.|. | .+|.++. ...+++. -..
T Consensus 63 ~~y~~l~~--~------------~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l--~~~~~~~--~~~ 124 (199)
T PF10707_consen 63 RYYKQLSL--R------------RGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYL--KEGGLTE--ELR 124 (199)
T ss_pred HHHHHHhh--c------------cCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHH--HcCCccH--HHH
Confidence 44444331 0 1345678899885 32 2458888873 3 2333332 3334444 444
Q ss_pred HHHHHHHHHHHhcCeeccCCCCCCeEEccCCCC--ceEEEe-cccccccC
Q 002927 160 EITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLD-FGLTKKLS 206 (864)
Q Consensus 160 ~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g--~i~LiD-FG~~~~l~ 206 (864)
.+++-+.+.+++++|+.+|++|.||++....++ +++||| ||....++
T Consensus 125 ~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~~~ip 174 (199)
T PF10707_consen 125 QALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLIDGLGEKELIP 174 (199)
T ss_pred HHHHHHHHHHHHcCCeecCCCcccEEEEecCCCceEEEEEeCCCCccccc
Confidence 555666888899999999999999999865443 599999 78655543
|
PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. |
| >PRK10793 D-alanyl-D-alanine carboxypeptidase fraction A; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00094 Score=75.55 Aligned_cols=45 Identities=22% Similarity=0.271 Sum_probs=39.6
Q ss_pred ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 391 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 391 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
..|++++++ +.|..+.+||+||++|+++++..+++|+++||++|.
T Consensus 55 ~tG~vL~~k-------------nad~~~~pASlTKlMTa~lvleai~~g~l~ld~~v~ 99 (403)
T PRK10793 55 NSGKVLAEQ-------------NADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVT 99 (403)
T ss_pred CCCcEehhc-------------CcCCCcCCHHHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 678888764 557889999999999999999999999999999874
|
|
| >KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00046 Score=73.62 Aligned_cols=192 Identities=14% Similarity=0.182 Sum_probs=115.3
Q ss_pred ccccccccccccccceeeEEEEe---cC--------CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhh--CCCCChHH
Q 002927 4 MFMDFVETPLATASIAQVHRATL---VD--------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWA--EPQYDFNP 70 (864)
Q Consensus 4 ~F~~fd~~plasaSigqV~~A~l---~~--------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~--~~~~~~~~ 70 (864)
+|+.++ --|+.|--+.|..|.- .+ -+++||||-+-.+.+.-.+|-- +..-+++. ..+.+...
T Consensus 252 vle~i~-GiIsTGKEsvvlHAY~GS~E~~~qd~ql~ptecAIKvfKTTLnEFKnRd~Y----iKDDfRFKDRFSK~NpR~ 326 (531)
T KOG2269|consen 252 VLESID-GIISTGKESVVLHAYAGSNEHGHQDPQLSPTECAIKVFKTTLNEFKNRDEY----IKDDFRFKDRFSKQNPRG 326 (531)
T ss_pred hHHhhh-hhhhcCcceEEEEeccCcccccccCcccCchHHHHHHHHHHHHHHhhhhhh----hccchhhhhhhcccCcHH
Confidence 455554 3577777788877742 11 2568888755433332222211 11111100 12345556
Q ss_pred HHHHHHHHhHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhc
Q 002927 71 IIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAF 150 (864)
Q Consensus 71 ~~~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~ 150 (864)
++.-|.+ .|..|+.|++.. ++.+|.|..-.++||||.||.-.-+..- ++...
T Consensus 327 i~~mWAE---------kEmhNL~RMq~~------------------GlpcP~vV~lkkhvLVMsFiGd~~~aAP-kLK~v 378 (531)
T KOG2269|consen 327 ILKMWAE---------KEMHNLSRMQKH------------------GLPCPQVVKLKKHVLVMSFIGDQGLAAP-KLKNV 378 (531)
T ss_pred HHHHHHH---------HHHHHHHHHHhc------------------CCCCCceeeeecceEEEEeecCCCCCCc-ccccc
Confidence 6665554 488899998762 5677888777889999999943222211 11111
Q ss_pred CC--C-HHHHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHH
Q 002927 151 GV--N-KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVA 227 (864)
Q Consensus 151 ~~--~-~~~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~ 227 (864)
.+ + +......+..+..+..++.-++|+|+.--|+|... |++.+||-..+...+....-. ++.+|-..
T Consensus 379 ~l~d~E~~~aY~q~~~~M~~lY~Ec~LVHADlSEyN~Lw~~---gKvw~IDVsQsvep~HP~~Le-------FL~RDc~N 448 (531)
T KOG2269|consen 379 ELTDDERRNAYDQVQSIMCRLYKECLLVHADLSEYNLLWTP---GKVWVIDVSQSVEPSHPRSLE-------FLTRDCQN 448 (531)
T ss_pred ccChHHHHHHHHHHHHHHHHHHHhhheeecchhhhhheecC---CceEEEechhccCCCCcchhH-------HHHHHHHH
Confidence 11 1 22333344444455556889999999999999984 699999998777655433222 34577788
Q ss_pred HHHHHHHcCCC
Q 002927 228 LLSAFAEMGLR 238 (864)
Q Consensus 228 ~~~~~~~~G~~ 238 (864)
++..+...|..
T Consensus 449 i~~FF~r~G~p 459 (531)
T KOG2269|consen 449 IITFFTRIGTP 459 (531)
T ss_pred HHHHHHhcCCC
Confidence 88888888874
|
|
| >PRK06148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0029 Score=80.37 Aligned_cols=35 Identities=29% Similarity=0.343 Sum_probs=28.3
Q ss_pred hcCeeccCCCCCCeEEccCCCCceE-EEeccccccc
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPI-LLDFGLTKKL 205 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~-LiDFG~~~~l 205 (864)
..+++|+|+|+.||+++.+.++++. |||||-+..-
T Consensus 202 p~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~~ 237 (1013)
T PRK06148 202 PAQVIHNDANDYNILVDADDGERISGLIDFGDAVHA 237 (1013)
T ss_pred CcceECCCCCcccEEEcCCCCcceEEEEECcccccc
Confidence 4789999999999999865323665 9999988763
|
|
| >PRK11397 dacD D-alanyl-D-alanine carboxypeptidase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.001 Score=74.85 Aligned_cols=44 Identities=14% Similarity=0.209 Sum_probs=38.3
Q ss_pred ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCch
Q 002927 391 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENI 447 (864)
Q Consensus 391 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v 447 (864)
..|+++|++ +.|..+++||+||++|+++++..+++|+++||+.|
T Consensus 45 ~tG~vL~~k-------------n~d~~~~pASlTKlMTa~lv~eai~~g~l~ld~~v 88 (388)
T PRK11397 45 TTGQILTAG-------------NEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIV 88 (388)
T ss_pred CCCcChhhc-------------CcCCCcCCHHHHHHHHHHHHHHHHHcCCCCCCCEE
Confidence 567887753 55778999999999999999999999999999975
|
|
| >PRK11768 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0019 Score=71.77 Aligned_cols=30 Identities=33% Similarity=0.463 Sum_probs=25.4
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
..|++|+|+||+||+++ + .+.||||+.++.
T Consensus 195 ~~~liHgD~h~~NvL~~-d---~~~iIDFDd~~~ 224 (325)
T PRK11768 195 RLLRLHGDCHPGNILWR-D---GPHFVDLDDARM 224 (325)
T ss_pred CccceecCCCchhcccc-C---CcEEEeCCCCCC
Confidence 45899999999999994 2 478999998875
|
|
| >COG3001 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0032 Score=64.57 Aligned_cols=75 Identities=19% Similarity=0.311 Sum_probs=53.3
Q ss_pred ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 10 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.+++.-|.|-+.|+-.. ...++-||+..-... --|..||
T Consensus 21 r~~v~gG~inea~~v~d-g~~~~FvK~n~~~~~----------------------------------------~~f~AEa 59 (286)
T COG3001 21 REEVSGGDINEAWRLRD-GTDPFFVKCNQREQL----------------------------------------SMFTAEA 59 (286)
T ss_pred ccccCCccccceeEeec-CCcceEEEecchhhH----------------------------------------HHHHHHH
Confidence 36777777777776653 467899997542111 1166788
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCC
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLN 142 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~ 142 (864)
..++.+++. ..+.||+|+. .+..+|||||++=.++.
T Consensus 60 ~gL~~la~s-----------------~ti~VP~vi~~G~~~~~sylVle~L~~~~~d 99 (286)
T COG3001 60 DGLELLARS-----------------NTITVPKVIAVGASRDHSYLVLEYLPTGPLD 99 (286)
T ss_pred HHHHHHHhc-----------------CCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence 888888763 2589999996 35689999999987776
|
|
| >PLN02236 choline kinase | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.004 Score=69.64 Aligned_cols=35 Identities=17% Similarity=0.376 Sum_probs=29.1
Q ss_pred cCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 172 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 172 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+.|+|++++|||++++ ++.++||||..++.-++
T Consensus 200 ~~~cH~Dl~~~Nil~~~~-~~~~~lID~Eya~~~~~ 234 (344)
T PLN02236 200 IGFCHNDLQYGNIMIDEE-TRAITIIDYEYASYNPV 234 (344)
T ss_pred ceEEeCCCCcCcEEEeCC-CCcEEEEeehhccccch
Confidence 479999999999999853 36899999999886544
|
|
| >PRK11669 pbpG D-alanyl-D-alanine endopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0046 Score=67.26 Aligned_cols=41 Identities=34% Similarity=0.486 Sum_probs=33.7
Q ss_pred ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 391 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 391 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
..|++++++ ++|..++++|+||++|+..++. ++++||++|.
T Consensus 50 ~tG~vL~~k-------------N~d~~~~pASlTKlmTalvvle----~~l~ld~~v~ 90 (306)
T PRK11669 50 NTNKVIYSS-------------NPDLVVPIASITKLMTAMVVLD----AKLPLDEKLK 90 (306)
T ss_pred CCCcEEEeE-------------CcCCCcCchHHHHHHHHHHHHH----cCCCCCCEEE
Confidence 578888853 5578899999999999999873 5789998764
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0015 Score=71.10 Aligned_cols=73 Identities=14% Similarity=0.146 Sum_probs=46.3
Q ss_pred CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCC--ceEEEeccccc
Q 002927 128 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLDFGLTK 203 (864)
Q Consensus 128 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g--~i~LiDFG~~~ 203 (864)
..+|||..-+ .+|..+.-.+. .....-.-.+++++ ..++|++|+-|||+|..|||+.-++|+ .+|+.||||+-
T Consensus 317 tlylvMkrY~-~tLr~yl~~~~--~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL 393 (598)
T KOG4158|consen 317 TLYLVMKRYR-QTLREYLWTRH--RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCL 393 (598)
T ss_pred eEEEehhcch-hhHHHHHhcCC--CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceee
Confidence 4578888764 45554432221 12221122222222 667899999999999999999755443 58899999874
|
|
| >PLN02421 phosphotransferase, alcohol group as acceptor/kinase | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0079 Score=66.91 Aligned_cols=34 Identities=21% Similarity=0.334 Sum_probs=28.3
Q ss_pred CeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 173 GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 173 G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
-+.|.|++|+|||+.++ ++++.||||..++.-++
T Consensus 183 v~CHnDl~~~NiL~~~~-~~~l~lID~EYag~nd~ 216 (330)
T PLN02421 183 VFAHNDLLSGNLMLNED-EGKLYFIDFEYGSYSYR 216 (330)
T ss_pred EEEECCCCcccEEEeCC-CCcEEEEcccccCCCcc
Confidence 38999999999999753 36899999999886554
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0017 Score=77.65 Aligned_cols=70 Identities=16% Similarity=0.224 Sum_probs=49.5
Q ss_pred EeecCCcCCCChHHHh-hc-CCCHHHHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 133 LEFMDGIRLNDCESLE-AF-GVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 133 mE~i~G~~L~~~~~~~-~~-~~~~~~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
||||++ +|..+.... .. ..+...+.+.++.. ++.+|..|+-|||+||.|+++... |.++++|||.+..+.
T Consensus 400 mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~G-v~y~h~~GiahrdlK~enll~~~~--g~lki~Dfg~~~vf~ 471 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRG-VKYLHSMGLAHRDLKLENLLVTEN--GILKIIDFGAASVFR 471 (601)
T ss_pred hhcccH-HHHHHHhcccccchhhhhHHHHHHHHH-HHHHHhcCceeccCccccEEEecC--CceEEeecCcceeec
Confidence 999999 777764322 11 11222233333322 678899999999999999999975 899999999876543
|
|
| >PRK06149 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0084 Score=76.13 Aligned_cols=34 Identities=24% Similarity=0.130 Sum_probs=27.7
Q ss_pred hcCeeccCCCCCCeEEccCCCCce---EEEecccccc
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRP---ILLDFGLTKK 204 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i---~LiDFG~~~~ 204 (864)
..|++|+|+|+.||+|+.+.++.+ .|||||-+..
T Consensus 207 ~~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~~ 243 (972)
T PRK06149 207 PLQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLVR 243 (972)
T ss_pred cccccCCCCCcccEEEcCCCCCCcceeEEEEcccchh
Confidence 689999999999999986532443 7999998764
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0014 Score=79.54 Aligned_cols=36 Identities=28% Similarity=0.252 Sum_probs=30.0
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
+.|+|+.|+.|+|+|-+||||+.= .=+.|.||-.-+
T Consensus 133 l~qcH~~gVcHGDIKsENILiTSW--NW~~LtDFAsFK 168 (1431)
T KOG1240|consen 133 LSQCHKLGVCHGDIKSENILITSW--NWLYLTDFASFK 168 (1431)
T ss_pred HHHHHHcCccccccccceEEEeee--chhhhhcccccC
Confidence 889999999999999999999853 346777887544
|
|
| >COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.012 Score=64.44 Aligned_cols=36 Identities=22% Similarity=0.351 Sum_probs=30.2
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
...++|+|.|+|||+++++ +.+.+|||+++..=++.
T Consensus 197 ~~~lvHGD~~~gNlii~~~--~~~gVlDwe~~~lGDP~ 232 (321)
T COG3173 197 PPVLVHGDYRPGNLIIDPG--RPTGVLDWELATLGDPL 232 (321)
T ss_pred CceeeeCCcccCCEEEeCC--CeeEEEeccccccCCcH
Confidence 3579999999999999965 56999999998876653
|
|
| >PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties [] | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.0057 Score=64.98 Aligned_cols=32 Identities=25% Similarity=0.249 Sum_probs=28.3
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIK 42 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~ 42 (864)
.++..|+.+.|++++..+|+++++|+..|.-.
T Consensus 8 ~~~~~g~~s~V~pv~~~dG~~avLKl~~p~~~ 39 (253)
T PF04655_consen 8 GPPAHGSSSLVVPVRRADGTPAVLKLAPPHAE 39 (253)
T ss_pred CCCCCCcceEEEEEEcCCCCeEEEEecCCccc
Confidence 57889999999999989999999999887543
|
Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0018 Score=78.54 Aligned_cols=37 Identities=32% Similarity=0.479 Sum_probs=33.8
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
++.+|..|++|||+||.|++|..- |.+++.|||+.+.
T Consensus 156 ~Eylh~ygivhrdlkpdnllIT~m--GhiKlTDfgLsk~ 192 (1205)
T KOG0606|consen 156 VEYLHSYGIVHRDLKPDNLLITSM--GHIKLTDFGLSKK 192 (1205)
T ss_pred hHhhccCCeecCCCCCCcceeeec--ccccccchhhhhh
Confidence 788999999999999999999965 9999999998664
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.0071 Score=69.98 Aligned_cols=104 Identities=20% Similarity=0.128 Sum_probs=70.2
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
.++.+|+++|+.|..+...... ..-.+.......+++.. +.++|..|++|+|+|+.||+++.+ |.+++.|||..+
T Consensus 69 ~~kl~l~ld~~rgg~lft~l~~-~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~--Ghi~~tdfglsk 145 (612)
T KOG0603|consen 69 DGKLYLILDFLRGGDLFTRLSK-EVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLE--GHIKLTDFGLSK 145 (612)
T ss_pred ccchhHhhhhcccchhhhcccc-CCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeeccc--CccccCCchhhh
Confidence 6788999999999776543221 11122333333333333 788899999999999999999966 999999999988
Q ss_pred ccChHHHHHHHHHHHHHHhCCHHHHHHHHHHcCCCcCCCc
Q 002927 204 KLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDV 243 (864)
Q Consensus 204 ~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~G~~~~~~~ 243 (864)
.+-+.... +++++.++..+.. |.....|-
T Consensus 146 e~v~~~~~----------cgt~eymApEI~~-gh~~a~D~ 174 (612)
T KOG0603|consen 146 EAVKEKIA----------CGTYEYRAPEIIN-GHLSAADW 174 (612)
T ss_pred HhHhhhhc----------ccchhhhhhHhhh-ccCCcccc
Confidence 77655444 5566555555555 44333343
|
|
| >PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2 | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.018 Score=59.59 Aligned_cols=34 Identities=26% Similarity=0.377 Sum_probs=22.2
Q ss_pred cCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 172 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 172 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+.|.|++|+|||+.. .++++.||||-.++.-+
T Consensus 143 ~v~cHnDl~~~Nil~~~-~~~~~~lIDfEya~~n~ 176 (211)
T PF01633_consen 143 LVFCHNDLNPGNILINN-KDGEVKLIDFEYAGYND 176 (211)
T ss_dssp EEEE-S--SGGGEEETS-SSSCEEE--GTT-EEEE
T ss_pred ceEeeccCccccEEecc-CCCeEEEecHHHHhhcc
Confidence 57899999999999932 23899999999888644
|
7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B .... |
| >PRK10271 thiK thiamine kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.058 Score=54.53 Aligned_cols=34 Identities=21% Similarity=0.169 Sum_probs=28.6
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..-..|+|+||+||++.++ .++||||+.++.-++
T Consensus 76 ~~~p~H~D~~~~N~~~~~~---~~~lIDwe~a~~gDp 109 (188)
T PRK10271 76 RLAPLHMDVHAGNLVHSAS---GLRLIDWEYAGDGDI 109 (188)
T ss_pred CeeeecCCCCCccEEEECC---CEEEEeCCcccCCCH
Confidence 3467999999999999753 499999999987666
|
|
| >PTZ00384 choline kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.14 Score=57.94 Aligned_cols=30 Identities=20% Similarity=0.152 Sum_probs=25.4
Q ss_pred cCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 172 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 172 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
..+.|-|++++||+... +++.||||=.++.
T Consensus 227 ~VfCHNDL~~gNIL~~~---~~l~lID~EYA~~ 256 (383)
T PTZ00384 227 VLFCHNDLFFTNILDFN---QGIYFIDFDFAGF 256 (383)
T ss_pred eeeeeccCCcccEEecC---CCEEEEEeccccC
Confidence 58899999999999753 4799999987764
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.0051 Score=69.81 Aligned_cols=76 Identities=20% Similarity=0.286 Sum_probs=52.0
Q ss_pred ceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHHHH---h-cCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 129 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY---V-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~i~---~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
.++.|++|+-.+|.||+.-...+..+. . .+..-..+|+- + .|.+|+|+||.||+...+ .+++|.|||++..
T Consensus 331 lyI~Mn~c~~~tledWl~rr~~~e~~s-~--s~~~~~~~q~~~~~~yk~~ihrdlkp~nif~~~d--~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 331 LYIQMNLCEKETLEDWLRRRRTGEERS-L--SLMLDIFKQIAPAVEYKGLIHRDLKPSNIFFSDD--DQLKIGDFGLVTS 405 (516)
T ss_pred hhhhhhhhhhhhHHHHhhCCCcccccc-h--hHHHHHHHhhccchhhccchhhhccccccccccc--hhhhhhhhhheee
Confidence 568999999999999965333222111 1 11111122221 1 899999999999999865 6899999999988
Q ss_pred cChHH
Q 002927 205 LSSSM 209 (864)
Q Consensus 205 l~~~~ 209 (864)
.+...
T Consensus 406 ~~~~~ 410 (516)
T KOG1033|consen 406 QDKDE 410 (516)
T ss_pred cccCC
Confidence 76554
|
|
| >PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2 | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.37 Score=49.27 Aligned_cols=25 Identities=28% Similarity=0.379 Sum_probs=22.6
Q ss_pred cccccccc-eeeEEEEecCCCEEEEEE
Q 002927 11 TPLATASI-AQVHRATLVDGRQVVVKV 36 (864)
Q Consensus 11 ~plasaSi-gqV~~A~l~~G~~VAVKv 36 (864)
+=||.|+- |.|++++. +|+.+|||+
T Consensus 43 efLg~g~~~~~V~kv~I-~g~~YALKl 68 (207)
T PF13095_consen 43 EFLGHGSHDGYVFKVEI-DGRIYALKL 68 (207)
T ss_pred eecCCCCceeEEEEEEE-CCeEEEEEE
Confidence 45899999 99999997 789999998
|
|
| >PTZ00296 choline kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.31 Score=56.33 Aligned_cols=79 Identities=18% Similarity=0.253 Sum_probs=54.5
Q ss_pred cccccccccccceeeEEEEecC---------CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHH
Q 002927 7 DFVETPLATASIAQVHRATLVD---------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCK 77 (864)
Q Consensus 7 ~fd~~plasaSigqV~~A~l~~---------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 77 (864)
+++-+||..|=--++|+....+ ++.|+|||-.++....+
T Consensus 107 ~I~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lI-------------------------------- 154 (442)
T PTZ00296 107 DVRVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELY-------------------------------- 154 (442)
T ss_pred cEEEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCcccee--------------------------------
Confidence 4555889888889999998642 56899998777665332
Q ss_pred HhHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCC
Q 002927 78 EAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLN 142 (864)
Q Consensus 78 ~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~ 142 (864)
|-..|..+...+.+. . .-|+++.....+.+.||++|.++.
T Consensus 155 ------dR~~E~~v~~~ls~~------------------g-i~P~l~~~f~gg~I~efi~g~~l~ 194 (442)
T PTZ00296 155 ------NPISEFEVYKTMSKY------------------R-IAPQLLNTFSGGRIEEWLYGDPLR 194 (442)
T ss_pred ------CHHHHHHHHHHHHHC------------------C-CCCceEEEeCCCEEEEeeCCccCC
Confidence 233466666666552 0 135666655678899999998665
|
|
| >PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C) | Back alignment and domain information |
|---|
Probab=93.23 E-value=0.099 Score=53.17 Aligned_cols=83 Identities=18% Similarity=0.218 Sum_probs=54.8
Q ss_pred EEeeEEecCCceEEEeecCCcCCC-------ChHHHhhcCCCHHHHHHHHHHHHHHHHHh---cCeeccCCCCCCeEEcc
Q 002927 119 LIPEVIQSSETVLILEFMDGIRLN-------DCESLEAFGVNKQKVVEEITRAYAHQIYV---DGFFNGDPHPGNFLVSK 188 (864)
Q Consensus 119 ~vP~v~~~~~~vLvmE~i~G~~L~-------~~~~~~~~~~~~~~l~~~~~~~~l~~i~~---~G~~H~D~hPgNIlv~~ 188 (864)
++|+++.+-.++.+.||+...++. ++.. ..-..+.+++..+++++ +.+.. ..|+-+|.+|+|+-|++
T Consensus 21 ~~pk~lG~CG~~~v~E~~~~~~~~~~~~~l~~~~~--~~w~~R~~iA~~lL~~l-~~l~~~~~~~~~lcDv~~~nfgv~~ 97 (188)
T PF12260_consen 21 PFPKLLGSCGRFYVVEYVGAGSLYGIYRPLSQFLQ--SPWEQRAKIALQLLELL-EELDHGPLGFFYLCDVSPDNFGVND 97 (188)
T ss_pred CCCCeeeECCCEEEEEeecCccccccccccccccc--cCHHHHHHHHHHHHHHH-HHHhcCCCCcEEEeecchHHeEEeC
Confidence 789999855567799999876543 3211 00011334445455443 33322 45888999999999996
Q ss_pred CCCCceEEEecccccccC
Q 002927 189 DPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 189 ~~~g~i~LiDFG~~~~l~ 206 (864)
+ |+++++|...+...+
T Consensus 98 ~--~~lk~iDld~v~~~~ 113 (188)
T PF12260_consen 98 D--GRLKLIDLDDVFVED 113 (188)
T ss_pred C--CcEEEEechhcchhH
Confidence 5 899999999877654
|
Proteins in this uncharacterised family are described as transmembrane proteins. |
| >smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain | Back alignment and domain information |
|---|
Probab=92.83 E-value=0.096 Score=53.62 Aligned_cols=37 Identities=24% Similarity=0.295 Sum_probs=30.5
Q ss_pred hcCeeccCCCCCCeEEccCCCC---ceEEEecccccccCh
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPH---RPILLDFGLTKKLSS 207 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g---~i~LiDFG~~~~l~~ 207 (864)
...+.|+|+|++|||+..+++| .+.|+||..++.-++
T Consensus 119 ~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p 158 (196)
T smart00587 119 FNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSP 158 (196)
T ss_pred ceEEeeCCCCccceeeccCCCCCccceEEEecccCCcCCh
Confidence 4689999999999999865334 689999999887665
|
subfamily of choline kinases |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 864 | ||||
| 3zyt_A | 372 | Structure Determination Of Esta From Arthrobacter N | 2e-17 | ||
| 2qmi_A | 447 | Structure Of The Octameric Penicillin-Binding Prote | 2e-12 | ||
| 1ci9_A | 392 | Dfp-Inhibited Esterase Estb From Burkholderia Gladi | 2e-12 | ||
| 1l0f_A | 358 | X-Ray Crystal Structure Of Ampc N152h Mutant Beta-L | 2e-08 | ||
| 1i5q_A | 358 | Crystal Structure Of The E. Coli Ampc Beta-Lactamas | 4e-08 | ||
| 3iwi_A | 361 | X-Ray Crystal Structure Of The Extended-Spectrum Am | 4e-08 | ||
| 1fsw_A | 358 | Ampc Beta-Lactamase From E. Coli Complexed With Inh | 4e-08 | ||
| 3iwq_B | 358 | X-Ray Crystal Structure Of The Extended-Spectrum Am | 5e-08 | ||
| 2p9v_A | 358 | Structure Of Ampc Beta-Lactamase With Cross-Linked | 5e-08 | ||
| 2bls_A | 358 | Ampc Beta-Lactamase From Escherichia Coli Length = | 5e-08 | ||
| 1pi4_A | 358 | Structure Of N289a Mutant Of Ampc In Complex With S | 5e-08 | ||
| 3ixd_A | 358 | X-Ray Crystal Structure Of The Extended-Spectrum Am | 5e-08 | ||
| 2ffy_B | 358 | Ampc Beta-Lactamase N289a Mutant In Complex With A | 5e-08 | ||
| 3iwo_A | 358 | X-Ray Crystal Structure Of The Extended-Spectrum Am | 5e-08 | ||
| 2wzx_A | 371 | Amp-C Beta-Lactamase (Pseudomonas Aeruginosa)in Com | 7e-08 | ||
| 3s1y_A | 371 | Amp-C Beta-Lactamase (Pseudomonas Aeruginosa) In Co | 7e-08 | ||
| 3fkv_A | 358 | Ampc K67r Mutant Complexed With Benzo(B)thiophene-2 | 9e-08 | ||
| 1l0e_A | 358 | X-Ray Crystal Structure Of Ampc K67q Mutant Beta-La | 1e-07 | ||
| 1kvl_A | 358 | X-Ray Crystal Structure Of Ampc S64g Mutant Beta-La | 2e-07 | ||
| 1l0d_A | 358 | X-Ray Crystal Structure Of Ampc S64d Mutant Beta-La | 2e-07 | ||
| 1bls_A | 361 | Crystallographic Structure Of A Phosphonate Derivat | 2e-07 | ||
| 2q9m_A | 359 | 4-Substituted Trinems As Broad Spectrum-Lactamase I | 2e-07 | ||
| 1rgz_A | 363 | Enterobacter Cloacae Gc1 Class C Beta-Lactamase Com | 2e-07 | ||
| 1gce_A | 364 | Structure Of The Beta-Lactamase Of Enterobacter Clo | 2e-07 | ||
| 3ixg_A | 358 | X-Ray Crystal Structure Of The Extended-Spectrum Am | 2e-07 | ||
| 3s4x_A | 367 | Crystal Structure Of The Asn152gly Mutant Of P99 Be | 3e-07 | ||
| 2qz6_A | 358 | First Crystal Structure Of A Psychrophile Class C B | 4e-07 | ||
| 1y54_A | 361 | Crystal Structure Of The Native Class C Beta-Lactam | 5e-07 | ||
| 1hvb_A | 349 | Crystal Structure Of Streptomyces R61 Dd-Peptidase | 5e-07 | ||
| 1sde_A | 347 | Toward Better Antibiotics: Crystal Structure Of D-A | 5e-07 | ||
| 1s6r_A | 359 | 908r Class C Beta-Lactamase Bound To Iodo-Acetamido | 6e-07 | ||
| 2zj9_A | 355 | X-Ray Crystal Structure Of Ampc Beta-Lactamase (Amp | 6e-07 | ||
| 2zc7_A | 359 | Crystal Structure Of Class C Beta-Lactamase Act-1 L | 6e-07 | ||
| 1fr1_A | 361 | Refined Crystal Structure Of Beta-Lactamase From Ci | 1e-06 | ||
| 1fcm_A | 358 | Crystal Structure Of The E.Coli Ampc Beta-Lactamase | 1e-06 | ||
| 2dns_A | 363 | The Crystal Structure Of D-Amino Acid Amidase From | 1e-06 | ||
| 1zc2_A | 361 | Crystal Structure Of Plasmid-Encoded Class C Beta-L | 2e-06 | ||
| 1rgy_A | 360 | Citrobacter Freundii Gn346 Class C Beta-Lactamase C | 2e-06 | ||
| 3ozh_A | 351 | Crystal Structure Of Beta-LactamaseD-Alanine Carbox | 6e-06 | ||
| 3o3v_A | 335 | Crystal Structure Of Clbp Peptidase Domain Length = | 1e-05 | ||
| 4gdn_A | 342 | Structure Of Fmta-Like Protein Length = 342 | 3e-05 | ||
| 3hlc_A | 432 | Simvastatin Synthase (Lovd) From Aspergillus Terreu | 6e-05 | ||
| 3hl9_A | 432 | Simvastatin Synthase (Lovd) From Aspergillus Terreu | 1e-04 | ||
| 3hle_A | 432 | Simvastatin Synthase (Lovd), From Aspergillus Terre | 1e-04 |
| >pdb|3ZYT|A Chain A, Structure Determination Of Esta From Arthrobacter Nitroguajacolicus Rue61a Length = 372 | Back alignment and structure |
|
| >pdb|2QMI|A Chain A, Structure Of The Octameric Penicillin-Binding Protein Homologue From Pyrococcus Abyssi Length = 447 | Back alignment and structure |
|
| >pdb|1CI9|A Chain A, Dfp-Inhibited Esterase Estb From Burkholderia Gladioli Length = 392 | Back alignment and structure |
|
| >pdb|1L0F|A Chain A, X-Ray Crystal Structure Of Ampc N152h Mutant Beta-Lactamase Length = 358 | Back alignment and structure |
|
| >pdb|1I5Q|A Chain A, Crystal Structure Of The E. Coli Ampc Beta-Lactamase Mutant N152a Covalently Acylated With The Inhibitory Beta-Lactam, Moxalactam Length = 358 | Back alignment and structure |
|
| >pdb|3IWI|A Chain A, X-Ray Crystal Structure Of The Extended-Spectrum Ampc Omega Loop Insertion (H210aaa) Mutant Beta-Lactamase At 1.64 Angstrom Resolution Length = 361 | Back alignment and structure |
|
| >pdb|1FSW|A Chain A, Ampc Beta-Lactamase From E. Coli Complexed With Inhibitor Cephalothinboronic Acid Length = 358 | Back alignment and structure |
|
| >pdb|3IWQ|B Chain B, X-Ray Crystal Structure Of The Extended-Spectrum Ampc E219k Mutant Beta-Lactamase At 1.84 Angstrom Resolution Length = 358 | Back alignment and structure |
|
| >pdb|2P9V|A Chain A, Structure Of Ampc Beta-Lactamase With Cross-Linked Active Site After Exposure To Small Molecule Inhibitor Length = 358 | Back alignment and structure |
|
| >pdb|2BLS|A Chain A, Ampc Beta-Lactamase From Escherichia Coli Length = 358 | Back alignment and structure |
|
| >pdb|1PI4|A Chain A, Structure Of N289a Mutant Of Ampc In Complex With Sm3, A Phenylglyclboronic Acid Bearing The Cephalothin R1 Side Chain Length = 358 | Back alignment and structure |
|
| >pdb|3IXD|A Chain A, X-Ray Crystal Structure Of The Extended-Spectrum Ampc V298e Mutant Beta-Lactamase At 2.64 Angstrom Resolution Length = 358 | Back alignment and structure |
|
| >pdb|2FFY|B Chain B, Ampc Beta-Lactamase N289a Mutant In Complex With A Boronic Acid Deacylation Transition State Analog Compound Sm3 Length = 358 | Back alignment and structure |
|
| >pdb|3IWO|A Chain A, X-Ray Crystal Structure Of The Extended-Spectrum Ampc Y221g Mutant Beta-Lactamase At 1.90 Angstrom Resolution Length = 358 | Back alignment and structure |
|
| >pdb|2WZX|A Chain A, Amp-C Beta-Lactamase (Pseudomonas Aeruginosa)in Complex With Compound M-02 Length = 371 | Back alignment and structure |
|
| >pdb|3S1Y|A Chain A, Amp-C Beta-Lactamase (Pseudomonas Aeruginosa) In Complex With A Beta- Lactamase Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|3FKV|A Chain A, Ampc K67r Mutant Complexed With Benzo(B)thiophene-2-Boronic Acid (Bzb) Length = 358 | Back alignment and structure |
|
| >pdb|1L0E|A Chain A, X-Ray Crystal Structure Of Ampc K67q Mutant Beta-Lactamase Length = 358 | Back alignment and structure |
|
| >pdb|1KVL|A Chain A, X-Ray Crystal Structure Of Ampc S64g Mutant Beta-Lactamase In Complex With Substrate And Product Forms Of Cephalothin Length = 358 | Back alignment and structure |
|
| >pdb|1L0D|A Chain A, X-Ray Crystal Structure Of Ampc S64d Mutant Beta-Lactamase Length = 358 | Back alignment and structure |
|
| >pdb|1BLS|A Chain A, Crystallographic Structure Of A Phosphonate Derivative Of The Enterobacter Cloacae P99 Cephalosporinase: Mechanistic Interpretation Of A Beta-Lactamase Transition State Analog Length = 361 | Back alignment and structure |
|
| >pdb|2Q9M|A Chain A, 4-Substituted Trinems As Broad Spectrum-Lactamase Inhibitors: Structure-Based Design, Synthesis And Biological Activity Length = 359 | Back alignment and structure |
|
| >pdb|1RGZ|A Chain A, Enterobacter Cloacae Gc1 Class C Beta-Lactamase Complexed With Transition-State Analog Of Cefotaxime Length = 363 | Back alignment and structure |
|
| >pdb|1GCE|A Chain A, Structure Of The Beta-Lactamase Of Enterobacter Cloacae Gc1 Length = 364 | Back alignment and structure |
|
| >pdb|3IXG|A Chain A, X-Ray Crystal Structure Of The Extended-Spectrum Ampc T70i Mutant Beta-Lactamase With And Without Benzo(B)thiophene-2- Boronic Acid Bound At 2.14 Angstrom Resolution Length = 358 | Back alignment and structure |
|
| >pdb|3S4X|A Chain A, Crystal Structure Of The Asn152gly Mutant Of P99 Beta-lactamase Length = 367 | Back alignment and structure |
|
| >pdb|2QZ6|A Chain A, First Crystal Structure Of A Psychrophile Class C Beta- Lactamase Length = 358 | Back alignment and structure |
|
| >pdb|1Y54|A Chain A, Crystal Structure Of The Native Class C Beta-Lactamase From Enterobacter Cloacae 908r Complexed With Brl42715 Length = 361 | Back alignment and structure |
|
| >pdb|1HVB|A Chain A, Crystal Structure Of Streptomyces R61 Dd-Peptidase Complexed With A Novel Cephalosporin Analog Of Cell Wall Peptidoglycan Length = 349 | Back alignment and structure |
|
| >pdb|1SDE|A Chain A, Toward Better Antibiotics: Crystal Structure Of D-Ala-D-Ala Peptidase Inhibited By A Novel Bicyclic Phosphate Inhibitor Length = 347 | Back alignment and structure |
|
| >pdb|1S6R|A Chain A, 908r Class C Beta-Lactamase Bound To Iodo-Acetamido-Phenyl Boronic Acid Length = 359 | Back alignment and structure |
|
| >pdb|2ZJ9|A Chain A, X-Ray Crystal Structure Of Ampc Beta-Lactamase (Ampc(D)) From An Escherichia Coli With A Tripeptide Deletion (Gly286 Ser287 Asp288) On The H10 Helix Length = 355 | Back alignment and structure |
|
| >pdb|2ZC7|A Chain A, Crystal Structure Of Class C Beta-Lactamase Act-1 Length = 359 | Back alignment and structure |
|
| >pdb|1FR1|A Chain A, Refined Crystal Structure Of Beta-Lactamase From Citrobacter Freundii Indicates A Mechanism For Beta-Lactam Hydrolysis Length = 361 | Back alignment and structure |
|
| >pdb|1FCM|A Chain A, Crystal Structure Of The E.Coli Ampc Beta-Lactamase Mutant Q120lY150E Covalently Acylated With The Inhibitory Beta-Lactam, Cloxacillin Length = 358 | Back alignment and structure |
|
| >pdb|2DNS|A Chain A, The Crystal Structure Of D-Amino Acid Amidase From Ochrobactrum Anthropi Sv3 Complexed With D-Phenylalanine Length = 363 | Back alignment and structure |
|
| >pdb|1ZC2|A Chain A, Crystal Structure Of Plasmid-Encoded Class C Beta-Lactamase Cmy-2 Complexed With Citrate Molecule Length = 361 | Back alignment and structure |
|
| >pdb|1RGY|A Chain A, Citrobacter Freundii Gn346 Class C Beta-Lactamase Complexed With Transition-State Analog Of Cefotaxime Length = 360 | Back alignment and structure |
|
| >pdb|3OZH|A Chain A, Crystal Structure Of Beta-LactamaseD-Alanine Carboxypeptidase From Yersinia Pestis Length = 351 | Back alignment and structure |
|
| >pdb|3O3V|A Chain A, Crystal Structure Of Clbp Peptidase Domain Length = 335 | Back alignment and structure |
|
| >pdb|4GDN|A Chain A, Structure Of Fmta-Like Protein Length = 342 | Back alignment and structure |
|
| >pdb|3HLC|A Chain A, Simvastatin Synthase (Lovd) From Aspergillus Terreus, S5 Mutant, Unliganded Length = 432 | Back alignment and structure |
|
| >pdb|3HL9|A Chain A, Simvastatin Synthase (Lovd) From Aspergillus Terreus, Unliganded Length = 432 | Back alignment and structure |
|
| >pdb|3HLE|A Chain A, Simvastatin Synthase (Lovd), From Aspergillus Terreus, S5 Mutant, S76a Mutant, Complex With Monacolin J Acid Length = 432 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 864 | |||
| 2qz6_A | 358 | Beta-lactamase; psychrophIle, cold adaptation, ant | 3e-32 | |
| 2wzx_A | 371 | Beta-lactamase; inhibitor, hydrolase, antibiotic r | 7e-32 | |
| 2ffy_A | 358 | Beta-lactamase; AMPC, deacylation, transition stat | 2e-31 | |
| 2drw_A | 363 | DAA, D-amino acid amidase; penicillin recognizing | 2e-30 | |
| 1zkj_A | 359 | CMY-10, extended-spectrum beta-lactamase; plasmid, | 6e-30 | |
| 1ci9_A | 392 | ESTB, protein (carboxylesterase); hydrolase, cabox | 1e-29 | |
| 3o3v_A | 335 | Beta-lactamase, CLBP protein; alpha/beta, disulfid | 5e-28 | |
| 3rju_A | 351 | Beta-lactamase/D-alanine carboxypeptidase; structu | 1e-27 | |
| 1yqs_A | 349 | D-alanyl-D-alanine carboxypeptidase; cell well bio | 1e-26 | |
| 2qmi_A | 447 | PBP related beta-lactamase; PAB87, octamer, LU-HPD | 2e-26 | |
| 1ei5_A | 520 | D-aminopeptidase, DAP; penicillin binding protein, | 1e-25 | |
| 3tg9_A | 356 | Penicillin-binding protein; structural genomics, P | 1e-24 | |
| 3hlc_A | 432 | Transesterase, LOVD; alpha/beta hydrolase fold, tr | 3e-23 | |
| 2dcf_A | 392 | 6-aminohexanoate-dimer hydrolase; HET: ACA MES; 1. | 2e-20 | |
| 4gb7_A | 422 | 6-aminohexanoate-dimer hydrolase; structural genom | 2e-19 | |
| 3i7j_A | 280 | Beta-lactamase MB2281C; alpha-beta protein., struc | 2e-17 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-13 |
| >2qz6_A Beta-lactamase; psychrophIle, cold adaptation, antibiotic resistance, hydrolase, periplasm; 2.26A {Pseudomonas fluorescens} Length = 358 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 3e-32
Identities = 41/185 (22%), Positives = 88/185 (47%), Gaps = 8/185 (4%)
Query: 363 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFS 422
+D+ + + L I G+ V ++G+ + G+ + +P+ ++LF + S
Sbjct: 2 TDIRQVVDSTVEPLMQQQDIAGLSVAVIQNGKAQY-FNYGVANKDSKQPITENTLFEIGS 60
Query: 423 VTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLS 482
V+K TA + + + NGKLKL + + P + + D I + ++ +T+G +
Sbjct: 61 VSKTFTATLAGYALANGKLKLSDPASQYLPALRGDKFDHISLLNLGTYTAGGLPLQFPEE 120
Query: 483 SENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEG 542
S+N + ++ P PG ++LY S G L G + ++ G+ F++++E+
Sbjct: 121 SDNT------GKMISYYQHWKPAFAPGTQRLYSNPSIG-LFGHLAAQSLGQPFEKLMEQT 173
Query: 543 IIQPL 547
++ L
Sbjct: 174 VLPKL 178
|
| >2wzx_A Beta-lactamase; inhibitor, hydrolase, antibiotic resistance; HET: ZX0; 1.40A {Pseudomonas aeruginosa} PDB: 2wzz_A* 3s1y_A* 3s22_A* Length = 371 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 7e-32
Identities = 43/184 (23%), Positives = 83/184 (45%), Gaps = 7/184 (3%)
Query: 364 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSV 423
++A + + + I G+ V GE S G+ + D R V P++LF + SV
Sbjct: 7 RLKALVDAAVQPVMKANDIPGLAVAISLKGEPHY-FSYGLASKEDGRRVTPETLFEIGSV 65
Query: 424 TKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSS 483
+K TA + + + K++L++ + WP + + D I + + +T+G + S
Sbjct: 66 SKTFTATLAGYALTQDKMRLDDRASQHWPALQGSRFDGISLLDLATYTAGGLPLQFPDSV 125
Query: 484 ENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGI 543
+ D + + P PG ++LY S G L G + R+ G+ F+ ++E+ +
Sbjct: 126 QK-----DQAQIRDYYRQWQPTYAPGSQRLYSNPSIG-LFGYLAARSLGQPFERLMEQQV 179
Query: 544 IQPL 547
L
Sbjct: 180 FPAL 183
|
| >2ffy_A Beta-lactamase; AMPC, deacylation, transition state, boronic acid, hydrolase; HET: SM3; 1.07A {Escherichia coli} SCOP: e.3.1.1 PDB: 1pi5_A* 1pi4_A* 2hds_A* 1c3b_A* 1fco_A* 1ga9_A* 1iem_A* 1kds_A* 1kdw_A* 1ke0_A* 1ke3_A* 1iel_A 1kvm_A* 1l2s_A* 1ll5_A* 1ll9_A* 1llb_A* 1mxo_A* 1my8_A* 1xgi_A* ... Length = 358 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 2e-31
Identities = 53/304 (17%), Positives = 103/304 (33%), Gaps = 46/304 (15%)
Query: 364 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSV 423
+ + + L KI G+ V G+ + G +PV +LF + SV
Sbjct: 4 QINDIVHRTITPLIEQQKIPGMAVAVIYQGKPYY-FTWGYADIAKKQPVTQQTLFELGSV 62
Query: 424 TKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSS 483
+K T + + G++KL + WPE + + I + H+ +T+G L
Sbjct: 63 SKTFTGVLGGDAIARGEIKLSDPTTKYWPELTAKQWNGITLLHLATYTAGG------LPL 116
Query: 484 ENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGI 543
+ P + + L P PG ++LY S G L G + + SG F++ ++ +
Sbjct: 117 QVPDEVKSSSDLLRFYQNWQPAWAPGTQRLYANSSIG-LFGALAVKPSGLSFEQAMQTRV 175
Query: 544 IQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAA 603
QPL ++ +I +PP E A + +
Sbjct: 176 FQPLKLN-HTWINVPPAEEKNYA---------------------------WGYREGKAVH 207
Query: 604 ITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIP 663
++P + A + +AR+ + + L + +
Sbjct: 208 VSPGALDA--------EAYGVKSTIEDMARWVQSNLKPLDINE--KTLQQGIQLAQSRYW 257
Query: 664 KFPS 667
+
Sbjct: 258 QTGD 261
|
| >2drw_A DAA, D-amino acid amidase; penicillin recognizing protein, D-stereospecific, hydrophobic, hydrolase; 2.10A {Ochrobactrum anthropi} SCOP: e.3.1.1 PDB: 2dns_A 2efu_A* 2efx_A* Length = 363 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 2e-30
Identities = 57/285 (20%), Positives = 99/285 (34%), Gaps = 20/285 (7%)
Query: 363 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFS 422
SD+ ++ L + G ++G+ + GE +G +++ P+ D LF + S
Sbjct: 2 SDLNNAIQGILDDHVARG-VVGVSLALCLPGEETSLYQSGYADKFNKMPMTGDHLFRIAS 60
Query: 423 VTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLS 482
TK A LH LV +G + L+E I +P+ + V +LNH SGL + +
Sbjct: 61 CTKSFIATGLHLLVQDGTVDLDEPITRWFPDLP--KAAQMPVRILLNHRSGLPDFETSM- 117
Query: 483 SENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGW-LCGGIIERASGKKFQEILEE 541
E ++ + EP Y + G+ L G II +GK + + L
Sbjct: 118 PMISDKSWTAQEIVDFSFRHGVQKEPWHG--MEYSNTGYVLAGMIIAHETGKPYSDHLRS 175
Query: 542 GIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQL 601
I PL + R A G + +
Sbjct: 176 RIFAPLGMKDTWVGTHETFPIEREA------------RGYMHAAADDENPQWDVSGAGDP 223
Query: 602 AAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPP 646
+ A A + + R + ++ AL DG ++
Sbjct: 224 VDGVWDSTEWFPLSGA-NAAGDMVSTPRDIVKFLNALFDGRILDQ 267
|
| >1zkj_A CMY-10, extended-spectrum beta-lactamase; plasmid, class C, hydrolase; 1.55A {Enterobacter aerogenes} Length = 359 | Back alignment and structure |
|---|
Score = 121 bits (304), Expect = 6e-30
Identities = 37/184 (20%), Positives = 77/184 (41%), Gaps = 8/184 (4%)
Query: 364 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSV 423
+ + + L + +I G+ V KDG+ + G+ R V +LF + SV
Sbjct: 8 PLRPVVDASIQPLLKEHRIPGMAVAVLKDGKAHY-FNYGVANRESGAGVSEQTLFEIGSV 66
Query: 424 TKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSS 483
+K +TA + + V G ++L++ + P K + D I + + +++G +
Sbjct: 67 SKTLTATLGAYAVVKGAMQLDDKASRHAPWLKGSAFDSITMGELATYSAGGLPLQFPEEV 126
Query: 484 ENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGI 543
++ ++ AP PG + Y S G L G + + + F ++E+ +
Sbjct: 127 DSS------EKMRAYYRQWAPVYSPGSHRQYSNPSIG-LFGHLAASSLKQPFAPLMEQTL 179
Query: 544 IQPL 547
+ L
Sbjct: 180 LPGL 183
|
| >1ci9_A ESTB, protein (carboxylesterase); hydrolase, caboxylesterase; HET: DFP; 1.80A {Burkholderia gladioli} SCOP: e.3.1.1 PDB: 1ci8_A* Length = 392 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 1e-29
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 28/202 (13%)
Query: 366 EAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTK 425
A+L + + +++G + GE++ + G+ R RP++ D+LF + SVTK
Sbjct: 19 AARLDAVFDQALRERRLVGAVAIVARHGEILYRRAQGLADREAGRPMREDTLFRLASVTK 78
Query: 426 GIT--AGMLHWLVDNGKLKLEENIANIWPEFK----SNGKDLIKVHHVLNHTSGL----- 474
I A + LV G+L L+ + PEF+ + L+ +HH+L HTSGL
Sbjct: 79 PIVALAVLR--LVARGELALDAPVTRWLPEFRPRLADGSEPLVTIHHLLTHTSGLGYWLL 136
Query: 475 ---------HNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGG 525
+S + + D DE L R+A + PG Y L+ L G
Sbjct: 137 EGAGSVYDRLGISDGIDLRDF----DLDENLRRLASAPLSFAPGSGWQYS-LALDVL-GA 190
Query: 526 IIERASGKKFQEILEEGIIQPL 547
++ERA+G+ ++ + QPL
Sbjct: 191 VVERATGQPLAAAVDALVAQPL 212
|
| >3o3v_A Beta-lactamase, CLBP protein; alpha/beta, disulfide bridge, hydrolase; 2.40A {Escherichia coli} Length = 335 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 5e-28
Identities = 49/307 (15%), Positives = 101/307 (32%), Gaps = 41/307 (13%)
Query: 368 KLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGI 427
+L + + + K+ + V G G+ + D+++ + S++K
Sbjct: 2 RLSTLIHQRMQEAKVPALSVSVTIKGVRQRFV-YGVADVASQKANTLDTVYELGSMSKAF 60
Query: 428 TAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDL---IKVHHVLNHTSGLHNVSVDLSSE 484
T ++ L+ G+L+ ++I PE + N + + V L HTSGL ++
Sbjct: 61 TGLVVQILIQEGRLRQGDDIITYLPEMRLNYQGKPASLTVADFLYHTSGLPFSTLARLEN 120
Query: 485 NPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGII 544
++ PG + Y ++ + G +IE +GK F E++ E +
Sbjct: 121 PM----PGSAVAQQLRNENLLFAPGAKFSYASANYD-VLGAVIENVTGKTFTEVIAERLT 175
Query: 545 QPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAI 604
QPL + A++ + D++ + K A
Sbjct: 176 QPLGMS---------------ATVAVKGDEI--------IVNKASGYKLGFGKPVLFHAP 212
Query: 605 TPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPK 664
R +PAA H + + + A +P + +P
Sbjct: 213 LA---------RNHVPAAYIHSTLPDMEIWIDAWLHRKALPATLREAMSNSWRGNSDVPL 263
Query: 665 FPSHETS 671
+
Sbjct: 264 AADNRIL 270
|
| >3rju_A Beta-lactamase/D-alanine carboxypeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE CIT; 1.50A {Yersinia pestis} PDB: 3ozh_A* Length = 351 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 1e-27
Identities = 42/188 (22%), Positives = 83/188 (44%), Gaps = 7/188 (3%)
Query: 365 VEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVT 424
+ + + + +G+ + + +V+ S G + +PDSL + S+T
Sbjct: 6 TSQIVDQYAEHIFYNSGAVGMALVVIDNNQVVNR-SFGETQPGNNIRPRPDSLIRIASIT 64
Query: 425 KGITAGMLHWLVDNGKLKLEENIANIWPEFKS----NGKDLIKVHHVLNHTSGLHNVSVD 480
K +T+ ++ L D+G +KL + + P+ + + K I++ H+ +HTSGL
Sbjct: 65 KLMTSEIMVKLADDGIVKLTDPLKKYAPKGVNVPSYSAKQPIRLLHLASHTSGLPREQPG 124
Query: 481 LSSENPLLI-CDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEIL 539
+ P+ D + L+ PG + Y L++ L + RA+GK + +L
Sbjct: 125 GPQKRPVFTWPTKDNRWQWLKLAKVTVPPGVKAAYSNLAYD-LLADALSRAAGKPYAHLL 183
Query: 540 EEGIIQPL 547
+ I PL
Sbjct: 184 RDKITAPL 191
|
| >1yqs_A D-alanyl-D-alanine carboxypeptidase; cell well biosynthesis, beta-lactam, beta-sultam, sulfonylation, hydrolase; HET: BSA; 1.05A {Streptomyces SP} SCOP: e.3.1.1 PDB: 1cef_A* 1ceg_A* 1ikg_A* 1iki_A* 1hvb_A* 1pw1_A* 1pw8_A* 1mpl_A* 1pwd_A* 1pwc_A* 1scw_A* 1pwg_A* 3pte_A 1sde_A* Length = 349 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 1e-26
Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 14/189 (7%)
Query: 367 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKG 426
L+ L + G G V D I S G+ R R + F V SVTK
Sbjct: 9 TGLQAVLHTALSQG-APGAMV-RVDDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKS 66
Query: 427 ITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSE-- 484
+A +L LVD GKL L+ ++ P + + I V V++H SGL++ + D+ ++
Sbjct: 67 FSAVVLLQLVDEGKLDLDASVNTYLPGLLPDDR--ITVRQVMSHRSGLYDYTNDMFAQTV 124
Query: 485 -----NPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGW-LCGGIIERASGKKFQEI 538
+ + + + PG Y Y + + + G +IE+ +G
Sbjct: 125 PGFESVRNKVFSYQDLITLSLKHGVTNAPGAA--YSYSNTNFVVAGMLIEKLTGHSVATE 182
Query: 539 LEEGIIQPL 547
+ I PL
Sbjct: 183 YQNRIFTPL 191
|
| >2qmi_A PBP related beta-lactamase; PAB87, octamer, LU-HPDO3A, archaea, hydrolase; HET: DO3; 2.20A {Pyrococcus abyssi} Length = 447 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 2e-26
Identities = 50/191 (26%), Positives = 93/191 (48%), Gaps = 12/191 (6%)
Query: 367 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKG 426
KL F+VE + K+ GI + KDG+V+ G P P++++ + S+TK
Sbjct: 4 GKLESFIVEKMAERKVPGISISIIKDGDVVYAKGFGYRNVEARLPSTPETIYGIGSITKS 63
Query: 427 ITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENP 486
TA + LV+ G L L++ + + + VHH+L H+SG+ ++ + +
Sbjct: 64 FTALAIMKLVEEGGLSLDDPVEKFVNIKLRPFGEPVTVHHLLTHSSGIPSLGYAEAFIDG 123
Query: 487 LLICDW-------DECLNRIALSAPET--EPGQEQLYHYLSFGW-LCGGIIERASGKKFQ 536
++ D +E + +PG+ + YL+ G+ L G IIE+ SG ++
Sbjct: 124 MVGGDNWLPVSTPEETIAFARDMEKWAVAKPGER--FFYLNTGYVLLGKIIEKVSGVSYE 181
Query: 537 EILEEGIIQPL 547
E +++ I++PL
Sbjct: 182 EYIKKKILEPL 192
|
| >1ei5_A D-aminopeptidase, DAP; penicillin binding protein, alpha/beta domain, beta barrel domain, hydrolase; 1.90A {Ochrobactrum anthropi} SCOP: b.61.3.1 b.61.3.1 e.3.1.1 Length = 520 | Back alignment and structure |
|---|
Score = 111 bits (278), Expect = 1e-25
Identities = 51/284 (17%), Positives = 93/284 (32%), Gaps = 44/284 (15%)
Query: 367 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKG 426
+ L F+ + + K G V KDGEV++ + G P+ D+ P+ SV+K
Sbjct: 7 SALEAFVRHIPQNYKGPGGVVAVVKDGEVVLQHAWGFADLRTRTPMTLDTRMPICSVSKQ 66
Query: 427 ITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENP 486
T +L V +L L++ + +F+ V + N+ SGL +
Sbjct: 67 FTCAVLLDAVGEPEL-LDDALEAYLDKFEDER---PAVRDLCNNQSGLRDYWALSVLCGA 122
Query: 487 LLICDW--DECLNRIALSAP-ETEPGQEQLYHYLSFGW-LCGGIIERASGKKFQEILEEG 542
+ + + + EPG Y Y + + + +IE +G+ +IL E
Sbjct: 123 DPEGVFLPAQAQSLLRRLKTTHFEPGSH--YSYCNGNFRILADLIEAHTGRTLVDILSER 180
Query: 543 IIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLA 602
I P G++ A L DT ++ +G
Sbjct: 181 IFAPA------------GMKR--AELISDTALFDECTGYEGDTVRGFL------------ 214
Query: 603 AITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPP 646
PA + + A S + + +
Sbjct: 215 ---PATNRI-----QWMGDAGICASLNDMIAWEQFIDATRDDES 250
|
| >3tg9_A Penicillin-binding protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.20A {Bacillus halodurans} Length = 356 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 1e-24
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 369 LRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGIT 428
+++ L + D K+ G + K ++ S G R + P + + F + S K T
Sbjct: 3 MKNHLHTIMEDWKLSGTAL-MKKGEDIPFIASLGFANRAERIPNEHHTRFGIASGCKLFT 61
Query: 429 AGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLL 488
A + LV+ GKL + +++ N + +HH+L HTSG+ + + +++
Sbjct: 62 AIAICQLVEAGKLSFDTPLSDWLDAPFPN----VTIHHLLTHTSGVPDYFDEEITDDFED 117
Query: 489 ICDW---------DECLNRIALSAPETEPGQEQLYHYLSFG-WLCGGIIERASGKKFQEI 538
+ + L + + PG +HY + G L G ++E SG FQE
Sbjct: 118 LWKDVPMYHLRRLKDFLPLFQHAPMKFPPGHR--FHYNNAGFILLGLVVESVSGVTFQEY 175
Query: 539 LEEGIIQPL 547
+E + Q
Sbjct: 176 VEANVFQRA 184
|
| >3hlc_A Transesterase, LOVD; alpha/beta hydrolase fold, transferase; HET: PG4; 2.00A {Aspergillus terreus} PDB: 3hld_A* 3hlf_A* 3hle_A* 3hlg_A* 3hlb_A 3hl9_A Length = 432 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 3e-23
Identities = 50/255 (19%), Positives = 89/255 (34%), Gaps = 32/255 (12%)
Query: 367 AKLRDFLVELGNDGKILGIQVCAY-KDGEVIIDTSAGMLG-----RYDPRPVQPDSLFPV 420
+ + +I G + A G + G P+Q D+ +
Sbjct: 34 VLMETAFRKAVESRQIPGAVIMARDASGNLNYTRCFGARTVRRDENNQLPPLQVDTPCRL 93
Query: 421 FSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFK---------SNGKDL-------IKV 464
S TK +T M+ ++ G + L+E + + P+ G I +
Sbjct: 94 ASATKLLTTIMVLQCMERGLVDLDETVDRLLPDLSAMPVLEGFDDAGNARLRERRGKITL 153
Query: 465 HHVLNHTSGL----HNVSVDLSSENPLLICDWDECLNRIALSAP-ETEPGQEQLYHYLSF 519
H+L HTSGL + + L + + P +PG E +Y +
Sbjct: 154 RHLLTHTSGLSYVFLHPLLREYMAQGYLQSAEKFGIQSRL-APPAVNDPGAEWIYG-TNL 211
Query: 520 GWLCGGIIERASGKKFQEILEEGIIQPLSI-DGELYIGIPPGVESRLASLTIDTDDLNKV 578
W G ++ERA+G ++ L+E I PL I D + P + +R A T ++
Sbjct: 212 DWA-GKLVERATGLDLEQYLQENICAPLGITDMTFKLQQRPDMLARRADQTHRNSADGRL 270
Query: 579 SGINNRPDLRLPSSF 593
++ R
Sbjct: 271 R-YDDSVYFRADGEE 284
|
| >2dcf_A 6-aminohexanoate-dimer hydrolase; HET: ACA MES; 1.40A {Flavobacterium SP} SCOP: e.3.1.1 PDB: 3a65_A* 1wyc_A 2zm7_A* 2e8i_A* 2zma_A* 3a66_A* 2zm0_A* 1wyb_A 2zm8_A* 2zly_A* 2zm9_A* 2zm2_A* Length = 392 | Back alignment and structure |
|---|
Score = 93.3 bits (232), Expect = 2e-20
Identities = 36/209 (17%), Positives = 67/209 (32%), Gaps = 25/209 (11%)
Query: 363 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFS 422
+ A+L D L + V + EV+ + Y PD + +
Sbjct: 64 GAIAAQLPD-LEQRLEQTYTDAFLV--LRGTEVVAE-------YYRA-GFAPDDRHLLMA 112
Query: 423 VTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGL-------- 474
V+K + ++ LVD G++ + + PE + D V VL+ +
Sbjct: 113 VSKSLCGTVVGALVDEGRIDPAQPVTEYVPELAGSVYDGPSVLQVLDMQISIDYNEDYVD 172
Query: 475 ---HNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFG-WLCGGIIERA 530
+ D S+ + E + Y S + I+ER
Sbjct: 173 PASEVQTHDRSAGWRTRRHGDPADTYEFLTTLRGDGSTGE--FQYCSANTDVLAWIVERV 230
Query: 531 SGKKFQEILEEGIIQPLSIDGELYIGIPP 559
+G ++ E L + L D + I +
Sbjct: 231 TGLRYVEALSTYLWAKLDADRDATITVDT 259
|
| >4gb7_A 6-aminohexanoate-dimer hydrolase; structural genomics, IDP05595, national institute of allergy and infectious diseases; HET: MSE; 1.60A {Bacillus anthracis} Length = 422 | Back alignment and structure |
|---|
Score = 91.1 bits (226), Expect = 2e-19
Identities = 30/218 (13%), Positives = 66/218 (30%), Gaps = 35/218 (16%)
Query: 364 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSV 423
L++ L + D ++ +G+++ + RY + S+
Sbjct: 96 GSATPLKELLDDNKTDAFVV------VHNGQLVYE-------RYFN-GYNESEPHGMASL 141
Query: 424 TKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGL---HNVSVD 480
K T ++ L + ++ LE+ E K+ + +++ + +
Sbjct: 142 AKVFTGAIIQSLAEENRIDLEKTADTYIKELKNTPFGKATLQQLMDMQVSVEYPTHGYEH 201
Query: 481 LSSENP-------------LLICDWDECLNRIALSAP-ETEPGQEQLYHYLSFG-WLCGG 525
+ EN D + + A PG + Y +
Sbjct: 202 PALENQDAQLYLASNILPRDKNYDGPMKIYDMLQEAKETAPPGSV--FSYNNGSTETLAW 259
Query: 526 IIERASGKKFQEILEEGIIQPLSIDGELYIGI-PPGVE 562
II +GK E + E I + ++ Y +E
Sbjct: 260 IIRTITGKSLAENVSERIWSQIGMEENAYYVTDETKIE 297
|
| >3i7j_A Beta-lactamase MB2281C; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 2.20A {Mycobacterium bovis} Length = 280 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 2e-17
Identities = 33/174 (18%), Positives = 52/174 (29%), Gaps = 46/174 (26%)
Query: 374 VELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLH 433
+E+ + V+ +F + SVTK + A
Sbjct: 4 LEVLGGWPVPAAAAAVIGPAGVL------------ATHGDTARVFALASVTKPLVARAAQ 51
Query: 434 WLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWD 493
V+ G + L+ G V H+L HTSGL
Sbjct: 52 VAVEEGVVNLDTPA----------GPPGSTVRHLLAHTSGL------------------- 82
Query: 494 ECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPL 547
+ PG ++Y F L ++R SG +F L E + +PL
Sbjct: 83 ----AMHSDQALARPGTRRMYSNYGFTVL-AESVQRESGIEFGRYLTEAVCEPL 131
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 78.7 bits (193), Expect = 5e-15
Identities = 76/573 (13%), Positives = 159/573 (27%), Gaps = 134/573 (23%)
Query: 62 AEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIP 121
E QY + I+ + D + + + + + + L
Sbjct: 12 GEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKD--AVSGTLRLF- 68
Query: 122 EVIQSSETVLILEFMDGIRLNDCESL-EAFGV-NKQKVVEEITRAYAHQIYVDGFFNGDP 179
+ S + ++ +F++ + + + L +Q +TR Y Q D +N D
Sbjct: 69 WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQP--SMMTRMYIEQ--RDRLYN-DN 123
Query: 180 HPGNFLVSKDPPHRPILLDFGLTKKLSS----------SM----KQALAKMFFAAAEGDH 225
+K R L + L + K +A +
Sbjct: 124 QV----FAKYNVSRLQPYL-KLRQALLELRPAKNVLIDGVLGSGKTWVA----LDVCLSY 174
Query: 226 VALLSAFA------EMGLRLRLDVPEQAME-VSTLFFRTSAPANEAFETVKNLS---EQR 275
+ + + PE +E + L ++ + N+
Sbjct: 175 -KVQCKMDFKIFWLNLK---NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230
Query: 276 AKNLKVIQEKMKLNQ-----KEVKRFNPVDAFPGD--IVIFSRVLNLLRGLSSTMNVRIV 328
L+ + + V+ +AF I++ +R + LS+ I
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHIS 290
Query: 329 YLDIMRPFAEY--------VLQVGINKEPSVSAEWIYSKPIH-SDVEAKLRDFLVELGND 379
L P E + + P S + +RD L N
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDCRPQDLPR---EVLTTNPRRLSIIAESIRDGLATWDN- 346
Query: 380 GKILGIQVCAYKDGEV-----IIDTSAGMLGRYDPRPVQPD-SLFPVFSVTKGITAGMLH 433
+K II++S +L + R + S+FP S I +L
Sbjct: 347 ----------WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPP-SAH--IPTILLS 393
Query: 434 WLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWD 493
+ + + N K + L++ T + ++ ++L + + +
Sbjct: 394 LIWFDVIKSDVMVVVN-----KLHKYSLVE-KQPKESTISIPSIYLELKVK-----LENE 442
Query: 494 ECLNRIAL---SAPETEPGQEQL-------------YH----------------YLSFGW 521
L+R + + P+T + + +H +L F +
Sbjct: 443 YALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRF 502
Query: 522 LCGGIIERASGKKFQEILEEGIIQPLSIDGELY 554
L I R + G I + Y
Sbjct: 503 LEQKI--RHDSTAWN---ASGSILNTLQQLKFY 530
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 71.8 bits (175), Expect = 6e-13
Identities = 77/535 (14%), Positives = 163/535 (30%), Gaps = 146/535 (27%)
Query: 1 MGGMFMDFVETPLATASIAQVHRATLVDGRQVV-VKVQHQGIKTIILEDLKNAKSIVDWI 59
+ G +T +A + ++ ++ + +++ +LE L+ +D
Sbjct: 158 VLG----SGKTWVA-LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPN 212
Query: 60 AWAEPQYDFNPIID-EWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDV 118
+ + N + + + L S+ +E+
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAELRRL-LKSK---------------PYENC---------- 246
Query: 119 LIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGD 178
L L+L ++ + ++ AF ++ + ++ TR
Sbjct: 247 L-----------LVL---LNVQ--NAKAWNAFNLSCKILL--TTR--------------F 274
Query: 179 PHPGNFLVSKDPPHRPI-LLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGL 237
+FL + H + LT +LL + +
Sbjct: 275 KQVTDFLSAATTTHISLDHHSMTLTPDEV-------------------KSLLLKYLDCRP 315
Query: 238 RLRLDVPEQAMEVSTLFFRT-SAPANEAFETVKNLSEQRAKNLKVIQEK--MKLNQKEVK 294
+ D+P + + + + + T N L I E L E +
Sbjct: 316 Q---DLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYR 372
Query: 295 R-FNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSA 353
+ F+ + FP I + +L+L+ +V ++ +Y L + K+P S
Sbjct: 373 KMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVM----VVVNKLHKYSL---VEKQPKEST 425
Query: 354 EWIYSKPIHSDVEAKLRDFLVELGNDGKILG--IQVCAYKDGEVIIDTSAG----MLGR- 406
I S I+ +++ KL + L I+ + ++I +G
Sbjct: 426 ISIPS--IYLELKVKLEN-EYALHR--SIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH 480
Query: 407 -YDPRPVQPDSLFP-VF-------------SVTKGITAGMLHWLVDNGKLKL-EENIANI 450
+ + +LF VF S + +L+ L LK + I +
Sbjct: 481 LKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQ---LKFYKPYICDN 537
Query: 451 WPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPE 505
P+++ ++ + EN LIC L RIAL A +
Sbjct: 538 DPKYERLVNAIL--DFLPKI------------EEN--LICSKYTDLLRIALMAED 576
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 864 | |||
| 3zyt_A | 372 | Esterase A, ESTA; hydrolase, enzymatic promiscuity | 100.0 | |
| 4gdn_A | 342 | Protein FLP; peptidase, alpha/beta, hydrolase; HET | 100.0 | |
| 2drw_A | 363 | DAA, D-amino acid amidase; penicillin recognizing | 100.0 | |
| 3rju_A | 351 | Beta-lactamase/D-alanine carboxypeptidase; structu | 100.0 | |
| 1yqs_A | 349 | D-alanyl-D-alanine carboxypeptidase; cell well bio | 100.0 | |
| 1ci9_A | 392 | ESTB, protein (carboxylesterase); hydrolase, cabox | 100.0 | |
| 2qz6_A | 358 | Beta-lactamase; psychrophIle, cold adaptation, ant | 100.0 | |
| 1zkj_A | 359 | CMY-10, extended-spectrum beta-lactamase; plasmid, | 100.0 | |
| 2wzx_A | 371 | Beta-lactamase; inhibitor, hydrolase, antibiotic r | 100.0 | |
| 2ffy_A | 358 | Beta-lactamase; AMPC, deacylation, transition stat | 100.0 | |
| 2qmi_A | 447 | PBP related beta-lactamase; PAB87, octamer, LU-HPD | 100.0 | |
| 3hlc_A | 432 | Transesterase, LOVD; alpha/beta hydrolase fold, tr | 100.0 | |
| 3tg9_A | 356 | Penicillin-binding protein; structural genomics, P | 100.0 | |
| 3o3v_A | 335 | Beta-lactamase, CLBP protein; alpha/beta, disulfid | 100.0 | |
| 1ei5_A | 520 | D-aminopeptidase, DAP; penicillin binding protein, | 100.0 | |
| 2dcf_A | 392 | 6-aminohexanoate-dimer hydrolase; HET: ACA MES; 1. | 100.0 | |
| 4gb7_A | 422 | 6-aminohexanoate-dimer hydrolase; structural genom | 100.0 | |
| 3i7j_A | 280 | Beta-lactamase MB2281C; alpha-beta protein., struc | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 99.78 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 99.76 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 99.75 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 99.74 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 99.73 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 99.73 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.71 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.71 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 99.71 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.71 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 99.7 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 99.69 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.69 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 99.69 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 99.68 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 99.68 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.67 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.65 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 99.63 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 99.63 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 99.62 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 99.62 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 99.61 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.59 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 99.58 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 99.57 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 99.55 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.55 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.54 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 99.54 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.53 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 99.53 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 99.53 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 99.53 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 99.53 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 99.52 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 99.52 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 99.52 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.52 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.52 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 99.52 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 99.52 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 99.52 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 99.51 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 99.51 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 99.51 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.51 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.51 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 99.51 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.51 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.51 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 99.51 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 99.51 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 99.51 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 99.5 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 99.5 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 99.5 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 99.5 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 99.5 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 99.5 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 99.5 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 99.49 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.49 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 99.49 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.48 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 99.48 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.48 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 99.48 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 99.48 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.48 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.47 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.47 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 99.47 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 99.47 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 99.47 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.47 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.47 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.47 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.46 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.46 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 99.46 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 99.46 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 99.46 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 99.46 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.46 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 99.46 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 99.46 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.46 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 99.45 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.45 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.45 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.45 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 99.45 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.45 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.45 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 99.45 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.45 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.45 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 99.45 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 99.45 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.45 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 99.45 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.45 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 99.45 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.44 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 99.44 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.44 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 99.44 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.44 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.44 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.44 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 99.44 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 99.44 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 99.44 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 99.44 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.44 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.44 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 99.44 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.44 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.44 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 99.44 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 99.44 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 99.44 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 99.43 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.43 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.43 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.43 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 99.43 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.43 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.43 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.43 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 99.43 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 99.43 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.43 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 99.43 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 99.43 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.43 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 99.43 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 99.43 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 99.43 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 99.43 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 99.43 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 99.43 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 99.43 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.42 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 99.42 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.42 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.42 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 99.42 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.42 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.42 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 99.42 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.42 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 99.42 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.42 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 99.42 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 99.42 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.42 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.42 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 99.42 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.42 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 99.42 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.41 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 99.41 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 99.41 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 99.41 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.41 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.41 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.41 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 99.41 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.41 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 99.41 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 99.41 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 99.41 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 99.41 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.41 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 99.41 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 99.4 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.4 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.4 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.4 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 99.4 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.4 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.4 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 99.4 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 99.4 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.4 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 99.39 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.39 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 99.39 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 99.39 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.39 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 99.39 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.39 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.39 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.39 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 99.39 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.39 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.39 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.38 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 99.38 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.38 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 99.38 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.38 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 99.38 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.38 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.37 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.37 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 99.37 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 99.37 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 99.37 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 99.37 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 99.36 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 99.36 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.36 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.36 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.36 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.36 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.36 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.36 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.35 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 99.35 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.35 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.35 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.35 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.35 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.35 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.35 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 99.34 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 99.34 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 99.34 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.34 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.34 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.34 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.34 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.33 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.33 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 99.33 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.33 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.32 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.32 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 99.3 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.3 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.3 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 99.3 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 99.28 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.28 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.28 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.26 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.26 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 99.24 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.24 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.23 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.19 | |
| 2cc1_A | 262 | Beta-lactamase, penicillinase; hydrolase, antibiot | 99.18 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.17 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.16 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.02 | |
| 1bsg_A | 266 | Beta lactamase, penicillinase; hydrolase, antibiot | 98.92 | |
| 2j9o_A | 298 | TLL2115 protein; penicillin-binding protein, hydro | 98.87 | |
| 1hzo_A | 271 | Beta-lactamase; mixed alpha/beta, cephalosporinase | 98.87 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.81 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.78 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.75 | |
| 2qpn_A | 287 | Beta-lactamase GES-1; APO-enzyme, plasmid, hydrola | 98.75 | |
| 2p74_A | 263 | Beta-lactamase CTX-M-9A; ultra-high resolution, ac | 98.72 | |
| 1o7e_A | 276 | L2 beta lactamase; hydrolase, class A; 1.51A {Sten | 98.71 | |
| 1e25_A | 282 | Extended-spectrum beta-lactamase PER-1; hydrolase, | 98.7 | |
| 1g6a_A | 271 | Beta-lactamase PSE-4; class A beta-lactamase, carb | 98.69 | |
| 1m40_A | 263 | TEM-1, beta-lactamase TEM; acylation mechanism, ul | 98.67 | |
| 1bue_A | 265 | Protein (imipenem-hydrolysing beta-lactamase); hyd | 98.67 | |
| 3c5a_A | 264 | Class A carbapenemase KPC-2; beta-lactamase, C-ter | 98.62 | |
| 1n9b_A | 265 | Penicillinase, beta-lactamase SHV-2; beta-lactam h | 98.61 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.6 | |
| 2wk0_A | 265 | Beta-lactamase; hydrolase, iodopenicillanate, anti | 98.53 | |
| 1tvf_A | 369 | PBP4, penicillin binding protein 4; structural gen | 98.46 | |
| 3a3j_A | 344 | PBP5; penicillin binding protein 5, DACA, hydrolas | 98.45 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.42 | |
| 1w7f_A | 307 | Beta-lactamase; hydrolase, isocitrate, bacillus li | 98.41 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 98.41 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.39 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.35 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.33 | |
| 3dw0_A | 294 | Class A carbapenemase KPC-2; beta-lactamase, antib | 98.33 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 98.29 | |
| 4euz_A | 283 | Carbapenem-hydrolizing beta-lactamase SFC-1; carba | 98.28 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.22 | |
| 4ewf_A | 275 | Beta-lactamase; ABA-sandwich, structural genomics, | 98.21 | |
| 3p09_A | 290 | Beta-lactamase; structural genomics, center for st | 98.19 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 98.17 | |
| 1ghp_A | 258 | Beta-lactamase, penicillinase; hydrolase, antibiot | 98.15 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 98.08 | |
| 1es5_A | 262 | DD-transpeptidase; penicillin-binding, serine pept | 98.04 | |
| 4hes_A | 275 | Beta-lactamase class A-like protein; structural ge | 98.03 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 97.93 | |
| 1xp4_A | 379 | D-alanyl-D-alanine carboxypeptidase; five-stranded | 97.92 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 97.9 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 97.86 | |
| 2wuq_A | 318 | BLAB, beta-lactamase regulatory protein BLAB; clas | 97.85 | |
| 3mzf_A | 363 | D-alanyl-D-alanine carboxypeptidase DACA; beta-lac | 97.81 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.79 | |
| 3ita_A | 352 | D-alanyl-D-alanine carboxypeptidase DACC; ppenicil | 97.77 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.77 | |
| 1alq_A | 266 | CP254 beta-lactamase; hydrolase, circular permuted | 97.72 | |
| 3qhy_A | 271 | Beta-lactamase; enyzme-inhibitor complex, beta-pro | 97.6 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 97.59 | |
| 3hun_A | 453 | Penicillin-binding protein 4; ampicillin, beta-lac | 97.52 | |
| 3lez_A | 260 | Beta-lactamase; antibiotic resistance, halotoleran | 97.52 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 97.5 | |
| 3ny4_A | 265 | Beta-lactamase, penicillinase; penicillin binding | 97.49 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 97.37 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 97.36 | |
| 4dxb_A | 637 | RG13, maltose-binding periplasmic protein, beta-la | 97.24 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 97.01 | |
| 3mfd_A | 334 | D-alanyl-D-alanine carboxypeptidase DACB; penicill | 96.95 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 96.4 | |
| 2bcf_A | 276 | Probable D-alanyl-D-alanine carboxypeptidase DACB2 | 95.79 | |
| 3g15_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 95.19 | |
| 3cjm_A | 282 | Putative beta-lactamase; NP_815223.1, structural g | 94.78 | |
| 2xep_A | 458 | ORF12; hydrolase; 1.50A {Streptomyces clavuligerus | 93.27 | |
| 2x02_A | 248 | Beta-lactamase OXA-10; class D, hydrolase, antibio | 92.83 | |
| 1cja_A | 342 | Protein (actin-fragmin kinase); transferase; HET: | 92.75 |
| >3zyt_A Esterase A, ESTA; hydrolase, enzymatic promiscuity, beta-lactamase; 2.45A {Arthrobacter nitroguajacolicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=439.10 Aligned_cols=350 Identities=27% Similarity=0.373 Sum_probs=255.5
Q ss_pred HHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCc
Q 002927 367 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEEN 446 (864)
Q Consensus 367 ~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~ 446 (864)
+.+++.+++.++++.++|++++|+++|+.+.+.+.| .|+++||+|+|+|+||+||++++++|+|+|+|+||+|
T Consensus 11 e~v~~~~~~~~~~~~~~GaavaV~~~G~~v~d~~~g-------~p~~~dt~f~i~S~tK~~ta~~~~~lv~~G~l~ld~~ 83 (372)
T 3zyt_A 11 EPVAELFGVFLEQDPDYSAQVAAYHRGVKVLDLSGG-------PHIRPDSVTGVFSCSKGMAGLVMALLVQDGELDLEAE 83 (372)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEEEETTEEEEEEEES-------TTCCTTCBEECTTHHHHHHHHHHHHHHHTTSCCTTSB
T ss_pred HHHHHHHHHHHHcCCCceEEEEEEECCEEEEECCCC-------CCCCCCCEEEeeehHHHHHHHHHHHHHHCCCCCCCCc
Confidence 345666666667788999999999999888766554 7899999999999999999999999999999999999
Q ss_pred hhhhcccCccCCCCccCHHhHhcCCCCCCCCCCCccCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHHHHHH
Q 002927 447 IANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGI 526 (864)
Q Consensus 447 v~~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~lLg~i 526 (864)
|++|||+|...++++|||||||+||||++.+..... .....+.+++++.+.+.++.++||+.|.|||.+|.+|+|.|
T Consensus 84 v~~~lP~~~~~~~~~iTi~~LL~htsGl~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~pg~~~~Ysn~~~~~l~g~i 160 (372)
T 3zyt_A 84 VVKYWPEFGVEGKSSITVAQLLSHRAGLLGVEGGLT---LHEVNNSELAAAKLAELPPLWKPGTAFGYHALTIGIFMEEL 160 (372)
T ss_dssp GGGTCGGGGTTTTSSCBHHHHTTTCSCCCCCTTCCC---HHHHHTTHHHHHHHHTSCCSSCSSSCBCCCTTHHHHHHHHH
T ss_pred hHHhCcccccCCCCCccHHHHhhcCCCCCCcccccc---ccccCCHHHHHHHHHhCCCcCCCCCceeecCCcHHHHHHHH
Confidence 999999999888899999999999999997644321 11234567889999999999999999999999996356999
Q ss_pred HHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhhhhhcccc
Q 002927 527 IERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITP 606 (864)
Q Consensus 527 ie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 606 (864)
||++||++|.+|++++||+||||++|++ .++....+++..+.......... .+................
T Consensus 161 ie~~tg~~~~~~~~~~i~~PLgm~~t~~--~p~~~~~r~a~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 229 (372)
T 3zyt_A 161 CRRITGSTLQEVFEQRIRAVTGANFYLG--LPESEESRFAQFRWAADPSWPWV---------DPASHFGLAANAAVGDIL 229 (372)
T ss_dssp HHHHHSSCHHHHHHHHTHHHHTCSEESS--CCGGGGGGBCCCBCCCCTTCCCC---------CTTSHHHHHTTTTTCCGG
T ss_pred HHHHHCCCHHHHHHHhhhcccCCccccc--CChhhhhcceeeecccCCCcccc---------cccccccccccccccccc
Confidence 9999999999999999999999987654 56666777777664433221110 000000000001111222
Q ss_pred cccccccccccccCCcceecCHHHHHHHHHHHHcC--CCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccchhHHHHHH
Q 002927 607 AVFNMLNIRRAIIPAANGHCSARALARYYAALADG--GVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTKKELLAA 684 (864)
Q Consensus 607 ~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~g--g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (864)
...+...+.....|+||+++|++||+||+++|++| |...+.+ +. +.++++.
T Consensus 230 ~~~~~~~~~~~~~~aggl~sTa~Dlar~~~~ll~g~~G~~~~~~----------------~l-----------~~~~~~~ 282 (372)
T 3zyt_A 230 DLPNIREVRAAGLSSAAGVASAEGMARIYAAALTGLEGKSAMPP----------------LL-----------TEETIRT 282 (372)
T ss_dssp GGGGSHHHHHHCCTTTCCEECHHHHHHHHHHHHTCBCGGGCBCC----------------SS-----------CHHHHHH
T ss_pred ccccchhhhcccccccccccCHHHHHHHHHHHHhCCCCCcCCcc----------------cC-----------cHHHHHH
Confidence 33445556667789999999999999999999987 3333331 11 1223333
Q ss_pred HhhcCCCCCCCccccccCCCCccccccCccchhhhhccccCCCCCCCccCCCCCCCCCCcccccccCCcccccccccCCC
Q 002927 685 LKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGD 764 (864)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 764 (864)
| .+++. ... +..+
T Consensus 283 ~----------------------------------~~~~~-------------------~~~----------d~~~---- 295 (372)
T 3zyt_A 283 V----------------------------------SAEQV-------------------FGI----------DRVF---- 295 (372)
T ss_dssp H----------------------------------HSCCE-------------------EEE----------BTTT----
T ss_pred H----------------------------------hccCC-------------------CCC----------Cccc----
Confidence 3 11110 000 0000
Q ss_pred CCCCCCCCCccccCccccCC--CCCCccccccCCCCCcccccccCCCeEEEEEecccCCCcc---hHHHHHHHHHHh
Q 002927 765 YGDLALPNGRFGLGFKRYNT--RDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGAT---TGRIIHFVCSEL 836 (864)
Q Consensus 765 ~~~~~~~~~~~glG~~~~~~--~~~~~~~~gh~G~~G~~~~~~P~~~~~vv~~~N~~~~~~~---~~~~~~~~~~~l 836 (864)
.....||+||+.... +.++...|||+|++|+++|+||+++++|++++|++.++.. ..++.+.|.+++
T Consensus 296 -----~~~~~~GlG~~~~~~~~~~~~~~~~GH~G~~Gt~~~idP~~~l~v~~ltN~~~p~~~~~r~~~L~~av~~~l 367 (372)
T 3zyt_A 296 -----GETGCFGTVFMKSHTRMPFGSYRAFGHDGASASLGFADPVYELGFGYVPQTAEPGGVGCRNFQLSSAVREVI 367 (372)
T ss_dssp -----SSEEEESSSSEECBTTBCSSCTTCEEEECTTSCEEEEEGGGTEEEEEEESBCCCCSTTSHHHHHHHHHHHHH
T ss_pred -----CCCCceeeeeccCCCCCCCCCCCeEEECChhhEEEEEEeCCCEEEEEEeCCCCCCCccHHHHHHHHHHHHHH
Confidence 022579999987552 2345678999999999999999999999999999866544 455677777776
|
| >4gdn_A Protein FLP; peptidase, alpha/beta, hydrolase; HET: PE4; 3.20A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-50 Score=444.03 Aligned_cols=244 Identities=17% Similarity=0.220 Sum_probs=200.8
Q ss_pred HHHHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCcc
Q 002927 365 VEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLE 444 (864)
Q Consensus 365 l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld 444 (864)
..+++++++++.++++.+||++|+|+++|+++++++||+++.+.+.|++++|+|+|||+||+|||+++++|+|+|+|+||
T Consensus 11 ~~~~id~~i~~~~~~~~~pG~sv~V~~~g~~v~~~~~G~ad~~~~~~~~~~T~f~iaSvtK~~Ta~~i~~Lve~G~l~Ld 90 (342)
T 4gdn_A 11 SQQQIDKIIEHDLQKGHIPGASILIVKNGKVFLNKGYGYQDVDKKVKASPTTKYEIASNTKAFTGLAILKLAQEGRLNLN 90 (342)
T ss_dssp SSCSHHHHHHHHHHHHTCSEEEEEEEETTEEEEEEEEEEEETTTTEECCTTCEEECGGGGHHHHHHHHHHHHHHTSSCTT
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEEECCEEEEEEEEEEeccCCCCCCCCCCEEeeeeHHHHHHHHHHHHHHHcCCcchh
Confidence 34567888888888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhcccCccC---CCCccCHHhHhcCCCCCCCCCCCccCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHH
Q 002927 445 ENIANIWPEFKSN---GKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGW 521 (864)
Q Consensus 445 ~~v~~ylP~~~~~---~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~ 521 (864)
+||++|||+|... ..++|||||||+|||||+.+...... ........+++++.+...++.++||+.|.|||.||.
T Consensus 91 d~v~~ylP~~~~~~~~~~~~ITir~LL~HtSGl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~y~- 168 (342)
T 4gdn_A 91 DDVSKHVPHFKMNYNGQNETITIKQLLAQTSGIPSDITSEDA-VTNKNNRLNDVTRAIMGDELHHKPGEEFEYSNMNYD- 168 (342)
T ss_dssp SBGGGTSTTCCCEETTEECCCBHHHHHHTCSCCCCSCTTCSS-CCSSCCCSSCCHHHHHTSCCSSSTTSSCCCCHHHHH-
T ss_pred heeeecCCccccccccCCCceEEeecccccCCCCCccccccc-cccccccHHHHHHHHhhCCCcCCCCceeeecCcccc-
Confidence 9999999999642 35789999999999999976433221 111223456788888999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhhhh
Q 002927 522 LCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQL 601 (864)
Q Consensus 522 lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 601 (864)
|||.|||++||++|++|++++||+||||++|.|. .++....+.+.+|........
T Consensus 169 lLg~iie~vtg~~~~~~~~~~i~~PLgm~~t~~~-~~~~~~~~~a~gy~~~~~~~~------------------------ 223 (342)
T 4gdn_A 169 LLGLIIQNVTKQSYTKYITNSWLKPLHMTHTSFK-QTNNKSKHDAIGYELQGSTPV------------------------ 223 (342)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHTTTTTTCTTCEEC-CSCCCCSSBCCCEEEETTEEE------------------------
T ss_pred hHHHHHHHHHCcCHHHHHHHHHhcccCCCCcccC-CCcccccccceeeeecCCccc------------------------
Confidence 9999999999999999999999999999999764 344445556665543222111
Q ss_pred hcccccccccccccccccCCcceecCHHHHHHHHHHHHcCC
Q 002927 602 AAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGG 642 (864)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg 642 (864)
...+.+.....|+||++||++||+||++++++++
T Consensus 224 -------~~~~~~~~~~~~aggl~st~~Dl~~~~~~~l~~~ 257 (342)
T 4gdn_A 224 -------VSKPEFNLWDTPSAYMMTSTEDLEHWIKFQLNPP 257 (342)
T ss_dssp -------ECCCCCCGGGHHHHCEEEEHHHHHHHHHHHHSCC
T ss_pred -------cccccccccchhccccccCHHHHHHHHHHHcCCC
Confidence 1111222234588999999999999999999875
|
| >2drw_A DAA, D-amino acid amidase; penicillin recognizing protein, D-stereospecific, hydrophobic, hydrolase; 2.10A {Ochrobactrum anthropi} SCOP: e.3.1.1 PDB: 2dns_A 2efu_A* 2efx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-48 Score=434.66 Aligned_cols=264 Identities=20% Similarity=0.254 Sum_probs=200.0
Q ss_pred HHHHHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCc
Q 002927 364 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKL 443 (864)
Q Consensus 364 ~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~l 443 (864)
++.+.+++.+++.+++ .+||++++|+++|+.++.+++|+++...+.|++++|+|+|+|+||+|||+++++|+|+|+|+|
T Consensus 3 ~l~~~l~~~l~~~~~~-~~pG~~v~V~~~g~~v~~~~~G~ad~~~~~p~~~dt~f~iaS~TK~~Ta~~i~~Lve~G~L~L 81 (363)
T 2drw_A 3 DLNNAIQGILDDHVAR-GVVGVSLALCLPGEETSLYQSGYADKFNKMPMTGDHLFRIASCTKSFIATGLHLLVQDGTVDL 81 (363)
T ss_dssp HHHHHHHHHHHHHHTT-TCCEEEEEEECTTSCEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHTTSCCT
T ss_pred hHHHHHHHHHHHHHHc-CCCeEEEEEEECCcEEEEEeEEeccccCCCCCCCCCeeechhhhHHHHHHHHHHHHHCCCCCC
Confidence 4567788888888886 699999999989999999999999999999999999999999999999999999999999999
Q ss_pred cCchhhhcccCccCCCCccCHHhHhcCCCCCCCCCCCccCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHHH
Q 002927 444 EENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLC 523 (864)
Q Consensus 444 d~~v~~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~lL 523 (864)
|+||.+|||+| .++++|||||||+|||||+.+. ......+....+.+++++.+...++.++||+.|.|||.||. ||
T Consensus 82 dd~v~~ylP~~--~~~~~ITir~LLtHtSGl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~y~-lL 157 (363)
T 2drw_A 82 DEPITRWFPDL--PKAAQMPVRILLNHRSGLPDFE-TSMPMISDKSWTAQEIVDFSFRHGVQKEPWHGMEYSNTGYV-LA 157 (363)
T ss_dssp TSBGGGTCTTS--TTGGGCBGGGGTTTCSCCCCCT-TTSBSSCCCCCCHHHHHHHHHHHSCCCCTTSSCCCCSHHHH-HH
T ss_pred CCcHHHhCcCC--CCCCCCcHHHHhhcccCCCCCc-cccccccccCCCHHHHHHHHHhCCCCCCCCCceEEchhhHH-HH
Confidence 99999999999 4568999999999999999862 22111233456889999999999999999999999999998 99
Q ss_pred HHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCC-CCCCCCcchhhhhh
Q 002927 524 GGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLR-LPSSFQPDKISQLA 602 (864)
Q Consensus 524 g~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~ 602 (864)
|.|||++||++|.+|++++||+||||++|.|... ...+.+..|....... .+ ...+.+. .+.+....
T Consensus 158 g~iie~vtG~~~~~~~~~~I~~PLGm~~t~~~~~---~~~~~~~~y~~~~~~~-~~--~~~~~~~~~~~g~~~~------ 225 (363)
T 2drw_A 158 GMIIAHETGKPYSDHLRSRIFAPLGMKDTWVGTH---ETFPIEREARGYMHAA-AD--DENPQWDVSGAGDPVD------ 225 (363)
T ss_dssp HHHHHHHHTSCHHHHHHHHTHHHHTCCSCEETTT---CCCCGGGBCCCEEECB-TT--CCSCSSBCTTCCCCBT------
T ss_pred HHHHHHHHCCCHHHHHHHhhhhhcCCCcccCCcc---cCcchhcccccccccc-cc--ccccccccCCCCcccc------
Confidence 9999999999999999999999999999876421 2222333332100000 00 0000000 00000000
Q ss_pred ccccccccccccc-ccccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 603 AITPAVFNMLNIR-RAIIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 603 ~~~~~~~~~~~~~-~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
+ ...+...+. ....|+||++||++||+||++++++|.+++++
T Consensus 226 ~---~~~~~~~~~~~~~~~aggl~sT~~Dl~~~~~~ll~g~lls~~ 268 (363)
T 2drw_A 226 G---VWDSTEWFPLSGANAAGDMVSTPRDIVKFLNALFDGRILDQK 268 (363)
T ss_dssp T---EEECTTTSCHHHHGGGTCEEECHHHHHHHHHHHHTTSSSCHH
T ss_pred c---ccccccccCCCCCCCccceEeCHHHHHHHHHHHhcCCCCCHH
Confidence 0 000001111 12458999999999999999999988776554
|
| >3rju_A Beta-lactamase/D-alanine carboxypeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE CIT; 1.50A {Yersinia pestis} PDB: 3ozh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-47 Score=427.37 Aligned_cols=244 Identities=19% Similarity=0.246 Sum_probs=202.8
Q ss_pred hHHHHHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCC
Q 002927 363 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 442 (864)
Q Consensus 363 ~~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ 442 (864)
..+.+.+++++++.+++..+||++++|+++|++++ ++||+++.+.+.|++++|+|+|+|+||+|||+++++|+|+|+|+
T Consensus 4 ~~~~~~ld~~i~~~~~~~~~~G~~~~v~~~g~~~~-~~~G~~~~~~~~~~~~~t~f~i~S~tK~~ta~~i~~lv~~G~l~ 82 (351)
T 3rju_A 4 LLTSQIVDQYAEHIFYNSGAVGMALVVIDNNQVVN-RSFGETQPGNNIRPRPDSLIRIASITKLMTSEIMVKLADDGIVK 82 (351)
T ss_dssp TTHHHHHHHHHHHHHHHTTCSEEEEEEEETTEEEE-EEEECSSTTCCCCCCTTCBEECGGGHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEEECCEEEE-EEEEeccCCCCCCCCCCCEEEehhhHHHHHHHHHHHHHHcCCCC
Confidence 34678899999999999999999999999999998 69999999999999999999999999999999999999999999
Q ss_pred ccCchhhhcccCccC----CCCccCHHhHhcCCCCCCCCCCCccCCCCcC-CCCHHHHHHHHHccCCCCCCCCceecccC
Q 002927 443 LEENIANIWPEFKSN----GKDLIKVHHVLNHTSGLHNVSVDLSSENPLL-ICDWDECLNRIALSAPETEPGQEQLYHYL 517 (864)
Q Consensus 443 ld~~v~~ylP~~~~~----~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~ 517 (864)
||+||.+|||++... ++++|||||||+||||++.+........+.. ..+.+++++.+...++.++||+.|.|||.
T Consensus 83 ld~~v~~ylP~~~~~~~~~~~~~iTir~LL~htSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~Ysn~ 162 (351)
T 3rju_A 83 LTDPLKKYAPKGVNVPSYSAKQPIRLLHLASHTSGLPREQPGGPQKRPVFTWPTKDNRWQWLKLAKVTVPPGVKAAYSNL 162 (351)
T ss_dssp TTCBGGGGCCTTCCCCCSSTTCCCBHHHHHHTCSCCCSSCSSCCSSCCTTCSSCHHHHHHHHTTCCCCSCTTSEEECCSH
T ss_pred CCCcHHHhCcccccCCCCCCCCCCcHHHHHhCcCCCCCCCCCccccCcccccCCHHHHHHHHHhCCCCCCCCCceeecHH
Confidence 999999999997542 3489999999999999998654332222211 22678899999999999999999999999
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcch
Q 002927 518 SFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDK 597 (864)
Q Consensus 518 ~~~~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 597 (864)
+|. +||.|||++||++|++|++++||+||||++|.|. .++....+++..+. ..|.
T Consensus 163 ~~~-llg~iie~vtg~~~~~~~~~~i~~PLgm~~t~~~-~~~~~~~~~~~g~~------------~~~~----------- 217 (351)
T 3rju_A 163 AYD-LLADALSRAAGKPYAHLLRDKITAPLGMKNTTLT-PTAEQCKRLMIGVG------------SSRC----------- 217 (351)
T ss_dssp HHH-HHHHHHHHHHTSCHHHHHHHHTHHHHTCTTCBSS-CCHHHHTTBCCCTT------------CCCC-----------
T ss_pred HHH-HHHHHHHHHHCCCHHHHHHHhcccccCCCCCccC-CChhhhhhcccCcC------------CCCC-----------
Confidence 999 9999999999999999999999999999999764 22222333333220 0010
Q ss_pred hhhhhcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 598 ISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
.......|+||++||++||+||+++++++|.+.++
T Consensus 218 ---------------~~~~~~~g~ggl~st~~Dl~~~~~~~l~~g~~~~~ 252 (351)
T 3rju_A 218 ---------------GNTVAAAGSGGIYSTPEDMQHWMQQFLASDNSAPK 252 (351)
T ss_dssp ---------------CCCGGGTTTTCCEECHHHHHHHHHTTSCCSSCCCC
T ss_pred ---------------ccccccCCcceeEECHHHHHHHHHHHhCCCCCcch
Confidence 01123458999999999999999999999988776
|
| >1yqs_A D-alanyl-D-alanine carboxypeptidase; cell well biosynthesis, beta-lactam, beta-sultam, sulfonylation, hydrolase; HET: BSA; 1.05A {Streptomyces SP} SCOP: e.3.1.1 PDB: 1cef_A* 1ceg_A* 1ikg_A* 1iki_A* 1hvb_A* 1pw1_A* 1pw8_A* 1mpl_A* 1pwd_A* 1pwc_A* 1scw_A* 1pwg_A* 3pte_A 1sde_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-47 Score=423.88 Aligned_cols=323 Identities=21% Similarity=0.302 Sum_probs=241.8
Q ss_pred HHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCc
Q 002927 367 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEEN 446 (864)
Q Consensus 367 ~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~ 446 (864)
+.+++.+++++++ .+||++++| ++|+.++++++|+++...+.|++++|+|+|+|+||+|||+++++|+|+|+|+||+|
T Consensus 9 ~~l~~~l~~~~~~-~~pG~~v~v-~~g~~v~~~~~G~a~~~~~~p~~~dt~f~iaSvTK~~Ta~~i~~Lve~G~l~ldd~ 86 (349)
T 1yqs_A 9 TGLQAVLHTALSQ-GAPGAMVRV-DDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGKLDLDAS 86 (349)
T ss_dssp HHHHHHHHHHHHT-TCSEEEEEE-EETTEEEEEEEEBSCTTTCCBCCTTCBEECGGGHHHHHHHHHHHHHHTTSCCTTSB
T ss_pred HHHHHHHHHHHhC-CCCeEEEEE-EcCCEEEEEeEEEeecccCCCCCCCCeEecccchHHHHHHHHHHHHHCCCCCCCCc
Confidence 3456666666665 499999888 78899999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCccCCCCccCHHhHhcCCCCCCCCCCCccCC-------CCcCCCCHHHHHHHHHccCCCCCCCCceecccCcH
Q 002927 447 IANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSE-------NPLLICDWDECLNRIALSAPETEPGQEQLYHYLSF 519 (864)
Q Consensus 447 v~~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~~ 519 (864)
|.+|||+|.. .++|||||||+|||||+++....... .+....+.+++++.+...++.++||+.|.|||.+|
T Consensus 87 v~~ylP~~~~--~~~ITir~LL~HtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~y 164 (349)
T 1yqs_A 87 VNTYLPGLLP--DDRITVRQVMSHRSGLYDYTNDMFAQTVPGFESVRNKVFSYQDLITLSLKHGVTNAPGAAYSYSNTNF 164 (349)
T ss_dssp HHHHSTTCSS--CTTCBHHHHHTTCSCCCCTHHHHTSSHHHHHHHHTTCCCCHHHHHHHHHTSCCSSSTTSCCCCCHHHH
T ss_pred HHHhccCcCC--CCCccHHHHhhCcCCCCcccchhhhhccchhhcCccccCCHHHHHHHHhcCCCccCCCCCeEEccHhH
Confidence 9999999976 57899999999999999762111100 11234678999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCC-cccccccCCCCCCCCCCCCCCcchh
Q 002927 520 GWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTD-DLNKVSGINNRPDLRLPSSFQPDKI 598 (864)
Q Consensus 520 ~~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~ 598 (864)
. |||.|||++||++|++|++++||+||||++|.|....+....+.+..|.... .....
T Consensus 165 ~-lLg~iie~vtG~~~~~~~~~~i~~PLGm~~t~~~~~~~~~~~~~~~gy~~~~~~g~~~-------------------- 223 (349)
T 1yqs_A 165 V-VAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLTPDEAGGAL-------------------- 223 (349)
T ss_dssp H-HHHHHHHHHHSSCHHHHHHHHTTTTTTCTTCBCCTTCCCCCSSBCCCEECCSSTTCCC--------------------
T ss_pred H-HHHHHHHHHhCCCHHHHHHHhcccccCCCCcccCCcccccccccccceeccCCCCCcc--------------------
Confidence 8 9999999999999999999999999999998764322222233343332110 00000
Q ss_pred hhhhccccccccccccc-ccccCCcceecCHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccch
Q 002927 599 SQLAAITPAVFNMLNIR-RAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGT 677 (864)
Q Consensus 599 ~~~~~~~~~~~~~~~~~-~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (864)
.+...+. ....++||++||++||+||++++++|.+++++
T Consensus 224 ----------~~~~~~~~~~~~~aggl~sT~~Dl~~~~~~ll~g~lls~~------------------------------ 263 (349)
T 1yqs_A 224 ----------VDSTEQTVSWAQSAGAVISSTQDLDTFFSALMSGQLMSAA------------------------------ 263 (349)
T ss_dssp ----------EECCCCCCTTTGGGTCCEECHHHHHHHHHHHHTTCSSCHH------------------------------
T ss_pred ----------ccccccCcccccCCcCcEeCHHHHHHHHHHHhcCCCCCHH------------------------------
Confidence 0000011 11247899999999999999999998776554
Q ss_pred hHHHHHHHhhcCCCCCCCccccccCCCCccccccCccchhhhhccccCCCCCCCccCCCCCCCCCCcccccccCCccccc
Q 002927 678 KKELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHD 757 (864)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (864)
.+++|. ++. +. +
T Consensus 264 ---~~~~m~----------------------------------~~~-------------------~~-------~----- 275 (349)
T 1yqs_A 264 ---QLAQMQ----------------------------------QWT-------------------TV-------N----- 275 (349)
T ss_dssp ---HHHHHT----------------------------------CCE-------------------EE-------E-----
T ss_pred ---HHHHHh----------------------------------hcc-------------------CC-------C-----
Confidence 444441 000 00 0
Q ss_pred ccccCCCCCCCCCCCCccccCccccCCCCCCccccccCC-CC--CcccccccCCCeEEEEEecccCCCcchHHHHHHHHH
Q 002927 758 AFLGVGDYGDLALPNGRFGLGFKRYNTRDGSYIGFGHSG-MG--GSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCS 834 (864)
Q Consensus 758 ~~~~~g~~~~~~~~~~~~glG~~~~~~~~~~~~~~gh~G-~~--G~~~~~~P~~~~~vv~~~N~~~~~~~~~~~~~~~~~ 834 (864)
+...||+||++..... +...++|+| .. +++.+++|+.+++||+++|..........+.+++.+
T Consensus 276 -------------~~~~yGlG~~~~~~~~-g~~~~~H~G~~~G~~s~~~~~p~~~~~vvvl~N~~~~~~~~~~~~~~~~~ 341 (349)
T 1yqs_A 276 -------------STQGYGLGLRRRDLSC-GISVYGHTGTVQGYYTYAFASKDGKRSVTALANTSNNVNVLNTMARTLES 341 (349)
T ss_dssp -------------TTEEECSSCEEEECTT-SCEEEEEEEEETTEEEEEEECTTSSEEEEEEESEESCHHHHHHHHHHHHH
T ss_pred -------------CCCCceeeEEeeccCC-CceEEEECCccCCeeEEEEEecCCCEEEEEEEcCCCCcccchHHHHHHHH
Confidence 0137999999865322 345799999 33 566699999999999999987554433445566665
Q ss_pred Hh
Q 002927 835 EL 836 (864)
Q Consensus 835 ~l 836 (864)
++
T Consensus 342 ~~ 343 (349)
T 1yqs_A 342 AF 343 (349)
T ss_dssp HH
T ss_pred Hh
Confidence 55
|
| >1ci9_A ESTB, protein (carboxylesterase); hydrolase, caboxylesterase; HET: DFP; 1.80A {Burkholderia gladioli} SCOP: e.3.1.1 PDB: 1ci8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-47 Score=431.15 Aligned_cols=341 Identities=23% Similarity=0.307 Sum_probs=247.4
Q ss_pred hHHHHHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCC
Q 002927 363 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 442 (864)
Q Consensus 363 ~~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ 442 (864)
..+.+.+++++++.++++.++|++++|+++|++++++++|+++...+.|++++|+|+|+|+||+|||+++++|+|+|+|+
T Consensus 16 ~~l~~~l~~~~~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~a~~~~~~p~~~dt~f~iaSvtK~~Ta~~i~~Lve~G~l~ 95 (392)
T 1ci9_A 16 ASLAARLDAVFDQALRERRLVGAVAIVARHGEILYRRAQGLADREAGRPMREDTLFRLASVTKPIVALAVLRLVARGELA 95 (392)
T ss_dssp HHHHHHHHHHHHHHHHTTSCSEEEEEEEETTEEEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEEEEECCeEEEEEEEeccccCCCCCCCCCCeEeeeechHHHHHHHHHHHHHcCCCC
Confidence 46778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCchhhhcccCcc----CCCCccCHHhHhcCCCCCCCCCCCc----c------CCCCcCCCCHHHHHHHHHccCCCCCC
Q 002927 443 LEENIANIWPEFKS----NGKDLIKVHHVLNHTSGLHNVSVDL----S------SENPLLICDWDECLNRIALSAPETEP 508 (864)
Q Consensus 443 ld~~v~~ylP~~~~----~~~~~ITir~LLtHtSGl~~~~~~~----~------~~~~~~~~~~~~~~~~l~~~~~~~~p 508 (864)
||+||++|||+|.. ..+++|||||||+|||||+...... . ...+....+.+++++.+...++.++|
T Consensus 96 ldd~v~~ylP~~~~~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 175 (392)
T 1ci9_A 96 LDAPVTRWLPEFRPRLADGSEPLVTIHHLLTHTSGLGYWLLEGAGSVYDRLGISDGIDLRDFDLDENLRRLASAPLSFAP 175 (392)
T ss_dssp TTSBGGGTCTTCCCBCTTSCCCCCBHHHHHHTCSSCCCHHHHCTTSHHHHHTCCCSSSCCSSCHHHHHHHHHHSBCSSCT
T ss_pred CCCcHHHHhhhhccccCCcccCCCcHHHHhhccCCCCCCccccccchhHHHhhhccCCcCCCCHHHHHHHHhcCCcccCC
Confidence 99999999999964 2468999999999999998642100 0 00112234789999999999999999
Q ss_pred CCceecccCcHHHHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCC
Q 002927 509 GQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLR 588 (864)
Q Consensus 509 g~~~~Ysn~~~~~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~ 588 (864)
|+.|.||| +|. |||.|||++||++|++|++++||+||||++|.|.. + ...+++..|.......... ......+
T Consensus 176 G~~~~Ys~-~~~-lLg~iie~vtG~~~~~~~~~~I~~PLgm~~t~~~~-~--~~~~~a~~y~~~~~~~~~~--~~~~~~~ 248 (392)
T 1ci9_A 176 GSGWQYSL-ALD-VLGAVVERATGQPLAAAVDALVAQPLGMRDCGFVS-A--EPERFAVPYHDGQPEPVRM--RDGIEVP 248 (392)
T ss_dssp TSCCCCCT-HHH-HHHHHHHHHHTSCHHHHHHHHTHHHHTCCSCBSCC-S--CGGGBCCCEECCSSSCEEC--CTTEEEE
T ss_pred CCCeeCcC-HHH-HHHHHHHHHhCCCHHHHHHHhCCCCCCCCcCCccC-C--CcccceeeeecCCCCcccc--ccccccc
Confidence 99999998 776 99999999999999999999999999999987643 2 3455666664321110000 0000000
Q ss_pred CCCCCCcchhhhhhcccccccccccccccccCCcceecCHHHHHHHHHHHHcC-CCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002927 589 LPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADG-GVVPPPHSRLSKPPLGSHPHIPKFPS 667 (864)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~g-g~l~~~~~~~~~~~~~~~~~~~~~~~ 667 (864)
.+.++... ....+... ........|+||++||++||+||+++|+++ .+++++
T Consensus 249 ~~~g~~~~-----~~~~~~~~--~~~~~~~~g~ggl~sTa~Dl~~~~~~ll~~~~lls~~-------------------- 301 (392)
T 1ci9_A 249 LPEGHGAA-----VRFAPSRV--FEPGAYPSGGAGMYGSADDVLRALEAIRANPGFLPET-------------------- 301 (392)
T ss_dssp CCTTSCSE-----EEECGGGG--GCTTSCCCTTTCCEECHHHHHHHHHHHHHCSSSSCHH--------------------
T ss_pred cccccccc-----cccccccc--cCCcccCcCCcccccCHHHHHHHHHHHhCCCcccCHH--------------------
Confidence 00000000 00000000 001122357899999999999999999994 455433
Q ss_pred CcccccccchhHHHHHHHhhcCCCCCCCccccccCCCCccccccCccchhhhhccccCCCCCCCccCCCCCCCCCCcccc
Q 002927 668 HETSKKQKGTKKELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVR 747 (864)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (864)
++++|..++... ..
T Consensus 302 -------------~~~~m~~~~~~~-----------------------------------------------------~~ 315 (392)
T 1ci9_A 302 -------------LADAARRDQAGV-----------------------------------------------------GA 315 (392)
T ss_dssp -------------HHHHHHSCSSCG-----------------------------------------------------GG
T ss_pred -------------HHHHHhccCcCC-----------------------------------------------------cc
Confidence 555553211100 00
Q ss_pred cccCCcccccccccCCCCCCCCCCCCccccCccccCCC-----CCCccccccCCCCCcccccccCCCeEEEEEecccCCC
Q 002927 748 KIFNNPRIHDAFLGVGDYGDLALPNGRFGLGFKRYNTR-----DGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFG 822 (864)
Q Consensus 748 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~glG~~~~~~~-----~~~~~~~gh~G~~G~~~~~~P~~~~~vv~~~N~~~~~ 822 (864)
....+..+||+||++.... ......+||.|.+|++.|++|+.+++||+++|+...+
T Consensus 316 -------------------~~~~~~~~yGlG~~~~~~~~~~~~~~~~g~~g~~G~~gs~~~~~P~~~~~vv~l~N~~~~~ 376 (392)
T 1ci9_A 316 -------------------ETRGPGWGFGYLSAVLDDPAAAGTPQHAGTLQWGGVYGHSWFVDRALGLSVLLLTNTAYEG 376 (392)
T ss_dssp -------------------CTTSTTEEECSSSEEESCHHHHTCSSCTTCEEEEETTTEEEEEEGGGTEEEEEEESEETHH
T ss_pred -------------------cCCCCCCceeeeEEEecccccccCCCCCCeEeeCCccccEEEEECCCCEEEEEEEecCCCc
Confidence 0000235799999986421 1233468999999999999999999999999986543
|
| >2qz6_A Beta-lactamase; psychrophIle, cold adaptation, antibiotic resistance, hydrolase, periplasm; 2.26A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-47 Score=426.38 Aligned_cols=240 Identities=20% Similarity=0.279 Sum_probs=199.8
Q ss_pred HHHHHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCc
Q 002927 364 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKL 443 (864)
Q Consensus 364 ~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~l 443 (864)
++.+.+++.+++.++++.+||++++|+++|++++. +||+++.+.+.|++++|+|+|+|+||+|||+++++|+|+|+|+|
T Consensus 3 ~~~~~l~~~~~~~~~~~~~pG~~v~v~~~g~~~~~-~~G~~~~~~~~~~~~~t~f~iaS~tK~~ta~~i~~Lve~G~l~L 81 (358)
T 2qz6_A 3 DIRQVVDSTVEPLMQQQDIAGLSVAVIQNGKAQYF-NYGVANKDSKQPITENTLFEIGSVSKTFTATLAGYALANGKLKL 81 (358)
T ss_dssp CHHHHHHHHHHHHHHHTTCSEEEEEEEETTEEEEE-EEEBSCTTTCCBCCTTCBEECGGGHHHHHHHHHHHHHHTTSCCT
T ss_pred hHHHHHHHHHHHHHHhCCCCeEEEEEEECCEEEEE-EEEeeccCCCCCCCCCCEEechhhHHHHHHHHHHHHHHcCCCCC
Confidence 46788899999999889999999999999999885 89999999999999999999999999999999999999999999
Q ss_pred cCchhhhcccCccCCCCccCHHhHhcCCCC-CCCCCCCccCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHH
Q 002927 444 EENIANIWPEFKSNGKDLIKVHHVLNHTSG-LHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWL 522 (864)
Q Consensus 444 d~~v~~ylP~~~~~~~~~ITir~LLtHtSG-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~l 522 (864)
|+||.+|||+|+...+++|||||||+|||| ++...+. ...+.+++++.+...++.++||+.|.|||.+|. |
T Consensus 82 ddpv~~ylP~~~~~~~~~iTir~LL~HtSG~l~~~~~~-------~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~~~-l 153 (358)
T 2qz6_A 82 SDPASQYLPALRGDKFDHISLLNLGTYTAGGLPLQFPE-------ESDNTGKMISYYQHWKPAFAPGTQRLYSNPSIG-L 153 (358)
T ss_dssp TSBGGGGCGGGTTSGGGSSBHHHHHTTCSSCCCSSCC------------CHHHHHHHHHCCCSSCTTTEECCCHHHHH-H
T ss_pred CCcHHHhCccccCCCCCCccHHHHhhCcCCCCCccCcc-------ccCCHHHHHHHHHhCCCCCCCCCceeeCHHHHH-H
Confidence 999999999998766789999999999999 9875432 134567899999999999999999999999999 9
Q ss_pred HHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhhhhh
Q 002927 523 CGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLA 602 (864)
Q Consensus 523 Lg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 602 (864)
||.|||++||++|.+|++++||+||||++|.|. .+.....+++..|...... .. ..
T Consensus 154 Lg~iie~vtg~~~~~~~~~~i~~PLgm~~t~~~-~~~~~~~~~a~gy~~~~~~--~~---~~------------------ 209 (358)
T 2qz6_A 154 FGHLAAQSLGQPFEKLMEQTVLPKLGLKHTFIS-VPETQMSLYAQGYDKAGKP--VR---VS------------------ 209 (358)
T ss_dssp HHHHHHHTTTSCHHHHHHHTTTGGGTCSSEESS-CCGGGGGGBCCCBCTTSCB--CC---CC------------------
T ss_pred HHHHHHHHhCCCHHHHHHHhcccccCCcccccC-CCchhccceeeeeccCCce--ec---cC------------------
Confidence 999999999999999999999999999998653 3444445555555322110 00 00
Q ss_pred cccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 603 AITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
+.+ ...++||++||++||+||++++++++.+++.
T Consensus 210 ---------~~~--~~~~aggl~sT~~Dl~~~~~~ll~~~~l~~~ 243 (358)
T 2qz6_A 210 ---------PGA--LDAEAYGIKTSTSDLIHYVEVNMHPAKLEKP 243 (358)
T ss_dssp ---------CCT--THHHHTCCEECHHHHHHHHHHHHCGGGSCHH
T ss_pred ---------CCc--ccCCcceEEEcHHHHHHHHHHHhCCCCCCHH
Confidence 000 0125789999999999999999999877533
|
| >1zkj_A CMY-10, extended-spectrum beta-lactamase; plasmid, class C, hydrolase; 1.55A {Enterobacter aerogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-47 Score=425.93 Aligned_cols=237 Identities=20% Similarity=0.224 Sum_probs=201.9
Q ss_pred hHHHHHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCC
Q 002927 363 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 442 (864)
Q Consensus 363 ~~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ 442 (864)
.++.+.+++.+++.++++.+||++++|+++|++++. +||+++.+.+.|++++|+|+|+|+||+|||+++++|+|+|+|+
T Consensus 7 ~~~~~~l~~~~~~~~~~~~~~G~~v~V~~~g~~~~~-~~G~~~~~~~~~~~~~t~f~iaS~tK~~Ta~~i~~Lve~G~l~ 85 (359)
T 1zkj_A 7 DPLRPVVDASIQPLLKEHRIPGMAVAVLKDGKAHYF-NYGVANRESGAGVSEQTLFEIGSVSKTLTATLGAYAVVKGAMQ 85 (359)
T ss_dssp CTTHHHHHHHHHHHHHHTTCSEEEEEEEETTEEEEE-EEEBSCTTTCCBCCTTCBEECGGGHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHcCCCCeEEEEEEECCEEEEE-EEEecccccCCCCCCCCeEechhhHHHHHHHHHHHHHHcCCCC
Confidence 356678899999988889999999999999999986 8999999999999999999999999999999999999999999
Q ss_pred ccCchhhhcccCccCCCCccCHHhHhcCCCC-CCCCCCCccCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHH
Q 002927 443 LEENIANIWPEFKSNGKDLIKVHHVLNHTSG-LHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGW 521 (864)
Q Consensus 443 ld~~v~~ylP~~~~~~~~~ITir~LLtHtSG-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~ 521 (864)
|||||.+|||+|+...+++|||||||+|||| ++.+.+. ...+.+++++.+...++.++||+.|.|||.+|.
T Consensus 86 Ldd~v~~ylP~~~~~~~~~iTir~LL~HtSG~l~~~~~~-------~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~y~- 157 (359)
T 1zkj_A 86 LDDKASRHAPWLKGSAFDSITMGELATYSAGGLPLQFPE-------EVDSSEKMRAYYRQWAPVYSPGSHRQYSNPSIG- 157 (359)
T ss_dssp TTSBGGGGCGGGTTSGGGSSBHHHHHTTCSSCCCSSCCT-------TCCSHHHHHHHHHHCCCSSCTTTEECCCHHHHH-
T ss_pred CCCcHHHhCcccccCCCCCcCHHHHhcCcCCCCCccCcc-------ccCCHHHHHHHHHhCCCCCCCCCceeecHHHHH-
Confidence 9999999999998766789999999999999 9976432 235788999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhhhh
Q 002927 522 LCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQL 601 (864)
Q Consensus 522 lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 601 (864)
|||.|||++||++|.+|++++||+||||++|.|. .+.....+++..|...... .. ..
T Consensus 158 lLg~iie~vtg~~~~~~~~~~i~~PLgm~~t~~~-~~~~~~~~~a~gy~~~~~~--~~---~~----------------- 214 (359)
T 1zkj_A 158 LFGHLAASSLKQPFAPLMEQTLLPGLGMHHTYVN-VPKQAMASYAYGYSKEDKP--IR---VN----------------- 214 (359)
T ss_dssp HHHHHHHHHTTSCHHHHHHHTHHHHTTCSSCBSS-CCGGGGGGBCCEECTTCCE--EC---CC-----------------
T ss_pred HHHHHHHHHhCCCHHHHHHHHcccccCCCcCccc-CCcccccCeeeeeccCCcc--cc---cC-----------------
Confidence 9999999999999999999999999999998653 4444455666666432210 00 00
Q ss_pred hcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCC
Q 002927 602 AAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGV 643 (864)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~ 643 (864)
+.+ ...++||++||++||+||++++++++.
T Consensus 215 ----------~~~--~~~~aggl~sT~~Dl~~~~~~ll~~~~ 244 (359)
T 1zkj_A 215 ----------PGM--LADEAYGIKTSSADLLRFVKANIGGVD 244 (359)
T ss_dssp ----------CCT--THHHHHCCEECHHHHHHHHHHTTTCCS
T ss_pred ----------CCc--cCCCCCeeEeCHHHHHHHHHHHhcCCC
Confidence 000 012678999999999999999999886
|
| >2wzx_A Beta-lactamase; inhibitor, hydrolase, antibiotic resistance; HET: ZX0; 1.40A {Pseudomonas aeruginosa} PDB: 2wzz_A* 3s1y_A* 3s22_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-47 Score=426.28 Aligned_cols=241 Identities=22% Similarity=0.274 Sum_probs=202.3
Q ss_pred hHHHHHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCC
Q 002927 363 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 442 (864)
Q Consensus 363 ~~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ 442 (864)
.++.+.+++.+++.++++.+||++++|+++|++++. +||+++.+.+.|++++|+|+|+|+||+|||+++++|+|+|+|+
T Consensus 6 ~~~~~~l~~~i~~~~~~~~~~G~~v~v~~~g~~~~~-~~G~~~~~~~~p~~~~t~f~iaS~tK~~Ta~~i~~Lve~G~l~ 84 (371)
T 2wzx_A 6 DRLKALVDAAVQPVMKANDIPGLAVAISLKGEPHYF-SYGLASKEDGRRVTPETLFEIGSVSKTFTATLAGYALTQDKMR 84 (371)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEEEETTEEEEE-EEEBSCTTTCCBCCTTCEEECGGGHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEEECCEEEEE-EEeeccccCCCCCCCCCEEeehhhHHHHHHHHHHHHHHcCCCC
Confidence 467788999999999889999999999999999885 8999999999999999999999999999999999999999999
Q ss_pred ccCchhhhcccCccCCCCccCHHhHhcCCCC-CCCCCCCccCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHH
Q 002927 443 LEENIANIWPEFKSNGKDLIKVHHVLNHTSG-LHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGW 521 (864)
Q Consensus 443 ld~~v~~ylP~~~~~~~~~ITir~LLtHtSG-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~ 521 (864)
||+||.+|||+|+...+++|||||||+|||| ++...+.. ...+.+++++.+.+.++.++||+.|.|||.+|.
T Consensus 85 Ldd~v~~ylP~~~~~~~~~ITir~LL~HtSG~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~~~- 157 (371)
T 2wzx_A 85 LDDRASQHWPALQGSRFDGISLLDLATYTAGGLPLQFPDS------VQKDQAQIRDYYRQWQPTYAPGSQRLYSNPSIG- 157 (371)
T ss_dssp TTSBGGGGCGGGTTSGGGGCBHHHHHTTCSSCCCSSCCTT------CCSCHHHHHHHHHHCCCSSCTTSEECCCHHHHH-
T ss_pred CCCcHHHhCcccccCCCCCccHHHHhcCCCCCCCccCCcc------ccCCHHHHHHHHHhCCCCCCCCCceeecHHHHH-
Confidence 9999999999998766789999999999999 98754321 113788999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhhhh
Q 002927 522 LCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQL 601 (864)
Q Consensus 522 lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 601 (864)
|||.|||++||++|.+|++++||+||||++|.|. .+.....+++..|...... .. ..
T Consensus 158 lLg~iie~vtG~~~~~~~~~~i~~PLGm~~t~~~-~~~~~~~~~a~gy~~~~~~--~~---~~----------------- 214 (371)
T 2wzx_A 158 LFGYLAARSLGQPFERLMEQQVFPALGLEQTHLD-VPEAALAQYAQGYGKDDRP--LR---VG----------------- 214 (371)
T ss_dssp HHHHHHHHHHTSCHHHHHHHTHHHHTTCSSEESS-CCGGGGGGBCCCBCGGGCB--CC---CC-----------------
T ss_pred HHHHHHHHHhCCCHHHHHHHhccccCCCCccccC-CCccccccccccccCCCCc--cc---cC-----------------
Confidence 9999999999999999999999999999998653 3433444555554322110 00 00
Q ss_pred hcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCC
Q 002927 602 AAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPP 646 (864)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~ 646 (864)
+.+ ...++||++||++||+||++++++++.+++
T Consensus 215 ----------~~~--~~~~aggl~sT~~Dl~~~~~~ll~~~~l~~ 247 (371)
T 2wzx_A 215 ----------PGP--LDAEGYGVKTSAADLLRFVDANLHPERLDR 247 (371)
T ss_dssp ----------CCT--THHHHHCCEEEHHHHHHHHHHHHCGGGSCH
T ss_pred ----------Ccc--ccCCcCeEEECHHHHHHHHHHHhCCCCCCH
Confidence 000 012678999999999999999999987753
|
| >2ffy_A Beta-lactamase; AMPC, deacylation, transition state, boronic acid, hydrolase; HET: SM3; 1.07A {Escherichia coli} SCOP: e.3.1.1 PDB: 1pi5_A* 1pi4_A* 2hds_A* 1c3b_A* 1fco_A* 1ga9_A* 1iem_A* 1kds_A* 1kdw_A* 1ke0_A* 1ke3_A* 1iel_A 1kvm_A* 1l2s_A* 1ll5_A* 1ll9_A* 1llb_A* 1mxo_A* 1my8_A* 1xgi_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-47 Score=425.15 Aligned_cols=240 Identities=22% Similarity=0.285 Sum_probs=204.2
Q ss_pred hHHHHHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCC
Q 002927 363 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 442 (864)
Q Consensus 363 ~~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ 442 (864)
.++.+.+++.+++.++++.+||++++|+++|++++. +||+++.+.+.|++++|+|+|+|+||+|||+++++|+|+|+|+
T Consensus 3 ~~~~~~l~~~~~~~~~~~~~~G~~v~v~~~g~~~~~-~~G~~~~~~~~~~~~~t~f~iaS~tK~~Ta~~i~~Lve~G~l~ 81 (358)
T 2ffy_A 3 QQINDIVHRTITPLIEQQKIPGMAVAVIYQGKPYYF-TWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIK 81 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEEEETTEEEEE-EEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHTTSCC
T ss_pred hHHHHHHHHHHHHHHhcCCCceEEEEEEECCEEEEE-EEeecccccCCCCCCCCeEEeeeeHHHHHHHHHHHHHHcCCCC
Confidence 457788999999999889999999999999999986 8999999999999999999999999999999999999999999
Q ss_pred ccCchhhhcccCccCCCCccCHHhHhcCCCC-CCCCCCCccCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHH
Q 002927 443 LEENIANIWPEFKSNGKDLIKVHHVLNHTSG-LHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGW 521 (864)
Q Consensus 443 ld~~v~~ylP~~~~~~~~~ITir~LLtHtSG-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~ 521 (864)
||+||.+|||+|+...+++|||||||+|||| ++...+. ...+.+++++.+...++.++||+.|.|||.+|.
T Consensus 82 Ldd~v~~ylP~~~~~~~~~iTir~LL~HtSG~l~~~~~~-------~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~~~- 153 (358)
T 2ffy_A 82 LSDPTTKYWPELTAKQWNGITLLHLATYTAGGLPLQVPD-------EVKSSSDLLRFYQNWQPAWAPGTQRLYANSSIG- 153 (358)
T ss_dssp TTSBHHHHCTTCCSGGGTTCBHHHHHHTCSSCCCSSCCT-------TCCSHHHHHHHHHHCCCSSCTTSEECCCHHHHH-
T ss_pred CCCcHHHhCcccccCCCCCcCHHHHhhCcCCCCCccCcc-------ccCCHHHHHHHHHhCCCCCCCCCceeecHHHHH-
Confidence 9999999999998766789999999999999 9875322 235778999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhhhh
Q 002927 522 LCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQL 601 (864)
Q Consensus 522 lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 601 (864)
|||.|||++||++|++|++++||+||||++|.|. .++....+.+..|.. .. ... ..|
T Consensus 154 lLg~iie~vtg~~~~~~~~~~i~~PLgm~~t~~~-~~~~~~~~~a~gy~~-~~--~~~---~~~---------------- 210 (358)
T 2ffy_A 154 LFGALAVKPSGLSFEQAMQTRVFQPLKLNHTWIN-VPPAEEKNYAWGYRE-GK--AVH---VSP---------------- 210 (358)
T ss_dssp HHHHHHTGGGTSCHHHHHHHHTTTTTTCTTCBSS-CCGGGGGGBCCEEET-TE--EEC---CCC----------------
T ss_pred HHHHHHHHHhCCCHHHHHHHhcccccCCCCcccC-CCcccccCeeeeEec-CC--ccc---ccc----------------
Confidence 9999999999999999999999999999998663 344444556666543 11 000 000
Q ss_pred hcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 602 AAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
.+ ...++||++||++||+||++++++++.++++
T Consensus 211 -----------~~--~~~~aggl~sT~~Dl~~~~~~ll~~~~~~~~ 243 (358)
T 2ffy_A 211 -----------GA--LDAEAYGVKSTIEDMARWVQSNLKPLDINEK 243 (358)
T ss_dssp -----------CT--THHHHTCCEECHHHHHHHHHHHHCGGGCSSH
T ss_pred -----------cc--ccCCCceEEECHHHHHHHHHHHhCCCCCChH
Confidence 00 0126899999999999999999999988765
|
| >2qmi_A PBP related beta-lactamase; PAB87, octamer, LU-HPDO3A, archaea, hydrolase; HET: DO3; 2.20A {Pyrococcus abyssi} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-46 Score=430.99 Aligned_cols=242 Identities=24% Similarity=0.368 Sum_probs=195.4
Q ss_pred HHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCc
Q 002927 367 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEEN 446 (864)
Q Consensus 367 ~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~ 446 (864)
+.+++++++.++++.+||++++|+++|+++++++||+++...+.|++++|+|+|||+||+|||++|++|+|+|+|+||+|
T Consensus 4 ~~l~~~i~~~~~~~~~pG~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dT~f~iaSvTK~fTa~~i~~Lve~G~l~Lddp 83 (447)
T 2qmi_A 4 GKLESFIVEKMAERKVPGISISIIKDGDVVYAKGFGYRNVEARLPSTPETIYGIGSITKSFTALAIMKLVEEGGLSLDDP 83 (447)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEEEEEETTTTEECCSSCBEECGGGHHHHHHHHHHHHHHTTSCCTTSB
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEEECCEEEEEEeeeccccccCCCCCCCCEEecceehHHHHHHHHHHHHHcCCCCCCCc
Confidence 56788888888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcc-cCccCCCCccCHHhHhcCCCCCCCCCCC------ccCC-CCcCCCCHHHHHHHHHc--cCCCCCCCCceeccc
Q 002927 447 IANIWP-EFKSNGKDLIKVHHVLNHTSGLHNVSVD------LSSE-NPLLICDWDECLNRIAL--SAPETEPGQEQLYHY 516 (864)
Q Consensus 447 v~~ylP-~~~~~~~~~ITir~LLtHtSGl~~~~~~------~~~~-~~~~~~~~~~~~~~l~~--~~~~~~pg~~~~Ysn 516 (864)
|.+||| +|...+ ++|||||||+|||||+.+... .... ......+.+++++.+.. .++.++||+.|.|||
T Consensus 84 v~~ylP~~~~~~~-~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~PG~~~~Ysn 162 (447)
T 2qmi_A 84 VEKFVNIKLRPFG-EPVTVHHLLTHSSGIPSLGYAEAFIDGMVGGDNWLPVSTPEETIAFARDMEKWAVAKPGERFFYLN 162 (447)
T ss_dssp GGGTSSSCCCGGG-CCCBHHHHHTTCSSCCBCSHHHHHHHHHTTCSCCCCCCSHHHHHHHGGGGGGGCCSCTTSCCCCCH
T ss_pred HHHhCChhhcCCC-CCCcHHHHhhccCCCCCCCcchhhhhhhccccccCCCCCHHHHHHHHHhcccccccCCCCceeEch
Confidence 999999 997654 789999999999999975420 0000 01123467888888765 468899999999999
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcc
Q 002927 517 LSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPD 596 (864)
Q Consensus 517 ~~~~~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 596 (864)
.||. |||.|||++||++|++|++++||+||||++|.|.........+.+..|....+....+
T Consensus 163 ~gy~-lLg~iiE~vtG~~~~~~~~~~I~~PLGm~~t~~~~~~~~~~~~~a~~y~~~~~g~~~~----------------- 224 (447)
T 2qmi_A 163 TGYV-LLGKIIEKVSGVSYEEYIKKKILEPLGMNRSYFFKEEVEKDKDVAMGYILDKEGRLVP----------------- 224 (447)
T ss_dssp HHHH-HHHHHHHHHHSSCHHHHHHHHTTTTTTCTTCBSSHHHHTTCSCBCCEEEECTTSCEEE-----------------
T ss_pred HHHH-HHHHHHHHHhCCCHHHHHHHHhccccCCCCcccccccccccCcccccceeCCCCCCcc-----------------
Confidence 9999 9999999999999999999999999999999764221112234555553221110000
Q ss_pred hhhhhhcccccccccccccccccCCcceecCHHHHHHHHHHHHcCC
Q 002927 597 KISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGG 642 (864)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg 642 (864)
. .......|+||++||++||+||+++++++|
T Consensus 225 ------------~---~~~~~~~~aggl~sT~~Dla~~~~~ll~~g 255 (447)
T 2qmi_A 225 ------------Q---PFPYGITADGGLLSSVLDLAKYLKMYIERD 255 (447)
T ss_dssp ------------E---CCCTTCCTTTCCEECHHHHHHHHHHHHTTC
T ss_pred ------------c---cCcccccCCCccccCHHHHHHHHHHHHhCC
Confidence 0 000134589999999999999999999885
|
| >3hlc_A Transesterase, LOVD; alpha/beta hydrolase fold, transferase; HET: PG4; 2.00A {Aspergillus terreus} PDB: 3hld_A* 3hlf_A* 3hle_A* 3hlg_A* 3hlb_A 3hl9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=430.14 Aligned_cols=361 Identities=16% Similarity=0.174 Sum_probs=251.7
Q ss_pred chHHHHHHHHHHHHhcccCccceeEEEEe-ecCeEEEEeeeeccCCCCCC-----CCCCCCccccccccHHHHHHHHHHH
Q 002927 362 HSDVEAKLRDFLVELGNDGKILGIQVCAY-KDGEVIIDTSAGMLGRYDPR-----PVQPDSLFPVFSVTKGITAGMLHWL 435 (864)
Q Consensus 362 ~~~l~~~l~~~l~~~~~~~~~~G~~v~v~-~~g~~v~~~~~G~~~~~~~~-----~~~~~t~f~i~SiTK~~ta~~i~~l 435 (864)
..++.+.+++++++.++++.++|++++|+ ++|++++++++|+++.+.+. |+++||+|+|+|+||+||++++++|
T Consensus 29 ~~~~~~~l~~~l~~~~~~~~~pG~~v~vv~~~G~iv~~~~~G~~~~~~~~~~~~~p~~~dt~f~i~S~TK~~ta~~i~~L 108 (432)
T 3hlc_A 29 AAGPVVLMETAFRKAVESRQIPGAVIMARDASGNLNYTRCFGARTVRRDENNQLPPLQVDTPCRLASATKLLTTIMVLQC 108 (432)
T ss_dssp CCCHHHHHHHHHHHHHHTTSCSEEEEEEEESSSSCEEEEEEEBSCSSCCTTSCCCBCCTTCCEECGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCeEEEEEEecCCeEEEEeeeeeccccccCccCCCCCCCCCEEEchhhHHHHHHHHHHHH
Confidence 34677889999999999999999999988 89999999999999999887 9999999999999999999999999
Q ss_pred HHCCCCCccCchhhhcccCccC-----------------CCCccCHHhHhcCCCCCCCCCCCcc-----CCCCcCCCCHH
Q 002927 436 VDNGKLKLEENIANIWPEFKSN-----------------GKDLIKVHHVLNHTSGLHNVSVDLS-----SENPLLICDWD 493 (864)
Q Consensus 436 ve~G~l~ld~~v~~ylP~~~~~-----------------~~~~ITir~LLtHtSGl~~~~~~~~-----~~~~~~~~~~~ 493 (864)
+|+|+|+||+||++|||+|... .++ |||||||+|||||+....... ..........
T Consensus 109 ve~G~l~Lddpv~~ylPe~~~~~v~~~~~~~~~~~~~~~~~~-ITir~LLthtSGl~~~~~~~~~~~~~~~~~~~~~~~- 186 (432)
T 3hlc_A 109 MERGLVDLDETVDRLLPDLSAMPVLEGFDDAGNARLRERRGK-ITLRHLLTHTSGLSYVFLHPLLREYMAQGYLQSAEK- 186 (432)
T ss_dssp HHTTSCCTTSBTTTTCHHHHTCCEEEEECTTCCEEEECCSSC-CBHHHHHTTCSSCCCGGGCHHHHHHHHTTCCCC----
T ss_pred HHCCCCCCCCcHHHhhhhhcccccccccccccCccccCCCCC-CcHHHHHhCcCCCCCCCCChhHHHHHhcCCCCCCcH-
Confidence 9999999999999999998652 234 999999999999987432110 0000001122
Q ss_pred HHHHHHHccCCCCCCCCceecccCcHHHHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCC-CCCccccccceeccC
Q 002927 494 ECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGI-PPGVESRLASLTIDT 572 (864)
Q Consensus 494 ~~~~~l~~~~~~~~pg~~~~Ysn~~~~~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~-~~~~~~~~a~~~~~~ 572 (864)
+.+..+...++.++||+.|.|| .+|. +||.|||++||++|.+|++++||+||||++|.|... .+....+++..|...
T Consensus 187 ~~~~~~~~~pl~~~PG~~~~Ys-~~~~-lLg~iie~vtG~~~~~~~~~~I~~PLGm~~t~f~~~~~~~~~~~~a~~~~~~ 264 (432)
T 3hlc_A 187 FGIQSRLAPPAVNDPGAEWIYG-TNLD-WAGKLVERATGLDLEQYLQENICAPLGITDMTFKLQQRPDMLARRADQTHRN 264 (432)
T ss_dssp -----CSCSCBSSCTTSCCCCC-THHH-HHHHHHHHHHSSCHHHHHHHHTHHHHTCCSEESCGGGCHHHHHHCCCEEEEC
T ss_pred HHHHHHhcCCCccCCCCCeecc-hHHH-HHHHHHHHHHCCCHHHHHHHHHhcccCCccceecCCCChHHhcccccceeEC
Confidence 2233334578899999999999 7998 999999999999999999999999999999977422 134456667666543
Q ss_pred CcccccccCCCCCCCCCCCCCCcchhhhhhcccccccccccccccccCCcceecCHHHHHHHHHHHHcCC--CCCCCCCC
Q 002927 573 DDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGG--VVPPPHSR 650 (864)
Q Consensus 573 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg--~l~~~~~~ 650 (864)
.+..... .|. ............|+||++||++||+||+++++++| ++++
T Consensus 265 ~~g~~~~----~~~---------------------~~~~~~~~~~~~g~gGl~sTa~Dlarf~~~ll~~g~~lLs~---- 315 (432)
T 3hlc_A 265 SADGRLR----YDD---------------------SVYFRADGEECFGGQGVFSSPGSYMKVLHSLLKRDGLLLQP---- 315 (432)
T ss_dssp TTTCCEE----EEC---------------------CGGGTCCCSSCCTTTCCEECHHHHHHHHHHHHHTCSSSSCH----
T ss_pred CCCceee----cCC---------------------cccccCCCCCCcCCCcceECHHHHHHHHHHHHhCCCccCCH----
Confidence 2221111 000 00001111234588999999999999999999865 2222
Q ss_pred CCCCCCCCCCCCCCCCCCcccccccchhHHHHHHHhhcCCCCCCCccccccCCCCccccccCccchhhhhccccCCCCCC
Q 002927 651 LSKPPLGSHPHIPKFPSHETSKKQKGTKKELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTS 730 (864)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 730 (864)
+++++|..++.........
T Consensus 316 -----------------------------~~v~~m~~~~~~~~~~~~~-------------------------------- 334 (432)
T 3hlc_A 316 -----------------------------QTVDLMFQPALEPRLEEQM-------------------------------- 334 (432)
T ss_dssp -----------------------------HHHHHHTSCCCCHHHHHHH--------------------------------
T ss_pred -----------------------------HHHHHHhccCCCchhhhhh--------------------------------
Confidence 2556553322211100000
Q ss_pred CccCCCCCCCCCCcccccccCCcccccccccCCCCCCCCCCCCccccCccccCCC-----CCCccccccCCCCCcccccc
Q 002927 731 TTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGLGFKRYNTR-----DGSYIGFGHSGMGGSTGFCD 805 (864)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~glG~~~~~~~-----~~~~~~~gh~G~~G~~~~~~ 805 (864)
...+..+.. ..+.. | .+.....+||+||++...+ ..+...|+|.|++|+++|+|
T Consensus 335 ----------------~~~~~~~~~-~~~~~-~---~~~~~~~gyGlg~~~~~~~~~~~~~~~~g~~~w~G~~g~~~~vd 393 (432)
T 3hlc_A 335 ----------------NQHMDASPH-INYGG-P---MPMVLRRSFGLGGIIALEDLDGENWRRKGSLTFGGGPNIVWQID 393 (432)
T ss_dssp ----------------HHHHHTCTT-TCTTT-T---SCSSCCEEECSSSEEESSCSSTTSSCCTTCEEEEETTTEEEEEE
T ss_pred ----------------hhhcccccc-ccccc-C---CCCCCCCcCccceEEEecCccCCCCCCCceeEeCCcccCeEEEE
Confidence 000000000 00000 0 0011346899999986532 22345799999999999999
Q ss_pred cCCCeEEEEEecccCCCc-----chHHHHHHHHHHhC
Q 002927 806 VNNRFAIAVTLNKMSFGA-----TTGRIIHFVCSELN 837 (864)
Q Consensus 806 P~~~~~vv~~~N~~~~~~-----~~~~~~~~~~~~l~ 837 (864)
|++++++|+++|.++.++ ...++.++|.++|+
T Consensus 394 P~~~l~~v~~tn~~p~~~~~~~~~~~~~~~~vy~al~ 430 (432)
T 3hlc_A 394 PKAGLCTLAFFQLEPWNDPVCRDLTRTFEHAIYAQYQ 430 (432)
T ss_dssp TTTTEEEEEECCEESSSCHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCEEEEEEEcCCCCcCcchHHHHHHHHHHHHHHhh
Confidence 999999999999987664 35667777777764
|
| >3tg9_A Penicillin-binding protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.20A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-47 Score=425.59 Aligned_cols=241 Identities=21% Similarity=0.268 Sum_probs=192.6
Q ss_pred HHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 369 LRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 369 l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
+++++++.++++.+||+ ++|+++|+++++++||+++...+.|++++|+|+|+|+||+|||+++++|+|+|+|+||+||+
T Consensus 3 ld~~i~~~~~~~~~~G~-v~v~~~g~~v~~~~~G~a~~~~~~p~~~~t~f~iaSitK~~Ta~~i~~Lve~G~l~Ldd~v~ 81 (356)
T 3tg9_A 3 MKNHLHTIMEDWKLSGT-ALMKKGEDIPFIASLGFANRAERIPNEHHTRFGIASGCKLFTAIAICQLVEAGKLSFDTPLS 81 (356)
T ss_dssp CCCHHHHHHHHHTCCEE-EEEEETTSCCEEEEESEEETTTTEECCTTCBEECGGGGHHHHHHHHHHHHHHTSCCTTCBGG
T ss_pred HHHHHHHHHHhCCCCeE-EEEEECCeEEEEeeecccccccCCCCCCCCeEEcccchHHHHHHHHHHHHHcCCCCcccCHH
Confidence 35667777778899998 56889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcc-cCccCCCCccCHHhHhcCCCCCCCCCCCccC--------C-CCcCCCCHHHHHHHHHccCCCCCCCCceecccCc
Q 002927 449 NIWP-EFKSNGKDLIKVHHVLNHTSGLHNVSVDLSS--------E-NPLLICDWDECLNRIALSAPETEPGQEQLYHYLS 518 (864)
Q Consensus 449 ~ylP-~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~--------~-~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~ 518 (864)
+||| +| ++|||||||+||||++.+...... . ......+.+++++.+...++.++||+.|.|||.+
T Consensus 82 ~ylP~~~-----~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~ 156 (356)
T 3tg9_A 82 DWLDAPF-----PNVTIHHLLTHTSGVPDYFDEEITDDFEDLWKDVPMYHLRRLKDFLPLFQHAPMKFPPGHRFHYNNAG 156 (356)
T ss_dssp GTCSSCC-----TTCBHHHHHTTCSCCCCSCCC-------CGGGTSCGGGCCSGGGGGGGTTTSCCCSCTTSCCCCCHHH
T ss_pred HhCCCCc-----CCccHHHHhhCcCCCCCcccchhhhhHHHhhcccccccccCHHHHHHHHhhCCCCCCCCCCceeCcHH
Confidence 9999 77 679999999999999986432210 1 1112245677888888889999999999999999
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchh
Q 002927 519 FGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKI 598 (864)
Q Consensus 519 ~~~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 598 (864)
|. |||.|||++||++|++|++++||+||||++|.|.. ++....+.+..|....+.....
T Consensus 157 ~~-lLg~iie~vtg~~~~~~~~~~I~~PLGm~~t~~~~-~~~~~~~~a~gy~~~~~~~~~~------------------- 215 (356)
T 3tg9_A 157 FI-LLGLVVESVSGVTFQEYVEANVFQRAGMHESGYFA-FDTLPAKTALGYIDLEDGSWKT------------------- 215 (356)
T ss_dssp HH-HHHHHHHHHHSSCHHHHHHHHTHHHHTCTTCBCCB-GGGCCSSBCCCEEECTTSCEEE-------------------
T ss_pred HH-HHHHHHHHHhCCCHHHHHHHHhhcccCCcccccCC-ccccCcccceeeeecCCCceee-------------------
Confidence 98 99999999999999999999999999999997643 2333345555554221110000
Q ss_pred hhhhcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 599 SQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
+.........|+||++||++||+||+++++++.+++++
T Consensus 216 -----------~~~~~~~~~~~aggl~sT~~Dl~~~~~~ll~~~lls~~ 253 (356)
T 3tg9_A 216 -----------NLYSLPVIGGSDGGAYVTAEDMMKLWLALMRHELLNET 253 (356)
T ss_dssp -----------STTTSCSBCCSSSCCEECHHHHHHHHHHHHTTSSSCHH
T ss_pred -----------ccccCCccccCCccEEECHHHHHHHHHHHhcCCCCCHH
Confidence 00011112348899999999999999999998777655
|
| >3o3v_A Beta-lactamase, CLBP protein; alpha/beta, disulfide bridge, hydrolase; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-46 Score=412.38 Aligned_cols=237 Identities=19% Similarity=0.264 Sum_probs=191.0
Q ss_pred HHHHHHHHhcccCccceeEEEE-eecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCc
Q 002927 368 KLRDFLVELGNDGKILGIQVCA-YKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEEN 446 (864)
Q Consensus 368 ~l~~~l~~~~~~~~~~G~~v~v-~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~ 446 (864)
++++++++.++++.+||++++| +++|++++ +||+++...+.|++++|+|+|+|+||+|||+++++|+|+|+|+||+|
T Consensus 2 ~l~~~i~~~~~~~~~pG~~v~v~~~~g~~~~--~~G~~~~~~~~~~~~~t~f~i~SitK~~ta~~i~~lve~G~l~ld~~ 79 (335)
T 3o3v_A 2 RLSTLIHQRMQEAKVPALSVSVTIKGVRQRF--VYGVADVASQKANTLDTVYELGSMSKAFTGLVVQILIQEGRLRQGDD 79 (335)
T ss_dssp CHHHHHHHHHHHHTCSEEEEEEEETTEEEEE--EEEEEETTTTEECCTTCBEECGGGGHHHHHHHHHHHHHTTSCCTTSB
T ss_pred hHHHHHHHHHHhcCCCcEEEEEEEeCCEEEE--EEEeccccCCCCCCCCCEeehhhhHHHHHHHHHHHHHHCCCCCCCCc
Confidence 3677888888888999999999 99999998 89999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCcc---CCCCccCHHhHhcCCCCCCCCCCCccCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHHH
Q 002927 447 IANIWPEFKS---NGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLC 523 (864)
Q Consensus 447 v~~ylP~~~~---~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~lL 523 (864)
|.+|||++.. ...++|||||||+||||++......... ..+.+.+++.+...++.++||+.|.|||.+|. ||
T Consensus 80 v~~ylp~~~~~~~~~~~~iTi~~LL~htSGl~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~pG~~~~Ysn~~~~-lL 154 (335)
T 3o3v_A 80 IITYLPEMRLNYQGKPASLTVADFLYHTSGLPFSTLARLEN----PMPGSAVAQQLRNENLLFAPGAKFSYASANYD-VL 154 (335)
T ss_dssp HHHHCTTCCEEETTEECCCBHHHHHTTCSCCCTHHHHHHHS----CCSSCCHHHHSTTEECSSCTTSCCCCCTTHHH-HH
T ss_pred hHHhCcccccccCCCCCCccHHHHhhccCCCCCcccccccc----cCChHHHHHHHhcCCcccCCCCceeEchHHHH-HH
Confidence 9999999973 2347899999999999999743211100 11223457778888999999999999999999 99
Q ss_pred HHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhhhhhc
Q 002927 524 GGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAA 603 (864)
Q Consensus 524 g~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 603 (864)
|.|||+++|++|+++++++||+||||++|.|.. ++....+.+.+|....... .
T Consensus 155 g~iie~vtg~~~~~~~~~~i~~PLgm~~t~~~~-~~~~~~~~a~gy~~~~~~~-~------------------------- 207 (335)
T 3o3v_A 155 GAVIENVTGKTFTEVIAERLTQPLGMSATVAVK-GDEIIVNKASGYKLGFGKP-V------------------------- 207 (335)
T ss_dssp HHHHHHHHSSCHHHHHHHHTHHHHTCSSCEECC-SSCCCTTBCCCBCCSSSCC-B-------------------------
T ss_pred HHHHHHHhCCCHHHHHHHHhccccCCCccccCc-ccccccCccccccccCCCc-e-------------------------
Confidence 999999999999999999999999999997643 3334455666654321100 0
Q ss_pred ccccccccccccccccCCcceecCHHHHHHHHHHHHcCCC
Q 002927 604 ITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGV 643 (864)
Q Consensus 604 ~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~ 643 (864)
..+.+ ......|+||++||++||+||++++++++.
T Consensus 208 ----~~~~~-~~~~~~~aggl~sT~~Dl~~~~~~ll~~g~ 242 (335)
T 3o3v_A 208 ----LFHAP-LARNHVPAAYIHSTLPDMEIWIDAWLHRKA 242 (335)
T ss_dssp ----CCCSC-CCSTTHHHHTEEECHHHHHHHHHHHHTGGG
T ss_pred ----eccCc-cccCCCCCcccEeCHHHHHHHHHHHcCCCC
Confidence 00001 112234789999999999999999998764
|
| >1ei5_A D-aminopeptidase, DAP; penicillin binding protein, alpha/beta domain, beta barrel domain, hydrolase; 1.90A {Ochrobactrum anthropi} SCOP: b.61.3.1 b.61.3.1 e.3.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=422.00 Aligned_cols=238 Identities=19% Similarity=0.210 Sum_probs=187.1
Q ss_pred HHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCc
Q 002927 367 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEEN 446 (864)
Q Consensus 367 ~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~ 446 (864)
+.+++++++++++..+||++++|+++|++++++++|+++...+.|++++|+|+|||+||+|||+++++|+|+| |+||+|
T Consensus 7 ~~l~~~l~~~~~~~~~pG~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dT~f~iaSvTK~fTa~~i~~Lve~G-l~Lddp 85 (520)
T 1ei5_A 7 SALEAFVRHIPQNYKGPGGVVAVVKDGEVVLQHAWGFADLRTRTPMTLDTRMPICSVSKQFTCAVLLDAVGEP-ELLDDA 85 (520)
T ss_dssp HHHHHHHHTHHHHSCSSEEEEEEEETTEEEEEEEEEEEETTTTEECCTTCCEECGGGHHHHHHHHHHHHTCSG-GGGHHH
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEECCEEEEEEEEEecccccCCCCCCCCeEechhhHHHHHHHHHHHHHHcC-CCCCCc
Confidence 4577777777777899999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred hhhhcccCccCCCCccCHHhHhcCCCCCCCCCCCc--cCCCCcCCCCHHHHHHHHHcc-CCCCCCCCceecccCcHHHHH
Q 002927 447 IANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDL--SSENPLLICDWDECLNRIALS-APETEPGQEQLYHYLSFGWLC 523 (864)
Q Consensus 447 v~~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~--~~~~~~~~~~~~~~~~~l~~~-~~~~~pg~~~~Ysn~~~~~lL 523 (864)
|.+|||+|+. ++|||||||+|||||+++.... ....+....+.++..+.+... ++.++||+.|.|||.||. ||
T Consensus 86 v~~ylP~~~~---~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~PG~~~~Ysn~gy~-lL 161 (520)
T 1ei5_A 86 LEAYLDKFED---ERPAVRDLCNNQSGLRDYWALSVLCGADPEGVFLPAQAQSLLRRLKTTHFEPGSHYSYCNGNFR-IL 161 (520)
T ss_dssp HHHHTTTCCS---CCCCHHHHHTTCSCCCCHHHHHHHTTCCTTCCBCHHHHHHHHHTCCCCSSCTTSSCCCCHHHHH-HH
T ss_pred HHHhcCcCCC---CCCCHHHHHhCcCCCCCcccchhhccCCcccCCCHHHHHHHHHhcCcccCCCCCceEECcHHHH-HH
Confidence 9999999974 5799999999999998753210 111122234667777777764 668999999999999998 99
Q ss_pred HHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhhhhhc
Q 002927 524 GGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAA 603 (864)
Q Consensus 524 g~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 603 (864)
|.|||++||++|++|++++||+||||++|.|.... .. .+.+..|.......
T Consensus 162 g~iiE~vtG~~~~~~l~~~I~~PLGm~~t~~~~~~-~~-~~~a~gy~~~~~~~--------------------------- 212 (520)
T 1ei5_A 162 ADLIEAHTGRTLVDILSERIFAPAGMKRAELISDT-AL-FDECTGYEGDTVRG--------------------------- 212 (520)
T ss_dssp HHHHHHHHTSCHHHHHHHHTHHHHTCTTCEECCBG-GG-CCSSCCEEEETTTE---------------------------
T ss_pred HHHHHHHHCCCHHHHHHHhhhcccCCCccCcCCcc-cc-cccccccccCcccc---------------------------
Confidence 99999999999999999999999999998663211 11 12233332110000
Q ss_pred ccccccccccccccccCCcceecCHHHHHHHHHHHHcCCC
Q 002927 604 ITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGV 643 (864)
Q Consensus 604 ~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~ 643 (864)
..+ ..+. ..+.|+||++||++||+||+++|+++..
T Consensus 213 ~~~-~~~~----~~~~g~gGl~sT~~Dl~r~~~~l~~~~~ 247 (520)
T 1ei5_A 213 FLP-ATNR----IQWMGDAGICASLNDMIAWEQFIDATRD 247 (520)
T ss_dssp EEE-CCCC----BBCCSSSCEEECHHHHHHHHHHHHHTTT
T ss_pred ccc-cccc----ccccCCcccccCHHHHHHHHHHHhhCCC
Confidence 000 0011 1235889999999999999999887543
|
| >2dcf_A 6-aminohexanoate-dimer hydrolase; HET: ACA MES; 1.40A {Flavobacterium SP} SCOP: e.3.1.1 PDB: 3a65_A* 1wyc_A 2zm7_A* 2e8i_A* 2zma_A* 3a66_A* 2zm0_A* 1wyb_A 2zm8_A* 2zly_A* 2zm9_A* 2zm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-43 Score=392.97 Aligned_cols=300 Identities=17% Similarity=0.180 Sum_probs=224.2
Q ss_pred HHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCch
Q 002927 368 KLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENI 447 (864)
Q Consensus 368 ~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v 447 (864)
.++++++ +..++| ++|+++|++++++++|. ++++|+|.|+|+||+||++++++|+|+|+|+||+||
T Consensus 72 ~l~~~l~----~~~~~g--v~V~~~G~iv~~~~~G~--------~~~~t~f~i~SvTK~~Ta~~i~~Lve~G~l~lddpv 137 (392)
T 2dcf_A 72 DLEQRLE----QTYTDA--FLVLRGTEVVAEYYRAG--------FAPDDRHLLMAVSKSLCGTVVGALVDEGRIDPAQPV 137 (392)
T ss_dssp THHHHHH----HTTEEE--EEEEETTEEEEEEECTT--------CCTTCCEECTTHHHHHHHHHHHHHHHTTSCCTTSBG
T ss_pred hHHHHHH----hcCCCE--EEEEECCEEEEEeccCC--------CCCCCeeeeeeeHHHHHHHHHHHHHHCCCCCCcCcH
Confidence 4445544 466787 56789999999999984 688999999999999999999999999999999999
Q ss_pred hhhcccCccCCCCccCHHhHhcCCCCCCCCCCCccCC------------CCcCCCC-HHHHHHHHHccCCCCCCCCceec
Q 002927 448 ANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSE------------NPLLICD-WDECLNRIALSAPETEPGQEQLY 514 (864)
Q Consensus 448 ~~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~------------~~~~~~~-~~~~~~~l~~~~~~~~pg~~~~Y 514 (864)
++|||+++...+++|||||||+||||++......... .+. ..+ .+++.+.+...++.+ ||+.|.|
T Consensus 138 ~~ylPe~~~~~~~~iTir~LL~htSGl~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~-PG~~~~Y 215 (392)
T 2dcf_A 138 TEYVPELAGSVYDGPSVLQVLDMQISIDYNEDYVDPASEVQTHDRSAGWRTR-RHGDPADTYEFLTTLRGDG-STGEFQY 215 (392)
T ss_dssp GGTCGGGTTSTTSSCBHHHHHTTCBCCSCCCCSSCTTSHHHHHHHHHTSSCC-CTTCCSSHHHHHHTCCCCS-CBSSCCC
T ss_pred HHhhhhccCCCCCCCcHHHHHhcccCCCCccccCCcchHHHHHHhhcccccc-cccChHHHHHHHHhCcccC-CCceeEE
Confidence 9999999877788999999999999998542111000 000 000 356777778888888 9999999
Q ss_pred ccCcHHHHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCC
Q 002927 515 HYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQ 594 (864)
Q Consensus 515 sn~~~~~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 594 (864)
||.+|. |||.|||++||++|.+|++++||+||||++|.|...++ .
T Consensus 216 sn~~~~-lLg~iie~vtG~~~~~~l~~~I~~PLGm~~t~~~~~d~--------------------------~-------- 260 (392)
T 2dcf_A 216 CSANTD-VLAWIVERVTGLRYVEALSTYLWAKLDADRDATITVDT--------------------------T-------- 260 (392)
T ss_dssp CHHHHH-HHHHHHHHHHCSCHHHHHHHHTGGGTTCSSCCEECBCT--------------------------T--------
T ss_pred CChhHH-HHHHHHHHHhCCCHHHHHHHHhhhhcCCCCcceeeeCC--------------------------C--------
Confidence 999998 99999999999999999999999999999886532110 0
Q ss_pred cchhhhhhcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 002927 595 PDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQ 674 (864)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (864)
....++||+++|++||+||+++++++|.+.+++ +.
T Consensus 261 ---------------------g~~~~~ggl~sT~~Dlar~~~~ll~~G~~~g~~----------------ll-------- 295 (392)
T 2dcf_A 261 ---------------------GFGFANGGVSCTARDLARVGRMMLDGGVAPGGR----------------VV-------- 295 (392)
T ss_dssp ---------------------CCBCTTTCEEECHHHHHHHHHHHHTTTEETTEE----------------CS--------
T ss_pred ---------------------CCcccCceeecCHHHHHHHHHHHHcCCccCCEE----------------eC--------
Confidence 123488999999999999999999998776652 11
Q ss_pred cchhHHHHHHHhhcCCCCCCCccccccCCCCccccccCccchhhhhccccCCCCCCCccCCCCCCCCCCcccccccCCcc
Q 002927 675 KGTKKELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPR 754 (864)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (864)
+++.+++|..++... .|.. .+|..
T Consensus 296 ---~~~~~~~~~~~~~~~----~~~~-------------~~~~~------------------------------------ 319 (392)
T 2dcf_A 296 ---SEDWVRRVLAGGSHE----AMTD-------------KGFTN------------------------------------ 319 (392)
T ss_dssp ---CHHHHHHHHHCCCTT----TCCC-------------HHHHH------------------------------------
T ss_pred ---CHHHHHHHhccCCch----hccc-------------ccccC------------------------------------
Confidence 223455453221000 0000 00000
Q ss_pred cccccccCCCCCCCCCCCCccccCccccCCCCCCccccccCCCCCcccccccCCCeEEEEEecccCCCcc-----hHHHH
Q 002927 755 IHDAFLGVGDYGDLALPNGRFGLGFKRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGAT-----TGRII 829 (864)
Q Consensus 755 ~~~~~~~~g~~~~~~~~~~~~glG~~~~~~~~~~~~~~gh~G~~G~~~~~~P~~~~~vv~~~N~~~~~~~-----~~~~~ 829 (864)
..+...||+||++.. .+...|+|.|.+|+++|++|+.+++||+++|.....+. ..++.
T Consensus 320 --------------~~~~~~YG~gw~~~~---~~~~~~~h~G~~G~~~~i~P~~~~~iv~lsn~~~~~~~~~~~~~~~~~ 382 (392)
T 2dcf_A 320 --------------TFPDGSYTRQWWCTG---NERGNVSGIGIHGQNLWLDPLTDSVIVKLSSWPDPDTEHWHRLQNGIL 382 (392)
T ss_dssp --------------HCTTCEEETTEEECC---CTTCCEEEEETTTEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHH
T ss_pred --------------CCCCCCcCcceEecC---CCCCeEEEEccCCeEEEEECCCCEEEEEeCCCCCCCCccccHHHHHHH
Confidence 012357999999864 23446999999999999999999999999999766542 34566
Q ss_pred HHHHHHh
Q 002927 830 HFVCSEL 836 (864)
Q Consensus 830 ~~~~~~l 836 (864)
+.|.++|
T Consensus 383 ~ai~~~l 389 (392)
T 2dcf_A 383 LDVSRAL 389 (392)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 6666665
|
| >4gb7_A 6-aminohexanoate-dimer hydrolase; structural genomics, IDP05595, national institute of allergy and infectious diseases; HET: MSE; 1.60A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-42 Score=389.16 Aligned_cols=298 Identities=14% Similarity=0.168 Sum_probs=221.6
Q ss_pred HHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 369 LRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 369 l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
+++++++ .... ++.|+++|++|++++++ +++++|+|.++|+||+||++++++|+|+|+|+||+||+
T Consensus 101 l~~~l~~----~~t~--a~lV~k~GkIv~E~Y~~--------~~~~dt~~~i~SvtKs~ta~~i~~lve~G~l~ldd~v~ 166 (422)
T 4gb7_A 101 LKELLDD----NKTD--AFVVVHNGQLVYERYFN--------GYNESEPHGMASLAKVFTGAIIQSLAEENRIDLEKTAD 166 (422)
T ss_dssp HHHHHHH----TTEE--EEEEEETTEEEEEEECT--------TCCTTSCEECGGGGHHHHHHHHHHHHHTTSSCTTSBHH
T ss_pred HHHHHHh----cCCC--EEEEEECCEEEEEeCCC--------CCCCCCeeeeeeccHHHHHHHHHHHHHcCCcccCcchh
Confidence 5566654 3344 46788999999998874 57899999999999999999999999999999999999
Q ss_pred hhcccCccCCCCccCHHhHhcCCCCCCCCCCCccC-----------------CCCcCCCCHHHHHHHHHccCCCCCCCCc
Q 002927 449 NIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSS-----------------ENPLLICDWDECLNRIALSAPETEPGQE 511 (864)
Q Consensus 449 ~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~-----------------~~~~~~~~~~~~~~~l~~~~~~~~pg~~ 511 (864)
+|+|+++..++++|||||||+||||++........ ..........+....+...++.++||+.
T Consensus 167 ~ylPe~~~~~~~~iTir~LL~htSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~PG~~ 246 (422)
T 4gb7_A 167 TYIKELKNTPFGKATLQQLMDMQVSVEYPTHGYEHPALENQDAQLYLASNILPRDKNYDGPMKIYDMLQEAKETAPPGSV 246 (422)
T ss_dssp HHCGGGTTSHHHHSBHHHHHTTCCEEECCCTTCCBTTBCHHHHHHHHHTTCSCCCTTCCSCSSHHHHHHTCEEEECTTSS
T ss_pred ccCccccccccccchHhhhhhcccccccccccccCccccchhhhhhhhcccccccccccchHHHHHHHhhcccccCCCce
Confidence 99999988777899999999999999643221110 0001112234566777788888999999
Q ss_pred eecccCcHHHHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCC
Q 002927 512 QLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPS 591 (864)
Q Consensus 512 ~~Ysn~~~~~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~ 591 (864)
|.|||.+|. +||.|||++||++|.+|++++||+||||+++.+.....
T Consensus 247 ~~Ys~~~~~-lLg~iie~vtG~~~~~~l~e~i~~PLgm~~~~~~~~~~-------------------------------- 293 (422)
T 4gb7_A 247 FSYNNGSTE-TLAWIIRTITGKSLAENVSERIWSQIGMEENAYYVTDE-------------------------------- 293 (422)
T ss_dssp CCCCHHHHH-HHHHHHHHHHSSCHHHHHHHHTTTTSCCSSCEEEEBCT--------------------------------
T ss_pred eecccccHH-HHHHHHHHHHCCCHHHHhHHHHhcccCCccccccccCC--------------------------------
Confidence 999999998 99999999999999999999999999999875421000
Q ss_pred CCCcchhhhhhcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 002927 592 SFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETS 671 (864)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (864)
.....++||+++|++||+||+++++++|.+.+++ +.
T Consensus 294 -----------------------~g~~~~~ggl~sta~D~arfg~l~l~~G~~~g~q----------------il----- 329 (422)
T 4gb7_A 294 -----------------------TKIEQASAGLNATARDMARFGQLLLNNGEYNGKQ----------------IL----- 329 (422)
T ss_dssp -----------------------TSCBCTTTCEEECHHHHHHHHHHHHTTTEETTEE----------------SS-----
T ss_pred -----------------------CCCcccccceecCHHHHHHHHHHHHcCCccCCeE----------------ec-----
Confidence 0122478999999999999999999999998874 11
Q ss_pred ccccchhHHHHHHHhhcCCCCCCCccccccCCCCccccccCccchhh-hhccccCCCCCCCccCCCCCCCCCCccccccc
Q 002927 672 KKQKGTKKELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYAR-LINIETSSSNTSTTDSISNTDEPQSSNVRKIF 750 (864)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (864)
+..|.+ +.+++. ..
T Consensus 330 -----------------------------------------~~~~v~~~~~~~~-------------------~~----- 344 (422)
T 4gb7_A 330 -----------------------------------------PSSITEDIKNVQE-------------------GE----- 344 (422)
T ss_dssp -----------------------------------------CTHHHHHHHTCCT-------------------TS-----
T ss_pred -----------------------------------------CHHHHHHHhccCC-------------------CC-----
Confidence 123333 111110 00
Q ss_pred CCcccccccccCCCCCCCCCCCCccccCccccCCCCCCccccccCCCCCcccccccCCCeEEEEEecccCCCcchH----
Q 002927 751 NNPRIHDAFLGVGDYGDLALPNGRFGLGFKRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTG---- 826 (864)
Q Consensus 751 ~~~~~~~~~~~~g~~~~~~~~~~~~glG~~~~~~~~~~~~~~gh~G~~G~~~~~~P~~~~~vv~~~N~~~~~~~~~---- 826 (864)
...+.| ...+||+|||+... +...|+|.|++|+++|+||+.+++||+++|...+.....
T Consensus 345 -------~~~~~~-------~~~~YG~~ww~~~~---~~~~~~~~G~~Gq~i~vdP~~~lviV~lsn~~~~~~~~~~~~~ 407 (422)
T 4gb7_A 345 -------LAIGPG-------ASISYHNQWWIPHN---EQGAFEVLGSYGQTLYIDPKAKMVIVHFSSNATPSNEIHSVYS 407 (422)
T ss_dssp -------SBSSTT-------CSCEEETTEEECCC---TTCCEEEEETTTEEEEEETTTTEEEEEEECCSSCCTTHHHHHH
T ss_pred -------cccCCC-------CCCCCCcceeecCC---CCCeEEEEccCCeEEEEEecCCEEEEEeCCCCCCCchhhHHHH
Confidence 000001 23579999998542 334699999999999999999999999999876655432
Q ss_pred HHHHHHHHHh-CCC
Q 002927 827 RIIHFVCSEL-NLP 839 (864)
Q Consensus 827 ~~~~~~~~~l-~~p 839 (864)
.+...+.++| .+|
T Consensus 408 ~~~~~Ia~~L~klP 421 (422)
T 4gb7_A 408 NMYIDIAHHLEKLP 421 (422)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhCC
Confidence 3334444555 443
|
| >3i7j_A Beta-lactamase MB2281C; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 2.20A {Mycobacterium bovis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-41 Score=359.43 Aligned_cols=258 Identities=23% Similarity=0.288 Sum_probs=201.6
Q ss_pred HhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchhhhcccC
Q 002927 375 ELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEF 454 (864)
Q Consensus 375 ~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~~ylP~~ 454 (864)
+.+++..+||++++|+++|+++++ +| +++|+|+++|+||+||++++++|+|+|+|+||+||.+
T Consensus 5 ~~~~~~~vpg~s~~vv~~~~~v~~--~g----------~~~t~~~i~S~tK~~ta~~i~~lv~~G~l~ld~~v~~----- 67 (280)
T 3i7j_A 5 EVLGGWPVPAAAAAVIGPAGVLAT--HG----------DTARVFALASVTKPLVARAAQVAVEEGVVNLDTPAGP----- 67 (280)
T ss_dssp GGGGGSSSSCEEEEEEETTEEEEE--ES----------CTTSCEECGGGHHHHHHHHHHHHHHHTSSCTTSBCSS-----
T ss_pred HHHHhCCCCcEEEEEEECCEEEEe--ec----------CCCCeEechhhHHHHHHHHHHHHHHcCCCCCCCcCCC-----
Confidence 456678999999999999997764 55 7899999999999999999999999999999999985
Q ss_pred ccCCCCccCHHhHhcCCCCCCCCCCCccCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHHHHhCCC
Q 002927 455 KSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKK 534 (864)
Q Consensus 455 ~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~lLg~iie~vtG~~ 534 (864)
++|||||||+||||++... .++.++||+.|.|||.+|. +||.|||+++|++
T Consensus 68 -----~~iTi~~LL~htsGl~~~~-----------------------~~~~~~pG~~~~Ysn~~~~-llg~iie~~tg~~ 118 (280)
T 3i7j_A 68 -----PGSTVRHLLAHTSGLAMHS-----------------------DQALARPGTRRMYSNYGFT-VLAESVQRESGIE 118 (280)
T ss_dssp -----TTCBHHHHHTTCSCBCSSS-----------------------SCBCSCTTTCCCCCHHHHH-HHHHHHHHHHTSC
T ss_pred -----CCCcHHHHHhCCCCCCCCC-----------------------CCccCCCCCceeECcHHHH-HHHHHHHHHhCCC
Confidence 6799999999999998631 2578899999999999999 9999999999999
Q ss_pred HHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhhhhhcccccccccccc
Q 002927 535 FQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNMLNI 614 (864)
Q Consensus 535 ~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (864)
|.++++++||+||||++|.|.+.
T Consensus 119 ~~~~~~~~i~~PLgm~~t~~~~~--------------------------------------------------------- 141 (280)
T 3i7j_A 119 FGRYLTEAVCEPLGMVTTRLDGG--------------------------------------------------------- 141 (280)
T ss_dssp HHHHHHHHTHHHHTCTTCEECSG---------------------------------------------------------
T ss_pred HHHHHHHHhhcccCCCCcccCCC---------------------------------------------------------
Confidence 99999999999999999865210
Q ss_pred cccccCCcceecCHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccchhHHHHHHHhhcCCCCCC
Q 002927 615 RRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTKKELLAALKNKTNNSEH 694 (864)
Q Consensus 615 ~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (864)
...+++|+++|++||+||+++++++.+++++ .+++|..++.....
T Consensus 142 --~~~~~~gl~sta~Dla~~~~~ll~~~ll~~~---------------------------------~~~~~~~~~~~~~~ 186 (280)
T 3i7j_A 142 --PAAAGFGATSTVADLAVFAGDLLRPSTVSAQ---------------------------------MHADATTVQFPGLD 186 (280)
T ss_dssp --GGGTTTCEEECHHHHHHHHHHHHSCCSSCHH---------------------------------HHHHHTSCSSTTCC
T ss_pred --CCCCCceeeECHHHHHHHHHHHhcCCCCCHH---------------------------------HHHHHhccccCCcc
Confidence 0136789999999999999999997766554 45544211111000
Q ss_pred CccccccCCCCccccccCccchhhhhccccCCCCCCCccCCCCCCCCCCcccccccCCcccccccccCCCCCCCCCCCCc
Q 002927 695 GHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGR 774 (864)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 774 (864)
+ .. .+.| ......
T Consensus 187 ~-----------------------------------------------------~~---------~~~~-----~~~~~~ 199 (280)
T 3i7j_A 187 G-----------------------------------------------------VL---------PGYG-----VQRPND 199 (280)
T ss_dssp E-----------------------------------------------------EE---------TTTE-----EESSCC
T ss_pred c-----------------------------------------------------cc---------cccc-----cCCCCc
Confidence 0 00 0000 002358
Q ss_pred cccCccccCCCC-------CCccccccCCCCCcccccccCCCeEEEEEecccCCCc---chHHHHHHHHHHhC
Q 002927 775 FGLGFKRYNTRD-------GSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGA---TTGRIIHFVCSELN 837 (864)
Q Consensus 775 ~glG~~~~~~~~-------~~~~~~gh~G~~G~~~~~~P~~~~~vv~~~N~~~~~~---~~~~~~~~~~~~l~ 837 (864)
||+||++..... .+...++|.|.+|+++|++|+.+++||+++|+..... ....+.+.|.++..
T Consensus 200 yGlGw~~~~~~~~~~~~~~~~~~~~gh~G~~g~~~~~~P~~~~~vv~ltN~~~~~~~~~~~~~l~~~v~~~~~ 272 (280)
T 3i7j_A 200 WGLGFEIRNSKSPHWTGECNSTRTFGHFGQSGGFIWVDPKADLALVVLTARDFGDWALDLWPAISDAVLAEYT 272 (280)
T ss_dssp BCSSSEECTTCSSCSSCTTSCTTCEEEEETTTEEEEEETTTTEEEEEEESSCSSTTHHHHHHHHHHHHHHHHC
T ss_pred eeeeEEeccCCCCcccccCCCCCEEEecCcCCeEEEEEeCCCEEEEEEECCCCCchhHHHHHHHHHHHHhhcC
Confidence 999999876431 2456899999999999999999999999999865442 24445555555553
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=4.1e-19 Score=195.81 Aligned_cols=144 Identities=15% Similarity=0.193 Sum_probs=98.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||.||+|+.+ +|+.||||+.+...... .+. + .+.+|+
T Consensus 30 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~--~~~---------------------------~------~~~~E~ 74 (350)
T 4b9d_A 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS--KER---------------------------E------ESRREV 74 (350)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEECTTSCH--HHH---------------------------H------HHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCH--HHH---------------------------H------HHHHHH
Confidence 67999999999999976 89999999986432110 000 0 145677
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhc-CCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~-~~~~~~l~~~~~~~~-- 165 (864)
+.+.+++|. .-|.+-.++. ....+||||||+|++|.++...... ..+...+...+.+++
T Consensus 75 ~il~~l~Hp-----------------nIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~a 137 (350)
T 4b9d_A 75 AVLANMKHP-----------------NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA 137 (350)
T ss_dssp HHHHHCCCT-----------------TBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCC-----------------CCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHH
Confidence 777776431 1233333443 5667899999999999988653332 245555555555544
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|+.||+||||||+|||++.+ |.++|+|||+++.+...
T Consensus 138 L~ylH~~~IiHRDlKp~NILl~~~--g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 138 LKHVHDRKILHRDIKSQNIFLTKD--GTVQLGDFGIARVLNST 178 (350)
T ss_dssp HHHHHHTTCEETTCCGGGEEECTT--CCEEECSTTEESCCCHH
T ss_pred HHHHHHCCeeeccCCHHHEEECCC--CCEEEcccccceeecCC
Confidence 889999999999999999999865 89999999999988764
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=5.2e-19 Score=194.67 Aligned_cols=139 Identities=20% Similarity=0.231 Sum_probs=103.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||.||+|+.+ +|+.||||+.+..-.. ..-.+.+|+
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~-------------------------------------~~~~~~~Ei 122 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-------------------------------------RRELLFNEV 122 (346)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS-------------------------------------SGGGGHHHH
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEecCchh-------------------------------------HHHHHHHHH
Confidence 45999999999999986 8999999987521100 001245577
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.|. .-|.+-.++. ....+||||||+|++|.++.. ..+++...+...+.+++ +
T Consensus 123 ~il~~l~Hp-----------------nIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~--~~~l~e~~~~~~~~qi~~aL 183 (346)
T 4fih_A 123 VIMRDYQHE-----------------NVVEMYNSYLVGDELWVVMEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQAL 183 (346)
T ss_dssp HHHHHCCCT-----------------TBCCEEEEEEETTEEEEEECCCTTEEHHHHHH--HSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCC-----------------CCCcEEEEEEECCEEEEEEeCCCCCcHHHHHH--cCCCCHHHHHHHHHHHHHHH
Confidence 666665331 1133333443 566789999999999988753 45677777777666655 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|+.||+||||||+|||++.+ |.++|+|||+++.+..
T Consensus 184 ~ylH~~~IiHRDlKp~NILl~~~--g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 184 SVLHAQGVIHRDIKSDSILLTHD--GRVKLSDFGFCAQVSK 222 (346)
T ss_dssp HHHHHTTEECCCCSGGGEEECTT--CCEEECCCTTCEECCS
T ss_pred HHHHHCCcccccCCHHHEEECCC--CCEEEecCcCceecCC
Confidence 89999999999999999999865 8999999999988754
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.5e-18 Score=195.76 Aligned_cols=139 Identities=20% Similarity=0.231 Sum_probs=104.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||.||+|+.+ +|+.||||+.+..-.. ..-.+.+|+
T Consensus 157 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~-------------------------------------~~~~~~~Ei 199 (423)
T 4fie_A 157 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-------------------------------------RRELLFNEV 199 (423)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS-------------------------------------SGGGHHHHH
T ss_pred eEeccCcCcEEEEEEECCCCCEEEEEEEeccchh-------------------------------------HHHHHHHHH
Confidence 56999999999999986 8999999987532110 001245677
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.|. .-|.+-.++. ....+||||||+|++|.++.. ..+++...+...+.+++ +
T Consensus 200 ~il~~l~Hp-----------------nIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~--~~~l~e~~~~~~~~qil~aL 260 (423)
T 4fie_A 200 VIMRDYQHE-----------------NVVEMYNSYLVGDELWVVMEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQAL 260 (423)
T ss_dssp HHHHHCCCT-----------------TBCCEEEEEEETTEEEEEEECCTTEEHHHHHH--HSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCC-----------------CCCceEEEEEECCEEEEEEeCCCCCcHHHHHh--ccCCCHHHHHHHHHHHHHHH
Confidence 666665331 1233333443 566789999999999998753 45677777777666665 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..||+||||||+|||++.+ |.++|+|||+++.+..
T Consensus 261 ~ylH~~~IiHRDiKp~NILl~~~--g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 261 SVLHAQGVIHRDIKSDSILLTHD--GRVKLSDFGFCAQVSK 299 (423)
T ss_dssp HHHHHTTEECCCCSTTTEEECTT--CCEEECCCTTCEECCS
T ss_pred HHHHHCCeecccCCHHHEEEcCC--CCEEEecCccceECCC
Confidence 89999999999999999999865 8999999999988754
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=99.74 E-value=1e-18 Score=189.47 Aligned_cols=144 Identities=17% Similarity=0.133 Sum_probs=102.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||+||+|+.+ +|+.||||+...... ..+ - ..-.+.+|+
T Consensus 38 ~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~---~~~-----------------~--------------~~~~~~~E~ 83 (311)
T 4aw0_A 38 KILGEGSFSTVVLARELATSREYAIKILEKRHI---IKE-----------------N--------------KVPYVTRER 83 (311)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH---HHT-----------------T--------------CHHHHHHHH
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEEEHHHC---CCH-----------------H--------------HHHHHHHHH
Confidence 67999999999999976 899999999753110 000 0 001144566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.|. .-+.+-.++. ....+|||||++|++|.++.. ....++...+...+.+++ +
T Consensus 84 ~il~~l~Hp-----------------nIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~-~~~~l~e~~~~~~~~qi~~al 145 (311)
T 4aw0_A 84 DVMSRLDHP-----------------FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSAL 145 (311)
T ss_dssp HHHTTCCCT-----------------TBCCEEEEEECSSEEEEEECCCTTEEHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCC-----------------CCCeEEEEEEeCCEEEEEEecCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHH
Confidence 665554321 1122333343 456789999999999998764 234566666666555554 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
..+|+.||+|||+||+|||++.+ |.++|+|||+++.+...
T Consensus 146 ~ylH~~~IiHRDlKPeNILl~~~--g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 146 EYLHGKGIIHRDLKPENILLNED--MHIQITDFGTAKVLSPE 185 (311)
T ss_dssp HHHHHTTEECSCCSGGGEEECTT--SCEEECCCTTCEECCTT
T ss_pred HHHHHCCCccCCCCHHHeEEcCC--CCEEEEEcCCceecCCC
Confidence 89999999999999999999865 89999999999987643
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-18 Score=189.73 Aligned_cols=135 Identities=20% Similarity=0.207 Sum_probs=97.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||.||+|+.+ +|+.||||+.+.... ..+|+
T Consensus 64 ~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------------------------------------------~~~E~ 101 (336)
T 4g3f_A 64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------------------------------------------RVEEL 101 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------------------------------------------CTHHH
T ss_pred cEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------------------------------------------HHHHH
Confidence 46999999999999976 799999998764211 11244
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.+++ +++ |.+-.++. ....+||||||+|++|.++... ...++...+...+.+++
T Consensus 102 ~il~~l~------------------HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~a 162 (336)
T 4g3f_A 102 VACAGLS------------------SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQ-MGCLPEDRALYYLGQALEG 162 (336)
T ss_dssp HTTTTCC------------------CTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHH
T ss_pred HHHHhCC------------------CCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHH
Confidence 4433332 222 22223333 4557899999999999998652 34567777666666655
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCC-ceEEEecccccccChH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPH-RPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g-~i~LiDFG~~~~l~~~ 208 (864)
+..+|..||+|||+||+|||++.+ | +++|+|||+++.+.+.
T Consensus 163 L~ylH~~~IiHRDlKp~NILl~~~--g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 163 LEYLHTRRILHGDVKADNVLLSSD--GSRAALCDFGHALCLQPD 204 (336)
T ss_dssp HHHHHTTTEECSCCCGGGEEECTT--SCCEEECCCTTCEEC---
T ss_pred HHHHHHCCceecccCHHHEEEeCC--CCEEEEeeCCCCeEccCC
Confidence 889999999999999999999865 5 6999999999987653
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=99.73 E-value=5.5e-18 Score=181.05 Aligned_cols=142 Identities=18% Similarity=0.254 Sum_probs=93.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+......- + .+-.+.+|+
T Consensus 19 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~--~--------------------------------~~~~~~~Ei 64 (275)
T 3hyh_A 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKS--D--------------------------------MQGRIEREI 64 (275)
T ss_dssp EEEEC---CCEEEEECTTTCCEEEEEEEECC----------------------------------------CHHHHHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCH--H--------------------------------HHHHHHHHH
Confidence 67999999999999975 899999999865432110 0 011245677
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+++++|. .-+.+-.++. ....+|||||++ ++|.+... ....++...+...+.+++ +
T Consensus 65 ~il~~l~Hp-----------------nIv~~~~~~~~~~~~~ivmEy~~-g~L~~~l~-~~~~l~e~~~~~~~~qi~~al 125 (275)
T 3hyh_A 65 SYLRLLRHP-----------------HIIKLYDVIKSKDEIIMVIEYAG-NELFDYIV-QRDKMSEQEARRFFQQIISAV 125 (275)
T ss_dssp HHHHHCCCT-----------------TBCCEEEEEECSSEEEEEEECCC-EEHHHHHH-HSCSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCC-----------------CCCeEEEEEEECCEEEEEEeCCC-CCHHHHHH-HcCCCCHHHHHHHHHHHHHHH
Confidence 776665331 1123333443 556789999995 46666543 334567666666665555 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|+.||+|||+||+|||++.+ |+++|+|||+++..++
T Consensus 126 ~ylH~~~IiHRDiKP~NILl~~~--~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 126 EYCHRHKIVHRDLKPENLLLDEH--LNVKIADFGLSNIMTD 164 (275)
T ss_dssp HHHHHTTCCCCCCCTTTEEECTT--CCEEECCSSCC-----
T ss_pred HHHHHCCcccccCChHHeEECCC--CCEEEeecCCCeecCC
Confidence 89999999999999999999865 8999999999987654
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.71 E-value=8.9e-18 Score=182.28 Aligned_cols=138 Identities=16% Similarity=0.200 Sum_probs=99.3
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|+||.||+|+++ ..||||+.+...... .+ .-.|.+|++
T Consensus 42 ~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~--~~---------------------------------~~~f~~E~~ 84 (307)
T 3omv_A 42 TRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTP--EQ---------------------------------FQAFRNEVA 84 (307)
T ss_dssp EECCCCSSSEEEEEESS--SEEEEEECCCSSCCH--HH---------------------------------HHHHHHHHH
T ss_pred eEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCH--HH---------------------------------HHHHHHHHH
Confidence 67999999999999975 369999976422110 00 012566777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
.+.+++| +++. +++. ....+|||||++|++|.+++......++...+...+.++.
T Consensus 85 il~~l~H------------------pNIV--~l~g~~~~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~g 144 (307)
T 3omv_A 85 VLRKTRH------------------VNIL--LFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQG 144 (307)
T ss_dssp HHTTCCC------------------TTBC--CEEEEECSSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHH
T ss_pred HHHhCCC------------------CCEe--eEEEEEECCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHH
Confidence 7766543 2221 2332 4567899999999999987654444567777666666655
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|+.||+|||+||.|||++.+ +.++|+|||+++.++.
T Consensus 145 L~yLH~~~IiHRDlKp~NILl~~~--~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 145 MDYLHAKNIIHRDMKSNNIFLHEG--LTVKIGDFGLATVKSR 184 (307)
T ss_dssp HHHHHHTTCBCSCCCSSSEEEETT--EEEEECCCSSCBC---
T ss_pred HHHHHHCCccCCccCHHHEEECCC--CcEEEeeccCceeccc
Confidence 889999999999999999999865 8999999999987654
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=5.6e-17 Score=172.18 Aligned_cols=185 Identities=16% Similarity=0.249 Sum_probs=121.5
Q ss_pred cccccccceeeEEEEe-cCCCE--EEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 11 TPLATASIAQVHRATL-VDGRQ--VVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 11 ~plasaSigqV~~A~l-~~G~~--VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
++||+|++|+||+|+. .+|+. ||||+.++.....-. . ...+. ..+.+.. +. ....-..+..+.+
T Consensus 53 ~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~--~------~~~~~-~~~~~~~--~~--~~~~~~~~~~~~~ 119 (258)
T 1zth_A 53 GVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDK--M------DEYLY-GDERFDM--RR--ISPKEKVFIWTEK 119 (258)
T ss_dssp EEEEECSSEEEEEEEEEETTEEEEEEEEEECCC---------------GGGTT-TCTTSCC--------CHHHHHHHHHH
T ss_pred CEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhh--H------HHhhc-ccchhhh--hc--cChHHHHHHHHHH
Confidence 6899999999999998 58999 999998876422100 0 00000 0011100 00 0000112335778
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecC--CcCCCChHHHhhc--CCCHHHHHHHHHH
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMD--GIRLNDCESLEAF--GVNKQKVVEEITR 163 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~--G~~L~~~~~~~~~--~~~~~~l~~~~~~ 163 (864)
|++++.++.+. .+.+|.++.....+|||||+. |.....+...... ......++..++.
T Consensus 120 E~~~l~~l~~~------------------~i~~p~~~~~~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~ 181 (258)
T 1zth_A 120 EFRNLERAKEA------------------GVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVE 181 (258)
T ss_dssp HHHHHHHHHHT------------------TCCCCCEEEEETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHhC------------------CCCCCeEEEcCCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHH
Confidence 99999998762 356788877778899999994 3222333222111 2244556666655
Q ss_pred HHHHHHH-hcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHHHcCCC
Q 002927 164 AYAHQIY-VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 238 (864)
Q Consensus 164 ~~l~~i~-~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~G~~ 238 (864)
. +..+| ..|++|||+||+|||++. +++|+|||++..++...... ++.+|.+.+.+.+..+|+.
T Consensus 182 ~-l~~lH~~~givHrDlkp~NILl~~----~~~liDFG~a~~~~~~~~~~-------~l~rd~~~~~~~f~~~g~~ 245 (258)
T 1zth_A 182 N-VKRLYQEAELVHADLSEYNIMYID----KVYFIDMGQAVTLRHPMAES-------YLERDVRNIIRFFSKYGVK 245 (258)
T ss_dssp H-HHHHHHTSCEECSSCSTTSEEESS----SEEECCCTTCEETTSTTHHH-------HHHHHHHHHHHHHHTTTCC
T ss_pred H-HHHHHHHCCEEeCCCCHHHEEEcC----cEEEEECcccccCCCccHHH-------HHHHHHHHHHHHHHHcCCC
Confidence 4 66789 999999999999999973 79999999999887654333 3578889999999999985
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=99.71 E-value=9.7e-18 Score=187.21 Aligned_cols=149 Identities=18% Similarity=0.223 Sum_probs=105.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++||+|++|+||+|+++ +|+.||||+++++.......++ .++.+. +.+|.
T Consensus 100 ~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~-----------------------~~~~~~------~~~E~ 150 (365)
T 2y7j_A 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQL-----------------------EEVREA------TRRET 150 (365)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHH-----------------------HHHHHH------HHHHH
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHH-----------------------HHHHHH------HHHHH
Confidence 79999999999999986 8999999999887643222222 122222 33344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+.++.. ++.+..+..+. ++..+|||||++|.+|.++.. ....+....+...+.+++
T Consensus 151 ~~l~~l~~-----------------hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~-~~~~l~~~~~~~i~~qi~~~ 212 (365)
T 2y7j_A 151 HILRQVAG-----------------HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLT-EKVALSEKETRSIMRSLLEA 212 (365)
T ss_dssp HHHHHHTT-----------------CTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcC-----------------CCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHH
Confidence 44444421 22333332222 667899999999999988764 233466655555555544
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+||||+||+++.+ |+++|+|||+++.++..
T Consensus 213 L~~LH~~gi~H~Dlkp~NIl~~~~--~~ikl~DfG~~~~~~~~ 253 (365)
T 2y7j_A 213 VSFLHANNIVHRDLKPENILLDDN--MQIRLSDFGFSCHLEPG 253 (365)
T ss_dssp HHHHHHTTEECSCCSGGGEEECTT--CCEEECCCTTCEECCTT
T ss_pred HHHHHhCCeecCCCCHHHEEECCC--CCEEEEecCcccccCCC
Confidence 788999999999999999999865 89999999999887653
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.1e-17 Score=180.13 Aligned_cols=144 Identities=15% Similarity=0.071 Sum_probs=99.5
Q ss_pred cccccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 7 DFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 7 ~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
.|+ +-||+|+||.||+|+.+ +|+.||||+........ .+ . -.|
T Consensus 29 ~~~-~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~--~~---------------------------~------~~~ 72 (290)
T 3fpq_A 29 KFD-IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK--SE---------------------------R------QRF 72 (290)
T ss_dssp EEE-EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH--HH---------------------------H------HHH
T ss_pred Eee-eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCH--HH---------------------------H------HHH
Confidence 444 35999999999999976 79999999875322110 00 0 025
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEec-----CCceEEEeecCCcCCCChHHHhhcCCCHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQS-----SETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 159 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~~-----~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~ 159 (864)
.+|++.+.+++| ++ |.+-.++.+ ...+|||||++|++|.++.. ....++...+..
T Consensus 73 ~~E~~il~~l~H------------------pnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~-~~~~l~~~~~~~ 133 (290)
T 3fpq_A 73 KEEAEMLKGLQH------------------PNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK-RFKVMKIKVLRS 133 (290)
T ss_dssp HHHHHHHHTCCC------------------TTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHH
T ss_pred HHHHHHHHhCCC------------------CCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHH-hcCCCCHHHHHH
Confidence 567777766543 22 222222221 22589999999999998864 234456666555
Q ss_pred HHHHHH--HHHHHhcC--eeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 160 EITRAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 160 ~~~~~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+.+++ +..+|..| |+|||+||+|||++.. +|.++|+|||+++...
T Consensus 134 ~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~-~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 134 WCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGP-TGSVKIGDLGLATLKR 183 (290)
T ss_dssp HHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESST-TSCEEECCTTGGGGCC
T ss_pred HHHHHHHHHHHHHHCCCCEEecccChhheeEECC-CCCEEEEeCcCCEeCC
Confidence 555544 88899999 9999999999999742 4899999999987543
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.5e-17 Score=180.23 Aligned_cols=140 Identities=19% Similarity=0.211 Sum_probs=98.4
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||+|+||+||+|+++ +|+.||||+.+..-.+. +-+
T Consensus 19 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~-------------------------------------~~~ 61 (299)
T 4asz_A 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNA-------------------------------------RKD 61 (299)
T ss_dssp EEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHH-------------------------------------HHH
T ss_pred eEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHH-------------------------------------HHH
Confidence 67999999999999864 47889999987543211 012
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhh------------c
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA------------F 150 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~------------~ 150 (864)
|.+|++.+.+++| ++ |.+-.+.. ....+|||||++|++|.+++.... .
T Consensus 62 f~~E~~il~~l~H------------------pnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~ 123 (299)
T 4asz_A 62 FHREAELLTNLQH------------------EHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPT 123 (299)
T ss_dssp HHHHHHHHTTCCC------------------TTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCC
T ss_pred HHHHHHHHHhCCC------------------CCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCC
Confidence 5667777766543 22 22222222 456789999999999998864321 2
Q ss_pred CCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 151 GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 151 ~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.++...+...+.++. +..+|+.||+|||+||.|||++.+ +.++|+|||+++.+..
T Consensus 124 ~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~--~~~Ki~DFGla~~~~~ 180 (299)
T 4asz_A 124 ELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN--LLVKIGDFGMSRDVYS 180 (299)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG--GCEEECCCSCHHHHTG
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCC--CcEEECCcccceecCC
Confidence 355566666555554 888999999999999999999865 8999999999976544
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=2.2e-17 Score=179.08 Aligned_cols=143 Identities=13% Similarity=0.099 Sum_probs=89.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||+||+|+.+ +|+.||||+.+..-.+.. .+ .+.+|+
T Consensus 11 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~------------------------------~~------~~~~E~ 54 (299)
T 4g31_A 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELA------------------------------RE------KVMREV 54 (299)
T ss_dssp EEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHH------------------------------HH------HHHHHH
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHH------------------------------HH------HHHHHH
Confidence 67999999999999976 899999998753211110 00 144566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cC------------CceEEEeecCCcCCCChHHHhh--cCCC
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SS------------ETVLILEFMDGIRLNDCESLEA--FGVN 153 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~------------~~vLvmE~i~G~~L~~~~~~~~--~~~~ 153 (864)
+.+.+++| ++ |.+-.++. .. ..+|||||++|.+|.++..... ...+
T Consensus 55 ~il~~l~H------------------pnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~ 116 (299)
T 4g31_A 55 KALAKLEH------------------PGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERE 116 (299)
T ss_dssp HHHTTCCC------------------TTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSC
T ss_pred HHHHhCCC------------------CCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhH
Confidence 66655432 22 12222221 11 1479999999999988754211 1122
Q ss_pred HHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 154 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 154 ~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
...+...+.+++ +..+|+.||+|||+||+|||++.+ |.++|+|||+++.++...
T Consensus 117 ~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~--~~vKl~DFGla~~~~~~~ 172 (299)
T 4g31_A 117 RSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMD--DVVKVGDFGLVTAMDQDE 172 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT--CCEEECCCCCC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCC--CcEEEccCccceecCCCc
Confidence 233333333433 889999999999999999999865 899999999999886543
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.69 E-value=6.8e-17 Score=179.36 Aligned_cols=182 Identities=13% Similarity=0.184 Sum_probs=124.4
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHH--HHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTI--ILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~--~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+||+|++|.||+|+..+|++|||||.+++.... +..+- .............. ..+.-..|
T Consensus 101 ~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r-----------~~~~~~~~~~~~~~------~rl~A~kE 163 (397)
T 4gyi_A 101 SRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANR-----------DYLRNRSTGSWMYL------SRLAAIKE 163 (397)
T ss_dssp EEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--C-----------EECTTSCHHHHHHH------HHHHHHHH
T ss_pred CEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHH-----------HHHHhhccccHHHH------HHHHHHHH
Confidence 6899999999999998899999999988764310 00000 00000111111111 11223468
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQ 168 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~ 168 (864)
.+|+.++.+. .+.+|+++...+.+||||||+|.++.++.. ..+...+...++.. +..
T Consensus 164 ~~nL~rL~~~------------------gv~vp~p~~~~~~~LVME~i~G~~L~~l~~----~~~~~~l~~qll~~-l~~ 220 (397)
T 4gyi_A 164 FAFMKALYEE------------------GFPVPEPIAQSRHTIVMSLVDALPMRQVSS----VPDPASLYADLIAL-ILR 220 (397)
T ss_dssp HHHHHHHHHT------------------TCSCCCEEEEETTEEEEECCSCEEGGGCCC----CSCHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHhc------------------CCCCCeeeeccCceEEEEecCCccHhhhcc----cHHHHHHHHHHHHH-HHH
Confidence 8999998763 466888888778899999999999876532 12456666666654 667
Q ss_pred HHhcCeeccCCCCCCeEEccCCCC--------ceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHHH-HcCCCc
Q 002927 169 IYVDGFFNGDPHPGNFLVSKDPPH--------RPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFA-EMGLRL 239 (864)
Q Consensus 169 i~~~G~~H~D~hPgNIlv~~~~~g--------~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~-~~G~~~ 239 (864)
+|+.|+|||||||.|||+++++++ .++||||+.+...+...-.. ++.+|...+.+.|. ..++..
T Consensus 221 lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~hp~a~~-------~l~RDv~ni~~fF~kk~~~~~ 293 (397)
T 4gyi_A 221 LAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMDHPNAEM-------YFDRDVQCIKRFFERRFHFVS 293 (397)
T ss_dssp HHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEETTSTTHHH-------HHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccCCCCChHH-------HHHHHHHHHHHHHHhccCCcc
Confidence 899999999999999999875321 38999999888766443322 35678888888885 456653
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2e-17 Score=179.95 Aligned_cols=139 Identities=14% Similarity=0.172 Sum_probs=99.9
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||+|+||.||+|++. +++.||||+.+....... .-+
T Consensus 32 ~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~------------------------------------~~~ 75 (308)
T 4gt4_A 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPL------------------------------------REE 75 (308)
T ss_dssp EEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-C------------------------------------HHH
T ss_pred eEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHH------------------------------------HHH
Confidence 46999999999999963 578999999765432110 012
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHh------------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE------------ 148 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~------------ 148 (864)
|.+|++.+.+++| ++| -+++. ....+|||||++|++|.+++...
T Consensus 76 f~~E~~il~~l~H------------------pNI--V~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~ 135 (308)
T 4gt4_A 76 FRHEAMLRARLQH------------------PNV--VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDD 135 (308)
T ss_dssp HHHHHHHHHHCCC------------------TTB--CCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----
T ss_pred HHHHHHHHHhCCC------------------CCC--CCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccc
Confidence 6678877777643 222 23332 45678999999999999886422
Q ss_pred ---hcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 149 ---AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 149 ---~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
...++...+...+.++. +..+|+.|++||||||.|||++.+ +.++|.|||+++.+..
T Consensus 136 ~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~--~~~Ki~DFGlar~~~~ 197 (308)
T 4gt4_A 136 RTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDK--LNVKISDLGLFREVYA 197 (308)
T ss_dssp CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG--GCEEECCSCCBCGGGG
T ss_pred cccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCC--CCEEECCcccceeccC
Confidence 12355556666555554 889999999999999999999865 8999999999987654
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=4.9e-18 Score=183.94 Aligned_cols=141 Identities=19% Similarity=0.199 Sum_probs=94.7
Q ss_pred cccccccceeeEEEEec----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|+||+||+|+.. +|+.||||+.+...... .....+.
T Consensus 30 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~-----------------------------------~~~~~~~ 74 (304)
T 3ubd_A 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV-----------------------------------RDRVRTK 74 (304)
T ss_dssp EEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE-----------------------------------EECC---
T ss_pred EEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh-----------------------------------HHHHHHH
Confidence 67999999999999863 57899999976432100 0011233
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
+|++.+.++ +++++ .+-.++. ....+||||||+|++|.++.. ....++...+...+.++
T Consensus 75 ~E~~il~~l------------------~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~-~~~~l~e~~~~~~~~qi 135 (304)
T 3ubd_A 75 MERDILVEV------------------NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLS-KEVMFTEEDVKFYLAEL 135 (304)
T ss_dssp ---CCCCCC------------------CCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHH-HHCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHC------------------CCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHH-hcCCCCHHHHHHHHHHH
Confidence 444333322 12322 2223333 566789999999999998764 23456666666665555
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+|+.||+|||+||+|||++.+ |.++|+|||+++.+.+
T Consensus 136 ~~aL~ylH~~~IiHRDlKp~NILl~~~--g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 136 ALALDHLHSLGIIYRDLKPENILLDEE--GHIKLTDFGLSKESID 178 (304)
T ss_dssp HHHHHHHHHTTCCCSSCCGGGEEECTT--SCEEEESSEEEEC---
T ss_pred HHHHHHHHHCCCcCCCCCHHHeEEcCC--CCEEecccccceeccC
Confidence 4 889999999999999999999865 8999999999986543
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=3.2e-17 Score=179.99 Aligned_cols=139 Identities=19% Similarity=0.193 Sum_probs=94.7
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||+|+||+||+|+++ +|+.||||+.+..-... .-+
T Consensus 47 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~-------------------------------------~~~ 89 (329)
T 4aoj_A 47 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA-------------------------------------RQD 89 (329)
T ss_dssp EEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHH-------------------------------------HHH
T ss_pred EEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHH-------------------------------------HHH
Confidence 56999999999999864 47899999987543211 012
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHh------------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE------------ 148 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~------------ 148 (864)
|.+|++.+.+++| ++ |-+++. ....+|||||++|++|.++....
T Consensus 90 f~~E~~il~~l~H------------------pn--IV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~ 149 (329)
T 4aoj_A 90 FQREAELLTMLQH------------------QH--IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGED 149 (329)
T ss_dssp HHHHHHHHTTCCC------------------TT--BCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC---------
T ss_pred HHHHHHHHHhCCC------------------CC--CCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCccccccccccc
Confidence 6668777766543 22 223332 45678999999999998875321
Q ss_pred --hcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 149 --AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 149 --~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
...++..++...+.++. +..+|..||+|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 150 ~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~--~~~Ki~DFGla~~~~~~ 211 (329)
T 4aoj_A 150 VAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQG--LVVKIGDFGMSRDIYST 211 (329)
T ss_dssp --CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETT--TEEEECCCC--------
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCC--CcEEEcccccceeccCC
Confidence 12345555556555554 888999999999999999999865 89999999999876543
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=3.3e-17 Score=178.10 Aligned_cols=76 Identities=17% Similarity=0.236 Sum_probs=61.8
Q ss_pred CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhc--------CeeccCCCCCCeEEccCCCCceEEE
Q 002927 128 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVD--------GFFNGDPHPGNFLVSKDPPHRPILL 197 (864)
Q Consensus 128 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~--------G~~H~D~hPgNIlv~~~~~g~i~Li 197 (864)
..+|||||++|++|.++.. ..+.+.....+...++. +..+|.. ||+|||+||+|||++.+ +.++|+
T Consensus 75 ~~~lV~Ey~~~gsL~~~l~--~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~--~~~Ki~ 150 (303)
T 3hmm_A 75 QLWLVSDYHEHGSLFDYLN--RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN--GTCCIA 150 (303)
T ss_dssp EEEEEEECCTTCBHHHHHH--HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTT--SCEEEC
T ss_pred EEEEEecCCCCCcHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCC--CCEEEE
Confidence 3589999999999998854 45667666666666555 7788876 99999999999999865 899999
Q ss_pred ecccccccCh
Q 002927 198 DFGLTKKLSS 207 (864)
Q Consensus 198 DFG~~~~l~~ 207 (864)
|||+++....
T Consensus 151 DFGla~~~~~ 160 (303)
T 3hmm_A 151 DLGLAVRHDS 160 (303)
T ss_dssp CCTTCEEEET
T ss_pred eCCCCccccC
Confidence 9999987654
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=8.6e-16 Score=165.20 Aligned_cols=173 Identities=17% Similarity=0.204 Sum_probs=116.8
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|+||+|+..+|+.||||+.+++....- +....+ + .+...+. ......+.+|++
T Consensus 96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~--~~~~~~-------------~--~~~~~w~--~~~~~~~~~E~~ 156 (282)
T 1zar_A 96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFK--KVKEKR-------------D--YGDLHFS--VLAIRSARNEFR 156 (282)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC--------CCCC----------------------CHH--HHHHHHHHHHHH
T ss_pred CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchh--hhhhhh-------------h--hcchhhH--HHHHHHHHHHHH
Confidence 68999999999999997899999999886532110 000000 0 0000000 011224667777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 170 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~i~ 170 (864)
.+.+++ + +.+|.++..+..+|||||++|.+|.++ . ......++..++.. +..+|
T Consensus 157 ~l~~l~-~-------------------~~v~~~~~~~~~~lvmE~~~g~~L~~l-~----~~~~~~i~~qi~~~-l~~lH 210 (282)
T 1zar_A 157 ALQKLQ-G-------------------LAVPKVYAWEGNAVLMELIDAKELYRV-R----VENPDEVLDMILEE-VAKFY 210 (282)
T ss_dssp HHHHTT-T-------------------SSSCCEEEEETTEEEEECCCCEEGGGC-C----CSCHHHHHHHHHHH-HHHHH
T ss_pred HHHhcc-C-------------------CCcCeEEeccceEEEEEecCCCcHHHc-c----hhhHHHHHHHHHHH-HHHHH
Confidence 777764 2 345555556677999999999999873 1 12345566666655 67889
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHHHHHHHHHHHHHhCCHHHHHHHH-HHcCCC
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAF-AEMGLR 238 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~-~~~G~~ 238 (864)
+.|++|||+||+|||++ + |+++|+|||++...+......+ ..+|.+.+.+.+ ...|+.
T Consensus 211 ~~giiHrDlkp~NILl~-~--~~vkl~DFG~a~~~~~~~a~e~-------l~rdv~~i~~~f~~~~~~~ 269 (282)
T 1zar_A 211 HRGIVHGDLSQYNVLVS-E--EGIWIIDFPQSVEVGEEGWREI-------LERDVRNIITYFSRTYRTE 269 (282)
T ss_dssp HTTEECSCCSTTSEEEE-T--TEEEECCCTTCEETTSTTHHHH-------HHHHHHHHHHHHHHHHCCC
T ss_pred HCCCEeCCCCHHHEEEE-C--CcEEEEECCCCeECCCCCHHHH-------HHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999 5 8999999999998876544433 457777788887 666764
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=2.9e-16 Score=173.96 Aligned_cols=142 Identities=18% Similarity=0.164 Sum_probs=100.1
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||+|+||.||+|+.. +++.||||+.+.+..... .-+
T Consensus 70 ~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~------------------------------------~~~ 113 (353)
T 4ase_A 70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE------------------------------------HRA 113 (353)
T ss_dssp EEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHH------------------------------------HHH
T ss_pred eEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHH------------------------------------HHH
Confidence 67999999999999964 246899999876543211 012
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe--cCCceEEEeecCCcCCCChHHHhh------------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ--SSETVLILEFMDGIRLNDCESLEA------------ 149 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~------------ 149 (864)
|.+|++.+.++.+ +++ |.+-.+.. ....+||||||+|++|.+++....
T Consensus 114 ~~~E~~il~~l~h-----------------hpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~ 176 (353)
T 4ase_A 114 LMSELKILIHIGH-----------------HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 176 (353)
T ss_dssp HHHHHHHHHHHCC-----------------CTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC------
T ss_pred HHHHHHHHHHcCC-----------------CCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchh
Confidence 5667777777643 111 22222221 234689999999999999865321
Q ss_pred ---cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 150 ---FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 150 ---~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..++...+...+.++. +..+|..+|+||||||.|||++.+ +.++|+|||+++.+..
T Consensus 177 ~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~--~~vKi~DFGlar~~~~ 237 (353)
T 4ase_A 177 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLARDIYK 237 (353)
T ss_dssp -CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG--GCEEECCCGGGSCTTT
T ss_pred hccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCC--CCEEECcchhhhhccc
Confidence 1244555555554544 888999999999999999999865 8999999999987643
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=3.2e-16 Score=174.47 Aligned_cols=136 Identities=16% Similarity=0.247 Sum_probs=94.8
Q ss_pred cccccccceeeEEEEec----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|+||+||+|+.+ +++.||||+..+.-.. ..+.
T Consensus 27 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~---------------------------------------~~~~ 67 (361)
T 4f9c_A 27 DKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHP---------------------------------------IRIA 67 (361)
T ss_dssp EEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCH---------------------------------------HHHH
T ss_pred EEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCH---------------------------------------HHHH
Confidence 67999999999999853 4789999987653211 0122
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
+|.+.+.++. +++. +.+-.++. ....+|||||++|.+|.++.. .++...+...+.++
T Consensus 68 ~E~~~l~~~~-----------------~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~ql 126 (361)
T 4f9c_A 68 AELQCLTVAG-----------------GQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN----SLSFQEVREYMLNL 126 (361)
T ss_dssp HHHHHHHHTC-----------------SBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHH
T ss_pred HHHHHHHHhc-----------------CCCCCceEEEEEEECCEEEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHH
Confidence 3444443331 1122 22233343 566789999999999877642 35655555555554
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+|+.||+|||+||+|||++.+ .+.++|+|||+++.+.+
T Consensus 127 l~al~ylH~~gIiHRDiKPeNiLl~~~-~~~~kl~DFGla~~~~~ 170 (361)
T 4f9c_A 127 FKALKRIHQFGIVHRDVKPSNFLYNRR-LKKYALVDFGLAQGTHD 170 (361)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEEETT-TTEEEECCCTTCEECTT
T ss_pred HHHHHHHHHCCeEeCcCCHHHeEEeCC-CCeEEECcCCCCcccCC
Confidence 4 889999999999999999999854 47899999999986654
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.62 E-value=4.4e-16 Score=175.40 Aligned_cols=141 Identities=16% Similarity=0.236 Sum_probs=95.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||+||+|+.+ +|+.||||+.+...... .+ .+ .+.+|+
T Consensus 60 ~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~--~~---------------------------~~------~~~~Ei 104 (398)
T 4b99_A 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVV--TN---------------------------AK------RTLREL 104 (398)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSH--HH---------------------------HH------HHHHHH
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEECccccch--HH---------------------------HH------HHHHHH
Confidence 67999999999999976 89999999875432110 00 00 134566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
+.+.+++|.. -|.+-.++. ....+|||||++| .|.++.. ....+....+...+.
T Consensus 105 ~il~~l~Hpn-----------------Iv~l~~~~~~~~~~~~~~~~~ivmE~~~g-~L~~~i~-~~~~l~~~~~~~~~~ 165 (398)
T 4b99_A 105 KILKHFKHDN-----------------IIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIH-SSQPLTLEHVRYFLY 165 (398)
T ss_dssp HHHHHCCCTT-----------------BCCEEEECCCSSCTTTCCCEEEEEECCSE-EHHHHHT-SSSCCCHHHHHHHHH
T ss_pred HHHHhcCCCC-----------------cceEeeeeecccccccCCEEEEEEeCCCC-CHHHHHH-hcCCCCHHHHHHHHH
Confidence 6666653311 122223321 1345899999986 4555432 233466666655555
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+++ +..+|+.||+||||||+|||++.+ |.++|+|||+++.+..
T Consensus 166 qil~al~ylH~~~iiHRDlKP~NIl~~~~--~~~Ki~DFGla~~~~~ 210 (398)
T 4b99_A 166 QLLRGLKYMHSAQVIHRDLKPSNLLVNEN--CELKIGDFGMARGLCT 210 (398)
T ss_dssp HHHHHHHHHHHTTCBCCCCCGGGEEECTT--CCEEECCCTTCBCC--
T ss_pred HHHHHHHHHHHCcCcCCCcCccccccCCC--CCEEEeecceeeeccc
Confidence 554 888999999999999999999865 8999999999987754
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=99.62 E-value=3.7e-16 Score=184.32 Aligned_cols=146 Identities=15% Similarity=0.079 Sum_probs=98.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|+||.||+|+.+ +|+.||||+.+...- ... + .+-....|.
T Consensus 195 k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i---~~~------------------~-------------~~~~~~~E~ 240 (689)
T 3v5w_A 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRI---KMK------------------Q-------------GETLALNER 240 (689)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH---HHT------------------T-------------CHHHHHHHH
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEEeHHHc---chh------------------h-------------hHHHHHHHH
Confidence 78999999999999986 899999999753110 000 0 000011122
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
.-+..++. . +++. |.+-..+. ....+|||||++|++|.+++. ....++...+...+.+++
T Consensus 241 ~~l~ll~~-~--------------~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~-~~~~l~E~~a~~y~~qIl~a 304 (689)
T 3v5w_A 241 IMLSLVST-G--------------DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS-QHGVFSEADMRFYAAEIILG 304 (689)
T ss_dssp HHHHHHSS-S--------------CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HHCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhh-C--------------CCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHH
Confidence 12222211 0 1222 22223333 456789999999999988764 234466666655555554
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..||+||||||+|||++.+ |.++|+|||+++.++..
T Consensus 305 L~yLH~~gIiHRDLKPeNILld~~--G~vKL~DFGlA~~~~~~ 345 (689)
T 3v5w_A 305 LEHMHNRFVVYRDLKPANILLDEH--GHVRISDLGLACDFSKK 345 (689)
T ss_dssp HHHHHTTTEECCCCSGGGEEECTT--SCEEECCCTTCEECSSC
T ss_pred HHHHHHCCccccCCchHHeEEeCC--CCEEecccceeeecCCC
Confidence 889999999999999999999865 89999999999887643
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=99.61 E-value=7.9e-16 Score=181.55 Aligned_cols=144 Identities=22% Similarity=0.301 Sum_probs=102.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|+||.||+|+.+ +|+.||||+.+..-... . + .+.+|+
T Consensus 163 ~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~----~---------------------------~------~~~~Ei 205 (573)
T 3uto_A 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD----K---------------------------E------TVRKEI 205 (573)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHH----H---------------------------H------HHHHHH
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEeccchhh----H---------------------------H------HHHHHH
Confidence 67999999999999986 89999999875432110 0 0 133466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+..++|. .-+.+-.++. ....+|||||++|++|.+........++...+...+.+++ +
T Consensus 206 ~il~~l~hp-----------------nIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al 268 (573)
T 3uto_A 206 QTMSVLRHP-----------------TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGL 268 (573)
T ss_dssp HHHHHTCCT-----------------TBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCC-----------------CCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 655554321 1233334444 5667899999999998776532333455555555555544 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
..+|+.||+|||+||.|||++.+..+.++|+|||+++.+++.
T Consensus 269 ~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~ 310 (573)
T 3uto_A 269 CHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 310 (573)
T ss_dssp HHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred HHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCC
Confidence 889999999999999999998654589999999999987653
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=6.1e-16 Score=182.47 Aligned_cols=147 Identities=19% Similarity=0.244 Sum_probs=96.0
Q ss_pred ccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 12 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 12 plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
-..+++.|+++.++.. .|+.|+||+...........+ +-.+.-. -+|.+|+.
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~-------------------------~~~~~~~--~~~~~E~~ 293 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTA-------------------------EESQRNK--YELHNEIK 293 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCH-------------------------HHHHHHH--HHHHHHHH
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchh-------------------------hhhHHHH--HHHHHHHH
Confidence 4567777777777754 799999999764422110000 0000000 12566777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYA 166 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l 166 (864)
.++++.+ +..||+++. ....+||||||+|.+|.++.. .....+..+++..++.. +
T Consensus 294 ~l~~~~~-------------------~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~-~~~~l~~~~I~~QIl~A-L 352 (569)
T 4azs_A 294 FLTQPPA-------------------GFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLA-AGEEIDREKILGSLLRS-L 352 (569)
T ss_dssp HHHSCCT-------------------TCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHH-TTCCCCHHHHHHHHHHH-H
T ss_pred HHHhcCC-------------------CCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHH-hCCCCCHHHHHHHHHHH-H
Confidence 6666422 345787774 466899999999999999865 33456777777776664 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
..+|+.||+||||||+|||++.+ |+++|+|||+++.+...
T Consensus 353 ~ylH~~GIIHRDIKPeNILL~~d--g~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 353 AALEKQGFWHDDVRPWNVMVDAR--QHARLIDFGSIVTTPQD 392 (569)
T ss_dssp HHHHHTTCEESCCCGGGEEECTT--SCEEECCCTTEESCC--
T ss_pred HHHHHCCceeccCchHhEEECCC--CCEEEeecccCeeCCCC
Confidence 89999999999999999999865 89999999999877653
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=1.4e-15 Score=166.57 Aligned_cols=138 Identities=21% Similarity=0.244 Sum_probs=101.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++||+|++|+||+|+.+ +|+.||||+.++....... .+.+|+
T Consensus 51 ~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~-------------------------------------~~~~E~ 93 (321)
T 2c30_A 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRE-------------------------------------LLFNEV 93 (321)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHH-------------------------------------HHHHHH
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHH-------------------------------------HHHHHH
Confidence 58999999999999987 8999999998764321100 133456
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEE-EeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVL-IPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~-vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+.++++ +.+. +-..+. ....+|||||++|.+|.++. ....++...+...+.+++
T Consensus 94 ~~l~~l~h------------------~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l--~~~~l~~~~~~~i~~qi~~~ 153 (321)
T 2c30_A 94 VIMRDYQH------------------FNVVEMYKSYLVGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQA 153 (321)
T ss_dssp HHHTTCCC------------------TTBCCEEEEEEETTEEEEEECCCCSCBHHHHH--TTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------CCcceEEEEEEECCEEEEEEecCCCCCHHHHH--HhcCCCHHHHHHHHHHHHHH
Confidence 55554422 2221 112222 56788999999999998874 344567777766666655
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||+||+++.+ ++++|+|||++..+..
T Consensus 154 L~~LH~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~~~~~~~ 193 (321)
T 2c30_A 154 LAYLHAQGVIHRDIKSDSILLTLD--GRVKLSDFGFCAQISK 193 (321)
T ss_dssp HHHHHHTTEECCCCSGGGEEECTT--CCEEECCCTTCEECCS
T ss_pred HHHHHHCCeecCCCCHHHEEECCC--CcEEEeeeeeeeeccc
Confidence 889999999999999999999865 8999999999887654
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=2.9e-15 Score=167.65 Aligned_cols=141 Identities=16% Similarity=0.253 Sum_probs=96.0
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+.||+|++|+||+|+.. +|+.||||+.+..-... . -.+.+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~----~---------------------------------~~~~~E 136 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD----K---------------------------------EEVKNE 136 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHH----H---------------------------------HHHHHH
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEccccccc----H---------------------------------HHHHHH
Confidence 468999999999999975 79999999987643211 0 013445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
++.+.++++ +. |++++ . ....+|||||++|.+|.+........++...+...+.++
T Consensus 137 ~~~l~~l~h------------------pn--Iv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi 196 (373)
T 2x4f_A 137 ISVMNQLDH------------------AN--LIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQI 196 (373)
T ss_dssp HHHHTTCCC------------------TT--BCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHH
T ss_pred HHHHHhCCC------------------CC--CCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 555554422 12 33333 2 456789999999999987754433446666555554444
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+|..|++|||+||+|||+..+.+++++|+|||++..+..
T Consensus 197 ~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~ 241 (373)
T 2x4f_A 197 CEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP 241 (373)
T ss_dssp HHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCT
T ss_pred HHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCC
Confidence 4 888999999999999999999644458999999999987654
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.55 E-value=8.1e-15 Score=160.51 Aligned_cols=149 Identities=16% Similarity=0.267 Sum_probs=105.1
Q ss_pred cccccccc-cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhH
Q 002927 3 GMFMDFVE-TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 80 (864)
Q Consensus 3 ~~F~~fd~-~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~ 80 (864)
++++.+.- +.||+|++|.||+|+.+ +|+.||+|+.+......
T Consensus 2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~------------------------------------ 45 (321)
T 1tki_A 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQ------------------------------------ 45 (321)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHH------------------------------------
T ss_pred chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccH------------------------------------
Confidence 44555553 78999999999999976 79999999876442211
Q ss_pred hhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHH
Q 002927 81 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 158 (864)
Q Consensus 81 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~ 158 (864)
-.+.+|++.+.++.+ ++ +.+-.++. ....+|||||++|.+|.+........++...+.
T Consensus 46 --~~~~~E~~~l~~l~h------------------pnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~ 105 (321)
T 1tki_A 46 --VLVKKEISILNIARH------------------RNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIV 105 (321)
T ss_dssp --HHHHHHHHHHHHSCC------------------TTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHH
T ss_pred --HHHHHHHHHHHhCCC------------------CCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHH
Confidence 013345555554422 11 22222233 566789999999999987754322346666666
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+.+++ +..+|..|++|+|+||+||+++.+.++.++|+|||++..+.+
T Consensus 106 ~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 106 SYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp HHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred HHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence 6655554 888999999999999999999864358999999999987643
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.55 E-value=8.4e-15 Score=163.10 Aligned_cols=141 Identities=19% Similarity=0.174 Sum_probs=96.4
Q ss_pred cccccccceeeEEEE------ecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRAT------LVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~------l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||+|++|.||+|+ ..+|+.||||+.++.....+.
T Consensus 71 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-------------------------------------- 112 (365)
T 3e7e_A 71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFY-------------------------------------- 112 (365)
T ss_dssp EEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHH--------------------------------------
T ss_pred EEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHH--------------------------------------
Confidence 469999999999994 347999999999876543322
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHh----hcCCCHHHHHH
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE----AFGVNKQKVVE 159 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~----~~~~~~~~l~~ 159 (864)
.|.+.+++++.... ...+.+-..+. ....+|||||++|++|.++.... ...++...+..
T Consensus 113 --~e~~~~~~l~~~~~--------------~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~ 176 (365)
T 3e7e_A 113 --IGTQLMERLKPSMQ--------------HMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVIS 176 (365)
T ss_dssp --HHHHHHHHSCGGGG--------------GGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHH
T ss_pred --HHHHHHHHhhhhhh--------------hhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHH
Confidence 23333333322110 00111222222 56789999999999999986532 23466666666
Q ss_pred HHHHHH--HHHHHhcCeeccCCCCCCeEEcc---------CCCCceEEEeccccccc
Q 002927 160 EITRAY--AHQIYVDGFFNGDPHPGNFLVSK---------DPPHRPILLDFGLTKKL 205 (864)
Q Consensus 160 ~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~---------~~~g~i~LiDFG~~~~l 205 (864)
.+.+++ +..+|..||+|||+||+|||++. +.++.++|+|||++..+
T Consensus 177 i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~ 233 (365)
T 3e7e_A 177 FAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDM 233 (365)
T ss_dssp HHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEG
T ss_pred HHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhh
Confidence 666555 88999999999999999999986 01389999999999654
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.54 E-value=1.3e-14 Score=159.49 Aligned_cols=80 Identities=16% Similarity=0.084 Sum_probs=60.1
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHH-hcCeeccCCCCCCeEEccCCC-----------
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIY-VDGFFNGDPHPGNFLVSKDPP----------- 191 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~-~~G~~H~D~hPgNIlv~~~~~----------- 191 (864)
....+|||||++|+++.+.. .....+...+...+.+++ +..+| +.||+|||+||+|||++.++.
T Consensus 134 ~~~~~lv~E~~~~g~ll~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~ 211 (336)
T 2vuw_A 134 DDQLFIVLEFEFGGIDLEQM--RTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKS 211 (336)
T ss_dssp TTCEEEEEEEECCCEETGGG--TTTCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEE
T ss_pred cCeEEEEEEecCCCccHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCcc
Confidence 45678999999998655443 223456666655555554 88899 999999999999999997520
Q ss_pred -------CceEEEecccccccCh
Q 002927 192 -------HRPILLDFGLTKKLSS 207 (864)
Q Consensus 192 -------g~i~LiDFG~~~~l~~ 207 (864)
..++|+|||+++.+..
T Consensus 212 ~~~~~~~~~vkL~DFG~a~~~~~ 234 (336)
T 2vuw_A 212 STIPSCGLQVSIIDYTLSRLERD 234 (336)
T ss_dssp EEEECTTEEEEECCCTTCBEEET
T ss_pred ccccCCCceEEEeeccccEecCC
Confidence 1899999999987754
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.54 E-value=7.3e-15 Score=163.14 Aligned_cols=140 Identities=17% Similarity=0.153 Sum_probs=96.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||+.+...... +-. .-.+..|.
T Consensus 29 ~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~---~~~-------------------------------~~~~~~E~ 74 (353)
T 3txo_A 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQ---DDD-------------------------------VECTMTEK 74 (353)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH---HTT-------------------------------HHHHHHHH
T ss_pred EEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcc---hhH-------------------------------HHHHHHHH
Confidence 68999999999999976 79999999976421100 000 00122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.. ++ .|.+++ . ....+|||||++|.+|.+.... ...++...+...+.+++
T Consensus 75 ~il~~~~~-----------------hp--~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~ 134 (353)
T 3txo_A 75 RILSLARN-----------------HP--FLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK-SRRFDEARARFYAAEII 134 (353)
T ss_dssp HHHHHTTT-----------------CT--TBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHH
T ss_pred HHHHhccC-----------------CC--ceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 44443321 11 123333 2 4567899999999999877542 34466666555555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|||+||+|||++.+ |.++|+|||+++...
T Consensus 135 ~aL~~LH~~givHrDlkp~NILl~~~--g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 135 SALMFLHDKGIIYRDLKLDNVLLDHE--GHCKLADFGMCKEGI 175 (353)
T ss_dssp HHHHHHHHTTCBCCCCCGGGEEECTT--SCEEECCCTTCBCSC
T ss_pred HHHHHHHHCCCcccCCCHHHEEECCC--CCEEEccccceeecc
Confidence 888999999999999999999865 899999999988643
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=1e-14 Score=154.93 Aligned_cols=138 Identities=18% Similarity=0.195 Sum_probs=102.5
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|+..+++.||||+.+...... -++.+|++
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 57 (269)
T 4hcu_A 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--------------------------------------EDFIEEAE 57 (269)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEEECTTSBCH--------------------------------------HHHHHHHH
T ss_pred heecCCCccEEEEEEecCCCeEEEEEecccccCH--------------------------------------HHHHHHHH
Confidence 6799999999999998889999999987543211 01444665
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.+.++++ + .|++++. ....++||||++|.+|.++........+...+...+.+++
T Consensus 58 ~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~ 117 (269)
T 4hcu_A 58 VMMKLSH------------------P--KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 117 (269)
T ss_dssp HHHTCCC------------------T--TBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHH
T ss_pred HHHhCCC------------------C--CEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHH
Confidence 5555422 1 1333432 4567899999999999988654444466666666655554
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+...
T Consensus 118 ~l~~lH~~~i~H~dikp~Nil~~~~--~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 118 GMAYLEEACVIHRDLAARNCLVGEN--QVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp HHHHHHHTTCCCSCCCGGGEEECGG--GCEEECCTTGGGGBCCH
T ss_pred HHHHHHhCCeecCCcchheEEEcCC--CCEEecccccccccccc
Confidence 889999999999999999999865 89999999999877654
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.9e-14 Score=163.04 Aligned_cols=141 Identities=16% Similarity=0.146 Sum_probs=99.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+.... .. + ...-.+..|.
T Consensus 67 ~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~--~~------------------------------~--~~~~~~~~E~ 112 (412)
T 2vd5_A 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDM--LK------------------------------R--GEVSCFREER 112 (412)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH--HH------------------------------H--GGGCCHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHh--hh------------------------------H--HHHHHHHHHH
Confidence 68999999999999986 799999998763110 00 0 0112245565
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++.+ + .|.+++ . ....+|||||++|++|.++.......++...+...+.+++
T Consensus 113 ~il~~~~h------------------p--~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~ 172 (412)
T 2vd5_A 113 DVLVNGDR------------------R--WITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIV 172 (412)
T ss_dssp HHHHHSCT------------------T--TBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHH
T ss_pred HHHHhcCC------------------C--CeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 55544322 1 123333 2 4557899999999999988653333466655555554544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|+.|++|||+||+|||++.+ |.++|+|||+++.+..
T Consensus 173 ~aL~~LH~~giiHrDLKp~NILld~~--g~vkL~DFGla~~~~~ 214 (412)
T 2vd5_A 173 MAIDSVHRLGYVHRDIKPDNILLDRC--GHIRLADFGSCLKLRA 214 (412)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECCT
T ss_pred HHHHHHHHCCeeecccCHHHeeecCC--CCEEEeechhheeccC
Confidence 888999999999999999999865 8999999999987654
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.4e-14 Score=158.93 Aligned_cols=140 Identities=18% Similarity=0.156 Sum_probs=100.7
Q ss_pred cccccccceeeEEEEec-C---CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV-D---GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~---G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|++|.||+|+.. + +..||||+.+........ -+|.
T Consensus 55 ~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~~~ 98 (325)
T 3kul_A 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR------------------------------------RDFL 98 (325)
T ss_dssp EEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHH------------------------------------HHHH
T ss_pred eEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHH------------------------------------HHHH
Confidence 67999999999999985 3 445999998765432211 1134
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
+|++.+.++++ + .|++++. ....+|||||++|.+|.++.......++...+...+.
T Consensus 99 ~E~~~l~~l~h------------------~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ 158 (325)
T 3kul_A 99 SEASIMGQFDH------------------P--NIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR 158 (325)
T ss_dssp HHHHHHTTCCC------------------T--TBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHH
T ss_pred HHHHHHHhCCC------------------C--CCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHH
Confidence 46555554422 1 1333332 4568899999999999988654444566666666665
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+...
T Consensus 159 qi~~~L~~LH~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 159 GVGAGMRYLSDLGYVHRDLAARNVLVDSN--LVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCCSSCEECC--
T ss_pred HHHHHHHHHHHCCeeCCCCCcceEEECCC--CCEEECCCCcccccccC
Confidence 554 889999999999999999999865 89999999999877543
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.53 E-value=1e-14 Score=159.27 Aligned_cols=78 Identities=14% Similarity=0.202 Sum_probs=58.3
Q ss_pred ceEEEeecCCcCCCChHHHhh--cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 129 TVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~~~--~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
.+|||||++|.+|.++..... .......+...+.+++ +..+|+.|++|||+||+||+++.+ +.++|+|||+++.
T Consensus 136 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~kL~DfG~a~~ 213 (332)
T 3qd2_B 136 LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMD--DVVKVGDFGLVTA 213 (332)
T ss_dssp EEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEE
T ss_pred EEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCC--CCEEEeecCcccc
Confidence 579999999999988754211 1122222333333333 788999999999999999999865 8999999999998
Q ss_pred cChH
Q 002927 205 LSSS 208 (864)
Q Consensus 205 l~~~ 208 (864)
+...
T Consensus 214 ~~~~ 217 (332)
T 3qd2_B 214 MDQD 217 (332)
T ss_dssp CSCC
T ss_pred cccc
Confidence 7754
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=99.53 E-value=1.6e-14 Score=158.79 Aligned_cols=138 Identities=17% Similarity=0.269 Sum_probs=98.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+........ .+. + .+.+|+
T Consensus 21 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~--~~~---------------------------~------~~~~E~ 65 (328)
T 3fe3_A 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNP--TSL---------------------------Q------KLFREV 65 (328)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH--HHH---------------------------H------HHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCH--HHH---------------------------H------HHHHHH
Confidence 78999999999999975 89999999875432110 000 0 133466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++++ ++ |.+++ . ....+|||||++|.+|.++... ...+....+...+.+++
T Consensus 66 ~~l~~l~h------------------pn--Iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~ 124 (328)
T 3fe3_A 66 RIMKILNH------------------PN--IVKLFEVIETEKTLYLIMEYASGGEVFDYLVA-HGRMKEKEARSKFRQIV 124 (328)
T ss_dssp HHHHHCCC------------------TT--BCCEEEEEECSSEEEEEECCCTTCBHHHHHHH-HCCCCHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------CC--EeeEEEEEEECCEEEEEEECCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 55555432 11 23333 2 4567899999999999887542 34466665555555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|+.|++|||+||+||+++.+ +.++|+|||++..+.
T Consensus 125 ~al~~lH~~~ivHrDlkp~NIll~~~--~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 125 SAVQYCHQKRIVHRDLKAENLLLDAD--MNIKIADFGFSNEFT 165 (328)
T ss_dssp HHHHHHHHTTCCCSCCCGGGEEECTT--SCEEECSTTCCGGGS
T ss_pred HHHHHHHHCCEeccCCCHHHEEEcCC--CCEEEeeccCceecC
Confidence 888999999999999999999865 899999999987654
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=1.7e-14 Score=152.90 Aligned_cols=137 Identities=18% Similarity=0.188 Sum_probs=102.2
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|+.++++.||||+.+...... -++.+|++
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 55 (268)
T 3sxs_A 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE--------------------------------------DEFFQEAQ 55 (268)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECBTTBCH--------------------------------------HHHHHHHH
T ss_pred eeeccCCCceEEEEEecCceeEEEEEeccCCCcH--------------------------------------HHHHHHHH
Confidence 6799999999999998888899999987543211 01344665
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.+.++++ + .|++++. ....++||||++|.+|.++.......++...+...+.+++
T Consensus 56 ~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~ 115 (268)
T 3sxs_A 56 TMMKLSH------------------P--KLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCE 115 (268)
T ss_dssp HHHHCCC------------------T--TBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHH
T ss_pred HHHhCCC------------------C--CEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHH
Confidence 5555432 1 1233332 4557899999999999988765444567776666666654
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||+||+++.+ +.++|+|||++.....
T Consensus 116 ~l~~lH~~~i~H~dikp~Nil~~~~--~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 116 GMAFLESHQFIHRDLAARNCLVDRD--LCVKVSDFGMTRYVLD 156 (268)
T ss_dssp HHHHHHHTTEEESSCSGGGEEECTT--CCEEECCTTCEEECCT
T ss_pred HHHHHHHCCeecCCcCcceEEECCC--CCEEEccCccceecch
Confidence 888999999999999999999865 8999999999876543
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=99.52 E-value=1.8e-14 Score=157.95 Aligned_cols=141 Identities=16% Similarity=0.265 Sum_probs=97.7
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.++||+|++|.||+|+.+ +|+.||||+......... .+|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~e 55 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANT----------------------------------------QKE 55 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHH----------------------------------------HHH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhH----------------------------------------HHH
Confidence 478999999999999986 799999999865433222 224
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.+.+.++.. +++ +.+-.++. ....+|||||++|.+|.+.... ...++...+...+.+++
T Consensus 56 ~~~l~~l~~-----------------h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~ 117 (325)
T 3kn6_A 56 ITALKLCEG-----------------HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKK-KKHFSETEASYIMRKLVS 117 (325)
T ss_dssp HHHHHHTTT-----------------CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-CSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHhcC-----------------CCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 444443321 111 12222233 4567899999999999887542 33466666666555554
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCC-CCceEEEecccccccChH
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|+.|++|+|+||+||+++.++ +..++|+|||++......
T Consensus 118 ~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 118 AVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp HHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred HHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 8899999999999999999998541 137999999999876543
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=1.3e-14 Score=162.45 Aligned_cols=138 Identities=17% Similarity=0.208 Sum_probs=102.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.++...... .-+|.+|+
T Consensus 120 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~~~~E~ 163 (377)
T 3cbl_A 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL------------------------------------KAKFLQEA 163 (377)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHH------------------------------------HTTTTHHH
T ss_pred eEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHH------------------------------------HHHHHHHH
Confidence 68999999999999987 899999999876532210 11245566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ + .|.+++. ....+|||||++|.+|.++.......++...+...+.+++
T Consensus 164 ~~l~~l~h------------------p--niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~ 223 (377)
T 3cbl_A 164 RILKQYSH------------------P--NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAA 223 (377)
T ss_dssp HHHTTCCC------------------T--TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------C--CEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 66555422 1 1333332 4567899999999999888654444566666666665554
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|||+||.|||++.+ +.++|+|||++....
T Consensus 224 ~~l~~LH~~~ivHrDlkp~Nil~~~~--~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 224 AGMEYLESKCCIHRDLAARNCLVTEK--NVLKISDFGMSREEA 264 (377)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCGGGCEECT
T ss_pred HHHHHHHHCCcCCcccCHHHEEEcCC--CcEEECcCCCceecC
Confidence 888999999999999999999865 899999999987643
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.52 E-value=1.4e-14 Score=154.94 Aligned_cols=138 Identities=18% Similarity=0.181 Sum_probs=99.9
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|+..+++.||||+.+...... -++.+|++
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 71 (283)
T 3gen_A 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE--------------------------------------DEFIEEAK 71 (283)
T ss_dssp EECC---CEEEEEEEETTTEEEEEEEECTTSBCH--------------------------------------HHHHHHHH
T ss_pred hhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCH--------------------------------------HHHHHHHH
Confidence 6899999999999998888899999987543210 01334555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.+.++.+ + .|++++. ....++||||++|.+|.++........+...+...+.+++
T Consensus 72 ~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~ 131 (283)
T 3gen_A 72 VMMNLSH------------------E--KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 131 (283)
T ss_dssp HHHTCCC------------------T--TBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHH
T ss_pred HHhcCCC------------------C--CEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHH
Confidence 5554421 1 1333332 4567899999999999988654345677777666666655
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+|+||+||+++.+ ++++|+|||++..+...
T Consensus 132 ~l~~lH~~~i~H~dikp~Nili~~~--~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 132 AMEYLESKQFLHRDLAARNCLVNDQ--GVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp HHHHHHHTTCCCSSCSGGGEEECTT--SCEEECSTTGGGGBCCH
T ss_pred HHHHHHHCCccCCCCccceEEEcCC--CCEEEcccccccccccc
Confidence 889999999999999999999865 89999999999877653
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.1e-14 Score=155.80 Aligned_cols=141 Identities=16% Similarity=0.127 Sum_probs=100.9
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+.||+|++|.||+|+.. +|+.||||+....-.... -.|.+|
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~-------------------------------------~~~~~E 57 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQ-------------------------------------RTFLKE 57 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHH-------------------------------------HHHHHH
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHH-------------------------------------HHHHHH
Confidence 368999999999999976 799999998754322110 014456
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
++.+.++++ + .|++++ . ....++||||++|.+|.++........+...+...+.++
T Consensus 58 ~~~l~~l~h------------------p--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi 117 (310)
T 3s95_A 58 VKVMRCLEH------------------P--NVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDI 117 (310)
T ss_dssp HHHHTTCCC------------------T--TBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHH
T ss_pred HHHHHhCCC------------------c--CcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHH
Confidence 655554422 1 133333 2 456789999999999998865434456666665555554
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
+ +..+|+.|++|+|+||+||+++.+ +.++|+|||++..+....
T Consensus 118 ~~al~~lH~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 118 ASGMAYLHSMNIIHRDLNSHNCLVREN--KNVVVADFGLARLMVDEK 162 (310)
T ss_dssp HHHHHHHHHTTEECSCCSTTSEEECTT--SCEEECCCTTCEECC---
T ss_pred HHHHHHHHhCCccCCCCCcCeEEECCC--CCEEEeecccceeccccc
Confidence 4 889999999999999999999865 899999999998876543
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=1.7e-14 Score=157.04 Aligned_cols=146 Identities=18% Similarity=0.227 Sum_probs=98.4
Q ss_pred cccccccc-cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 3 GMFMDFVE-TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 3 ~~F~~fd~-~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
.+.+.+.. +.||+|++|.||+|+.++|+.||||+.+...... ...
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-----------------------------~~~----- 63 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDE-----------------------------GIP----- 63 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC-----------------------------------CHH-----
T ss_pred chHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccc-----------------------------hhh-----
Confidence 34455543 7899999999999999899999999876432210 000
Q ss_pred hccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHH
Q 002927 82 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKV 157 (864)
Q Consensus 82 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l 157 (864)
-.+.+|++.+.++++ + .|.+++ . ....+|||||++| ++.+.......++....+
T Consensus 64 -~~~~~E~~~l~~l~h------------------p--~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~ 121 (311)
T 3niz_A 64 -STAIREISLLKELHH------------------P--NIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQI 121 (311)
T ss_dssp -HHHHHHHHHHHHCCC------------------T--TBCCEEEEECCSSCEEEEEECCSE-EHHHHHHTCTTCCCHHHH
T ss_pred -HHHHHHHHHHHHcCC------------------C--CEeeeeeEEccCCEEEEEEcCCCC-CHHHHHHhccCCCCHHHH
Confidence 013345655555422 1 123333 2 4567899999997 454443323334666666
Q ss_pred HHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 158 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 158 ~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
...+.+++ +..+|+.|++|+|+||+|||++.+ +.++|+|||++..+.
T Consensus 122 ~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~--~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 122 KIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSD--GALKLADFGLARAFG 170 (311)
T ss_dssp HHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEETT
T ss_pred HHHHHHHHHHHHHHHHCCcccCCCchHhEEECCC--CCEEEccCcCceecC
Confidence 55555544 888999999999999999999865 899999999998764
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=2e-14 Score=155.43 Aligned_cols=136 Identities=15% Similarity=0.182 Sum_probs=98.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.+..-... . -.+.+|+
T Consensus 26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------~--------------~~~~~E~ 68 (297)
T 3fxz_A 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-----------------------K--------------ELIINEI 68 (297)
T ss_dssp EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC-----------------------H--------------HHHHHHH
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEeecccccH-----------------------H--------------HHHHHHH
Confidence 67999999999999965 89999999875322110 0 0133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++.+ + .|.+++ . ....+|||||++|.+|.++.. ....+...+...+.+++
T Consensus 69 ~~l~~l~h------------------p--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~qi~ 126 (297)
T 3fxz_A 69 LVMRENKN------------------P--NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECL 126 (297)
T ss_dssp HHHHHCCC------------------T--TBCCEEEEEEETTEEEEEEECCTTCBHHHHHH--HSCCCHHHHHHHHHHHH
T ss_pred HHHhcCCC------------------C--CCCeEeEEEEECCEEEEEEECCCCCCHHHHHh--hcCCCHHHHHHHHHHHH
Confidence 44444321 1 123333 2 566789999999999988753 44567666666555554
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||+|||++.+ ++++|+|||++..+..
T Consensus 127 ~~l~~lH~~~i~H~Dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 127 QALEFLHSNQVIHRDIKSDNILLGMD--GSVKLTDFGFCAQITP 168 (297)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEECTT--CCEEECCCTTCEECCS
T ss_pred HHHHHHHhCCceeCCCCHHHEEECCC--CCEEEeeCCCceecCC
Confidence 888999999999999999999865 8999999999887654
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=2.1e-14 Score=163.87 Aligned_cols=141 Identities=15% Similarity=0.111 Sum_probs=99.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||+.+..... . -...-.+..|.
T Consensus 80 ~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~----------------~------------------~~~~~~~~~E~ 125 (437)
T 4aw2_A 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML----------------K------------------RAETACFREER 125 (437)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH----------------H------------------TTTTCCHHHHH
T ss_pred EEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhh----------------h------------------HHHHHHHHHHH
Confidence 68999999999999987 6899999987531000 0 00112255566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+..+.+ +. |.+++ . ....+|||||++|++|.++.......++...+...+.+++
T Consensus 126 ~il~~~~h------------------p~--Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~ 185 (437)
T 4aw2_A 126 DVLVNGDS------------------KW--ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMV 185 (437)
T ss_dssp HHHHHSCT------------------TT--BCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------CC--EEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHH
Confidence 65554322 11 22333 2 4567899999999999887643234566665555555444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..||+|||+||+|||++.+ |.++|+|||+++.+..
T Consensus 186 ~aL~~LH~~giiHrDLKp~NILl~~~--g~vkL~DFGla~~~~~ 227 (437)
T 4aw2_A 186 IAIDSVHQLHYVHRDIKPDNILMDMN--GHIRLADFGSCLKLME 227 (437)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECCT
T ss_pred HHHHHHHhCCeEecccCHHHeeEcCC--CCEEEcchhhhhhccc
Confidence 888999999999999999999865 8999999999977643
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.51 E-value=1.6e-14 Score=162.39 Aligned_cols=142 Identities=22% Similarity=0.315 Sum_probs=100.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||+|+......... ..+.+|+
T Consensus 57 ~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~-------------------------------------~~~~~E~ 99 (387)
T 1kob_A 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDK-------------------------------------YTVKNEI 99 (387)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHH-------------------------------------HHHHHHH
T ss_pred EEEecCCCEEEEEEEECCCCCEEEEEEecccchhhH-------------------------------------HHHHHHH
Confidence 67999999999999986 799999999765432110 0133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.+ +. +.+-.++. ....+|||||++|.+|.+........++...+...+.+++
T Consensus 100 ~il~~l~h------------------pnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~a 161 (387)
T 1kob_A 100 SIMNQLHH------------------PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEG 161 (387)
T ss_dssp HHHTTCCS------------------TTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------cCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHH
Confidence 55444321 11 22222232 4567899999999999876543333456666666655554
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||+|||++.+.++.++|+|||++..+..
T Consensus 162 L~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 162 LKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp HHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred HHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 888999999999999999999854457899999999987754
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.7e-14 Score=155.78 Aligned_cols=141 Identities=19% Similarity=0.223 Sum_probs=98.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.+......- +..+ .+.+|+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----------------------------~~~~------~~~~e~ 62 (294)
T 4eqm_A 17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKE----------------------------ETLK------RFEREV 62 (294)
T ss_dssp EEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCH----------------------------HHHH------HHHHHH
T ss_pred EEEccCCCEEEEEEEECCCCCeEEEEEeccCccccH----------------------------HHHH------HHHHHH
Confidence 68999999999999976 799999998753221100 0000 134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++++ + .|++++. ....++||||++|.+|.++... ...++...+...+.+++
T Consensus 63 ~~l~~l~h------------------p--~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~qi~ 121 (294)
T 4eqm_A 63 HNSSQLSH------------------Q--NIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES-HGPLSVDTAINFTNQIL 121 (294)
T ss_dssp HHHTTCCB------------------T--TBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HCSCCHHHHHHHHHHHH
T ss_pred HHHhcCCC------------------C--CCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHH
Confidence 55544422 1 2333332 4557899999999999987642 23466666666555554
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|+.|++|+|+||+||+++.+ ++++|+|||++..+...
T Consensus 122 ~~l~~lH~~~i~H~Dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 122 DGIKHAHDMRIVHRDIKPQNILIDSN--KTLKIFDFGIAKALSET 164 (294)
T ss_dssp HHHHHHHHTTCCCCCCCGGGEEECTT--SCEEECCCSSSTTC---
T ss_pred HHHHHHHHCCcccCCCCHHHEEECCC--CCEEEEeCCCccccccc
Confidence 889999999999999999999865 89999999999877543
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1.3e-14 Score=161.64 Aligned_cols=150 Identities=19% Similarity=0.247 Sum_probs=100.9
Q ss_pred cccccccceeeEEEEecC------CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLVD------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||+|++|.||+|++++ ++.||||+.+.... ....++++++.+.. ..
T Consensus 41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~e~~~~~~~~~-------------------------~~ 94 (364)
T 3op5_A 41 LPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG-PLFTELKFYQRAAK-------------------------PE 94 (364)
T ss_dssp EECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCH-HHHHHHHHHHHHCC-------------------------HH
T ss_pred EEEecCCCeEEEEeeecCccccccccceEEEEeeccch-hHHHHHHHHHhhhh-------------------------hH
Confidence 689999999999999764 58899999876543 23333333322210 01
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----c----CCceEEEeecCCcCCCChHHHhhcCCCHHH
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----S----SETVLILEFMDGIRLNDCESLEAFGVNKQK 156 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~----~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ 156 (864)
+..|...+..+ .+..|++++. . ...+|||||+ |.+|.++.......++...
T Consensus 95 ~~~e~~~~~~l--------------------~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~ 153 (364)
T 3op5_A 95 QIQKWIRTRKL--------------------KYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKT 153 (364)
T ss_dssp HHHHHHHHTTC--------------------SCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHH
T ss_pred HHHHHHHHhhc--------------------cCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHH
Confidence 11222222211 1233444443 1 2368999999 9999988654445577777
Q ss_pred HHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 157 VVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 157 l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+...+.+++ +..+|..|++|||+||.|||++.+.++.++|+|||+++.+..
T Consensus 154 ~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~ 206 (364)
T 3op5_A 154 VLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCP 206 (364)
T ss_dssp HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSG
T ss_pred HHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceeccc
Confidence 777666655 889999999999999999999843358999999999977654
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.51 E-value=2.2e-14 Score=154.47 Aligned_cols=141 Identities=21% Similarity=0.250 Sum_probs=98.3
Q ss_pred cccccccceeeEEEEe-----cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l-----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||+|++|.||+|+. .+|+.||||+.+........ ++
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-------------------------------------~~ 58 (295)
T 3ugc_A 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-------------------------------------DF 58 (295)
T ss_dssp EEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHH-------------------------------------HH
T ss_pred heeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHH-------------------------------------HH
Confidence 6799999999999984 26899999998755332110 13
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
.+|++.+.++++. .-+.+-.++. ....+|||||++|.+|.++.......++...+...+.
T Consensus 59 ~~E~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 121 (295)
T 3ugc_A 59 EREIEILKSLQHD-----------------NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121 (295)
T ss_dssp HHHHHHHHTCCCT-----------------TBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCC-----------------CEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHH
Confidence 4466555554321 0112222222 2457899999999999988654444466666666555
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++..+..
T Consensus 122 qi~~~l~~lH~~~ivH~Dikp~Nil~~~~--~~~kl~Dfg~~~~~~~ 166 (295)
T 3ugc_A 122 QICKGMEYLGTKRYIHRDLATRNILVENE--NRVKIGDFGLTKVLPQ 166 (295)
T ss_dssp HHHHHHHHHHHTTCCCSCCSGGGEEEEET--TEEEECCCCSCC----
T ss_pred HHHHHHHHHhcCCcccCCCCHhhEEEcCC--CeEEEccCcccccccC
Confidence 554 888999999999999999999976 8999999999987654
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=99.51 E-value=1.1e-14 Score=170.42 Aligned_cols=144 Identities=14% Similarity=0.147 Sum_probs=99.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+...... ....-.+.+|.
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~----------------------------------~~~~~~~~~E~ 236 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK----------------------------------RKGYQGAMVEK 236 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHH----------------------------------TTCHHHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhh----------------------------------hHHHHHHHHHH
Confidence 56999999999999986 79999999875321100 00111244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHh---hcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+.+ -+.+-..+. ....+|||||++|++|.+..... ...++...+...+.+++
T Consensus 237 ~iL~~l~hp~-----------------Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~ 299 (543)
T 3c4z_A 237 KILAKVHSRF-----------------IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV 299 (543)
T ss_dssp HHHHHCCCTT-----------------BCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHH
T ss_pred HHHHhcCCCC-----------------EeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHH
Confidence 6666543211 111112222 45678999999999998764321 12356655555554544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..||+|||+||+|||++.+ |.++|+|||+++.+..
T Consensus 300 ~aL~~LH~~gIvHrDLKP~NILl~~~--g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 300 SGLEHLHQRNIIYRDLKPENVLLDDD--GNVRISDLGLAVELKA 341 (543)
T ss_dssp HHHHHHHHTTEECCCCCGGGEEECTT--SCEEECCCTTCEECCT
T ss_pred HHHHHHHHcCCcccCCChHHEEEeCC--CCEEEeecceeeeccC
Confidence 889999999999999999999865 8999999999987654
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.51 E-value=1.5e-14 Score=159.06 Aligned_cols=140 Identities=18% Similarity=0.177 Sum_probs=97.2
Q ss_pred cccccccceeeEEEEec-C----CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV-D----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||+|++|+||+|+.+ + +..||||+.+++..... +.++
T Consensus 50 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~~ 93 (333)
T 1mqb_A 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQ------------------------------------RVDF 93 (333)
T ss_dssp EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHH------------------------------------HHHH
T ss_pred cEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHH------------------------------------HHHH
Confidence 78999999999999975 2 23699999876543211 1124
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 161 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~ 161 (864)
.+|++.+.++.+ + .|++++. ....+|||||++|.+|.++.......++...+...+
T Consensus 94 ~~E~~~l~~l~h------------------~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~ 153 (333)
T 1mqb_A 94 LGEAGIMGQFSH------------------H--NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGML 153 (333)
T ss_dssp HHHHHHHHTCCC------------------T--TBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHH
T ss_pred HHHHHHHHhCCC------------------C--CCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHH
Confidence 456665555422 1 1333332 456789999999999998865444456777766666
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+...
T Consensus 154 ~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~--~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 154 RGIAAGMKYLANMNYVHRDLAARNILVNSN--LVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp HHHHHHHHHHHHTTCCCSCCCGGGEEECTT--CCEEECCCCC-------
T ss_pred HHHHHHHHHHHhCCeeCCCCChheEEECCC--CcEEECCCCcchhhccc
Confidence 6655 888999999999999999999865 89999999999876543
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.51 E-value=1.4e-14 Score=162.13 Aligned_cols=141 Identities=17% Similarity=0.177 Sum_probs=95.3
Q ss_pred ccccccccceeeEEEEec----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 10 ETPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
.+.||+|++|.||+|+++ +++.||||+.+.+...... -+|
T Consensus 50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~ 93 (373)
T 2qol_A 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR------------------------------------RDF 93 (373)
T ss_dssp CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHH------------------------------------HHH
T ss_pred eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHH------------------------------------HHH
Confidence 368999999999999975 5788999998765432211 124
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 161 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~ 161 (864)
.+|++.+.++.+ + .|++++. ....+|||||++|.+|.++.......++...+...+
T Consensus 94 ~~E~~~l~~l~h------------------~--niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~ 153 (373)
T 2qol_A 94 LGEASIMGQFDH------------------P--NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153 (373)
T ss_dssp HHHHHHHTTCCC------------------T--TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHH
T ss_pred HHHHHHHHhCCC------------------C--CCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHH
Confidence 456655555422 1 2333432 456789999999999998865433356666666655
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++..+...
T Consensus 154 ~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 154 RGIASGMKYLSDMGYVHRDLAARNILINSN--LVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp HHHHHHHHHHHHTTCCCSCCCGGGEEECTT--CCEEECCC---------
T ss_pred HHHHHHHHHHHHCCeeCCCCCcceEEEcCC--CCEEECcCccccccccC
Confidence 5554 889999999999999999999865 89999999999876543
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.51 E-value=2.4e-14 Score=154.53 Aligned_cols=165 Identities=13% Similarity=0.110 Sum_probs=97.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.++.....-. .+ .+..... ............-...-.+.+|+
T Consensus 19 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~-~~--~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~E~ 87 (298)
T 2zv2_A 19 DEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQA-GF--PRRPPPR--------GTRPAPGGCIQPRGPIEQVYQEI 87 (298)
T ss_dssp EEEEC--CCEEEEEEETTTTEEEEEEEEECC------------------------------------------CHHHHHH
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhc-cc--ccccccc--------cccccccccccccchHHHHHHHH
Confidence 68999999999999976 7999999998765321100 00 0000000 00000000000000112356677
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
+.+.++.+. .-+.+-.++. ....+|||||++|.+|.++.. ...++...+...+.+++
T Consensus 88 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~qi~~ 148 (298)
T 2zv2_A 88 AILKKLDHP-----------------NVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT--LKPLSEDQARFYFQDLIK 148 (298)
T ss_dssp HHHHTCCCT-----------------TBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC--SSCCCHHHHHHHHHHHHH
T ss_pred HHHHhCCCC-----------------CCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh--cCCCCHHHHHHHHHHHHH
Confidence 766665321 1122223332 234689999999999988643 33466666655555544
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||+||+++.+ ++++|+|||++..+..
T Consensus 149 ~l~~lH~~~ivH~Dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 189 (298)
T 2zv2_A 149 GIEYLHYQKIIHRDIKPSNLLVGED--GHIKIADFGVSNEFKG 189 (298)
T ss_dssp HHHHHHHTTEECCCCCGGGEEECTT--SCEEECCCTTCEECSS
T ss_pred HHHHHHHCCeeccCCCHHHEEECCC--CCEEEecCCCcccccc
Confidence 888999999999999999999865 8999999999987653
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=2.4e-14 Score=162.08 Aligned_cols=139 Identities=17% Similarity=0.185 Sum_probs=98.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+..... . -...-.+..|.
T Consensus 75 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~----------------~------------------~~~~~~~~~E~ 120 (410)
T 3v8s_A 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI----------------K------------------RSDSAFFWEER 120 (410)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH----------------H------------------TCCCSTHHHHH
T ss_pred EEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhh----------------h------------------hHHHHHHHHHH
Confidence 68999999999999987 7999999987531000 0 00111244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+..+.+ +. |.+++. ....+|||||++|++|.++.. ...+....+...+.+++
T Consensus 121 ~il~~l~h------------------p~--Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~--~~~~~e~~~~~~~~qi~ 178 (410)
T 3v8s_A 121 DIMAFANS------------------PW--VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS--NYDVPEKWARFYTAEVV 178 (410)
T ss_dssp HHHHHCCC------------------TT--BCCEEEEEECSSEEEEEECCCTTEEHHHHHH--HCCCCHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------CC--CCeEEEEEEECCEEEEEEeCCCCCcHHHHHH--cCCCCHHHHHHHHHHHH
Confidence 55554322 11 233332 455789999999999988753 44566555555444444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||+|||++.+ |.++|+|||+++.+..
T Consensus 179 ~aL~~LH~~givHrDLKp~NILl~~~--g~ikL~DFG~a~~~~~ 220 (410)
T 3v8s_A 179 LALDAIHSMGFIHRDVKPDNMLLDKS--GHLKLADFGTCMKMNK 220 (410)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECCT
T ss_pred HHHHHHHHCCeEeccCCHHHeeECCC--CCEEEeccceeEeecc
Confidence 889999999999999999999865 8999999999987654
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=99.51 E-value=1.5e-14 Score=159.48 Aligned_cols=138 Identities=14% Similarity=0.115 Sum_probs=95.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+...... . - ..-.+.+|.
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~--~------------------~--------------~~~~~~~E~ 56 (337)
T 1o6l_A 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--K------------------D--------------EVAHTVTES 56 (337)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--T------------------T--------------CHHHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhh--h------------------h--------------HHHHHHHHH
Confidence 78999999999999986 79999999976321100 0 0 000133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.+++ ++ .|.+++ . ....+|||||++|.+|.+.... ...++...+...+.+++
T Consensus 57 ~~l~~l~------------------hp--~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~ 115 (337)
T 1o6l_A 57 RVLQNTR------------------HP--FLTALKYAFQTHDRLCFVMEYANGGELFFHLSR-ERVFTEERARFYGAEIV 115 (337)
T ss_dssp HHHHSCC------------------CT--TBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HSCCCHHHHHHHHHHHH
T ss_pred HHHHhCC------------------CC--cCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHH
Confidence 4444332 11 123333 2 4567899999999999876542 33456655555554444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..|++|||+||+|||++.+ |.++|+|||+++..
T Consensus 116 ~aL~~LH~~~ivHrDlkp~NIll~~~--g~vkL~DFG~a~~~ 155 (337)
T 1o6l_A 116 SALEYLHSRDVVYRDIKLENLMLDKD--GHIKITDFGLCKEG 155 (337)
T ss_dssp HHHHHHHHTTCBCCCCCGGGEEECTT--SCEEECCCTTCBCS
T ss_pred HHHHHHHHCCeecCcCCHHHEEECCC--CCEEEeeccchhhc
Confidence 888999999999999999999865 89999999998754
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=2.8e-14 Score=155.78 Aligned_cols=143 Identities=20% Similarity=0.275 Sum_probs=99.8
Q ss_pred ccccc-ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 5 FMDFV-ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 5 F~~fd-~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
...|+ .+.||+|++|.||+|+.++|+.||||+..+.......
T Consensus 38 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~------------------------------------- 80 (321)
T 2qkw_B 38 TNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIE------------------------------------- 80 (321)
T ss_dssp CCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHH-------------------------------------
T ss_pred HhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHH-------------------------------------
Confidence 34444 3689999999999999888999999987764321100
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh---cCCCHHH
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA---FGVNKQK 156 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~---~~~~~~~ 156 (864)
.+.+|++.+.+++ ++ .|.+++. ....++||||++|.+|.++..... ...+...
T Consensus 81 ~~~~E~~~l~~l~------------------h~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 140 (321)
T 2qkw_B 81 EFETEIETLSFCR------------------HP--HLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQ 140 (321)
T ss_dssp HHHHHHHGGGSCC------------------CT--TBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHH
T ss_pred HHHHHHHHHHhCC------------------CC--CEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHH
Confidence 1333444443332 11 2333432 466899999999999988753211 1255555
Q ss_pred HHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 157 VVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 157 l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 141 ~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~ 190 (321)
T 2qkw_B 141 RLEICIGAARGLHYLHTRAIIHRDVKSINILLDEN--FVPKITDFGISKKGT 190 (321)
T ss_dssp HHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTT--CCEEECCCTTCEECS
T ss_pred HHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCC--CCEEEeecccccccc
Confidence 555555544 888999999999999999999865 899999999987643
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=4.2e-14 Score=155.13 Aligned_cols=139 Identities=19% Similarity=0.204 Sum_probs=93.0
Q ss_pred cccccccceeeEEEEe----cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATL----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|++|.||+|+. .+|+.||||+.+......-..+ ...+.
T Consensus 23 ~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~---------------------------------~~~~~ 69 (327)
T 3a62_A 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKD---------------------------------TAHTK 69 (327)
T ss_dssp EEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC----------------------------------------------
T ss_pred EEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhH---------------------------------HHHHH
Confidence 6799999999999997 3799999999876532110000 01133
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
+|.+.+.++++ + .|.+++ . ....+|||||++|.+|.+.... ...+....+...+.
T Consensus 70 ~E~~~l~~l~h------------------p--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ 128 (327)
T 3a62_A 70 AERNILEEVKH------------------P--FIVDLIYAFQTGGKLYLILEYLSGGELFMQLER-EGIFMEDTACFYLA 128 (327)
T ss_dssp -HHHHHHHCCC------------------T--TBCCEEEEEECSSCEEEEEECCTTEEHHHHHHH-HSSCCHHHHHHHHH
T ss_pred HHHHHHHhCCC------------------C--CccceeEEEEcCCEEEEEEeCCCCCcHHHHHHh-CCCCCHHHHHHHHH
Confidence 45555555432 1 123333 2 5667899999999999877542 23455555555554
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+++ +..+|..|++|||+||.|||++.+ |.++|+|||++...
T Consensus 129 qi~~al~~lH~~~ivH~Dlkp~Nill~~~--~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 129 EISMALGHLHQKGIIYRDLKPENIMLNHQ--GHVKLTDFGLCKES 171 (327)
T ss_dssp HHHHHHHHHHHTTCCCCCCCTTTEEECTT--SCEEECCCSCC---
T ss_pred HHHHHHHHHHhCCEEcccCCHHHeEECCC--CcEEEEeCCccccc
Confidence 444 888999999999999999999865 89999999998754
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=99.50 E-value=3.8e-14 Score=158.34 Aligned_cols=140 Identities=19% Similarity=0.236 Sum_probs=98.5
Q ss_pred cccccccceeeEEEEec--------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhh
Q 002927 11 TPLATASIAQVHRATLV--------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 82 (864)
Q Consensus 11 ~plasaSigqV~~A~l~--------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 82 (864)
+.||+|++|+||+|+.. +++.||||+.+....... .+
T Consensus 87 ~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~-------------------------------- 131 (370)
T 2psq_A 87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD---LS-------------------------------- 131 (370)
T ss_dssp EEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHH---HH--------------------------------
T ss_pred eEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHH---HH--------------------------------
Confidence 67999999999999852 456799999876533211 00
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh---------
Q 002927 83 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA--------- 149 (864)
Q Consensus 83 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~--------- 149 (864)
++.+|++.+.++.+ ++ .|.+++. ....+|||||++|++|.++.....
T Consensus 132 -~~~~E~~~l~~l~~-----------------hp--nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~ 191 (370)
T 2psq_A 132 -DLVSEMEMMKMIGK-----------------HK--NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 191 (370)
T ss_dssp -HHHHHHHHHHHSCC-----------------CT--TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-------
T ss_pred -HHHHHHHHHHHhcC-----------------CC--CEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCcccccccc
Confidence 14456666655411 11 1333332 466899999999999988764321
Q ss_pred ------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 150 ------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 150 ------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+....+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++..+..
T Consensus 192 ~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~--~~~kl~DFG~a~~~~~ 255 (370)
T 2psq_A 192 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN--NVMKIADFGLARDINN 255 (370)
T ss_dssp ----CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT--CCEEECCCSSCEETTC
T ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCC--CCEEEccccCCcccCc
Confidence 1245555555555544 888999999999999999999865 8999999999986643
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.1e-14 Score=158.44 Aligned_cols=140 Identities=23% Similarity=0.376 Sum_probs=94.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.. +|+.||||+.+......-. ... .+.+|+
T Consensus 18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~----------------------------~~~------~~~~E~ 63 (311)
T 3ork_A 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPS----------------------------FYL------RFRREA 63 (311)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHH----------------------------HHH------HHHHHH
T ss_pred EEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHH----------------------------HHH------HHHHHH
Confidence 78999999999999975 8999999998764321100 000 133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCc----eEEEeecCCcCCCChHHHhhcCCCHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSET----VLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 161 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~----vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~ 161 (864)
+.+.++. ++ .|.+++. .... +|||||++|.+|.++... ...++...+...+
T Consensus 64 ~~l~~l~------------------hp--~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~~ 122 (311)
T 3ork_A 64 QNAAALN------------------HP--AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVI 122 (311)
T ss_dssp TTCCCCC------------------CT--TBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHH-HCSCCHHHHHHHH
T ss_pred HHHHcCC------------------CC--CcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHH
Confidence 3333221 12 2333432 2222 899999999999988653 3346666666655
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 123 ~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 123 ADACQALNFSHQNGIIHRDVKPANIMISAT--NAVKVMDFGIARAIAD 168 (311)
T ss_dssp HHHHHHHHHHHHTTCCCCCCCGGGEEEETT--SCEEECCCSCC-----
T ss_pred HHHHHHHHHHHHCCCCcCCCCHHHEEEcCC--CCEEEeeccCcccccc
Confidence 5554 888999999999999999999865 8999999999987654
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=3.8e-14 Score=155.25 Aligned_cols=143 Identities=17% Similarity=0.177 Sum_probs=99.8
Q ss_pred ccccc-ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhh
Q 002927 5 FMDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 82 (864)
Q Consensus 5 F~~fd-~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 82 (864)
++.|+ .+.||+|++|.||+|+.+ +|+.||||+........ .+
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~ 49 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD------------------------------------CP 49 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC------------------------------------------
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccc------------------------------------hH
Confidence 34444 378999999999999976 89999999976432211 01
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHH
Q 002927 83 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 158 (864)
Q Consensus 83 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~ 158 (864)
-.+.+|+..+.++.+ +. |.+++. ....+|||||++|.+|.+.... ...+....+.
T Consensus 50 ~~~~~E~~~l~~l~h------------------pn--Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~ 108 (323)
T 3tki_A 50 ENIKKEICINKMLNH------------------EN--VVKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQ 108 (323)
T ss_dssp -CHHHHHHHHHHCCC------------------TT--BCCEEEEEECSSEEEEEEECCTTEEGGGGSBT-TTBCCHHHHH
T ss_pred HHHHHHHHHHHhCCC------------------CC--CCeEEEEEecCCeEEEEEEcCCCCcHHHHHhh-cCCCCHHHHH
Confidence 124456655555422 11 233332 4556899999999999887542 2245666555
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 109 ~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~--~~~kl~Dfg~a~~~~ 156 (323)
T 3tki_A 109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFR 156 (323)
T ss_dssp HHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCCTTCEECE
T ss_pred HHHHHHHHHHHHHHHCCccccccchHHEEEeCC--CCEEEEEeeccceec
Confidence 5555544 888999999999999999999865 899999999997653
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.50 E-value=1.7e-14 Score=157.75 Aligned_cols=140 Identities=20% Similarity=0.241 Sum_probs=96.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+....... . .. -.+.+|.
T Consensus 12 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----~----------------~~--------------~~~~~E~ 57 (318)
T 1fot_A 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRL----K----------------QV--------------EHTNDER 57 (318)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHT----T----------------CH--------------HHHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhh----h----------------HH--------------HHHHHHH
Confidence 68999999999999986 799999999764221100 0 00 0122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+..+. ++ .|.+++. ....+|||||++|.+|.++... ...++...+...+.+++
T Consensus 58 ~~l~~l~------------------hp--~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~ 116 (318)
T 1fot_A 58 LMLSIVT------------------HP--FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK-SQRFPNPVAKFYAAEVC 116 (318)
T ss_dssp HHHHSCC------------------BT--TBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-TSSCCHHHHHHHHHHHH
T ss_pred HHHhhCC------------------CC--CCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 4333321 12 1333332 4567899999999999887542 23455555544444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|+.|++|||+||+|||++.+ |.++|+|||+++.+..
T Consensus 117 ~aL~~LH~~~ivHrDlkp~NIll~~~--g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 117 LALEYLHSKDIIYRDLKPENILLDKN--GHIKITDFGFAKYVPD 158 (318)
T ss_dssp HHHHHHHTTTEECCCCCGGGEEECTT--SCEEECCCSSCEECSS
T ss_pred HHHHHHHHCCccccCCChheEEEcCC--CCEEEeecCcceecCC
Confidence 888999999999999999999865 8999999999987653
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=2.2e-14 Score=158.81 Aligned_cols=139 Identities=16% Similarity=0.195 Sum_probs=95.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+...... + -.. . .+..|.
T Consensus 23 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~---~-----------------~~~--------~------~~~~E~ 68 (345)
T 1xjd_A 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM---D-----------------DDV--------E------CTMVEK 68 (345)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH---T-----------------TCH--------H------HHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhh---h-----------------hhH--------H------HHHHHH
Confidence 68999999999999986 79999999976421100 0 000 0 022344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ ++ .|.+++ . ....+|||||++|++|.++... ...++...+...+.+++
T Consensus 69 ~il~~~~~-----------------hp--~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~ 128 (345)
T 1xjd_A 69 RVLSLAWE-----------------HP--FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS-CHKFDLSRATFYAAEII 128 (345)
T ss_dssp HHHHHHTT-----------------CT--TBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CC--CCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 44433311 11 123333 2 4567899999999999887542 23456665555555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..|++|||+||+|||++.+ |.++|+|||+++..
T Consensus 129 ~aL~~LH~~~ivHrDlkp~NIll~~~--g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 129 LGLQFLHSKGIVYRDLKLDNILLDKD--GHIKIADFGMCKEN 168 (345)
T ss_dssp HHHHHHHHTTCBCCCCCGGGEEECTT--SCEEECCCTTCBCC
T ss_pred HHHHHHHHCCeEeCCCChhhEEECCC--CCEEEeEChhhhhc
Confidence 888999999999999999999865 89999999998764
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=99.49 E-value=2e-14 Score=159.51 Aligned_cols=140 Identities=15% Similarity=0.138 Sum_probs=97.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.++..... .. . .-.+.+|.
T Consensus 47 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~----------------~--------------~~~~~~E~ 92 (350)
T 1rdq_E 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK----LK----------------Q--------------IEHTLNEK 92 (350)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH----TT----------------C--------------HHHHHHHH
T ss_pred EEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhcc----HH----------------H--------------HHHHHHHH
Confidence 78999999999999986 79999999976321100 00 0 00123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++. ++. |.+++ . ....+|||||++|.+|.++... ...++...+...+.+++
T Consensus 93 ~~l~~l~------------------hp~--iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~ 151 (350)
T 1rdq_E 93 RILQAVN------------------FPF--LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-IGRFSEPHARFYAAQIV 151 (350)
T ss_dssp HHHTTCC------------------CTT--BCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HCCCCHHHHHHHHHHHH
T ss_pred HHHHhCC------------------CCC--CCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 4433321 121 23333 2 4567899999999999887542 23456666555555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||+|||++.+ |.++|+|||+++.+..
T Consensus 152 ~aL~~LH~~~ivHrDlkp~NIll~~~--g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 152 LTFEYLHSLDLIYRDLKPENLLIDQQ--GYIQVTDFGFAKRVKG 193 (350)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECSS
T ss_pred HHHHHHHHCCcccccCccceEEECCC--CCEEEcccccceeccC
Confidence 889999999999999999999865 8999999999987653
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=4e-14 Score=151.38 Aligned_cols=139 Identities=17% Similarity=0.214 Sum_probs=92.9
Q ss_pred cccccccceeeEEEEecC----CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLVD----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|++|.||+|+... +..||||+.+........ + .+.
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------~------~~~ 64 (281)
T 1mp8_A 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR------------------------------E------KFL 64 (281)
T ss_dssp EEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHH------------------------------H------HHH
T ss_pred eEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHH------------------------------H------HHH
Confidence 689999999999999752 457999987654322110 0 134
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---ecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 163 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~ 163 (864)
+|+..+.++.+ +. |++++ .....++||||++|.+|.++........+...+...+.+
T Consensus 65 ~e~~~l~~l~h------------------~~--iv~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~q 124 (281)
T 1mp8_A 65 QEALTMRQFDH------------------PH--IVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 124 (281)
T ss_dssp HHHHHHHTCCC------------------TT--BCCEEEEECSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHH
T ss_pred HHHHHHHhCCC------------------Cc--cceEEEEEccCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHH
Confidence 45555554422 11 23333 356678999999999999886544445676666665555
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 125 i~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 125 LSTALAYLESKRFVHRDIAARNVLVSSN--DCVKLGDFGLSRYMED 168 (281)
T ss_dssp HHHHHHHHHHTTCCCSCCSGGGEEEEET--TEEEECC---------
T ss_pred HHHHHHHHHhCCeecccccHHHEEECCC--CCEEECccccccccCc
Confidence 54 889999999999999999999965 8999999999887654
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.49 E-value=2.1e-14 Score=161.85 Aligned_cols=138 Identities=17% Similarity=0.133 Sum_probs=96.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||+.+......- .+ .-.+..|.
T Consensus 58 ~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~-~~---------------------------------~~~~~~E~ 103 (396)
T 4dc2_A 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDD-ED---------------------------------IDWVQTEK 103 (396)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC--------------------------------------CCHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCH-HH---------------------------------HHHHHHHH
Confidence 68999999999999986 789999999764321100 00 00133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++.. ++ .|.+++ . ....+|||||++|.+|.+.... ...++...+...+.+++
T Consensus 104 ~il~~~~~-----------------hp--~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~ 163 (396)
T 4dc2_A 104 HVFEQASN-----------------HP--FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEIS 163 (396)
T ss_dssp HHHHHHTT-----------------CT--TBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CC--CcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 44444321 11 122333 2 4567899999999999876542 34466665555555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+..+|..||+|||+||+|||++.+ |.++|+|||+++.
T Consensus 164 ~aL~~LH~~givHrDLKp~NILl~~~--g~ikL~DFGla~~ 202 (396)
T 4dc2_A 164 LALNYLHERGIIYRDLKLDNVLLDSE--GHIKLTDYGMCKE 202 (396)
T ss_dssp HHHHHHHHTTCBCCCCCGGGEEECTT--SCEEECCCTTCBC
T ss_pred HHHHHHHHCCEEeccCCHHHEEECCC--CCEEEeecceeee
Confidence 889999999999999999999865 8999999999875
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.48 E-value=3.6e-14 Score=163.07 Aligned_cols=141 Identities=21% Similarity=0.233 Sum_probs=101.9
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|+.++++.||||+.+++.... -+|.+|++
T Consensus 194 ~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 235 (454)
T 1qcf_A 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV--------------------------------------EAFLAEAN 235 (454)
T ss_dssp EEEECCSSEEEEEEEETTTEEEEEEEECTTSBCH--------------------------------------HHHHHHHH
T ss_pred EEcccCCceEEEEEEECCccEEEEEEecCCCccH--------------------------------------HHHHHHHH
Confidence 6799999999999999888999999987643210 01445666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHHH--HH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~~--l~ 167 (864)
.+.++++. .-+.+-.+......+|||||++|.+|.++.... ........+...+.+++ +.
T Consensus 236 ~l~~l~h~-----------------~iv~l~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~ 298 (454)
T 1qcf_A 236 VMKTLQHD-----------------KLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 298 (454)
T ss_dssp HHTTCCCT-----------------TBCCEEEEECSSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred HHhhCCCC-----------------CEeeEEEEEeCCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHH
Confidence 65554321 012222222256678999999999999886532 22455556555555544 88
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
.+|..|++|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 299 ~LH~~~ivHrDlkp~Nill~~~--~~~kl~DFG~a~~~~~~ 337 (454)
T 1qcf_A 299 FIEQRNYIHRDLRAANILVSAS--LVCKIADFGLARVIEDN 337 (454)
T ss_dssp HHHHTTCCCSSCSGGGEEECTT--CCEEECSTTGGGGBCCH
T ss_pred HHHhCCccCCCCCHHHEEECCC--CcEEEeeCCCceEcCCC
Confidence 8999999999999999999865 89999999999887653
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=3e-14 Score=157.68 Aligned_cols=139 Identities=17% Similarity=0.131 Sum_probs=95.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+......- .+. + .+.+|.
T Consensus 15 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~~---------------------------~------~~~~E~ 60 (345)
T 3a8x_A 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-EDI---------------------------D------WVQTEK 60 (345)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSH-HHH---------------------------H------HHHHHH
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcch-HHH---------------------------H------HHHHHH
Confidence 78999999999999986 799999999864321000 000 0 022344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ ++. |.+++ . ....+|||||++|.+|.+.... ...+....+...+.+++
T Consensus 61 ~~l~~~~~-----------------hp~--iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~ 120 (345)
T 3a8x_A 61 HVFEQASN-----------------HPF--LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEIS 120 (345)
T ss_dssp HHHHHTTT-----------------CTT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-HSSCCHHHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCc--cCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 44333211 111 23333 2 4567899999999999877542 23456655555555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..|++|||+||+|||++.+ |.++|+|||+++..
T Consensus 121 ~aL~~LH~~~ivHrDlkp~NIll~~~--g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 121 LALNYLHERGIIYRDLKLDNVLLDSE--GHIKLTDYGMCKEG 160 (345)
T ss_dssp HHHHHHHHTTCBCCCCCGGGEEECTT--SCEEECCGGGCBCS
T ss_pred HHHHHHHHCCceecCCCHHHEEECCC--CCEEEEeccccccc
Confidence 888999999999999999999865 89999999998753
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.48 E-value=5.2e-14 Score=150.16 Aligned_cols=140 Identities=20% Similarity=0.222 Sum_probs=100.3
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|+..+++.||||+.+.+.... -.+.+|++
T Consensus 19 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 60 (279)
T 1qpc_A 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP--------------------------------------DAFLAEAN 60 (279)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTSSCH--------------------------------------HHHHHHHH
T ss_pred eeecCCCCeEEEEEEEcCCcEEEEEEecCCcccH--------------------------------------HHHHHHHH
Confidence 6799999999999998888899999877542110 01344666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--HH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~--l~ 167 (864)
.+.++.+. .-+.+-.++.....++||||++|.+|.++..... ...+...+...+.+++ +.
T Consensus 61 ~l~~l~h~-----------------~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~ 123 (279)
T 1qpc_A 61 LMKQLQHQ-----------------RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123 (279)
T ss_dssp HHHHCCCT-----------------TBCCEEEEECSSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCc-----------------CcceEEEEEcCCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHH
Confidence 65554321 0112222223566889999999999988754221 2466666666555554 88
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 124 ~lH~~~i~H~dikp~Nil~~~~--~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 124 FIEERNYIHRDLRAANILVSDT--LSCKIADFGLARLIED 161 (279)
T ss_dssp HHHHTTEECSCCSGGGEEECTT--SCEEECCCTTCEECSS
T ss_pred HHHHCCeeccCCCHhhEEEcCC--CCEEECCCcccccccC
Confidence 8999999999999999999865 8999999999987643
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.4e-14 Score=160.85 Aligned_cols=139 Identities=14% Similarity=0.115 Sum_probs=94.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+...... + -.. -.+..|.
T Consensus 26 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~---~-----------------~~~--------------~~~~~E~ 71 (353)
T 2i0e_A 26 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ---D-----------------DDV--------------ECTMVEK 71 (353)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHH---T-----------------TCH--------------HHHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhc---c-----------------hHH--------------HHHHHHH
Confidence 68999999999999987 68999999976421100 0 000 0022233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+..+. .++ .|++++. ....+|||||++|++|.++... ...++...+...+.+++
T Consensus 72 ~~l~~~~-----------------~hp--~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~ 131 (353)
T 2i0e_A 72 RVLALPG-----------------KPP--FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-VGRFKEPHAVFYAAEIA 131 (353)
T ss_dssp HHHTCTT-----------------CCT--TBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHH
T ss_pred HHHHhcC-----------------CCC--EEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHH
Confidence 3322210 112 2333332 4567899999999999887542 23466666555555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..|++|||+||+|||++.+ |.++|+|||+++..
T Consensus 132 ~aL~~LH~~givHrDlkp~NIll~~~--g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 132 IGLFFLQSKGIIYRDLKLDNVMLDSE--GHIKIADFGMCKEN 171 (353)
T ss_dssp HHHHHHHHTTCBCCCCCGGGEEECTT--SCEEECCCTTCBCC
T ss_pred HHHHHHHHCCEEeccCCHHHEEEcCC--CcEEEEeCCccccc
Confidence 888999999999999999999865 89999999998764
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=3e-14 Score=156.32 Aligned_cols=136 Identities=16% Similarity=0.235 Sum_probs=99.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+...... .-.+.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------------------------------------~~~~~~E~ 55 (330)
T 2izr_A 15 KKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR---------------------------------------APQLHLEY 55 (330)
T ss_dssp EECCC-CTTSEEEEEETTTTEEEEEEEEETTCS---------------------------------------SCCHHHHH
T ss_pred EEeeccCCceEEEEEECCCCcEEEEEEeccccc---------------------------------------hHHHHHHH
Confidence 68999999999999975 899999998653210 11255677
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ ++ .|++++ . ....+|||||+ |.+|.++.......++...+...+.+++
T Consensus 56 ~~l~~l~~-----------------h~--~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~ 115 (330)
T 2izr_A 56 RFYKQLGS-----------------GD--GIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLI 115 (330)
T ss_dssp HHHHHHCS-----------------CT--TSCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHhhC-----------------CC--CCCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 66666621 11 133333 2 45568999999 9999988654445677776666666655
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCc-----eEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHR-----PILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~-----i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||.|||++.+ +. ++|+|||++..+..
T Consensus 116 ~~l~~LH~~~iiHrDlkp~Nill~~~--~~~~~~~~kl~DFg~a~~~~~ 162 (330)
T 2izr_A 116 SRMEYVHSKNLIYRDVKPENFLIGRP--GNKTQQVIHIIDFALAKEYID 162 (330)
T ss_dssp HHHHHHHHTTEECCCCCGGGEEECCG--GGTCTTSEEECCCTTCEESBC
T ss_pred HHHHHHHhCCeeccCCCHHHeeeccC--CCCCCceEEEEEcccceeeec
Confidence 889999999999999999999865 54 99999999986543
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=4.7e-14 Score=152.18 Aligned_cols=142 Identities=20% Similarity=0.211 Sum_probs=98.2
Q ss_pred cccccccceeeEEEEe-----cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l-----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||+|++|.||+|+. .+|+.||||+.++...... .-++
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~~ 70 (302)
T 4e5w_A 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH------------------------------------IADL 70 (302)
T ss_dssp EEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CC------------------------------------HHHH
T ss_pred hccCCCCceEEEEEEEccccCccCeEEEEEEecccccchh------------------------------------HHHH
Confidence 6799999999999993 3789999999875422100 0013
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-c--CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
.+|++.+.++++. .-+.+-.++. . ...++||||++|.+|.++........+...+...+.
T Consensus 71 ~~E~~~l~~l~h~-----------------~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 133 (302)
T 4e5w_A 71 KKEIEILRNLYHE-----------------NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAV 133 (302)
T ss_dssp HHHHHHHHTCCCT-----------------TBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCC-----------------CeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHH
Confidence 3455555544221 0111222222 2 446899999999999998754445567766666665
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++..+..
T Consensus 134 ~i~~~l~~lH~~~i~H~dikp~Nil~~~~--~~~kl~Dfg~~~~~~~ 178 (302)
T 4e5w_A 134 QICKGMDYLGSRQYVHRDLAARNVLVESE--HQVKIGDFGLTKAIET 178 (302)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEEEET--TEEEECCCTTCEECCT
T ss_pred HHHHHHHHhhcCCcccCCCchheEEEcCC--CCEEECcccccccccC
Confidence 554 889999999999999999999865 8999999999876543
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=4.7e-14 Score=151.77 Aligned_cols=138 Identities=19% Similarity=0.308 Sum_probs=99.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.+.... .-.+.+|.
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------------------------------------~~~~~~e~ 56 (298)
T 1csn_A 16 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD---------------------------------------APQLRDEY 56 (298)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEECCTT---------------------------------------SCCHHHHH
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeccCCc---------------------------------------cHHHHHHH
Confidence 68999999999999964 899999998653211 11244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+. ..+|.++. ....+|||||+ |.+|.++.......++...+...+.+++
T Consensus 57 ~~~~~l~~~-------------------~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~ 116 (298)
T 1csn_A 57 RTYKLLAGC-------------------TGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQML 116 (298)
T ss_dssp HHHHHTTTC-------------------TTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHhcC-------------------CCCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHH
Confidence 665555321 11333332 55678999999 9999988654444467776666666655
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCC---CCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDP---PHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~---~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.||+++.++ .+.++|+|||++..+..
T Consensus 117 ~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~ 163 (298)
T 1csn_A 117 ARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 163 (298)
T ss_dssp HHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred HHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccc
Confidence 8889999999999999999998541 13399999999986653
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.47 E-value=8.2e-14 Score=149.96 Aligned_cols=137 Identities=13% Similarity=0.046 Sum_probs=96.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.. +|+.||||+.++.....- +.. -.|.+|+
T Consensus 37 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~----------------------------~~~------~~~~~e~ 82 (286)
T 3uqc_A 37 IFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPD----------------------------DVL------QETLSRT 82 (286)
T ss_dssp EEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCH----------------------------HHH------HHHHHHH
T ss_pred EEEcccCCeEEEEEEecCCCceEEEEEECcccccCH----------------------------HHH------HHHHHHH
Confidence 68999999999999986 699999999876532100 000 0134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++. +++ |++++. ....+|||||++|.+|.++.. .+....++.+.+.+++
T Consensus 83 ~~l~~l~------------------hp~--iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~---~~~~~~~~~~i~~ql~ 139 (286)
T 3uqc_A 83 LRLSRID------------------KPG--VARVLDVVHTRAGGLVVAEWIRGGSLQEVAD---TSPSPVGAIRAMQSLA 139 (286)
T ss_dssp HHHHTCC------------------CTT--BCCEEEEEEETTEEEEEEECCCEEEHHHHHT---TCCCHHHHHHHHHHHH
T ss_pred HHHhcCC------------------CCC--cceeeEEEEECCcEEEEEEecCCCCHHHHHh---cCCChHHHHHHHHHHH
Confidence 5544432 122 334432 456789999999999988753 2345555555555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|+.|++|||+||+|||++.+ |.++|.++|.+...+
T Consensus 140 ~aL~~lH~~givH~Dikp~NIll~~~--g~~kl~~~~~~~~~~ 180 (286)
T 3uqc_A 140 AAADAAHRAGVALSIDHPSRVRVSID--GDVVLAYPATMPDAN 180 (286)
T ss_dssp HHHHHHHHTTCCCCCCSGGGEEEETT--SCEEECSCCCCTTCC
T ss_pred HHHHHHHHCCCccCCCCcccEEEcCC--CCEEEEeccccCCCC
Confidence 889999999999999999999965 889999888776544
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.47 E-value=3.2e-14 Score=159.69 Aligned_cols=145 Identities=12% Similarity=0.128 Sum_probs=99.8
Q ss_pred cccc-ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 6 MDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 6 ~~fd-~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
..|. .+.||+|++|.||+|+.+ +|+.||||+.+...... .-.. -
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~--------------------~~~~--------------~ 60 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVE--------------------RNEV--------------R 60 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHH--------------------TTCH--------------H
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhccc--------------------HHHH--------------H
Confidence 4444 378999999999999976 79999999875311000 0000 0
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHH
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 159 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~ 159 (864)
.+.+|++.+.++.+ + .|.+++ . ....++||||++|.+|.++.. ....++...+..
T Consensus 61 ~~~~E~~il~~l~h------------------p--~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~l~~~~~~~ 119 (384)
T 4fr4_A 61 NVFKELQIMQGLEH------------------P--FLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ-QNVHFKEETVKL 119 (384)
T ss_dssp HHHHHHHHHHTCCC------------------T--TBCCEEEEEECSSEEEEEECCCTTEEHHHHHH-TTCCCCHHHHHH
T ss_pred HHHHHHHHHHhCCC------------------C--CCCcEEEEEEeCCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHH
Confidence 13345555544422 1 122333 2 456789999999999987754 223456665555
Q ss_pred HHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 160 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 160 ~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+.+++ +..+|..|++|||+||+|||++.+ |.++|+|||++..+..
T Consensus 120 ~~~qi~~aL~~LH~~givHrDlkp~NIll~~~--g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 120 FICELVMALDYLQNQRIIHRDMKPDNILLDEH--GHVHITDFNIAAMLPR 167 (384)
T ss_dssp HHHHHHHHHHHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECCT
T ss_pred HHHHHHHHHHHHHHCCceeccCcHHHeEECCC--CCEEEeccceeeeccC
Confidence 555544 888999999999999999999865 8999999999987653
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.47 E-value=7.8e-14 Score=151.75 Aligned_cols=143 Identities=18% Similarity=0.156 Sum_probs=94.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+........ +..+..|.
T Consensus 63 ~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-----------------------------------~~~~~~e~ 107 (311)
T 3p1a_A 63 SRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKD-----------------------------------RARKLAEV 107 (311)
T ss_dssp EEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHH-----------------------------------HHHHHHHH
T ss_pred heeccCCCeEEEEEEECCCCeEEEEEEecccccChHH-----------------------------------HHHHHHHH
Confidence 46999999999999987 8999999987643321100 00112233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+.+.. . ++. +.+-..+. ....+|||||+. .+|.+........++...+...+.+++
T Consensus 108 ~~~~~~~---~--------------h~~iv~l~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~a 169 (311)
T 3p1a_A 108 GSHEKVG---Q--------------HPCCVRLEQAWEEGGILYLQTELCG-PSLQQHCEAWGASLPEAQVWGYLRDTLLA 169 (311)
T ss_dssp HHHHHHC---C--------------CTTBCCEEEEEEETTEEEEEEECCC-CBHHHHHHHHCSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhc---C--------------CCcEEEEEEEEEeCCEEEEEEeccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 3332221 1 111 11222222 556789999995 466665443334466666665555554
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|+.|++|+|+||+|||++.+ +.++|+|||++..+...
T Consensus 170 L~~LH~~~ivH~Dikp~NIll~~~--~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 170 LAHLHSQGLVHLDVKPANIFLGPR--GRCKLGDFGLLVELGTA 210 (311)
T ss_dssp HHHHHHTTEECCCCSGGGEEECGG--GCEEECCCTTCEECC--
T ss_pred HHHHHHCCEecCCCCHHHEEECCC--CCEEEccceeeeecccC
Confidence 888999999999999999999865 89999999998877643
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=99.47 E-value=6.5e-14 Score=155.95 Aligned_cols=138 Identities=18% Similarity=0.149 Sum_probs=96.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+.+.... -.+.+|+
T Consensus 26 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~ 67 (361)
T 3uc3_A 26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID--------------------------------------ENVQREI 67 (361)
T ss_dssp EEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSC--------------------------------------HHHHHHH
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEecCcccc--------------------------------------HHHHHHH
Confidence 67999999999999987 89999999876432100 0123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++++. .-+.+-.++. ....+|||||++|.+|.+... ....+....+...+.+++ +
T Consensus 68 ~~l~~l~hp-----------------niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~ql~~~L 129 (361)
T 3uc3_A 68 INHRSLRHP-----------------NIVRFKEVILTPTHLAIIMEYASGGELYERIC-NAGRFSEDEARFFFQQLLSGV 129 (361)
T ss_dssp HHHHHCCCT-----------------TBCCEEEEEECSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCC-----------------CCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 555544221 0122223333 456789999999999987754 234466666666555554 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
..+|..|++|||+||.||+++.+..++++|+|||+++.
T Consensus 130 ~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~ 167 (361)
T 3uc3_A 130 SYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKS 167 (361)
T ss_dssp HHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred HHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence 88999999999999999999865445699999999864
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.47 E-value=8.1e-14 Score=149.47 Aligned_cols=141 Identities=21% Similarity=0.241 Sum_probs=100.3
Q ss_pred cccccccceeeEEEEec---CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 11 TPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 11 ~plasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
+.||+|++|+||+|+.+ +|+.||||+.++........ .+.+
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~------------------------------------~~~~ 59 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE------------------------------------EMMR 59 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHH------------------------------------HHHH
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHH------------------------------------HHHH
Confidence 48999999999999864 68889999988653221100 1344
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
|++.+.++.+. .-+.+-.++.....++||||++|.+|.++.......++...+...+.+++
T Consensus 60 E~~~l~~l~h~-----------------~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~ 122 (287)
T 1u59_A 60 EAQIMHQLDNP-----------------YIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG 122 (287)
T ss_dssp HHHHHHHCCCT-----------------TBCCEEEEEESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCC-----------------CEeEEEEEecCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHH
Confidence 66555554221 01112222235668899999999999887543334466666666665554
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 123 l~~lH~~~i~H~dlkp~Nili~~~--~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 123 MKYLEEKNFVHRDLAARNVLLVNR--HYAKISDFGLSKALG 161 (287)
T ss_dssp HHHHHHTTEECCCCSGGGEEEEET--TEEEECCCTTCEECT
T ss_pred HHHHHHCCEeeCCCchheEEEcCC--CCEEECcccceeeec
Confidence 888999999999999999999965 899999999998764
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=7.3e-14 Score=147.73 Aligned_cols=137 Identities=18% Similarity=0.187 Sum_probs=101.6
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|+..+++.||||+.++..... -++.+|++
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~--------------------------------------~~~~~e~~ 55 (267)
T 3t9t_A 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--------------------------------------EDFIEEAE 55 (267)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTTBCH--------------------------------------HHHHHHHH
T ss_pred eEecCCCceeEEEEEecCCCeEEEEEccccCCCH--------------------------------------HHHHHHHH
Confidence 6799999999999998889999999987543210 01334555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.+.++.+ + .|++++. ....+++|||++|.+|.++........+...+...+.+++
T Consensus 56 ~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~ 115 (267)
T 3t9t_A 56 VMMKLSH------------------P--KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 115 (267)
T ss_dssp HHHTCCC------------------T--TBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHH
T ss_pred HHHhCCC------------------C--CEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHH
Confidence 5544421 1 1233332 4568899999999999988654434466666666655554
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||++.....
T Consensus 116 ~l~~lH~~~i~H~dl~p~Nili~~~--~~~kl~dfg~~~~~~~ 156 (267)
T 3t9t_A 116 GMAYLEEACVIHRDLAARNCLVGEN--QVIKVSDFGMTRFVLD 156 (267)
T ss_dssp HHHHHHHTTCCCSSCCGGGEEECGG--GCEEECCTTGGGGBCC
T ss_pred HHHHHHhCCcccCCCchheEEECCC--CCEEEccccccccccc
Confidence 888999999999999999999865 8999999999987754
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.47 E-value=5.9e-14 Score=154.30 Aligned_cols=139 Identities=18% Similarity=0.171 Sum_probs=98.9
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||+|++|.||+|+.. +++.||||+.++....... -.
T Consensus 53 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~ 96 (343)
T 1luf_A 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ------------------------------------AD 96 (343)
T ss_dssp EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHH------------------------------------HH
T ss_pred eeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHH------------------------------------HH
Confidence 67999999999999974 3589999998765432111 01
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh-----------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA----------- 149 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~----------- 149 (864)
+.+|++.+.++++ + .|++++. ....+|||||++|.+|.++.....
T Consensus 97 ~~~E~~~l~~l~h------------------p--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 156 (343)
T 1luf_A 97 FQREAALMAEFDN------------------P--NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSD 156 (343)
T ss_dssp HHHHHHHHHTCCC------------------T--TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------
T ss_pred HHHHHHHHHhCCC------------------C--CEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCccccccccccc
Confidence 4456666555422 1 1333332 466799999999999998764321
Q ss_pred ------------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 150 ------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 150 ------------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..++...+...+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 157 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~--~~~kl~Dfg~~~~~~~ 226 (343)
T 1luf_A 157 LSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGEN--MVVKIADFGLSRNIYS 226 (343)
T ss_dssp ------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG--GCEEECCCSCHHHHTG
T ss_pred ccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCC--CeEEEeecCCCccccc
Confidence 2345555555555544 888999999999999999999865 8999999999876543
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.46 E-value=6.5e-14 Score=155.09 Aligned_cols=147 Identities=11% Similarity=0.142 Sum_probs=101.6
Q ss_pred cccccccceeeEEEEecC---------CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 11 TPLATASIAQVHRATLVD---------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~---------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
+.||+|++|.||+|+... |+.||||+.+.. +.+..++++++.+.
T Consensus 48 ~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--~~~~~E~~~l~~l~------------------------- 100 (352)
T 2jii_A 48 SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--GRLFNEQNFFQRAA------------------------- 100 (352)
T ss_dssp EEEEEETTEEEEEEEECC-----------CEEEEEEETT--STHHHHHHHHHHHC-------------------------
T ss_pred EEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--chHHHHHHHHHHhc-------------------------
Confidence 689999999999999763 899999998754 23333444333221
Q ss_pred hccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-----cCCceEEEeecCCcCCCChHHHh-hcCCCHH
Q 002927 82 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLE-AFGVNKQ 155 (864)
Q Consensus 82 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~ 155 (864)
-.|+.++...+. ..+...+|+++. ....+|||||+ |.+|.++.... ...++..
T Consensus 101 -------h~niv~~~~~~~-------------~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~ 159 (352)
T 2jii_A 101 -------KPLQVNKWKKLY-------------STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSER 159 (352)
T ss_dssp -------CHHHHHHHHHHT-------------TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHH
T ss_pred -------ccchhhhhhhhc-------------cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHH
Confidence 113333333232 122344555543 34568999999 99999886532 2456777
Q ss_pred HHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCC--ceEEEecccccccCh
Q 002927 156 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLDFGLTKKLSS 207 (864)
Q Consensus 156 ~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g--~i~LiDFG~~~~l~~ 207 (864)
.+...+.+++ +..+|..|++|+|+||.||+++.+ + +++|+|||++..+..
T Consensus 160 ~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~--~~~~~kl~Dfg~a~~~~~ 213 (352)
T 2jii_A 160 SVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPE--DQSQVTLAGYGFAFRYCP 213 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETT--EEEEEEECCGGGCBCSSG
T ss_pred HHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCC--CCceEEEecCcceeeccC
Confidence 7766666655 888999999999999999999865 5 899999999987664
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=1.7e-13 Score=146.46 Aligned_cols=143 Identities=17% Similarity=0.091 Sum_probs=100.8
Q ss_pred ccccccccceeeEEEEecC----CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 10 ETPLATASIAQVHRATLVD----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
.+.||+|++|+||+|+..+ ++.||||+.++....... -.+
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~~ 60 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK------------------------------------EKF 60 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHH------------------------------------HHH
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHH------------------------------------HHH
Confidence 3789999999999999642 346999998765321100 114
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
.+|++.+.++.+.. -+.+-.++.....+++|||++|.+|.++........+...+...+.+++
T Consensus 61 ~~E~~~l~~l~h~~-----------------i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~ 123 (281)
T 3cc6_A 61 MSEAVIMKNLDHPH-----------------IVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQIC 123 (281)
T ss_dssp HHHHHHHHHHCCTT-----------------BCCEEEEECSSSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCC-----------------cceEEEEEcCCCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHH
Confidence 45666666663210 1122222335667899999999999988654444466666666555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 124 ~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 124 KAMAYLESINCVHRDIAVRNILVASP--ECVKLGDFGLSRYIED 165 (281)
T ss_dssp HHHHHHHHTTCCCCCCSGGGEEEEET--TEEEECCCCGGGCC--
T ss_pred HHHHHHHHCCcccCCCccceEEECCC--CcEEeCccCCCccccc
Confidence 888999999999999999999865 8999999999987654
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.46 E-value=9.5e-14 Score=150.56 Aligned_cols=142 Identities=19% Similarity=0.194 Sum_probs=97.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.......... .+ .+.+|+
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------------------~~------~~~~E~ 53 (311)
T 4agu_A 9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVI-----------------------------KK------IALREI 53 (311)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHH-----------------------------HH------HHHHHH
T ss_pred eEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHH-----------------------------HH------HHHHHH
Confidence 67999999999999986 6999999987544321100 00 133456
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++++. .-+.+-.++. ....++||||++|.++.++.. ...+.+...+...+.+++ +
T Consensus 54 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~i~~~l~~~l 115 (311)
T 4agu_A 54 RMLKQLKHP-----------------NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDR-YQRGVPEHLVKSITWQTLQAV 115 (311)
T ss_dssp HHHHHCCCT-----------------TBCCEEEEEEETTEEEEEEECCSEEHHHHHHH-TSSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCC-----------------CccchhheeecCCeEEEEEEeCCCchHHHHHh-hhcCCCHHHHHHHHHHHHHHH
Confidence 555554321 0111222222 456789999999988877643 223456555555554444 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|+.|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 116 ~~lH~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 116 NFCHKHNCIHRDVKPENILITKH--SVIKLCDFGFARLLTG 154 (311)
T ss_dssp HHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECC-
T ss_pred HHHHHCCCcCCCCChhhEEEcCC--CCEEEeeCCCchhccC
Confidence 88999999999999999999865 8999999999987764
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=99.46 E-value=1.7e-13 Score=149.95 Aligned_cols=135 Identities=16% Similarity=0.259 Sum_probs=95.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.++...+.+ .+|+
T Consensus 42 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~E~ 81 (330)
T 3nsz_A 42 RKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKI----------------------------------------KREI 81 (330)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHH----------------------------------------HHHH
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEecccchHHH----------------------------------------HHHH
Confidence 67999999999999975 899999999886554332 3345
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++++ ++. +.+-.++. ....+|||||++|.+|.++.. ......+...+.+++
T Consensus 82 ~~l~~l~~-----------------~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~qi~ 140 (330)
T 3nsz_A 82 KILENLRG-----------------GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEIL 140 (330)
T ss_dssp HHHHHHTT-----------------STTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGG----GCCHHHHHHHHHHHH
T ss_pred HHHHHcCC-----------------CCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHH----hCCHHHHHHHHHHHH
Confidence 55555431 111 22222222 344689999999998877642 245555555554444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||+|||++.+ ++.++|+|||++..+..
T Consensus 141 ~~l~~lH~~~ivH~Dikp~Nil~~~~-~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 141 KALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEEETT-TTEEEECCCTTCEECCT
T ss_pred HHHHHHHhCCeeeCCCCHHHEEEcCC-CCEEEEEeCCCceEcCC
Confidence 888999999999999999999865 24899999999986653
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.46 E-value=3.5e-14 Score=163.83 Aligned_cols=142 Identities=18% Similarity=0.258 Sum_probs=98.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.. +|+.||||+.++..... .. ..-.+.+|+
T Consensus 22 ~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~----~~------------------------------~~~~~~~Ei 67 (476)
T 2y94_A 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRS----LD------------------------------VVGKIRREI 67 (476)
T ss_dssp EEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHH----TT------------------------------THHHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC----HH------------------------------HHHHHHHHH
Confidence 78999999999999986 89999999976421100 00 000134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+..+++ +. +.+-.++. ....+|||||++|.+|.++.. ....++...+...+.+++
T Consensus 68 ~~l~~l~H------------------pnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~l~~~~~~~i~~qi~~a 128 (476)
T 2y94_A 68 QNLKLFRH------------------PHIIKLYQVISTPSDIFMVMEYVSGGELFDYIC-KNGRLDEKESRRLFQQILSG 128 (476)
T ss_dssp HHHTTCCC------------------TTBCCEEEEEECSSEEEEEEECCSSEEHHHHTT-SSSSCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------CCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHH
Confidence 55544322 11 12222232 456789999999999988753 223456665555555544
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||+||+++.+ +.++|+|||++..+..
T Consensus 129 L~~LH~~givHrDLkp~NIll~~~--~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 129 VDYCHRHMVVHRDLKPENVLLDAH--MNAKIADFGLSNMMSD 168 (476)
T ss_dssp HHHHHTTTEECSCCSGGGEEECTT--CCEEECCCSSCEECCT
T ss_pred HHHHHHCCCCcccccHHHEEEecC--CCeEEEeccchhhccc
Confidence 888999999999999999999865 8999999999987654
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=99.46 E-value=5.6e-14 Score=151.16 Aligned_cols=141 Identities=14% Similarity=0.092 Sum_probs=94.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+......- .. -.+.+|+
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------~~------~~~~~E~ 52 (292)
T 3o0g_A 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEG-----------------------------VP------SSALREI 52 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTT-----------------------------HH------HHHHHHH
T ss_pred eEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCC-----------------------------cc------hHHHHHH
Confidence 67999999999999986 799999999764321100 00 0123355
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++++. .-+.+-.++. ....+|||||++|..+..+ ......++...+...+.+++ +
T Consensus 53 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~-~~~~~~l~~~~~~~~~~ql~~~l 114 (292)
T 3o0g_A 53 CLLKELKHK-----------------NIVRLHDVLHSDKKLTLVFEFCDQDLKKYF-DSCNGDLDPEIVKSFLFQLLKGL 114 (292)
T ss_dssp HHHTTCCCT-----------------TBCCEEEEEEETTEEEEEEECCSEEHHHHH-HHTTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCC-----------------CEeeEEeEEEeCCEEEEEEecCCCCHHHHH-HhCCCCCCHHHHHHHHHHHHHHH
Confidence 444443221 0122222333 5567899999997444332 22234466666555555544 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+|+.|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 115 ~~lH~~~ivH~dikp~Nil~~~~--~~~kl~Dfg~~~~~~ 152 (292)
T 3o0g_A 115 GFCHSRNVLHRDLKPQNLLINRN--GELKLANFGLARAFG 152 (292)
T ss_dssp HHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECC
T ss_pred HHHHhCCeecCCCCHHHEEEcCC--CCEEEeecccceecC
Confidence 88999999999999999999865 899999999997664
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.46 E-value=8.8e-14 Score=151.67 Aligned_cols=144 Identities=19% Similarity=0.173 Sum_probs=97.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+...... .. -.+.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----------------------~~--------------~~~~~E~ 58 (319)
T 4euu_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR----------------------PV--------------DVQMREF 58 (319)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS----------------------CH--------------HHHHHHH
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEeccccccc----------------------hH--------------HHHHHHH
Confidence 67999999999999986 69999999976422100 00 0123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-c--CCceEEEeecCCcCCCChHHHhhc--CCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAF--GVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLvmE~i~G~~L~~~~~~~~~--~~~~~~l~~~~~~~ 164 (864)
+.+.++++. .-+.+-.++. . ...+|||||++|.+|.++...... .++...+...+.++
T Consensus 59 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi 121 (319)
T 4euu_A 59 EVLKKLNHK-----------------NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV 121 (319)
T ss_dssp HHHHHCCCT-----------------TBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHH
T ss_pred HHHHhcCCC-----------------CcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHH
Confidence 555554321 0111222222 2 255899999999999887653222 26666666665555
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEcc--CCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSK--DPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~--~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+|+.|++|+|+||.|||+.. +.++.++|+|||++..+..
T Consensus 122 ~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~ 168 (319)
T 4euu_A 122 VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (319)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred HHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence 4 88999999999999999999821 1236799999999987754
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.46 E-value=4.6e-14 Score=150.47 Aligned_cols=148 Identities=19% Similarity=0.197 Sum_probs=101.4
Q ss_pred cccccc-ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 4 MFMDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 4 ~F~~fd-~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
.+..|. .+.||+|++|.||+|+.. +|+.||||+.++..... .. .
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~----~~------------------------~------ 54 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK----AG------------------------M------ 54 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH----TT------------------------C------
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhh----hh------------------------H------
Confidence 445554 378999999999999975 89999999875321100 00 0
Q ss_pred hccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHH
Q 002927 82 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKV 157 (864)
Q Consensus 82 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l 157 (864)
.-.+.+|++.+.++++ + .|++++ . ....+|||||++|.+|.++.......++...+
T Consensus 55 ~~~~~~e~~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 114 (278)
T 3cok_A 55 VQRVQNEVKIHCQLKH------------------P--SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEA 114 (278)
T ss_dssp HHHHHHHHHHHTTBCC------------------T--TBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHH
T ss_pred HHHHHHHHHHHHhCCC------------------C--CeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccCCCCHHHH
Confidence 0113345544443321 1 123333 2 45578999999999998875433344566666
Q ss_pred HHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 158 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 158 ~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
...+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 115 ~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~--~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 115 RHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRN--MNIKIADFGLATQLKM 164 (278)
T ss_dssp HHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTT--CCEEECCCTTCEECC-
T ss_pred HHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC--CCEEEEeecceeeccC
Confidence 66555554 888999999999999999999865 8999999999987764
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.4e-13 Score=157.60 Aligned_cols=143 Identities=17% Similarity=0.224 Sum_probs=98.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||+|+........ .+. -.+.+|+
T Consensus 17 ~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~--~~~---------------------------------~~~~~E~ 61 (444)
T 3soa_A 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSA--RDH---------------------------------QKLEREA 61 (444)
T ss_dssp EEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHH--HHH---------------------------------HHHHHHH
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCH--HHH---------------------------------HHHHHHH
Confidence 67999999999999975 89999999976543211 010 0134566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.+ ++ +.+-.++. ....+|||||++|.+|.+... ....+....+...+.+++
T Consensus 62 ~il~~l~h------------------pnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~-~~~~~~e~~~~~i~~qil~a 122 (444)
T 3soa_A 62 RICRLLKH------------------PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIV-AREYYSEADASHCIQQILEA 122 (444)
T ss_dssp HHHHHCCB------------------TTBCCEEEEEECSSEEEEEECCCBCCBHHHHHH-HCSCCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------cCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 66655422 11 22223333 556789999999999977654 233456666655555554
Q ss_pred HHHHHhcCeeccCCCCCCeEEccC-CCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||+|||++.+ .++.++|+|||++..+..
T Consensus 123 L~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 123 VLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp HHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred HHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 888999999999999999999853 247899999999977654
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.46 E-value=6.7e-14 Score=160.71 Aligned_cols=140 Identities=18% Similarity=0.189 Sum_probs=99.8
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|+.+++..||||+.+++.... -+|.+|++
T Consensus 190 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 231 (452)
T 1fmk_A 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--------------------------------------EAFLQEAQ 231 (452)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEECCTTSSCH--------------------------------------HHHHHHHH
T ss_pred eeecCCCCeEEEEEEECCCceEEEEEeccCCCCH--------------------------------------HHHHHHHH
Confidence 5799999999999999877889999987643210 02456777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--HH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~--l~ 167 (864)
.+.++++.. -+.+-.+......+|||||++|.+|.++..... ..++...+...+.+++ +.
T Consensus 232 ~l~~l~hp~-----------------iv~~~~~~~~~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~ 294 (452)
T 1fmk_A 232 VMKKLRHEK-----------------LVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294 (452)
T ss_dssp HHHHCCCTT-----------------BCCEEEEECSSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCC-----------------EeeEEEEEcCCceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 766653310 111112222456789999999999998865322 3366666666655554 88
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+|..|++|||+||.|||++.+ +.++|+|||++..+..
T Consensus 295 ~LH~~~ivHrDlkp~Nill~~~--~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 295 YVERMNYVHRDLRAANILVGEN--LVCKVADFGLARLIED 332 (452)
T ss_dssp HHHHTTCCCSCCSGGGEEECGG--GCEEECCCCTTC----
T ss_pred HHHhCCeeCCCCChhhEEECCC--CCEEECCCccceecCC
Confidence 8999999999999999999865 8999999999987654
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=4.1e-14 Score=154.61 Aligned_cols=138 Identities=19% Similarity=0.242 Sum_probs=96.6
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|+.++|+.||||+.+...... .+..+.+|++
T Consensus 36 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~~~e~~ 79 (326)
T 3uim_A 36 NILGRGGFGKVYKGRLADGTLVAVKRLKEERTQG------------------------------------GELQFQTEVE 79 (326)
T ss_dssp TEEECCSSSEEEEECCSSSCCEEEEECCC-----------------------------------------CCCHHHHHHH
T ss_pred eeEecCCCcEEEEEEecCCCEEEEEEeccccCch------------------------------------HHHHHHHHHH
Confidence 6899999999999998889999999876532210 1123455655
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh---cCCCHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEITR 163 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~---~~~~~~~l~~~~~~ 163 (864)
.+.++.+ + .|++++ . ....++||||++|.+|.++..... ..++...+...+.+
T Consensus 80 ~l~~l~h------------------~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~ 139 (326)
T 3uim_A 80 MISMAVH------------------R--NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139 (326)
T ss_dssp GGGTCCC------------------T--TBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHH
T ss_pred HHHhccC------------------C--CccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHH
Confidence 4444321 1 122332 2 566789999999999988754221 12455555555444
Q ss_pred HH--HHHHHhc---CeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 164 AY--AHQIYVD---GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 164 ~~--l~~i~~~---G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
++ +..+|.. |++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 140 i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~--~~~kl~Dfg~~~~~~ 185 (326)
T 3uim_A 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEE--FEAVVGDFGLAKLMD 185 (326)
T ss_dssp HHHHHHHHHHSSSSCEECCCCSGGGEEECTT--CCEEECCCSSCEECC
T ss_pred HHHHHHHHHhCCCCCeEeCCCchhhEEECCC--CCEEeccCccccccC
Confidence 43 8889999 99999999999999865 899999999997654
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.6e-13 Score=153.94 Aligned_cols=139 Identities=19% Similarity=0.235 Sum_probs=99.1
Q ss_pred cccccccceeeEEEEec--------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhh
Q 002927 11 TPLATASIAQVHRATLV--------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 82 (864)
Q Consensus 11 ~plasaSigqV~~A~l~--------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 82 (864)
+.||+|++|.||+|+.. +++.||||+.+........
T Consensus 75 ~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------ 118 (382)
T 3tt0_A 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL------------------------------------ 118 (382)
T ss_dssp EEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHH------------------------------------
T ss_pred eEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHH------------------------------------
Confidence 67999999999999963 2467999998765332110
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh---------
Q 002927 83 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA--------- 149 (864)
Q Consensus 83 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~--------- 149 (864)
-++.+|++.+.++.. ++ .|.+++. ....+|||||++|.+|.++.....
T Consensus 119 ~~~~~E~~~l~~l~~-----------------hp--nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~ 179 (382)
T 3tt0_A 119 SDLISEMEMMKMIGK-----------------HK--NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 179 (382)
T ss_dssp HHHHHHHHHHHHHCC-----------------CT--TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCC
T ss_pred HHHHHHHHHHHHhcC-----------------Cc--hhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccc
Confidence 013456666666521 11 1233332 456789999999999998865332
Q ss_pred ------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 150 ------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 150 ------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..++...+...+.+++ +..+|+.|++|||+||+|||++.+ +.++|+|||++..+.
T Consensus 180 ~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~kL~DFG~a~~~~ 242 (382)
T 3tt0_A 180 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED--NVMKIADFGLARDIH 242 (382)
T ss_dssp CCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT--CCEEECSCSCCCCSS
T ss_pred cccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCC--CcEEEcccCcccccc
Confidence 1256666666655554 888999999999999999999865 899999999988654
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.2e-13 Score=159.71 Aligned_cols=140 Identities=19% Similarity=0.300 Sum_probs=99.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+...... .-++..|.
T Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---------------------------------------~~~~~~E~ 53 (483)
T 3sv0_A 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---------------------------------------HPQLLYES 53 (483)
T ss_dssp CCCEECSSCEEEEEEETTTCCEEEEEEEETTCS---------------------------------------SCCHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCcEEEEEEeccccc---------------------------------------cHHHHHHH
Confidence 67999999999999975 799999998653211 11244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+..+.+. ..+..-..+. ....+|||||+ |.+|.++.......++...+...+.+++
T Consensus 54 ~il~~L~~~-----------------~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~a 115 (483)
T 3sv0_A 54 KIYRILQGG-----------------TGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINR 115 (483)
T ss_dssp HHHHHTTTS-----------------TTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCC-----------------CCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHH
Confidence 655555431 1111112222 45678999999 8899888654455677777777666655
Q ss_pred HHHHHhcCeeccCCCCCCeEEcc-CCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSK-DPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~-~~~g~i~LiDFG~~~~l~~ 207 (864)
+..||..||+||||||.||||.. +.++.++|+|||+++.+..
T Consensus 116 L~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 116 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp HHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred HHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 88999999999999999999941 1238999999999987654
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=1.2e-13 Score=151.29 Aligned_cols=139 Identities=18% Similarity=0.175 Sum_probs=100.1
Q ss_pred cccccccceeeEEEEe-----cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l-----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||+|++|.||+|+. .+|+.||||+.+..-.... -.+
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~-------------------------------------~~~ 71 (327)
T 3lxl_A 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ-------------------------------------RDF 71 (327)
T ss_dssp EEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHH-------------------------------------HHH
T ss_pred hhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHH-------------------------------------HHH
Confidence 6899999999999994 3689999999876532211 013
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 161 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~ 161 (864)
.+|++.+.++++ +. +.+-.++. ....+|||||++|.+|.++.......++...+...+
T Consensus 72 ~~E~~~l~~l~h------------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~ 133 (327)
T 3lxl_A 72 QREIQILKALHS------------------DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 133 (327)
T ss_dssp HHHHHHHHTCCC------------------TTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHH
T ss_pred HHHHHHHHhcCC------------------CceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHH
Confidence 446655555422 11 11112222 233679999999999998876544456777766666
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+++ +..+|+.|++|+|+||+||+++.+ ++++|+|||++..+.
T Consensus 134 ~qi~~al~~lH~~~ivH~Dikp~NIl~~~~--~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 134 SQICKGMEYLGSRRCVHRDLAARNILVESE--AHVKIADFGLAKLLP 178 (327)
T ss_dssp HHHHHHHHHHHHTTEECSCCSGGGEEEEET--TEEEECCGGGCEECC
T ss_pred HHHHHHHHHHHhCCccCCCCChhhEEECCC--CCEEEcccccceecc
Confidence 5554 889999999999999999999865 899999999988654
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=99.45 E-value=3e-14 Score=153.08 Aligned_cols=140 Identities=16% Similarity=0.165 Sum_probs=95.5
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|+||+|+..+|+.||||+.+......- ..-.+.+|++
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~-----------------------------------~~~~~~~E~~ 52 (288)
T 1ob3_A 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEG-----------------------------------IPSTTIREIS 52 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGC-----------------------------------CCHHHHHHHH
T ss_pred hhcccCCCEEEEEEEcCCCCEEEEEEEeccccccc-----------------------------------cchhHHHHHH
Confidence 67999999999999988899999998764322100 0001233444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
.+.++++ +. +.+-.++. ....+|||||++| +|.++......+.+...+...+.+++ +
T Consensus 53 ~l~~l~h------------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l 113 (288)
T 1ob3_A 53 ILKELKH------------------SNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGI 113 (288)
T ss_dssp GGGGCCC------------------TTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHhcCC------------------CCEeeeeeEEccCCeEEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence 4443321 11 11222222 4667899999997 66665443334566665555555544 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+|+.|++|+|+||+||+++.+ ++++|+|||++..+.
T Consensus 114 ~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~ 151 (288)
T 1ob3_A 114 AYCHDRRVLHRDLKPQNLLINRE--GELKIADFGLARAFG 151 (288)
T ss_dssp HHHHHTTCCCSCCCGGGEEECTT--SCEEECCTTHHHHHC
T ss_pred HHHHHCCeecCCCCHHHEEEcCC--CCEEEeECccccccC
Confidence 88999999999999999999865 899999999987654
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=2.1e-13 Score=159.92 Aligned_cols=144 Identities=15% Similarity=0.208 Sum_probs=95.5
Q ss_pred ccccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 8 FVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 8 fd~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
+..+.||+|++|+||+|+ ..++.|++|+..+.....-..+ ++. ..-.+.+
T Consensus 339 ~~~~~LG~G~fg~Vy~~~-~~~~~~~~k~~~~~~~~~~~~~------------------------~~~-----~~~~~~~ 388 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDS-YLDFDVIIKERVKKGYRDERLD------------------------ENI-----RKSRTAR 388 (540)
T ss_dssp ---------CCEEEEEEE-CSSCEEEEEEECCCTTSCHHHH------------------------HHH-----HHHHHHH
T ss_pred CCCCEEeeCCCEEEEEEE-ECCCeEEEEEEecccccchhhh------------------------hHH-----HHHHHHH
Confidence 445789999999999995 4689999998765332110000 000 0112567
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
|++.+.++++ +++..|..+. ....+|||||++|.+|.++... ...++..+++.
T Consensus 389 E~~il~~l~h------------------~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~------~~~i~~qi~~a- 443 (540)
T 3en9_A 389 EARYLALVKD------------------FGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED------NLDIAYKIGEI- 443 (540)
T ss_dssp HHHHHHHGGG------------------GTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT------CTHHHHHHHHH-
T ss_pred HHHHHHhcCC------------------CCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH------HHHHHHHHHHH-
Confidence 8887777744 3455456664 5678999999999999877432 23455555544
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 210 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 210 (864)
+..+|+.|++|||+||+|||++. +++|+|||+++.++....
T Consensus 444 L~~LH~~gIiHrDiKp~NILl~~----~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 444 VGKLHKNDVIHNDLTTSNFIFDK----DLYIIDFGLGKISNLDED 484 (540)
T ss_dssp HHHHHHTTEECTTCCTTSEEESS----SEEECCCTTCEECCCHHH
T ss_pred HHHHHHCcCccCCCCHHHEEECC----eEEEEECccCEECCCccc
Confidence 78899999999999999999974 899999999999877543
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.45 E-value=8.4e-14 Score=163.35 Aligned_cols=141 Identities=18% Similarity=0.190 Sum_probs=103.5
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|++++++.||||+.+++.... -+|.+|++
T Consensus 273 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 314 (535)
T 2h8h_A 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--------------------------------------EAFLQEAQ 314 (535)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECTTSSCH--------------------------------------HHHHHHHH
T ss_pred eecccCCCeEEEEEEECCCceEEEEEeCCCCCCH--------------------------------------HHHHHHHH
Confidence 5799999999999999877889999987643210 02455777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--HH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~--l~ 167 (864)
.+.++++.. -+.+-.++.....+|||||++|.+|.++..... ..+....+...+.+++ +.
T Consensus 315 ~l~~l~hpn-----------------iv~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~ 377 (535)
T 2h8h_A 315 VMKKLRHEK-----------------LVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 377 (535)
T ss_dssp HHHHCCCTT-----------------BCCEEEEECSSSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCC-----------------EeeEEEEEeeccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 766653310 111222222566789999999999998865322 3366666666666555 88
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
.+|..||+||||||.|||++.+ +.++|+|||+++.+...
T Consensus 378 ~LH~~~ivHrDlkp~NIll~~~--~~~kl~DFG~a~~~~~~ 416 (535)
T 2h8h_A 378 YVERMNYVHRDLRAANILVGEN--LVCKVADFGLARLIEDN 416 (535)
T ss_dssp HHHHTTCCCSCCSGGGEEECGG--GCEEECCTTSTTTCCCH
T ss_pred HHHhCCeeCCCCCHhhEEEcCC--CcEEEcccccceecCCC
Confidence 8999999999999999999865 89999999999877643
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=1.1e-13 Score=153.33 Aligned_cols=142 Identities=16% Similarity=0.127 Sum_probs=97.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.+......-. .. -++.+|+
T Consensus 60 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~----------------------------~~------~~~~~E~ 105 (348)
T 1u5q_A 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE----------------------------KW------QDIIKEV 105 (348)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHH----------------------------HH------HHHHHHH
T ss_pred eEEccCCCEEEEEEEEccCCeEEEEEEEccccccchH----------------------------HH------HHHHHHH
Confidence 57999999999999975 8999999987643211100 00 0134566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++++ +. +.+-.++. ....+|||||++| ++.+........++...+...+.+++
T Consensus 106 ~~l~~l~h------------------pniv~~~~~~~~~~~~~lv~e~~~g-~l~~~l~~~~~~l~~~~~~~i~~qi~~a 166 (348)
T 1u5q_A 106 RFLQKLRH------------------PNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQG 166 (348)
T ss_dssp HHHHHCCC------------------TTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHHTSCCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------CCEeeEEEEEEECCeEEEEEecCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 66555432 11 12222222 4567899999986 45555433444566666665555544
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 167 L~~LH~~~ivH~Dlkp~NIll~~~--~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 167 LAYLHSHNMIHRDVKAGNILLSEP--GLVKLGDFGSASIMAP 206 (348)
T ss_dssp HHHHHHTTCBCCCCSGGGEEEETT--TEEEECCCTTCBSSSS
T ss_pred HHHHHhCCeeeCCCCHHHEEECCC--CCEEEeeccCceecCC
Confidence 888999999999999999999865 8999999999877653
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=2.1e-13 Score=146.73 Aligned_cols=155 Identities=16% Similarity=0.204 Sum_probs=104.8
Q ss_pred ccccccc-cccccccceeeEEEEec-CCCEEEEEEecCChHHHH-HHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhH
Q 002927 4 MFMDFVE-TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTII-LEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 80 (864)
Q Consensus 4 ~F~~fd~-~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~-~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~ 80 (864)
.++.|+. +.||+|++|.||+|+.+ +|+.||||+.++...... ..+ ..+..+.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~-----------------------~~~~~~~-- 69 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEE-----------------------VQELREA-- 69 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHH-----------------------HHHHHHH--
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHH-----------------------HHHHHHH--
Confidence 3445543 78999999999999986 799999999865421100 000 0111111
Q ss_pred hhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHH
Q 002927 81 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 158 (864)
Q Consensus 81 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~ 158 (864)
+.+|++.+.++.. ++. +.+-.++. ....+|||||++|.+|.++... ...++...+.
T Consensus 70 ----~~~e~~~l~~l~~-----------------h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~ 127 (298)
T 1phk_A 70 ----TLKEVDILRKVSG-----------------HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETR 127 (298)
T ss_dssp ----HHHHHHHHHHHTT-----------------CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HSSCCHHHHH
T ss_pred ----HHHHHHHHHHhcC-----------------CCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhc-cCCCCHHHHH
Confidence 3456666666531 111 11222222 4557899999999999887643 3356666666
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 128 ~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~--~~~kl~dfg~~~~~~~ 176 (298)
T 1phk_A 128 KIMRALLEVICALHKLNIVHRDLKPENILLDDD--MNIKLTDFGFSCQLDP 176 (298)
T ss_dssp HHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCCTTCEECCT
T ss_pred HHHHHHHHHHHHHHHCCcccCCCCcceEEEcCC--CcEEEecccchhhcCC
Confidence 6555554 888999999999999999999865 8999999999887654
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=7.3e-14 Score=154.67 Aligned_cols=140 Identities=17% Similarity=0.180 Sum_probs=96.8
Q ss_pred ccccccccceeeEEEEe-----c-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 10 ETPLATASIAQVHRATL-----V-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 10 ~~plasaSigqV~~A~l-----~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
.+.||+|++|.||+|+. . +|+.||||+.+........ -
T Consensus 27 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~ 70 (359)
T 3vhe_A 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH------------------------------------R 70 (359)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHH------------------------------------H
T ss_pred ceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHH------------------------------------H
Confidence 36899999999999983 2 5789999998764332110 0
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e--cCCceEEEeecCCcCCCChHHHhhc--------
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q--SSETVLILEFMDGIRLNDCESLEAF-------- 150 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~--~~~~vLvmE~i~G~~L~~~~~~~~~-------- 150 (864)
.+.+|++.+.++.+ +++ |.+++ . ....++||||++|.+|.++......
T Consensus 71 ~~~~E~~~l~~l~~-----------------hpn--iv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~ 131 (359)
T 3vhe_A 71 ALMSELKILIHIGH-----------------HLN--VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTK 131 (359)
T ss_dssp HHHHHHHHHHHHCC-----------------CTT--BCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--
T ss_pred HHHHHHHHHHhhcC-----------------Ccc--eeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccc
Confidence 14456666666521 111 22333 2 2347899999999999887543211
Q ss_pred ---------------------------------------------------------CCCHHHHHHHHHHHH--HHHHHh
Q 002927 151 ---------------------------------------------------------GVNKQKVVEEITRAY--AHQIYV 171 (864)
Q Consensus 151 ---------------------------------------------------------~~~~~~l~~~~~~~~--l~~i~~ 171 (864)
.++...+...+.+++ +..+|.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~ 211 (359)
T 3vhe_A 132 GARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 211 (359)
T ss_dssp ----------------------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH
Confidence 044444555444444 888999
Q ss_pred cCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 172 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 172 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.|++|+|+||.|||++.+ +.++|+|||++..+.
T Consensus 212 ~~ivH~Dikp~NIll~~~--~~~kl~Dfg~a~~~~ 244 (359)
T 3vhe_A 212 RKCIHRDLAARNILLSEK--NVVKICDFGLARDIY 244 (359)
T ss_dssp TTCCCSCCSGGGEEECGG--GCEEECCCGGGSCTT
T ss_pred CCcccCCCChhhEEEcCC--CcEEEEeccceeeec
Confidence 999999999999999865 899999999997653
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.45 E-value=1.2e-13 Score=154.05 Aligned_cols=140 Identities=20% Similarity=0.304 Sum_probs=90.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++||+|++|+||+|+.. +|+.||||+.+....... ..+ .+.+|+
T Consensus 31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~-----------------------------~~~------~~~~E~ 75 (367)
T 1cm8_A 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL-----------------------------FAK------RAYREL 75 (367)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSSTTSSHH-----------------------------HHH------HHHHHH
T ss_pred EEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHH-----------------------------HHH------HHHHHH
Confidence 68999999999999975 899999998754322110 001 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEec-------CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-------SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-------~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
+.+.++++.. -+.+-.++.. +..+|||||+ |.+|.++.. ...++...+...+.
T Consensus 76 ~~l~~l~hpn-----------------Iv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~--~~~l~~~~~~~~~~ 135 (367)
T 1cm8_A 76 RLLKHMRHEN-----------------VIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMK--HEKLGEDRIQFLVY 135 (367)
T ss_dssp HHHHHCCBTT-----------------BCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHH--HCCCCHHHHHHHHH
T ss_pred HHHHhCCCcC-----------------CCCceeeEecCCccccCceEEEEEecC-CCCHHHHHh--cCCCCHHHHHHHHH
Confidence 5555543210 1122223221 3458999999 778877643 34566665555555
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+++ +..+|..|++|||+||+||+++.+ +.++|+|||+++....
T Consensus 136 qi~~~L~~LH~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~a~~~~~ 180 (367)
T 1cm8_A 136 QMLKGLRYIHAAGIIHRDLKPGNLAVNED--CELKILDFGLARQADS 180 (367)
T ss_dssp HHHHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEECCS
T ss_pred HHHHHHHHHHHCCccccCcCHHHEEEcCC--CCEEEEeeeccccccc
Confidence 544 888999999999999999999865 8999999999987653
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=99.45 E-value=6.5e-14 Score=149.46 Aligned_cols=141 Identities=18% Similarity=0.127 Sum_probs=96.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+..+...... ..+-.+.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----------------------------------~~~~~~~~e~ 60 (279)
T 3fdn_A 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA----------------------------------GVEHQLRREV 60 (279)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHH----------------------------------TCHHHHHHHH
T ss_pred eEEecCCCeEEEEEEEccCCcEEEEEEEeccccchh----------------------------------hHHHHHHHHH
Confidence 78999999999999976 788999998754221100 0011133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ + .|++++. ....++||||++|.+|.+.... ...++...+...+.+++
T Consensus 61 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~-~~~~~~~~~~~~~~qi~ 119 (279)
T 3fdn_A 61 EIQSHLRH------------------P--NILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELA 119 (279)
T ss_dssp HHHTTCCC------------------T--TBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH-HSSCCHHHHHHHHHHHH
T ss_pred HHHHcCCC------------------C--CCcchhheEecCCEEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHH
Confidence 44443321 1 2333332 4557899999999999877542 34466666655555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+|+||+||+++.+ +.++|+|||++......
T Consensus 120 ~~l~~LH~~~i~H~dlkp~Nili~~~--~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 120 NALSYCHSKRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSS 162 (279)
T ss_dssp HHHHHHHTTTCEECCCCGGGEEECTT--SCEEECSCCEESCC---
T ss_pred HHHHHHHhCCEecccCChHhEEEcCC--CCEEEEeccccccCCcc
Confidence 888999999999999999999865 89999999998765543
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.1e-13 Score=151.38 Aligned_cols=140 Identities=21% Similarity=0.260 Sum_probs=99.5
Q ss_pred cccccccceeeEEEEe-----cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l-----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||+|++|+||+|+. .+|+.||||+.++...+... .+
T Consensus 47 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-------------------------------------~~ 89 (326)
T 2w1i_A 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-------------------------------------DF 89 (326)
T ss_dssp EEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHH-------------------------------------HH
T ss_pred eeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHH-------------------------------------HH
Confidence 6799999999999983 37999999998764322110 13
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 161 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~ 161 (864)
.+|++.+.++++ +. +.+-.++. ....+|||||++|.+|.++.......++...+...+
T Consensus 90 ~~E~~~l~~l~h------------------~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~ 151 (326)
T 2w1i_A 90 EREIEILKSLQH------------------DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 151 (326)
T ss_dssp HHHHHHHHTCCC------------------TTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHH
T ss_pred HHHHHHHHhCCC------------------CCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHH
Confidence 445555555422 11 12222222 235689999999999998865443446766666665
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++..+..
T Consensus 152 ~qi~~aL~~LH~~~ivH~dikp~NIli~~~--~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 152 SQICKGMEYLGTKRYIHRDLATRNILVENE--NRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp HHHHHHHHHHHHTTEECSCCCGGGEEEEET--TEEEECCCTTCEECCS
T ss_pred HHHHHHHHHHHhCCEeccCCCcceEEEcCC--CcEEEecCcchhhccc
Confidence 5554 888999999999999999999865 8999999999887643
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=99.45 E-value=1.5e-13 Score=155.10 Aligned_cols=138 Identities=17% Similarity=0.124 Sum_probs=93.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||+.+... . +.+|.
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~----------------------------------------~~~E~ 105 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP--K----------------------------------------ARREV 105 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECSH--H----------------------------------------HHHHH
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcch--h----------------------------------------HHHHH
Confidence 57999999999999976 79999999976321 1 11222
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-----cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-----~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~ 162 (864)
..+.+..+ +++ +.+-.++. ....+|||||++|++|.++..... ..++...+...+.
T Consensus 106 ~~~~~~~~-----------------hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ 168 (400)
T 1nxk_A 106 ELHWRASQ-----------------CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 168 (400)
T ss_dssp HHHHHHTT-----------------STTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHH
T ss_pred HHHHHhcC-----------------CCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHH
Confidence 22222111 111 22222222 234689999999999988754221 2356666665555
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCC-CCceEEEecccccccCh
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~ 207 (864)
+++ +..+|..||+|||+||+|||++.+. ++.++|+|||+++....
T Consensus 169 qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~ 216 (400)
T 1nxk_A 169 SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 216 (400)
T ss_dssp HHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-
T ss_pred HHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCC
Confidence 554 8889999999999999999998631 47899999999987664
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.45 E-value=1.7e-13 Score=147.07 Aligned_cols=138 Identities=20% Similarity=0.318 Sum_probs=98.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+...... .-.+.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------------------------------------~~~~~~e~ 55 (296)
T 4hgt_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---------------------------------------HPQLHIES 55 (296)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEC------------------------------------------CCCHHHHH
T ss_pred eeecCCCCeEEEEEEEcCCCceEEEEeeccccc---------------------------------------chHHHHHH
Confidence 67999999999999974 899999998543211 11244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE-e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI-Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~-~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.+. ..+..-..+ . ....+|||||+ |.+|.++.......++...+...+.+++
T Consensus 56 ~~l~~l~~~-----------------~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~ 117 (296)
T 4hgt_A 56 KIYKMMQGG-----------------VGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISR 117 (296)
T ss_dssp HHHHHHTTS-----------------TTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCC-----------------CCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 666665431 111111112 1 45568999999 8899887654445567776666666555
Q ss_pred HHHHHhcCeeccCCCCCCeEE---ccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLV---SKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv---~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|+.|++|+|+||.||++ +.+ +.++|+|||++..+..
T Consensus 118 l~~LH~~~ivH~Dlkp~NIl~~~~~~~--~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 118 IEYIHSKNFIHRDVKPDNFLMGLGKKG--NLVYIIDFGLAKKYRD 160 (296)
T ss_dssp HHHHHHTTEECSCCSGGGEEECCGGGT--TCEEECCCTTCEECBC
T ss_pred HHHHHHCCeecCCCCHHHeeeeccCCC--CeEEEecCccceeccC
Confidence 889999999999999999999 443 8899999999987654
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=99.45 E-value=8.1e-14 Score=155.96 Aligned_cols=74 Identities=8% Similarity=0.055 Sum_probs=53.7
Q ss_pred ceEEEeecCCcCCCChHHHhhcCCCH-------HHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEec
Q 002927 129 TVLILEFMDGIRLNDCESLEAFGVNK-------QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDF 199 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~~~~~~~~-------~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDF 199 (864)
.+|||||++ ++|.++...... ... ..+...+.+++ +..+|..||+|||+||+|||++.+ ++++|+||
T Consensus 175 ~~lv~E~~~-g~L~~~l~~~~~-~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~--~~~kL~DF 250 (377)
T 3byv_A 175 RFFLYPRMQ-SNLQTFGEVLLS-HSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQR--GGVFLTGF 250 (377)
T ss_dssp EEEEEECCS-EEHHHHHHHHHH-TTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT--CCEEECCG
T ss_pred EEEEEeccC-CCHHHHHHhccc-cccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--CCEEEEec
Confidence 579999995 588877543221 111 23333333333 788999999999999999999965 89999999
Q ss_pred ccccccC
Q 002927 200 GLTKKLS 206 (864)
Q Consensus 200 G~~~~l~ 206 (864)
|++....
T Consensus 251 G~a~~~~ 257 (377)
T 3byv_A 251 EHLVRDG 257 (377)
T ss_dssp GGCEETT
T ss_pred hhheecC
Confidence 9988543
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.44 E-value=7e-14 Score=156.02 Aligned_cols=142 Identities=19% Similarity=0.142 Sum_probs=96.6
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||+|++|.||+|+.. +++.||||+.+....... +.+
T Consensus 77 ~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~ 120 (367)
T 3l9p_A 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD------------------------------------ELD 120 (367)
T ss_dssp EECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHH------------------------------------HHH
T ss_pred eEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhh------------------------------------HHH
Confidence 57999999999999953 577899998765432211 112
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhh------cCCCHHHH
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA------FGVNKQKV 157 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~------~~~~~~~l 157 (864)
+.+|+..+.++.+. .-+.+-.++. ....+|||||++|.+|.++..... ..+....+
T Consensus 121 ~~~E~~~l~~l~hp-----------------nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~ 183 (367)
T 3l9p_A 121 FLMEALIISKFNHQ-----------------NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 183 (367)
T ss_dssp HHHHHHHHHHCCCT-----------------TBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHH
T ss_pred HHHHHHHHHhCCCC-----------------CCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHH
Confidence 44566665554221 0112222222 456799999999999998865432 22555555
Q ss_pred HHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCC-CCceEEEeccccccc
Q 002927 158 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKL 205 (864)
Q Consensus 158 ~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l 205 (864)
...+.+++ +..+|..|++|||+||.|||++.++ +..++|+|||+++.+
T Consensus 184 ~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~ 234 (367)
T 3l9p_A 184 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 234 (367)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCcccccc
Confidence 55555544 8889999999999999999998542 245999999998643
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.1e-13 Score=162.29 Aligned_cols=144 Identities=15% Similarity=0.137 Sum_probs=99.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||+.+...... -..+..+.+|.
T Consensus 190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~----------------------------------~~~~~~~~~E~ 235 (576)
T 2acx_A 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK----------------------------------RKGEAMALNEK 235 (576)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH----------------------------------TTCHHHHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhh----------------------------------hHHHHHHHHHH
Confidence 68999999999999986 89999999875311000 00111244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.+.+ -+.+-..+. ....+|||||++|++|.+..... ..+++...+...+.+++
T Consensus 236 ~iL~~l~hp~-----------------Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~a 298 (576)
T 2acx_A 236 QILEKVNSRF-----------------VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCG 298 (576)
T ss_dssp HHHHHCCCTT-----------------BCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCC-----------------EeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 6655543211 111222222 45678999999999998765322 12366666655555544
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..||+|||+||+|||++.+ |.++|+|||++..+..
T Consensus 299 L~yLH~~gIvHrDLKPeNILld~~--g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 299 LEDLHRERIVYRDLKPENILLDDH--GHIRISDLGLAVHVPE 338 (576)
T ss_dssp HHHHHHTTEECCCCCGGGEEECTT--SCEEECCCTTCEECCT
T ss_pred HHHHHHCCEeccCCchheEEEeCC--CCeEEEecccceeccc
Confidence 888999999999999999999865 8999999999987754
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=2e-13 Score=147.96 Aligned_cols=140 Identities=15% Similarity=0.140 Sum_probs=100.7
Q ss_pred cccccccceeeEEEEe------cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATL------VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l------~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||+|++|.||+|+. .+|+.||||+.++....... -.
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~ 72 (313)
T 1t46_A 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER------------------------------------EA 72 (313)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHH------------------------------------HH
T ss_pred HhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHH------------------------------------HH
Confidence 6799999999999985 25789999998765321100 11
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhc----------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAF---------- 150 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~---------- 150 (864)
+.+|++.+.++.. ++ .|++++ . ....+|||||++|.+|.++......
T Consensus 73 ~~~E~~~l~~l~~-----------------h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 133 (313)
T 1t46_A 73 LMSELKVLSYLGN-----------------HM--NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPA 133 (313)
T ss_dssp HHHHHHHHHHHCC-----------------CT--TBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------
T ss_pred HHHHHHHHhhccc-----------------CC--CeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhccccccccccccc
Confidence 4456666666511 11 133333 2 5678999999999999987653321
Q ss_pred -------CCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 151 -------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 151 -------~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 134 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 197 (313)
T 1t46_A 134 IMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG--RITKICDFGLARDIKN 197 (313)
T ss_dssp ------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETT--TEEEECCCGGGSCTTS
T ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCC--CCEEEccccccccccc
Confidence 255666666555554 888999999999999999999865 8999999999887654
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=99.44 E-value=1.8e-13 Score=151.76 Aligned_cols=148 Identities=18% Similarity=0.171 Sum_probs=97.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+...... ..... .-.+.+|+
T Consensus 30 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------------~~~~~--------------~~~~~~E~ 77 (351)
T 3c0i_A 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTS------------------SPGLS--------------TEDLKREA 77 (351)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHT------------------SSSCC--------------HHHHHHHH
T ss_pred eEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccc------------------cccch--------------HHHHHHHH
Confidence 67999999999999976 79999999875311000 00000 01244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhc---CCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF---GVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~---~~~~~~l~~~~~~~~ 165 (864)
+.+.++++. .-+.+-.++. ....+|||||++|.+|.+....... .++...+...+.+++
T Consensus 78 ~~l~~l~hp-----------------nIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~ 140 (351)
T 3c0i_A 78 SICHMLKHP-----------------HIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140 (351)
T ss_dssp HHHHHCCCT-----------------TBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred HHHHhCCCC-----------------CCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHH
Confidence 665554321 0122222333 4567899999999999766432221 245555555444444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCC-CCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||.|||++.++ .+.++|+|||++..+..
T Consensus 141 ~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~ 185 (351)
T 3c0i_A 141 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE 185 (351)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCT
T ss_pred HHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecC
Confidence 8889999999999999999998642 24599999999987654
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=9.3e-14 Score=150.14 Aligned_cols=137 Identities=14% Similarity=0.165 Sum_probs=98.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.. +|+.||||+.+....... .-++.+|+
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~e~ 71 (303)
T 3a7i_A 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDE------------------------------------IEDIQQEI 71 (303)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTT------------------------------------HHHHHHHH
T ss_pred hhhcccCCeEEEEEEECCCCcEEEEEEecccccHHH------------------------------------HHHHHHHH
Confidence 67999999999999975 799999999765321100 00133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++.+ + .|++++ . ....++||||++|.+|.++.. ...++...+...+.+++
T Consensus 72 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~qi~ 129 (303)
T 3a7i_A 72 TVLSQCDS------------------P--YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE--PGPLDETQIATILREIL 129 (303)
T ss_dssp HHHHHCCC------------------T--TBCCEEEEEEETTEEEEEEECCTTEEHHHHHT--TSCCCHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------C--CEeEEEEEEecCCeEEEEEEeCCCCcHHHHHh--cCCCCHHHHHHHHHHHH
Confidence 55444321 1 122333 2 456789999999999988743 44566666666555554
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 130 ~~l~~lH~~~i~H~dl~p~Nil~~~~--~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 130 KGLDYLHSEKKIHRDIKAANVLLSEH--GEVKLADFGVAGQLTD 171 (303)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECBT
T ss_pred HHHHHHHHCCCccCCCChheEEECCC--CCEEEeecccceecCc
Confidence 888999999999999999999865 8999999999877654
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.44 E-value=1.8e-13 Score=147.09 Aligned_cols=138 Identities=20% Similarity=0.329 Sum_probs=98.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+....... -++.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------------------------------------~~~~~e~ 55 (296)
T 3uzp_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---------------------------------------PQLHIES 55 (296)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC---------------------------------------CHHHHHH
T ss_pred EEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch---------------------------------------hHHHHHH
Confidence 78999999999999974 8999999986543210 0144566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+.. .+|.+. . ....+|||||+ |.+|.++.......++...+...+.+++
T Consensus 56 ~~l~~l~~~~-------------------~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~ 115 (296)
T 3uzp_A 56 KIYKMMQGGV-------------------GIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMI 115 (296)
T ss_dssp HHHHHHTTST-------------------TCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHhhcCC-------------------CCCccccccCCCCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHH
Confidence 6666654311 122222 1 45568999999 8899888654445567766666665554
Q ss_pred --HHHHHhcCeeccCCCCCCeEEcc-CCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSK-DPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~-~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|+.|++|+|+||.||+++. +.++.++|+|||++..+..
T Consensus 116 ~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 116 SRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp HHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred HHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 88899999999999999999951 1237899999999887654
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.44 E-value=1.3e-13 Score=147.70 Aligned_cols=139 Identities=20% Similarity=0.168 Sum_probs=98.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+...... -.+.+|+
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--------------------------------------~~~~~E~ 60 (288)
T 3kfa_A 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------------------------------------EEFLKEA 60 (288)
T ss_dssp EESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHH--------------------------------------HHHHHHH
T ss_pred eecCCCCceeEEEeEecCCCEEEEEEecCcCHHHH--------------------------------------HHHHHHH
Confidence 68999999999999986 68999999987543211 0134456
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++++. .-+.+-.++. ....++||||++|.+|.++.... ....+...+...+.+++
T Consensus 61 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~ 123 (288)
T 3kfa_A 61 AVMKEIKHP-----------------NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123 (288)
T ss_dssp HHHHHCCCT-----------------TBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHhCCCC-----------------CEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHH
Confidence 555554321 0111222222 45678999999999998876432 22355555555444444
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 124 l~~lH~~~i~H~dikp~Nil~~~~--~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 124 MEYLEKKNFIHRDLAARNCLVGEN--HLVKVADFGLSRLMT 162 (288)
T ss_dssp HHHHHHHTCCCSCCSGGGEEECGG--GCEEECCCCGGGTSC
T ss_pred HHHHHHCCccCCCCCcceEEEcCC--CCEEEccCccceecc
Confidence 888999999999999999999865 899999999987654
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.2e-13 Score=150.37 Aligned_cols=138 Identities=16% Similarity=0.187 Sum_probs=93.1
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|+. +|+.||||+.+......- . . -.+.+|++
T Consensus 43 ~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~--~-----------------------~----------~~~~~E~~ 86 (309)
T 3p86_A 43 EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAE--R-----------------------V----------NEFLREVA 86 (309)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHH--H-----------------------H----------HHHHHHHH
T ss_pred eEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHH--H-----------------------H----------HHHHHHHH
Confidence 6899999999999986 789999999764421110 0 0 01445666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh--cCCCHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITRA 164 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~--~~~~~~~l~~~~~~~ 164 (864)
.+.++++ +. |.+++. ....++||||++|.+|.++..... ..++...+...+.++
T Consensus 87 ~l~~l~h------------------p~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi 146 (309)
T 3p86_A 87 IMKRLRH------------------PN--IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDV 146 (309)
T ss_dssp HHHHCCC------------------TT--BCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHH
T ss_pred HHHhCCC------------------CC--EeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHH
Confidence 6666532 11 223332 456789999999999988754211 125555555555554
Q ss_pred H--HHHHHhcC--eeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 165 Y--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 165 ~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+ +..+|..| ++|||+||+||+++.+ +.++|+|||++....
T Consensus 147 ~~aL~~LH~~~~~ivH~Dikp~NIll~~~--~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 147 AKGMNYLHNRNPPIVHRNLKSPNLLVDKK--YTVKVCDFGLSRLKA 190 (309)
T ss_dssp HHHHHHHHTSSSCCCCTTCCGGGEEECTT--CCEEECCCC------
T ss_pred HHHHHHHHcCCCCEECCCCChhhEEEeCC--CcEEECCCCCCcccc
Confidence 4 88899999 9999999999999865 899999999987543
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.44 E-value=2.4e-13 Score=148.99 Aligned_cols=147 Identities=19% Similarity=0.223 Sum_probs=99.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+........ ..... -++.+|+
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-----------------~~~~~--------------~~~~~E~ 65 (326)
T 2y0a_A 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR-----------------RGVSR--------------EDIEREV 65 (326)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCS-----------------SSBCH--------------HHHHHHH
T ss_pred eEEeeCCCeEEEEEEECCCCcEEEEEEEEcccccccc-----------------chhhH--------------HHHHHHH
Confidence 67999999999999986 7999999987643211000 00000 1134466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+.++++ +. +.+-.++. ....+|||||++|.+|.++.. ....++...+...+.+++
T Consensus 66 ~~l~~l~h------------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~a 126 (326)
T 2y0a_A 66 SILKEIQH------------------PNVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFLKQILNG 126 (326)
T ss_dssp HHHHHCCC------------------TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHT-TSSCCBHHHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------CCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHH-hcCCcCHHHHHHHHHHHHHH
Confidence 55555432 11 12222223 456789999999999988753 223456666665555554
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCC--CCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDP--PHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~--~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.||+++.++ ..+++|+|||++..++.
T Consensus 127 l~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~ 170 (326)
T 2y0a_A 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170 (326)
T ss_dssp HHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCT
T ss_pred HHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCC
Confidence 8889999999999999999998651 12799999999987653
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.44 E-value=9.3e-14 Score=153.93 Aligned_cols=140 Identities=19% Similarity=0.246 Sum_probs=90.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+...... .+.+|+
T Consensus 59 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~---------------------------------------~~~~E~ 99 (349)
T 2w4o_A 59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKK---------------------------------------IVRTEI 99 (349)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------------------------------------------C
T ss_pred eEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHH---------------------------------------HHHHHH
Confidence 68999999999999987 78999999987532110 123355
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.+. .-+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++ +
T Consensus 100 ~~l~~l~h~-----------------niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~L 161 (349)
T 2w4o_A 100 GVLLRLSHP-----------------NIIKLKEIFETPTEISLVLELVTGGELFDRIV-EKGYYSERDAADAVKQILEAV 161 (349)
T ss_dssp HHHHHCCCT-----------------TBCCEEEEEECSSEEEEEECCCCSCBHHHHHT-TCSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCC-----------------CCcceeeeEecCCeEEEEEEeCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 555554221 0112222222 456789999999999987643 223355666655555554 8
Q ss_pred HHHHhcCeeccCCCCCCeEEcc-CCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSK-DPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~-~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..|++|+|+||+||+++. ++++.++|+|||++..+..
T Consensus 162 ~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 162 AYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp HHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred HHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 8899999999999999999975 2248899999999886643
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.4e-13 Score=157.18 Aligned_cols=143 Identities=17% Similarity=0.205 Sum_probs=96.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+........ .-.+.+|+
T Consensus 32 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~-----------------------------------~~~~~~E~ 76 (432)
T 3n9x_A 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLID-----------------------------------CKRILREI 76 (432)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHH-----------------------------------HHHHHHHH
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHH-----------------------------------HHHHHHHH
Confidence 68999999999999976 7999999998754322110 00134466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-c-----CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S-----SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~-----~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~ 163 (864)
+.+.++++.. -+.+-.++. . ...+|||||++| +|.++.. ....++...+...+.+
T Consensus 77 ~~l~~l~h~n-----------------Iv~l~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~-~~~~l~~~~~~~i~~q 137 (432)
T 3n9x_A 77 TILNRLKSDY-----------------IIRLYDLIIPDDLLKFDELYIVLEIADS-DLKKLFK-TPIFLTEEHIKTILYN 137 (432)
T ss_dssp HHHHHCCCTT-----------------BCCEEEECCCSCTTTCCCEEEEEECCSE-EHHHHHH-SSCCCCHHHHHHHHHH
T ss_pred HHHHHcCCCC-----------------cceEEEEEecCCCCcCCeEEEEEecCCc-CHHHHHh-ccCCCCHHHHHHHHHH
Confidence 6665553210 122222222 1 456899999986 6666543 1223566665555555
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
++ +..+|..|++|||+||+|||++.+ +.++|+|||+++.+....
T Consensus 138 il~aL~~LH~~givHrDlkp~NILl~~~--~~~kL~DFGla~~~~~~~ 183 (432)
T 3n9x_A 138 LLLGENFIHESGIIHRDLKPANCLLNQD--CSVKVCDFGLARTINSEK 183 (432)
T ss_dssp HHHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEEC----
T ss_pred HHHHHHHHHHCCCCCCCCCHHHeEECCC--CCEEEccCCCcccccccc
Confidence 54 889999999999999999999865 899999999999876543
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.44 E-value=7.3e-14 Score=155.08 Aligned_cols=145 Identities=18% Similarity=0.186 Sum_probs=99.2
Q ss_pred cccccccceeeEEEEe----cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATL----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|++|+||+|+. .+|+.||||+.+......- ....-.+.
T Consensus 60 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~---------------------------------~~~~~~~~ 106 (355)
T 1vzo_A 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQK---------------------------------AKTTEHTR 106 (355)
T ss_dssp EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEE---------------------------------ESSGGGCC
T ss_pred EEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhh---------------------------------hhHHHHHH
Confidence 6799999999999997 3799999998764211000 00001133
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
+|.+.+.++++ ++.+ .+-..+. ....+|||||++|.+|.++... ...+....+...+.++
T Consensus 107 ~E~~~l~~l~~-----------------h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi 168 (355)
T 1vzo_A 107 TERQVLEHIRQ-----------------SPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQ-RERFTEHEVQIYVGEI 168 (355)
T ss_dssp CHHHHHHHHHT-----------------CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHH-HSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHccC-----------------CCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHH-cCCCCHHHHHHHHHHH
Confidence 45556666542 1111 1112222 4567899999999999887643 3346666666555554
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+ +..+|..|++|||+||.|||++.+ ++++|+|||++..+...
T Consensus 169 ~~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~kl~DfG~a~~~~~~ 212 (355)
T 1vzo_A 169 VLALEHLHKLGIIYRDIKLENILLDSN--GHVVLTDFGLSKEFVAD 212 (355)
T ss_dssp HHHHHHHHHTTCCCCCCCGGGEEECTT--SCEEESCSSEEEECCGG
T ss_pred HHHHHHHHHCCcccCCCCHHHEEECCC--CcEEEeeCCCCeecccC
Confidence 4 888999999999999999999865 89999999999876543
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.8e-13 Score=149.38 Aligned_cols=151 Identities=19% Similarity=0.228 Sum_probs=99.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.++.....-. ........++.+|+
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------------------~~~~~~~~~~~~E~ 66 (322)
T 2ycf_A 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGS-----------------------------AREADPALNVETEI 66 (322)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECC--------------------------------------------CHHHHH
T ss_pred eEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcc-----------------------------cccchhhhhHHHHH
Confidence 68999999999999976 7899999998654221000 00001123466677
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~ 167 (864)
+.+.++.+. .-+.+-.++.....++||||++|.+|.+... ....++...+...+.+++ +.
T Consensus 67 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~ 128 (322)
T 2ycf_A 67 EILKKLNHP-----------------CIIKIKNFFDAEDYYIVLELMEGGELFDKVV-GNKRLKEATCKLYFYQMLLAVQ 128 (322)
T ss_dssp HHHHHCCCT-----------------TBCCEEEEEESSSEEEEEECCTTEETHHHHS-TTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCC-----------------CCceEeeEEcCCceEEEEecCCCCcHHHHHh-ccCCCCHHHHHHHHHHHHHHHH
Confidence 766665321 0122223333556899999999999987643 233456555555554444 88
Q ss_pred HHHhcCeeccCCCCCCeEEccCC-CCceEEEecccccccChH
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~~ 208 (864)
.+|..|++|+|+||.||+++.++ ++.++|+|||++..+...
T Consensus 129 ~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 170 (322)
T 2ycf_A 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170 (322)
T ss_dssp HHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCC
T ss_pred HHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecccc
Confidence 89999999999999999998642 235999999999887653
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.44 E-value=7.7e-14 Score=153.83 Aligned_cols=140 Identities=16% Similarity=0.209 Sum_probs=95.1
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+.||+|++|.||+|+.. +|+.||||+.+...... - .....+.+|
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~----~------------------------------~~~~~~~~E 59 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKK----S------------------------------DMHMRVERE 59 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH----T------------------------------TCSHHHHHH
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccc----h------------------------------hHHHHHHHH
Confidence 378999999999999975 89999999875321100 0 001124455
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
++.+.++++ + .|.+++ . .+..+|||||++ ++|.+... ....++...+...+.++
T Consensus 60 ~~~l~~l~h------------------p--nIv~l~~~~~~~~~~~lv~E~~~-g~l~~~l~-~~~~l~~~~~~~i~~qi 117 (336)
T 3h4j_B 60 ISYLKLLRH------------------P--HIIKLYDVITTPTDIVMVIEYAG-GELFDYIV-EKKRMTEDEGRRFFQQI 117 (336)
T ss_dssp HHHHTTCCC------------------T--TBCCEEEEEECSSEEEEEECCCC-EEHHHHHH-HHCSCCHHHHHHHHHHH
T ss_pred HHHHHhCCC------------------C--CCCeEEEEEEeCCEEEEEEECCC-CcHHHHHH-HcCCCCHHHHHHHHHHH
Confidence 555544322 1 123333 2 456789999994 55555432 23456666665555554
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+|..|++|||+||+||+++.+ +.++|+|||++....+
T Consensus 118 ~~aL~~LH~~givH~Dlkp~NIll~~~--~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 118 ICAIEYCHRHKIVHRDLKPENLLLDDN--LNVKIADFGLSNIMTD 160 (336)
T ss_dssp HHHHHHHHHHTCCCCCCSTTTEEECTT--CCEEECCSSCTBTTTT
T ss_pred HHHHHHHHHCCeEecCCchhhEEEcCC--CCEEEEEeccceeccC
Confidence 4 888999999999999999999865 8999999999876543
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=4.7e-14 Score=151.10 Aligned_cols=145 Identities=16% Similarity=0.137 Sum_probs=98.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.+......-....+ .--.+.+|+
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~------------------------------~~~~~~~E~ 74 (287)
T 4f0f_A 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE------------------------------KFQEFQREV 74 (287)
T ss_dssp EECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHC------------------------------CSHHHHHHH
T ss_pred hccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHH------------------------------HHHHHHHHH
Confidence 67999999999999985 89999999976543211000000 001244455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.+ ..|.+++. ....+|||||++|.+|.+.........+...+...+.+++
T Consensus 75 ~~l~~l~h--------------------~~i~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~ 134 (287)
T 4f0f_A 75 FIMSNLNH--------------------PNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134 (287)
T ss_dssp HHHTTCCC--------------------TTBCCEEEEETTTTEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCC--------------------CCchhhheeecCCCeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHH
Confidence 55554421 12334443 4556899999999998776543344566666666555554
Q ss_pred HHHHHhcC--eeccCCCCCCeEEccCCCCc-----eEEEecccccccCh
Q 002927 166 AHQIYVDG--FFNGDPHPGNFLVSKDPPHR-----PILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G--~~H~D~hPgNIlv~~~~~g~-----i~LiDFG~~~~l~~ 207 (864)
+..+|..| ++|+|+||.||+++.+ +. ++|+|||++.....
T Consensus 135 l~~lH~~~~~ivH~dikp~Nil~~~~--~~~~~~~~kl~Dfg~~~~~~~ 181 (287)
T 4f0f_A 135 IEYMQNQNPPIVHRDLRSPNIFLQSL--DENAPVCAKVADFGLSQQSVH 181 (287)
T ss_dssp HHHHHTSSSCCBCSCCSGGGEEESCC--CTTCSCCEEECCCTTCBCCSS
T ss_pred HHHHHhCCCCeecCCCCcceEEEecc--CCCCceeEEeCCCCccccccc
Confidence 88899999 9999999999999864 44 99999999875543
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.44 E-value=2.9e-13 Score=148.59 Aligned_cols=140 Identities=19% Similarity=0.233 Sum_probs=97.4
Q ss_pred cccccccceeeEEEEec--------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhh
Q 002927 11 TPLATASIAQVHRATLV--------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 82 (864)
Q Consensus 11 ~plasaSigqV~~A~l~--------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 82 (864)
+.||+|++|+||+|+.. +++.||||+.+....... .
T Consensus 41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~--------------------------------- 84 (334)
T 2pvf_A 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD---L--------------------------------- 84 (334)
T ss_dssp EEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHH---H---------------------------------
T ss_pred eEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHH---H---------------------------------
Confidence 78999999999999863 578999999876532211 0
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh---------
Q 002927 83 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA--------- 149 (864)
Q Consensus 83 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~--------- 149 (864)
-++.+|++.+.++.. ++ .|.+++. ....+|||||++|.+|.++.....
T Consensus 85 ~~~~~E~~~l~~l~~-----------------hp--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 145 (334)
T 2pvf_A 85 SDLVSEMEMMKMIGK-----------------HK--NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145 (334)
T ss_dssp HHHHHHHHHHHHHCC-----------------CT--TBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC-
T ss_pred HHHHHHHHHHHHhhc-----------------CC--CEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhcccccccccc
Confidence 013446666666521 11 1233332 456789999999999988754321
Q ss_pred ------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 150 ------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 150 ------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+....+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 146 ~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~kL~Dfg~~~~~~~ 209 (334)
T 2pvf_A 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN--NVMKIADFGLARDINN 209 (334)
T ss_dssp -------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCCTTCEECTT
T ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCC--CCEEEccccccccccc
Confidence 1245555555555544 888999999999999999999865 8999999999986643
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=99.44 E-value=1.7e-13 Score=152.72 Aligned_cols=143 Identities=18% Similarity=0.232 Sum_probs=98.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+...... .+.+ .+.+|+
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--~~~~---------------------------------~~~~E~ 79 (362)
T 2bdw_A 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA--RDFQ---------------------------------KLEREA 79 (362)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCH--HHHH---------------------------------HHHHHH
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCH--HHHH---------------------------------HHHHHH
Confidence 67999999999999976 79999999976432110 0000 134566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.+ +. +.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 80 ~il~~l~h------------------pnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~a 140 (362)
T 2bdw_A 80 RICRKLQH------------------PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQILES 140 (362)
T ss_dssp HHHHHCCC------------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHT-TCSCCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------CCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 66555422 11 12222222 456789999999999876643 223355666555555544
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCC-CCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.|||++.+. ++.++|+|||++..+..
T Consensus 141 l~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 141 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp HHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred HHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 8889999999999999999998542 25699999999987653
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.44 E-value=2e-13 Score=153.39 Aligned_cols=144 Identities=17% Similarity=0.220 Sum_probs=87.0
Q ss_pred cccc-ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhc
Q 002927 6 MDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 83 (864)
Q Consensus 6 ~~fd-~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 83 (864)
..|+ .+.||+|++|.||+|+.+ +|+.||||+.+....... +. .
T Consensus 9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~--~~---------------------------------~ 53 (388)
T 3oz6_A 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNST--DA---------------------------------Q 53 (388)
T ss_dssp TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHH--HH---------------------------------H
T ss_pred CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChH--HH---------------------------------H
Confidence 3444 278999999999999976 899999998754321110 00 0
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-c--CCceEEEeecCCcCCCChHHHhhcCCCHHHHHH
Q 002927 84 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 159 (864)
Q Consensus 84 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~--~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~ 159 (864)
.+.+|...+.++.. ++. +.+-.++. . ...+|||||++| +|.++.. ....+...+..
T Consensus 54 ~~~~E~~~l~~l~~-----------------h~niv~l~~~~~~~~~~~~~lv~e~~~~-~L~~~~~--~~~~~~~~~~~ 113 (388)
T 3oz6_A 54 RTFREIMILTELSG-----------------HENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIR--ANILEPVHKQY 113 (388)
T ss_dssp HHHHHHHHHHHTTT-----------------CTTBCCEEEEEECTTSSCEEEEEECCSE-EHHHHHH--HTCCCHHHHHH
T ss_pred HHHHHHHHHHhccC-----------------CCCCCeeeeEEecCCCCEEEEEecccCc-CHHHHHH--cCCCCHHHHHH
Confidence 12335555554431 111 22223332 2 246899999986 5555432 33455554444
Q ss_pred HHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 160 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 160 ~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+.+++ +..+|..|++|||+||+|||++.+ +.++|+|||+++.+.
T Consensus 114 i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~--~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 114 VVYQLIKVIKYLHSGGLLHRDMKPSNILLNAE--CHVKVADFGLSRSFV 160 (388)
T ss_dssp HHHHHHHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEESS
T ss_pred HHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCC--CCEEecCCccccccc
Confidence 444443 889999999999999999999865 899999999998764
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.4e-13 Score=153.64 Aligned_cols=75 Identities=20% Similarity=0.251 Sum_probs=55.8
Q ss_pred ceEEEeecCCcCCCChHHHhhcCCC--HH-------HHHHHHHHHHHHHHHhcCeeccCCCCCCeEEccCCCCceEEEec
Q 002927 129 TVLILEFMDGIRLNDCESLEAFGVN--KQ-------KVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDF 199 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~~~~~~~--~~-------~l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDF 199 (864)
.+|||||++ .+|.++......... .. .++..++.. +..+|..|++|||+||+|||++.+ |.++|+||
T Consensus 163 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~a-L~~LH~~~ivHrDikp~NIll~~~--~~~kL~DF 238 (371)
T 3q60_A 163 YLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRL-AANLQSKGLVHGHFTPDNLFIMPD--GRLMLGDV 238 (371)
T ss_dssp EEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHH-HHHHHHTTEEETTCSGGGEEECTT--SCEEECCG
T ss_pred EEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHH-HHHHHHCCCccCcCCHHHEEECCC--CCEEEEec
Confidence 589999999 688887654322222 11 222333333 788999999999999999999865 89999999
Q ss_pred ccccccCh
Q 002927 200 GLTKKLSS 207 (864)
Q Consensus 200 G~~~~l~~ 207 (864)
|++.....
T Consensus 239 G~a~~~~~ 246 (371)
T 3q60_A 239 SALWKVGT 246 (371)
T ss_dssp GGEEETTC
T ss_pred ceeeecCC
Confidence 99987653
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.6e-13 Score=150.45 Aligned_cols=139 Identities=21% Similarity=0.213 Sum_probs=95.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.......... .+ .+.+|+
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------------------~~------~~~~E~ 75 (331)
T 4aaa_A 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMV-----------------------------KK------IAMREI 75 (331)
T ss_dssp EEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHH-----------------------------HH------HHHHHH
T ss_pred eEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHH-----------------------------HH------HHHHHH
Confidence 68999999999999986 6999999987543221100 00 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++++ + .|++++ . ....+|||||++|..+.++.. ...+++...+...+.+++
T Consensus 76 ~~l~~l~h------------------~--~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~ 134 (331)
T 4aaa_A 76 KLLKQLRH------------------E--NLVNLLEVCKKKKRWYLVFEFVDHTILDDLEL-FPNGLDYQVVQKYLFQII 134 (331)
T ss_dssp HHHHHCCC------------------T--TBCCEEEEEEETTEEEEEEECCSEEHHHHHHH-STTCCCHHHHHHHHHHHH
T ss_pred HHHhhCCC------------------C--CEeeEEEEeecCCEEEEEEecCCcchHHHHHh-hccCCCHHHHHHHHHHHH
Confidence 55555432 1 123333 2 456789999999988877643 234566666666555554
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 135 ~~l~~LH~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 135 NGIGFCHSHNIIHRDIKPENILVSQS--GVVKLCDFGFARTLAA 176 (331)
T ss_dssp HHHHHHHHTTCCCCCCCGGGEEECTT--SCEEECCCTTC-----
T ss_pred HHHHHHHHCCEEccCcChheEEEcCC--CcEEEEeCCCceeecC
Confidence 888999999999999999999865 8999999999976644
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.2e-13 Score=146.86 Aligned_cols=141 Identities=17% Similarity=0.224 Sum_probs=99.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.++..... .. ..-.+.+|+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~------------------------------~~~~~~~e~ 62 (276)
T 2h6d_A 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRS----LD------------------------------VVGKIKREI 62 (276)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH----TT------------------------------CHHHHHHHH
T ss_pred eeecCCCCeEEEEEEECCCCceEEEEEeccccccc----hh------------------------------HHHHHHHHH
Confidence 78999999999999986 89999999876421100 00 000134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++++ + .|++++ . ....++||||++|.+|.++... ...++...+...+.+++
T Consensus 63 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~ 121 (276)
T 2h6d_A 63 QNLKLFRH------------------P--HIIKLYQVISTPTDFFMVMEYVSGGELFDYICK-HGRVEEMEARRLFQQIL 121 (276)
T ss_dssp HHHHTCCC------------------T--TBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HCSCCHHHHHHHHHHHH
T ss_pred HHHhcCCC------------------C--CEeEEEEEEecCCeEEEEEeccCCCcHHHHHhc-cCCCCHHHHHHHHHHHH
Confidence 55554322 1 123333 2 4567899999999999887643 23456665555555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+|+||.||+++.+ ++++|+|||++..+...
T Consensus 122 ~~l~~lH~~~i~H~dl~p~Nil~~~~--~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 122 SAVDYCHRHMVVHRDLKPENVLLDAH--MNAKIADFGLSNMMSDG 164 (276)
T ss_dssp HHHHHHHHHCSSCCCCCGGGEEECTT--SCEEECCCCGGGCCCC-
T ss_pred HHHHHHHHCCCccCCCChhhEEECCC--CCEEEeecccccccCCC
Confidence 888999999999999999999865 89999999999877653
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=2.3e-13 Score=148.43 Aligned_cols=140 Identities=15% Similarity=0.159 Sum_probs=98.6
Q ss_pred cccccccceeeEEEEec-----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV-----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||+|++|.||+++.+ +|+.||||+.+........ -.+
T Consensus 37 ~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~~ 80 (318)
T 3lxp_A 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHR------------------------------------SGW 80 (318)
T ss_dssp EEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHH------------------------------------HHH
T ss_pred heecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHH------------------------------------HHH
Confidence 67999999999888642 6899999998765322110 013
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEec---CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS---SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~---~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
.+|++.+.++++. .-+.+-.++.. ...+|||||++|.+|.++.. ..+++...+...+.
T Consensus 81 ~~E~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~i~~ 141 (318)
T 3lxp_A 81 KQEIDILRTLYHE-----------------HIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLP--RHSIGLAQLLLFAQ 141 (318)
T ss_dssp HHHHHHHHHCCCT-----------------TBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGG--GSCCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCc-----------------chhhEEEEEecCCCceEEEEEecccCCcHHHHHh--hCCCCHHHHHHHHH
Confidence 4466665554321 01112222221 33579999999999988753 44567776666665
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 142 ~l~~~l~~LH~~~ivH~Dikp~Nil~~~~--~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 142 QICEGMAYLHAQHYIHRDLAARNVLLDND--RLVKIGDFGLAKAVPE 186 (318)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCGGGCEECCT
T ss_pred HHHHHHHHHHhCCccCCCCchheEEEcCC--CCEEECCccccccccc
Confidence 554 889999999999999999999865 8999999999987654
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.1e-13 Score=149.22 Aligned_cols=75 Identities=17% Similarity=0.156 Sum_probs=61.0
Q ss_pred CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHH--------hcCeeccCCCCCCeEEccCCCCceEEE
Q 002927 128 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIY--------VDGFFNGDPHPGNFLVSKDPPHRPILL 197 (864)
Q Consensus 128 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~--------~~G~~H~D~hPgNIlv~~~~~g~i~Li 197 (864)
..+|||||++|.+|.++. .....+...+...+.++. +..+| ..|++|||+||+|||++.+ +.++|+
T Consensus 80 ~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~--~~~kl~ 155 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN--GQCCIA 155 (301)
T ss_dssp EEEEEECCCTTCBHHHHH--TTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTT--SCEEEC
T ss_pred eeEEehhhccCCCHHHHH--hhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCC--CCEEEe
Confidence 468999999999998875 344566666666555554 88899 9999999999999999865 899999
Q ss_pred ecccccccC
Q 002927 198 DFGLTKKLS 206 (864)
Q Consensus 198 DFG~~~~l~ 206 (864)
|||++..+.
T Consensus 156 Dfg~a~~~~ 164 (301)
T 3q4u_A 156 DLGLAVMHS 164 (301)
T ss_dssp CCTTCEEEE
T ss_pred eCCCeeecc
Confidence 999987554
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.4e-13 Score=153.39 Aligned_cols=147 Identities=18% Similarity=0.216 Sum_probs=98.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+........ ..... -.+.+|.
T Consensus 18 ~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~-----------------~~~~~--------------~~~~~E~ 66 (361)
T 2yab_A 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR-----------------RGVCR--------------EEIEREV 66 (361)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCS-----------------SSBCH--------------HHHHHHH
T ss_pred eEEeeCcCEEEEEEEECCCCCEEEEEEEEcccccccc-----------------chhHH--------------HHHHHHH
Confidence 68999999999999986 7999999997654221000 00000 0133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+.++.+ +. +.+-.++. ....+|||||++|.+|.++.. ....++...+...+.+++
T Consensus 67 ~il~~l~h------------------pnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~l~~~~~~~i~~qi~~a 127 (361)
T 2yab_A 67 SILRQVLH------------------PNIITLHDVYENRTDVVLILELVSGGELFDFLA-QKESLSEEEATSFIKQILDG 127 (361)
T ss_dssp HHHTTCCC------------------TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHT-TCSCCBHHHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------cCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHH
Confidence 44444321 11 22223333 456789999999999988753 223456666666555554
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCC--CceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPP--HRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~--g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||+||++..++. ..++|+|||++..+..
T Consensus 128 L~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~ 171 (361)
T 2yab_A 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171 (361)
T ss_dssp HHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCT
T ss_pred HHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCC
Confidence 88899999999999999999986521 2799999999987754
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.43 E-value=1.3e-13 Score=160.24 Aligned_cols=137 Identities=18% Similarity=0.192 Sum_probs=100.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+.+.... -+|.+|+
T Consensus 226 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~ 267 (495)
T 1opk_A 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------------------------------------EEFLKEA 267 (495)
T ss_dssp EESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCH--------------------------------------HHHHHHH
T ss_pred eEecCCCCeEEEEEEEcCCCeEEEEEEecCcccch--------------------------------------HHHHHHH
Confidence 67999999999999987 58999999987542110 0145577
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~ 164 (864)
+.+.++++ ++ |.+++ . ....+|||||++|.+|.++.... ...+....+...+.++
T Consensus 268 ~~l~~l~h------------------pn--iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi 327 (495)
T 1opk_A 268 AVMKEIKH------------------PN--LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 327 (495)
T ss_dssp HHHHHCCC------------------TT--BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHH
T ss_pred HHHHhcCC------------------CC--EeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHH
Confidence 66666532 11 22333 2 45678999999999998876432 2235555555555554
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+|..||+|||+||.|||++.+ +.++|+|||+++.+..
T Consensus 328 ~~~L~~LH~~~ivHrDlkp~NIll~~~--~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 328 SSAMEYLEKKNFIHRNLAARNCLVGEN--HLVKVADFGLSRLMTG 370 (495)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEECGG--GCEEECCTTCEECCTT
T ss_pred HHHHHHHHhCCcccCCCChhhEEECCC--CcEEEeecccceeccC
Confidence 4 888999999999999999999865 8999999999987643
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.43 E-value=2.1e-13 Score=150.21 Aligned_cols=140 Identities=18% Similarity=0.128 Sum_probs=96.7
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||+|++|.||+|+.. +++.||||+.+....... .-.
T Consensus 51 ~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~ 94 (344)
T 1rjb_A 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSE------------------------------------REA 94 (344)
T ss_dssp EEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------------------------------------------CHH
T ss_pred eeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHH------------------------------------HHH
Confidence 68999999999999962 467899999875422110 012
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhc----------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF---------- 150 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~---------- 150 (864)
+.+|++.+.++.. ++ .|++++. ....+|||||++|.+|.++......
T Consensus 95 ~~~E~~~l~~l~~-----------------hp--~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~ 155 (344)
T 1rjb_A 95 LMSELKMMTQLGS-----------------HE--NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYE 155 (344)
T ss_dssp HHHHHHHHHHHCC-----------------CT--TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC--------
T ss_pred HHHHHHHHHhhcC-----------------CC--CeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchh
Confidence 4456666666521 11 1333332 5678999999999999887643221
Q ss_pred ------------CCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 151 ------------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 151 ------------~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 156 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~--~~~kL~Dfg~~~~~~~ 224 (344)
T 1rjb_A 156 NQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHG--KVVKICDFGLARDIMS 224 (344)
T ss_dssp -------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETT--TEEEECCCGGGSCGGG
T ss_pred hhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCC--CcEEeCCCccCccccc
Confidence 134555555555544 888999999999999999999865 8999999999876543
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.43 E-value=2e-13 Score=146.36 Aligned_cols=144 Identities=17% Similarity=0.128 Sum_probs=93.0
Q ss_pred cccccccceeeEEEEec--CCC--EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV--DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~--~G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|++|+||+|+.. +++ .||||+.++.....- +. .-++.
T Consensus 24 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~----------------------------~~------~~~~~ 69 (291)
T 1u46_A 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQP----------------------------EA------MDDFI 69 (291)
T ss_dssp EECC----CCCEEEEEECTTSCEEEEEEEC--------C----------------------------HH------HHHHH
T ss_pred eeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCH----------------------------HH------HHHHH
Confidence 67999999999999863 344 689998765432110 00 01244
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
+|++.+.++.+. .-+.+-.++.....+++|||++|.+|.+.............+...+.+++
T Consensus 70 ~e~~~l~~l~h~-----------------~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~ 132 (291)
T 1u46_A 70 REVNAMHSLDHR-----------------NLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 132 (291)
T ss_dssp HHHHHHHHCCCT-----------------TBCCEEEEECSSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCC-----------------CcccEEEEEccCCceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHH
Confidence 566666554221 01222222235568899999999999887654444566666666655555
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 133 ~l~~lH~~~i~H~dikp~Nili~~~--~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 133 GMGYLESKRFIHRDLAARNLLLATR--DLVKIGDFGLMRALPQ 173 (291)
T ss_dssp HHHHHHHTTEECSCCCGGGEEEEET--TEEEECCCTTCEECCC
T ss_pred HHHHHHhCCcccCCCchheEEEcCC--CCEEEccccccccccc
Confidence 888999999999999999999865 8999999999887754
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=4.3e-14 Score=161.95 Aligned_cols=141 Identities=15% Similarity=0.097 Sum_probs=92.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.++..... .+ ....+.+|+
T Consensus 154 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~--------------------------------~~~~~~~e~ 199 (446)
T 4ejn_A 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA--KD--------------------------------EVAHTLTEN 199 (446)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC----------------------------------------------
T ss_pred EEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhh--hH--------------------------------HHHHHHHHH
Confidence 68999999999999976 79999999976421100 00 000122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.+++ ++. +.+-..+. ....+|||||++|.+|.+.... ...++...+...+.+++
T Consensus 200 ~~l~~l~------------------h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~a 260 (446)
T 4ejn_A 200 RVLQNSR------------------HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSA 260 (446)
T ss_dssp -CCCCCS------------------CTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHH-HSCCCHHHHHHHHHHHHHH
T ss_pred HHHHhCC------------------CCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHH
Confidence 3222211 221 11222222 4567899999999999776542 33456666555555544
Q ss_pred HHHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|. .|++|||+||+|||++.+ +.++|+|||+++...
T Consensus 261 L~~LH~~~giiHrDlkp~NIll~~~--~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 261 LDYLHSEKNVVYRDLKLENLMLDKD--GHIKITDFGLCKEGI 300 (446)
T ss_dssp HHHHHHHTCCCCCCCCGGGEEECSS--SCEEECCCCCCCTTC
T ss_pred HHHHhhcCCEEECCCCHHHEEECCC--CCEEEccCCCceecc
Confidence 888997 999999999999999865 899999999987643
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.43 E-value=6e-14 Score=153.56 Aligned_cols=138 Identities=17% Similarity=0.122 Sum_probs=92.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+...... ....+.+|+
T Consensus 8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~~~E~ 51 (324)
T 3mtl_A 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEG------------------------------------APCTAIREV 51 (324)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECC------------------------------------------CCCCCCCH
T ss_pred EEEcCCCCEEEEEEEECCCCcEEEEEEEecccccc------------------------------------cchhHHHHH
Confidence 67999999999999986 89999999886532211 011122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++++ + .|++++ . ....+|||||++| +|.+.........+...+...+.+++
T Consensus 52 ~~l~~l~h------------------~--~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~ 110 (324)
T 3mtl_A 52 SLLKDLKH------------------A--NIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLL 110 (324)
T ss_dssp HHHSCCCC------------------T--TBCCEEEEEECSSCEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHhcCC------------------C--CCCeeeeEEeeCCEEEEEeccccc-CHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 44443321 1 123333 2 5667899999987 56555433333456555555554444
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||+||+++.+ +.++|+|||++.....
T Consensus 111 ~aL~~LH~~~ivH~Dikp~NIl~~~~--~~~kl~Dfg~a~~~~~ 152 (324)
T 3mtl_A 111 RGLAYCHRQKVLHRDLKPQNLLINER--GELKLADFGLARAKSI 152 (324)
T ss_dssp HHHHHHHHTTEEESSCCGGGEEECTT--CCEEECSSSEEECC--
T ss_pred HHHHHHHHCCccCCCcCHHHEEECCC--CCEEEccCcccccccC
Confidence 888999999999999999999865 8999999999876553
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=2e-13 Score=145.57 Aligned_cols=143 Identities=14% Similarity=0.162 Sum_probs=97.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+....... .+.++.+|.
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------------~~~~~~~e~ 61 (289)
T 1x8b_A 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSV-----------------------------------DEQNALREV 61 (289)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSH-----------------------------------HHHHHHHHH
T ss_pred hhhcCCCceEEEEEEEcCCCceEEEEEecccccccH-----------------------------------HHHHHHHHH
Confidence 68999999999999986 899999999775432110 011133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh---cCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~---~~~~~~~l~~~~~ 162 (864)
..+.++. .++. |.+++ . ....+|||||++|.+|.++..... ..++...+...+.
T Consensus 62 ~~~~~l~-----------------~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~ 122 (289)
T 1x8b_A 62 YAHAVLG-----------------QHSH--VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 122 (289)
T ss_dssp HHHHHSC-----------------SCTT--BCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHhC-----------------CCCC--eeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHH
Confidence 4444431 1111 23333 2 566789999999999998865322 3356666665555
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccC-----------------CCCceEEEecccccccCh
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKD-----------------PPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~-----------------~~g~i~LiDFG~~~~l~~ 207 (864)
+++ +..+|..|++|+|+||.||+++.+ ....++|+|||++..+..
T Consensus 123 qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~ 186 (289)
T 1x8b_A 123 QVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 186 (289)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTC
T ss_pred HHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCC
Confidence 554 888999999999999999999843 124799999999887653
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.43 E-value=2.2e-13 Score=146.75 Aligned_cols=142 Identities=14% Similarity=0.137 Sum_probs=96.7
Q ss_pred cccccccceeeEEEEecC----CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLVD----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|++|.||+|+..+ +..||||+.+........ -.+.
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~------------------------------------~~~~ 74 (298)
T 3f66_A 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV------------------------------------SQFL 74 (298)
T ss_dssp EEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHH------------------------------------HHHH
T ss_pred ceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHH------------------------------------HHHH
Confidence 689999999999999652 235899987643221100 0134
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
+|++.+.++.+. .-+.+-.+.. ....+++|||++|.+|.++........+...+...+.++
T Consensus 75 ~E~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql 137 (298)
T 3f66_A 75 TEGIIMKDFSHP-----------------NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV 137 (298)
T ss_dssp HHHHHHHTCCCT-----------------TBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCC-----------------CEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHH
Confidence 455555544221 0111222221 356789999999999988865434445666666555554
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+|+.|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 138 ~~~l~~lH~~~i~H~dikp~Nil~~~~--~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 138 AKGMKYLASKKFVHRDLAARNCMLDEK--FTVKVADFGLARDMYD 180 (298)
T ss_dssp HHHHHHHHHTTCCCSCCSGGGEEECTT--CCEEECSCGGGCCCSC
T ss_pred HHHHHHHHhCCccCCCCchheEEECCC--CCEEECcccccccccc
Confidence 4 889999999999999999999865 8999999999987654
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=8.2e-14 Score=152.70 Aligned_cols=144 Identities=19% Similarity=0.228 Sum_probs=98.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+......- ....+.+|+
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------------~~~~~~~e~ 79 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQD-----------------------------------CRAEILHEI 79 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEE-----------------------------------CHHHHHHHH
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchH-----------------------------------HHHHHHHHH
Confidence 78999999999999976 799999998764321100 001133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~ 164 (864)
+.+.++.+ ++ .|++++ . ....+|||||++|.+|.++.... ...++...+...+.++
T Consensus 80 ~~l~~l~~-----------------~~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql 140 (327)
T 3lm5_A 80 AVLELAKS-----------------CP--RVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQI 140 (327)
T ss_dssp HHHHHTTT-----------------CT--TBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHH
T ss_pred HHHHhccC-----------------CC--CEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHH
Confidence 55555422 11 123333 2 45678999999999998875321 2345666666655555
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccC-CCCceEEEecccccccChH
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~~ 208 (864)
+ +..+|..|++|+|+||.||+++.. +++.++|+|||++..+...
T Consensus 141 ~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 141 LEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp HHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred HHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence 4 888999999999999999999852 1378999999999877543
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=99.43 E-value=8.2e-14 Score=167.72 Aligned_cols=139 Identities=14% Similarity=0.115 Sum_probs=94.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+...... + -.. -.+..|.
T Consensus 347 ~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~---~-----------------~~~--------------~~~~~E~ 392 (674)
T 3pfq_A 347 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ---D-----------------DDV--------------ECTMVEK 392 (674)
T ss_dssp EESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHH---T-----------------TTT--------------HHHHHHH
T ss_pred EEEccCCCEEEEEEEECCCCcEEEEEEEecccccc---H-----------------HHH--------------HHHHHHH
Confidence 67999999999999976 79999999976321100 0 000 0122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+..+. .++ .|..++. ....+|||||++|.+|.++... ...++...+...+.+++
T Consensus 393 ~~l~~~~-----------------~~~--~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~ 452 (674)
T 3pfq_A 393 RVLALPG-----------------KPP--FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-VGRFKEPHAVFYAAEIA 452 (674)
T ss_dssp HHHTCTT-----------------CCT--TBCCEEEECBCSSEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHH
T ss_pred HHHHhcc-----------------CCC--eEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHh-cCCCCHHHHHHHHHHHH
Confidence 3322211 111 1233332 3456899999999999877543 23466666555555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..||+||||||+|||++.+ |.++|+|||+++..
T Consensus 453 ~aL~~LH~~gIiHrDLKp~NILl~~~--g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 453 IGLFFLQSKGIIYRDLKLDNVMLDSE--GHIKIADFGMCKEN 492 (674)
T ss_dssp HHHHHHHHTSEECCCCCSTTEEECSS--SCEEECCCTTCEEC
T ss_pred HHHHHHHhCCeEeccCChhhEEEcCC--CcEEEeecceeecc
Confidence 889999999999999999999865 89999999998853
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=7.9e-14 Score=152.63 Aligned_cols=140 Identities=14% Similarity=0.149 Sum_probs=95.4
Q ss_pred cccccccceeeEEEEec-CCCE----EEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV-DGRQ----VVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~----VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||+|++|.||+|+.. +|+. ||+|+........ ....+
T Consensus 19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~------------------------------------~~~~~ 62 (325)
T 3kex_A 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQ------------------------------------SFQAV 62 (325)
T ss_dssp EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCS------------------------------------CBCSC
T ss_pred eeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHH------------------------------------HHHHH
Confidence 68999999999999975 6665 7777654321100 01123
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
.+|+..+.++.+ + .|.+++. ....++||||++|.+|.+........++...+...+.
T Consensus 63 ~~e~~~l~~l~h------------------~--~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 122 (325)
T 3kex_A 63 TDHMLAIGSLDH------------------A--HIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGV 122 (325)
T ss_dssp CHHHHHHHTCCC------------------T--TBCCEEEEECBSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHH
T ss_pred HHHHHHHhcCCC------------------C--CcCeEEEEEcCCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHH
Confidence 345555444321 1 1333332 5667899999999999887643333445455555444
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+++ +..+|..|++|||+||+|||++.+ ++++|+|||+++.+...
T Consensus 123 qi~~~l~~lH~~~ivH~Dikp~Nil~~~~--~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 123 QIAKGMYYLEEHGMVHRNLAARNVLLKSP--SQVQVADFGVADLLPPD 168 (325)
T ss_dssp HHHHHHHHHHHTTCCCSCCSSTTEEESSS--SCEEECSCSGGGGSCCC
T ss_pred HHHHHHHHHHhCCCCCCccchheEEECCC--CeEEECCCCcccccCcc
Confidence 443 889999999999999999999865 89999999999877543
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.2e-13 Score=154.64 Aligned_cols=138 Identities=17% Similarity=0.111 Sum_probs=90.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+......-. .+..+..|.
T Consensus 44 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~----------------------------------~~~~~~~e~ 89 (373)
T 2r5t_A 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKK----------------------------------EEKHIMSER 89 (373)
T ss_dssp EEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC----------------------------------------------
T ss_pred EEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhH----------------------------------HHHHHHHHH
Confidence 78999999999999987 7999999997643211000 000011111
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+ +. ...++ .|.+++. ....+|||||++|.+|.+.... ...+....+...+.+++
T Consensus 90 ~~l------l~-----------~~~hp--~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~ 149 (373)
T 2r5t_A 90 NVL------LK-----------NVKHP--FLVGLHFSFQTADKLYFVLDYINGGELFYHLQR-ERCFLEPRARFYAAEIA 149 (373)
T ss_dssp -CC------BC-----------CCCCT--TBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHH
T ss_pred HHH------HH-----------hCCCC--CCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHH
Confidence 110 00 00122 2333332 4567899999999999877542 23455555544444443
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+..+|..|++|||+||+|||++.+ |.++|+|||+++.
T Consensus 150 ~aL~~LH~~givHrDlkp~NIll~~~--g~ikL~DFG~a~~ 188 (373)
T 2r5t_A 150 SALGYLHSLNIVYRDLKPENILLDSQ--GHIVLTDFGLCKE 188 (373)
T ss_dssp HHHHHHHHTTCCCCCCCGGGEEECTT--SCEEECCCCBCGG
T ss_pred HHHHHHHHCCceecCCCHHHEEECCC--CCEEEeeCccccc
Confidence 888999999999999999999865 8999999999875
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=99.43 E-value=2.3e-13 Score=150.44 Aligned_cols=137 Identities=17% Similarity=0.202 Sum_probs=94.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||+.+.... +..+|.
T Consensus 28 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----------------------------------------~~~~E~ 66 (342)
T 2qr7_A 28 EDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----------------------------------------DPTEEI 66 (342)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-----------------------------------------CCHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-----------------------------------------ChHHHH
Confidence 68999999999999986 799999999764321 112244
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.. ++. +.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 67 ~~l~~~~~-----------------hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~-~~~~~~~~~~~~~~~qi~~a 128 (342)
T 2qr7_A 67 EILLRYGQ-----------------HPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL-RQKFFSEREASAVLFTITKT 128 (342)
T ss_dssp HHHHHHTT-----------------STTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-TCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcC-----------------CCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 44444311 111 22223333 455789999999999887653 223456666555555544
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCC--CceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPP--HRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~--g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|||+||+|||+..+.+ +.++|+|||++..+.
T Consensus 129 l~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 129 VEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp HHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred HHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 88899999999999999999864311 359999999998664
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=99.43 E-value=2.5e-13 Score=152.51 Aligned_cols=141 Identities=14% Similarity=0.117 Sum_probs=98.7
Q ss_pred cccccc--cceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 11 TPLATA--SIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 11 ~plasa--SigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
+.||+| ++|.||+|+.+ +|+.||||+.+...... + ..+ .+.+
T Consensus 31 ~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~--------------------------~~~------~~~~ 75 (389)
T 3gni_B 31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSN---E--------------------------MVT------FLQG 75 (389)
T ss_dssp EEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCH---H--------------------------HHH------HHHH
T ss_pred ecccCCcCCceEEEEEEEcCCCCEEEEEEecccccCh---H--------------------------HHH------HHHH
Confidence 679999 99999999987 89999999986532111 0 000 1334
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHHH
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY 165 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~~ 165 (864)
|++.+.++.+. .-+.+-.++. ....+|||||++|.+|.++.... ...++...+...+.+++
T Consensus 76 E~~~l~~l~h~-----------------niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~ 138 (389)
T 3gni_B 76 ELHVSKLFNHP-----------------NIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVL 138 (389)
T ss_dssp HHHHHHHCCCT-----------------TBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHhCCCC-----------------CCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHH
Confidence 56555554321 0122222222 56678999999999999876432 13456666665555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|..|++|||+||+|||++.+ +.++|+|||++..+
T Consensus 139 ~~l~~LH~~~ivHrDlkp~NIll~~~--~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 139 KALDYIHHMGYVHRSVKASHILISVD--GKVYLSGLRSNLSM 178 (389)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEECTT--CCEEECCGGGCEEC
T ss_pred HHHHHHHhCCeecCCCCHHHEEEcCC--CCEEEcccccceee
Confidence 889999999999999999999865 89999999987654
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=2e-13 Score=146.27 Aligned_cols=139 Identities=16% Similarity=0.164 Sum_probs=98.5
Q ss_pred cccccccceeeEEEEec-CC-------CEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhh
Q 002927 11 TPLATASIAQVHRATLV-DG-------RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 82 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G-------~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 82 (864)
+.||+|++|.||+|+.+ +| +.||||+.+.......
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~------------------------------------- 56 (289)
T 4fvq_A 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYS------------------------------------- 56 (289)
T ss_dssp EEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGH-------------------------------------
T ss_pred eeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHH-------------------------------------
Confidence 68999999999999976 44 5799998764321100
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHH
Q 002927 83 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 158 (864)
Q Consensus 83 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~ 158 (864)
-.+.+|++.+.++++ + .|.+++. ....++||||++|.+|.++........+...+.
T Consensus 57 ~~~~~E~~~l~~l~h------------------~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 116 (289)
T 4fvq_A 57 ESFFEAASMMSKLSH------------------K--HLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKL 116 (289)
T ss_dssp HHHHHHHHHHHTSCC------------------T--TBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHH
T ss_pred HHHHHHHHHHHhCCC------------------C--CEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHH
Confidence 013445555554422 1 1233332 466789999999999998865444346666655
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCc--------eEEEecccccccChH
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHR--------PILLDFGLTKKLSSS 208 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~--------i~LiDFG~~~~l~~~ 208 (864)
..+.+++ +..+|+.|++|+|+||+||+++.+ +. ++|+|||++......
T Consensus 117 ~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~--~~~~~~~~~~~kl~Dfg~~~~~~~~ 174 (289)
T 4fvq_A 117 EVAKQLAAAMHFLEENTLIHGNVCAKNILLIRE--EDRKTGNPPFIKLSDPGISITVLPK 174 (289)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEEC--CBGGGTBCCEEEECCCCSCTTTSCH
T ss_pred HHHHHHHHHHHHHhhCCeECCCcCcceEEEecC--CcccccccceeeeccCcccccccCc
Confidence 5555544 888999999999999999999876 44 999999999876554
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.8e-13 Score=148.55 Aligned_cols=136 Identities=15% Similarity=0.210 Sum_probs=95.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+.... .. ++.+|+
T Consensus 35 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-------------------------~~--------------~~~~e~ 75 (314)
T 3com_A 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-------------------------LQ--------------EIIKEI 75 (314)
T ss_dssp EECC----CEEEEEEETTTCCEEEEEEEETTSC-------------------------CH--------------HHHHHH
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEecCchHH-------------------------HH--------------HHHHHH
Confidence 67999999999999986 699999998764211 00 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ + .|++++ . ....+|||||++|.+|.++.......++...+...+.+++
T Consensus 76 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~ 135 (314)
T 3com_A 76 SIMQQCDS------------------P--HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTL 135 (314)
T ss_dssp HHHHTCCC------------------T--TBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------C--CCccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 44444321 1 123333 2 4567899999999999988765555667766666665554
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 136 ~~l~~lH~~~i~H~dl~p~Nil~~~~--~~~kl~dfg~~~~~~~ 177 (314)
T 3com_A 136 KGLEYLHFMRKIHRDIKAGNILLNTE--GHAKLADFGVAGQLTD 177 (314)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEECTT--CCEEECCCTTCEECBT
T ss_pred HHHHHHHhCCCcCCCcCHHHEEECCC--CCEEEeecccchhhhh
Confidence 888999999999999999999865 8999999999876654
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=99.42 E-value=1.2e-13 Score=153.23 Aligned_cols=136 Identities=21% Similarity=0.211 Sum_probs=96.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.+......... .+.+|+
T Consensus 39 ~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~------------------------------------~~~~E~ 82 (360)
T 3eqc_A 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN------------------------------------QIIREL 82 (360)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHH------------------------------------HHHHHH
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHH------------------------------------HHHHHH
Confidence 67999999999999986 79999999987654322111 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ + .|++++ . ....+|||||++|.+|.++... ....+...+...+.+++
T Consensus 83 ~~l~~l~h------------------~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~~i~ 141 (360)
T 3eqc_A 83 QVLHECNS------------------P--YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVI 141 (360)
T ss_dssp GGGGGCCC------------------T--TBCCEEEEEEETTEEEEEECCCTTCBHHHHHHH-HSSCCHHHHHHHHHHHH
T ss_pred HHHHHCCC------------------C--CEEEEeEEEEECCEEEEEEECCCCCCHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 43333311 1 123333 2 4567899999999999887643 23455555555554444
Q ss_pred --HHHHHhc-CeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 --AHQIYVD-GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 --l~~i~~~-G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
+..+|.. |++|+|+||.||+++.+ +.++|+|||++..+
T Consensus 142 ~~l~~lh~~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~ 182 (360)
T 3eqc_A 142 KGLTYLREKHKIMHRDVKPSNILVNSR--GEIKLCDFGVSGQL 182 (360)
T ss_dssp HHHHHHHHHHCCCCSCCSGGGEEECTT--CCEEECCCCCCHHH
T ss_pred HHHHHHHHhCCEEcCCccHHHEEECCC--CCEEEEECCCCccc
Confidence 7788985 99999999999999865 89999999998654
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.7e-13 Score=147.25 Aligned_cols=139 Identities=19% Similarity=0.248 Sum_probs=96.7
Q ss_pred cccccccceeeEEEEe--c-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 11 TPLATASIAQVHRATL--V-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 11 ~plasaSigqV~~A~l--~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
+.||+|++|.||+|+. + +++.||||+.+....... ..+ .+.+
T Consensus 23 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------~~~------~~~~ 67 (291)
T 1xbb_A 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPA-----------------------------LKD------ELLA 67 (291)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CH-----------------------------HHH------HHHH
T ss_pred CccccccCeeeEeeeecCCCceeeEEEEeecccccCHH-----------------------------HHH------HHHH
Confidence 4899999999999964 2 578999999875421100 000 1344
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---ecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
|++.+.++.+ + .|++++ .....++||||++|.+|.++... ....+...+...+.++
T Consensus 68 e~~~l~~l~h------------------~--~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi 126 (291)
T 1xbb_A 68 EANVMQQLDN------------------P--YIVRMIGICEAESWMLVMEMAELGPLNKYLQQ-NRHVKDKNIIELVHQV 126 (291)
T ss_dssp HHHHHHTCCC------------------T--TBCCEEEEEESSSEEEEEECCTTEEHHHHHHH-CTTCCHHHHHHHHHHH
T ss_pred HHHHHHhCCC------------------C--CEEEEEEEECCCCcEEEEEeCCCCCHHHHHHh-CcCCCHHHHHHHHHHH
Confidence 5555554422 1 122333 35667899999999999887642 2336666666655555
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 127 ~~~l~~LH~~~i~H~dikp~Nil~~~~--~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 127 SMGMKYLEESNFVHRDLAARNVLLVTQ--HYAKISDFGLSKALRA 169 (291)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEEEET--TEEEECCCTTCEECCT
T ss_pred HHHHHHHHhCCeEcCCCCcceEEEeCC--CcEEEccCCcceeecc
Confidence 4 888999999999999999999975 8999999999987654
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.9e-13 Score=148.22 Aligned_cols=139 Identities=17% Similarity=0.176 Sum_probs=97.1
Q ss_pred cccccccceeeEEEEe------cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATL------VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l------~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||+|++|.||+|+. .+|+.||||+.+........ + +
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~---~---------------------------------~ 72 (314)
T 2ivs_A 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL---R---------------------------------D 72 (314)
T ss_dssp EEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHH---H---------------------------------H
T ss_pred eeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHH---H---------------------------------H
Confidence 6799999999999986 24689999998764322110 0 1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhc----------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF---------- 150 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~---------- 150 (864)
+.+|++.+.++++ + .|.+++. ....++||||++|.+|.++......
T Consensus 73 ~~~E~~~l~~l~h------------------p--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 132 (314)
T 2ivs_A 73 LLSEFNVLKQVNH------------------P--HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132 (314)
T ss_dssp HHHHHHHHTTCCC------------------T--TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----
T ss_pred HHHHHHHHhhCCC------------------C--ceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccc
Confidence 3345555444321 1 1333332 5668999999999999888653211
Q ss_pred -------------CCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 151 -------------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 151 -------------~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.++...+...+.+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++..+..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~--~~~kl~Dfg~~~~~~~ 202 (314)
T 2ivs_A 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEG--RKMKISDFGLSRDVYE 202 (314)
T ss_dssp ------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT--TEEEECCCTTCEECTT
T ss_pred cccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCC--CCEEEccccccccccc
Confidence 144555555555544 888999999999999999999865 8999999999886643
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.42 E-value=9.9e-14 Score=153.30 Aligned_cols=143 Identities=17% Similarity=0.188 Sum_probs=91.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+.......... ..-.+.+|+
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~--------------------------------~~~~~~~E~ 63 (346)
T 1ua2_A 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDG--------------------------------INRTALREI 63 (346)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC--------------------------------------------CTHHHHHH
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhh--------------------------------hhHHHHHHH
Confidence 68999999999999976 799999998765332110000 011244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.+ +. +.+-.++. ....+|||||++| +|.+........++...+...+.+++
T Consensus 64 ~~l~~l~h------------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~ 124 (346)
T 1ua2_A 64 KLLQELSH------------------PNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQG 124 (346)
T ss_dssp HHHHHCCC------------------TTBCCEEEEECCTTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHH
T ss_pred HHHhhCCC------------------CCCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHH
Confidence 65555432 11 12222222 5678999999997 55554332222244444444444433
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 125 l~~lH~~~ivH~Dlkp~Nil~~~~--~~~kl~Dfg~a~~~~ 163 (346)
T 1ua2_A 125 LEYLHQHWILHRDLKPNNLLLDEN--GVLKLADFGLAKSFG 163 (346)
T ss_dssp HHHHHHTTCCCCCCCGGGEEECTT--CCEEECCCGGGSTTT
T ss_pred HHHHHHCCEECCCCCHHHEEEcCC--CCEEEEecccceecc
Confidence 888999999999999999999865 899999999988764
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=6.2e-13 Score=149.01 Aligned_cols=144 Identities=17% Similarity=0.151 Sum_probs=94.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+..-.. . . .+..|.
T Consensus 60 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~------------------------------~------~~~~e~ 101 (382)
T 2vx3_A 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAF--L------------------------------N------QAQIEV 101 (382)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSSHHH--H------------------------------H------HHHHHH
T ss_pred EEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHH--H------------------------------H------HHHHHH
Confidence 68999999999999976 7899999998753210 0 0 022344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~ 164 (864)
+.++.+.+.- ......+.+++ . ....+|||||++| +|.++..... .+++...+...+.++
T Consensus 102 ~~l~~l~~~~--------------~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi 166 (382)
T 2vx3_A 102 RLLELMNKHD--------------TEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQM 166 (382)
T ss_dssp HHHHHHHHCS--------------SGGGGGBCCEEEEEEETTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHH
T ss_pred HHHHHHHhcc--------------cccceeEEEeeeeeccCCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHH
Confidence 4555554310 00011122332 2 5667899999987 7777654322 235555554444444
Q ss_pred H--HHHHH--hcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIY--VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~--~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+| ..||+|||+||+|||+..+.++.++|+|||++..+..
T Consensus 167 ~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~ 213 (382)
T 2vx3_A 167 CTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 213 (382)
T ss_dssp HHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred HHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceeccc
Confidence 3 66777 5799999999999999754458899999999987643
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.42 E-value=8.1e-14 Score=166.07 Aligned_cols=142 Identities=20% Similarity=0.227 Sum_probs=99.6
Q ss_pred ccccccceeeEEEEec---CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 12 PLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 12 plasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.||+|+||.||+|+.+ ++..||||+.+.+..... .-+|.+|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~------------------------------------~~~~~~E 386 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKAD------------------------------------TEEMMRE 386 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTT------------------------------------HHHHHHH
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHH------------------------------------HHHHHHH
Confidence 6999999999999874 567899999876532110 0014456
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
++.+.++++. .-+.+-.++.....+|||||++|.+|.++.......++...+...+.+++ +
T Consensus 387 ~~il~~l~hp-----------------niv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L 449 (613)
T 2ozo_A 387 AQIMHQLDNP-----------------YIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGM 449 (613)
T ss_dssp HHHHTTCCCT-----------------TBCCEEEEEESSSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCC-----------------CEeeEEEEeccCCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence 6655554221 01112222225567899999999999887543334466666666665554 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
..+|..||+|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 450 ~~LH~~~iiHrDlkp~NILl~~~--~~vkL~DFGla~~~~~~ 489 (613)
T 2ozo_A 450 KYLEEKNFVHRNLAARNVLLVNR--HYAKISDFGLSKALGAD 489 (613)
T ss_dssp HHHHHTTCCCSCCSGGGEEEEET--TEEEECCCSTTTTCC--
T ss_pred HHHHHCCEEcCcCCHHHEEEcCC--CcEEEeeccCcccccCC
Confidence 89999999999999999999965 89999999999887643
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.4e-13 Score=150.14 Aligned_cols=137 Identities=19% Similarity=0.162 Sum_probs=85.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+...... .. -.+.+|+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------~~--------------~~~~~E~ 54 (317)
T 2pmi_A 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEG----------------------TP--------------STAIREI 54 (317)
T ss_dssp --------CEEEEEECSSSCCEEEEEEEECCSTTC----------------------SC--------------HHHHHHH
T ss_pred eEECCCCCEEEEEEEECCCCcEEEEEEeecccccc----------------------cH--------------HHHHHHH
Confidence 67999999999999976 79999999876432110 00 0123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh-----cCCCHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-----FGVNKQKVVEE 160 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~-----~~~~~~~l~~~ 160 (864)
+.+.++++ + .|.+++. ....+|||||++| +|.++..... .+++...+...
T Consensus 55 ~~l~~l~h------------------p--~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~ 113 (317)
T 2pmi_A 55 SLMKELKH------------------E--NIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYF 113 (317)
T ss_dssp HHHTTCCB------------------T--TBCCEEEEECCTTEEEEEEECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHH
T ss_pred HHHHhcCC------------------C--CcceEEEEEEECCeEEEEEEecCC-CHHHHHHhccccccccCCCHHHHHHH
Confidence 44443321 1 1233332 4557899999997 6666544322 23455544444
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+.+++ +..+|..|++|+|+||+||+++.+ |+++|+|||++..+.
T Consensus 114 ~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~--~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 114 QWQLLQGLAFCHENKILHRDLKPQNLLINKR--GQLKLGDFGLARAFG 159 (317)
T ss_dssp HHHHHHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCSSCEETT
T ss_pred HHHHHHHHHHHHHCCeeeCCCChHHeEEcCC--CCEEECcCccceecC
Confidence 43433 788999999999999999999865 899999999987654
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.42 E-value=1.4e-13 Score=149.47 Aligned_cols=139 Identities=17% Similarity=0.194 Sum_probs=97.0
Q ss_pred cccccccceeeEEEEe------cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATL------VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l------~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||+|++|.||+|+. .+|+.||||+.+........ -.
T Consensus 33 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~ 76 (316)
T 2xir_A 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH------------------------------------RA 76 (316)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHH------------------------------------HH
T ss_pred eEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHH------------------------------------HH
Confidence 6899999999999984 25789999998765332110 01
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e--cCCceEEEeecCCcCCCChHHHhhcC--------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q--SSETVLILEFMDGIRLNDCESLEAFG-------- 151 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~--~~~~vLvmE~i~G~~L~~~~~~~~~~-------- 151 (864)
+.+|++.+.++.+ ++. |.+++ . ....+++|||++|.+|.++.......
T Consensus 77 ~~~E~~~l~~l~~-----------------hp~--iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 137 (316)
T 2xir_A 77 LMSELKILIHIGH-----------------HLN--VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP 137 (316)
T ss_dssp HHHHHHHHHHHCC-----------------CTT--BCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC----
T ss_pred HHHHHHHHHhccc-----------------CCC--eeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccc
Confidence 4456666666521 111 22333 2 23478999999999998875432211
Q ss_pred -------CCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 152 -------VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 152 -------~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
++...+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 138 ~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~--~~~kl~Dfg~~~~~~ 199 (316)
T 2xir_A 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLARDIY 199 (316)
T ss_dssp ---CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG--GCEEECCCGGGSCTT
T ss_pred hhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCC--CCEEECCCccccccc
Confidence 34455555544444 788999999999999999999865 899999999997654
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.8e-13 Score=149.25 Aligned_cols=142 Identities=22% Similarity=0.256 Sum_probs=87.3
Q ss_pred cccccccceeeEEEEec-CCC---EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV-DGR---QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~---~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|++|.||+|+.+ +++ .||||+.++.....- +. -.+.
T Consensus 29 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~--~~---------------------------------~~~~ 73 (323)
T 3qup_A 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASS--DI---------------------------------EEFL 73 (323)
T ss_dssp EEEEEETTEEEEEEEC-------CEEEEEEC------CH--HH---------------------------------HHHH
T ss_pred ceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHH--HH---------------------------------HHHH
Confidence 68999999999999976 343 899999765432110 00 0144
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCc------eEEEeecCCcCCCChHHHhhc-----CCC
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSET------VLILEFMDGIRLNDCESLEAF-----GVN 153 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~------vLvmE~i~G~~L~~~~~~~~~-----~~~ 153 (864)
+|++.+.++.+ +. +.+-.++. .... +++|||++|.+|.++...... .++
T Consensus 74 ~E~~~l~~l~h------------------~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~ 135 (323)
T 3qup_A 74 REAACMKEFDH------------------PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLP 135 (323)
T ss_dssp HHHHHHTTCCC------------------TTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCC
T ss_pred HHHHHHHHCCC------------------CceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccC
Confidence 56655554422 11 11112222 2222 899999999999887653321 355
Q ss_pred HHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 154 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 154 ~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 136 ~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~--~~~kl~Dfg~a~~~~~ 189 (323)
T 3qup_A 136 LQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAED--MTVCVADFGLSRKIYS 189 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT--SCEEECCCCC------
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCC--CCEEEeeccccccccc
Confidence 566655555544 888999999999999999999865 8999999999987644
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.42 E-value=1.6e-13 Score=150.50 Aligned_cols=139 Identities=18% Similarity=0.173 Sum_probs=94.5
Q ss_pred cccccccceeeEEEEec-CCCE----EEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV-DGRQ----VVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~----VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||+|++|.||+|+.. +|+. ||||+.+...... ..-.|
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~ 64 (327)
T 3poz_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK------------------------------------ANKEI 64 (327)
T ss_dssp EEEEEETTEEEEEEEECC----CCEEEEEEEC-------------------------------------------CHHHH
T ss_pred eEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHH------------------------------------HHHHH
Confidence 68999999999999965 6665 4777654322110 01124
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---ecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
.+|++.+.++++ + .|.+++ .....+++|||++|.+|.+........+....+...+.
T Consensus 65 ~~E~~~l~~l~h------------------~--~iv~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~ 124 (327)
T 3poz_A 65 LDEAYVMASVDN------------------P--HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124 (327)
T ss_dssp HHHHHHHHHCCB------------------T--TBCCEEEEEESSSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHH
T ss_pred HHHHHHHHhCCC------------------C--CEeEEEEEEecCCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHH
Confidence 556666666532 1 123333 25667899999999999887654444566666666555
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+++ +..+|+.|++|||+||.|||++.+ +.++|+|||+++.+..
T Consensus 125 qi~~~l~~LH~~~ivH~Dikp~NIll~~~--~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 169 (327)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEEEET--TEEEECCTTHHHHHTT
T ss_pred HHHHHHHHHhhCCeeCCCCChheEEECCC--CCEEEccCcceeEccC
Confidence 554 889999999999999999999875 8999999999876643
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.42 E-value=1e-13 Score=153.14 Aligned_cols=149 Identities=19% Similarity=0.263 Sum_probs=95.1
Q ss_pred cccccccceeeEEEEec----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|++|.||+|+.. +++.||||+....... ...+.++++.+. .-++.
T Consensus 43 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~e~~~~~~~~-------------------------~~~~~ 96 (345)
T 2v62_A 43 KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGP-LFSELKFYQRVA-------------------------KKDCI 96 (345)
T ss_dssp EEC------CEEEEEESSSCGGGCCEEEEEEECC-CH-HHHHHHHHHHHC-------------------------CHHHH
T ss_pred eeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcc-hHHHHHHHHHHh-------------------------hhHHH
Confidence 68999999999999975 5789999998765332 223333222211 11233
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 158 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~ 158 (864)
+|...+..+. ...|++++. ....+|||||+ |.+|.++..... .++...+.
T Consensus 97 ~e~~~~~~l~--------------------h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~ 154 (345)
T 2v62_A 97 KKWIERKQLD--------------------YLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVL 154 (345)
T ss_dssp HHHHHHHTCS--------------------CCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHH
T ss_pred HHHHhhcccc--------------------ccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHH
Confidence 4444433321 122344442 23468999999 999988754322 56666666
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+.+++ +..+|..|++|||+||.|||++.+..++++|+|||+++.+..
T Consensus 155 ~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~ 205 (345)
T 2v62_A 155 QLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCP 205 (345)
T ss_dssp HHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSG
T ss_pred HHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceeccc
Confidence 6666555 889999999999999999999876334999999999987654
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=99.42 E-value=1.1e-13 Score=148.96 Aligned_cols=80 Identities=20% Similarity=0.290 Sum_probs=61.7
Q ss_pred CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 127 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
...++||||++|.+|.++........+...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~--~~~kl~dfg~~~~ 165 (303)
T 1zy4_A 88 STLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDES--RNVKIGDFGLAKN 165 (303)
T ss_dssp EEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT--SCEEECCCCCCSC
T ss_pred CceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCC--CCEEEeeCcchhh
Confidence 346899999999999988653333344555555444443 788999999999999999999865 8999999999987
Q ss_pred cChH
Q 002927 205 LSSS 208 (864)
Q Consensus 205 l~~~ 208 (864)
+...
T Consensus 166 ~~~~ 169 (303)
T 1zy4_A 166 VHRS 169 (303)
T ss_dssp TTC-
T ss_pred cccc
Confidence 7543
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.42 E-value=1.9e-13 Score=144.90 Aligned_cols=146 Identities=18% Similarity=0.224 Sum_probs=92.3
Q ss_pred cccc-ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 6 MDFV-ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 6 ~~fd-~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
.+|. .+.||+|++|.||+|+. .|+.||||+.+........... + .
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~---------------------------~------~ 52 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTI---------------------------E------N 52 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CH---------------------------H------H
T ss_pred hheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHH---------------------------H------H
Confidence 3443 37899999999999997 5899999997654322111000 0 1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHH
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 160 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 160 (864)
+.+|++.+.++++ + .|++++. ....++||||++|.+|.++. .....+...+...
T Consensus 53 ~~~e~~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~i 110 (271)
T 3dtc_A 53 VRQEAKLFAMLKH------------------P--NIIALRGVCLKEPNLCLVMEFARGGPLNRVL--SGKRIPPDILVNW 110 (271)
T ss_dssp HHHHHHHHHHCCC------------------T--TBCCEEEEECCC--CEEEEECCTTEEHHHHH--TSSCCCHHHHHHH
T ss_pred HHHHHHHHHhcCC------------------C--CEeeEEEEEecCCceEEEEEcCCCCCHHHHh--hcCCCCHHHHHHH
Confidence 3445555554422 1 1233332 45678999999999998774 3445666666665
Q ss_pred HHHHH--HHHHHhcC---eeccCCCCCCeEEccC------CCCceEEEecccccccCh
Q 002927 161 ITRAY--AHQIYVDG---FFNGDPHPGNFLVSKD------PPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 161 ~~~~~--l~~i~~~G---~~H~D~hPgNIlv~~~------~~g~i~LiDFG~~~~l~~ 207 (864)
+.+++ +..+|+.| ++|+|+||+||+++.+ .++.++|+|||++..+..
T Consensus 111 ~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~ 168 (271)
T 3dtc_A 111 AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR 168 (271)
T ss_dssp HHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC------
T ss_pred HHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccccccc
Confidence 55554 88899999 9999999999999852 137899999999876544
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.42 E-value=2.6e-13 Score=155.68 Aligned_cols=138 Identities=22% Similarity=0.221 Sum_probs=98.0
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|+. .|+.||||+.+.+... -+|.+|++
T Consensus 199 ~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~~~---------------------------------------~~~~~E~~ 238 (450)
T 1k9a_A 199 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA---------------------------------------QAFLAEAS 238 (450)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESSCTTS---------------------------------------HHHHHHHH
T ss_pred eeecCcCCeeEEEEEe-cCCeEEEEEeCCchHH---------------------------------------HHHHHHHH
Confidence 6899999999999997 5889999998754210 01445666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcC-CCHHHHHHHHHHHH--
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITRAY-- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~-~~~~~l~~~~~~~~-- 165 (864)
.+.++++. .-+.+-.+.. ....+|||||++|.+|.++....... +....+...+.+++
T Consensus 239 ~l~~l~h~-----------------niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~ 301 (450)
T 1k9a_A 239 VMTQLRHS-----------------NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 301 (450)
T ss_dssp HHHTCCCT-----------------TBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHH
T ss_pred HHHhccCC-----------------CEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 66655321 0122222222 23578999999999999886533222 45555555555544
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||.|||++.+ +.++|+|||+++....
T Consensus 302 l~~LH~~~ivHrDlkp~Nill~~~--~~~kl~DfG~a~~~~~ 341 (450)
T 1k9a_A 302 MEYLEGNNFVHRDLAARNVLVSED--NVAKVSDFGLTKEASS 341 (450)
T ss_dssp HHHHHHTTEECSCCCGGGEEECTT--SCEEECCCTTCEECC-
T ss_pred HHHHHhCCeeCCCCCHhhEEECCC--CCEEEeeCCCcccccc
Confidence 888999999999999999999865 8999999999986543
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=99.42 E-value=1.7e-13 Score=155.66 Aligned_cols=150 Identities=19% Similarity=0.221 Sum_probs=100.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+..+.....-. .........+.+|+
T Consensus 141 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~-----------------------------~~~~~~~~~~~~E~ 191 (419)
T 3i6u_A 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGS-----------------------------AREADPALNVETEI 191 (419)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC-------------------------------------CCHHHHH
T ss_pred eEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccc-----------------------------cccchhHHHHHHHH
Confidence 56999999999999976 7999999997643210000 00001123466777
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~ 167 (864)
+.+.++.+.. -+.+-.++.....+|||||++|.+|.+... ....+....+...+.+++ +.
T Consensus 192 ~~l~~l~hpn-----------------iv~l~~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~ 253 (419)
T 3i6u_A 192 EILKKLNHPC-----------------IIKIKNFFDAEDYYIVLELMEGGELFDKVV-GNKRLKEATCKLYFYQMLLAVQ 253 (419)
T ss_dssp HHHHHCCCTT-----------------BCCCCEEEESSEEEEEEECCTTCBGGGGTS-SSCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCC-----------------EeeEEEEEecCceEEEEEcCCCCcHHHHHh-ccCCCCHHHHHHHHHHHHHHHH
Confidence 7777663311 111222233556789999999999987643 223455555555554444 88
Q ss_pred HHHhcCeeccCCCCCCeEEccCC-CCceEEEecccccccCh
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSS 207 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~ 207 (864)
.+|..|++|||+||.|||++.++ ++.++|+|||+++.+..
T Consensus 254 ~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~ 294 (419)
T 3i6u_A 254 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 294 (419)
T ss_dssp HHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-
T ss_pred HHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCC
Confidence 89999999999999999997531 25699999999988764
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=2.9e-13 Score=146.43 Aligned_cols=140 Identities=15% Similarity=0.144 Sum_probs=97.1
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|+. +|+.||||+.+......-. +..+ .+.+|++
T Consensus 37 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~---------------------------~~~~------~~~~E~~ 82 (307)
T 2nru_A 37 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTE---------------------------ELKQ------QFDQEIK 82 (307)
T ss_dssp CEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTT---------------------------THHH------HHHHHHH
T ss_pred CccccCCCeEEEEEEE-CCceEEEEEEecccCcchH---------------------------HHHH------HHHHHHH
Confidence 6899999999999996 7899999987654310000 0000 1344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh--cCCCHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITRA 164 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~--~~~~~~~l~~~~~~~ 164 (864)
.+.++++ + .|++++. ....+++|||++|.+|.++..... ...+...+...+.++
T Consensus 83 ~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i 142 (307)
T 2nru_A 83 VMAKCQH------------------E--NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGA 142 (307)
T ss_dssp HHHHCCC------------------T--TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHH
T ss_pred HHHhcCC------------------C--CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHH
Confidence 5555422 1 1333332 456899999999999988754222 235555555555444
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+ +..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 143 ~~~l~~lH~~~i~H~dlkp~Nili~~~--~~~kl~Dfg~~~~~~ 184 (307)
T 2nru_A 143 ANGINFLHENHHIHRDIKSANILLDEA--FTAKISDFGLARASE 184 (307)
T ss_dssp HHHHHHHHHTTEECSCCCGGGEEECTT--CCEEECCCTTCEECC
T ss_pred HHHHHHHhcCCeecCCCCHHHEEEcCC--CcEEEeecccccccc
Confidence 4 888999999999999999999865 899999999987654
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.3e-13 Score=150.81 Aligned_cols=75 Identities=21% Similarity=0.202 Sum_probs=60.6
Q ss_pred ceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhc----------CeeccCCCCCCeEEccCCCCceEE
Q 002927 129 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVD----------GFFNGDPHPGNFLVSKDPPHRPIL 196 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~----------G~~H~D~hPgNIlv~~~~~g~i~L 196 (864)
.+|||||++|.+|.++.. ...+....+...+.++. +..+|.. |++|+|+||+|||++.+ +.++|
T Consensus 97 ~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~--~~~kL 172 (322)
T 3soc_A 97 LWLITAFHEKGSLSDFLK--ANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNN--LTACI 172 (322)
T ss_dssp EEEEEECCTTCBHHHHHH--HCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTT--CCEEE
T ss_pred EEEEEecCCCCCHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCC--CeEEE
Confidence 489999999999998854 34466666655555544 7788988 99999999999999865 89999
Q ss_pred EecccccccCh
Q 002927 197 LDFGLTKKLSS 207 (864)
Q Consensus 197 iDFG~~~~l~~ 207 (864)
+|||++..+..
T Consensus 173 ~DFg~a~~~~~ 183 (322)
T 3soc_A 173 ADFGLALKFEA 183 (322)
T ss_dssp CCCTTCEEECT
T ss_pred ccCCccccccc
Confidence 99999977654
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.41 E-value=1.8e-13 Score=149.07 Aligned_cols=139 Identities=17% Similarity=0.203 Sum_probs=97.2
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||+|++|.||+|+.+ +++.||||+.+....... +..
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~ 74 (322)
T 1p4o_A 31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE------------------------------------RIE 74 (322)
T ss_dssp EEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHH------------------------------------HHH
T ss_pred eEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHH------------------------------------HHH
Confidence 67999999999999864 378999998764322110 112
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh---------cC
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA---------FG 151 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~---------~~ 151 (864)
+.+|++.+.++.+ + .|.+++. ....+|||||++|.+|.++..... ..
T Consensus 75 ~~~E~~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 134 (322)
T 1p4o_A 75 FLNEASVMKEFNC------------------H--HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 134 (322)
T ss_dssp HHHHHHHGGGCCC------------------T--TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCC
T ss_pred HHHHHHHHHhcCC------------------C--CEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCC
Confidence 4445555444321 1 2333332 456789999999999998864322 22
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 152 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 152 ~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.....+...+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 135 ~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~--~~~kl~Dfg~~~~~~~ 190 (322)
T 1p4o_A 135 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED--FTVKIGDFGMTRDIYE 190 (322)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTT--CCEEECCTTCCCGGGG
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCC--CeEEECcCcccccccc
Confidence 35555555555544 888999999999999999999865 8999999999876543
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=99.41 E-value=2.4e-13 Score=144.50 Aligned_cols=137 Identities=17% Similarity=0.183 Sum_probs=96.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+........ + .+.+|+
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------~------~~~~e~ 56 (276)
T 2yex_A 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP------------------------------E------NIKKEI 56 (276)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHH------------------------------H------HHHHHH
T ss_pred EEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhh------------------------------H------HHHHHH
Confidence 68999999999999986 7999999997643211000 0 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++.+ + .|++++ . ....++||||++|.+|.+.... ...++...+...+.+++
T Consensus 57 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~ 115 (276)
T 2yex_A 57 CINKMLNH------------------E--NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLM 115 (276)
T ss_dssp HHHHTCCC------------------T--TBCCEEEEEEETTEEEEEEECCTTEEGGGGSBT-TTBCCHHHHHHHHHHHH
T ss_pred HHHHhcCC------------------C--CceeeeeEEEcCCEEEEEEEecCCCcHHHHHhh-ccCCCHHHHHHHHHHHH
Confidence 44433321 1 133333 2 4556899999999999887532 23456666555555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||.||+++.+ ++++|+|||++..+.
T Consensus 116 ~~l~~lH~~~i~H~dl~p~Nil~~~~--~~~kl~dfg~~~~~~ 156 (276)
T 2yex_A 116 AGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFR 156 (276)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCCTTCEECE
T ss_pred HHHHHHHhCCeeccCCChHHEEEccC--CCEEEeeCCCccccC
Confidence 888999999999999999999865 899999999987654
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=3.8e-13 Score=153.32 Aligned_cols=143 Identities=13% Similarity=0.116 Sum_probs=95.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+..-... + .+..|.
T Consensus 103 ~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~--------------------------------~------~~~~E~ 144 (429)
T 3kvw_A 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFH--------------------------------R------QAAEEI 144 (429)
T ss_dssp EEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHH--------------------------------H------HHHHHH
T ss_pred EEcccCccEEEEEEEECCCCcEEEEEEECCccchH--------------------------------H------HHHHHH
Confidence 67999999999999976 79999999987642210 0 122355
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~ 164 (864)
+.++.+++.-. .....|.+++. ....+|||||++| +|.++..... .+++...+...+.++
T Consensus 145 ~~l~~l~~~~~--------------~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi 209 (429)
T 3kvw_A 145 RILEHLRKQDK--------------DNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSI 209 (429)
T ss_dssp HHHHHHHTTCT--------------TSCSCBCCEEEEEEETTEEEEEECCCCC-BHHHHHHHTTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHhhccc--------------cCCcCEEEEEeecccCCeEEEEEeccCC-CHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 55555544210 11223344432 4567899999976 5655543322 235655555555444
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+ +..+|..|++|||+||.|||++.++...++|+|||++....
T Consensus 210 ~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~ 253 (429)
T 3kvw_A 210 LQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253 (429)
T ss_dssp HHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred HHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence 4 88899999999999999999997622239999999986543
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.41 E-value=2.3e-13 Score=156.42 Aligned_cols=140 Identities=18% Similarity=0.208 Sum_probs=85.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|++|.||+|+.+ +|+.||||+.......... . -.+.+|+
T Consensus 59 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~--~---------------------------------~~~~~E~ 103 (458)
T 3rp9_A 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLID--C---------------------------------KRILREI 103 (458)
T ss_dssp CC-------CEEEEEECC--CEEEEEEECSTTSSHHH--H---------------------------------HHHHHHH
T ss_pred eEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHH--H---------------------------------HHHHHHH
Confidence 67999999999999976 8999999987643321110 0 0134466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~ 163 (864)
+.+.++++.. -+.+-.++. ....+|||||++| +|.++.. ....+....+...+.+
T Consensus 104 ~~l~~l~h~n-----------------iv~l~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~-~~~~l~~~~~~~~~~q 164 (458)
T 3rp9_A 104 AILNRLNHDH-----------------VVKVLDIVIPKDVEKFDELYVVLEIADS-DFKKLFR-TPVYLTELHIKTLLYN 164 (458)
T ss_dssp HHHHHCCCTT-----------------BCCEEEECCCSCTTTCCCEEEEECCCSE-EHHHHHH-SSCCCCHHHHHHHHHH
T ss_pred HHHHhCCCCC-----------------CCceEEEEecCCcccCceEEEEEecccc-chhhhcc-cCCCCCHHHHHHHHHH
Confidence 6665553210 122222221 1356899999865 5554432 1223555555555555
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
++ +..+|..|++||||||+|||++.+ +.++|+|||+++.+.
T Consensus 165 i~~aL~~LH~~~iiHrDlKp~NILl~~~--~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 165 LLVGVKYVHSAGILHRDLKPANCLVNQD--CSVKVCDFGLARTVD 207 (458)
T ss_dssp HHHHHHHHHHTTCBCCCCCGGGEEECTT--CCEEECCCTTCBCTT
T ss_pred HHHHHHHHHhCCcCCCCCChhhEEECCC--CCEeecccccchhcc
Confidence 44 889999999999999999999865 899999999998765
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.41 E-value=1.9e-13 Score=154.06 Aligned_cols=145 Identities=19% Similarity=0.168 Sum_probs=97.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+...... . .-.+.+|+
T Consensus 15 ~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----------------------~--------------~~~~~~E~ 58 (396)
T 4eut_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR----------------------P--------------VDVQMREF 58 (396)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS----------------------C--------------HHHHHHHH
T ss_pred EEEEcCCCeEEEEEEECCCCcEEEEEEeccccccc----------------------h--------------HHHHHHHH
Confidence 67999999999999986 69999999976321100 0 00123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-c--CCceEEEeecCCcCCCChHHHhhc--CCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAF--GVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLvmE~i~G~~L~~~~~~~~~--~~~~~~l~~~~~~~ 164 (864)
+.+.++++. .-+.+-.++. . ...+|||||++|.+|.++...... +++...+...+.++
T Consensus 59 ~~l~~l~hp-----------------nIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi 121 (396)
T 4eut_A 59 EVLKKLNHK-----------------NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV 121 (396)
T ss_dssp HHHHHCCCT-----------------TBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHH
T ss_pred HHHHhcCCC-----------------CCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHH
Confidence 555554321 0111222222 2 245899999999999887543222 26666666665555
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEcc--CCCCceEEEecccccccChH
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSK--DPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~--~~~g~i~LiDFG~~~~l~~~ 208 (864)
+ +..+|..|++|||+||+|||+.. ++++.++|+|||++..+...
T Consensus 122 ~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~ 169 (396)
T 4eut_A 122 VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (396)
T ss_dssp HHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG
T ss_pred HHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC
Confidence 4 88999999999999999999832 12367999999999877643
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=2.7e-13 Score=149.10 Aligned_cols=140 Identities=12% Similarity=0.115 Sum_probs=98.1
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+.||+|++|.||+|+.. +|+.||+|+......... +..+ .+.+|
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~----------------------------~~~~------~~~~E 91 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP----------------------------HQRE------KMSME 91 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSH----------------------------HHHH------HHHHH
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCH----------------------------HHHH------HHHHH
Confidence 367999999999999986 689999998764321000 0000 13345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
+..+.++.+ + .|.+++ . ....++||||++|.+|.++... ...++...+...+.++
T Consensus 92 ~~~l~~l~h------------------~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~l~~~~~~~i~~qi 150 (335)
T 2owb_A 92 ISIHRSLAH------------------Q--HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR-RKALTEPEARYYLRQI 150 (335)
T ss_dssp HHHHHTCCC------------------T--TBCCEEEEEECSSEEEEEECCCTTCBHHHHHHH-HCSCCHHHHHHHHHHH
T ss_pred HHHHHhCCC------------------C--CCCeEEEEEecCCeEEEEEecCCCCCHHHHHhc-cCCCCHHHHHHHHHHH
Confidence 554444321 1 123333 2 4557899999999999887542 3456666666665555
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+.
T Consensus 151 ~~aL~~LH~~~ivH~dlkp~NIl~~~~--~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 151 VLGCQYLHRNRVIHRDLKLGNLFLNED--LEVKIGDFGLATKVE 192 (335)
T ss_dssp HHHHHHHHHTTEECSCCCGGGEEECTT--CCEEECCCTTCEECC
T ss_pred HHHHHHHHHCCCEecCCCchhEEEcCC--CCEEEeeccCceecc
Confidence 4 888999999999999999999865 899999999988764
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.41 E-value=2.4e-13 Score=144.93 Aligned_cols=137 Identities=18% Similarity=0.191 Sum_probs=96.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.. +|+.||||+.+.... .+.+|+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----------------------------------------~~~~e~ 55 (284)
T 2a19_B 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE-----------------------------------------KAEREV 55 (284)
T ss_dssp EEEECSSSCCEEEEEETTTCCEEEEEEEECCSG-----------------------------------------GGHHHH
T ss_pred eeeccCCceEEEEEEEcCCCeEEEEEEeccccH-----------------------------------------HHHHHH
Confidence 67999999999999986 899999998765421 123345
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-----------------cCCceEEEeecCCcCCCChHHHhh-cC
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----------------SSETVLILEFMDGIRLNDCESLEA-FG 151 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----------------~~~~vLvmE~i~G~~L~~~~~~~~-~~ 151 (864)
+.+.++++.. -+.+..++. ....++||||++|.+|.++..... ..
T Consensus 56 ~~l~~l~h~~-----------------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~ 118 (284)
T 2a19_B 56 KALAKLDHVN-----------------IVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 118 (284)
T ss_dssp HHHHHCCCTT-----------------BCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSC
T ss_pred HHHHhCCCCC-----------------EEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCC
Confidence 4444442210 111111110 123589999999999998865332 34
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 152 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 152 ~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++...+...+.+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++..+..
T Consensus 119 ~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 174 (284)
T 2a19_B 119 LDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDT--KQVKIGDFGLVTSLKN 174 (284)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET--TEEEECCCTTCEESSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCC--CCEEECcchhheeccc
Confidence 56655555555544 888999999999999999999965 8999999999887654
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=8.6e-13 Score=144.23 Aligned_cols=143 Identities=14% Similarity=0.198 Sum_probs=97.6
Q ss_pred cccccccceeeEEEEe-c-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATL-V-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l-~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+.||+|++|.||+|+. + +|+.||||+.+..-.. .+ .+.+|
T Consensus 20 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~--------------------------------~~------~~~~e 61 (339)
T 1z57_A 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRY--------------------------------CE------AARSE 61 (339)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHH--------------------------------HH------HHHHH
T ss_pred EEEecCCCeEEEEEEecCCCCcEEEEEEEecCCch--------------------------------hH------HHHHH
Confidence 6799999999999997 3 7899999998753210 00 13345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITR 163 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~ 163 (864)
.+.+.++.+.-. .....+++++ . ....+|||||+ |.+|.++..... ..++...+...+.+
T Consensus 62 ~~~l~~l~~~~~--------------~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~q 126 (339)
T 1z57_A 62 IQVLEHLNTTDP--------------NSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQ 126 (339)
T ss_dssp HHHHHHHHHHCT--------------TCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHH
T ss_pred HHHHHHhhhcCC--------------CCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHH
Confidence 566666655311 1112233333 2 45678999999 777777654322 13556655555555
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCC-----------------CCceEEEecccccccC
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDP-----------------PHRPILLDFGLTKKLS 206 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~-----------------~g~i~LiDFG~~~~l~ 206 (864)
++ +..+|..|++|+|+||+|||++.+. +++++|+|||++....
T Consensus 127 i~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~ 188 (339)
T 1z57_A 127 ICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD 188 (339)
T ss_dssp HHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETT
T ss_pred HHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCc
Confidence 44 8889999999999999999998632 4679999999987644
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=99.41 E-value=2.2e-13 Score=148.06 Aligned_cols=140 Identities=17% Similarity=0.149 Sum_probs=94.2
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
++.||+|++|.||+|+.. +|+.||||+.+...... .-.+.+|
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-------------------------------------~~~~~~E 60 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHI-------------------------------------RSRVFRE 60 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCC-------------------------------------HHHHHHH
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchh-------------------------------------HHHHHHH
Confidence 467999999999999965 89999999975432100 0012334
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
++.+.++. .++. |.+++ . ....+|||||++|.+|.++... ...++...+...+.++
T Consensus 61 ~~~l~~~~-----------------~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi 120 (316)
T 2ac3_A 61 VEMLYQCQ-----------------GHRN--VLELIEFFEEEDRFYLVFEKMRGGSILSHIHK-RRHFNELEASVVVQDV 120 (316)
T ss_dssp HHHHHHTC-----------------CCTT--BCCEEEEEEETTEEEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHH
T ss_pred HHHHHHhc-----------------CCCC--eeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhc-cCCCCHHHHHHHHHHH
Confidence 44444321 1111 23333 2 5667899999999999887643 2345665555555544
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCC-CceEEEecccccccC
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPP-HRPILLDFGLTKKLS 206 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~-g~i~LiDFG~~~~l~ 206 (864)
+ +..+|..|++|+|+||.||+++.++. +.++|+|||++..+.
T Consensus 121 ~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 165 (316)
T 2ac3_A 121 ASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165 (316)
T ss_dssp HHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred HHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence 4 88899999999999999999986521 249999999987664
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.41 E-value=2.6e-13 Score=149.77 Aligned_cols=140 Identities=15% Similarity=0.199 Sum_probs=96.3
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|+..+|+.||||+.+....... .. -.+.+|++
T Consensus 15 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~--~~---------------------------------~~~~~E~~ 59 (343)
T 3dbq_A 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQ--TL---------------------------------DSYRNEIA 59 (343)
T ss_dssp EEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHH--HH---------------------------------HHHHHHHH
T ss_pred EEEecCCCeEEEEEEeCCCCEEEEEEeeccccchH--HH---------------------------------HHHHHHHH
Confidence 67999999999999988899999998764321110 00 01455676
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.+.++.+. . ..|++++. ....+||||+ .|.+|.++... ...++...+...+.+++
T Consensus 60 ~l~~l~~~----------------~--~~iv~~~~~~~~~~~~~lv~e~-~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~ 119 (343)
T 3dbq_A 60 YLNKLQQH----------------S--DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKK-KKSIDPWERKSYWKNMLE 119 (343)
T ss_dssp HHHHHTTT----------------C--TTBCCEEEEEECSSEEEEEECC-CSEEHHHHHHH-SCCCCHHHHHHHHHHHHH
T ss_pred HHHhhhhc----------------C--CceEEEeeeEeeCCEEEEEEeC-CCCCHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 76666431 0 12333332 4557899995 56788777542 33456655555555444
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|||+||.|||++. +.++|+|||++..+...
T Consensus 120 al~~lH~~~iiHrDikp~NIll~~---~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 120 AVHTIHQHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPD 160 (343)
T ss_dssp HHHHHHHTTCCCCCCCGGGEEEET---TEEEECCCSSSCCC---
T ss_pred HHHHHHhCCeecCCCCcceEEEEC---CcEEEeecccccccCcc
Confidence 88899999999999999999962 78999999999887654
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=99.41 E-value=1.9e-13 Score=146.88 Aligned_cols=137 Identities=17% Similarity=0.231 Sum_probs=89.9
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|+.. ..||||+.+....... +. -.|.+|++
T Consensus 30 ~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~--~~---------------------------------~~~~~E~~ 72 (289)
T 3og7_A 30 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQ--QL---------------------------------QAFKNEVG 72 (289)
T ss_dssp EEEEECSSEEEEEEESS--SEEEEEEESCSSCCHH--HH---------------------------------HHHHHHHH
T ss_pred eEecCCCCeEEEEEEEc--CceEEEEEeccCCCHH--HH---------------------------------HHHHHHHH
Confidence 67999999999999863 4699999865432110 00 01334555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
.+.++++ +. |.+++. ....++||||++|.+|.+.........+...+...+.+++
T Consensus 73 ~l~~l~h------------------~~--iv~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~ 132 (289)
T 3og7_A 73 VLRKTRH------------------VN--ILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARG 132 (289)
T ss_dssp HHTTCCC------------------TT--BCCEEEEECSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHH
T ss_pred HHHhCCC------------------Cc--EEEEEeeccCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHH
Confidence 4444321 12 223332 5667999999999999877543344466666655555544
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||.||+++.+ ++++|+|||++....
T Consensus 133 L~~lH~~~i~H~Dlkp~Nil~~~~--~~~kl~Dfg~~~~~~ 171 (289)
T 3og7_A 133 MDYLHAKSIIHRDLKSNNIFLHED--NTVKIGDFGLATEKS 171 (289)
T ss_dssp HHHHHHTTCCCSCCCGGGEEEETT--TEEEECCCC------
T ss_pred HHHHHhCCcccccCccceEEECCC--CCEEEccceeccccc
Confidence 888999999999999999999865 899999999987654
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=4.1e-13 Score=143.40 Aligned_cols=141 Identities=18% Similarity=0.200 Sum_probs=97.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+...... .+. -.+.+|+
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~---------------------------------~~~~~e~ 56 (284)
T 3kk8_A 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA--RDF---------------------------------QKLEREA 56 (284)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCH--HHH---------------------------------HHHHHHH
T ss_pred hhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCH--HHH---------------------------------HHHHHHH
Confidence 67999999999999976 79999999976432110 000 0134466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ + .|++++ . ....+++|||++|.+|.+... .....+...+...+.+++
T Consensus 57 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~ 115 (284)
T 3kk8_A 57 RICRKLQH------------------P--NIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQIL 115 (284)
T ss_dssp HHHHHCCC------------------T--TBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HHSSCCHHHHHHHHHHHH
T ss_pred HHHHHcCC------------------C--CcCeEEEEEEcCCEEEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 66555432 1 123333 2 455689999999999876643 233456666655555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCC-CCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.||+++.++ ++.++|+|||++.....
T Consensus 116 ~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 116 ESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp HHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred HHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 8889999999999999999998542 24599999999876654
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=3.5e-13 Score=144.93 Aligned_cols=140 Identities=12% Similarity=0.115 Sum_probs=97.7
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+.||+|++|+||+|+.+ +|+.||+|+......... +..+ .+.+|
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~----------------------------~~~~------~~~~e 65 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP----------------------------HQRE------KMSME 65 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSH----------------------------HHHH------HHHHH
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCH----------------------------HHHH------HHHHH
Confidence 367999999999999986 689999998754321000 0000 13345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
+..+.++.+ + .|++++ . ....++||||++|.+|.++... ...++...+...+.++
T Consensus 66 ~~~l~~l~h------------------~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~i~~qi 124 (294)
T 2rku_A 66 ISIHRSLAH------------------Q--HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR-RKALTEPEARYYLRQI 124 (294)
T ss_dssp HHHHHTCCC------------------T--TBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HCSCCHHHHHHHHHHH
T ss_pred HHHHHhCCC------------------C--CEeeeeeeeccCCEEEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHH
Confidence 554444321 1 123333 2 4457899999999999887542 3346666666655555
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+.
T Consensus 125 ~~~l~~lH~~~i~H~dl~p~Nil~~~~--~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 125 VLGCQYLHRNRVIHRDLKLGNLFLNED--LEVKIGDFGLATKVE 166 (294)
T ss_dssp HHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEECC
T ss_pred HHHHHHHHHCCccccCCChHhEEEcCC--CCEEEEeccCceecc
Confidence 4 888999999999999999999865 899999999988764
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.41 E-value=1e-12 Score=142.40 Aligned_cols=146 Identities=18% Similarity=0.181 Sum_probs=93.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+....... .. . .+.++.+|.
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~------------------~~-~-------------~~~~~~~e~ 62 (308)
T 3g33_A 15 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGG------------------GG-G-------------LPISTVREV 62 (308)
T ss_dssp EEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTT------------------SS-C-------------CCHHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEeccccccc------------------cc-c-------------cchhHHHHH
Confidence 67999999999999975 899999998752110000 00 0 001123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEecC------CceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQSS------ETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEI 161 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~~~------~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~ 161 (864)
+.++++... . ++. +.+-.++... ..++||||++| +|.++..... ..++...+...+
T Consensus 63 ~~l~~l~~~-~--------------h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~ 126 (308)
T 3g33_A 63 ALLRRLEAF-E--------------HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLM 126 (308)
T ss_dssp HHHHHHHHH-C--------------CTTBCCEEEEEEECCSSSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHH
T ss_pred HHHHHHhhc-C--------------CCCeEEeeeeeeccCCCCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHH
Confidence 444444431 1 111 2222222221 25899999986 6666543221 125666665555
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++..++
T Consensus 127 ~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~--~~~kl~Dfg~a~~~~ 171 (308)
T 3g33_A 127 RQFLRGLDFLHANCIVHRDLKPENILVTSG--GTVKLADFGLARIYS 171 (308)
T ss_dssp HHHHHHHHHHHHTTCCCSCCCTTTEEECTT--SCEEECSCSCTTTST
T ss_pred HHHHHHHHHHHHCCcccCCCCHHHEEEcCC--CCEEEeeCccccccC
Confidence 5554 889999999999999999999865 899999999987654
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=99.40 E-value=3.5e-13 Score=147.16 Aligned_cols=145 Identities=18% Similarity=0.233 Sum_probs=98.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+........ ..... -.+.+|+
T Consensus 18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------~~~~~--------------~~~~~E~ 66 (321)
T 2a2a_A 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR-----------------RGVSR--------------EEIEREV 66 (321)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCS-----------------SSBCH--------------HHHHHHH
T ss_pred eEeeecCCEEEEEEEECCCCeEEEEEEEecccccccc-----------------cchhH--------------HHHHHHH
Confidence 68999999999999986 7999999987654321000 00000 0134566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.+ +. +.+-.++. ....++||||++|.+|.++... ...++...+...+.+++
T Consensus 67 ~~l~~l~h------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~a 127 (321)
T 2a2a_A 67 SILRQVLH------------------HNVITLHDVYENRTDVVLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDG 127 (321)
T ss_dssp HHHHHCCC------------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHT-CSCEEHHHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------CCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHH
Confidence 55555422 11 11222222 4567899999999999887542 23345555555555544
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCC----ceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPH----RPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g----~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||+||+++.+ + +++|+|||++..+..
T Consensus 128 L~~lH~~~ivH~dikp~NIl~~~~--~~~~~~~kl~Dfg~~~~~~~ 171 (321)
T 2a2a_A 128 VNYLHTKKIAHFDLKPENIMLLDK--NIPIPHIKLIDFGLAHEIED 171 (321)
T ss_dssp HHHHHHTTEECCCCSGGGEEESCT--TSSSCCEEECCCTTCEECCT
T ss_pred HHHHHhCCeecCCCChHHEEEecC--CCCcCCEEEccCccceecCc
Confidence 888999999999999999999865 4 799999999987654
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=5.8e-13 Score=143.83 Aligned_cols=139 Identities=17% Similarity=0.119 Sum_probs=95.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+..- . +.+|.
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~----------------------------------------~~~e~ 61 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP--K----------------------------------------ARREV 61 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECSH--H----------------------------------------HHHHH
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecccH--H----------------------------------------HHHHH
Confidence 67999999999999975 89999999875421 1 11233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-----cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-----~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~ 162 (864)
..+.+... +++ +.+-.++. ....+|||||++|.+|.++..... ..++...+...+.
T Consensus 62 ~~~~~~~~-----------------h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ 124 (299)
T 3m2w_A 62 ELHWRASQ-----------------CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 124 (299)
T ss_dssp HHHHHHTT-----------------STTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHH
T ss_pred HHHHHhcc-----------------CCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHH
Confidence 33222211 111 12222221 234689999999999988765322 2356666666655
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCC-CCceEEEecccccccChH
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~~ 208 (864)
+++ +..+|..|++|+|+||.||+++.+. ++.++|+|||++..+...
T Consensus 125 qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 173 (299)
T 3m2w_A 125 SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGE 173 (299)
T ss_dssp HHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTTC
T ss_pred HHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccccc
Confidence 554 8899999999999999999998632 478999999999877653
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=3.5e-13 Score=146.10 Aligned_cols=141 Identities=18% Similarity=0.153 Sum_probs=90.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.++.-.... . ..-++.+|+
T Consensus 38 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~----~------------------------------~~~~~~~E~ 83 (310)
T 2wqm_A 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDA----K------------------------------ARADCIKEI 83 (310)
T ss_dssp EEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCH----H------------------------------HHHHHHHHH
T ss_pred EeecCCCCceEEEEEEcCCCceEEEEeeehhhccCH----H------------------------------HHHHHHHHH
Confidence 78999999999999975 899999998764211000 0 000134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHh---hcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l~~~~~ 162 (864)
+.+.++++ +. |++++ . ....++||||++|.+|.++.... ...++...+...+.
T Consensus 84 ~~l~~l~h------------------~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~ 143 (310)
T 2wqm_A 84 DLLKQLNH------------------PN--VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFV 143 (310)
T ss_dssp HHHHTCCC------------------TT--BCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHhCCC------------------CC--EeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHH
Confidence 55555422 11 23333 2 45678999999999998876431 22355666655555
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 144 qi~~~l~~LH~~~i~H~dl~p~NIl~~~~--~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 144 QLCSALEHMHSRRVMHRDIKPANVFITAT--GVVKLGDLGLGRFFSS 188 (310)
T ss_dssp HHHHHHHHHHHTTCCCCCCCGGGEEECTT--SCEEECCC--------
T ss_pred HHHHHHHHHhhCCeeCCCCcHHHEEEcCC--CCEEEEeccceeeecC
Confidence 544 788999999999999999999865 8999999999876644
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.6e-13 Score=147.46 Aligned_cols=149 Identities=17% Similarity=0.211 Sum_probs=97.1
Q ss_pred ccccc-ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhh
Q 002927 5 FMDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 82 (864)
Q Consensus 5 F~~fd-~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 82 (864)
+..|. .+.||+|++|+||+|+.. +|+.||||+.+......- +..+
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~----------------------------~~~~----- 79 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDP----------------------------VFRT----- 79 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSH----------------------------HHHH-----
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCH----------------------------HHHH-----
Confidence 34444 378999999999999976 799999999765432110 0001
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHH
Q 002927 83 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 160 (864)
Q Consensus 83 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 160 (864)
.+.+|++.+.++.+ +. +.+-.++. ....+++|||++|.+|.++... ...++...+...
T Consensus 80 -~~~~e~~~l~~l~h------------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i 139 (309)
T 2h34_A 80 -RMQREARTAGRLQE------------------PHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRR-QGPLAPPRAVAI 139 (309)
T ss_dssp -HHHHHHHHHTTCCC------------------TTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHH-HCSCCHHHHHHH
T ss_pred -HHHHHHHHHhhcCC------------------CCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHh-cCCCCHHHHHHH
Confidence 13345544444321 11 11222222 5667899999999999987643 234666666665
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++......
T Consensus 140 ~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~--~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 140 VRQIGSALDAAHAAGATHRDVKPENILVSAD--DFAYLVDFGIASATTDE 187 (309)
T ss_dssp HHHHHHHHHHHHHTTCCCSCCCGGGEEECTT--SCEEECSCCC-------
T ss_pred HHHHHHHHHHHHHCcCCcCCCChHHEEEcCC--CCEEEecCccCcccccc
Confidence 55554 888999999999999999999865 89999999998776543
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=5.1e-13 Score=153.82 Aligned_cols=138 Identities=18% Similarity=0.256 Sum_probs=88.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.+........ .+ .+.+|.
T Consensus 68 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~-----------------------------~~------~~~~E~ 112 (464)
T 3ttj_A 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH-----------------------------AK------RAYREL 112 (464)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHH-----------------------------HH------HHHHHH
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEECccccChHH-----------------------------HH------HHHHHH
Confidence 78999999999999976 7999999997653221100 00 123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEec-------CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-------SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-------~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
+.+.++.+.. -+.+-.++.. ...+|||||++|..+. .-...++...+...+.
T Consensus 113 ~~l~~l~hpn-----------------Iv~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~~----~~~~~l~~~~~~~~~~ 171 (464)
T 3ttj_A 113 VLMKCVNHKN-----------------IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ----VIQMELDHERMSYLLY 171 (464)
T ss_dssp HHHHHCCCTT-----------------BCCCSEEECSCCSTTTCCEEEEEEECCSEEHHH----HHTSCCCHHHHHHHHH
T ss_pred HHHHhCCCCC-----------------CCcEEEEEccCCccccCCeEEEEEeCCCCCHHH----HHhhcCCHHHHHHHHH
Confidence 5554442210 1122222221 2348999999975222 2223456555555554
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+++ +..+|..|++|||+||+|||++.+ +.++|+|||+++...
T Consensus 172 qil~aL~~lH~~~iiHrDlkp~NIll~~~--~~~kl~DFG~a~~~~ 215 (464)
T 3ttj_A 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTAG 215 (464)
T ss_dssp HHHHHHHHHHHTTCCCCCCCGGGEEECTT--SCEEECCCCCC----
T ss_pred HHHHHHHHHHHCCcccCCCChHhEEEeCC--CCEEEEEEEeeeecC
Confidence 444 889999999999999999999865 899999999987543
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.6e-13 Score=164.14 Aligned_cols=144 Identities=17% Similarity=0.230 Sum_probs=100.7
Q ss_pred ccccccccceeeEEEEec---CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 10 ETPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
.+.||+|++|.||+|.+. +++.||||+.+....... ..-++.
T Consensus 374 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~-----------------------------------~~~~~~ 418 (635)
T 4fl3_A 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPA-----------------------------------LKDELL 418 (635)
T ss_dssp EEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGG-----------------------------------GHHHHH
T ss_pred CCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHH-----------------------------------HHHHHH
Confidence 347999999999999653 578999999875432110 001245
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
+|++.+.++++.. -+.+-.++.....+|||||++|.+|.++.. ....+....+...+.+++
T Consensus 419 ~E~~il~~l~hpn-----------------Iv~l~~~~~~~~~~lv~E~~~~g~L~~~l~-~~~~l~~~~~~~i~~qi~~ 480 (635)
T 4fl3_A 419 AEANVMQQLDNPY-----------------IVRMIGICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSM 480 (635)
T ss_dssp HHHHHHHHCCCTT-----------------BCCEEEEEESSSEEEEEECCTTEEHHHHHH-HCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCC-----------------EeeEEEEEecCCEEEEEEccCCCCHHHHHh-hCCCCCHHHHHHHHHHHHH
Confidence 5666666653210 122222223556789999999999988764 223456666666555554
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|+.||+|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 481 ~L~yLH~~~iiHrDLkp~NILl~~~--~~~kL~DFGla~~~~~~ 522 (635)
T 4fl3_A 481 GMKYLEESNFVHRDLAARNVLLVTQ--HYAKISDFGLSKALRAD 522 (635)
T ss_dssp HHHHHHHTTCCCSCCSGGGEEEEET--TEEEECCTTHHHHTTC-
T ss_pred HHHHHHHCCEeCCCCChHhEEEeCC--CCEEEEEcCCccccccC
Confidence 888999999999999999999976 89999999999876543
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=8.3e-13 Score=145.45 Aligned_cols=147 Identities=13% Similarity=0.050 Sum_probs=95.7
Q ss_pred cccccccceeeEEEEec-CC-CEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATLV-DG-RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G-~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+.||+|++|.||+|+.+ +| +.||||+.+..-... + .+.+|
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~--------------------------------~------~~~~E 66 (355)
T 2eu9_A 25 GNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR--------------------------------E------AARLE 66 (355)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHH--------------------------------H------HHHHH
T ss_pred EEeeccCCeEEEEEEecCCCceEEEEEEEcccccch--------------------------------h------HHHHH
Confidence 67999999999999975 45 789999987542110 0 13346
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
++.+.++++.... .....+.+...+. ....+|||||++|..+..+.......++...+...+.+++
T Consensus 67 ~~~l~~l~~~~~~-----------~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~ 135 (355)
T 2eu9_A 67 INVLKKIKEKDKE-----------NKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHA 135 (355)
T ss_dssp HHHHHHHHHHCTT-----------SCSCBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCC-----------CceeEEEeeeeeeeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence 6666666653210 0000112222222 5667899999966544433222223466666666555554
Q ss_pred HHHHHhcCeeccCCCCCCeEEccC-----------------CCCceEEEecccccccC
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKD-----------------PPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~-----------------~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||+|||+..+ .++.++|+|||++....
T Consensus 136 L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~ 193 (355)
T 2eu9_A 136 LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDH 193 (355)
T ss_dssp HHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETT
T ss_pred HHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccc
Confidence 889999999999999999999421 24789999999987643
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.40 E-value=8.1e-13 Score=146.50 Aligned_cols=143 Identities=16% Similarity=0.132 Sum_probs=96.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.+...... . .+..|+
T Consensus 41 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~------------------------------------~~~~e~ 82 (360)
T 3llt_A 41 RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYT--R------------------------------------SAKIEA 82 (360)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHH--H------------------------------------HHHHHH
T ss_pred EEEcccCCeEEEEEEECCCCeEEEEEEeccchhhh--h------------------------------------hhHHHH
Confidence 67999999999999975 79999999986422110 0 022344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~ 164 (864)
..++++... ...+..|.+++ . ....+|||||+ |.+|.++..... .+++...+...+.++
T Consensus 83 ~~l~~l~~~---------------~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi 146 (360)
T 3llt_A 83 DILKKIQND---------------DINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEI 146 (360)
T ss_dssp HHHHHTCCC---------------STTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHH
T ss_pred HHHHHhccc---------------CCCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence 444443210 00011233333 2 45678999999 888887754322 236666666655555
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccC-----------------------CCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKD-----------------------PPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~-----------------------~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+|+.|++|||+||+|||++.. .++.++|+|||++...+.
T Consensus 147 ~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~ 214 (360)
T 3llt_A 147 LKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD 214 (360)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS
T ss_pred HHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCC
Confidence 4 889999999999999999999741 247899999999876543
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=3.2e-13 Score=143.78 Aligned_cols=139 Identities=17% Similarity=0.171 Sum_probs=97.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +++.||||+..+...... -.+.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~-------------------------------------~~~~~E~ 57 (277)
T 3f3z_A 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDV-------------------------------------DRFKQEI 57 (277)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCH-------------------------------------HHHHHHH
T ss_pred eEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchH-------------------------------------HHHHHHH
Confidence 67999999999999976 688999998764322110 0133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ + .|++++. ....++||||++|.+|.+.... ...++...+...+.+++
T Consensus 58 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~i~~~i~ 116 (277)
T 3f3z_A 58 EIMKSLDH------------------P--NIIRLYETFEDNTDIYLVMELCTGGELFERVVH-KRVFRESDAARIMKDVL 116 (277)
T ss_dssp HHHHTCCC------------------T--TBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HCSCCHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------C--CEeeEEEEEecCCeEEEEEeccCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 55544421 1 1333332 4557899999999999876542 33456666665555554
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccC-CCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|+.|++|+|+||.||++..+ .++.++|+|||++..+..
T Consensus 117 ~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 117 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred HHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 888999999999999999999321 248899999999887653
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=3e-13 Score=145.79 Aligned_cols=137 Identities=17% Similarity=0.173 Sum_probs=96.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+........ . -++.+|+
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-----------------------~--------------~~~~~e~ 67 (302)
T 2j7t_A 25 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE-----------------------L--------------EDYIVEI 67 (302)
T ss_dssp EEEECSTTCCEEEEEETTTCCEEEEEEEC----CC-----------------------H--------------HHHHHHH
T ss_pred ceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHH-----------------------H--------------HHHHHHH
Confidence 57999999999999986 79999999876432110 0 0134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.+ +. +.+-.++. ....++||||++|.+|.++.......++...+...+.+++
T Consensus 68 ~~l~~l~h------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~ 129 (302)
T 2j7t_A 68 EILATCDH------------------PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEA 129 (302)
T ss_dssp HHHHHCCC------------------TTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHH
T ss_pred HHHhcCCC------------------CCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHH
Confidence 55554422 11 11222222 5677899999999999887654445567666666655554
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..
T Consensus 130 l~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~ 166 (302)
T 2j7t_A 130 LNFLHSKRIIHRDLKAGNVLMTLE--GDIRLADFGVSAK 166 (302)
T ss_dssp HHHHHHTTCCCCCCSGGGEEECTT--SCEEECCCHHHHH
T ss_pred HHHHhcCCcccCCCCHHHEEECCC--CCEEEEECCCCcc
Confidence 888999999999999999999865 8999999998653
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=3.7e-13 Score=151.41 Aligned_cols=140 Identities=16% Similarity=0.209 Sum_probs=95.2
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|+..+|+.||||+.+......- .. -.+.+|++
T Consensus 62 ~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~--~~---------------------------------~~~~~Ei~ 106 (390)
T 2zmd_A 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQ--TL---------------------------------DSYRNEIA 106 (390)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHH--HH---------------------------------HHHHHHHH
T ss_pred EEEccCCCeEEEEEEcCCCCEEEEEEEecccccHH--HH---------------------------------HHHHHHHH
Confidence 67999999999999988899999999764321100 00 01455666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.+.++.+. ++ .|.+++. ....+|||| +.|.+|.++... ....+...+...+.+++
T Consensus 107 ~l~~l~~~----------------~~--~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~ 166 (390)
T 2zmd_A 107 YLNKLQQH----------------SD--KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKK-KKSIDPWERKSYWKNMLE 166 (390)
T ss_dssp HHHHHTTT----------------CT--TBCCEEEEEECSSEEEEEEE-CCSEEHHHHHHH-CSSCCHHHHHHHHHHHHH
T ss_pred HHHHcccC----------------CC--eEEEEEEEEecCCEEEEEEe-cCCCCHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 66666431 11 1233332 445789999 567788777542 23455555444444443
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..||+|||+||.|||++ + +.++|+|||++..+...
T Consensus 167 aL~~lH~~~ivHrDlkp~NIll~-~--~~~kl~DFG~a~~~~~~ 207 (390)
T 2zmd_A 167 AVHTIHQHGIVHSDLKPANFLIV-D--GMLKLIDFGIANQMQPD 207 (390)
T ss_dssp HHHHHHTTTCCCCCCCGGGEEES-S--SCEEECCCSSSCCC---
T ss_pred HHHHHHHCCeeecCCCHHHEEEE-C--CeEEEEecCccccccCC
Confidence 8889999999999999999995 2 78999999999877543
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.39 E-value=7.5e-13 Score=141.29 Aligned_cols=149 Identities=17% Similarity=0.243 Sum_probs=100.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+........ .... .-.+.+|+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-----------------~~~~--------------~~~~~~E~ 59 (283)
T 3bhy_A 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSR-----------------RGVS--------------REEIEREV 59 (283)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCS-----------------SSBC--------------HHHHHHHH
T ss_pred HhhcccCceEEEEEEEcCCCCeeehHHhhhccccccc-----------------cchH--------------HHHHHHHH
Confidence 67999999999999987 7999999987643211000 0000 01144566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++++. .-+.+-.++. ....++||||++|.+|.++... ...++...+...+.+++ +
T Consensus 60 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l 121 (283)
T 3bhy_A 60 NILREIRHP-----------------NIITLHDIFENKTDVVLILELVSGGELFDFLAE-KESLTEDEATQFLKQILDGV 121 (283)
T ss_dssp HHHHHCCCT-----------------TBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCC-----------------CeeehhheecCCCeEEEEEeecCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Confidence 665554321 0111222222 4567899999999999887642 34566666666555554 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccCC--CCceEEEecccccccChH
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDP--PHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~--~g~i~LiDFG~~~~l~~~ 208 (864)
..+|..|++|+|+||.||+++.++ +++++|+|||++..+...
T Consensus 122 ~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~ 165 (283)
T 3bhy_A 122 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 165 (283)
T ss_dssp HHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC--
T ss_pred HHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCC
Confidence 889999999999999999998652 137999999999877643
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=99.39 E-value=2.5e-13 Score=145.36 Aligned_cols=139 Identities=17% Similarity=0.142 Sum_probs=97.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.++..... + ..+-.+.+|+
T Consensus 20 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---~-------------------------------~~~~~~~~e~ 65 (284)
T 2vgo_A 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK---E-------------------------------GVEHQLRREI 65 (284)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH---T-------------------------------TCHHHHHHHH
T ss_pred heecCCCCeEEEEEEEcCCCcEEEEEEEcccccch---H-------------------------------HHHHHHHHHH
Confidence 78999999999999976 78899999876321100 0 0011244455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++++ +. |++++ . ....++||||++|.+|.+.... ...++...+...+.+++
T Consensus 66 ~~l~~l~h------------------~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~ 124 (284)
T 2vgo_A 66 EIQSHLRH------------------PN--ILRMYNYFHDRKRIYLMLEFAPRGELYKELQK-HGRFDEQRSATFMEELA 124 (284)
T ss_dssp HHHHTCCC------------------TT--BCCEEEEEECSSEEEEEECCCTTEEHHHHHHH-HSSCCHHHHHHHHHHHH
T ss_pred HHHhcCCC------------------CC--EeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHh-cCCCCHHHHHHHHHHHH
Confidence 55554422 11 23333 2 4567899999999999877542 23456666555555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 125 ~~l~~lH~~~i~H~dl~p~Nil~~~~--~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 125 DALHYCHERKVIHRDIKPENLLMGYK--GELKIADFGWSVHAP 165 (284)
T ss_dssp HHHHHHHTTTEECCCCSGGGEEECTT--CCEEECCCTTCEECS
T ss_pred HHHHHHHHCCceecCCCHHHEEEcCC--CCEEEecccccccCc
Confidence 788999999999999999999865 899999999886654
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.39 E-value=6.2e-13 Score=145.13 Aligned_cols=140 Identities=15% Similarity=0.170 Sum_probs=94.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.+..... +-++.+|.
T Consensus 30 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--------------------------------------~~~~~~e~ 71 (326)
T 2x7f_A 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE--------------------------------------EEEIKQEI 71 (326)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSST--------------------------------------THHHHHHH
T ss_pred EEeccCCCEEEEEEEECCCCCeEEEEEEecCccc--------------------------------------HHHHHHHH
Confidence 78999999999999975 8999999997643211 00133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-------cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEE 160 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-------~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~ 160 (864)
+.+.++.+ ++. +.+-..+. ....+|||||++|.+|.++..... ..++...+...
T Consensus 72 ~~l~~l~~-----------------h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i 134 (326)
T 2x7f_A 72 NMLKKYSH-----------------HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYI 134 (326)
T ss_dssp HHHHHHCC-----------------STTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHH
T ss_pred HHHHhccC-----------------CCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHH
Confidence 55555421 111 11111211 234689999999999998865322 34566555555
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+.+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++..+..
T Consensus 135 ~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~--~~~kl~Dfg~~~~~~~ 181 (326)
T 2x7f_A 135 CREILRGLSHLHQHKVIHRDIKGQNVLLTEN--AEVKLVDFGVSAQLDR 181 (326)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCSGGGEEECTT--CCEEECCCTTTC----
T ss_pred HHHHHHHHHHHHHCCccccCCcHHHEEEcCC--CCEEEeeCcCceecCc
Confidence 54444 888999999999999999999865 8999999999887654
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.39 E-value=1.6e-13 Score=153.43 Aligned_cols=80 Identities=14% Similarity=0.211 Sum_probs=57.6
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....++||||++|.+|.++........+...+...+.+++ +..+|..|++|||+||.||+++.+ +.++|+|||+++
T Consensus 163 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~--~~~kL~DFG~a~ 240 (373)
T 3c1x_A 163 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK--FTVKVADFGLAR 240 (373)
T ss_dssp SSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT--CCEEECCC----
T ss_pred CCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCC--CCEEEeeccccc
Confidence 3467899999999999988653334455666655555544 889999999999999999999865 899999999998
Q ss_pred ccCh
Q 002927 204 KLSS 207 (864)
Q Consensus 204 ~l~~ 207 (864)
.+..
T Consensus 241 ~~~~ 244 (373)
T 3c1x_A 241 DMYD 244 (373)
T ss_dssp ----
T ss_pred cccc
Confidence 7644
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=99.39 E-value=5.8e-13 Score=148.59 Aligned_cols=139 Identities=22% Similarity=0.273 Sum_probs=82.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
++||+|++|.||+|+.. +|+.||||+.+........ .+ .+.+|+
T Consensus 35 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~-----------------------------~~------~~~~E~ 79 (367)
T 2fst_X 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-----------------------------AK------RTYREL 79 (367)
T ss_dssp EECC----CCEEEEEETTTTEEEEEEECSSTTSSHHH-----------------------------HH------HHHHHH
T ss_pred eEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHH-----------------------------HH------HHHHHH
Confidence 68999999999999965 8999999997653321100 00 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
+.+.++++.. -+.+-.++. ....+|+||++ |.+|.++.. ...++...+...+.
T Consensus 80 ~~l~~l~hpn-----------------Iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~--~~~l~~~~~~~i~~ 139 (367)
T 2fst_X 80 RLLKHMKHEN-----------------VIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVK--CQKLTDDHVQFLIY 139 (367)
T ss_dssp HHHHHCCCTT-----------------BCCCSEEECSCSSGGGCCCCEEEEECC-CEECC-------CCCCHHHHHHHHH
T ss_pred HHHHhCCCCC-----------------CCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHh--cCCCCHHHHHHHHH
Confidence 5555543210 111122221 24568999999 788888754 34466665555555
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+++ +..+|..|++|||+||+||+++.+ +.++|+|||+++...
T Consensus 140 qi~~aL~~LH~~givH~Dlkp~NIll~~~--~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 140 QILRGLKYIHSADIIHRDLKPSNLAVNED--CELKILDFGLARHTA 183 (367)
T ss_dssp HHHHHHHHHHHTTCCCCCCCGGGEEECTT--CCEEECC--------
T ss_pred HHHHHHHHHHHCCeeeCCCCHhhEEECCC--CCEEEeecccccccc
Confidence 544 888999999999999999999865 899999999987654
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.39 E-value=6.3e-13 Score=145.57 Aligned_cols=78 Identities=18% Similarity=0.249 Sum_probs=62.5
Q ss_pred CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhc--------CeeccCCCCCCeEEccCCCCceEE
Q 002927 127 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVD--------GFFNGDPHPGNFLVSKDPPHRPIL 196 (864)
Q Consensus 127 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~--------G~~H~D~hPgNIlv~~~~~g~i~L 196 (864)
...+|||||++|.+|.++.. ...++...+...+.+++ +..+|.. |++|||+||.|||++.+ +.++|
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~--~~~kl 183 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLK--STTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKN--GTCCI 183 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHH--HCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTT--SCEEE
T ss_pred CceEEEEeccCCCcHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCC--CCEEE
Confidence 45689999999999988753 44566666666665554 7888988 99999999999999865 89999
Q ss_pred EecccccccChH
Q 002927 197 LDFGLTKKLSSS 208 (864)
Q Consensus 197 iDFG~~~~l~~~ 208 (864)
+|||++..+...
T Consensus 184 ~Dfg~a~~~~~~ 195 (337)
T 3mdy_A 184 ADLGLAVKFISD 195 (337)
T ss_dssp CCCTTCEECC--
T ss_pred EeCCCceeeccc
Confidence 999999877653
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=7.5e-13 Score=145.03 Aligned_cols=139 Identities=16% Similarity=0.143 Sum_probs=98.0
Q ss_pred cccccccceeeEEEEec-CC-----CEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV-DG-----RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G-----~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||+|++|.||+|+.. +| +.||||+.+........ -.
T Consensus 52 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~ 95 (333)
T 2i1m_A 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK------------------------------------EA 95 (333)
T ss_dssp EEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHH------------------------------------HH
T ss_pred eEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHH------------------------------------HH
Confidence 67999999999999975 33 48999998764321100 01
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh-----------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA----------- 149 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~----------- 149 (864)
+.+|++.+.++.. ++ .|++++. ....+|||||++|.+|.++.....
T Consensus 96 ~~~E~~~l~~l~~-----------------h~--~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~ 156 (333)
T 2i1m_A 96 LMSELKIMSHLGQ-----------------HE--NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAI 156 (333)
T ss_dssp HHHHHHHHHHHCC-----------------CT--TBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-----
T ss_pred HHHHHHHHHhhcC-----------------CC--CeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccc
Confidence 4456666666521 11 1333332 567899999999999988765321
Q ss_pred --cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 150 --FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 150 --~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..++...+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 157 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~--~~~kl~Dfg~~~~~~ 215 (333)
T 2i1m_A 157 ANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG--HVAKIGDFGLARDIM 215 (333)
T ss_dssp --CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGG--GEEEBCCCGGGCCGG
T ss_pred cccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCC--CeEEECccccccccc
Confidence 1245555555555544 888999999999999999999865 899999999987653
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.39 E-value=5.7e-13 Score=143.21 Aligned_cols=141 Identities=11% Similarity=0.099 Sum_probs=95.8
Q ss_pred cccccccceeeEEEEec-CC---CEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV-DG---RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G---~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|++|.||+|+.. ++ ..||||+.+........ -.+.
T Consensus 27 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~------------------------------------~~~~ 70 (298)
T 3pls_A 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQV------------------------------------EAFL 70 (298)
T ss_dssp EEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHH------------------------------------HHHH
T ss_pred ceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHH------------------------------------HHHH
Confidence 67999999999999964 33 37999987643321100 0134
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe--cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 163 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~ 163 (864)
+|++.+.++.+ +. +.+-.++. ....+++|||+.|.+|.++........+...+...+.+
T Consensus 71 ~E~~~l~~l~h------------------~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~q 132 (298)
T 3pls_A 71 REGLLMRGLNH------------------PNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQ 132 (298)
T ss_dssp HHHHHHHTCCC------------------TTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHH
T ss_pred HHHHHHHhCCC------------------CCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHH
Confidence 45555554422 11 11122222 23348999999999998876543344566666555555
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 133 i~~~l~~LH~~~i~H~dikp~Nili~~~--~~~kl~Dfg~~~~~~~ 176 (298)
T 3pls_A 133 VARGMEYLAEQKFVHRDLAARNCMLDES--FTVKVADFGLARDILD 176 (298)
T ss_dssp HHHHHHHHHHTTCCCSCCSGGGEEECTT--CCEEECCTTSSCTTTT
T ss_pred HHHHHHHHHhCCcccCCCCcceEEEcCC--CcEEeCcCCCcccccC
Confidence 44 889999999999999999999865 8999999999986654
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=99.39 E-value=6.5e-13 Score=147.80 Aligned_cols=139 Identities=13% Similarity=0.114 Sum_probs=96.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.++....... -.+.+|+
T Consensus 33 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~~~E~ 76 (364)
T 3qyz_A 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC------------------------------------QRTLREI 76 (364)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHH------------------------------------HHHHHHH
T ss_pred EEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHH------------------------------------HHHHHHH
Confidence 68999999999999976 7999999998754322110 0133466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~ 163 (864)
+.+.++++.. -+.+-.++. ....++||||++| +|.++. ....++...+...+.+
T Consensus 77 ~~l~~l~h~n-----------------iv~~~~~~~~~~~~~~~~~~iv~e~~~~-~L~~~l--~~~~~~~~~~~~i~~q 136 (364)
T 3qyz_A 77 KILLRFRHEN-----------------IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL--KTQHLSNDHICYFLYQ 136 (364)
T ss_dssp HHHHHCCCTT-----------------BCCCCEEECCSSTTTCCCEEEEEECCSE-EHHHHH--HHCCCCHHHHHHHHHH
T ss_pred HHHHhcCCCC-----------------CccceeEEecCCccccceEEEEEcccCc-CHHHHH--HhCCCCHHHHHHHHHH
Confidence 6665553210 111222222 1346899999987 565553 3445666666665555
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++ +..+|..|++|+|+||+||+++.+ +.++|+|||++.....
T Consensus 137 i~~aL~~LH~~~ivH~Dikp~NIl~~~~--~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 137 ILRGLKYIHSANVLHRDLKPSNLLLNTT--CDLKICDFGLARVADP 180 (364)
T ss_dssp HHHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEECCG
T ss_pred HHHHHHHHHHCCeecCCCChHhEEECCC--CCEEEEeCcceEecCC
Confidence 54 889999999999999999999865 8999999999987654
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=3e-13 Score=144.26 Aligned_cols=137 Identities=22% Similarity=0.228 Sum_probs=90.6
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|+. +|+.||||+.+...... .+.+|++
T Consensus 27 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~---------------------------------------~~~~E~~ 66 (278)
T 1byg_A 27 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQ---------------------------------------AFLAEAS 66 (278)
T ss_dssp EEEEECSSCEEEEEEE-TTEEEEEEECCCCC--H---------------------------------------HHHHTHH
T ss_pred eEEecCCCceEEEEEE-cCCEEEEEEecchhHHH---------------------------------------HHHHHHH
Confidence 6899999999999987 58999999976542100 1333444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe--cCCceEEEeecCCcCCCChHHHhhc-CCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~~-~~~~~~l~~~~~~~~- 165 (864)
.+.++++ +. +.+-.++. ....++||||++|.+|.++...... ..+...+...+.+++
T Consensus 67 ~l~~l~h------------------~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~ 128 (278)
T 1byg_A 67 VMTQLRH------------------SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE 128 (278)
T ss_dssp HHTTCCC------------------TTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHhCCC------------------CCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHH
Confidence 4444321 11 22222222 3457899999999999887643221 145555555555444
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.||+++.+ ++++|+|||++.....
T Consensus 129 ~l~~lH~~~i~H~dlkp~Nil~~~~--~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 129 AMEYLEGNNFVHRDLAARNVLVSED--NVAKVSDFGLTKEASS 169 (278)
T ss_dssp HHHHHHHTTCCCSCCSGGGEEECTT--SCEEECCCCC------
T ss_pred HHHHHHhCCccccCCCcceEEEeCC--CcEEEeeccccccccc
Confidence 888999999999999999999865 8999999999876543
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.39 E-value=3.2e-13 Score=148.09 Aligned_cols=75 Identities=19% Similarity=0.234 Sum_probs=59.5
Q ss_pred ceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhc---------CeeccCCCCCCeEEccCCCCceEEE
Q 002927 129 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVD---------GFFNGDPHPGNFLVSKDPPHRPILL 197 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~---------G~~H~D~hPgNIlv~~~~~g~i~Li 197 (864)
.+|||||++|.+|.++.. ....+...+...+.+++ +..+|.. |++|||+||+|||++.+ ++++|+
T Consensus 87 ~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~--~~~kL~ 162 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLS--LHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKND--GTCVIS 162 (336)
T ss_dssp EEEEECCCTTCBHHHHHH--HCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTT--SCEEEC
T ss_pred EEEEEecCCCCcHHHHHh--hcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCC--CcEEEe
Confidence 479999999999988754 33445555554444443 7889988 99999999999999865 899999
Q ss_pred ecccccccCh
Q 002927 198 DFGLTKKLSS 207 (864)
Q Consensus 198 DFG~~~~l~~ 207 (864)
|||++..+..
T Consensus 163 DFG~a~~~~~ 172 (336)
T 3g2f_A 163 DFGLSMRLTG 172 (336)
T ss_dssp CCTTCEECSS
T ss_pred eccceeeccc
Confidence 9999987654
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=4.9e-13 Score=146.88 Aligned_cols=136 Identities=18% Similarity=0.205 Sum_probs=94.7
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|+. +|+.||||+.++..... +.+|++
T Consensus 48 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~----------------------------------------~~~e~~ 86 (342)
T 1b6c_B 48 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERS----------------------------------------WFREAE 86 (342)
T ss_dssp EEEEEETTEEEEEEEE-TTEEEEEEEECGGGHHH----------------------------------------HHHHHH
T ss_pred eeecCCCCcEEEEEEE-cCccEEEEEeCchhHHH----------------------------------------HHHHHH
Confidence 6899999999999997 69999999986533221 222333
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-c----CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-S----SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~----~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
.+.... + .++.+ .+-.++. . ...++||||++|.+|.++.. ........+...+.++
T Consensus 87 ~~~~~~--l--------------~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~i~~~i 148 (342)
T 1b6c_B 87 IYQTVM--L--------------RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN--RYTVTVEGMIKLALST 148 (342)
T ss_dssp HHHHSC--C--------------CCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHH--HCCBCHHHHHHHHHHH
T ss_pred HHHHhh--c--------------CCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHh--ccCccHHHHHHHHHHH
Confidence 322210 1 11221 1222222 2 25789999999999998753 4456666666665555
Q ss_pred H--HHHHH--------hcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIY--------VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~--------~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+| ..|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 149 ~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~--~~~kL~Dfg~~~~~~~ 199 (342)
T 1b6c_B 149 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN--GTCCIADLGLAVRHDS 199 (342)
T ss_dssp HHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTT--SCEEECCCTTCEEEET
T ss_pred HHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCC--CCEEEEECCCceeccc
Confidence 4 78889 8999999999999999865 8999999999876543
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.38 E-value=3.9e-13 Score=144.20 Aligned_cols=142 Identities=17% Similarity=0.232 Sum_probs=96.4
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+.||+|++|.||+|+.+ +|+.||||+....... .... .+.+|
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----------------------~~~~--------------~~~~E 70 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ----------------------VPME--------------QIEAE 70 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC----------------------SCHH--------------HHHHH
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeeccccc----------------------hhHH--------------HHHHH
Confidence 378999999999999976 7999999987543210 0000 13345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHh---hcCCCHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEI 161 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l~~~~ 161 (864)
++.+.++.+ + .|++++. ....++||||++|.+|.+..... ...++...+...+
T Consensus 71 ~~~l~~l~h------------------p--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~ 130 (285)
T 3is5_A 71 IEVLKSLDH------------------P--NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELM 130 (285)
T ss_dssp HHHHHTCCC------------------T--TBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred HHHHHhCCC------------------c--hHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHH
Confidence 555544421 1 1233332 45678999999999988765322 2345666655555
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccC-CCCceEEEecccccccCh
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~ 207 (864)
.+++ +..+|..|++|+|+||.||+++.+ .++.++|+|||++..+..
T Consensus 131 ~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~ 179 (285)
T 3is5_A 131 KQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS 179 (285)
T ss_dssp HHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC---
T ss_pred HHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCC
Confidence 5544 888999999999999999999642 247899999999987654
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=6.8e-13 Score=146.48 Aligned_cols=137 Identities=19% Similarity=0.208 Sum_probs=96.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.++....... ..+.+|+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~~~E~ 60 (353)
T 2b9h_A 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA------------------------------------LRTLREI 60 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHH------------------------------------HHHHHHH
T ss_pred eEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHH------------------------------------HHHHHHH
Confidence 78999999999999976 7999999998754322111 0133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 160 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 160 (864)
+.+.++++ ++ |.+++. ....+++|||++| +|.++. ....++...+...
T Consensus 61 ~~l~~l~h------------------~~--iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~--~~~~~~~~~~~~~ 117 (353)
T 2b9h_A 61 KILKHFKH------------------EN--IITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVI--STQMLSDDHIQYF 117 (353)
T ss_dssp HHHHHCCC------------------TT--BCCEEEECCCSCSTTCCCEEEEECCCSE-EHHHHH--HHCCCCHHHHHHH
T ss_pred HHHHhCcC------------------CC--cCCeeeeecccccCccceEEEEEeccCc-cHHHHH--hhcCCCHHHHHHH
Confidence 55555432 11 222321 1456899999986 565553 2345666666665
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+...
T Consensus 118 ~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~--~~~kl~Dfg~a~~~~~~ 165 (353)
T 2b9h_A 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINSN--CDLKVCDFGLARIIDES 165 (353)
T ss_dssp HHHHHHHHHHHHHTTEECSCCCGGGEEECTT--CCEEECCCTTCEECC--
T ss_pred HHHHHHHHHHHHHCCeecCCCCHHHeEEcCC--CcEEEEecccccccccc
Confidence 55554 888999999999999999999865 89999999999887654
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=99.38 E-value=4.7e-13 Score=143.26 Aligned_cols=140 Identities=13% Similarity=0.161 Sum_probs=84.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.+.........+ +..|.
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~------------------------------------~~~~~ 56 (290)
T 3fme_A 13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKR------------------------------------LLMDL 56 (290)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHH------------------------------------HHHHH
T ss_pred HhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHH------------------------------------HHHHH
Confidence 67999999999999975 899999999875432211100 01111
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHH---hhcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~---~~~~~~~~~l~~~~~ 162 (864)
... .... .++ .|++++ . ....+|||||++| ++.++... ....++...+...+.
T Consensus 57 ~~~---~~~~--------------~h~--~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~ 116 (290)
T 3fme_A 57 DIS---MRTV--------------DCP--FTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAV 116 (290)
T ss_dssp HHH---HTTC--------------CCT--TBCCEEEEEECSSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHH---HHhC--------------CCC--eEEEEeeeeeccCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 111 1111 112 223333 2 5667899999987 65554322 123456666555555
Q ss_pred HHH--HHHHHhc-CeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 163 RAY--AHQIYVD-GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 163 ~~~--l~~i~~~-G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+++ +..+|.. |++|+|+||.||+++.+ ++++|+|||++..+...
T Consensus 117 qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~~ 163 (290)
T 3fme_A 117 SIVKALEHLHSKLSVIHRDVKPSNVLINAL--GQVKMCDFGISGYLVDD 163 (290)
T ss_dssp HHHHHHHHHHHHSCCCCCCCSGGGCEECTT--CCEEBCCC---------
T ss_pred HHHHHHHHHhhcCCeecCCCCHHHEEECCC--CCEEEeecCCccccccc
Confidence 544 8889998 99999999999999865 89999999998776543
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=5.4e-13 Score=142.08 Aligned_cols=142 Identities=19% Similarity=0.223 Sum_probs=97.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+......- + .+ .+.+|+
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--~---------------------------~~------~~~~e~ 56 (279)
T 2w5a_A 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEA--E---------------------------KQ------MLVSEV 56 (279)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHH--H---------------------------HH------HHHHHH
T ss_pred hhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHH--H---------------------------HH------HHHHHH
Confidence 78999999999999986 799999999765421110 0 00 134466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe---cCCceEEEeecCCcCCCChHHHhhc---CCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAF---GVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~---~~~~~~l~~~~~ 162 (864)
+.+.++++ +. +.+-..+. ....++||||++|.+|.++...... .++...+...+.
T Consensus 57 ~~l~~l~h------------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~ 118 (279)
T 2w5a_A 57 NLLRELKH------------------PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118 (279)
T ss_dssp HHHHHCCC------------------TTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHhcCC------------------CCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHH
Confidence 66555432 11 11212221 3456899999999999988653221 256666666655
Q ss_pred HHH--HHHHHhcC-----eeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 163 RAY--AHQIYVDG-----FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~--l~~i~~~G-----~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+++ +..+|..| ++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 119 ~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~--~~~kl~dfg~~~~~~~ 168 (279)
T 2w5a_A 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK--QNVKLGDFGLARILNH 168 (279)
T ss_dssp HHHHHHHHHHHHC------CCCCCSGGGEEECSS--SCEEECCCCHHHHC--
T ss_pred HHHHHHHHHhcccCCCCeeEEeccchhhEEEcCC--CCEEEecCchheeecc
Confidence 554 88899999 9999999999999865 8999999999887654
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=3.2e-13 Score=149.34 Aligned_cols=141 Identities=16% Similarity=0.191 Sum_probs=92.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+........ . ....+.+|+
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--------------------~---------------~~~~~~~E~ 67 (351)
T 3mi9_A 23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE--------------------G---------------FPITALREI 67 (351)
T ss_dssp EECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS--------------------S---------------SCHHHHHHH
T ss_pred EEEecCCCcEEEEEEECCCCCEEEEEEEecccccc--------------------c---------------chHHHHHHH
Confidence 67999999999999985 89999999865432110 0 011133456
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 160 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 160 (864)
+.+.++++. .-+.+-.++. ....+|||||++| ++.+........++...+...
T Consensus 68 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i 129 (351)
T 3mi9_A 68 KILQLLKHE-----------------NVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRV 129 (351)
T ss_dssp HHHHHCCCT-----------------TBCCEEEEEEEC--------CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHH
T ss_pred HHHHhccCC-----------------CcccHhheeeccccccccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHH
Confidence 555554321 0111222221 1246899999997 333332222234566665555
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+.+++ +..+|+.|++|+|+||+|||++.+ +.++|+|||++..+.
T Consensus 130 ~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~--~~~kl~Dfg~a~~~~ 175 (351)
T 3mi9_A 130 MQMLLNGLYYIHRNKILHRDMKAANVLITRD--GVLKLADFGLARAFS 175 (351)
T ss_dssp HHHHHHHHHHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECC
T ss_pred HHHHHHHHHHHHHCCeeCCCCCHHHEEEcCC--CCEEEccchhccccc
Confidence 55544 888999999999999999999865 899999999987654
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=7.9e-13 Score=148.13 Aligned_cols=129 Identities=13% Similarity=0.087 Sum_probs=83.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.. +|+.||||+.+..-... + .+.+|+
T Consensus 43 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------------------------------~------~~~~E~ 84 (397)
T 1wak_A 43 RKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYT--------------------------------E------TALDEI 84 (397)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHH--------------------------------H------HHHHHH
T ss_pred EEeeecCCeeEEEEEecCCCeEEEEEEEecCCcch--------------------------------H------HHHHHH
Confidence 67999999999999975 79999999987542100 0 134466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 161 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~ 161 (864)
+.+.++++.... ......|.+++. ....+|||||+.|..+..+......+++...+...+
T Consensus 85 ~~l~~l~~~~~~------------~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~ 152 (397)
T 1wak_A 85 RLLKSVRNSDPN------------DPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKII 152 (397)
T ss_dssp HHHHHHHHSCTT------------CGGGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHH
T ss_pred HHHHHHhhcCCC------------CCCcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHH
Confidence 666666652110 000111222221 235789999996655544433222346666666655
Q ss_pred HHHH--HHHHHhc-CeeccCCCCCCeEEccC
Q 002927 162 TRAY--AHQIYVD-GFFNGDPHPGNFLVSKD 189 (864)
Q Consensus 162 ~~~~--l~~i~~~-G~~H~D~hPgNIlv~~~ 189 (864)
.+++ +..+|.. |++|||+||+|||++.+
T Consensus 153 ~qi~~aL~~lH~~~givHrDikp~NIll~~~ 183 (397)
T 1wak_A 153 QQVLQGLDYLHTKCRIIHTDIKPENILLSVN 183 (397)
T ss_dssp HHHHHHHHHHHHTTCEECCCCSGGGEEECCC
T ss_pred HHHHHHHHHHHHhCCEecCCCCHHHeeEecc
Confidence 5554 8889998 99999999999999854
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.37 E-value=5.4e-13 Score=144.81 Aligned_cols=134 Identities=14% Similarity=0.150 Sum_probs=91.0
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|+. .|+.||||+.+..... -.|.+|++
T Consensus 14 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~---------------------------------------~~~~~E~~ 53 (307)
T 2eva_A 14 EVVGRGAFGVVCKAKW-RAKDVAIKQIESESER---------------------------------------KAFIVELR 53 (307)
T ss_dssp EEEECCSSSEEEEEEE-TTEEEEEEECSSTTHH---------------------------------------HHHHHHHH
T ss_pred eEeecCCCceEEEEEE-CCeeEEEEEecChhHH---------------------------------------HHHHHHHH
Confidence 7899999999999997 5889999987543210 01344665
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeecCCcCCCChHHHhh--cCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~--~~~~~~~l~~~~~~~~- 165 (864)
.+.++++ + .|.+++. ....+|||||++|.+|.++..... .......+...+.++.
T Consensus 54 ~l~~l~h------------------p--~iv~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~ 113 (307)
T 2eva_A 54 QLSRVNH------------------P--NIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQ 113 (307)
T ss_dssp HHHHCCC------------------T--TBCCEEEBCTTTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHH
T ss_pred HHhcCCC------------------C--CcCeEEEEEcCCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHH
Confidence 5555422 1 2334443 456789999999999988754221 1244555555444443
Q ss_pred -HHHHHh---cCeeccCCCCCCeEEccCCCCc-eEEEecccccccC
Q 002927 166 -AHQIYV---DGFFNGDPHPGNFLVSKDPPHR-PILLDFGLTKKLS 206 (864)
Q Consensus 166 -l~~i~~---~G~~H~D~hPgNIlv~~~~~g~-i~LiDFG~~~~l~ 206 (864)
+..+|. .|++|+|+||.||+++.+ +. ++|+|||++..+.
T Consensus 114 ~l~~LH~~~~~~ivH~dlkp~NIll~~~--~~~~kl~Dfg~~~~~~ 157 (307)
T 2eva_A 114 GVAYLHSMQPKALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQ 157 (307)
T ss_dssp HHHHHHTCSSSCCCCCCCSGGGEEEETT--TTEEEECCCCC-----
T ss_pred HHHHHHhCCCCCeecCCCChhHEEEeCC--CCEEEEcccccccccc
Confidence 778888 899999999999999865 55 7999999987654
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.37 E-value=7e-13 Score=143.17 Aligned_cols=149 Identities=13% Similarity=0.132 Sum_probs=96.5
Q ss_pred ccccc-ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhh
Q 002927 5 FMDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 82 (864)
Q Consensus 5 F~~fd-~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 82 (864)
+..+. .+.||+|++|.||+|+.. +|+.||||+.+........ ..+
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~---------------------------------~~~ 50 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIP---------------------------------NGE 50 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHST---------------------------------THH
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccc---------------------------------hhH
Confidence 33444 378999999999999975 7999999987632111000 011
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHH-hhcCCCHHHHH
Q 002927 83 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESL-EAFGVNKQKVV 158 (864)
Q Consensus 83 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~-~~~~~~~~~l~ 158 (864)
-.+.+|++.+.++++. .-+.+-.++. ....+|||||++|. +.+.... ....++...+.
T Consensus 51 ~~~~~E~~~l~~l~h~-----------------~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~ 112 (305)
T 2wtk_C 51 ANVKKEIQLLRRLRHK-----------------NVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAH 112 (305)
T ss_dssp HHHHHHHHHHTTCCCT-----------------TBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHH
T ss_pred HHHHHHHHHHHhcCCC-----------------CeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHH
Confidence 1244566555544221 1122223332 34578999999987 4343322 23345666655
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+.
T Consensus 113 ~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~--~~~kl~dfg~~~~~~ 160 (305)
T 2wtk_C 113 GYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTG--GTLKISALGVAEALH 160 (305)
T ss_dssp HHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCCTTCEECC
T ss_pred HHHHHHHHHHHHHHHCCeeecCCCcccEEEcCC--CcEEeeccccccccC
Confidence 5555544 888999999999999999999865 899999999998764
|
| >2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... | Back alignment and structure |
|---|
Probab=99.37 E-value=3.1e-13 Score=145.47 Aligned_cols=138 Identities=17% Similarity=0.185 Sum_probs=91.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+......- ..-.+.+|+
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------------~~~~~~~e~ 53 (299)
T 2r3i_A 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-----------------------------------VPSTAIREI 53 (299)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEC-------------------------------------------CCHHHHHHH
T ss_pred hhhccCCCeeEEEEEEcCCCceEEEEEeecCccchh-----------------------------------hHHHHHHHH
Confidence 68999999999999986 799999998764321100 001133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~ 164 (864)
+.+.++.+ + .|++++ . ....+|||||++| +|.++..... .+.+...+...+.++
T Consensus 54 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~~~i 112 (299)
T 2r3i_A 54 SLLKELNH------------------P--NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL 112 (299)
T ss_dssp HHHTTCCC------------------T--TBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHH
T ss_pred HHHHHcCC------------------C--CeeeEEEEEecCCceEEEEEcccC-CHHHHHHhhhccCCCHHHHHHHHHHH
Confidence 54444321 1 123333 2 4567899999986 6666644322 345555555555444
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+ +..+|..|++|+|+||+||+++.+ ++++|+|||++..+.
T Consensus 113 ~~~l~~lH~~~i~H~dlkp~Nili~~~--~~~kl~dfg~~~~~~ 154 (299)
T 2r3i_A 113 LQGLAFCHSHRVLHRDLKPQNLLINTE--GAIKLADFGLARAFG 154 (299)
T ss_dssp HHHHHHHHHTTCCCCCCCGGGEEECTT--SCEEECSTTHHHHHC
T ss_pred HHHHHHHHHCCccCCCCCHHHeEEcCC--CCEEECcchhhhhcc
Confidence 4 888999999999999999999865 899999999886543
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=99.37 E-value=1e-12 Score=146.61 Aligned_cols=138 Identities=18% Similarity=0.265 Sum_probs=88.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.+........ .+ .+.+|+
T Consensus 31 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------------------~~------~~~~E~ 75 (371)
T 2xrw_A 31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH-----------------------------AK------RAYREL 75 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHH-----------------------------HH------HHHHHH
T ss_pred eeeEecCCEEEEEEEECCCCceEEEEEeccccCChHH-----------------------------HH------HHHHHH
Confidence 68999999999999976 7999999987643221100 00 123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEec-------CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-------SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-------~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
..+.++.+. .-+.+-.++.. ...+|||||++| +|.+.. ....+...+...+.
T Consensus 76 ~~l~~l~hp-----------------niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~---~~~~~~~~~~~i~~ 134 (371)
T 2xrw_A 76 VLMKCVNHK-----------------NIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVI---QMELDHERMSYLLY 134 (371)
T ss_dssp HHHHHCCCT-----------------TBCCEEEEECSCCSTTTCCEEEEEEECCSE-EHHHHH---HSCCCHHHHHHHHH
T ss_pred HHHHhcCCC-----------------CccceEEeeccccccccccceEEEEEcCCC-CHHHHH---hhccCHHHHHHHHH
Confidence 554444221 01222233321 145899999987 343332 23456666555555
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+++ +..+|..|++|||+||+||+++.+ +.++|+|||++....
T Consensus 135 qi~~al~~lH~~~ivH~Dlkp~NIl~~~~--~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTAG 178 (371)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEECTT--SCEEECCCCC-----
T ss_pred HHHHHHHHHHHCCeecccCCHHHEEEcCC--CCEEEEEeecccccc
Confidence 544 888999999999999999999865 899999999987654
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=99.37 E-value=1.1e-12 Score=146.56 Aligned_cols=138 Identities=21% Similarity=0.295 Sum_probs=90.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+........ .+ .+.+|+
T Consensus 48 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~-----------------------------~~------~~~~E~ 92 (371)
T 4exu_A 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIF-----------------------------AK------RAYREL 92 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHH-----------------------------HH------HHHHHH
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEecccccchhH-----------------------------HH------HHHHHH
Confidence 67999999999999976 7999999998654321100 00 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cC------CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SS------ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~------~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
+.+.++++. .-+.+-.++. .. ..+|||||++| +|.+. ....++...+...+.
T Consensus 93 ~~l~~l~h~-----------------niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~---~~~~~~~~~~~~i~~ 151 (371)
T 4exu_A 93 LLLKHMQHE-----------------NVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKI---MGMEFSEEKIQYLVY 151 (371)
T ss_dssp HHHHHCCCT-----------------TBCCCSEEECSCSSSTTCCCCEEEEECCCE-EHHHH---TTSCCCHHHHHHHHH
T ss_pred HHHHhcCCC-----------------CchhhhhheeccCCcccceeEEEEEccccc-cHHHH---hhcCCCHHHHHHHHH
Confidence 555554321 0112222332 12 23899999985 33332 233466666666555
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++....
T Consensus 152 qi~~aL~~LH~~~ivH~Dikp~NIll~~~--~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 152 QMLKGLKYIHSAGVVHRDLKPGNLAVNED--CELKILDFGLARHAD 195 (371)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEECTT--CCEEECSTTCC----
T ss_pred HHHHHHHHHHHCCCcCCCcCHHHeEECCC--CCEEEEecCcccccc
Confidence 554 888999999999999999999865 899999999987654
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=2.8e-13 Score=148.54 Aligned_cols=143 Identities=16% Similarity=0.124 Sum_probs=93.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.+......- .. -.+.+|+
T Consensus 40 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------~~------~~~~~E~ 84 (329)
T 3gbz_A 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEG-----------------------------VP------GTAIREV 84 (329)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEECCCCC-------------------------------------------CHHHH
T ss_pred EEEEecCCeEEEEEEECCCCceEEEEEEcccccccc-----------------------------cc------hhHHHHH
Confidence 68999999999999975 899999999865432110 00 0123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++++. .-+.+-.++. ....+|||||++| +|.++.. ....++...+...+.+++ +
T Consensus 85 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~~~-~~~~~~~~~~~~i~~ql~~~l 145 (329)
T 3gbz_A 85 SLLKELQHR-----------------NIIELKSVIHHNHRLHLIFEYAEN-DLKKYMD-KNPDVSMRVIKSFLYQLINGV 145 (329)
T ss_dssp HHGGGCCCT-----------------TBCCEEEEEEETTEEEEEEECCSE-EHHHHHH-HCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCC-----------------CcceEEEEEecCCEEEEEEecCCC-CHHHHHh-hcCCCCHHHHHHHHHHHHHHH
Confidence 544443221 0122222333 5667899999997 6666543 223456665555555544 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccC---CCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKD---PPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~---~~g~i~LiDFG~~~~l~~ 207 (864)
..+|+.|++|+|+||+|||++.+ .++.++|+|||++..+..
T Consensus 146 ~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~ 189 (329)
T 3gbz_A 146 NFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI 189 (329)
T ss_dssp HHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-
T ss_pred HHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCC
Confidence 88999999999999999999632 125699999999876643
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.4e-13 Score=149.61 Aligned_cols=145 Identities=19% Similarity=0.229 Sum_probs=93.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+.........+ ..-.+.+|+
T Consensus 32 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~--------------------------------~~~~~~~E~ 79 (345)
T 3hko_A 32 GAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPK--------------------------------DVERIKTEV 79 (345)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---C--------------------------------HHHHHHHHH
T ss_pred ceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHH--------------------------------HHHHHHHHH
Confidence 68999999999999976 799999998764211100000 001245566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh----------------
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA---------------- 149 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~---------------- 149 (864)
+.+.++++ + .|++++ . ....+|||||++|.+|.++.....
T Consensus 80 ~~l~~l~h------------------p--niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~ 139 (345)
T 3hko_A 80 RLMKKLHH------------------P--NIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQI 139 (345)
T ss_dssp HHHHHCCC------------------T--TBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCC
T ss_pred HHHHhCCC------------------C--CcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccc
Confidence 66666532 1 123333 2 455789999999999877642000
Q ss_pred -----------------------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 150 -----------------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 150 -----------------------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
...+...+...+.+++ +..+|..|++|+|+||.||+++.++.++++|+|||++..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~ 219 (345)
T 3hko_A 140 CPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKE 219 (345)
T ss_dssp CCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEE
T ss_pred cccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeecccccc
Confidence 0001222222333332 788899999999999999999865334899999999986
Q ss_pred cCh
Q 002927 205 LSS 207 (864)
Q Consensus 205 l~~ 207 (864)
+..
T Consensus 220 ~~~ 222 (345)
T 3hko_A 220 FYK 222 (345)
T ss_dssp GGG
T ss_pred ccc
Confidence 643
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.1e-12 Score=145.03 Aligned_cols=140 Identities=20% Similarity=0.285 Sum_probs=92.7
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+.||+|++|.||+|+.+ +|+.||||+.+....... ..+ .+.+|
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------~~~------~~~~E 73 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-----------------------------FAK------RAYRE 73 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHH-----------------------------HHH------HHHHH
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchH-----------------------------HHH------HHHHH
Confidence 378999999999999976 799999999765332110 000 13345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEec-------CCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-------SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 161 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-------~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~ 161 (864)
+..+.++++. .-+.+-.++.. ...++||||++| +|.+.. ...++...+...+
T Consensus 74 ~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~---~~~~~~~~~~~i~ 132 (353)
T 3coi_A 74 LLLLKHMQHE-----------------NVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIM---GLKFSEEKIQYLV 132 (353)
T ss_dssp HHHHHHCCCT-----------------TBCCCSEEECSCSSGGGCCCCEEEEECCSE-EGGGTT---TSCCCHHHHHHHH
T ss_pred HHHHHhcCCC-----------------CcccHhheEecccccccceeEEEEeccccC-CHHHHh---cCCCCHHHHHHHH
Confidence 5555554321 01112222221 234899999986 665543 2345666666555
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++.....
T Consensus 133 ~qi~~al~~LH~~~ivH~dlkp~NIl~~~~--~~~kl~Dfg~~~~~~~ 178 (353)
T 3coi_A 133 YQMLKGLKYIHSAGVVHRDLKPGNLAVNED--CELKILDFGLARHADA 178 (353)
T ss_dssp HHHHHHHHHHHHTTCCCSSCCGGGEEECTT--CCEEECSTTCTTC---
T ss_pred HHHHHHHHHHHHCCcccCCCCHHHEeECCC--CcEEEeecccccCCCC
Confidence 5554 888999999999999999999865 8999999999886543
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.36 E-value=9.1e-13 Score=142.47 Aligned_cols=141 Identities=16% Similarity=0.237 Sum_probs=97.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+...... +-.+.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-------------------------------------~~~~~~e~ 57 (304)
T 2jam_A 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR-------------------------------------DSSLENEI 57 (304)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEECC-------------------------------------------HHHHHH
T ss_pred eeccCCCCceEEEEEECCCCCEEEEEEEecccccc-------------------------------------hHHHHHHH
Confidence 68999999999999976 89999999987542210 00133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+.++.+ +. +.+-.++. ....++||||++|.+|.+... ....++...+...+.+++
T Consensus 58 ~~l~~l~h------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~ 118 (304)
T 2jam_A 58 AVLKKIKH------------------ENIVTLEDIYESTTHYYLVMQLVSGGELFDRIL-ERGVYTEKDASLVIQQVLSA 118 (304)
T ss_dssp HHHHHCCC------------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HHSCCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------CCeeehhhhcccCCEEEEEEEcCCCccHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 55555422 11 12222233 456789999999999987753 233456666555555544
Q ss_pred HHHHHhcCeeccCCCCCCeEEcc-CCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSK-DPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~-~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.||++.. +.++.++|+|||++.....
T Consensus 119 l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 119 VKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp HHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred HHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 88899999999999999999932 1348899999999876543
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.36 E-value=3.6e-13 Score=147.65 Aligned_cols=81 Identities=21% Similarity=0.167 Sum_probs=61.2
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+++|||++|.+|.++.......+....+...+.+++ +..+|..|++|+|+||+|||++.+ +.++|+|||++.
T Consensus 88 ~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~--~~~kL~DfG~a~ 165 (327)
T 3lzb_A 88 TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAK 165 (327)
T ss_dssp SSSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEET--TEEEECCTTC--
T ss_pred cCCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCC--CCEEEccCccee
Confidence 5567899999999999887654444566666666665554 889999999999999999999865 899999999998
Q ss_pred ccChH
Q 002927 204 KLSSS 208 (864)
Q Consensus 204 ~l~~~ 208 (864)
.+...
T Consensus 166 ~~~~~ 170 (327)
T 3lzb_A 166 LLGAE 170 (327)
T ss_dssp -----
T ss_pred EccCc
Confidence 76543
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.36 E-value=6.4e-13 Score=160.46 Aligned_cols=135 Identities=16% Similarity=0.198 Sum_probs=93.4
Q ss_pred cccccccceeeEEEEec--CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATLV--DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~--~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+.||.|++|.||+|+.+ +|+.||||+..+....... . .+.+|
T Consensus 86 ~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~------------------------------~------~~~~E 129 (681)
T 2pzi_A 86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQ------------------------------A------MAMAE 129 (681)
T ss_dssp EEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHH------------------------------H------HHHHH
T ss_pred EEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHH------------------------------H------HHHHH
Confidence 67999999999999975 6899999987653221100 0 12334
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCC-----ceEEEeecCCcCCCChHHHhhcCCCHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSE-----TVLILEFMDGIRLNDCESLEAFGVNKQKVVE 159 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~-----~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~ 159 (864)
++.+.+++| + .|++++. ... .+|||||++|.+|.++.. ..++...+..
T Consensus 130 ~~~l~~l~h------------------p--~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~---~~l~~~~~~~ 186 (681)
T 2pzi_A 130 RQFLAEVVH------------------P--SIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKG---QKLPVAEAIA 186 (681)
T ss_dssp HGGGGGCCC------------------T--TBCCEEEEEEEECTTSCEEEEEEEECCCCEECC-------CCCCHHHHHH
T ss_pred HHHHHhcCC------------------C--CcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHh---CCCCHHHHHH
Confidence 444433321 1 2333332 222 489999999999998643 2566666666
Q ss_pred HHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 160 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 160 ~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+.+++ +..+|..||+|||+||+|||++. ++++|+|||+++.+..
T Consensus 187 ~~~qi~~aL~~lH~~giiHrDlkp~NIll~~---~~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 187 YLLEILPALSYLHSIGLVYNDLKPENIMLTE---EQLKLIDLGAVSRINS 233 (681)
T ss_dssp HHHHHHHHHHHHHHTTEECCCCSGGGEEECS---SCEEECCCTTCEETTC
T ss_pred HHHHHHHHHHHHHHCCCeecccChHHeEEeC---CcEEEEecccchhccc
Confidence 666655 88999999999999999999985 4899999999987654
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=1.2e-12 Score=143.96 Aligned_cols=80 Identities=19% Similarity=0.239 Sum_probs=60.2
Q ss_pred ceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCC-CCceEEEecccccc
Q 002927 129 TVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKK 204 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~ 204 (864)
.+|||||++|.+|.++..... ..++...+...+.+++ +..+|..|++|+|+||.||+++.++ ++.++|+|||++..
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~ 180 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE 180 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEecccccee
Confidence 589999999999988754322 2356666666555554 8889999999999999999998532 35699999999987
Q ss_pred cChH
Q 002927 205 LSSS 208 (864)
Q Consensus 205 l~~~ 208 (864)
....
T Consensus 181 ~~~~ 184 (336)
T 3fhr_A 181 TTQN 184 (336)
T ss_dssp C---
T ss_pred cccc
Confidence 6643
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=7.1e-13 Score=145.00 Aligned_cols=139 Identities=19% Similarity=0.185 Sum_probs=94.0
Q ss_pred cccccccceeeEEEEe------cCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATL------VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l------~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||+|++|.||+|+. .+|+.||||+.+...... .+.+
T Consensus 36 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 79 (327)
T 2yfx_A 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ------------------------------------DELD 79 (327)
T ss_dssp EECC--CSSCEEEEEC--------CCEEEEEECCSSCCHH------------------------------------HHHH
T ss_pred EEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchh------------------------------------hHHH
Confidence 6799999999999984 268899999876432211 1112
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh------cCCCH
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA------FGVNK 154 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~------~~~~~ 154 (864)
+.+|+..+.++.+ +. |.+++ . ....+|||||++|.+|.++..... ..+..
T Consensus 80 ~~~E~~~l~~l~h------------------~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 139 (327)
T 2yfx_A 80 FLMEALIISKFNH------------------QN--IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 139 (327)
T ss_dssp HHHHHHHHHHCCC------------------TT--BCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCH
T ss_pred HHHHHHHHhhCCC------------------CC--CCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccH
Confidence 4556666665422 11 23333 2 456789999999999998865332 22555
Q ss_pred HHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCC-CCceEEEeccccccc
Q 002927 155 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKL 205 (864)
Q Consensus 155 ~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l 205 (864)
..+...+.+++ +..+|..|++|+|+||.||+++.++ +..++|+|||++..+
T Consensus 140 ~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~ 193 (327)
T 2yfx_A 140 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 193 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECcccccccc
Confidence 55555555544 8889999999999999999998542 256999999988644
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=5.1e-13 Score=154.72 Aligned_cols=143 Identities=17% Similarity=0.210 Sum_probs=99.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+..... ..+ .-.+.+|+
T Consensus 28 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------------------~~~--------------~~~~~~E~ 72 (486)
T 3mwu_A 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK---------------------NKD--------------TSTILREV 72 (486)
T ss_dssp EEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB---------------------CSC--------------HHHHHHHH
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEeccccc---------------------chH--------------HHHHHHHH
Confidence 68999999999999986 8999999987521100 000 01134566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.+ ++ +.+-.++. ....++||||++|.+|.+... ....++...+...+.+++
T Consensus 73 ~~l~~l~h------------------pniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~i~~qi~~a 133 (486)
T 3mwu_A 73 ELLKKLDH------------------PNIMKLFEILEDSSSFYIVGELYTGGELFDEII-KRKRFSEHDAARIIKQVFSG 133 (486)
T ss_dssp HHHHHCCC------------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------CCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHH
Confidence 66555432 11 22222333 456789999999999977653 334566666666555554
Q ss_pred HHHHHhcCeeccCCCCCCeEEccC-CCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||+|||++.. .++.++|+|||++..+..
T Consensus 134 l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 134 ITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp HHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred HHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 888999999999999999999643 236899999999987654
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=2.7e-13 Score=145.98 Aligned_cols=139 Identities=15% Similarity=0.172 Sum_probs=86.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+......... .-++.+|+
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~e~ 64 (303)
T 2vwi_A 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS------------------------------------MDELLKEI 64 (303)
T ss_dssp EECC---CCCEEEEEC----CEEEEECCC---------------------------------------------------
T ss_pred heeccccceEEEEEEECCCCcEEEEEEEEhhhcchh------------------------------------HHHHHHHH
Confidence 68999999999999965 799999998654321100 00122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHh-------hcCCCHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE-------AFGVNKQKVV 158 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~-------~~~~~~~~l~ 158 (864)
+.+.+++ ++. |++++ . ....++||||++|.+|.++.... ...++...+.
T Consensus 65 ~~l~~l~------------------h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~ 124 (303)
T 2vwi_A 65 QAMSQCH------------------HPN--IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIA 124 (303)
T ss_dssp -CCCCCC------------------CTT--BCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHH
T ss_pred HHHhhcC------------------CCC--EeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHH
Confidence 3222221 122 33333 2 56788999999999998876431 1225555555
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 125 ~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~--~~~kl~dfg~~~~~~~ 173 (303)
T 2vwi_A 125 TILREVLEGLEYLHKNGQIHRDVKAGNILLGED--GSVQIADFGVSAFLAT 173 (303)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTT--CCEEECCCHHHHHCC-
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCC--CCEEEEeccchheecc
Confidence 5555544 788999999999999999999865 8999999999877654
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.3e-12 Score=142.03 Aligned_cols=139 Identities=17% Similarity=0.197 Sum_probs=94.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.+..-.... + .+.+|+
T Consensus 35 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----~---------------------------------~~~~E~ 77 (317)
T 2buj_A 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDR----E---------------------------------EAQREA 77 (317)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHH----H---------------------------------HHHHHH
T ss_pred EEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHH----H---------------------------------HHHHHH
Confidence 67999999999999975 899999998754322110 0 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-----cCCceEEEeecCCcCCCChHHHh---hcCCCHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-----SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEE 160 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-----~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~l~~~ 160 (864)
+.+.++.+ +.+ .+-..+. ....++||||++|.+|.++.... ...++...+...
T Consensus 78 ~~l~~l~h------------------~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i 139 (317)
T 2buj_A 78 DMHRLFNH------------------PNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWL 139 (317)
T ss_dssp HHHHTCCC------------------TTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHH
T ss_pred HHHhhcCC------------------CCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHH
Confidence 55444322 111 1111111 23567999999999998876532 234566666665
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 140 ~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~--~~~kl~dfg~~~~~~ 185 (317)
T 2buj_A 140 LLGICRGLEAIHAKGYAHRDLKPTNILLGDE--GQPVLMDLGSMNQAC 185 (317)
T ss_dssp HHHHHHHHHHHHHTTEECCCCCGGGEEECTT--SCEEECCCSSCEESC
T ss_pred HHHHHHHHHHHHhCCcccCCCCHHHEEEcCC--CCEEEEecCcchhcc
Confidence 55554 888999999999999999999865 899999999987654
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=7.3e-13 Score=153.77 Aligned_cols=143 Identities=13% Similarity=0.172 Sum_probs=93.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+......- ..-.+.+|+
T Consensus 43 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-----------------------------------~~~~~~~E~ 87 (494)
T 3lij_A 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTS-----------------------------------SNSKLLEEV 87 (494)
T ss_dssp EEEECC---EEEEEEETTTCCEEEEEEEEC-----C-----------------------------------TTHHHHHHH
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEeccccCch-----------------------------------HHHHHHHHH
Confidence 67999999999999986 899999999764321100 001133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.+ ++ +.+-.++. ....+|||||++|.+|.+... ....+....+...+.+++
T Consensus 88 ~~l~~l~h------------------pniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~-~~~~~~~~~~~~i~~qi~~~ 148 (494)
T 3lij_A 88 AVLKLLDH------------------PNIMKLYDFFEDKRNYYLVMECYKGGELFDEII-HRMKFNEVDAAVIIKQVLSG 148 (494)
T ss_dssp HHHTTCCC------------------TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------CCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 55444321 22 12222222 456789999999999877643 334566665555555544
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCC-CCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||.|||++... ++.++|+|||++..+..
T Consensus 149 l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 149 VTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp HHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred HHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 8889999999999999999997532 35699999999876643
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.5e-12 Score=151.45 Aligned_cols=150 Identities=15% Similarity=0.195 Sum_probs=96.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHH--HHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTI--ILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~--~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
+.||+|++|.||+|+.+ +|+.||||+.+...... ...+.. ..++..+ .+.+
T Consensus 42 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~--------------------~~~~~~~------~~~~ 95 (504)
T 3q5i_A 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNK--------------------NIEKFHE------EIYN 95 (504)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEC------------------------------------CTHH------HHHH
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccch--------------------hhHHHHH------HHHH
Confidence 78999999999999976 78999999976543211 000000 0001111 1444
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHH
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 163 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~ 163 (864)
|++.+.++.+ +. |++++ . ....+|||||++|.+|.+... ....++...+...+.+
T Consensus 96 E~~~l~~l~h------------------pn--iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~i~~q 154 (504)
T 3q5i_A 96 EISLLKSLDH------------------PN--IIKLFDVFEDKKYFYLVTEFYEGGELFEQII-NRHKFDECDAANIMKQ 154 (504)
T ss_dssp HHHHHHTCCC------------------TT--BCCEEEEEECSSEEEEEEECCTTCBHHHHHH-HHSCCCHHHHHHHHHH
T ss_pred HHHHHHhCCC------------------CC--CCeEEEEEEcCCEEEEEEecCCCCcHHHHHH-HcCCCCHHHHHHHHHH
Confidence 5555554422 11 33333 3 455789999999999977653 3345666666665555
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCC-CceEEEecccccccCh
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPP-HRPILLDFGLTKKLSS 207 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~-g~i~LiDFG~~~~l~~ 207 (864)
++ +..+|..|++|||+||.|||++.++. ..++|+|||++..+..
T Consensus 155 i~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 201 (504)
T 3q5i_A 155 ILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK 201 (504)
T ss_dssp HHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCT
T ss_pred HHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCC
Confidence 54 88999999999999999999986521 3699999999987654
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.4e-12 Score=156.41 Aligned_cols=140 Identities=19% Similarity=0.211 Sum_probs=100.4
Q ss_pred cccccccceeeEEEEec----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|++|.||+|+.. .+..||||+.+........ -.|.
T Consensus 396 ~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~~ 439 (656)
T 2j0j_A 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR------------------------------------EKFL 439 (656)
T ss_dssp EEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHH------------------------------------HHHH
T ss_pred eEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHH------------------------------------HHHH
Confidence 56999999999999975 2467999987654322111 0144
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---ecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 163 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~ 163 (864)
+|+..+.++.+ ++ |.+++ .....+|||||++|.+|.++........+...+...+.+
T Consensus 440 ~E~~~l~~l~H------------------pn--Iv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~q 499 (656)
T 2j0j_A 440 QEALTMRQFDH------------------PH--IVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ 499 (656)
T ss_dssp HHHHHHHHCCC------------------TT--BCCEEEEECSSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHH
T ss_pred HHHHHHHhCCC------------------CC--CCeEEEEEecCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHH
Confidence 56666665432 11 22333 255678999999999999886544445666666555555
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
++ +..+|..|++|||+||.|||++.+ +.++|+|||++..+...
T Consensus 500 i~~aL~~LH~~givHrDikp~NILl~~~--~~vkL~DFG~a~~~~~~ 544 (656)
T 2j0j_A 500 LSTALAYLESKRFVHRDIAARNVLVSSN--DCVKLGDFGLSRYMEDS 544 (656)
T ss_dssp HHHHHHHHHHTTCCCSCCSGGGEEEEET--TEEEECCCCCCCSCCC-
T ss_pred HHHHHHHHHhCCccccccchHhEEEeCC--CCEEEEecCCCeecCCC
Confidence 44 889999999999999999999965 89999999999887653
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.35 E-value=7.9e-13 Score=143.44 Aligned_cols=148 Identities=17% Similarity=0.097 Sum_probs=100.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.+........ ....+..+.+|.
T Consensus 37 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-------------------------------~~~~~~~~~~e~ 85 (312)
T 2iwi_A 37 PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWS-------------------------------PLSDSVTCPLEV 85 (312)
T ss_dssp EEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC---------------------------------------CCCCHHH
T ss_pred eEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccc-------------------------------cchhhHHHHHHH
Confidence 68999999999999975 7999999997643221100 001223455677
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEee-cCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEF-MDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~-i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
+.+.++..... + ..|.+++. ....++|||| ++|.+|.++... ...++...+...+.++
T Consensus 86 ~~l~~l~~~~~--------------h--~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi 148 (312)
T 2iwi_A 86 ALLWKVGAGGG--------------H--PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITE-KGPLGEGPSRCFFGQV 148 (312)
T ss_dssp HHHHHHHSSCC--------------C--SSBCCEEEEC-----CEEEEECCSSEEEHHHHHHH-HCSCCHHHHHHHHHHH
T ss_pred HHHHhhcccCC--------------C--CCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHH
Confidence 77777643111 1 12334432 4567899999 899999887643 3346666666555554
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+|..|++|+|+||.||+++.+ ++.++|+|||++..+..
T Consensus 149 ~~~l~~lH~~~i~H~dlkp~Nil~~~~-~~~~kl~dfg~~~~~~~ 192 (312)
T 2iwi_A 149 VAAIQHCHSRGVVHRDIKDENILIDLR-RGCAKLIDFGSGALLHD 192 (312)
T ss_dssp HHHHHHHHHHTEECCCCSGGGEEEETT-TTEEEECCCSSCEECCS
T ss_pred HHHHHHHHHCCeeecCCChhhEEEeCC-CCeEEEEEcchhhhccc
Confidence 4 888999999999999999999832 38999999999887654
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.3e-12 Score=140.20 Aligned_cols=141 Identities=13% Similarity=0.072 Sum_probs=94.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
..||.|++|+||+|+.. +|+.||||+.+..-.... + .+.+|+
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-------------------------------~------~~~~e~ 70 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS-------------------------------Q------PLHEEI 70 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC----------------------------------H------HHHHHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHH-------------------------------H------HHHHHH
Confidence 47999999999999975 799999998764321100 0 133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhc--CCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF--GVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~--~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ +. +.+-.++. ....++||||++|.+|.++...... ..+...+...+.+++
T Consensus 71 ~~l~~l~h------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~ 132 (295)
T 2clq_A 71 ALHKHLKH------------------KNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL 132 (295)
T ss_dssp HHHHTCCC------------------TTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------CCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHH
Confidence 44444321 11 11222222 4567899999999999887653321 233444444333333
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.||+++.. ++.++|+|||++..+..
T Consensus 133 ~~l~~lH~~~i~H~dl~p~Nil~~~~-~~~~kl~Dfg~~~~~~~ 175 (295)
T 2clq_A 133 EGLKYLHDNQIVHRDIKGDNVLINTY-SGVLKISDFGTSKRLAG 175 (295)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEEETT-TCCEEECCTTTCEESCC
T ss_pred HHHHHHHhCCEEccCCChhhEEEECC-CCCEEEeecccccccCC
Confidence 788999999999999999999862 48999999999987654
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=99.34 E-value=8.9e-13 Score=143.77 Aligned_cols=144 Identities=19% Similarity=0.212 Sum_probs=96.5
Q ss_pred cccccccceeeEEEEec--CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATLV--DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~--~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+.||+|++|.||+|+.. +|+.||||+.+...... .....+.+|
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~-----------------------------------~~~~~~~~e 61 (326)
T 1blx_A 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-----------------------------------GMPLSTIRE 61 (326)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-----------------------------------SCBCTHHHH
T ss_pred eeecccccEEEEEEEecCCCCEEEEEEEeccCcccc-----------------------------------cCCchhhHH
Confidence 78999999999999973 68999999876432110 011124445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe------cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ------SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEE 160 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~------~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~ 160 (864)
.+.++++... . ++. +.+-.++. ....+|||||++| +|.++.... ...+....+...
T Consensus 62 ~~~l~~l~~~-~--------------h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~ 125 (326)
T 1blx_A 62 VAVLRHLETF-E--------------HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDM 125 (326)
T ss_dssp HHHHHHHHHT-C--------------CTTBCCEEEEEEEEECSSEEEEEEEEECCSC-BHHHHHHHSCTTCSCHHHHHHH
T ss_pred HHHHHhhhcc-C--------------CCCeEeeeeeeeecccCCCceEEEEEecCCC-CHHHHHHhcccCCCCHHHHHHH
Confidence 5555555431 1 111 11212221 2446899999996 776664322 123566666665
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..++.
T Consensus 126 ~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~--~~~kl~Dfg~~~~~~~ 172 (326)
T 1blx_A 126 MFQLLRGLDFLHSHRVVHRDLKPQNILVTSS--GQIKLADFGLARIYSF 172 (326)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCCGGGEEECTT--CCEEECSCCSCCCCCG
T ss_pred HHHHHHHHHHHHHCCceeccCCHHHeEEcCC--CCEEEecCcccccccC
Confidence 55554 888999999999999999999865 8999999999987654
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=7.4e-13 Score=146.91 Aligned_cols=150 Identities=16% Similarity=0.180 Sum_probs=92.1
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|+..+|+.||||+.+......-.... ..- ....+ .+.+|++
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~----------------~~~----~~~~~------~~~~E~~ 81 (362)
T 3pg1_A 28 RFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNI----------------LSD----SFLCK------RVLREIR 81 (362)
T ss_dssp EEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEG----------------GGS----HHHHH------HHHHHHH
T ss_pred EEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhh----------------hhh----hhHHH------HHHHHHH
Confidence 689999999999999888999999987543221000000 000 00001 1445666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
.+.++++.. -+.+-.++. ....+|||||++| ++.+........++...+...+.++
T Consensus 82 ~l~~l~h~~-----------------iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi 143 (362)
T 3pg1_A 82 LLNHFHHPN-----------------ILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHI 143 (362)
T ss_dssp HHHHCCCTT-----------------BCCCSEEEEECCTTTCCEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHH
T ss_pred HHHhCCCcC-----------------ccceeeeEEeccCCCcceEEEEEccCCC-CHHHHHHhcccCCCHHHHHHHHHHH
Confidence 666653210 111222221 1235899999996 4444433222345666666555554
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
+ +..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 144 ~~~l~~lH~~~ivH~Dlkp~NIl~~~~--~~~kl~Dfg~~~~~~ 185 (362)
T 3pg1_A 144 LLGLHVLHEAGVVHRDLHPGNILLADN--NDITICDFNLAREDT 185 (362)
T ss_dssp HHHHHHHHHTTCCCCCCCGGGEEECTT--CCEEECCTTC-----
T ss_pred HHHHHHHHHCcCEecCCChHHEEEcCC--CCEEEEecCcccccc
Confidence 4 888999999999999999999865 899999999987543
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.34 E-value=6.1e-13 Score=146.43 Aligned_cols=145 Identities=18% Similarity=0.142 Sum_probs=96.5
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+...... .... .-...-.+.+|+
T Consensus 30 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~--------------------~~~~---------~~~~~~~~~~E~ 80 (335)
T 3dls_A 30 SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLE--------------------DCWI---------EDPKLGKVTLEI 80 (335)
T ss_dssp EECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCT--------------------TSEE---------EETTTEEEEHHH
T ss_pred eEEEecCCEEEEEEEECCCCcEEEEEEEehhhccc--------------------cccc---------chHHHHHHHHHH
Confidence 68999999999999975 89999999876542100 0000 000011244466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCc-CCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGI-RLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~-~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
+.+.++++ + .|.+++ . ....+|||||+.+. +|.++.. ....++...+...+.++
T Consensus 81 ~~l~~l~h------------------~--~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~-~~~~l~~~~~~~i~~qi 139 (335)
T 3dls_A 81 AILSRVEH------------------A--NIIKVLDIFENQGFFQLVMEKHGSGLDLFAFID-RHPRLDEPLASYIFRQL 139 (335)
T ss_dssp HHHTTCCC------------------T--TBCCEEEEEECSSEEEEEEECCTTSCBHHHHHH-TCCCCCHHHHHHHHHHH
T ss_pred HHHHhCCC------------------C--CEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHH-hcCCCCHHHHHHHHHHH
Confidence 55555422 1 123333 2 45578999998554 7776643 22245666655555554
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 140 ~~~L~~LH~~~ivH~Dlkp~NIll~~~--~~~kL~Dfg~a~~~~~ 182 (335)
T 3dls_A 140 VSAVGYLRLKDIIHRDIKDENIVIAED--FTIKLIDFGSAAYLER 182 (335)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEECTT--SCEEECCCTTCEECCT
T ss_pred HHHHHHHHhCCeEEeccCHHHEEEcCC--CcEEEeecccceECCC
Confidence 4 888999999999999999999865 8999999999987653
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.4e-12 Score=141.55 Aligned_cols=139 Identities=16% Similarity=0.155 Sum_probs=87.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+....-..... .+.+|+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-------------------------------------~~~~e~ 59 (320)
T 2i6l_A 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVK-------------------------------------HALREI 59 (320)
T ss_dssp EECC-----CEEEEEETTTTEEEEEEEEECCSHHHHH-------------------------------------HHHHHH
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHH-------------------------------------HHHHHH
Confidence 68999999999999986 6999999987654321100 123355
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---------------cCCceEEEeecCCcCCCChHHHhhcCCCH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------------SSETVLILEFMDGIRLNDCESLEAFGVNK 154 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---------------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~ 154 (864)
+.+.++.+. .-+.+-.++. ....++||||++| +|.++. .......
T Consensus 60 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~--~~~~~~~ 119 (320)
T 2i6l_A 60 KIIRRLDHD-----------------NIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVL--EQGPLLE 119 (320)
T ss_dssp HHHHTCCCT-----------------TBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCSE-EHHHHH--TTCCCCH
T ss_pred HHHHhcCCC-----------------CeeEEEEeccccccccccccccccccCceeEEeeccCC-CHHHHh--hcCCccH
Confidence 444443221 0111111111 2345799999986 676653 3344565
Q ss_pred HHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 155 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 155 ~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+...+.+++ +..+|..|++|+|+||.||+++.+ ++.++|+|||++..+..
T Consensus 120 ~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~-~~~~kl~Dfg~~~~~~~ 173 (320)
T 2i6l_A 120 EHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTE-DLVLKIGDFGLARIMDP 173 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETT-TTEEEECCCTTCBCC--
T ss_pred HHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC-CCeEEEccCccccccCC
Confidence 55555544444 888999999999999999999743 37899999999987654
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=4.2e-13 Score=155.32 Aligned_cols=142 Identities=17% Similarity=0.167 Sum_probs=97.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+........ .... -.+.+|+
T Consensus 32 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------~~~~--------------~~~~~E~ 77 (484)
T 3nyv_A 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ--------------------KTDK--------------ESLLREV 77 (484)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCB--------------------SSCH--------------HHHHHHH
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEEEhhhccc--------------------chHH--------------HHHHHHH
Confidence 67999999999999986 89999999875321100 0000 0133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ ++ |++++ . ....++||||++|.+|.+... ....+....+...+.+++
T Consensus 78 ~~l~~l~h------------------pn--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~i~~qi~ 136 (484)
T 3nyv_A 78 QLLKQLDH------------------PN--IMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARIIRQVL 136 (484)
T ss_dssp HHHTTCCC------------------TT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHH-TCSCCBHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------CC--CCcEEEEEEeCCEEEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 54444321 11 33333 2 456789999999999977643 233456665555555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccC-CCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||.|||++.. .++.++|+|||++..+..
T Consensus 137 ~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 137 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp HHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred HHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 888999999999999999999532 247899999999877654
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=9.5e-13 Score=144.00 Aligned_cols=139 Identities=18% Similarity=0.187 Sum_probs=95.0
Q ss_pred cccccccceeeEEEEec-CCCEE--EEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQV--VVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 87 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~V--AVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 87 (864)
+.||+|++|.||+|+.+ +|+.| |||+.+....... .-.+.+
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~------------------------------------~~~~~~ 74 (327)
T 1fvr_A 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD------------------------------------HRDFAG 74 (327)
T ss_dssp EEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------------------------------------------CHHHH
T ss_pred eeeecCCCceEEEEEEccCCcccceeeeeeccccchHH------------------------------------HHHHHH
Confidence 68999999999999976 67755 8998764322110 011344
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhh--------------
Q 002927 88 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-------------- 149 (864)
Q Consensus 88 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~-------------- 149 (864)
|++.+.++. .++ .|++++ . ....+|||||++|.+|.++.....
T Consensus 75 E~~~l~~l~-----------------~hp--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 135 (327)
T 1fvr_A 75 ELEVLCKLG-----------------HHP--NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST 135 (327)
T ss_dssp HHHHHTTCC-----------------CCT--TBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTB
T ss_pred HHHHHHhcc-----------------CCC--chhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccc
Confidence 555544431 111 133333 2 456789999999999988754221
Q ss_pred -cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 150 -FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 150 -~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 136 ~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~--~~~kL~Dfg~~~~~~ 193 (327)
T 1fvr_A 136 ASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN--YVAKIADFGLSRGQE 193 (327)
T ss_dssp SCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGG--GCEEECCTTCEESSC
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCC--CeEEEcccCcCcccc
Confidence 1356666666665554 888999999999999999999865 899999999987443
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=9.5e-13 Score=142.88 Aligned_cols=143 Identities=20% Similarity=0.198 Sum_probs=89.9
Q ss_pred cccccccceeeEEEEec----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|++|.||+|+.. +++.||||+.+......- +. -.+.
T Consensus 40 ~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~--~~---------------------------------~~~~ 84 (313)
T 3brb_A 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQR--EI---------------------------------EEFL 84 (313)
T ss_dssp EEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHH--HH---------------------------------HHHH
T ss_pred cceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchh--HH---------------------------------HHHH
Confidence 67999999999999864 355899998764321100 00 0134
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-c-----CCceEEEeecCCcCCCChHHHh-----hcCCCHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S-----SETVLILEFMDGIRLNDCESLE-----AFGVNKQ 155 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~-----~~~vLvmE~i~G~~L~~~~~~~-----~~~~~~~ 155 (864)
+|++.+.++++.. -+.+-.++. . ...+++|||++|.+|.++.... ...++..
T Consensus 85 ~e~~~l~~l~h~~-----------------iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 147 (313)
T 3brb_A 85 SEAACMKDFSHPN-----------------VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQ 147 (313)
T ss_dssp HHHHHHHTCCCTT-----------------BCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHH
T ss_pred HHHHHHhcCCCCC-----------------eeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHH
Confidence 4666555543210 111112221 1 1348999999999998875322 1235566
Q ss_pred HHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 156 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 156 ~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 148 ~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~--~~~kl~Dfg~~~~~~~ 199 (313)
T 3brb_A 148 TLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDD--MTVCVADFGLSKKIYS 199 (313)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTT--SCEEECSCSCC-----
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCC--CcEEEeecCcceeccc
Confidence 6666555554 888999999999999999999865 8999999999887654
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.33 E-value=7.8e-13 Score=145.71 Aligned_cols=156 Identities=15% Similarity=0.140 Sum_probs=97.5
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|+. +|+.||||+.+........... ............. -.+.+|++
T Consensus 37 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~----------~~~~~~~~~~~~~----------~~~~~E~~ 95 (348)
T 2pml_X 37 RTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFT----------KSNNDKISIKSKY----------DDFKNELQ 95 (348)
T ss_dssp EEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEEC----------CCSSSSCCEEEHH----------HHHHHHHH
T ss_pred EEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhc----------cccchhhhHHhHH----------HHHHHHHH
Confidence 6899999999999998 9999999987632110000000 0000000000000 12445665
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCCh------HHHh-hcCCCHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDC------ESLE-AFGVNKQKVVEEI 161 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~------~~~~-~~~~~~~~l~~~~ 161 (864)
.+.++++ +. +.+-.++. ....++||||++|.+|.++ .... ....+...+...+
T Consensus 96 ~l~~l~h------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~ 157 (348)
T 2pml_X 96 IITDIKN------------------EYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCII 157 (348)
T ss_dssp HHTTCCC------------------TTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHH
T ss_pred HHHhCCC------------------CCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHH
Confidence 5555422 11 11112222 4567899999999999986 3211 2345555555555
Q ss_pred HHHH--HHHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 162 TRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 162 ~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+++ +..+|. .|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 158 ~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~--~~~kl~dfg~~~~~~~ 204 (348)
T 2pml_X 158 KSVLNSFSYIHNEKNICHRDVKPSNILMDKN--GRVKLSDFGESEYMVD 204 (348)
T ss_dssp HHHHHHHHHHHHTSCEECCCCCGGGEEECTT--SCEEECCCTTCEECBT
T ss_pred HHHHHHHHHHhccCCEeecCCChHhEEEcCC--CcEEEecccccccccc
Confidence 5544 788998 999999999999999865 8999999999887543
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1.5e-12 Score=139.63 Aligned_cols=141 Identities=13% Similarity=0.053 Sum_probs=94.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +++.||||+......... +. + .+.+|+
T Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~--~~---------------------------~------~~~~e~ 76 (290)
T 1t4h_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKS--ER---------------------------Q------RFKEEA 76 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHH--HH---------------------------H------HHHHHH
T ss_pred eeccCCCCeEEEEeEecCCceEEEEEEecchhhCHH--HH---------------------------H------HHHHHH
Confidence 46999999999999976 789999998764321110 00 0 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~ 163 (864)
+.+.++++ ++ +.+-.++. ....+|||||++|.+|.++... ....+...+...+.+
T Consensus 77 ~~l~~l~h------------------~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~q 137 (290)
T 1t4h_A 77 EMLKGLQH------------------PNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR-FKVMKIKVLRSWCRQ 137 (290)
T ss_dssp HHHTTCCC------------------TTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHH
T ss_pred HHHHhCCC------------------CCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHH-ccCCCHHHHHHHHHH
Confidence 44444321 11 11112221 1236899999999999887642 244566655555555
Q ss_pred HH--HHHHHhcC--eeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 164 AY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 164 ~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
++ +..+|..| ++|+|+||.||+++.+ ++.++|+|||++....
T Consensus 138 i~~~l~~lH~~~~~i~H~dikp~Nil~~~~-~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 138 ILKGLQFLHTRTPPIIHRDLKCDNIFITGP-TGSVKIGDLGLATLKR 183 (290)
T ss_dssp HHHHHHHHHTSSSCCCCSCCCGGGEEESST-TSCEEECCTTGGGGCC
T ss_pred HHHHHHHHHcCCCCEEECCCCHHHEEEECC-CCCEEEeeCCCccccc
Confidence 44 88899999 9999999999999732 4899999999986544
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.33 E-value=8e-13 Score=148.17 Aligned_cols=77 Identities=23% Similarity=0.283 Sum_probs=56.1
Q ss_pred ceEEEeecCCcCCCChHHH---hhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 129 TVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~---~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
.+|||||++| +|.+.... ....+....+...+.+++ +..+|..|++|||+||+||+++.+ ++.++|+|||++.
T Consensus 113 ~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~-~~~~kl~Dfg~a~ 190 (383)
T 3eb0_A 113 LNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSK-DNTLKLCDFGSAK 190 (383)
T ss_dssp EEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETT-TTEEEECCCTTCE
T ss_pred EEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCC-CCcEEEEECCCCc
Confidence 5699999997 55544321 123355555555444444 788999999999999999999742 4899999999998
Q ss_pred ccCh
Q 002927 204 KLSS 207 (864)
Q Consensus 204 ~l~~ 207 (864)
.+..
T Consensus 191 ~~~~ 194 (383)
T 3eb0_A 191 KLIP 194 (383)
T ss_dssp ECCT
T ss_pred ccCC
Confidence 6643
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.2e-12 Score=140.30 Aligned_cols=143 Identities=17% Similarity=0.197 Sum_probs=97.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+...... ... -.+.+|+
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~---------------------~~~--------------~~~~~e~ 72 (287)
T 2wei_A 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN---------------------KDT--------------STILREV 72 (287)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSS---------------------SCH--------------HHHHHHH
T ss_pred EEEcCCCCEEEEEEEEcCCCcEEEEEEecccccch---------------------HHH--------------HHHHHHH
Confidence 67999999999999986 79999999975422110 000 0133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.+ +. +.+-.++. ....++||||++|.+|.+... ....++...+...+.+++
T Consensus 73 ~~l~~l~h------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~ 133 (287)
T 2wei_A 73 ELLKKLDH------------------PNIMKLFEILEDSSSFYIVGELYTGGELFDEII-KRKRFSEHDAARIIKQVFSG 133 (287)
T ss_dssp HHHHTCCC------------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHH
T ss_pred HHHHhccC------------------CCccEEEEEEeCCCeEEEEEEccCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHH
Confidence 55544321 11 11222222 456789999999999877653 234566666666555554
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCC-CCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|+|+||.||+++.++ ++.++|+|||++..+..
T Consensus 134 l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 134 ITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp HHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred HHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 7889999999999999999997542 35799999999876643
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=2e-12 Score=140.46 Aligned_cols=140 Identities=15% Similarity=0.187 Sum_probs=95.1
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|+..+|+.||||+.+......- .. -.+.+|++
T Consensus 34 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~--~~---------------------------------~~~~~E~~ 78 (313)
T 3cek_A 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQ--TL---------------------------------DSYRNEIA 78 (313)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHH--HH---------------------------------HHHHHHHH
T ss_pred EEecCCCCEEEEEEEcCCCcEEEEEEecccccccc--ch---------------------------------HHHHHHHH
Confidence 67999999999999988899999999764321110 00 01445666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.+.++++.. + .|.+++ . ....+|+|| +.|.+|.++... ...++...+...+.+++
T Consensus 79 ~l~~l~~~~----------------~--~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~ 138 (313)
T 3cek_A 79 YLNKLQQHS----------------D--KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKK-KKSIDPWERKSYWKNMLE 138 (313)
T ss_dssp HHHHHGGGC----------------T--TBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHH-CSSCCHHHHHHHHHHHHH
T ss_pred HHHhccccC----------------C--ceEEEEEEeecCCEEEEEEe-cCCCcHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 666665411 1 122333 2 455789999 567788877542 23455555555444444
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|+|+||+||++++ +.++|+|||++..+...
T Consensus 139 aL~~LH~~~ivH~dlkp~NIl~~~---~~~kL~Dfg~~~~~~~~ 179 (313)
T 3cek_A 139 AVHTIHQHGIVHSDLKPANFLIVD---GMLKLIDFGIANQMQPD 179 (313)
T ss_dssp HHHHHHHTTCCCCCCCGGGEEEET---TEEEECCCSSSCC----
T ss_pred HHHHHHHCCceecCCCcccEEEEC---CeEEEeeccccccccCc
Confidence 88899999999999999999962 79999999999877543
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.8e-12 Score=140.12 Aligned_cols=141 Identities=19% Similarity=0.165 Sum_probs=95.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+....-.... -.+.+|.
T Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-------------------------------------~~~~~e~ 76 (337)
T 3ll6_A 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKN-------------------------------------RAIIQEV 76 (337)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHH-------------------------------------HHHHHHH
T ss_pred EEEccCCceEEEEEEECCCCcEEEEEEecCCchHHH-------------------------------------HHHHHHH
Confidence 67999999999999975 899999998754422110 0133466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe---------cCCceEEEeecCCcCCCChHHH--hhcCCCHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ---------SSETVLILEFMDGIRLNDCESL--EAFGVNKQKV 157 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~---------~~~~vLvmE~i~G~~L~~~~~~--~~~~~~~~~l 157 (864)
..+.++.. +++ +.+-..+. ....+++|||++| +|.++... ....++...+
T Consensus 77 ~~l~~l~~-----------------h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g-~L~~~l~~~~~~~~~~~~~~ 138 (337)
T 3ll6_A 77 CFMKKLSG-----------------HPNIVQFCSAASIGKEESDTGQAEFLLLTELCKG-QLVEFLKKMESRGPLSCDTV 138 (337)
T ss_dssp HHHHHHTT-----------------STTBCCEEEEEEECTTTSTTSSEEEEEEEECCSE-EHHHHHHHHHTTCSCCHHHH
T ss_pred HHHHHhcc-----------------CCChhhccccccccccccccCCceEEEEEEecCC-CHHHHHHHhhccCCCCHHHH
Confidence 66666531 111 11111110 1225899999986 55555432 1223666666
Q ss_pred HHHHHHHH--HHHHHhcC--eeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 158 VEEITRAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 158 ~~~~~~~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
...+.+++ +..+|..| ++|+|+||.|||++.+ ++++|+|||++..+...
T Consensus 139 ~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~--~~~kl~Dfg~~~~~~~~ 191 (337)
T 3ll6_A 139 LKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQ--GTIKLCDFGSATTISHY 191 (337)
T ss_dssp HHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTT--SCEEBCCCTTCBCCSSC
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCC--CCEEEecCccceecccc
Confidence 66555554 88899999 9999999999999865 89999999999887654
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.30 E-value=2e-12 Score=146.04 Aligned_cols=141 Identities=14% Similarity=0.162 Sum_probs=84.3
Q ss_pred cccccccccceeeEEEEec---CCCEEEEEEecCCh-HHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 9 VETPLATASIAQVHRATLV---DGRQVVVKVQHQGI-KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 9 d~~plasaSigqV~~A~l~---~G~~VAVKv~~p~i-~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
..+.||.|++|.||+|+.+ +++.||||+....- ...
T Consensus 25 ~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~---------------------------------------- 64 (405)
T 3rgf_A 25 EGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMS---------------------------------------- 64 (405)
T ss_dssp SSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHH----------------------------------------
T ss_pred cCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHH----------------------------------------
Confidence 3467999999999999965 58899999875321 111
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhh--------cCCC
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEA--------FGVN 153 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~--------~~~~ 153 (864)
+.+|++.+.++++. .-+.+-.++. ....+|||||++| +|.++..... ..+.
T Consensus 65 ~~~E~~~l~~l~hp-----------------niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~ 126 (405)
T 3rgf_A 65 ACREIALLRELKHP-----------------NVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLP 126 (405)
T ss_dssp HHHHHHHHHHCCCT-----------------TBCCCCEEEEETTTTEEEEEEECCSE-EHHHHHHHHHHHC-------CC
T ss_pred HHHHHHHHHhcCCC-----------------CeeeEeeEEecCCCCeEEEEEeCCCC-CHHHHHHHhccccccccccCCC
Confidence 23455555554321 0122223332 3456899999987 4444432211 1245
Q ss_pred HHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccC--CCCceEEEecccccccCh
Q 002927 154 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 154 ~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~~ 207 (864)
...+...+.+++ +..+|..|++|||+||+|||+..+ .++.++|+|||++..+..
T Consensus 127 ~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~ 184 (405)
T 3rgf_A 127 RGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCC
Confidence 555555554444 888999999999999999999421 248999999999987653
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.30 E-value=1.6e-12 Score=142.01 Aligned_cols=146 Identities=18% Similarity=0.129 Sum_probs=99.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.. +|+.||||+.+....... ..+..+-.+.+|+
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-------------------------------~~~~~~~~~~~E~ 97 (320)
T 3a99_A 49 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-------------------------------GELPNGTRVPMEV 97 (320)
T ss_dssp EECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCE-------------------------------EECTTCCEEEHHH
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhh-------------------------------hhhhhhhHHHHHH
Confidence 68999999999999975 899999998764321000 0001122345566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCC-cCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDG-IRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G-~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
..+.++.+. ...+++++ . ....+++||++++ .+|.++... ...++...+...+.++
T Consensus 98 ~~l~~l~~~------------------~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi 158 (320)
T 3a99_A 98 VLLKKVSSG------------------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQV 158 (320)
T ss_dssp HHHHHHCSS------------------SCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHH-HCSCCHHHHHHHHHHH
T ss_pred HHHHhhccC------------------CCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhc-cCCCCHHHHHHHHHHH
Confidence 666665321 11233333 2 4567899999986 788777542 3345665555555554
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+ +..+|..|++|+|+||.||+++.+ ++.++|+|||++..+..
T Consensus 159 ~~~L~~LH~~~ivH~Dlkp~NIll~~~-~~~~kL~Dfg~~~~~~~ 202 (320)
T 3a99_A 159 LEAVRHCHNCGVLHRDIKDENILIDLN-RGELKLIDFGSGALLKD 202 (320)
T ss_dssp HHHHHHHHHTTEECCCCSGGGEEEETT-TTEEEECCCTTCEECCS
T ss_pred HHHHHHHHHCCcEeCCCCHHHEEEeCC-CCCEEEeeCcccccccc
Confidence 4 888999999999999999999842 38999999999887653
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.30 E-value=4.1e-12 Score=137.82 Aligned_cols=139 Identities=14% Similarity=0.172 Sum_probs=81.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+........ .+ +..|.
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--~~----------------------------------~~~~~ 74 (318)
T 2dyl_A 31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEEN--KR----------------------------------ILMDL 74 (318)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEETTSCHHHH--HH----------------------------------HHHHH
T ss_pred ceeeecCCeeEEEEEEecCCeEEEEEEecccccchHH--HH----------------------------------HHHHH
Confidence 68999999999999986 8999999998754322110 00 01111
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
.. +.... .++ .|.+++ . ....+|||||+ |..+..+.......++...+...+.+++
T Consensus 75 ~~---~~~~~--------------~h~--~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 134 (318)
T 2dyl_A 75 DV---VLKSH--------------DCP--YIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIV 134 (318)
T ss_dssp HH---HHHTT--------------TCT--TBCCEEEEEECSSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred HH---HHHhc--------------CCC--ceeeEEEEEecCCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHH
Confidence 11 11111 111 233333 2 45678999999 5454444332234566666555555544
Q ss_pred --HHHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 --AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|. +|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 135 ~~l~~lH~~~~i~H~dlkp~Nil~~~~--~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 135 KALYYLKEKHGVIHRDVKPSNILLDER--GQIKLCDFGISGRLVD 177 (318)
T ss_dssp HHHHHHHHHHCCCCCCCCGGGEEECTT--SCEEECCCTTC-----
T ss_pred HHHHHHHhhCCEEeCCCCHHHEEECCC--CCEEEEECCCchhccC
Confidence 788898 499999999999999865 8999999999876654
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=99.30 E-value=1.5e-12 Score=147.88 Aligned_cols=138 Identities=20% Similarity=0.180 Sum_probs=88.8
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
.+.||.|++|.||+|+.+ +|+.||||+...+... ..+|
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~-----------------------------------------~~~E 97 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-----------------------------------------KNRE 97 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTS-----------------------------------------CCHH
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEecccchh-----------------------------------------HHHH
Confidence 367999999999999986 7999999987543210 1124
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---c--C--CceEEEeecCCcCCCChHH-H--hhcCCCHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---S--S--ETVLILEFMDGIRLNDCES-L--EAFGVNKQKVV 158 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~--~--~~vLvmE~i~G~~L~~~~~-~--~~~~~~~~~l~ 158 (864)
++.+.++++. .-+.+-.++. . . ..+|||||++|. +.+... . ....+....+.
T Consensus 98 ~~il~~l~hp-----------------niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~l~~~~~~ 159 (420)
T 1j1b_A 98 LQIMRKLDHC-----------------NIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIYVK 159 (420)
T ss_dssp HHHHHTCCCT-----------------TBCCEEEEEEEEETTTTEEEEEEEEECCCEE-HHHHHHHHHHTTCCCCHHHHH
T ss_pred HHHHHHcCCC-----------------CccceeeEEeccCCCCcceeEEeehhccccc-HHHHHHHHhhccCCCCHHHHH
Confidence 4444443221 0122222222 1 1 146899999973 333221 1 12335555554
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+.+++ +..+|..||+|||+||+|||++.+ ++.++|+|||+++.+..
T Consensus 160 ~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~-~~~~kl~DFG~a~~~~~ 209 (420)
T 1j1b_A 160 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVR 209 (420)
T ss_dssp HHHHHHHHHHHHHHTTTEECSCCSGGGEEEETT-TTEEEECCCTTCEECCT
T ss_pred HHHHHHHHHHHHHHHCCccccCCChhhEEEeCC-CCeEEeccchhhhhccc
Confidence 4444444 888999999999999999999854 35789999999987643
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.28 E-value=5.4e-12 Score=139.66 Aligned_cols=141 Identities=16% Similarity=0.108 Sum_probs=78.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+........ -.+..|.
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~~~ 70 (360)
T 3e3p_A 29 RMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR--------------------------------------NRELQIM 70 (360)
T ss_dssp ----------CEEEEETTTCCEEEEEEEECCTTCC--------------------------------------CHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEecCcccc--------------------------------------HHHHHHH
Confidence 68999999999999986 79999999865432100 0011233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCC-------ceEEEeecCCcCCCChHHH--hhcCCCHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSE-------TVLILEFMDGIRLNDCESL--EAFGVNKQKVVE 159 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~-------~vLvmE~i~G~~L~~~~~~--~~~~~~~~~l~~ 159 (864)
+.+..+.+. .-+.+-.++. ... .+|||||++|..+..+... .........+..
T Consensus 71 ~~l~~l~h~-----------------niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~ 133 (360)
T 3e3p_A 71 QDLAVLHHP-----------------NIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV 133 (360)
T ss_dssp HHHHHHCCT-----------------TBCCEEEEEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHH
T ss_pred HHHHhcCCC-----------------CcccHHHhhhccccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHH
Confidence 333333221 0122222222 111 5799999998533222211 122344444444
Q ss_pred HHHHHH--HHHHH--hcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 160 EITRAY--AHQIY--VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 160 ~~~~~~--l~~i~--~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+.+++ +..+| ..|++|+|+||+|||++.. ++.++|+|||++..+..
T Consensus 134 ~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~-~~~~kl~Dfg~a~~~~~ 184 (360)
T 3e3p_A 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEA-DGTLKLCDFGSAKKLSP 184 (360)
T ss_dssp HHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETT-TTEEEECCCTTCBCCCT
T ss_pred HHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCC-CCcEEEeeCCCceecCC
Confidence 444433 67788 9999999999999999852 48999999999987654
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=3.1e-12 Score=139.75 Aligned_cols=140 Identities=12% Similarity=0.142 Sum_probs=89.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+.........+ +..|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~------------------------------------~~~e~ 71 (327)
T 3aln_A 28 GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQ------------------------------------LLMDL 71 (327)
T ss_dssp CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHH------------------------------------HHHHH
T ss_pred heeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHH------------------------------------HHHHH
Confidence 67999999999999986 799999999876543211100 11122
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e-cCCceEEEeecCCcCCCChHHHh----hcCCCHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE----AFGVNKQKVVEEI 161 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLvmE~i~G~~L~~~~~~~----~~~~~~~~l~~~~ 161 (864)
..+ .... .++. |.+++ . ....+|||||++| +|.++.... ........+...+
T Consensus 72 ~~~---~~~~--------------~h~n--iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~ 131 (327)
T 3aln_A 72 DVV---MRSS--------------DCPY--IVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKIT 131 (327)
T ss_dssp HHH---HSSC--------------CCTT--BCCEEEEEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHH
T ss_pred HHH---HHcC--------------CCCc--EeeeeeEEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHH
Confidence 111 1111 1122 33333 2 4567899999997 555543321 2334555555544
Q ss_pred HHHH--HHHHHhc-CeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 162 TRAY--AHQIYVD-GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 162 ~~~~--l~~i~~~-G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
.+++ +..+|.. |++|+|+||.||+++.+ +.++|+|||++..+...
T Consensus 132 ~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~--~~~kl~Dfg~~~~~~~~ 179 (327)
T 3aln_A 132 LATVKALNHLKENLKIIHRDIKPSNILLDRS--GNIKLCDFGISGQLVDS 179 (327)
T ss_dssp HHHHHHHHHHHHHHSCCCSCCCGGGEEEETT--TEEEECCCSSSCC----
T ss_pred HHHHHHHHHHhccCCEeECCCCHHHEEEcCC--CCEEEccCCCceecccc
Confidence 4443 7788998 99999999999999865 89999999999877543
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=2.6e-12 Score=146.70 Aligned_cols=138 Identities=23% Similarity=0.198 Sum_probs=90.2
Q ss_pred ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 10 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
.+.||+|++|.||.+...+|+.||||+......+. +.+|.
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~----------------------------------------~~~E~ 59 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDI----------------------------------------ALMEI 59 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHH----------------------------------------HHHHH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHH----------------------------------------HHHHH
Confidence 47899999999987766689999999876543221 12344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCC---------CHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGV---------NKQK 156 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~---------~~~~ 156 (864)
+.+.++.+ ++. |.+++. ....+|||||++| +|.++........ ....
T Consensus 60 ~~l~~l~~-----------------Hpn--Iv~~~~~~~~~~~~~lv~E~~~g-sL~~~l~~~~~~~~~~~~~~~~~~~~ 119 (434)
T 2rio_A 60 KLLTESDD-----------------HPN--VIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPIS 119 (434)
T ss_dssp HHHHHHTT-----------------STT--BCCEEEEEECSSEEEEEECCCSE-EHHHHHHTC------------CCHHH
T ss_pred HHHHhccC-----------------CCC--cCeEEEEEecCCeEEEEEecCCC-CHHHHHhccCCCchhhhhccchhHHH
Confidence 44443311 112 233332 3456899999976 8877654211100 1122
Q ss_pred HHHHHHHHHHHHHHhcCeeccCCCCCCeEEccC-----------CCCceEEEecccccccChH
Q 002927 157 VVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKD-----------PPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 157 l~~~~~~~~l~~i~~~G~~H~D~hPgNIlv~~~-----------~~g~i~LiDFG~~~~l~~~ 208 (864)
++..++.. +..+|..|++|||+||+|||++.+ .+++++|+|||++..+...
T Consensus 120 i~~qi~~a-L~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~ 181 (434)
T 2rio_A 120 LLRQIASG-VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181 (434)
T ss_dssp HHHHHHHH-HHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC-
T ss_pred HHHHHHHH-HHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCC
Confidence 44444433 778999999999999999999753 2358999999999987654
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.7e-12 Score=147.97 Aligned_cols=137 Identities=18% Similarity=0.224 Sum_probs=86.9
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||.|++|+|+.....+|+.||||+..+..... +.+|.+
T Consensus 30 ~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~----------------------------------------~~~E~~ 69 (432)
T 3p23_A 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSF----------------------------------------ADREVQ 69 (432)
T ss_dssp EEEEECGGGCEEEEEESSSSEEEEEEECTTTEEE----------------------------------------CHHHHH
T ss_pred CeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHH----------------------------------------HHHHHH
Confidence 6899999999765555689999999876543211 123444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcC---CCHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFG---VNKQKVVEEITR 163 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~---~~~~~l~~~~~~ 163 (864)
.+.++. .+++ |.+++. ....+|||||++| +|.++....... .....++..++.
T Consensus 70 ~l~~l~-----------------~Hpn--Iv~l~~~~~~~~~~~lv~E~~~g-~L~~~l~~~~~~~~~~~~~~i~~qi~~ 129 (432)
T 3p23_A 70 LLRESD-----------------EHPN--VIRYFCTEKDRQFQYIAIELCAA-TLQEYVEQKDFAHLGLEPITLLQQTTS 129 (432)
T ss_dssp HHHHSC-----------------CCTT--BCCEEEEEEETTEEEEEEECCSE-EHHHHHHSSSCCCCSSCHHHHHHHHHH
T ss_pred HHHhcc-----------------CCCC--cCeEEEEEecCCEEEEEEECCCC-CHHHHHHhcCCCccchhHHHHHHHHHH
Confidence 333321 0111 223332 4456899999986 666654322211 133445554444
Q ss_pred HHHHHHHhcCeeccCCCCCCeEEccC---CCCceEEEecccccccChH
Q 002927 164 AYAHQIYVDGFFNGDPHPGNFLVSKD---PPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 164 ~~l~~i~~~G~~H~D~hPgNIlv~~~---~~g~i~LiDFG~~~~l~~~ 208 (864)
. +..+|..|++|||+||+|||++.+ +..+++|+|||+++.+...
T Consensus 130 a-L~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 130 G-LAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp H-HHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred H-HHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 3 778999999999999999999632 2246789999999887643
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.26 E-value=9.8e-12 Score=138.14 Aligned_cols=79 Identities=16% Similarity=0.124 Sum_probs=59.1
Q ss_pred CceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHHH--HHHHHhc-CeeccCCCCCCeEEccC----CCCceEEEec
Q 002927 128 ETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVD-GFFNGDPHPGNFLVSKD----PPHRPILLDF 199 (864)
Q Consensus 128 ~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~~--l~~i~~~-G~~H~D~hPgNIlv~~~----~~g~i~LiDF 199 (864)
..+++|||+ |.+|.++.... ..+.+...+...+.+++ +..+|.. |++|+|+||+|||++.+ ..+.++|+||
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Df 182 (373)
T 1q8y_A 104 HVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADL 182 (373)
T ss_dssp EEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCC
T ss_pred eEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEccc
Confidence 468999999 88888775432 23466666655555554 8889998 99999999999999642 1247999999
Q ss_pred ccccccCh
Q 002927 200 GLTKKLSS 207 (864)
Q Consensus 200 G~~~~l~~ 207 (864)
|++..+..
T Consensus 183 g~a~~~~~ 190 (373)
T 1q8y_A 183 GNACWYDE 190 (373)
T ss_dssp TTCEETTB
T ss_pred ccccccCC
Confidence 99987643
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=99.24 E-value=4.5e-12 Score=142.75 Aligned_cols=137 Identities=21% Similarity=0.205 Sum_probs=87.7
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|+..++..||||........ ..+|++
T Consensus 46 ~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-----------------------------------------~~~E~~ 84 (394)
T 4e7w_A 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-----------------------------------------KNRELQ 84 (394)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-----------------------------------------CCHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-----------------------------------------HHHHHH
Confidence 679999999999999876667999976432110 012444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCC------ceEEEeecCCcCCCChHHHh--hcCCCHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSE------TVLILEFMDGIRLNDCESLE--AFGVNKQKVVEEI 161 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~------~vLvmE~i~G~~L~~~~~~~--~~~~~~~~l~~~~ 161 (864)
.+.++++. .-+.+-.++. ... .+|||||++|..+....... ........+...+
T Consensus 85 il~~l~h~-----------------niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 147 (394)
T 4e7w_A 85 IMRIVKHP-----------------NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM 147 (394)
T ss_dssp HHHTCCCT-----------------TBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHH
T ss_pred HHHhCCCC-----------------CcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHH
Confidence 44433221 0122222222 111 56999999985443332211 2234555444444
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
.+++ +..+|..|++|||+||+|||++.+ ++.++|+|||+++.+.
T Consensus 148 ~qi~~aL~~LH~~~ivHrDlkp~Nill~~~-~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 148 YQLLRSLAYIHSIGICHRDIKPQNLLLDPP-SGVLKLIDFGSAKILI 193 (394)
T ss_dssp HHHHHHHHHHHHTTEECSCCSGGGEEEETT-TTEEEECCCTTCEECC
T ss_pred HHHHHHHHHHHHCCccCCCCCHHHEEEcCC-CCcEEEeeCCCccccc
Confidence 4443 888999999999999999999832 4899999999998764
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=5.9e-12 Score=133.04 Aligned_cols=136 Identities=16% Similarity=0.134 Sum_probs=93.2
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|+. +|+.||||+.+......- + .+ .|.+|++
T Consensus 16 ~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~--~---------------------------~~------~~~~E~~ 59 (271)
T 3kmu_A 16 TKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTR--K---------------------------SR------DFNEECP 59 (271)
T ss_dssp EEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHH--H---------------------------HH------HHHHHGG
T ss_pred HHhcCCCcceEEEEEE-CCeeEEEEEecccccCHH--H---------------------------HH------HHHHHHH
Confidence 7899999999999997 589999999875421110 0 00 1333443
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----c--CCceEEEeecCCcCCCChHHHhhc-CCCHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----S--SETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITR 163 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~--~~~vLvmE~i~G~~L~~~~~~~~~-~~~~~~l~~~~~~ 163 (864)
.+.+++ ++. |.+++. . ...++||||++|.+|.++...... .++...+...+.+
T Consensus 60 ~l~~l~------------------h~~--iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~q 119 (271)
T 3kmu_A 60 RLRIFS------------------HPN--VLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALD 119 (271)
T ss_dssp GGCCCS------------------CTT--EECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHH
T ss_pred HHHhcC------------------CCc--hhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHH
Confidence 333321 222 334432 2 456899999999999887643221 2566666666655
Q ss_pred HH--HHHHHhcC--eeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 164 AY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 164 ~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
++ +..+|..| ++|+|+||.||+++.+ +.++|.|||+...
T Consensus 120 i~~~l~~lH~~~~~i~H~dikp~Nil~~~~--~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 120 MARGMAFLHTLEPLIPRHALNSRSVMIDED--MTARISMADVKFS 162 (271)
T ss_dssp HHHHHHHHTTSSSCCTTCCCSGGGEEECTT--SCEEEEGGGSCCT
T ss_pred HHHHHHHHhcCCCceecCCCccceEEEcCC--cceeEEeccceee
Confidence 55 88899999 9999999999999865 7888888887554
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=4e-12 Score=150.98 Aligned_cols=149 Identities=17% Similarity=0.203 Sum_probs=96.9
Q ss_pred ccccc-ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhh
Q 002927 5 FMDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 82 (864)
Q Consensus 5 F~~fd-~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 82 (864)
+..|. .+.||+|++|.||+|+.+ +|+.||||+.++.......
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~------------------------------------ 56 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNR------------------------------------ 56 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHH------------------------------------
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHH------------------------------------
Confidence 34444 378999999999999975 7999999988765332110
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-------cCCceEEEeecCCcCCCChHHHhhc--CC
Q 002927 83 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAF--GV 152 (864)
Q Consensus 83 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-------~~~~vLvmE~i~G~~L~~~~~~~~~--~~ 152 (864)
-.+.+|++.+.++.+ +++ .+-.++. ....+|||||++|.+|.++...... ++
T Consensus 57 ~~~~~Ei~iL~~L~H------------------pnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~l 118 (676)
T 3qa8_A 57 ERWCLEIQIMKKLNH------------------PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGL 118 (676)
T ss_dssp HHHHHHHHHHHHCCB------------------TTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCC
T ss_pred HHHHHHHHHHHhCCC------------------CCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCC
Confidence 014456666665532 111 1111111 3456899999999999887542211 24
Q ss_pred CHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCC-CceEEEecccccccCh
Q 002927 153 NKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP-HRPILLDFGLTKKLSS 207 (864)
Q Consensus 153 ~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~-g~i~LiDFG~~~~l~~ 207 (864)
+...+...+.+++ +..+|..|++|+|+||+||+++.+++ ..++|+|||++..+..
T Consensus 119 se~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~ 176 (676)
T 3qa8_A 119 KEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ 176 (676)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTS
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccc
Confidence 4444444444433 88899999999999999999986521 2388999999987643
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.19 E-value=3.8e-11 Score=126.09 Aligned_cols=139 Identities=17% Similarity=0.145 Sum_probs=91.3
Q ss_pred cccccccccccc-cccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 3 GMFMDFVETPLA-TASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 3 ~~F~~fd~~pla-saSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
+.+..++-+|++ .|+.++||+....+|+.++||+.++...
T Consensus 17 ~~~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~~--------------------------------------- 57 (264)
T 1nd4_A 17 ERLFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGAL--------------------------------------- 57 (264)
T ss_dssp TTTTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTT---------------------------------------
T ss_pred HhcCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcccc---------------------------------------
Confidence 344555567786 6667999999877889999999765411
Q ss_pred hccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHH
Q 002927 82 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKV 157 (864)
Q Consensus 82 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l 157 (864)
-++..|++.++.+++. .+.+|+++. .+..+++|||++|.++. +.. .+...+
T Consensus 58 -~~~~~E~~~l~~l~~~------------------~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-~~~-----~~~~~~ 112 (264)
T 1nd4_A 58 -NELQDEAARLSWLATT------------------GVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-SSH-----LAPAEK 112 (264)
T ss_dssp -SCHHHHHHHHHHHHTT------------------TCCBCCEEEEEECSSCEEEEEECCSSEETT-TSC-----CCHHHH
T ss_pred -hhhhHHHHHHHHHHhC------------------CCCCCeEEEeccCCCCCEEEEEecCCcccC-cCc-----CCHhHH
Confidence 1255677777777541 466888875 33569999999999985 210 122223
Q ss_pred HHHHHHHHHHHHHh----------------------------------------------------------cCeeccCC
Q 002927 158 VEEITRAYAHQIYV----------------------------------------------------------DGFFNGDP 179 (864)
Q Consensus 158 ~~~~~~~~l~~i~~----------------------------------------------------------~G~~H~D~ 179 (864)
++.+.+. +.++|. .+++|+|+
T Consensus 113 ~~~l~~~-l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl 191 (264)
T 1nd4_A 113 VSIMADA-MRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDA 191 (264)
T ss_dssp HHHHHHH-HHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSC
T ss_pred HHHHHHH-HHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCC
Confidence 3222222 222222 24999999
Q ss_pred CCCCeEEccCCCCceEEEecccccccChH
Q 002927 180 HPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 180 hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
||+||+++.+ +.+.|||||.++.-++.
T Consensus 192 ~~~Nil~~~~--~~~~liD~~~a~~g~~~ 218 (264)
T 1nd4_A 192 CLPNIMVENG--RFSGFIDCGRLGVADRY 218 (264)
T ss_dssp CGGGEEEETT--EEEEECCCTTCEEEETH
T ss_pred CCCcEEEECC--cEEEEEcchhcccCChH
Confidence 9999999742 33459999998876553
|
| >2cc1_A Beta-lactamase, penicillinase; hydrolase, antibiotic resistance, broad-spectrum; 2.13A {Mycobacterium fortuitum} SCOP: e.3.1.1 | Back alignment and structure |
|---|
Probab=99.18 E-value=2.6e-10 Score=120.52 Aligned_cols=141 Identities=16% Similarity=0.233 Sum_probs=92.5
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchhhhcccCccCCCCccCHHhHhcCCCCCCCCCCCccCCCCcCCCCH
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDW 492 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~ 492 (864)
++++.|++||++|++|++++++++++|+|+||++|. +|.++++.| +|+.... +....+.
T Consensus 34 ~~~~~~~~aS~~K~~ta~~~l~~~~~G~l~ld~~v~-------------~~~~~~~~~-~~~~~~~-------~~~~~t~ 92 (262)
T 2cc1_A 34 RPDEMFAMCSTFKGYVAARVLQMAEHGEISLDNRVF-------------VDADALVPN-SPVTEAR-------AGAEMTL 92 (262)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHHTTSSCTTCEEE-------------CCGGGCCSS-CHHHHTT-------TTSEEEH
T ss_pred cCCCeeeehHHHHHHHHHHHHHHHHcCCCCCCceEE-------------cCHHHccCC-CcccccC-------CCCCcCH
Confidence 468899999999999999999999999999999987 455566665 3332211 0112456
Q ss_pred HHHHHHHHccCCCCCCCCceecc-cCcHHHHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceecc
Q 002927 493 DECLNRIALSAPETEPGQEQLYH-YLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTID 571 (864)
Q Consensus 493 ~~~~~~l~~~~~~~~pg~~~~Ys-n~~~~~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~ 571 (864)
.+++..+.. || |.+ ...++|+++|.. .+.+ .++++||++|.+....+. +
T Consensus 93 ~~ll~~~~~------------~S~N~a----~~~l~~~vgG~~---~~~~-~~~~lG~~~t~~~~~~~~----~------ 142 (262)
T 2cc1_A 93 AELCQAALQ------------RSDNTA----ANLLLKTIGGPA---AVTA-FARSVGDERTRLDRWEVE----L------ 142 (262)
T ss_dssp HHHHHHHHH------------SCCHHH----HHHHHHHHTHHH---HHHH-HHHHTTCCSCCCCSCTTG----G------
T ss_pred HHHHHHHHH------------hCCHHH----HHHHHHHhCChH---HHHH-HHHHcCCCceeecCcchh----h------
Confidence 676665442 23 333 356788887753 2333 467999998754210000 0
Q ss_pred CCcccccccCCCCCCCCCCCCCCcchhhhhhcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 572 TDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 572 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
. ....+..+.++|+.||++|+++++++..+++.
T Consensus 143 -------~------------------------------------~~~~g~~~~~~T~~dla~~~~~l~~~~~ls~~ 175 (262)
T 2cc1_A 143 -------N------------------------------------SAIPGDPRDTSTPAALAVGYRAILAGDALSPP 175 (262)
T ss_dssp -------G------------------------------------GCCTTCCTTEECHHHHHHHHHHHHHSSSSCHH
T ss_pred -------c------------------------------------ccCCCCccCccCHHHHHHHHHHHHcCCCCCHH
Confidence 0 00012345689999999999999998877655
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.4e-11 Score=139.54 Aligned_cols=76 Identities=8% Similarity=0.055 Sum_probs=51.2
Q ss_pred ceEEEeecCCcCCCChHHHhh------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecc
Q 002927 129 TVLILEFMDGIRLNDCESLEA------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFG 200 (864)
Q Consensus 129 ~vLvmE~i~G~~L~~~~~~~~------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG 200 (864)
.+++|++. +.+|.++..... ..+........+.+++ +..+|+.||+|||+||.|||++.+ +.++|+|||
T Consensus 180 ~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~--~~~kL~DFG 256 (413)
T 3dzo_A 180 RFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQR--GGVFLTGFE 256 (413)
T ss_dssp EEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT--CCEEECCGG
T ss_pred eEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecC--CeEEEEecc
Confidence 46777765 567776653110 0111122222223333 788999999999999999999965 889999999
Q ss_pred cccccCh
Q 002927 201 LTKKLSS 207 (864)
Q Consensus 201 ~~~~l~~ 207 (864)
+++....
T Consensus 257 ~a~~~~~ 263 (413)
T 3dzo_A 257 HLVRDGA 263 (413)
T ss_dssp GCEETTE
T ss_pred ceeecCC
Confidence 9887554
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.16 E-value=3.4e-12 Score=138.71 Aligned_cols=77 Identities=14% Similarity=0.190 Sum_probs=58.0
Q ss_pred cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccc
Q 002927 126 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 203 (864)
Q Consensus 126 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 203 (864)
....+++|||++|.+|.++.......++...+...+.+++ +..+|..|++|+|+||.||+++ + +.++|+|||++.
T Consensus 101 ~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~--~~~~l~Dfg~~~ 177 (319)
T 2y4i_B 101 PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-N--GKVVITDFGLFS 177 (319)
T ss_dssp SSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC-----CCEECCCSCCC
T ss_pred CCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-C--CCEEEeecCCcc
Confidence 4567899999999999887543332355555555555544 8889999999999999999997 3 789999999976
Q ss_pred cc
Q 002927 204 KL 205 (864)
Q Consensus 204 ~l 205 (864)
..
T Consensus 178 ~~ 179 (319)
T 2y4i_B 178 IS 179 (319)
T ss_dssp --
T ss_pred cc
Confidence 54
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=9.4e-10 Score=116.12 Aligned_cols=134 Identities=16% Similarity=0.197 Sum_probs=90.9
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
..++.+|.++||++.. +|+.++||+.+++... ..-++.+|++
T Consensus 20 ~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~-------------------------------------~~~~~~~E~~ 61 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKG-------------------------------------TTYDVEREKD 61 (263)
T ss_dssp ECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTT-------------------------------------STTCHHHHHH
T ss_pred eeccCCCCCeEEEEEC-CCCcEEEEeCCcccCC-------------------------------------CHHHHHHHHH
Confidence 3467788899999985 5789999998753210 0113667888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYA 166 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l 166 (864)
.++.+++ .+.||+++. .+..+++|||++|.++.+... ...+...++..+.+. +
T Consensus 62 ~l~~l~~-------------------~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~---~~~~~~~~~~~l~~~-l 118 (263)
T 3tm0_A 62 MMLWLEG-------------------KLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYE---DEQSPEKIIELYAEC-I 118 (263)
T ss_dssp HHHHHTT-------------------TSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCC---TTTCHHHHHHHHHHH-H
T ss_pred HHHHHhc-------------------CCCCCeEEEEEecCCceEEEEEecCCeehhhccC---CcccHHHHHHHHHHH-H
Confidence 7777643 256888875 345789999999998865310 112334455544443 4
Q ss_pred HHHHh-----------------------------------------------------------cCeeccCCCCCCeEEc
Q 002927 167 HQIYV-----------------------------------------------------------DGFFNGDPHPGNFLVS 187 (864)
Q Consensus 167 ~~i~~-----------------------------------------------------------~G~~H~D~hPgNIlv~ 187 (864)
..+|. .+++|+|+||+|||++
T Consensus 119 ~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~ 198 (263)
T 3tm0_A 119 RLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVK 198 (263)
T ss_dssp HHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEE
T ss_pred HHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEE
Confidence 44554 5699999999999997
Q ss_pred cCCCCceEEEecccccccCh
Q 002927 188 KDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 188 ~~~~g~i~LiDFG~~~~l~~ 207 (864)
++ +.+.||||+.++.-++
T Consensus 199 ~~--~~~~lIDwe~a~~gd~ 216 (263)
T 3tm0_A 199 DG--KVSGFIDLGRSGRADK 216 (263)
T ss_dssp TT--EEEEECCCTTCEEEEH
T ss_pred CC--cEEEEEEchhcccCCH
Confidence 42 3345999999876554
|
| >1bsg_A Beta lactamase, penicillinase; hydrolase, antibiotic resistance; 1.85A {Streptomyces albus} SCOP: e.3.1.1 | Back alignment and structure |
|---|
Probab=98.92 E-value=3.9e-08 Score=104.00 Aligned_cols=145 Identities=16% Similarity=0.104 Sum_probs=95.6
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchhhhcccCccCCCCccCHHhHhcC-CCCCCCCCCCccCCCCcCCCC
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNH-TSGLHNVSVDLSSENPLLICD 491 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~~ylP~~~~~~~~~ITir~LLtH-tSGl~~~~~~~~~~~~~~~~~ 491 (864)
++++.|++||++|++|++++++++++|+|+||++|. ++-.+++.| .||+...... +....+
T Consensus 34 ~~~~~~~~aS~~K~~~a~~~l~~~~~G~l~l~~~v~-------------~~~~~~~~~~~s~~~~~~~~-----~~~~~t 95 (266)
T 1bsg_A 34 RADELFPMCSVFKTLSSAAVLRDLDRNGEFLSRRIL-------------YTQDDVEQADGAPETGKPQN-----LANGMT 95 (266)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHTCSSSTTTTCEEC-------------CCHHHHHHHTCCTTTTSHHH-----HHHCEE
T ss_pred CCCCceecHHHHHHHHHHHHHHHHHcCCCCcCceEE-------------eCHHHccCCCCCchhhhccC-----CCCCcC
Confidence 567889999999999999999999999999999986 455666666 6666542100 011245
Q ss_pred HHHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceecc
Q 002927 492 WDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTID 571 (864)
Q Consensus 492 ~~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~ 571 (864)
..++++.+.. ||+ |. ....+++++.|. +-|.+ .+++|||++|.+.. +.. .
T Consensus 96 l~~ll~~~i~------------~S~-N~--aa~~L~~~vgG~---~~~~~-~~~~lG~~~t~~~~-~~~---~------- 145 (266)
T 1bsg_A 96 VEELCEVSIT------------ASD-NC--AANLMLRELGGP---AAVTR-FVRSLGDRVTRLDR-WEP---E------- 145 (266)
T ss_dssp HHHHHHHHHH------------SCC-HH--HHHHHHHHHTST---HHHHH-HHHHTTCSSCCCCS-CTT---G-------
T ss_pred HHHHHHHHHH------------hCc-HH--HHHHHHHHhcCH---HHHHH-HHHHcCCCceEecC-Cch---h-------
Confidence 6676666543 342 22 245678888874 23433 45789999975421 100 0
Q ss_pred CCcccccccCCCCCCCCCCCCCCcchhhhhhcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 572 TDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 572 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
.. ....+.++.++|+.||++|+++++++..+++.
T Consensus 146 ------~~------------------------------------~~~~~~~~~~~Ta~dla~~~~~l~~~~~l~~~ 179 (266)
T 1bsg_A 146 ------LN------------------------------------SAEPGRVTDTTSPRAITRTYGRLVLGDALNPR 179 (266)
T ss_dssp ------GG------------------------------------CCCTTCCTTEECHHHHHHHHHHHHTSSSSCHH
T ss_pred ------hc------------------------------------cccCCCCCCccCHHHHHHHHHHHHcCCCCCHH
Confidence 00 00113456789999999999999988766554
|
| >2j9o_A TLL2115 protein; penicillin-binding protein, hydrolase, lactamase, thioestera DD-peptidase; 1.50A {Synechococcus elongatus} PDB: 2jbf_A* 2j7v_A 2j8y_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=1.3e-08 Score=109.88 Aligned_cols=71 Identities=17% Similarity=0.298 Sum_probs=48.9
Q ss_pred hHHHHHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCC
Q 002927 363 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 442 (864)
Q Consensus 363 ~~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ 442 (864)
..+++.+++++++.. ..-.|+.+.-...|+++ ++ +.++.|+.||++|++|++++++++|+|+++
T Consensus 18 ~~l~~~l~~~~~~~~--~~~~~~~v~d~~tG~il---~~-----------~~~~~~~paS~~K~~ta~a~l~~~e~G~l~ 81 (298)
T 2j9o_A 18 TNLQQQIQQLVSRQP--NLTAGLYFFNLDSGASL---NV-----------GGDQVFPAASTIKFPILVAFFKAVDEGRVT 81 (298)
T ss_dssp HHHHHHHHHHHHTCT--TCEEEEEEEETTTCEEE---EE-----------BTTSCEECGGGGHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHhCC--CCeEEEEEEECCCCCEE---EE-----------CCCCeEecHhHHHHHHHHHHHHHHHcCCCC
Confidence 455566666655421 11123222223567765 22 457899999999999999999999999999
Q ss_pred ccCchhh
Q 002927 443 LEENIAN 449 (864)
Q Consensus 443 ld~~v~~ 449 (864)
+|++|..
T Consensus 82 l~~~v~~ 88 (298)
T 2j9o_A 82 LQERLTM 88 (298)
T ss_dssp SSCEEEC
T ss_pred ccceEEc
Confidence 9999874
|
| >1hzo_A Beta-lactamase; mixed alpha/beta, cephalosporinase, hydrolase; HET: MES; 1.75A {Proteus vulgaris} SCOP: e.3.1.1 | Back alignment and structure |
|---|
Probab=98.87 E-value=8.2e-08 Score=101.98 Aligned_cols=172 Identities=15% Similarity=0.101 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHhcccCccceeEEEEe--ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCC
Q 002927 364 DVEAKLRDFLVELGNDGKILGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKL 441 (864)
Q Consensus 364 ~l~~~l~~~l~~~~~~~~~~G~~v~v~--~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l 441 (864)
.+++.+++++++... - ++++|+ ..|+++ .+ +++..|++||++|++|++++++++++|++
T Consensus 5 ~l~~~l~~~~~~~~~---~--~~v~v~d~~tg~~~---~~-----------n~~~~~~~aS~~K~~ta~~~l~~v~~G~l 65 (271)
T 1hzo_A 5 TIEEQLNTLEKYSQG---R--LGVALINTEDNSQI---TY-----------RGEERFAMASTSKVMAVAAVLKASEKQAG 65 (271)
T ss_dssp HHHHHHHHHHHHHTS---E--EEEEEEETTTTEEE---EE-----------STTSCEECGGGGHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHhcCC---c--EEEEEEECCCCCEE---EE-----------CCCCcchhHHHHHHHHHHHHHHHHhCCCC
Confidence 455666666665321 1 223333 466654 22 56788999999999999999999999999
Q ss_pred CccCchhhhcccCccCCCCccCHHhHhcCCCCCCCCCCCccCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHH
Q 002927 442 KLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGW 521 (864)
Q Consensus 442 ~ld~~v~~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~ 521 (864)
+||++|.- +-++++. .||+..... ....+..+++..+.... +|..
T Consensus 66 ~ld~~v~~-------------~~~~~~~-~s~~~~~~~-------~~~~t~~~ll~~~i~~S-----------~N~a--- 110 (271)
T 1hzo_A 66 LLDKNITI-------------KKSDLVA-YSPITEKHL-------TTGMTLAELSAATLQYS-----------DNTA--- 110 (271)
T ss_dssp GGGCEECC-------------CGGGCCS-CCTTGGGCT-------TTCEEHHHHHHHHHHTC-----------CHHH---
T ss_pred CCCceEEe-------------CHHHccC-CChhhhhCC-------CCCcCHHHHHHHHHHcC-----------CHHH---
Confidence 99999862 1122222 234332111 11245667766654321 2333
Q ss_pred HHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhhhh
Q 002927 522 LCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQL 601 (864)
Q Consensus 522 lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 601 (864)
...+++++.|. +-|.+ .+++|||++|.+....+. .
T Consensus 111 -a~~L~~~~gG~---~~~~~-~~~~lG~~~t~~~~~~~~-----------------~----------------------- 145 (271)
T 1hzo_A 111 -MNKILDYLGGP---AKVTQ-FARSINDVTYRLDRKEPE-----------------L----------------------- 145 (271)
T ss_dssp -HHHHHHHHTSH---HHHHH-HHHHTTCSSCCCCCCTTG-----------------G-----------------------
T ss_pred -HHHHHHHhCCH---HHHHH-HHHHcCCCceeeCCCChh-----------------h-----------------------
Confidence 34578888872 23433 457899999754210000 0
Q ss_pred hcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 602 AAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
.....+....++|+.||+++++++++++.+++.
T Consensus 146 -------------~~~~~~~~~~~~T~~dla~~~~~l~~~~~l~~~ 178 (271)
T 1hzo_A 146 -------------NTAIHGDPRDTTSPIAMAKSLQALTLGDALGQS 178 (271)
T ss_dssp -------------GCCCTTCCTTEECHHHHHHHHHHHHTSSSSCHH
T ss_pred -------------ccCCCCCCCCccCHHHHHHHHHHHHcCCCCCHH
Confidence 000112345689999999999999998877655
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.81 E-value=5.7e-09 Score=115.61 Aligned_cols=140 Identities=15% Similarity=0.217 Sum_probs=87.4
Q ss_pred cccccccccceeeEEEEecCCCEEEEEEec--CChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 9 VETPLATASIAQVHRATLVDGRQVVVKVQH--QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 9 d~~plasaSigqV~~A~l~~G~~VAVKv~~--p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+-++++.|..+.||+.+.. +..++||+.. ++.... ..-++.
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~------------------------------------~~~~~~ 84 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLP------------------------------------SAHAIE 84 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------------------------------------------CHH
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCC------------------------------------cHHHHH
Confidence 4578999999999999864 5789999876 543110 112456
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--c-----CCceEEEeecCCcCCCChHHHhhcCCCH---HH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--S-----SETVLILEFMDGIRLNDCESLEAFGVNK---QK 156 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~-----~~~vLvmE~i~G~~L~~~~~~~~~~~~~---~~ 156 (864)
+|++.++.+++ ..+.||+++. . +..++||||++|..+.+... ...+. ..
T Consensus 85 ~E~~~l~~L~~------------------~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~~---~~l~~~~~~~ 143 (359)
T 3dxp_A 85 REYRVMDALAG------------------TDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQSL---PGMSPAERTA 143 (359)
T ss_dssp HHHHHHHHHTT------------------SSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCTTC---TTCCHHHHHH
T ss_pred HHHHHHHHhhc------------------CCCCCCcEEEECCCCCccCCeEEEEEecCCeecCCCcc---ccCCHHHHHH
Confidence 67777777643 2467898885 2 23789999999998864210 01111 22
Q ss_pred HHHHHHHHHHHHHHh----------------------------------------------------------cCeeccC
Q 002927 157 VVEEITRAYAHQIYV----------------------------------------------------------DGFFNGD 178 (864)
Q Consensus 157 l~~~~~~~~l~~i~~----------------------------------------------------------~G~~H~D 178 (864)
+.+.+.+. +..+|. .+++|+|
T Consensus 144 ~~~~l~~~-La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD 222 (359)
T 3dxp_A 144 IYDEMNRV-IAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGD 222 (359)
T ss_dssp HHHHHHHH-HHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSS
T ss_pred HHHHHHHH-HHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCC
Confidence 23333322 223332 5799999
Q ss_pred CCCCCeEEccCCCCceEEEecccccccCh
Q 002927 179 PHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 179 ~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+||+|||++.++...+.||||+++..-++
T Consensus 223 ~~~~Nil~~~~~~~v~~viDwe~a~~g~p 251 (359)
T 3dxp_A 223 YRLDNLMFHPTEPRVLAVLDWELSTLGHP 251 (359)
T ss_dssp CSGGGEEECSSSSCEEEECCCTTCEEECH
T ss_pred CCCCcEEEeCCCCcEEEEECccccccCCH
Confidence 99999999865212258999999876554
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=4.7e-08 Score=103.43 Aligned_cols=33 Identities=15% Similarity=0.094 Sum_probs=27.1
Q ss_pred CeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 173 GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 173 G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.++|+|+||+|||++.+ +.+.||||+.++.-++
T Consensus 194 ~l~HGDl~~~Nil~~~~--~~~~viDwe~a~~gdp 226 (272)
T 4gkh_A 194 VVTHGDFSLDNLIFDEG--KLIGCIDVGRVGIADR 226 (272)
T ss_dssp EEECSCCCTTSEEEETT--EEEEECCCTTCEEEET
T ss_pred EEEcCCCCCCeEEEECC--eEEEEEECcccccCCH
Confidence 48999999999999843 4567999999886554
|
| >2qpn_A Beta-lactamase GES-1; APO-enzyme, plasmid, hydrolase; 1.10A {Klebsiella pneumoniae} PDB: 3nia_A* 3ni9_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=8.3e-08 Score=102.91 Aligned_cols=67 Identities=16% Similarity=0.163 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHHHhcccCccceeEEEEe--ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCC
Q 002927 363 SDVEAKLRDFLVELGNDGKILGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGK 440 (864)
Q Consensus 363 ~~l~~~l~~~l~~~~~~~~~~G~~v~v~--~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~ 440 (864)
..+++.+++++++.. .-.| +.+. ..|+++ .+ ++++.|+.||++|++|++++++++++|+
T Consensus 22 ~~l~~~l~~~~~~~~---~~~~--v~v~d~~tg~~l---~~-----------~~~~~~~~aS~~K~~ta~~~l~~~~~G~ 82 (287)
T 2qpn_A 22 LTFKTDLEKLEREKA---AQIG--VAIVDPQGEIVA---GH-----------RMAQRFAMCSTFKFPLAALVFERIDSGT 82 (287)
T ss_dssp HHHHHHHHHHHHHHT---CEEE--EEEECTTCCEEE---EE-----------STTSCEECGGGGHHHHHHHHHHHHHHTS
T ss_pred hhHHHHHHHHHHhcC---CeEE--EEEEECCCCCEE---EE-----------CCCCceecHHHHHHHHHHHHHHHHHcCC
Confidence 455666666665432 1223 3333 466654 12 4578899999999999999999999999
Q ss_pred CCccCchh
Q 002927 441 LKLEENIA 448 (864)
Q Consensus 441 l~ld~~v~ 448 (864)
++||++|.
T Consensus 83 l~ld~~v~ 90 (287)
T 2qpn_A 83 ERGDRKLS 90 (287)
T ss_dssp SCTTCEEE
T ss_pred CCCCceEE
Confidence 99999986
|
| >2p74_A Beta-lactamase CTX-M-9A; ultra-high resolution, acylation, ESBL, hydrolase; HET: PO4; 0.88A {Escherichia coli} PDB: 3g2y_A* 4dds_A* 4ddy_A* 4de0_A* 4de1_A* 4de2_A* 4de3_A* 1ylj_A* 1yly_A* 1ym1_A* 1yms_A* 1ymx_A* 3g2z_A* 3g30_A* 3g31_A* 3g32_A* 3g34_A* 3g35_A* 1ylt_A* 1ylz_A* ... | Back alignment and structure |
|---|
Probab=98.72 E-value=2.4e-07 Score=97.75 Aligned_cols=142 Identities=15% Similarity=0.101 Sum_probs=87.1
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchhhhcccCccCCCCccCHHhHhcCCCCCCCCCCCccCCCCcCCCCH
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDW 492 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~ 492 (864)
++++.|+.||++|++|++++++++++|++++|++|.-. -.+++.| +++..... ....+.
T Consensus 36 ~~~~~~~~aS~~K~~ta~~~l~~~~~g~~~l~~~v~~~-------------~~~~~~~-~~~~~~~~-------~~~~tl 94 (263)
T 2p74_A 36 RGDERFPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIK-------------PADLVNY-NPIAEKHV-------NGTMTL 94 (263)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHTTCTTGGGCEEECC-------------GGGCCSC-CTTGGGGT-------TSEEEH
T ss_pred CCCCccccHHHHHHHHHHHHHHHHHcCCCCcCCeEEeC-------------HHHhccC-ChhhhhCC-------CCCccH
Confidence 45788999999999999999999999999999998631 1122222 22211110 112456
Q ss_pred HHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccC
Q 002927 493 DECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDT 572 (864)
Q Consensus 493 ~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~ 572 (864)
.++++.+.. +|+ |. ....+++++.|. +-|.+ .++++||++|.+.. +..
T Consensus 95 ~~ll~~~~~------------~S~-N~--a~~~L~~~~gG~---~~~~~-~~~~lG~~~t~~~~-~~~------------ 142 (263)
T 2p74_A 95 AELSAAALQ------------YSD-NT--AMNKLIAQLGGP---GGVTA-FARAIGDETFRLDR-TEP------------ 142 (263)
T ss_dssp HHHHHHHHH------------HCC-HH--HHHHHHHHTTSH---HHHHH-HHHHTTCSSCCCCC-CTT------------
T ss_pred HHHHHHHHH------------hCc-HH--HHHHHHHHhCCH---HHHHH-HHHHcCCCceeecC-Cch------------
Confidence 666655442 232 22 234566777662 22433 45789999874421 100
Q ss_pred CcccccccCCCCCCCCCCCCCCcchhhhhhcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 573 DDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 573 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
. .. ....+..+..+|+.||+++++++.++..+++.
T Consensus 143 -~---~~------------------------------------~~~~~~~~~~~T~~dla~~~~~l~~~~~l~~~ 177 (263)
T 2p74_A 143 -T---LN------------------------------------TAIPGDPRDTTTPRAMAQTLRQLTLGHALGET 177 (263)
T ss_dssp -G---GG------------------------------------CCCTTCCTTEECHHHHHHHHHHHHTSSSSCHH
T ss_pred -h---hc------------------------------------ccCCCCCcCccCHHHHHHHHHHHHcCCCCCHH
Confidence 0 00 00113346789999999999999998776654
|
| >1o7e_A L2 beta lactamase; hydrolase, class A; 1.51A {Stenotrophomonas maltophilia} SCOP: e.3.1.1 PDB: 1n4o_A | Back alignment and structure |
|---|
Probab=98.71 E-value=1e-07 Score=101.52 Aligned_cols=142 Identities=11% Similarity=0.080 Sum_probs=87.5
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchhhhcccCccCCCCccCHHhHhcCCCCCCCCCCCccCCCCcCCCCH
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDW 492 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~ 492 (864)
+++..|+.||++|++|++++++++++|+++||++|.-.- .++..+ +|+.... .....+.
T Consensus 47 n~~~~~~~aS~~K~~ta~~~l~~~~~G~l~l~~~v~~~~-------------~~~~~~-~~~~~~~-------~~~~~tl 105 (276)
T 1o7e_A 47 RQDERFPMCSTFKSMLAATVLSQAERMPALLDRRVPVGE-------------ADLLSH-APVTRRH-------AGKDMTV 105 (276)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHTTCTTTTTCEEEECG-------------GGCCSS-CTTGGGG-------TTEEEEH
T ss_pred CCCCccccHHHHHHHHHHHHHHHHHCCCCCCCceEEeCH-------------HHhcCC-CcccccC-------CCCCccH
Confidence 457889999999999999999999999999999986321 112222 2222111 0112456
Q ss_pred HHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccC
Q 002927 493 DECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDT 572 (864)
Q Consensus 493 ~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~ 572 (864)
.++++.+... -+|.. ...+++++.|. +-|. ..+++|||++|.+....+.
T Consensus 106 ~~ll~~~i~~-----------S~N~a----~~~L~~~lgG~---~~~~-~~~~~lG~~~t~~~~~~~~------------ 154 (276)
T 1o7e_A 106 RDLCRATIIT-----------SDNTA----ANLLFGVVGGP---PAVT-AFLRASGDTVSRSDRLEPE------------ 154 (276)
T ss_dssp HHHHHHHHHS-----------CCHHH----HHHHHHHHTHH---HHHH-HHHHHHTCSSCCCCCCTTG------------
T ss_pred HHHHHHHHHc-----------CCHHH----HHHHHHHhCCH---HHHH-HHHHHcCCCcccccCCchh------------
Confidence 6666655431 12333 34466777653 2233 3557899998744210000
Q ss_pred CcccccccCCCCCCCCCCCCCCcchhhhhhcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 573 DDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 573 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
.. ....+.++..+|+.||++++++++++..+++.
T Consensus 155 -----~~------------------------------------~~~~~~~~~~~T~~d~a~~~~~l~~~~~l~~~ 188 (276)
T 1o7e_A 155 -----LN------------------------------------SFAKGDPRDTTTPAAMAATLQRVVLGEVLQPA 188 (276)
T ss_dssp -----GG------------------------------------CCBTTBCTTEECHHHHHHHHHHHHTSSSSCHH
T ss_pred -----hc------------------------------------cccCCCCCCcCCHHHHHHHHHHHHhCCCCCHH
Confidence 00 00113457789999999999999998776654
|
| >1e25_A Extended-spectrum beta-lactamase PER-1; hydrolase, antibiotic resistance, class A cephalosporinase; 1.9A {Pseudomonas aeruginosa} SCOP: e.3.1.1 | Back alignment and structure |
|---|
Probab=98.70 E-value=2.2e-07 Score=99.17 Aligned_cols=37 Identities=35% Similarity=0.395 Sum_probs=34.5
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchhh
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIAN 449 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~~ 449 (864)
++++.|+.||++|++|++++++++++|+|+||++|.-
T Consensus 36 ~~~~~~~~aS~~K~~ta~~~l~~~~~G~l~ld~~v~~ 72 (282)
T 1e25_A 36 NPFEKFPMQSVFKLHLAMLVLHQVDQGKLDLNQTVIV 72 (282)
T ss_dssp STTCCEECGGGHHHHHHHHHHHHHHTTSSCTTCEEEE
T ss_pred CCCCceecHHHHHHHHHHHHHHHHHcCCCCCCCeEEe
Confidence 5678999999999999999999999999999999874
|
| >1g6a_A Beta-lactamase PSE-4; class A beta-lactamase, carbenicillinase, R234K mutant, hydrolase; 1.75A {Pseudomonas aeruginosa} SCOP: e.3.1.1 PDB: 1g68_A | Back alignment and structure |
|---|
Probab=98.69 E-value=4.4e-07 Score=96.16 Aligned_cols=68 Identities=22% Similarity=0.311 Sum_probs=48.9
Q ss_pred chHHHHHHHHHHHHhcccCccceeEEEEe--ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCC
Q 002927 362 HSDVEAKLRDFLVELGNDGKILGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNG 439 (864)
Q Consensus 362 ~~~l~~~l~~~l~~~~~~~~~~G~~v~v~--~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G 439 (864)
...+++.+++++++. ...+ ++.|+ ..|+++ .+ ++++.|+.||++|++|++++++++++|
T Consensus 5 ~~~l~~~l~~~~~~~----~~~~-~~~v~d~~tg~~~---~~-----------~~~~~~~~aS~~K~~~a~~~l~~~~~G 65 (271)
T 1g6a_A 5 FQQVEQDVKAIEVSL----SARI-GVSVLDTQNGEYW---DY-----------NGNQRFPLTSTFKTIACAKLLYDAEQG 65 (271)
T ss_dssp THHHHHHHHHHHHHT----TCEE-EEEEEETTTTEEE---EE-----------STTSCEECGGGGHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhc----CCeE-EEEEEECCCCCEE---EE-----------CCCCccccHHHHHHHHHHHHHHHHHCC
Confidence 345566666666543 2222 23333 467664 22 457889999999999999999999999
Q ss_pred CCCccCchh
Q 002927 440 KLKLEENIA 448 (864)
Q Consensus 440 ~l~ld~~v~ 448 (864)
+++||++|.
T Consensus 66 ~l~l~~~v~ 74 (271)
T 1g6a_A 66 KVNPNSTVE 74 (271)
T ss_dssp SCCTTCEEE
T ss_pred CCCccceEE
Confidence 999999986
|
| >1m40_A TEM-1, beta-lactamase TEM; acylation mechanism, ultra- high resolution, hydrolase; HET: CB4; 0.85A {Escherichia coli} SCOP: e.3.1.1 PDB: 1jwp_A* 1nxy_A* 1ny0_A* 1nym_A* 1nyy_A* 1pzo_A* 1erm_A* 1ero_A* 1erq_A* 1s0w_A 1xpb_A 1li0_A 1htz_A 1jtd_A 1esu_A 1jwz_A* 1li9_A 1jwv_A* 1jtg_A 1axb_A* ... | Back alignment and structure |
|---|
Probab=98.67 E-value=1.3e-06 Score=92.13 Aligned_cols=173 Identities=16% Similarity=0.152 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHhcccCccceeEEEEe--ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCC
Q 002927 364 DVEAKLRDFLVELGNDGKILGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKL 441 (864)
Q Consensus 364 ~l~~~l~~~l~~~~~~~~~~G~~v~v~--~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l 441 (864)
.+++.+++++++.- .-.| +.++ ..|++++. + ++++.|+.||++|++|++++++.+++|++
T Consensus 3 ~l~~~l~~~~~~~~---~~~~--~~v~d~~tG~~l~~--~-----------~~~~~~~~aS~~K~~ta~~~l~~~~~G~~ 64 (263)
T 1m40_A 3 ETLVKVKDAEDQLG---ARVG--YIELDLNSGKILES--F-----------RPEERFPMMSTFKVLLCGAVLSRVDAGQE 64 (263)
T ss_dssp HHHHHHHHHHHHHT---SEEE--EEEEETTTCCEEEE--E-----------STTSCEECGGGHHHHHHHHHHHHHHTTSC
T ss_pred hHHHHHHHHHHhcC---CeEE--EEEEECCCCCEeee--e-----------CCCCccccHHHHHHHHHHHHHHHHhCCCC
Confidence 45556666665432 1123 3333 57777752 1 45788999999999999999999999999
Q ss_pred CccCchhhhcccCccCCCCccCHHhHhcCCCCCCCCCCCccCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHH
Q 002927 442 KLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGW 521 (864)
Q Consensus 442 ~ld~~v~~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~ 521 (864)
++|++|.--- .++..+ +++.... .....+..++++.+.... +|..
T Consensus 65 ~l~~~v~~~~-------------~~~~~~-~~~~~~~-------~~~~~t~~~ll~~~~~~S-----------~N~a--- 109 (263)
T 1m40_A 65 QLGRRIHYSQ-------------NDLVEY-SPVTEKH-------LTDGMTVRELCSAAITMS-----------DNTA--- 109 (263)
T ss_dssp CTTCEECCCG-------------GGCCSC-CTTGGGC-------TTTCEEHHHHHHHHHHSC-----------CHHH---
T ss_pred CCCceEEeCH-------------HHhcCC-Ccchhhc-------CCCCccHHHHHHHHHHhC-----------cHHH---
Confidence 9999986211 111122 2222111 011245566666554321 2322
Q ss_pred HHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhhhh
Q 002927 522 LCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQL 601 (864)
Q Consensus 522 lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 601 (864)
...+++++.|. +-+.+ .++++||++|.+.. +...
T Consensus 110 -~~~L~~~~gG~---~~~~~-~~~~lG~~~t~~~~-~~~~---------------------------------------- 143 (263)
T 1m40_A 110 -ANLLLTTIGGP---KELTA-FLHNMGDHVTRLDR-WEPE---------------------------------------- 143 (263)
T ss_dssp -HHHHHHHHTSH---HHHHH-HHHHTTCSSCCCCC-CTTG----------------------------------------
T ss_pred -HHHHHHHhCCH---HHHHH-HHHHcCCCceecCC-Cchh----------------------------------------
Confidence 44567777763 22433 45789999874421 1100
Q ss_pred hcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 602 AAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
+.....+.++..+|+.||+++++++.+++.+++.
T Consensus 144 ------------~~~~~~g~~~~~~T~~d~a~~~~~l~~~~~l~~~ 177 (263)
T 1m40_A 144 ------------LNEAIPNDERDTTTPAAMATTLRKLLTGELLTLA 177 (263)
T ss_dssp ------------GGCCCTTCCTTEECHHHHHHHHHHHHHSTTSCHH
T ss_pred ------------hccccCCCCcCccCHHHHHHHHHHHHcCCCCCHH
Confidence 0000113457799999999999999999877654
|
| >1bue_A Protein (imipenem-hydrolysing beta-lactamase); hydrolase, antibiotic resistance, class A carbapenemase; 1.64A {Enterobacter cloacae} SCOP: e.3.1.1 PDB: 1bul_A* 1dy6_A | Back alignment and structure |
|---|
Probab=98.67 E-value=4.7e-07 Score=95.73 Aligned_cols=37 Identities=22% Similarity=0.321 Sum_probs=34.2
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchhh
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIAN 449 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~~ 449 (864)
++++.|++||++|++|++++++++++|+++||++|.-
T Consensus 35 ~~~~~~~~aS~~K~~~a~~~l~~~~~g~l~ld~~v~~ 71 (265)
T 1bue_A 35 RANERFPLCSSFKGFLAAAVLKGSQDNRLNLNQIVNY 71 (265)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHHTTSSCTTCEECC
T ss_pred CCCCccccHHHHHHHHHHHHHHHHhcCCCCcCceEEe
Confidence 4578899999999999999999999999999999873
|
| >3c5a_A Class A carbapenemase KPC-2; beta-lactamase, C-terminal deleted mutant, plasmid, hydrolase; HET: CIT; 1.23A {Escherichia coli} PDB: 3rxw_A* 3rxx_A* 2ods_A 2ov5_A* 3e2k_A 3e2l_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=2.5e-07 Score=97.70 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=33.7
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
++++.|+.||++|++|++++++++++|+++||++|.
T Consensus 35 ~~~~~~~~aS~~K~~~a~~~l~~~~~G~l~l~~~v~ 70 (264)
T 3c5a_A 35 RAEERFPLCSSFKGFLAAAVLARSQQQAGLLDTPIR 70 (264)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHHHSTTSTTCEEC
T ss_pred CCCCceecHHHHHHHHHHHHHHHHHCCCCCCCcEEE
Confidence 457889999999999999999999999999999986
|
| >1n9b_A Penicillinase, beta-lactamase SHV-2; beta-lactam hydrolase, detergent binding, drug design, radiation damage; HET: MA4 EPE; 0.90A {Klebsiella pneumoniae} SCOP: e.3.1.1 PDB: 3d4f_A* 2zd8_A* 1q2p_A* 1shv_A* 1vm1_A* 2g2u_A 2h5s_A* 1ong_A* 3c4o_A 3c4p_A 3mke_A* 3mkf_A* 3mxr_A* 3mxs_A* 3n4i_A 2a3u_A* 3opr_A* 3opl_A* 3oph_A* 3opp_A* ... | Back alignment and structure |
|---|
Probab=98.61 E-value=9.9e-07 Score=93.20 Aligned_cols=68 Identities=21% Similarity=0.209 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHhcccCccceeEEEEe--ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCC
Q 002927 364 DVEAKLRDFLVELGNDGKILGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKL 441 (864)
Q Consensus 364 ~l~~~l~~~l~~~~~~~~~~G~~v~v~--~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l 441 (864)
++++.+++++++.- ... ++.|+ ..|++++. + +++..|+.||++|++|++++++.+++|++
T Consensus 3 ~l~~~l~~~~~~~~----~~~-~v~v~d~~tg~~l~~--~-----------~~~~~~~~aS~~K~~~a~~~l~~~~~G~l 64 (265)
T 1n9b_A 3 QPLEQIKLSESQLS----GRV-GMIEMDLASGRTLTA--W-----------RADERFPMMSTFKVVLCGAVLARVDAGDE 64 (265)
T ss_dssp CHHHHHHHHHHHHT----SEE-EEEEEETTTCCEEEE--E-----------STTSCEECGGGHHHHHHHHHHHHHHTTSC
T ss_pred hHHHHHHHHHHhcC----CcE-EEEEEECCCCcEeee--e-----------CCCCeeecHHHHHHHHHHHHHHHHHCCCC
Confidence 35566666665532 222 23333 46777653 1 45788999999999999999999999999
Q ss_pred CccCchhh
Q 002927 442 KLEENIAN 449 (864)
Q Consensus 442 ~ld~~v~~ 449 (864)
++|++|.-
T Consensus 65 ~l~~~v~~ 72 (265)
T 1n9b_A 65 QLERKIHY 72 (265)
T ss_dssp CTTCEECC
T ss_pred CCCCeEEe
Confidence 99999863
|
| >2wk0_A Beta-lactamase; hydrolase, iodopenicillanate, antibiotic resistance; HET: BIY CIT; 1.65A {Bacillus licheniformis} PDB: 2x71_A* 3b3x_A* 1i2s_A* 1i2w_A* 2y91_A* 2blm_A 4blm_A 3sh9_A* 3sh7_A* 3sh8_A* 3ly3_A 3kgo_A* 3ly4_A* 3kgm_A* 3kgn_A* 3m2j_A* 3m2k_A* 3soi_A* 1mbl_A | Back alignment and structure |
|---|
Probab=98.53 E-value=6.5e-07 Score=94.64 Aligned_cols=140 Identities=19% Similarity=0.178 Sum_probs=87.2
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchhhhcccCccCCCCccCHHhHhcCCCCCCCCCCCccCCCCcCCCCH
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDW 492 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~ 492 (864)
+++..|+.||++|++|++++++++++| +||++|. ++.++++.| +|+..... ....+.
T Consensus 35 ~~~~~~~~aS~~K~~~a~~~l~~~~~g--~l~~~v~-------------~~~~~~~~~-~~~~~~~~-------~~~~t~ 91 (265)
T 2wk0_A 35 RPDERFAFASTIKALTVGVLLQQKSIE--DLNQRIT-------------YTRDDLVNY-NPITEKHV-------DTGMTL 91 (265)
T ss_dssp STTCEEECGGGHHHHHHHHHHHHCCTG--GGGCEEC-------------CCTTTCCSC-CTTGGGCT-------TTCEEH
T ss_pred CCCCceecHHHHHHHHHHHHHHHHhCC--CCCCeEE-------------eCHHHccCC-CcccccCC-------CCCccH
Confidence 567899999999999999999999999 8988875 222333344 34332111 122456
Q ss_pred HHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccC
Q 002927 493 DECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDT 572 (864)
Q Consensus 493 ~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~ 572 (864)
.++++.+.. ||+ |. ....+++++.| .+-|.+ .+++|||++|.+......
T Consensus 92 ~~ll~~~i~------------~S~-N~--aa~~L~~~lgG---~~~~~~-~~~~lG~~~t~~~~~~~~------------ 140 (265)
T 2wk0_A 92 KELADASLR------------YSD-NT--AQNLILKQIGG---PESLKK-ELRKIGDEVTNPERFEPE------------ 140 (265)
T ss_dssp HHHHHHHHH------------HCC-HH--HHHHHHHHTTH---HHHHHH-HHHHTTCCSCCCCCCTTG------------
T ss_pred HHHHHHHHH------------hCC-HH--HHHHHHHHhCC---HHHHHH-HHHHcCCCceeecCcchh------------
Confidence 676666543 332 22 24467777765 234443 467899998754210000
Q ss_pred CcccccccCCCCCCCCCCCCCCcchhhhhhcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 573 DDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 573 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
.. ....+..+..+|+.||++++++++++..+++.
T Consensus 141 -----~~------------------------------------~~~~~~~~~~~T~~dla~~~~~l~~~~~ls~~ 174 (265)
T 2wk0_A 141 -----LN------------------------------------EVNPGETQDTSTARALATSLQAFALEDKLPSE 174 (265)
T ss_dssp -----GG------------------------------------CCCTTCCTTEEEHHHHHHHHHHHHTSTTSCHH
T ss_pred -----hc------------------------------------cccCCCCCCcCCHHHHHHHHHHHHcCCCCCHH
Confidence 00 00012235689999999999999998776654
|
| >1tvf_A PBP4, penicillin binding protein 4; structural genomics, nysgxrc target, SAV0642, PSI, protein structure initiative; 2.00A {Staphylococcus aureus} SCOP: b.105.1.2 e.3.1.1 | Back alignment and structure |
|---|
Probab=98.46 E-value=8.5e-07 Score=97.91 Aligned_cols=119 Identities=14% Similarity=0.200 Sum_probs=75.9
Q ss_pred ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchhhhcccCccCCCCccCHHhHhcC
Q 002927 391 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNH 470 (864)
Q Consensus 391 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~~ylP~~~~~~~~~ITir~LLtH 470 (864)
..|++++++ +.|..|++||+||++|++++++.+++|+|+||++|.- +=.+ .+
T Consensus 43 ~tG~vL~~~-------------n~d~~~~~AS~tKlmTa~~vl~~i~~G~l~Ld~~V~v-------------s~~~--~~ 94 (369)
T 1tvf_A 43 QTGQLLYQY-------------NIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTM-------------TNKE--YI 94 (369)
T ss_dssp TTSBEEEEE-------------STTCCBCCGGGHHHHHHHHHHHHHHTTSSCTTCEEEC-------------CHHH--HH
T ss_pred CCCCEEEEE-------------CCCCeEccHHHHHHHHHHHHHHHHhcCCCCCCCeEEE-------------CHHH--Hh
Confidence 678887753 5688999999999999999999999999999998751 1111 11
Q ss_pred CCCCCCCCCCccCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHHHHhC--CCHHHHHHHHhhhccC
Q 002927 471 TSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASG--KKFQEILEEGIIQPLS 548 (864)
Q Consensus 471 tSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~lLg~iie~vtG--~~~~~~~~~~if~PLg 548 (864)
.+|.+..... ...+....+.++++..+.-.. .|.. .-.++|.+.| ..|-+.|.++ +++||
T Consensus 95 ~~g~~~~S~~--~l~~g~~~tv~dLl~~~ii~S-----------~NdA----a~aLae~vgGs~~~Fv~~MN~~-a~~LG 156 (369)
T 1tvf_A 95 MSTLPELSNT--KLYPGQVWTIADLLQITVSNS-----------SNAA----ALILAKKVSKNTSDFVDLMNNK-AKAIG 156 (369)
T ss_dssp HTTCTTSCCC--CCCTTCEEEHHHHHHHHHHSC-----------CHHH----HHHHHHHHSSSHHHHHHHHHHH-HHHTT
T ss_pred hcCCCCccee--eccCCCeEeHHHHHHHHHhhC-----------cHHH----HHHHHHHhCCCHHHHHHHHHHH-HHHhC
Confidence 2232211100 011112345666666654211 1222 3345677777 3577888886 89999
Q ss_pred CCCccCC
Q 002927 549 IDGELYI 555 (864)
Q Consensus 549 m~~t~~~ 555 (864)
|++|.|.
T Consensus 157 m~~T~f~ 163 (369)
T 1tvf_A 157 MKNTHFV 163 (369)
T ss_dssp CTTCBCS
T ss_pred Ccccccc
Confidence 9999763
|
| >3a3j_A PBP5; penicillin binding protein 5, DACA, hydrolase; 2.15A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=98.45 E-value=5.2e-07 Score=98.83 Aligned_cols=117 Identities=15% Similarity=0.125 Sum_probs=74.2
Q ss_pred ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchhhhcccCccCCCCccCHHhHhcC
Q 002927 391 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNH 470 (864)
Q Consensus 391 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~~ylP~~~~~~~~~ITir~LLtH 470 (864)
..|++++++ +.|..|++||+||++|++++++.+++|+|+||++|.-- + .. ... .
T Consensus 18 ~tG~vl~~~-------------n~d~~~~~AS~tKlmTa~~vl~~i~~G~l~ld~~v~vs--~---~a---~~~----~- 71 (344)
T 3a3j_A 18 NSGAILTAL-------------NPDQRQYPASLTKMMTSYVVGVALKQGKIHNTDMVTIG--E---SA---WGR----N- 71 (344)
T ss_dssp TTCCEEEEE-------------STTSCBCCGGGHHHHHHHHHHHHHHTTSSCTTCEEECC--T---TT---CGG----G-
T ss_pred CCCcEEEEE-------------CCCCeEccHHHHHHHHHHHHHHHHHcCCCCCCCEEEEC--H---HH---Hhc----c-
Confidence 578888753 56888999999999999999999999999999988621 1 00 010 0
Q ss_pred CCCCCCCCCCccCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHHHHhC--CCHHHHHHHHhhhccC
Q 002927 471 TSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASG--KKFQEILEEGIIQPLS 548 (864)
Q Consensus 471 tSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~lLg~iie~vtG--~~~~~~~~~~if~PLg 548 (864)
.+|-... ...+....+.++++..+.- +|. |- ..-.++|.+.| ..|-+.|.++ .+.||
T Consensus 72 ~~~~s~~-----~l~~g~~~tv~dLl~~~l~------------~S~-Nd--Aa~aLae~vgGs~~~Fv~~Mn~~-a~~LG 130 (344)
T 3a3j_A 72 FPDSSKM-----FLDLNTQVSVADLNRGVIV------------VSG-ND--ATVALAEHISGNVPNFVETMNKY-VQQFG 130 (344)
T ss_dssp CTTSCCC-----CCCTTCEEEHHHHHHHHHH------------HCC-HH--HHHHHHHHHHSSHHHHHHHHHHH-HHHTT
T ss_pred cCCCcee-----cccCCCEEEHHHHHHHHHH------------hch-HH--HHHHHHHHhcCCHHHHHHHHHHH-HHHcC
Confidence 0110000 0111123456666666542 232 11 12235667777 4588889887 68999
Q ss_pred CCCccC
Q 002927 549 IDGELY 554 (864)
Q Consensus 549 m~~t~~ 554 (864)
|++|.|
T Consensus 131 ~~~T~f 136 (344)
T 3a3j_A 131 LKNTNF 136 (344)
T ss_dssp CSSCBC
T ss_pred CCceEE
Confidence 999866
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.42 E-value=2.5e-07 Score=99.88 Aligned_cols=36 Identities=14% Similarity=0.166 Sum_probs=28.5
Q ss_pred cCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 172 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 172 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..++|+|+||+||+++++.++.+.||||+.+..-++
T Consensus 191 ~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~ 226 (304)
T 3sg8_A 191 PCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDP 226 (304)
T ss_dssp CEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECT
T ss_pred ceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCCh
Confidence 468999999999999863224577999999876554
|
| >1w7f_A Beta-lactamase; hydrolase, isocitrate, bacillus licheniformis hydrolase; HET: ICT; 1.80A {Bacillus licheniformis} | Back alignment and structure |
|---|
Probab=98.41 E-value=4.1e-06 Score=90.61 Aligned_cols=100 Identities=17% Similarity=0.141 Sum_probs=62.6
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchhhhcccCccCCCCccCHHhHhcCCCCCCCCCCCccCCCCcCCCCH
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDW 492 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~ 492 (864)
+++..|+.||++|++|++++++.+++| +||++|.- +-.++..| +|+.... +....+.
T Consensus 77 n~~~~~~~aS~~K~~ta~~~l~~~~~G--~ld~~v~~-------------~~~~~~~~-s~~~~~~-------~~~~~tl 133 (307)
T 1w7f_A 77 RPDERFAFASTIKALTVGVLLQQKSIE--DLNQRITY-------------TRDDLVNY-NPITEKH-------VDTGMTL 133 (307)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHCCTG--GGGCEECC-------------CTTTCCSC-CTTGGGC-------TTTCEEH
T ss_pred CCCCccccHHHHHHHHHHHHHHHhcCC--CCCceEEc-------------CHHHccCC-CcccccC-------CCCCcCH
Confidence 457889999999999999999999999 89888761 11222233 2332111 1112456
Q ss_pred HHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccC
Q 002927 493 DECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELY 554 (864)
Q Consensus 493 ~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~ 554 (864)
.++++.+.. +|+ |. ....+++++.|. +-|.+ .+++|||++|.+
T Consensus 134 ~~ll~~~i~------------~S~-N~--aa~~L~~~lgG~---~~~~~-~~~~lG~~~t~~ 176 (307)
T 1w7f_A 134 KELADASLR------------YSD-NT--AQNLILKQIGGP---ESLKK-ELRKIGDEVTNP 176 (307)
T ss_dssp HHHHHHHHH------------HCC-HH--HHHHHHHHTTHH---HHHHH-HHHHTTCCSCCC
T ss_pred HHHHHHHHH------------cCC-HH--HHHHHHHHhcCH---HHHHH-HHHHcCCCceee
Confidence 666655442 332 22 355677777652 44543 567899998744
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=4.6e-07 Score=101.66 Aligned_cols=34 Identities=9% Similarity=0.073 Sum_probs=26.2
Q ss_pred ccccccccccceeeEEEEec-CCCEEEEEEecCCh
Q 002927 8 FVETPLATASIAQVHRATLV-DGRQVVVKVQHQGI 41 (864)
Q Consensus 8 fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i 41 (864)
++.++++.|..++||+++.. +|+.|+||...|..
T Consensus 33 ~~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~ 67 (397)
T 2olc_A 33 LTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYA 67 (397)
T ss_dssp CEEEECCSSSSEEEEEEEC----CEEEEEEECCC-
T ss_pred eEEEECCCCceEEEEEEEECCCCcEEEEEecchhh
Confidence 44579999999999999865 57899999988754
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=98.39 E-value=5.4e-07 Score=96.44 Aligned_cols=79 Identities=18% Similarity=0.215 Sum_probs=59.8
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
++++.|..++||+.++.||+.|+||+..++.... .-.|..|++
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~-------------------------------------~~~~~~Ea~ 63 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPAL-------------------------------------DGLFRAEAL 63 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCC-------------------------------------TTHHHHHHH
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcch-------------------------------------hhHHHHHHH
Confidence 6899999999999999999999999865432110 001556888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCC
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLND 143 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~ 143 (864)
.++.+++ ...+.||+++.....+++|||+++.....
T Consensus 64 ~L~~L~~-----------------~~~vpvP~v~~~~~~~lv~e~l~~~~~~~ 99 (288)
T 3f7w_A 64 GLDWLGR-----------------SFGSPVPQVAGWDDRTLAMEWVDERPPTP 99 (288)
T ss_dssp HHHHHTC-----------------STTCCSCCEEEEETTEEEEECCCCCCCCH
T ss_pred HHHHHHh-----------------hCCCCcceEEeccCceEEEEeecccCCCh
Confidence 8777643 22578999998777899999999987664
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=4e-07 Score=98.52 Aligned_cols=37 Identities=22% Similarity=0.365 Sum_probs=28.6
Q ss_pred cCeeccCCCCCCeEEccC-CCCce-EEEecccccccChH
Q 002927 172 DGFFNGDPHPGNFLVSKD-PPHRP-ILLDFGLTKKLSSS 208 (864)
Q Consensus 172 ~G~~H~D~hPgNIlv~~~-~~g~i-~LiDFG~~~~l~~~ 208 (864)
..++|+|+||+||+++.+ .++++ .||||+.+..-++.
T Consensus 190 ~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd~~ 228 (306)
T 3tdw_A 190 PRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPD 228 (306)
T ss_dssp CEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEECGG
T ss_pred CeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCCHH
Confidence 478999999999999851 12565 79999988766553
|
| >3dw0_A Class A carbapenemase KPC-2; beta-lactamase, antibiotic resistance, hydrolase; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.33 E-value=1.7e-05 Score=85.01 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=33.6
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
+.|..|+.+|++|++++++++..+++|+++||++|.
T Consensus 60 n~d~~~~~AS~~Kl~~a~~~l~~v~~G~l~ld~~v~ 95 (294)
T 3dw0_A 60 RAEERFPLCSSFKGFLAAAVLARSQQQAGLLDTPIR 95 (294)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHTTSTTCTTCEEC
T ss_pred CCCCcccchHHHHHHHHHHHHHHHhcCCCCCcceEe
Confidence 567889999999999999999999999999999884
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=98.29 E-value=1.7e-06 Score=93.84 Aligned_cols=76 Identities=16% Similarity=0.307 Sum_probs=57.4
Q ss_pred ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 10 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
-+||+.|.+.++|+.+. +++.++||+..++-.. .|..|+
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~~~~----------------------------------------~~~~E~ 79 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERSYRS----------------------------------------MFRAEA 79 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGGGHH----------------------------------------HHHHHH
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcccHH----------------------------------------HHHHHH
Confidence 47899999999999986 6789999987754211 144577
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCC
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLND 143 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~ 143 (864)
+.++.++.. ..+.||+++. .+..+++|||++|.++..
T Consensus 80 ~~L~~L~~~-----------------~~v~VP~vl~~~~~~g~~~lvme~l~G~~~~~ 120 (312)
T 3jr1_A 80 DQLALLAKT-----------------NSINVPLVYGIGNSQGHSFLLLEALNKSKNKQ 120 (312)
T ss_dssp HHHHHHHHT-----------------TSSBCCCEEEEEECSSEEEEEEECCCCCCCCT
T ss_pred HHHHHHHhh-----------------CCCCcceEEEEeecCCceEEEEEeccCCCCCc
Confidence 777777652 1477899985 346899999999998753
|
| >4euz_A Carbapenem-hydrolizing beta-lactamase SFC-1; carbapenemase, hydrolase, antibiotic resistance, beta-lactam complex; HET: HAR MEM; 1.08A {Serratia fonticola} PDB: 4eqi_A 4ev4_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=3.7e-05 Score=81.92 Aligned_cols=36 Identities=19% Similarity=0.245 Sum_probs=33.5
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
+.|..|+.+|++|++++++++..+++|+++||++|.
T Consensus 39 n~d~~~~~AS~~Kl~~~~~vl~~v~~G~l~ld~~v~ 74 (283)
T 4euz_A 39 RANERFPLCASFKGFLAAAVLSKSQQQEGLLNQRIR 74 (283)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHHHSTTGGGCEEC
T ss_pred CCCCeEEcHHHHHHHHHHHHHHHhhCCCCCCCcEEE
Confidence 568889999999999999999999999999999874
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=3.7e-06 Score=92.60 Aligned_cols=82 Identities=16% Similarity=0.221 Sum_probs=56.5
Q ss_pred ccc-ccccceeeEEEEec-------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhh
Q 002927 11 TPL-ATASIAQVHRATLV-------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 82 (864)
Q Consensus 11 ~pl-asaSigqV~~A~l~-------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 82 (864)
++| +.|....+|+.+.. +|+.+++|+..++.... ....
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~----------------------------------~~~~ 71 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVP----------------------------------VFPT 71 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCC----------------------------------SSSC
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccc----------------------------------cCch
Confidence 677 88999999998864 27789999876532100 0011
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-c------CCceEEEeecCCcCCCC
Q 002927 83 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S------SETVLILEFMDGIRLND 143 (864)
Q Consensus 83 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~------~~~vLvmE~i~G~~L~~ 143 (864)
.++.+|++.++.++... .+.||+++. + +..+++|||++|.++.+
T Consensus 72 ~~~~~E~~~l~~L~~~~-----------------~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 72 YRLDHQFEVIRLVGELT-----------------DVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp CCHHHHHHHHHHHHHHC-----------------CSCCCCEEEEECSSTTTSSCEEEEECCCCBCCCB
T ss_pred hHHHHHHHHHHHHhhcC-----------------CCCCCcEEEEccCCCccCCceEEEEecCCCChhh
Confidence 24667888888877631 367898885 2 23579999999998764
|
| >4ewf_A Beta-lactamase; ABA-sandwich, structural genomics, midwest center for struct genomics (MCSG), PSI-biology, cytoplasmic, hydrolase; 2.00A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=98.21 E-value=4.3e-05 Score=81.16 Aligned_cols=36 Identities=25% Similarity=0.161 Sum_probs=33.6
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
+.|..|+.+|++|++++++++..+++|+++||++|.
T Consensus 43 n~d~~~~~AS~~Kl~~~~~~l~~v~~G~l~l~~~v~ 78 (275)
T 4ewf_A 43 NGDRRFRAASTVKIPLMIAVYRAVDAGERALTDRIV 78 (275)
T ss_dssp STTCCEECGGGGHHHHHHHHHHHHHTTSCCTTCEEE
T ss_pred CCCCeEccHHHHHHHHHHHHHHHHhcCCCCchhhcc
Confidence 557889999999999999999999999999999885
|
| >3p09_A Beta-lactamase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich, cytosol; HET: MSE; 1.90A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.19 E-value=9.5e-05 Score=79.06 Aligned_cols=36 Identities=22% Similarity=0.195 Sum_probs=33.7
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
+.|..|+.+|++|++++++++..+++|+++||++|.
T Consensus 55 n~d~~~~~AS~~Kl~~~~~vl~~v~~G~l~ld~~v~ 90 (290)
T 3p09_A 55 NESYHFPICSVFKFLLVGAILDYDMHNQGFLDKKIP 90 (290)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHHHSTTGGGCEEE
T ss_pred CCCCeEecHHHHHHHHHHHHHHHhhcCCCCCcceEE
Confidence 568889999999999999999999999999999875
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.17 E-value=6.2e-06 Score=89.85 Aligned_cols=35 Identities=14% Similarity=0.163 Sum_probs=29.2
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+++|+|+||+|||++.+ +.++||||+.++.-++
T Consensus 221 ~~~l~HgD~~~~Nil~~~~--~~~~lIDfe~a~~g~~ 255 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGEN--EQIWVIDLDTVSFDLP 255 (346)
T ss_dssp SCCEECSSCSTTSEEECGG--GCEEECCCTTCEECCT
T ss_pred cCceecCCCCcccEEEeCC--CcEEEEehhhcccCCh
Confidence 4689999999999999754 6899999998875443
|
| >1ghp_A Beta-lactamase, penicillinase; hydrolase, antibiotic resistance, beta-lactam hydrolysis, benzylpenicillin, cephaloridine; HET: PNM; 1.76A {Staphylococcus aureus} SCOP: e.3.1.1 PDB: 1ghi_A* 1ghm_A* 1kgf_A 1kge_A 1ome_A 1kgg_A 1dja_A 3blm_A 1blh_A* 1blc_A 1djc_A 1djb_A 1blp_A 1pio_A | Back alignment and structure |
|---|
Probab=98.15 E-value=2.8e-05 Score=81.60 Aligned_cols=140 Identities=14% Similarity=0.100 Sum_probs=86.7
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchhhhcccCccCCCCccCHHhHhcCCCCCCCCCCCccCCCCcCCCCH
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDW 492 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~ 492 (864)
+++..|+.||++|++|++++++.+++|+ ||++|.- +-.+++.+ +|+..... ....+.
T Consensus 31 ~~~~~~~~aS~~K~~~a~~~l~~~~~g~--ld~~v~~-------------~~~~~~~~-s~i~~~~~-------~~~~tl 87 (258)
T 1ghp_A 31 NSDKRFAYASTSKAINSAILLEQVPYNK--LNKKVHI-------------NKDDIVAY-SPILEKYV-------GKDITL 87 (258)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHSCGGG--GGCEEEE-------------CGGGCCSS-CTTGGGGT-------TEEEEH
T ss_pred CCCCcccchHHHHHHHHHHHHHHhccCC--CCCcEEe-------------CHHHccCC-CcchhhcC-------CCCcCH
Confidence 4578899999999999999999999998 8887651 22222222 23322110 112456
Q ss_pred HHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccC
Q 002927 493 DECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDT 572 (864)
Q Consensus 493 ~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~ 572 (864)
.++++.+.. +|+ |. ....+++++.|. +-|.+ .+++|||++|.+....+. +.
T Consensus 88 ~~l~~~~i~------------~S~-N~--aa~~L~~~~gG~---~~~~~-~~~~lG~~~t~~~~~~~~----~~------ 138 (258)
T 1ghp_A 88 KALIEASMT------------YSD-NT--ANNKIIKEIGGI---KKVKQ-RLKELGDKVTNPVRYDIE----LQ------ 138 (258)
T ss_dssp HHHHHHHHH------------HCC-HH--HHHHHHHHHTCH---HHHHH-HHHHTTCCSCBCCSCTTG----GG------
T ss_pred HHHHHHHHH------------hcc-HH--HHHHHHHHhCCH---HHHHH-HHHHcCCCceecCCCChh----hc------
Confidence 666655443 332 22 245577777673 34544 578899999754211000 00
Q ss_pred CcccccccCCCCCCCCCCCCCCcchhhhhhcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 573 DDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 573 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
....+.++..+|+.||+++++.++++..+++.
T Consensus 139 -------------------------------------------~~~~~~~~~~~T~~d~a~~~~~l~~~~~ls~~ 170 (258)
T 1ghp_A 139 -------------------------------------------YYSPKSKKDTSTPAAFGKTLNKLIANGKLSKE 170 (258)
T ss_dssp -------------------------------------------CCCTTCCTTEECHHHHHHHHHHHTTSSSSCHH
T ss_pred -------------------------------------------ccCCCCCCCccCHHHHHHHHHHHHcCCCCCHH
Confidence 00013456789999999999999998877655
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=98.08 E-value=9.7e-06 Score=87.17 Aligned_cols=72 Identities=17% Similarity=0.280 Sum_probs=51.9
Q ss_pred ccccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 10 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
-+||+.|...++|+. +.++||+..++... -+|..+|+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~--------------------------------------~~~r~~E~ 59 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE--------------------------------------YINRANEA 59 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC------------------------------------------CCCHHHHH
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc--------------------------------------eeCHHHHH
Confidence 478999999999998 67999998765321 13445688
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe--cCCceEEEeec-CCcCCCC
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFM-DGIRLND 143 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLvmE~i-~G~~L~~ 143 (864)
+.++.++.. .+. |+++. ....+++|||+ +|.++..
T Consensus 60 ~~l~~l~~~------------------g~~-P~~~~~~~~~~~~v~e~i~~g~~l~~ 97 (301)
T 3dxq_A 60 VAAREAAKA------------------GVS-PEVLHVDPATGVMVTRYIAGAQTMSP 97 (301)
T ss_dssp HHHHHHHHT------------------TSS-CCEEEECTTTCCEEEECCTTCEECCH
T ss_pred HHHHHHHHc------------------CCC-CceEEEECCCCEEEEeecCCCccCCH
Confidence 888877652 233 88876 34578999999 9988864
|
| >1es5_A DD-transpeptidase; penicillin-binding, serine peptidase, BET lactamase, hydrolase carboxypeptidase, hydrolase; 1.40A {Streptomyces SP} SCOP: e.3.1.1 PDB: 1skf_A 1es2_A 1j9m_A 1esi_A 1es3_A 1es4_A | Back alignment and structure |
|---|
Probab=98.04 E-value=1.1e-05 Score=85.02 Aligned_cols=42 Identities=21% Similarity=0.260 Sum_probs=36.0
Q ss_pred ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 391 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 391 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
..|++++.+ +.+..|++||+||++|+++++ ++|+++||++|.
T Consensus 17 ~tG~vl~~~-------------n~~~~~~~AS~tKlmta~~~l---~~g~l~l~~~v~ 58 (262)
T 1es5_A 17 GTGTTLYTK-------------AADTRRSTGSTTKIMTAKVVL---AQSNLNLDAKVT 58 (262)
T ss_dssp TTCCEEEEE-------------STTCCBCCGGGGHHHHHHHHH---TCTTCCTTCEEE
T ss_pred CCCCEEEEE-------------CCCCcCCcHHHHHHHHHHHHH---HcCCCCCCCeEE
Confidence 578887653 468899999999999999987 899999999876
|
| >4hes_A Beta-lactamase class A-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, COG COG2367, H; HET: MSE; 1.90A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=98.03 E-value=5.3e-05 Score=80.40 Aligned_cols=72 Identities=18% Similarity=0.339 Sum_probs=52.2
Q ss_pred hHHHHHHHHHHHHhcccCccceeEEEEeecCe---EEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCC
Q 002927 363 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGE---VIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNG 439 (864)
Q Consensus 363 ~~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~---~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G 439 (864)
..++..++..+++....+. .++.+..+.+++ +++.+ ++|+.|+.||++|++++++++..+++|
T Consensus 11 ~~l~~~l~~~~~~~~~~~~-~~~~v~~l~d~~~~~vl~~~-------------n~d~~~~~AS~~Kl~~~~~~~~~v~~G 76 (275)
T 4hes_A 11 KSLEHQLDTVIKELAPAGN-ISYAVLQFDDEEEPTLIAAR-------------GENTVHSSASLIKVLIMEYVFHLARTE 76 (275)
T ss_dssp HHHHHHHHHHHHHHCTTSE-EEEEEEEECTTSCCEEEEEE-------------STTCCEECGGGGHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHhcccCCc-eEEEEEEEEcCCCceEEEEE-------------CCCceecchHHHHHHHHHHHHHHHHcC
Confidence 3566677777776654332 344444444443 34321 668899999999999999999999999
Q ss_pred CCCccCchh
Q 002927 440 KLKLEENIA 448 (864)
Q Consensus 440 ~l~ld~~v~ 448 (864)
+|+||++|.
T Consensus 77 ~l~l~~~v~ 85 (275)
T 4hes_A 77 QLDINDTVP 85 (275)
T ss_dssp SSCTTCEEE
T ss_pred CCCccceEE
Confidence 999999875
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=97.93 E-value=1.2e-05 Score=87.77 Aligned_cols=37 Identities=24% Similarity=0.129 Sum_probs=29.3
Q ss_pred hcCeeccCCCCCCeEEccCC--CCceEEEecccccccCh
Q 002927 171 VDGFFNGDPHPGNFLVSKDP--PHRPILLDFGLTKKLSS 207 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~--~g~i~LiDFG~~~~l~~ 207 (864)
..+++|+|+||+|||++.+. .+.+.||||+.+..=++
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~ 220 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHR 220 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECT
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCC
Confidence 35899999999999997531 15789999998876554
|
| >1xp4_A D-alanyl-D-alanine carboxypeptidase; five-stranded antiparallel beta-sheet, omega-like loop, hydrolase; 2.80A {Streptococcus pneumoniae R6} SCOP: b.105.1.1 e.3.1.1 | Back alignment and structure |
|---|
Probab=97.92 E-value=8.1e-05 Score=82.43 Aligned_cols=114 Identities=15% Similarity=0.184 Sum_probs=73.0
Q ss_pred ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchhhhcccCccCCCCccCHHhHhc-
Q 002927 391 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLN- 469 (864)
Q Consensus 391 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~~ylP~~~~~~~~~ITir~LLt- 469 (864)
..|++++++ +.|..|++||+||++|++++++.+++|+|+||++|.- +-.+...
T Consensus 23 ~tG~vl~~~-------------n~d~~~~~AS~tKlmta~~vl~~i~~G~l~ld~~V~v-------------s~~~~~~~ 76 (379)
T 1xp4_A 23 NTGKILYEK-------------DATQPVEIASITKLITVYLVYEALENGSITLSTPVDI-------------SDYPYQLT 76 (379)
T ss_dssp TTTEEEEEE-------------SCSSCEECGGGGHHHHHHHHHHHHHHTSSCTTCEEEC-------------CHHHHHTT
T ss_pred CCCcEEEEE-------------CCCCcCCchHHHHHHHHHHHHHHHHcCCCCCCCEEEE-------------cHHHHhhc
Confidence 578888753 5678999999999999999999999999999998751 1111110
Q ss_pred ---CCCCCCCCCCCccCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHHHHhC--CCHHHHHHHHhh
Q 002927 470 ---HTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASG--KKFQEILEEGII 544 (864)
Q Consensus 470 ---HtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~lLg~iie~vtG--~~~~~~~~~~if 544 (864)
--|.+. .. ....+.++++..+.- +|. |. ..-.++|.+.| ..|-+.|.++.
T Consensus 77 ~~~~~S~~~--------l~-g~~~tv~dLl~~~ii------------~S~-Nd--Aa~aLae~vgGs~~~Fv~~MN~~a- 131 (379)
T 1xp4_A 77 TNSEASNIP--------ME-ARNYTVEELLEATLV------------SSA-NS--AAIALAEKIAGSEKDFVDMMRAKL- 131 (379)
T ss_dssp TSCCSSCCC--------CT-TCEEEHHHHHHHHHH------------HCC-HH--HHHHHHHHHHSSHHHHHHHHHHHH-
T ss_pred cCCCCceee--------EC-CcEEEHHHHHHHHHh------------cCc-cH--HHHHHHHHcCCCHHHHHHHHHHHH-
Confidence 011111 00 112456666666532 221 11 12334566666 34778887765
Q ss_pred hccCCCCccCC
Q 002927 545 QPLSIDGELYI 555 (864)
Q Consensus 545 ~PLgm~~t~~~ 555 (864)
+.|||++|.|.
T Consensus 132 ~~LG~~~T~f~ 142 (379)
T 1xp4_A 132 LEWGIQDATVV 142 (379)
T ss_dssp HHTTCCSCBCC
T ss_pred HHcCCceEEee
Confidence 89999999764
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.90 E-value=2.1e-05 Score=85.14 Aligned_cols=33 Identities=21% Similarity=0.226 Sum_probs=26.7
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+++|+|+||+|||++.+ +.+.||||+.+..-
T Consensus 186 ~~~liHgDl~~~Nil~~~~--~~~~lIDf~~a~~g 218 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGD--ELSGLIDFYFACND 218 (322)
T ss_dssp CEEEECSCCCGGGEEEETT--EEEEECCCTTCEEE
T ss_pred CcccCCCCCCccCEEEeCC--ceEEEecchhccCc
Confidence 3689999999999999853 33479999988763
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=3.5e-05 Score=85.32 Aligned_cols=78 Identities=15% Similarity=0.221 Sum_probs=52.0
Q ss_pred ccccccccccceeeEEEEecC---------CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHH
Q 002927 8 FVETPLATASIAQVHRATLVD---------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 78 (864)
Q Consensus 8 fd~~plasaSigqV~~A~l~~---------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 78 (864)
++-+|++.|....+|+....+ ++.+++|+-.++....
T Consensus 36 ~~~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~---------------------------------- 81 (369)
T 3c5i_A 36 LRVKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDEL---------------------------------- 81 (369)
T ss_dssp EEEEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGT----------------------------------
T ss_pred eEEEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccce----------------------------------
Confidence 345789999999999998753 2799999877653211
Q ss_pred hHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCC
Q 002927 79 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLN 142 (864)
Q Consensus 79 ~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~ 142 (864)
+|...|++.++.++.. .+ +|+++......++|||++|.++.
T Consensus 82 ----~~~~~E~~~l~~L~~~------------------g~-~P~~~~~~~~~~v~e~i~G~~l~ 122 (369)
T 3c5i_A 82 ----YNTISEFEVYKTMSKY------------------KI-APQLLNTFNGGRIEEWLYGDPLR 122 (369)
T ss_dssp ----SCHHHHHHHHHHHHHT------------------TS-SCCEEEEETTEEEEECCCSEECC
T ss_pred ----ecHHHHHHHHHHHHhc------------------CC-CCceEEecCCcEEEEEecCCcCC
Confidence 1334577777777652 24 78887644568999999998764
|
| >2wuq_A BLAB, beta-lactamase regulatory protein BLAB; class A beta-lactamase fold, transcription regulation, beta-lactamase induction, transcription; 1.80A {Streptomyces cacaoi} | Back alignment and structure |
|---|
Probab=97.85 E-value=0.00013 Score=79.02 Aligned_cols=37 Identities=22% Similarity=0.141 Sum_probs=33.8
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchhh
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIAN 449 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~~ 449 (864)
+++..|+.||++|++++++++..+++|++++|++|..
T Consensus 38 ~~~~~~~pgSt~K~~~a~aal~~~~~G~~~~~~~v~~ 74 (318)
T 2wuq_A 38 DPDTELPTASLVKLPLALATLERIRLGEVDGAQQIEV 74 (318)
T ss_dssp STTCCEECGGGGHHHHHHHHHHHHHTTSSCTTCEEEE
T ss_pred CCCCccccHHHHHHHHHHHHHHHHhCCCCCCCCeEEe
Confidence 4467899999999999999999999999999999864
|
| >3mzf_A D-alanyl-D-alanine carboxypeptidase DACA; beta-lactam antibiotic, penicillin-binding protein, DD- carboxypeptidase, hydrolase; HET: IM2; 1.50A {Escherichia coli} PDB: 1nzu_A 1nzo_A* 3beb_A* 3bec_A* 3mzd_A* 3mze_A* 1z6f_A* 1nj4_A 1hd8_A 1sdn_A 4drt_A | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00017 Score=79.11 Aligned_cols=45 Identities=22% Similarity=0.271 Sum_probs=39.1
Q ss_pred ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 391 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 391 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
..|++++++ +.|..|++||+||++|+++++..+++|+++||++|.
T Consensus 26 ~tG~vL~~k-------------n~d~~~~~AS~tKlmTa~~vl~~i~~G~l~ld~~v~ 70 (363)
T 3mzf_A 26 NSGKVLAEQ-------------NADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVT 70 (363)
T ss_dssp TTCCEEEEE-------------STTCCBCCGGGHHHHHHHHHHHHHHTTSCCTTCEEE
T ss_pred CCCCEeEEE-------------CCCCcCcchHHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 467877753 567889999999999999999999999999999764
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.79 E-value=3.5e-05 Score=87.03 Aligned_cols=35 Identities=20% Similarity=0.364 Sum_probs=29.6
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
...++|+|+||+|||++.+ + ++||||+.+..-++.
T Consensus 231 ~~~liHGDl~~~Nil~~~~--~-~~lID~e~a~~G~p~ 265 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQD--S-TQVIDPEFSFYGPMG 265 (420)
T ss_dssp CCEEECSCCSGGGEEECSS--C-EEECCCTTCEEECHH
T ss_pred CCeEEecCCCCCcEEEeCC--C-CEEEeCcccccCchH
Confidence 5789999999999999854 3 999999988876653
|
| >3ita_A D-alanyl-D-alanine carboxypeptidase DACC; ppenicillin-binding protein, BP6, DD-carboxypeptidase, peptidoglycan, ampicillin, acyl-enzyme complex; HET: AIX AIC; 1.80A {Escherichia coli} PDB: 3it9_A* 3itb_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00013 Score=79.66 Aligned_cols=45 Identities=22% Similarity=0.303 Sum_probs=39.5
Q ss_pred ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 391 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 391 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
..|++++++ +.|..|+++|+||++|+++++..+++|+++||++|.
T Consensus 22 ~tG~vL~~k-------------n~d~~~~~AS~tKlmTa~~vl~~i~~G~l~ld~~v~ 66 (352)
T 3ita_A 22 ASGKVLAEG-------------NADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVT 66 (352)
T ss_dssp TTCCEEEEE-------------STTCCBCCGGGHHHHHHHHHHHHHHTTSSCTTCEEE
T ss_pred CCCCEeEEE-------------CCCCcccchHHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 568888753 567889999999999999999999999999999875
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.77 E-value=4.9e-05 Score=82.49 Aligned_cols=33 Identities=27% Similarity=0.419 Sum_probs=26.9
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+++|+|+||+|||++ + .+.||||+.++.-+.
T Consensus 194 ~~~l~HgD~~~~Nil~~-~---~~~lIDfe~a~~g~~ 226 (328)
T 1zyl_A 194 TVLRLHGDCHAGNILWR-D---GPMFVDLDDARNGPA 226 (328)
T ss_dssp CCEECCSSCSGGGEEES-S---SEEECCCTTCCEECT
T ss_pred CeeeeeCCCCcccEeEc-C---CCEEEECCCCCcCcH
Confidence 35789999999999997 3 799999988765443
|
| >1alq_A CP254 beta-lactamase; hydrolase, circular permuted, antibiotic resistance; 1.80A {Staphylococcus aureus} SCOP: e.3.1.1 | Back alignment and structure |
|---|
Probab=97.72 E-value=4.6e-05 Score=80.53 Aligned_cols=140 Identities=14% Similarity=0.091 Sum_probs=86.7
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchhhhcccCccCCCCccCHHhHhcCCCCCCCCCCCccCCCCcCCCCH
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDW 492 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~ 492 (864)
+.+..|+.||++|++|+++++..+++|+ ||++|.- +-++++.+ ||+.... +....+.
T Consensus 76 n~d~~~~~ASt~Kl~ta~~~l~~v~~G~--ld~~v~i-------------~~~~~~~~-s~i~~~~-------~g~~~tl 132 (266)
T 1alq_A 76 NSDKRFAYASTSKAINSAILLEQVPYNK--LNKKVHI-------------NKDDIVAY-SPILEKY-------VGKDITL 132 (266)
T ss_dssp STTSCEECGGGHHHHHHHHHHHSSCGGG--TTCEEEE-------------CGGGCCSS-CTTGGGG-------TTEEEEH
T ss_pred CCCCeEecHHHHHHHHHHHHHHHHhcCC--CCceEEe-------------cHHHhcCC-CCceecC-------CCCceeH
Confidence 4578899999999999999999999999 8887651 11222222 2332211 0112456
Q ss_pred HHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccC
Q 002927 493 DECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDT 572 (864)
Q Consensus 493 ~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~ 572 (864)
.++++.+.. ||+ |. ....+++++.|. +.|.+ .++.|||++|.+....+. +
T Consensus 133 ~~Ll~~mi~------------~Sd-N~--Aa~~L~~~lgG~---~~~n~-~~~~lG~~~T~~~~~~~~----l------- 182 (266)
T 1alq_A 133 KALIEASMT------------YSD-NT--ANNKIIKEIGGI---KKVKQ-RLKELGDKVTNPVRYEIE----L------- 182 (266)
T ss_dssp HHHHHHHHH------------HCC-HH--HHHHHHHHHTCH---HHHHH-HHHHTTCCSCCCCCCTTG----G-------
T ss_pred HHHHHHHHh------------cCC-HH--HHHHHHHHcCCH---HHHHH-HHHHcCCCCcccCCCchh----h-------
Confidence 666655543 232 22 244577777773 34654 568899999754211000 0
Q ss_pred CcccccccCCCCCCCCCCCCCCcchhhhhhcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 573 DDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 573 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
. ....+..+.++|+.||+++++++++|+.+++.
T Consensus 183 ------~------------------------------------~~~~~~~~~~tTa~d~a~l~~~l~~g~~ls~~ 215 (266)
T 1alq_A 183 ------N------------------------------------YYSPKSKKDTSTPAAFGKTLNKLIANGKLSKE 215 (266)
T ss_dssp ------G------------------------------------CCCTTCCTTEECHHHHHHHHHHHTTSSSCCHH
T ss_pred ------c------------------------------------ccCCCCCCCcCCHHHHHHHHHHHHcCCCCCHH
Confidence 0 00012345679999999999999999887765
|
| >3qhy_A Beta-lactamase; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.0012 Score=69.72 Aligned_cols=66 Identities=21% Similarity=0.286 Sum_probs=42.8
Q ss_pred hHHHHHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCC
Q 002927 363 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 442 (864)
Q Consensus 363 ~~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ 442 (864)
..+.+.+.++....- .-.|+.+.=...|+++ . + +.|..|+.+|++|++++++++..+++| +
T Consensus 12 ~~l~~~l~~l~~~~~---~~~gv~v~d~~tg~~l-~--~-----------n~d~~~~~AS~~Kl~~~~~~l~~~~~g--~ 72 (271)
T 3qhy_A 12 QATHKEFSQLEKKFD---ARLGVYAIDTGTNQTI-A--Y-----------RPNERFAFASTYKALAAGVLLQQNSTK--K 72 (271)
T ss_dssp --CHHHHHHHHHHHT---CEEEEEEEETTTCCEE-E--E-----------STTCCEECGGGHHHHHHHHHHHHSCGG--G
T ss_pred HHHHHHHHHHHHhcC---CeEEEEEEECCCCCEE-E--E-----------CCCCcccchHHHHHHHHHHHHHHhhCC--C
Confidence 455566666665531 2224333223466665 2 2 567889999999999999999999888 6
Q ss_pred ccCch
Q 002927 443 LEENI 447 (864)
Q Consensus 443 ld~~v 447 (864)
||++|
T Consensus 73 ld~~v 77 (271)
T 3qhy_A 73 LDEVI 77 (271)
T ss_dssp GGSEE
T ss_pred CCCeE
Confidence 67654
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00011 Score=80.51 Aligned_cols=35 Identities=20% Similarity=0.280 Sum_probs=29.5
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+++|+|+||+||+++.+ +.+.||||+.++.-++
T Consensus 205 ~~~~~HgD~~~~N~l~~~~--~~~~~iD~e~~~~~~~ 239 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNE--ESIYIIDWDEPMLAPK 239 (339)
T ss_dssp GCEEECSCCCGGGEEECGG--GCEEECCCSSCEEECT
T ss_pred CceeEeCCCCcCCEEEeCC--CeEEEEECCCCeeCCH
Confidence 3589999999999999854 6799999998876554
|
| >3hun_A Penicillin-binding protein 4; ampicillin, beta-lactamase, serine type D-Ala, D-Ala-carboxypeptidase, antibiotics; HET: ZZ7; 2.00A {Staphylococcus aureus} PDB: 3hum_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00095 Score=74.63 Aligned_cols=45 Identities=22% Similarity=0.336 Sum_probs=39.5
Q ss_pred ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 391 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 391 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
..|++++++ +.|..+++||+||++|+++++..+++|+|+||++|.
T Consensus 79 ~TG~vL~~k-------------Nad~~~~pAS~TKlMTa~~vle~i~~Gkl~Ld~~Vt 123 (453)
T 3hun_A 79 QTGQLLYQY-------------NIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVT 123 (453)
T ss_dssp TTSBEEEEE-------------STTCCBCCGGGHHHHHHHHHHHHHHTTSSCTTCEEE
T ss_pred CCCCEEEEE-------------CCCCcccchHHHHHHHHHHHHHHHhcCCCCCCCEEE
Confidence 667877753 568889999999999999999999999999999764
|
| >3lez_A Beta-lactamase; antibiotic resistance, halotolerant, DEEP- SEA bacterium, hydrolase; HET: EPE; 1.25A {Oceanobacillus iheyensis} SCOP: e.3.1.1 | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0021 Score=67.50 Aligned_cols=33 Identities=24% Similarity=0.296 Sum_probs=28.0
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCch
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENI 447 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v 447 (864)
+.+..|+.+|++|++++++++..+++| +||++|
T Consensus 32 n~d~~~~~AS~~Kl~~~~~~l~~~~~g--~ld~~v 64 (260)
T 3lez_A 32 RENERFAYTSTFKPLAVGAVLQTKSDE--ELEETI 64 (260)
T ss_dssp STTSEEECGGGGHHHHHHHHHHHCCHH--HHHSEE
T ss_pred CCCCcccchHHHHHHHHHHHHHhccCC--CCCceE
Confidence 568889999999999999999998887 466554
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0003 Score=79.58 Aligned_cols=32 Identities=9% Similarity=0.136 Sum_probs=25.5
Q ss_pred ccccccccccceeeEEEEecC--------CCEEEEEEecC
Q 002927 8 FVETPLATASIAQVHRATLVD--------GRQVVVKVQHQ 39 (864)
Q Consensus 8 fd~~plasaSigqV~~A~l~~--------G~~VAVKv~~p 39 (864)
++-++|+.|-...||+....+ ++.|+||+.++
T Consensus 76 ~~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~ 115 (429)
T 1nw1_A 76 LRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN 115 (429)
T ss_dssp EEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS
T ss_pred eEEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCC
Confidence 344688899999999998753 58999999854
|
| >3ny4_A Beta-lactamase, penicillinase; penicillin binding protein, beta-lactam complex, hydrolase-A complex; HET: SMX; 1.22A {Mycobacterium tuberculosis} PDB: 3m6b_A* 3dwz_A* 3iqa_A* 3cg5_A* 3m6h_A* 4df6_A* 2gdn_A 3vfh_A* 3vff_A* 3n8l_A* 3n6i_A* 3n7w_A* 3n8r_A* 3n8s_A* 3nbl_A* 3nc8_A* 3nck_A* 3nde_A* 3ndg_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0025 Score=67.02 Aligned_cols=33 Identities=15% Similarity=0.075 Sum_probs=28.0
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCch
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENI 447 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v 447 (864)
+.+..|+.+|++|++++++++..+++| +||++|
T Consensus 33 n~d~~~~~AS~~Kl~~~~~~l~~~~~~--~ld~~v 65 (265)
T 3ny4_A 33 RADERFAFCSTFAAPLVAAVLHQNPLT--HLDKLI 65 (265)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHSCGG--GGGCEE
T ss_pred CCCCceechHHHHHHHHHHHHHHhhcC--CCCceE
Confidence 567889999999999999999998876 566654
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00041 Score=77.02 Aligned_cols=36 Identities=22% Similarity=0.309 Sum_probs=28.9
Q ss_pred cCeeccCCCCCCeEEccC--CCCceEEEecccccccCh
Q 002927 172 DGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 172 ~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~~ 207 (864)
..++|+|++++|||++.+ +++.++||||-.++.-++
T Consensus 220 ~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~~~ 257 (379)
T 3feg_A 220 VVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYNYR 257 (379)
T ss_dssp EEEECSCCCGGGEEEESCC---CCEEECCCTTCEEEEH
T ss_pred cEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcCCh
Confidence 479999999999999854 136899999999886544
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00049 Score=78.35 Aligned_cols=78 Identities=12% Similarity=0.115 Sum_probs=51.6
Q ss_pred ccccccccccceeeEEEEecC-CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 8 FVETPLATASIAQVHRATLVD-GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 8 fd~~plasaSigqV~~A~l~~-G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
++-++|+.|-...+|+....+ ++.+++|+..++... -+|..
T Consensus 111 ~~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~--------------------------------------~idR~ 152 (458)
T 2qg7_A 111 LEFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE--------------------------------------IINRE 152 (458)
T ss_dssp EEEEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS--------------------------------------CSCHH
T ss_pred eEEEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh--------------------------------------hcCHH
Confidence 445789999999999998754 588999987654321 12334
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCC
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLN 142 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~ 142 (864)
+|++.+..+... .+ .|+++......++|||++|.++.
T Consensus 153 ~E~~vl~~L~~~------------------gl-~P~ll~~~~~G~v~e~I~G~~l~ 189 (458)
T 2qg7_A 153 REKKISCILYNK------------------NI-AKKIYVFFTNGRIEEFMDGYALS 189 (458)
T ss_dssp HHHHHHHHHTTS------------------SS-BCCEEEEETTEEEEECCCSEECC
T ss_pred HHHHHHHHHHhc------------------CC-CCCEEEEeCCeEEEEeeCCccCC
Confidence 677777776431 22 47777633445799999998776
|
| >4dxb_A RG13, maltose-binding periplasmic protein, beta-lactama chimera; TEM, beta-lactamase, MBP, allosteric regulation, zinc bindin maltose binding; 2.29A {Escherichia coli} PDB: 4dxc_A | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0034 Score=74.65 Aligned_cols=36 Identities=28% Similarity=0.475 Sum_probs=33.3
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
+.|..|+++|++|+++++++++.+++|+++||++|.
T Consensus 417 ~~d~~fp~aS~~K~~~~~~~l~~~~~g~~~l~~~v~ 452 (637)
T 4dxb_A 417 RPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIH 452 (637)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHHTTSCCTTCEEC
T ss_pred CCCCeeccHHHHHHHHHHHHHHHHhcCCCCCCceEE
Confidence 457789999999999999999999999999999874
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0027 Score=71.38 Aligned_cols=79 Identities=18% Similarity=0.253 Sum_probs=57.4
Q ss_pred ccccccccccceeeEEEEecC--------CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHh
Q 002927 8 FVETPLATASIAQVHRATLVD--------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 79 (864)
Q Consensus 8 fd~~plasaSigqV~~A~l~~--------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~ 79 (864)
++-+++..|-...+|+....+ ++.++||+..++...
T Consensus 73 ~~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~------------------------------------ 116 (424)
T 3mes_A 73 IEVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK------------------------------------ 116 (424)
T ss_dssp EEEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C------------------------------------
T ss_pred eEEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch------------------------------------
Confidence 445789889999999998753 689999986654321
Q ss_pred HhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCC
Q 002927 80 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLND 143 (864)
Q Consensus 80 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~ 143 (864)
-+|-.+|.+.++.++.. .+ +|+++......++|||++|.++..
T Consensus 117 --~idR~~E~~~l~~L~~~------------------gi-~P~l~~~~~~~~I~efI~G~~l~~ 159 (424)
T 3mes_A 117 --FYDSKVELDVFRYLSNI------------------NI-APNIIADFPEGRIEEFIDGEPLTT 159 (424)
T ss_dssp --CCCHHHHHHHHHHHHHT------------------TS-SCCEEEEETTEEEEECCCSEECCT
T ss_pred --hcCHHHHHHHHHHHHhc------------------CC-CCCEEEEcCCCEEEEEeCCccCCh
Confidence 13456688888888762 23 688876445689999999988753
|
| >3mfd_A D-alanyl-D-alanine carboxypeptidase DACB; penicillin-binding protein 5*, beta-lactamase, structural GE PSI-2, protein structure initiative; HET: CIT; 1.75A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0071 Score=65.27 Aligned_cols=39 Identities=23% Similarity=0.407 Sum_probs=29.9
Q ss_pred ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCch
Q 002927 391 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENI 447 (864)
Q Consensus 391 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v 447 (864)
..|++++++ +.|..++++|+||++|++++ +++|+ ||++|
T Consensus 18 ~tG~vL~~k-------------n~d~~~~pAS~tKlmTa~~a---l~~g~--ld~~v 56 (334)
T 3mfd_A 18 ASGRVLYAK-------------DEHQKRRIASITKIMTAVLA---IESGK--MDQTV 56 (334)
T ss_dssp TTCCEEEEE-------------STTCCBCCGGGGHHHHHHHH---HHTTC--TTSEE
T ss_pred CCCcEeeEE-------------CCCCcccchHHHHHHHHHHH---HhcCC--CCCeE
Confidence 568888753 56788999999999998774 57886 56554
|
| >2bcf_A Probable D-alanyl-D-alanine carboxypeptidase DACB2; penicillin-binding protein, DD-2 carboxypeptidase, directed evolution; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=95.79 E-value=0.038 Score=58.25 Aligned_cols=44 Identities=16% Similarity=0.119 Sum_probs=32.0
Q ss_pred EEEEe--ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCch
Q 002927 386 QVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENI 447 (864)
Q Consensus 386 ~v~v~--~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v 447 (864)
++.|+ ..|++++.+ +.+..|+.+|++|++|+++++..+ +||++|
T Consensus 21 ~~~v~D~~tG~vl~~~-------------n~d~~~~pAS~tKlmta~~~le~~-----~ld~~v 66 (276)
T 2bcf_A 21 TWIVADLDSGQVLAGR-------------DQNVAHPPASTIKVLLALVALDEL-----DLNSTV 66 (276)
T ss_dssp EEEEEETTTCEEEEEE-------------STTCCBCCGGGHHHHHHHHHHHHC-----CTTCEE
T ss_pred EEEEEECCCCCEEEEE-------------CCCCcCCcHHHHHHHHHHHHHHhC-----CCCCEE
Confidence 34444 568877653 457889999999999999998753 366654
|
| >3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* | Back alignment and structure |
|---|
Probab=95.19 E-value=0.063 Score=59.81 Aligned_cols=42 Identities=12% Similarity=0.168 Sum_probs=26.1
Q ss_pred cccccccccccceeeEEEEecC--------CCEEEEEEecCChHHHHHHH
Q 002927 7 DFVETPLATASIAQVHRATLVD--------GRQVVVKVQHQGIKTIILED 48 (864)
Q Consensus 7 ~fd~~plasaSigqV~~A~l~~--------G~~VAVKv~~p~i~~~~~~D 48 (864)
+++-++|.-|-.-.+|+.+..+ ++.|+|++--++....+..+
T Consensus 54 ~l~v~~lsGG~SN~~y~v~~~~~~~~~~~~~~~~llRi~g~~~~~~~~r~ 103 (401)
T 3g15_A 54 EFHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNK 103 (401)
T ss_dssp GCEEEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC---------
T ss_pred CEEEEEeCCccccceEEEEECCCCcccccCCCeEEEEeCCCCccchhhhh
Confidence 4555788888888999998754 36799999888776554433
|
| >3cjm_A Putative beta-lactamase; NP_815223.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; HET: MSE; 1.50A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=94.78 E-value=0.049 Score=57.61 Aligned_cols=36 Identities=19% Similarity=0.067 Sum_probs=33.5
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
+.+..|+.||++|++++++++..+++|+++||++|.
T Consensus 68 n~d~~~~~AS~~Kl~~a~~~l~~v~~G~l~ld~~v~ 103 (282)
T 3cjm_A 68 NGQHEFYTASTIKVPLTMLVADTVASGQKKWTDLIP 103 (282)
T ss_dssp STTCCEECGGGGHHHHHHHHHHHHHTTSCCTTCEEE
T ss_pred CCCCeeccHHHHHHHHHHHHHHHHHCCCCCCcceEE
Confidence 557889999999999999999999999999999875
|
| >2xep_A ORF12; hydrolase; 1.50A {Streptomyces clavuligerus} PDB: 2xf3_A* 2xfs_A* 2xft_A 2xgn_A 2xh9_A* | Back alignment and structure |
|---|
Probab=93.27 E-value=0.13 Score=58.17 Aligned_cols=36 Identities=19% Similarity=0.207 Sum_probs=33.2
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
+.|..|.++|++|+++++++++.+++|+++||++|.
T Consensus 164 n~d~~~~~ASt~Kl~~a~~vl~~v~~G~l~ld~~v~ 199 (458)
T 2xep_A 164 APERPMPTGSAYKLYLMRALVAEIEKGTVGWDEILT 199 (458)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHHHTSSCTTCEEE
T ss_pred CCCCcCccHHHHHHHHHHHHHHHHhcCCCCCCCeEE
Confidence 557789999999999999999999999999999874
|
| >2x02_A Beta-lactamase OXA-10; class D, hydrolase, antibiotic resistance; HET: KCX PG4; 1.35A {Pseudomonas aeruginosa} PDB: 1k4e_A* 1k6r_A* 1k6s_A* 1k4f_A* 2x01_A* 2wgv_A* 2wgw_A* 2wkh_A* 2wki_A 2rl3_A* 2hpb_A 2hp9_A 2hp6_A 2wgi_A* 2hp5_A 1fof_A 1k55_A* 1e4d_A* 1ewz_A 1k54_A* ... | Back alignment and structure |
|---|
Probab=92.83 E-value=0.23 Score=51.30 Aligned_cols=31 Identities=19% Similarity=0.086 Sum_probs=25.6
Q ss_pred CccccccccHHHHHHHHHHHHHCCCCCccCchhh
Q 002927 416 SLFPVFSVTKGITAGMLHWLVDNGKLKLEENIAN 449 (864)
Q Consensus 416 t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~~ 449 (864)
..|..||+.|++|+++. .|+|++++++.+.+
T Consensus 43 ~~~~pgStfK~~~~~aa---Le~g~~~~~~~i~~ 73 (248)
T 2x02_A 43 KEYLPASTFKIPNAIIG---LETGVIKNEHQVFK 73 (248)
T ss_dssp CEECCGGGGHHHHHHHH---HHHTSSCCTTCEEC
T ss_pred CCCCChHHHHHHHHHHH---HHcCCCCCCCeEEe
Confidence 34999999999998775 46899999888764
|
| >1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3 | Back alignment and structure |
|---|
Probab=92.75 E-value=1.9 Score=45.99 Aligned_cols=78 Identities=15% Similarity=0.258 Sum_probs=45.3
Q ss_pred CceEEEeecCCcCCCChHHH--hhcCCCHHHHHHHHHHHH-HHHHHh--cCe--e-ccCCCCCCeEEccCCCCceEEEec
Q 002927 128 ETVLILEFMDGIRLNDCESL--EAFGVNKQKVVEEITRAY-AHQIYV--DGF--F-NGDPHPGNFLVSKDPPHRPILLDF 199 (864)
Q Consensus 128 ~~vLvmE~i~G~~L~~~~~~--~~~~~~~~~l~~~~~~~~-l~~i~~--~G~--~-H~D~hPgNIlv~~~~~g~i~LiDF 199 (864)
...++|||++|..|...... .+. +. .+..+.+.+++ +..+.. +++ . +.-=.|+|||+.++ ++++++||.
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~~~~-f~-~~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~-n~~~~~IDh 232 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSAPEV-LT-KSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSER-GATVVPIDS 232 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSHHHH-SC-HHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESB-TTCEEECSC
T ss_pred cceehhhhcCCCccccchhhhhhhh-cC-HHHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCC-CCeEEEEcC
Confidence 34599999999998765221 010 12 23344444444 333221 122 0 11247899999875 467999999
Q ss_pred ccccccChH
Q 002927 200 GLTKKLSSS 208 (864)
Q Consensus 200 G~~~~l~~~ 208 (864)
+++..-+..
T Consensus 233 n~af~~~s~ 241 (342)
T 1cja_A 233 KIIPLDASH 241 (342)
T ss_dssp CCCCCCSSC
T ss_pred CccccCCcH
Confidence 998655443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 864 | ||||
| d1ci9a_ | 377 | e.3.1.1 (A:) Esterase EstB {Burkholderia gladioli | 1e-21 | |
| d2drwa1 | 362 | e.3.1.1 (A:2-363) D-Amino acid amidase DaaA {Ochro | 1e-20 | |
| d1onha_ | 363 | e.3.1.1 (A:) AMPC beta-Lactamase, class C {Enterob | 1e-18 | |
| d2hdsa1 | 358 | e.3.1.1 (A:4-361) AMPC beta-Lactamase, class C {Es | 4e-18 | |
| d1ei5a3 | 333 | e.3.1.1 (A:3-335) D-aminopeptidase, N-terminal dom | 6e-17 | |
| d1yqsa1 | 345 | e.3.1.1 (A:3-347) D-ala carboxypeptidase/transpept | 7e-15 |
| >d1ci9a_ e.3.1.1 (A:) Esterase EstB {Burkholderia gladioli [TaxId: 28095]} Length = 377 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Esterase EstB species: Burkholderia gladioli [TaxId: 28095]
Score = 95.9 bits (237), Expect = 1e-21
Identities = 72/319 (22%), Positives = 122/319 (38%), Gaps = 29/319 (9%)
Query: 363 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFS 422
+ + A+L + + +++G + GE++ + G+ R RP++ D+LF + S
Sbjct: 2 ASLAARLDAVFDQALRERRLVGAVAIVARHGEILYRRAQGLADREAGRPMREDTLFRLAS 61
Query: 423 VTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGK----DLIKVHHVLNHTSGLHNVS 478
VTK I A + LV G+L L+ + PEF+ L+ +HH+L HTSGL
Sbjct: 62 VTKPIVALAVLRLVARGELALDAPVTRWLPEFRPRLADGSEPLVTIHHLLTHTSGLGYWL 121
Query: 479 VD----------LSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIE 528
++ +S L D DE L R+A + PG + Y + G ++E
Sbjct: 122 LEGAGSVYDRLGISDGIDLRDFDLDENLRRLASAPLSFAPGSG--WQYSLALDVLGAVVE 179
Query: 529 RASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLR 588
RA+G+ ++ + QPL + G R A D P
Sbjct: 180 RATGQPLAAAVDALVAQPLGMR---DCGFVSAEPERFAVPYHDGQP---------EPVRM 227
Query: 589 LPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAA-LADGGVVPPP 647
P AA+ A + A + SA + R A A+ G +P
Sbjct: 228 RDGIEVPLPEGHGAAVRFAPSRVFEPGAYPSGGAGMYGSADDVLRALEAIRANPGFLPET 287
Query: 648 HSRLSKPPLGSHPHIPKFP 666
+ ++ + P
Sbjct: 288 LADAARRDQAGVGAETRGP 306
|
| >d2drwa1 e.3.1.1 (A:2-363) D-Amino acid amidase DaaA {Ochrobactrum anthropi [TaxId: 529]} Length = 362 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-Amino acid amidase DaaA species: Ochrobactrum anthropi [TaxId: 529]
Score = 92.5 bits (228), Expect = 1e-20
Identities = 50/284 (17%), Positives = 95/284 (33%), Gaps = 18/284 (6%)
Query: 363 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFS 422
SD+ ++ L + G ++G+ + GE +G +++ P+ D LF + S
Sbjct: 1 SDLNNAIQGILDDHVARG-VVGVSLALCLPGEETSLYQSGYADKFNKMPMTGDHLFRIAS 59
Query: 423 VTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLS 482
TK A LH LV +G + L+E I +P+ + V +LNH SGL + +
Sbjct: 60 CTKSFIATGLHLLVQDGTVDLDEPITRWFPDL--PKAAQMPVRILLNHRSGLPDFETSMP 117
Query: 483 SENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEG 542
+ + + + + + + L G II +GK + + L
Sbjct: 118 MISDKSWTAQEIV--DFSFRHGVQKEPWHGMEYSNTGYVLAGMIIAHETGKPYSDHLRSR 175
Query: 543 IIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLA 602
I PL + R A + ++ +
Sbjct: 176 IFAPLGMKDTWVGTHETFPIEREARGYMHAAADDENPQWDVSGAGDPVDGVWDS------ 229
Query: 603 AITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPP 646
A + + R + ++ AL DG ++
Sbjct: 230 -------TEWFPLSGANAAGDMVSTPRDIVKFLNALFDGRILDQ 266
|
| >d1onha_ e.3.1.1 (A:) AMPC beta-Lactamase, class C {Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]} Length = 363 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: AMPC beta-Lactamase, class C species: Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]
Score = 86.3 bits (212), Expect = 1e-18
Identities = 42/218 (19%), Positives = 89/218 (40%), Gaps = 10/218 (4%)
Query: 360 PIHSD-VEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLF 418
P+ + + + + L + G+ V G+ + G +PV P +LF
Sbjct: 1 PVSEKQLAEVVANTVTPLMKAQSVPGMAVAVIYQGKPHYY-TFGKADIAANKPVTPQTLF 59
Query: 419 PVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVS 478
+ S++K T + + G++ L++ + WP+ I++ + +T+G +
Sbjct: 60 ELGSISKTFTGVLGGDAIARGEISLDDPVTRYWPQLTGKQWQGIRMLDLATYTAGGLPL- 118
Query: 479 VDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEI 538
+ P + D L P+ +PG +LY S L G + + SG +++
Sbjct: 119 -----QVPDEVTDNASLLRFYQNWQPQWKPGTTRLYANASI-GLFGALAVKPSGMPYEQA 172
Query: 539 LEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLN 576
+ +++PL +D +I +P E+ A D +
Sbjct: 173 MTTRVLKPLKLD-HTWINVPKAEEAHYAWGYRDGKAVR 209
|
| >d2hdsa1 e.3.1.1 (A:4-361) AMPC beta-Lactamase, class C {Escherichia coli, cephalosporinase [TaxId: 562]} Length = 358 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: AMPC beta-Lactamase, class C species: Escherichia coli, cephalosporinase [TaxId: 562]
Score = 84.8 bits (208), Expect = 4e-18
Identities = 53/270 (19%), Positives = 106/270 (39%), Gaps = 9/270 (3%)
Query: 364 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSV 423
+ + + L KI G+ V G+ + G +PV +LF + SV
Sbjct: 4 QINDIVHRTITPLIEQQKIPGMAVAVIYQGKPYYF-TWGYADIAKKQPVTQQTLFELGSV 62
Query: 424 TKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSS 483
+K T + + G++KL + WPE + + I + H+ +T+G L
Sbjct: 63 SKTFTGVLGGDAIARGEIKLSDPTTKYWPELTAKQWNGITLLHLATYTAGG------LPL 116
Query: 484 ENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGI 543
+ P + + L P PG ++LY S L G + + SG F++ ++ +
Sbjct: 117 QVPDEVKSSSDLLRFYQNWQPAWAPGTQRLYANSSI-GLFGALAVKPSGLSFEQAMQTRV 175
Query: 544 IQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAA 603
QPL ++ +I +PP E A + ++ G + + S+ + +
Sbjct: 176 FQPLKLN-HTWINVPPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIEDMARWVQSN 234
Query: 604 ITPAVFNMLNIRRAIIPAANGHCSARALAR 633
+ P N +++ I A + + + +
Sbjct: 235 LKPLDINEKTLQQGIQLAQSRYWQTGDMYQ 264
|
| >d1ei5a3 e.3.1.1 (A:3-335) D-aminopeptidase, N-terminal domain {Ochrobactrum anthropi [TaxId: 529]} Length = 333 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-aminopeptidase, N-terminal domain species: Ochrobactrum anthropi [TaxId: 529]
Score = 80.9 bits (198), Expect = 6e-17
Identities = 37/182 (20%), Positives = 70/182 (38%), Gaps = 6/182 (3%)
Query: 367 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKG 426
+ L F+ + + K G V KDGEV++ + G P+ D+ P+ SV+K
Sbjct: 5 SALEAFVRHIPQNYKGPGGVVAVVKDGEVVLQHAWGFADLRTRTPMTLDTRMPICSVSKQ 64
Query: 427 ITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSV--DLSSE 484
T +L V + L++ + +F+ + V + N+ SGL + L
Sbjct: 65 FTCAVLLDAVGEPE-LLDDALEAYLDKFE---DERPAVRDLCNNQSGLRDYWALSVLCGA 120
Query: 485 NPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGII 544
+P + + + + + + +IE +G+ +IL E I
Sbjct: 121 DPEGVFLPAQAQSLLRRLKTTHFEPGSHYSYCNGNFRILADLIEAHTGRTLVDILSERIF 180
Query: 545 QP 546
P
Sbjct: 181 AP 182
|
| >d1yqsa1 e.3.1.1 (A:3-347) D-ala carboxypeptidase/transpeptidase {Streptomyces sp., R61 [TaxId: 1931]} Length = 345 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-ala carboxypeptidase/transpeptidase species: Streptomyces sp., R61 [TaxId: 1931]
Score = 74.8 bits (182), Expect = 7e-15
Identities = 40/165 (24%), Positives = 64/165 (38%), Gaps = 11/165 (6%)
Query: 366 EAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTK 425
+ L+ L + G G V +G I S G+ R R + F V SVTK
Sbjct: 6 DTGLQAVLHTALSQG-APGAMVRVDDNGT-IHQLSEGVADRATGRAITTTDRFRVGSVTK 63
Query: 426 GITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSE- 484
+A +L LVD GKL L+ ++ P D I V V++H SGL++ + D+ ++
Sbjct: 64 SFSAVVLLQLVDEGKLDLDASVNTYLPGL--LPDDRITVRQVMSHRSGLYDYTNDMFAQT 121
Query: 485 ------NPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLC 523
+ + + + PG Y +F
Sbjct: 122 VPGFESVRNKVFSYQDLITLSLKHGVTNAPGAAYSYSNTNFVVAG 166
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 864 | |||
| d2drwa1 | 362 | D-Amino acid amidase DaaA {Ochrobactrum anthropi [ | 100.0 | |
| d1ci9a_ | 377 | Esterase EstB {Burkholderia gladioli [TaxId: 28095 | 100.0 | |
| d1yqsa1 | 345 | D-ala carboxypeptidase/transpeptidase {Streptomyce | 100.0 | |
| d1onha_ | 363 | AMPC beta-Lactamase, class C {Enterobacter cloacae | 100.0 | |
| d1ei5a3 | 333 | D-aminopeptidase, N-terminal domain {Ochrobactrum | 100.0 | |
| d2hdsa1 | 358 | AMPC beta-Lactamase, class C {Escherichia coli, ce | 100.0 | |
| d2dcfa1 | 388 | 6-aminohexanoate-dimer hydrolase NylC {Flavobacter | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.79 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 99.72 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 99.72 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 99.72 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 99.71 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 99.7 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 99.7 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 99.7 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 99.69 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 99.69 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 99.69 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 99.69 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 99.68 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 99.68 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 99.67 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 99.67 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 99.66 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 99.66 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 99.66 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 99.65 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 99.65 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.65 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 99.65 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 99.65 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 99.64 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 99.64 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 99.64 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 99.63 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 99.63 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 99.62 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 99.62 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 99.61 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 99.61 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 99.6 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 99.6 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 99.6 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 99.6 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 99.59 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 99.59 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 99.58 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 99.57 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 99.57 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 99.57 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 99.56 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 99.56 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 99.56 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 99.55 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 99.54 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 99.53 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 99.52 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 99.52 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 99.52 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 99.52 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.5 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 99.5 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 99.5 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 99.5 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 99.48 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 99.47 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 99.45 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 99.44 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 99.41 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.19 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.67 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 98.44 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.3 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 98.18 | |
| d1tvfa2 | 301 | Pencillin binding protein 4 (PbpD), N-terminal dom | 98.05 | |
| d1es5a_ | 260 | D-ala carboxypeptidase/transpeptidase {Streptomyce | 97.74 | |
| d1iysa_ | 261 | beta-Lactamase, class A {Escherichia coli, TOHO-1 | 97.72 | |
| d3beca2 | 259 | Penicillin-binding protein 5, N-terminal domain {E | 97.6 | |
| d1xp4a2 | 269 | D,D-carboxypeptidase DacA, N-terminal domain {Stre | 97.52 | |
| d1e25a_ | 278 | beta-Lactamase, class A {Pseudomonas aeruginosa, P | 97.37 | |
| d1m40a_ | 263 | beta-Lactamase, class A {Escherichia coli, TEM-1 [ | 97.33 | |
| d1bsga_ | 266 | beta-Lactamase, class A {Streptomyces albus G [Tax | 97.32 | |
| d1n9ba_ | 265 | beta-Lactamase, class A {Klebsiella pneumoniae, SH | 97.2 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 97.16 | |
| d1g6aa_ | 266 | beta-Lactamase, class A {Pseudomonas aeruginosa, P | 97.13 | |
| d2cc1a1 | 262 | beta-Lactamase, class A {Mycobacterium fortuitum [ | 97.11 | |
| d1o7ea_ | 267 | beta-Lactamase, class A {Stenotrophomonas maltophi | 97.05 | |
| d1i2sa_ | 255 | beta-Lactamase, class A {Bacillus licheniformis [T | 96.93 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 96.83 | |
| d1djaa_ | 258 | beta-Lactamase, class A {Staphylococcus aureus [Ta | 96.81 | |
| d1buea_ | 265 | beta-Lactamase, class A {Enterobacter cloacae, NMC | 94.34 | |
| d1pyya4 | 368 | Penicillin-binding protein 2x (pbp-2x), transpepti | 92.56 |
| >d2drwa1 e.3.1.1 (A:2-363) D-Amino acid amidase DaaA {Ochrobactrum anthropi [TaxId: 529]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-Amino acid amidase DaaA species: Ochrobactrum anthropi [TaxId: 529]
Probab=100.00 E-value=4e-48 Score=430.92 Aligned_cols=264 Identities=20% Similarity=0.256 Sum_probs=209.7
Q ss_pred HHHHHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCc
Q 002927 364 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKL 443 (864)
Q Consensus 364 ~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~l 443 (864)
++...++.++++.+++ .++|++|+|+++|++++..++|++|.++++|+++||+|+|+|+||+|||+++++|+|+|+|+|
T Consensus 2 ~~~~~i~~~~~~~~~~-g~~g~~v~v~~~g~~v~~~~~G~ad~~~~~p~t~dt~f~i~SvsK~~ta~~i~~lve~G~l~l 80 (362)
T d2drwa1 2 DLNNAIQGILDDHVAR-GVVGVSLALCLPGEETSLYQSGYADKFNKMPMTGDHLFRIASCTKSFIATGLHLLVQDGTVDL 80 (362)
T ss_dssp HHHHHHHHHHHHHHTT-TCCEEEEEEECTTSCEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHTTSCCT
T ss_pred cHHHHHHHHHHHHHHc-CCCeEEEEEEECCEEEEEEeEEEeccccCCCCCCCCeEEeeehHHHHHHHHHHHHHHcCCCCC
Confidence 5678899999998875 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCchhhhcccCccCCCCccCHHhHhcCCCCCCCCCCCccCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHHH
Q 002927 444 EENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLC 523 (864)
Q Consensus 444 d~~v~~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~lL 523 (864)
||||.+|+|+++. .++|||+|||+|||||+++...... ........+++++.+...++.++||+.|.|||.+|. ||
T Consensus 81 dd~v~~ylp~~~~--~~~iTi~~LL~htSGl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~pg~~~~Ysn~~~~-ll 156 (362)
T d2drwa1 81 DEPITRWFPDLPK--AAQMPVRILLNHRSGLPDFETSMPM-ISDKSWTAQEIVDFSFRHGVQKEPWHGMEYSNTGYV-LA 156 (362)
T ss_dssp TSBGGGTCTTSTT--GGGCBGGGGTTTCSCCCCCTTTSBS-SCCCCCCHHHHHHHHHHHSCCCCTTSSCCCCSHHHH-HH
T ss_pred Cceeeeeeccccc--cccccccccccccCCCCcccccccc-ccccccchhHHHHhhhccCccccccceeccccccee-cc
Confidence 9999999999975 4679999999999999986544322 223346788999999999999999999999999998 99
Q ss_pred HHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhhhhhc
Q 002927 524 GGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAA 603 (864)
Q Consensus 524 g~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 603 (864)
|.|||+++|++|.++++++||+||||++|.|.........+.+..|................. . .
T Consensus 157 g~iie~~tg~~~~~~~~e~i~~PLgm~~T~~~~~~~~~~~~~a~~y~~~~~~~~~~~~~~~~~------~---------~ 221 (362)
T d2drwa1 157 GMIIAHETGKPYSDHLRSRIFAPLGMKDTWVGTHETFPIEREARGYMHAAADDENPQWDVSGA------G---------D 221 (362)
T ss_dssp HHHHHHHHTSCHHHHHHHHTHHHHTCCSCEETTTCCCCGGGBCCCEEECBTTCCSCSSBCTTC------C---------C
T ss_pred cchhhhccCcchhhhhHHHHHhccCCccccccCccccccccccceeecccccccccccccccc------c---------C
Confidence 999999999999999999999999999986644334445566666643322211110000000 0 0
Q ss_pred cccccccc--ccccccccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 604 ITPAVFNM--LNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 604 ~~~~~~~~--~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
+....... ........|+||+++|++||+||++++++|++++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~aGgl~sta~Dla~~~~~ll~~~~l~~~ 267 (362)
T d2drwa1 222 PVDGVWDSTEWFPLSGANAAGDMVSTPRDIVKFLNALFDGRILDQK 267 (362)
T ss_dssp CBTTEEECTTTSCHHHHGGGTCEEECHHHHHHHHHHHHTTSSSCHH
T ss_pred ccccccccccccccccccccCceEcCHHHHHHHHHHHhCCCCCCHH
Confidence 00000111 111223458999999999999999999999988766
|
| >d1ci9a_ e.3.1.1 (A:) Esterase EstB {Burkholderia gladioli [TaxId: 28095]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Esterase EstB species: Burkholderia gladioli [TaxId: 28095]
Probab=100.00 E-value=1e-47 Score=429.74 Aligned_cols=271 Identities=24% Similarity=0.337 Sum_probs=205.7
Q ss_pred hHHHHHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCC
Q 002927 363 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 442 (864)
Q Consensus 363 ~~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ 442 (864)
.++.+++++++++.++++.+||++++|+++|++++++++|+++.+++.|++++|+|+|+|+||+||++++++|+|+|+|+
T Consensus 2 a~l~~~id~~~~~~~~~~~~pG~~~~V~~~g~~v~~~~~G~ad~~~~~~~~~~t~f~iaSvtK~~ta~~v~~Lve~G~l~ 81 (377)
T d1ci9a_ 2 ASLAARLDAVFDQALRERRLVGAVAIVARHGEILYRRAQGLADREAGRPMREDTLFRLASVTKPIVALAVLRLVARGELA 81 (377)
T ss_dssp HHHHHHHHHHHHHHHHTTSCSEEEEEEEETTEEEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHHTSSC
T ss_pred chHHHHHHHHHHHHHHhCCCCeEEEEEEECCEEEEEEeEEeeccccCCCCCCCCeEeeeehHHHHHHHHHHHHHHcCCcc
Confidence 35778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCchhhhcccCcc----CCCCccCHHhHhcCCCCCCCCCCCc----------cCCCCcCCCCHHHHHHHHHccCCCCCC
Q 002927 443 LEENIANIWPEFKS----NGKDLIKVHHVLNHTSGLHNVSVDL----------SSENPLLICDWDECLNRIALSAPETEP 508 (864)
Q Consensus 443 ld~~v~~ylP~~~~----~~~~~ITir~LLtHtSGl~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~~~~~~p 508 (864)
|||||++|||+|.. ..++.|||+|||+||||++++.... .........+.++.++.+...++.++|
T Consensus 82 ldd~v~~ylP~~~~~~~~~~~~~ITi~~Ll~htsGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 161 (377)
T d1ci9a_ 82 LDAPVTRWLPEFRPRLADGSEPLVTIHHLLTHTSGLGYWLLEGAGSVYDRLGISDGIDLRDFDLDENLRRLASAPLSFAP 161 (377)
T ss_dssp TTSBGGGTCTTCCCBCTTSCCCCCBHHHHHHTCSSCCCHHHHCTTSHHHHHTCCCSSSCCSSCHHHHHHHHHHSBCSSCT
T ss_pred ccccchhhhhhhhcccccccCCceehhhcccccccccccccccchhhhhhhccccccccccCCHHHHHHHHhhCCCcCCC
Confidence 99999999999864 2346799999999999998743211 111122346788999999999999999
Q ss_pred CCceecccCcHHHHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCC
Q 002927 509 GQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLR 588 (864)
Q Consensus 509 g~~~~Ysn~~~~~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~ 588 (864)
|+.|.||| +|. +||.|||+++|++|++|++++||+||||++|+|.. ++ ..+.+..|.......... ......+
T Consensus 162 G~~~~Ys~-~~~-lLg~iie~vtg~~~~~~~~e~i~~PLGm~~t~~~~-~~--~~~~a~~~~~~~~~~~~~--~~~~~~~ 234 (377)
T d1ci9a_ 162 GSGWQYSL-ALD-VLGAVVERATGQPLAAAVDALVAQPLGMRDCGFVS-AE--PERFAVPYHDGQPEPVRM--RDGIEVP 234 (377)
T ss_dssp TSCCCCCT-HHH-HHHHHHHHHHTSCHHHHHHHHTHHHHTCCSCBSCC-SC--GGGBCCCEECCSSSCEEC--CTTEEEE
T ss_pred CceEeeCc-HHH-HHHHHHhhcccchhhhhhhHHHhhccCCccccccC-Ch--hhhhhccccccCCccccc--ccccccc
Confidence 99999996 687 99999999999999999999999999999997642 22 234555554322111000 0000000
Q ss_pred CCCCCCcchhhhhhcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 589 LPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
.+...... ................|+||++||++||+||+++|++++.+.++
T Consensus 235 ~~~~~~~~-------~~~~~~~~~~~~~~~~g~gGl~sta~Dlarf~~~l~~~~~~~~~ 286 (377)
T d1ci9a_ 235 LPEGHGAA-------VRFAPSRVFEPGAYPSGGAGMYGSADDVLRALEAIRANPGFLPE 286 (377)
T ss_dssp CCTTSCSE-------EEECGGGGGCTTSCCCTTTCCEECHHHHHHHHHHHHHCSSSSCH
T ss_pred cccccccc-------cccCccccccccccccCCccccccHHHHHHHHHHhhhccCCCcH
Confidence 00000000 00000011112223457889999999999999999998877655
|
| >d1yqsa1 e.3.1.1 (A:3-347) D-ala carboxypeptidase/transpeptidase {Streptomyces sp., R61 [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-ala carboxypeptidase/transpeptidase species: Streptomyces sp., R61 [TaxId: 1931]
Probab=100.00 E-value=1.5e-47 Score=423.46 Aligned_cols=325 Identities=21% Similarity=0.305 Sum_probs=251.5
Q ss_pred HHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCc
Q 002927 367 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEEN 446 (864)
Q Consensus 367 ~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~ 446 (864)
..+++++++.+++ .+||++++|+++|+ ++..++|+++.+.+++++++|+|+|||+||+||++++++|+|+|+|+||+|
T Consensus 7 ~~l~~~~~~~~~~-~~pG~~v~v~~~g~-~~~~~~G~~d~~~~~~~t~~t~f~i~SvsK~~ta~~i~~lv~~G~l~ldd~ 84 (345)
T d1yqsa1 7 TGLQAVLHTALSQ-GAPGAMVRVDDNGT-IHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGKLDLDAS 84 (345)
T ss_dssp HHHHHHHHHHHHT-TCSEEEEEEEETTE-EEEEEEEBSCTTTCCBCCTTCBEECGGGHHHHHHHHHHHHHHTTSCCTTSB
T ss_pred HHHHHHHHHHHHC-CCCeEEEEEEECCE-EEEEeEEEEeccCCCCCCCCCEEEchhhhHHHHHHHHHHHHHhhccccccc
Confidence 5577777777765 48999999988887 578899999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCccCCCCccCHHhHhcCCCCCCCCCCCccC-------CCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcH
Q 002927 447 IANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSS-------ENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSF 519 (864)
Q Consensus 447 v~~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~~ 519 (864)
|++|||++.. .++|||+|||+||||++++...... .......+.+++++.+...++.++||+.|.|||.+|
T Consensus 85 v~~~lp~~~~--~~~iTi~~LL~htSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~Ysn~~~ 162 (345)
T d1yqsa1 85 VNTYLPGLLP--DDRITVRQVMSHRSGLYDYTNDMFAQTVPGFESVRNKVFSYQDLITLSLKHGVTNAPGAAYSYSNTNF 162 (345)
T ss_dssp HHHHSTTCSS--CTTCBHHHHHTTCSCCCCTHHHHTSSHHHHHHHHTTCCCCHHHHHHHHHTSCCSSSTTSCCCCCHHHH
T ss_pred hhhcccccCC--cceEEeeeeccccCCCCcccccchhhccccccccccccCCHHHHHHHHHhcCccCCCCcccccCCccc
Confidence 9999999965 4679999999999999876432211 111234678899999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhh
Q 002927 520 GWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKIS 599 (864)
Q Consensus 520 ~~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 599 (864)
. |||.|||++||++|+++++++||+||||++|.|...........+..|..........
T Consensus 163 ~-lLg~iie~vtg~~~~~~~~e~i~~PLgm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------- 221 (345)
T d1yqsa1 163 V-VAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLTPDEAGGAL-------------------- 221 (345)
T ss_dssp H-HHHHHHHHHHSSCHHHHHHHHTTTTTTCTTCBCCTTCCCCCSSBCCCEECCSSTTCCC--------------------
T ss_pred c-ccchhhhhccccchHHHHHHHHhhccCCcceeccCchhhhcccccccccccccccccc--------------------
Confidence 8 9999999999999999999999999999999775444333344444443221110000
Q ss_pred hhhcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccchhH
Q 002927 600 QLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTKK 679 (864)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (864)
............|+||++||++||+||++++++|+.++++
T Consensus 222 --------~~~~~~~~~~~~~aGgl~st~~Dla~~~~~l~~~~~l~~~-------------------------------- 261 (345)
T d1yqsa1 222 --------VDSTEQTVSWAQSAGAVISSTQDLDTFFSALMSGQLMSAA-------------------------------- 261 (345)
T ss_dssp --------EECCCCCCTTTGGGTCCEECHHHHHHHHHHHHTTCSSCHH--------------------------------
T ss_pred --------cccccccccccCCCcccccCHHHHHHHHHHhhcCCCCCHH--------------------------------
Confidence 0000111123458899999999999999999998877655
Q ss_pred HHHHHHhhcCCCCCCCccccccCCCCccccccCccchhhhhccccCCCCCCCccCCCCCCCCCCcccccccCCccccccc
Q 002927 680 ELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAF 759 (864)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (864)
.+++|. .|..
T Consensus 262 -~~~~~~----------------------------~~~~----------------------------------------- 271 (345)
T d1yqsa1 262 -QLAQMQ----------------------------QWTT----------------------------------------- 271 (345)
T ss_dssp -HHHHHT----------------------------CCEE-----------------------------------------
T ss_pred -HHHHHh----------------------------hccc-----------------------------------------
Confidence 444441 0000
Q ss_pred ccCCCCCCCCCCCCccccCccccCCCCCCccccccCC-CCCc--ccccccCCCeEEEEEecccCCCcchHHHHHHHHHHh
Q 002927 760 LGVGDYGDLALPNGRFGLGFKRYNTRDGSYIGFGHSG-MGGS--TGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSEL 836 (864)
Q Consensus 760 ~~~g~~~~~~~~~~~~glG~~~~~~~~~~~~~~gh~G-~~G~--~~~~~P~~~~~vv~~~N~~~~~~~~~~~~~~~~~~l 836 (864)
.....+||+||++.... .+...++|+| .+|+ +++++|+++++||+++|.....+..+.+.+.+.+++
T Consensus 272 ---------~~~~~~yG~G~~~~~~~-~g~~~~~H~G~~~G~~s~~~~~p~~~~~iv~l~N~~~~~~~~~~~~~~l~~~~ 341 (345)
T d1yqsa1 272 ---------VNSTQGYGLGLRRRDLS-CGISVYGHTGTVQGYYTYAFASKDGKRSVTALANTSNNVNVLNTMARTLESAF 341 (345)
T ss_dssp ---------EETTEEECSSCEEEECT-TSCEEEEEEEEETTEEEEEEECTTSSEEEEEEESEESCHHHHHHHHHHHHHHH
T ss_pred ---------CCCCCceeEEEEeeccC-CCceEEEecCccCCceEEEEEEEcCCEEEEEEEeCCCChHHHHHHHHHHHHHh
Confidence 00224799999986533 3456799999 6664 459999999999999998766666778888888877
|
| >d1onha_ e.3.1.1 (A:) AMPC beta-Lactamase, class C {Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: AMPC beta-Lactamase, class C species: Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]
Probab=100.00 E-value=1.6e-47 Score=426.18 Aligned_cols=244 Identities=20% Similarity=0.281 Sum_probs=208.9
Q ss_pred hHHHHHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCC
Q 002927 363 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 442 (864)
Q Consensus 363 ~~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ 442 (864)
.++.+.+++.++++++++.+||++|+|+++|++++. +||+++.+++.|+++||+|+|||+||+|||+++++|+|+|+|+
T Consensus 5 ~~l~~~v~~~i~~~~~~~~~pG~~v~V~~~g~~~~~-~~G~~~~~~~~p~~~dT~f~iaSitK~~ta~~i~~L~e~G~l~ 83 (363)
T d1onha_ 5 KQLAEVVANTVTPLMKAQSVPGMAVAVIYQGKPHYY-TFGKADIAANKPVTPQTLFELGSISKTFTGVLGGDAIARGEIS 83 (363)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEEEETTEEEEE-EEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEEEECCEEEEE-eEEecccCCCCCCCCCCEEEeeehHHHHHHHHHHHHHhcCcce
Confidence 467788999999999999999999999999999985 7899999999999999999999999999999999999999999
Q ss_pred ccCchhhhcccCccCCCCccCHHhHhcCCCCCCCCCCCccCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHH
Q 002927 443 LEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWL 522 (864)
Q Consensus 443 ld~~v~~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~l 522 (864)
||+||++|+|+|...++++|||+|||+||||+..+.. +....+.+++++.+.+.++.++||+.|.|||.+|. |
T Consensus 84 lddpv~~ylp~~~~~~~~~ITi~~LL~HtSGl~~~~~------~~~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~~~-l 156 (363)
T d1onha_ 84 LDDPVTRYWPQLTGKQWQGIRMLDLATYTAGGLPLQV------PDEVTDNASLLRFYQNWQPQWKPGTTRLYANASIG-L 156 (363)
T ss_dssp TTSBGGGTCTTCCCGGGTTCBHHHHHHTCSSCCCSSC------CTTCCSHHHHHHHHHHCCCSSCTTSEECCCHHHHH-H
T ss_pred eeeccchhhhhcccccccccchhhHhhccccCccccC------ccccCCHHHHHHHHHHhhhhcCCceeeecccccee-h
Confidence 9999999999998877889999999999999765432 22356888999999999999999999999999998 9
Q ss_pred HHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhhhhh
Q 002927 523 CGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLA 602 (864)
Q Consensus 523 Lg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 602 (864)
||.|||+++|++|+++++++||+||||++|++. .+.....+.+..|.......... ..|
T Consensus 157 lg~iie~~tg~~~~~~~~e~i~~PLgm~~t~~~-~~~~~~~~~a~~~~~~~~~~~~~---~~~----------------- 215 (363)
T d1onha_ 157 FGALAVKPSGMPYEQAMTTRVLKPLKLDHTWIN-VPKAEEAHYAWGYRDGKAVRAVR---VSP----------------- 215 (363)
T ss_dssp HHHHHTGGGTSCHHHHHHHHTTTTTTCTTEESS-CCGGGGGGBCCEEETTEEECCCC---CCS-----------------
T ss_pred hhhhhhhhcCCChhhhhHHHHHhhcCccccccc-CCcccccceeeeeecCCccccee---eec-----------------
Confidence 999999999999999999999999999998653 55556667777775332211110 000
Q ss_pred cccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 603 AITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
.....++||++||++||+||++++++++.+.+.
T Consensus 216 ------------~~~~~~aggl~st~~Dla~~~~~~l~~~~~~~~ 248 (363)
T d1onha_ 216 ------------GMLDAQAYGVKTNVQDMANWVMANMAPENVADA 248 (363)
T ss_dssp ------------STTHHHHHCCEECHHHHHHHHHHHHCGGGCCSH
T ss_pred ------------ccccccccceeeCHHHHHHHHHHhhcCCCCCch
Confidence 011237899999999999999999999887766
|
| >d1ei5a3 e.3.1.1 (A:3-335) D-aminopeptidase, N-terminal domain {Ochrobactrum anthropi [TaxId: 529]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-aminopeptidase, N-terminal domain species: Ochrobactrum anthropi [TaxId: 529]
Probab=100.00 E-value=2.5e-47 Score=419.53 Aligned_cols=322 Identities=19% Similarity=0.229 Sum_probs=243.6
Q ss_pred HHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCc
Q 002927 367 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEEN 446 (864)
Q Consensus 367 ~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~ 446 (864)
+++++++++.++++.+||++|+|+++|+++++++||+++...+.|++++|+|+|||+||+|||+++++|+|+|+| ||+|
T Consensus 5 ~~l~~~~~~~~~~~~~PG~sv~V~~~g~~v~~~~~G~~d~~~~~~~~~dt~f~i~SvsK~~ta~~v~~lv~~G~l-ldd~ 83 (333)
T d1ei5a3 5 SALEAFVRHIPQNYKGPGGVVAVVKDGEVVLQHAWGFADLRTRTPMTLDTRMPICSVSKQFTCAVLLDAVGEPEL-LDDA 83 (333)
T ss_dssp HHHHHHHHTHHHHSCSSEEEEEEEETTEEEEEEEEEEEETTTTEECCTTCCEECGGGHHHHHHHHHHHHTCSGGG-GHHH
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEEECCEEEEEEeEeeeccccCCCCCCCCEEeeeehHHHHHHHHHHHHHhcCCC-ccch
Confidence 567889999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred hhhhcccCccCCCCccCHHhHhcCCCCCCCCCCCc--cCCCCcCCCCHHHHHHHHHcc-CCCCCCCCceecccCcHHHHH
Q 002927 447 IANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDL--SSENPLLICDWDECLNRIALS-APETEPGQEQLYHYLSFGWLC 523 (864)
Q Consensus 447 v~~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~--~~~~~~~~~~~~~~~~~l~~~-~~~~~pg~~~~Ysn~~~~~lL 523 (864)
|.+|+|++. .++|||+|||+|||||+++.... ....+.......+....+... ++.++||+.|.|||.+|. ||
T Consensus 84 v~~~lp~~~---~~~iTi~~LL~htSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~Ysn~~~~-lL 159 (333)
T d1ei5a3 84 LEAYLDKFE---DERPAVRDLCNNQSGLRDYWALSVLCGADPEGVFLPAQAQSLLRRLKTTHFEPGSHYSYCNGNFR-IL 159 (333)
T ss_dssp HHHHTTTCC---SCCCCHHHHHTTCSCCCCHHHHHHHTTCCTTCCBCHHHHHHHHHTCCCCSSCTTSSCCCCHHHHH-HH
T ss_pred hhhhccccc---hhhhhhccccccCCCCcccccccccccccccccchhhhHHHHHHhcCCCcCCCCceeecccchhH-HH
Confidence 999999986 36799999999999998753221 112233345556666666654 457899999999999998 99
Q ss_pred HHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhhhhhc
Q 002927 524 GGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAA 603 (864)
Q Consensus 524 g~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 603 (864)
|.|||+++|++|+++++++||+||||++|.|. ++....+.+..|.........+
T Consensus 160 g~iie~~tg~~~~~~~~~~i~~PLgm~~t~~~--~~~~~~~~~~~~~~~~~~~~~~------------------------ 213 (333)
T d1ei5a3 160 ADLIEAHTGRTLVDILSERIFAPAGMKRAELI--SDTALFDECTGYEGDTVRGFLP------------------------ 213 (333)
T ss_dssp HHHHHHHHTSCHHHHHHHHTHHHHTCTTCEEC--CBGGGCCSSCCEEEETTTEEEE------------------------
T ss_pred HHhhhhhcCCccchhhhhhhcCccCccceecc--Cchhhccccccccccccccccc------------------------
Confidence 99999999999999999999999999999763 2222333344432222111111
Q ss_pred ccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccchhHHHHH
Q 002927 604 ITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTKKELLA 683 (864)
Q Consensus 604 ~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (864)
..+.....|+||+++|++||+||+++|.++..++.. .++
T Consensus 214 --------~~~~~~~~gaggl~sta~Dla~~~~~l~~~~~~~~~---------------------------------~~~ 252 (333)
T d1ei5a3 214 --------ATNRIQWMGDAGICASLNDMIAWEQFIDATRDDESG---------------------------------LYR 252 (333)
T ss_dssp --------CCCCBBCCSSSCEEECHHHHHHHHHHHHHTTTCTTS---------------------------------HHH
T ss_pred --------ccccccccccCceeecHHHHHHHHHHhhcCCCCcHH---------------------------------Hhh
Confidence 112233468999999999999999999887766655 333
Q ss_pred HHhhcCCCCCCCccccccCCCCccccccCccchhhhhccccCCCCCCCccCCCCCCCCCCcccccccCCcccccccccCC
Q 002927 684 ALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVG 763 (864)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 763 (864)
+| .++.+ +.+ +
T Consensus 253 ~~----------------------------------~~~~~-------------------------~~~----------~ 263 (333)
T d1ei5a3 253 RL----------------------------------SGPQT-------------------------FKD----------G 263 (333)
T ss_dssp HH----------------------------------SSCCB-------------------------CTT----------S
T ss_pred hh----------------------------------ccccc-------------------------ccc----------c
Confidence 33 11110 000 0
Q ss_pred CCCCCCCCCCccccCccccCCCCCCccccccCC-CCCc--ccccccCCCeEEEEEecccCCCcchHHHHHHHHHHhCCCC
Q 002927 764 DYGDLALPNGRFGLGFKRYNTRDGSYIGFGHSG-MGGS--TGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSELNLPV 840 (864)
Q Consensus 764 ~~~~~~~~~~~~glG~~~~~~~~~~~~~~gh~G-~~G~--~~~~~P~~~~~vv~~~N~~~~~~~~~~~~~~~~~~l~~p~ 840 (864)
....||+||++.. ..+..++||+| .+|+ .++++|+.+++||+++|... +......+++...+|++.
T Consensus 264 -------~~~~yG~G~~~~~--~~g~~~~gH~G~~~G~~s~~~~~p~~~~~vvvltN~~~--~~~~~~~~l~~~~~g~~~ 332 (333)
T d1ei5a3 264 -------VAAPYGFGLNLHE--TGGKRLTGHGGALRGWRCQRWHCADERLSTIAMFNFEG--GASEVAFKLMNIALGVSS 332 (333)
T ss_dssp -------CBCSEETTEEEEE--ETTEEEEEEEEEETTEEEEEEEEGGGTEEEEEEESBSS--CHHHHHHHHHHHHHTCCC
T ss_pred -------ccCceeeeeEEee--cCCeeEEEeCCcCCCceEEEEEEecCCeEEEEEEeCCC--CHHHHHHHHHHHHcCCCC
Confidence 1247999999866 44567899999 5554 45889999999999999753 333334445555557763
|
| >d2hdsa1 e.3.1.1 (A:4-361) AMPC beta-Lactamase, class C {Escherichia coli, cephalosporinase [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: AMPC beta-Lactamase, class C species: Escherichia coli, cephalosporinase [TaxId: 562]
Probab=100.00 E-value=2.3e-47 Score=423.96 Aligned_cols=241 Identities=21% Similarity=0.286 Sum_probs=207.4
Q ss_pred hHHHHHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCC
Q 002927 363 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 442 (864)
Q Consensus 363 ~~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ 442 (864)
+.+.+.++++++++++++.+||++|+|+++|++++. +||+++...+.|+++||+|+|||+||+||++++++|+|+|+|+
T Consensus 3 ~~~~~~v~~~i~~~~~~~~ipG~~v~v~~~g~~~~~-~~G~~~~~~~~~~~~dt~f~iaS~tK~~ta~~i~~lv~~G~l~ 81 (358)
T d2hdsa1 3 QQINDIVHRTITPLIEQQKIPGMAVAVIYQGKPYYF-TWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIK 81 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEEEETTEEEEE-EEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEEEECCEEEEE-eEEeeccccCCCCCCCCEEeccchHHHHHHHHHHHHHhcCCcc
Confidence 467788999999999999999999999999999985 6999999999999999999999999999999999999999999
Q ss_pred ccCchhhhcccCccCCCCccCHHhHhcCCCCCCCCCCCccCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHH
Q 002927 443 LEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWL 522 (864)
Q Consensus 443 ld~~v~~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn~~~~~l 522 (864)
||+||++|+|++...++++|||||||+||||+..+.. +....+.+++++.+...++.++||+.|.|||.+|. |
T Consensus 82 ld~~v~~ylp~~~~~~~~~iTir~LLshtsG~~~~~~------~~~~~~~~~~~~~~~~~~~~~~pG~~~~Ysn~~~~-l 154 (358)
T d2hdsa1 82 LSDPTTKYWPELTAKQWNGITLLHLATYTAGGLPLQV------PDEVKSSSDLLRFYQNWQPAWAPGTQRLYANSSIG-L 154 (358)
T ss_dssp TTSBHHHHCTTCCCGGGTTCBHHHHHHTCSSCCCSSC------CTTCCSHHHHHHHHHHCCCSSCTTSEECCCHHHHH-H
T ss_pred cchhhhhhcccccccccchhhhhhhcccCcCCCchhh------cccccccHHHHHHHhhCccccCCCceeEecccccc-c
Confidence 9999999999998877889999999999999876432 23356888999999999999999999999999999 9
Q ss_pred HHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcchhhhhh
Q 002927 523 CGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLA 602 (864)
Q Consensus 523 Lg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 602 (864)
||.|||++||++|.++++++||+||||++|.| ..++....+.+..+......... +
T Consensus 155 lg~iie~~tg~~~~~~~~~~i~~PLgm~~T~~-~~~~~~~~~~~~~~~~~~~~~~~------~----------------- 210 (358)
T d2hdsa1 155 FGALAVKPSGLSFEQAMQTRVFQPLKLNHTWI-NVPPAEEKNYAWGYREGKAVHVS------P----------------- 210 (358)
T ss_dssp HHHHHTGGGTSCHHHHHHHHTTTTTTCTTEES-SCCGGGGGGBCCEEETTEEECCC------C-----------------
T ss_pred cchhhhcccCCChhhhhhhHHHhhcCcccccC-CCChhHhcccccccccCcccccc------c-----------------
Confidence 99999999999999999999999999999855 34555555555555332211100 0
Q ss_pred cccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCC
Q 002927 603 AITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 647 (864)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~ 647 (864)
.....++||++||++||+||++++++++.++++
T Consensus 211 ------------~~~~~~aggl~st~~Dla~f~~~~l~~~~~~~~ 243 (358)
T d2hdsa1 211 ------------GALDAEAYGVKSTIEDMARWVQSNLKPLDINEK 243 (358)
T ss_dssp ------------CTTHHHHTCCEECHHHHHHHHHHHHCGGGCSSH
T ss_pred ------------ccccCCCcceecCHHHHHHHHHHHhCCCCCChH
Confidence 012237899999999999999999999988776
|
| >d2dcfa1 e.3.1.1 (A:5-392) 6-aminohexanoate-dimer hydrolase NylC {Flavobacterium sp. [TaxId: 239]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: 6-aminohexanoate-dimer hydrolase NylC species: Flavobacterium sp. [TaxId: 239]
Probab=100.00 E-value=8.8e-39 Score=357.64 Aligned_cols=300 Identities=17% Similarity=0.166 Sum_probs=216.0
Q ss_pred HHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 369 LRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 369 l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
++++++ +..+.| ++|+++|++|+++++| .++++|+|.++|+||+||++++++|+|+|+|++|+||.
T Consensus 69 l~~~l~----~~~t~a--~lV~~~G~iv~E~y~~--------~~~~~t~~~~~SvtKs~ta~li~~lve~G~l~ldd~v~ 134 (388)
T d2dcfa1 69 LEQRLE----QTYTDA--FLVLRGTEVVAEYYRA--------GFAPDDRHLLMAVSKSLCGTVVGALVDEGRIDPAQPVT 134 (388)
T ss_dssp HHHHHH----HTTEEE--EEEEETTEEEEEEECT--------TCCTTCCEECTTHHHHHHHHHHHHHHHTTSCCTTSBGG
T ss_pred HHHHHH----hcCCcE--EEEEECCEEEEEEecC--------CCCcccchhHHHHHHHHHHHHHHHHHhcCcccccCccc
Confidence 455554 344444 6778999999998875 46899999999999999999999999999999999999
Q ss_pred hhcccCccCCCCccCHHhHhcCCCCCCCCCCCccC------------CCCcCCCCHHHHHHHHHccCCCCCCCCceeccc
Q 002927 449 NIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSS------------ENPLLICDWDECLNRIALSAPETEPGQEQLYHY 516 (864)
Q Consensus 449 ~ylP~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~------------~~~~~~~~~~~~~~~l~~~~~~~~pg~~~~Ysn 516 (864)
+|+|+|+...+++|||+|||+||||++........ ..+.......+....+...+.. .||+.|.|+|
T Consensus 135 ~ylPe~~~~~~~~iTi~~LL~mtsGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~pg~~f~Y~~ 213 (388)
T d2dcfa1 135 EYVPELAGSVYDGPSVLQVLDMQISIDYNEDYVDPASEVQTHDRSAGWRTRRHGDPADTYEFLTTLRGD-GSTGEFQYCS 213 (388)
T ss_dssp GTCGGGTTSTTSSCBHHHHHTTCBCCSCCCCSSCTTSHHHHHHHHHTSSCCCTTCCSSHHHHHHTCCCC-SCBSSCCCCH
T ss_pred ccchhhcccccchhhHHHhhhcccCCccccccccccchhhhhhhhhhcccccccchHHHHHHHhccCcC-CCCCEEEEec
Confidence 99999998888999999999999999864332110 0111122333455555555544 5666799999
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHHHHhhhccCCCCccCCCCCCCccccccceeccCCcccccccCCCCCCCCCCCCCCcc
Q 002927 517 LSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPD 596 (864)
Q Consensus 517 ~~~~~lLg~iie~vtG~~~~~~~~~~if~PLgm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 596 (864)
.++. +||.|||++||+++.+|++++||+||||+++.|.....
T Consensus 214 ~~~~-lLg~iie~~tG~~~~~~~~e~i~~PlGm~~~~~~~~~~------------------------------------- 255 (388)
T d2dcfa1 214 ANTD-VLAWIVERVTGLRYVEALSTYLWAKLDADRDATITVDT------------------------------------- 255 (388)
T ss_dssp HHHH-HHHHHHHHHHCSCHHHHHHHHTGGGTTCSSCCEECBCT-------------------------------------
T ss_pred CCHH-HHHHHHHHhcCccchhhhhhhccCcccccccccccccc-------------------------------------
Confidence 9998 99999999999999999999999999999875531110
Q ss_pred hhhhhhcccccccccccccccccCCcceecCHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccc
Q 002927 597 KISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKG 676 (864)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlakf~~~ll~gg~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (864)
.....++||+++|++||+||+++++++|.+.++| +.
T Consensus 256 ------------------~g~~~~~ggl~~tarDlarfg~l~l~~G~~~g~q----------------il---------- 291 (388)
T d2dcfa1 256 ------------------TGFGFANGGVSCTARDLARVGRMMLDGGVAPGGR----------------VV---------- 291 (388)
T ss_dssp ------------------TCCBCTTTCEEECHHHHHHHHHHHHTTTEETTEE----------------CS----------
T ss_pred ------------------cCcccccchhhhcccchhHHHHHHHhCCccCCcc----------------cc----------
Confidence 0122478999999999999999999999998874 11
Q ss_pred hhHHHHHHHhhcCCCCCCCccccccCCCCccccccCccchhhhhccccCCCCCCCccCCCCCCCCCCcccccccCCcccc
Q 002927 677 TKKELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIH 756 (864)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 756 (864)
+++.+++|. ++... ....+...
T Consensus 292 -s~~~i~~~~----------------------------------~~~~~----------------------~~~~~~~~- 313 (388)
T d2dcfa1 292 -SEDWVRRVL----------------------------------AGGSH----------------------EAMTDKGF- 313 (388)
T ss_dssp -CHHHHHHHH----------------------------------HCCCT----------------------TTCCCHHH-
T ss_pred -hHHHHHHHh----------------------------------cCCCc----------------------cccccccc-
Confidence 112333331 11100 00000000
Q ss_pred cccccCCCCCCCCCCCCccccCccccCCCCCCccccccCCCCCcccccccCCCeEEEEEecccCCCc-----chHHHHHH
Q 002927 757 DAFLGVGDYGDLALPNGRFGLGFKRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGA-----TTGRIIHF 831 (864)
Q Consensus 757 ~~~~~~g~~~~~~~~~~~~glG~~~~~~~~~~~~~~gh~G~~G~~~~~~P~~~~~vv~~~N~~~~~~-----~~~~~~~~ 831 (864)
....+..+||++||..... ...|.|.|++|+++|++|+++++||+++|...+.. ....+++.
T Consensus 314 ----------~~~~~~~~Yg~~ww~~~~~---~~~~~~~G~~GQ~i~vdP~~~lvIV~ls~~~~~~~~~~~~~~~~i~~~ 380 (388)
T d2dcfa1 314 ----------TNTFPDGSYTRQWWCTGNE---RGNVSGIGIHGQNLWLDPLTDSVIVKLSSWPDPDTEHWHRLQNGILLD 380 (388)
T ss_dssp ----------HHHCTTCEEETTEEECCCT---TCCEEEEETTTEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHH
T ss_pred ----------ccCCCCCCCCcceeecCCC---CCcEEEECCCCcEEEEEecCCEEEEEeCCCCCCCchhHHHHHHHHHHH
Confidence 0001345899999886532 33589999999999999999999999999754322 14445556
Q ss_pred HHHHh
Q 002927 832 VCSEL 836 (864)
Q Consensus 832 ~~~~l 836 (864)
|.++|
T Consensus 381 i~~~l 385 (388)
T d2dcfa1 381 VSRAL 385 (388)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 66655
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.79 E-value=6.7e-20 Score=183.21 Aligned_cols=152 Identities=17% Similarity=0.225 Sum_probs=101.0
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
++||+|++|+||+|+..+|++||||+.+++...... .+..+. . ...... . ........|.+
T Consensus 6 ~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~--~~~~~~------~--~~~~~~---~------~~~~~~~~e~~ 66 (191)
T d1zara2 6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKK--VKEKRD------Y--GDLHFS---V------LAIRSARNEFR 66 (191)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC------C--CCC---------------CHH---H------HHHHHHHHHHH
T ss_pred CEeeeCcceEEEEEECCCCCEEEEEEEecccchhhh--hhhhhh------h--ccHHHH---H------HHHHHHHHHHH
Confidence 689999999999999889999999999987543100 000000 0 000000 0 11122345666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 170 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~l~~i~ 170 (864)
++.++. .+.+|+.+.....+|+|||++|..+.++. ......++..+++. +.++|
T Consensus 67 ~l~~l~--------------------~~~v~~~~~~~~~~lvme~~~~~~~~~l~-----~~~~~~i~~ql~~~-l~~lH 120 (191)
T d1zara2 67 ALQKLQ--------------------GLAVPKVYAWEGNAVLMELIDAKELYRVR-----VENPDEVLDMILEE-VAKFY 120 (191)
T ss_dssp HHHHTT--------------------TSSSCCEEEEETTEEEEECCCCEEGGGCC-----CSCHHHHHHHHHHH-HHHHH
T ss_pred HHHHcc--------------------CCCcceEEEecCCEEEEEeeccccccchh-----hHHHHHHHHHHHHH-HHHHh
Confidence 666653 23467777666779999999998765532 12345666666655 77899
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEecccccccChHHH
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 210 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 210 (864)
+.||+|||+||+|||+++ +.++|||||++...+....
T Consensus 121 ~~giiHrDiKP~NILv~~---~~~~liDFG~a~~~~~~~~ 157 (191)
T d1zara2 121 HRGIVHGDLSQYNVLVSE---EGIWIIDFPQSVEVGEEGW 157 (191)
T ss_dssp HTTEECSCCSTTSEEEET---TEEEECCCTTCEETTSTTH
T ss_pred hCCEEEccCChhheeeeC---CCEEEEECCCcccCCCCCc
Confidence 999999999999999984 4699999999988875443
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=99.72 E-value=2.4e-18 Score=188.25 Aligned_cols=151 Identities=21% Similarity=0.295 Sum_probs=106.9
Q ss_pred cccccccc-cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhH
Q 002927 3 GMFMDFVE-TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 80 (864)
Q Consensus 3 ~~F~~fd~-~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~ 80 (864)
.+|+.|+- +.||+|+||.||+|+.+ +|+.||||+.+...... .+
T Consensus 26 ~~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~----~~------------------------------ 71 (352)
T d1koba_ 26 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD----KY------------------------------ 71 (352)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHH----HH------------------------------
T ss_pred CcccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhH----HH------------------------------
Confidence 34555553 78999999999999975 89999999876543211 00
Q ss_pred hhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHH
Q 002927 81 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 158 (864)
Q Consensus 81 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~ 158 (864)
.+.+|++.+.++.| +. +.+-.++. ....+|||||++|++|.+........++..++.
T Consensus 72 ---~~~~Ei~il~~l~H------------------pnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~ 130 (352)
T d1koba_ 72 ---TVKNEISIMNQLHH------------------PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVI 130 (352)
T ss_dssp ---HHHHHHHHHTTCCS------------------TTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHH
T ss_pred ---HHHHHHHHHHhCCC------------------CCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHH
Confidence 13346655555422 11 22223333 456789999999999977543333356777776
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
..+.+++ +..+|+.||+|||+||+|||++...+++++|+|||+++.+.+.
T Consensus 131 ~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~ 182 (352)
T d1koba_ 131 NYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD 182 (352)
T ss_dssp HHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred HHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCC
Confidence 6666655 8899999999999999999998544589999999999887643
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=4.1e-18 Score=184.23 Aligned_cols=151 Identities=16% Similarity=0.248 Sum_probs=109.5
Q ss_pred ccccccccc-cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHh
Q 002927 2 GGMFMDFVE-TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 79 (864)
Q Consensus 2 ~~~F~~fd~-~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~ 79 (864)
.|+|+.+.- +.||+|+||+||+|+.+ +|+.||||+.+..-.+.
T Consensus 1 ~~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~----------------------------------- 45 (321)
T d1tkia_ 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQ----------------------------------- 45 (321)
T ss_dssp CCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHH-----------------------------------
T ss_pred CCCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccH-----------------------------------
Confidence 367877663 78999999999999986 79999999987543211
Q ss_pred HhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHH
Q 002927 80 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 158 (864)
Q Consensus 80 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~ 158 (864)
..+.+|.+.+.+++|. .-+.+-.++. ....+|||||++|.+|.+........++..++.
T Consensus 46 ---~~~~~Ei~il~~l~Hp-----------------nIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~ 105 (321)
T d1tkia_ 46 ---VLVKKEISILNIARHR-----------------NILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIV 105 (321)
T ss_dssp ---HHHHHHHHHHHHSCCT-----------------TBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHH
T ss_pred ---HHHHHHHHHHHhCCCC-----------------CCCeEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHH
Confidence 0133466555554321 1233334444 567899999999999987654333346777776
Q ss_pred HHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 159 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 159 ~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+.+++ +..+|+.|++|||+||.|||++.++.++++|+|||++..+..
T Consensus 106 ~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~ 156 (321)
T d1tkia_ 106 SYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp HHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred HHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhcccc
Confidence 6666655 889999999999999999999865457899999999887654
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=2.8e-18 Score=182.58 Aligned_cols=141 Identities=15% Similarity=0.154 Sum_probs=103.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+....+. --.|.+|+
T Consensus 18 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~-------------------------------------~~~~~~E~ 60 (288)
T d2jfla1 18 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE-------------------------------------LEDYMVEI 60 (288)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGG-------------------------------------GGGTHHHH
T ss_pred EEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHH-------------------------------------HHHHHHHH
Confidence 56999999999999976 89999999976432111 01245677
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++++ ++ +.+-.++. ....+|||||++|++|.++.......++...+...+.+++
T Consensus 61 ~il~~l~H------------------pnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~g 122 (288)
T d2jfla1 61 DILASCDH------------------PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA 122 (288)
T ss_dssp HHHHHCCC------------------TTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------CCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 76666532 22 22333333 5667899999999999887543344567766666555555
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|+.||+|||+||+|||++.+ |+++|+|||+++.+...
T Consensus 123 L~ylH~~~ivHrDiKp~NIll~~~--~~~Kl~DFG~a~~~~~~ 163 (288)
T d2jfla1 123 LNYLHDNKIIHRDLKAGNILFTLD--GDIKLADFGVSAKNTRT 163 (288)
T ss_dssp HHHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECHHH
T ss_pred HHHHHHCCEEEeecChhheeECCC--CCEEEEechhhhccCCC
Confidence 888999999999999999999865 89999999999876543
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=6.4e-18 Score=180.10 Aligned_cols=139 Identities=15% Similarity=0.182 Sum_probs=101.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+..-... . + .+.+|+
T Consensus 26 ~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~-----------------------~--------~------~~~~E~ 68 (293)
T d1yhwa1 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-----------------------K--------E------LIINEI 68 (293)
T ss_dssp EECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSC-----------------------H--------H------HHHHHH
T ss_pred EEEecCcCcEEEEEEECCCCCEEEEEEEecccChH-----------------------H--------H------HHHHHH
Confidence 56999999999999975 89999999865321100 0 0 144566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.++++.| ++ +.+-.++. ....+|||||++|++|.++. ...+++...+...+.+++
T Consensus 69 ~il~~l~H------------------pnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~--~~~~l~~~~~~~i~~qi~~a 128 (293)
T d1yhwa1 69 LVMRENKN------------------PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQA 128 (293)
T ss_dssp HHHHHCCC------------------TTBCCEEEEEEETTEEEEEEECCTTCBHHHHH--HHSCCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------CCEeeEeEEEEECCEEEEEEEecCCCcHHHHh--hccCCCHHHHHHHHHHHHHH
Confidence 66555432 22 22222222 55678999999999998764 345677777666666655
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|+.|++|||+||+|||++.+ |+++|+|||+++.+...
T Consensus 129 L~yLH~~~iiHrDiKp~NILl~~~--~~vkl~DFG~a~~~~~~ 169 (293)
T d1yhwa1 129 LEFLHSNQVIHRDIKSDNILLGMD--GSVKLTDFGFCAQITPE 169 (293)
T ss_dssp HHHHHHTTEECCCCSGGGEEECTT--CCEEECCCTTCEECCST
T ss_pred HHHHHHCCCcccCCcHHHeEECCC--CcEeeccchhheeeccc
Confidence 889999999999999999999865 89999999999887543
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=99.70 E-value=8.2e-18 Score=183.84 Aligned_cols=144 Identities=22% Similarity=0.320 Sum_probs=105.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||+||+|+.+ +|+.||||+....... +.+ .+.+|+
T Consensus 32 ~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~----~~~---------------------------------~~~~E~ 74 (350)
T d1koaa2 32 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHES----DKE---------------------------------TVRKEI 74 (350)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECCCSHH----HHH---------------------------------HHHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEcccchh----hHH---------------------------------HHHHHH
Confidence 67999999999999976 8999999987654321 100 144577
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.+++|. .-+.+-.++. ....+|||||++|++|.+........++...+...+.+++ +
T Consensus 75 ~il~~l~Hp-----------------nIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL 137 (350)
T d1koaa2 75 QTMSVLRHP-----------------TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGL 137 (350)
T ss_dssp HHHHHTCCT-----------------TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCC-----------------CCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence 776666431 1122333333 5678899999999999876533334466666666655555 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
..+|+.|++|||+||+|||+..+.++.++|+|||+++.++..
T Consensus 138 ~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~ 179 (350)
T d1koaa2 138 CHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 179 (350)
T ss_dssp HHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT
T ss_pred HHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccc
Confidence 899999999999999999997655689999999999887653
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=7e-18 Score=177.80 Aligned_cols=140 Identities=17% Similarity=0.164 Sum_probs=100.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.+..-... ..-++.+|+
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~------------------------------------~~~~~~~Ei 54 (271)
T d1nvra_ 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD------------------------------------CPENIKKEI 54 (271)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------------------------------------------CHHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEehhhcch------------------------------------HHHHHHHHH
Confidence 67999999999999986 89999999975432110 001255677
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++++ ++ +.+-..+. ....+|||||++|++|.++.. ....++...+...+.+++
T Consensus 55 ~~l~~l~H------------------pnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~-~~~~l~e~~~~~i~~qi~~a 115 (271)
T d1nvra_ 55 CINKMLNH------------------ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAG 115 (271)
T ss_dssp HHHHTCCC------------------TTBCCEEEEEEETTEEEEEEECCTTEEGGGGSB-TTTBCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------CCEeeEeeeeccCceeEEEEeccCCCcHHHHHh-cCCCCCHHHHHHHHHHHHHH
Confidence 66665532 22 22222222 456789999999999988754 233466666655555554
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|+.||+|||+||+|||++.+ ++++|+|||+++.+..
T Consensus 116 l~ylH~~~IiHrDiKp~NILl~~~--~~~KL~DFG~a~~~~~ 155 (271)
T d1nvra_ 116 VVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRY 155 (271)
T ss_dssp HHHHHHTTEECSCCCGGGEEECTT--CCEEECCCTTCEECEE
T ss_pred HHHHHHcCCccCcccHHHEEECCC--CCEEEccchhheeecc
Confidence 888999999999999999999865 8999999999987643
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=6.8e-18 Score=177.15 Aligned_cols=142 Identities=17% Similarity=0.134 Sum_probs=101.1
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.++..... - ..+-.+.+|+
T Consensus 12 ~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~----~------------------------------~~~~~~~~E~ 57 (263)
T d2j4za1 12 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEK----A------------------------------GVEHQLRREV 57 (263)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH----T------------------------------TCHHHHHHHH
T ss_pred EEEecCCCcEEEEEEECCCCcEEEEEEEchHHccC----h------------------------------HHHHHHHHHH
Confidence 68999999999999986 79999999875321100 0 0011244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.+ ++ +.+-.++. ....+|||||++|++|.+... ....++...+...+.+++
T Consensus 58 ~il~~l~h------------------pnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~-~~~~l~e~~~~~i~~qi~~a 118 (263)
T d2j4za1 58 EIQSHLRH------------------PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANA 118 (263)
T ss_dssp HHHHTCCC------------------TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHH
T ss_pred HHHHhcCC------------------CCCCeEEEEEEECCEEEEEEeecCCCcHHHHHh-hcCCCCHHHHHHHHHHHHHH
Confidence 65555422 22 22222333 456789999999999988754 234567666666655555
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|+.||+|||+||+|||++.+ |.++|+|||++..++.
T Consensus 119 l~~lH~~~ivHrDiKp~Nill~~~--~~~kl~DFG~a~~~~~ 158 (263)
T d2j4za1 119 LSYCHSKRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPS 158 (263)
T ss_dssp HHHHHHTTCCCCCCCGGGEEECTT--SCEEECCCCSCSCCCC
T ss_pred HHHHHHCCeeeeeeccccceecCC--CCEeecccceeeecCC
Confidence 888999999999999999999865 8999999999987754
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=1.2e-17 Score=176.63 Aligned_cols=147 Identities=16% Similarity=0.229 Sum_probs=103.8
Q ss_pred cccccccccccccceeeEEEEec---CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 5 FMDFVETPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 5 F~~fd~~plasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
+-.+|++.||+|+||+||+|+++ +++.||||+.+....+.- ..
T Consensus 7 ~~~le~k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~-----------------------------~~----- 52 (277)
T d1xbba_ 7 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPA-----------------------------LK----- 52 (277)
T ss_dssp GEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CH-----------------------------HH-----
T ss_pred hCeecCCCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHH-----------------------------HH-----
Confidence 33567778999999999999864 357899999764322110 00
Q ss_pred hccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHH
Q 002927 82 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 160 (864)
Q Consensus 82 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 160 (864)
-.|.+|++.+.+++| +++ .+-.+......+|||||++|++|.++.. ....++...+...
T Consensus 53 -~~~~~E~~il~~l~H------------------pnIv~~~g~~~~~~~~lvmE~~~~g~L~~~l~-~~~~l~~~~~~~i 112 (277)
T d1xbba_ 53 -DELLAEANVMQQLDN------------------PYIVRMIGICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIEL 112 (277)
T ss_dssp -HHHHHHHHHHHTCCC------------------TTBCCEEEEEESSSEEEEEECCTTEEHHHHHH-HCTTCCHHHHHHH
T ss_pred -HHHHHHHHHHHhCCC------------------CCCceEEEEeccCCEEEEEEcCCCCcHHHHHh-hccCCCHHHHHHH
Confidence 125567777666533 221 2222223556789999999999998754 2344666766666
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+.++. +..+|+.|++|||+||.|||++.+ +.++|+|||+++.+..
T Consensus 113 ~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~--~~~kl~DFGla~~~~~ 159 (277)
T d1xbba_ 113 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQ--HYAKISDFGLSKALRA 159 (277)
T ss_dssp HHHHHHHHHHHHHTTEECSCCSGGGEEEEET--TEEEECCCTTCEECCT
T ss_pred HHHHHHHHhhHHhCCcccCCCcchhhccccc--Ccccccchhhhhhccc
Confidence 66655 888999999999999999999976 8999999999987654
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.69 E-value=1.8e-17 Score=175.23 Aligned_cols=154 Identities=16% Similarity=0.192 Sum_probs=108.7
Q ss_pred cccc-ccccccccceeeEEEEec-CCCEEEEEEecCChHHHH-HHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhh
Q 002927 6 MDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTII-LEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 82 (864)
Q Consensus 6 ~~fd-~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~-~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 82 (864)
++|+ .+.||+|++|+||+|+.+ +|+.||||+.+....... ..+. ++..+
T Consensus 3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~-----------------------~~~~~----- 54 (277)
T d1phka_ 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEV-----------------------QELRE----- 54 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHH-----------------------HHHHH-----
T ss_pred ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHH-----------------------HHHHH-----
Confidence 4444 378999999999999976 899999998754321110 0011 11111
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHH
Q 002927 83 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 160 (864)
Q Consensus 83 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 160 (864)
.+.+|++.+.++.. ++. +.+-.++. ....+|||||++|++|.++... ...++...+...
T Consensus 55 -~~~~E~~~l~~l~~-----------------hpnIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~-~~~l~e~~~~~~ 115 (277)
T d1phka_ 55 -ATLKEVDILRKVSG-----------------HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETRKI 115 (277)
T ss_dssp -HHHHHHHHHHHHTT-----------------CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HSSCCHHHHHHH
T ss_pred -HHHHHHHHHHHhcC-----------------CCCeEEEEeecccCcceEEEEEcCCCchHHHHHHh-cCCCCHHHHHHH
Confidence 25568888887742 111 22333333 4556899999999999988653 446677776666
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+.+++ ++.+|+.|++|||+||+|||++.+ +.++|+|||+++.+++.
T Consensus 116 ~~qi~~al~~lH~~~ivHrDlkp~Nill~~~--~~~kl~DFG~a~~~~~~ 163 (277)
T d1phka_ 116 MRALLEVICALHKLNIVHRDLKPENILLDDD--MNIKLTDFGFSCQLDPG 163 (277)
T ss_dssp HHHHHHHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCCTTCEECCTT
T ss_pred HHHHHHHHHHHHHcCCcccccccceEEEcCC--CCeEEccchheeEccCC
Confidence 66655 889999999999999999999865 89999999999887653
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=1.7e-17 Score=175.13 Aligned_cols=137 Identities=19% Similarity=0.223 Sum_probs=101.5
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|+||.||+|++++++.||||+.+.+.... -.|.+|++
T Consensus 19 ~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~--------------------------------------~~~~~E~~ 60 (272)
T d1qpca_ 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP--------------------------------------DAFLAEAN 60 (272)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTSSCH--------------------------------------HHHHHHHH
T ss_pred EEEecCCCcEEEEEEECCCCEEEEEEEccCcCCH--------------------------------------HHHHHHHH
Confidence 6799999999999999888999999876432110 01556777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHH-hhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~-~~~~~~~~~l~~~~~~~~- 165 (864)
.+.++++ ++ |.+++. ....+|||||++|++|.+.... ....++...+...+.++.
T Consensus 61 ~l~~l~H------------------pn--Iv~~~g~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~ 120 (272)
T d1qpca_ 61 LMKQLQH------------------QR--LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120 (272)
T ss_dssp HHHHCCC------------------TT--BCCEEEEECSSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHhCCC------------------CC--EeEEEeeeccCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHH
Confidence 7776643 11 223332 5567899999999999875432 223466666666555554
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|..|++|||+||.||||+.+ +.++|+|||+++.+.+
T Consensus 121 gl~~lH~~~ivHrDiKp~NIll~~~--~~~Kl~DFGla~~~~~ 161 (272)
T d1qpca_ 121 GMAFIEERNYIHRDLRAANILVSDT--LSCKIADFGLARLIED 161 (272)
T ss_dssp HHHHHHHTTEECSCCSGGGEEECTT--SCEEECCCTTCEECSS
T ss_pred HHHHHHhCCcccCccchhheeeecc--cceeeccccceEEccC
Confidence 888999999999999999999865 8999999999987754
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=1.2e-17 Score=175.40 Aligned_cols=141 Identities=20% Similarity=0.195 Sum_probs=98.0
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|+||+||+|++++++.||||+.+.+... +-+|.+|++
T Consensus 11 ~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~--------------------------------------~~~~~~E~~ 52 (263)
T d1sm2a_ 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS--------------------------------------EEDFIEEAE 52 (263)
T ss_dssp EEEECCSSCCEEEEEETTTEEEEEEECCSSSSC--------------------------------------HHHHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCEEEEEEECCCcCc--------------------------------------HHHHHHHHH
Confidence 569999999999999989999999987653221 012566777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~ 167 (864)
.+.+++|.. -+.+-.++. ....+|||||++|++|.++........+...+...+.++. +.
T Consensus 53 ~l~~l~Hpn-----------------Iv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~ 115 (263)
T d1sm2a_ 53 VMMKLSHPK-----------------LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 115 (263)
T ss_dssp HHHHCCCTT-----------------BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCC-----------------cccccceeccCCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHH
Confidence 777764311 122222222 5678899999999999987544444455655555554444 88
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
.+|..|++|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 116 ~lH~~~iiHrDlKp~Nill~~~--~~~Kl~DFGla~~~~~~ 154 (263)
T d1sm2a_ 116 YLEEACVIHRDLAARNCLVGEN--QVIKVSDFGMTRFVLDD 154 (263)
T ss_dssp HHHHTTCCCTTCSGGGEEECGG--GCEEECSCC--------
T ss_pred hhhccceeecccchhheeecCC--CCeEecccchheeccCC
Confidence 8999999999999999999965 89999999999876543
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=2.6e-17 Score=174.79 Aligned_cols=140 Identities=21% Similarity=0.235 Sum_probs=102.4
Q ss_pred ccccccceeeEEEEec---CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 12 PLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 12 plasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
-||+|+||.||+|+.+ ++..||||+.++...+.. . -+|.+|
T Consensus 16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~---~---------------------------------~~~~~E 59 (285)
T d1u59a_ 16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKAD---T---------------------------------EEMMRE 59 (285)
T ss_dssp EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHH---H---------------------------------HHHHHH
T ss_pred EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHH---H---------------------------------HHHHHH
Confidence 4999999999999864 355899999876543221 0 025567
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
++.+.++++ ++ +.+-.+......+|||||++|++|.++.......++...+...+.++.
T Consensus 60 ~~il~~l~H------------------pnIv~l~g~~~~~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~g 121 (285)
T d1u59a_ 60 AQIMHQLDN------------------PYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG 121 (285)
T ss_dssp HHHHHHCCC------------------TTBCCEEEEEESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCC------------------CCEeeEeeeeccCeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHH
Confidence 777776643 11 112222235667899999999999887543334566666666666655
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|+.|++|||+||.|||++.+ +.++|+|||+++.+..
T Consensus 122 L~ylH~~~iiHrDlKp~Nill~~~--~~~Kl~DFGla~~~~~ 161 (285)
T d1u59a_ 122 MKYLEEKNFVHRDLAARNVLLVNR--HYAKISDFGLSKALGA 161 (285)
T ss_dssp HHHHHHTTEECCCCSGGGEEEEET--TEEEECCCTTCEECTT
T ss_pred HHHHHhCCeecCcCchhheeeccC--Cceeeccchhhhcccc
Confidence 888999999999999999999975 8999999999987754
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.68 E-value=1.7e-17 Score=176.35 Aligned_cols=140 Identities=20% Similarity=0.166 Sum_probs=100.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||+||+|+++ +|+.||||+.+.+..+. -+|.+|+
T Consensus 23 ~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~--------------------------------------~~~~~E~ 64 (287)
T d1opja_ 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------------------------------------EEFLKEA 64 (287)
T ss_dssp EETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCH--------------------------------------HHHHHHH
T ss_pred eEEeeCCCeEEEEEEECCCCeEEEEEEECCccchH--------------------------------------HHHHHHH
Confidence 67999999999999986 69999999876432210 0255677
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHh-hcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.+++|.. -+.+-.++. ....+|||||++|++|.++.... ....+...+...+.+++
T Consensus 65 ~il~~l~Hpn-----------------Iv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~g 127 (287)
T d1opja_ 65 AVMKEIKHPN-----------------LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 127 (287)
T ss_dssp HHHHHCCCTT-----------------BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCC-----------------EecCCccEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHH
Confidence 7777664311 112222222 45678999999999998875422 23445555555544444
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|+.||+|||+||.|||++.+ +.++|+|||+++.++.
T Consensus 128 L~yLH~~~iiHrDlKp~NILl~~~--~~~Kl~DFG~a~~~~~ 167 (287)
T d1opja_ 128 MEYLEKKNFIHRDLAARNCLVGEN--HLVKVADFGLSRLMTG 167 (287)
T ss_dssp HHHHHHTTCCCSCCSGGGEEECGG--GCEEECCCCCTTTCCS
T ss_pred HHHHHHCCcccCccccCeEEECCC--CcEEEccccceeecCC
Confidence 889999999999999999999865 8999999999987654
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.67 E-value=1.5e-17 Score=178.62 Aligned_cols=143 Identities=17% Similarity=0.132 Sum_probs=101.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||.||+|+.+ +|+.||||+.+......- .. . -++.+|+
T Consensus 21 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~-~~---------------------------~------~~~~~Ei 66 (309)
T d1u5ra_ 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSN-EK---------------------------W------QDIIKEV 66 (309)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHH-HH---------------------------H------HHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCH-HH---------------------------H------HHHHHHH
Confidence 67999999999999975 899999998765432110 00 0 0144566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.+++|. .-+.+-.++. ....+|||||++|.++.... .....++...+...+.+++ +
T Consensus 67 ~il~~l~Hp-----------------nIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~-~~~~~l~e~~~~~i~~qi~~aL 128 (309)
T d1u5ra_ 67 RFLQKLRHP-----------------NTIQYRGCYLREHTAWLVMEYCLGSASDLLE-VHKKPLQEVEIAAVTHGALQGL 128 (309)
T ss_dssp HHHTTCCCT-----------------TBCCEEEEEEETTEEEEEEECCSEEHHHHHH-HHTSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCC-----------------CEeeEEEEEEECCEEEEEEEecCCCchHHHH-HhCCCCCHHHHHHHHHHHHHHH
Confidence 665554321 1122333333 55678999999999886543 3345577766666666555 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|..||+|||+||.|||++.+ +.++|+|||++.....
T Consensus 129 ~yLH~~~iiHrDiKp~NILl~~~--~~~Kl~DFG~a~~~~~ 167 (309)
T d1u5ra_ 129 AYLHSHNMIHRDVKAGNILLSEP--GLVKLGDFGSASIMAP 167 (309)
T ss_dssp HHHHHTTCBCCCCSGGGEEEETT--TEEEECCCTTCBSSSS
T ss_pred HHHHhCCEeccCCCcceEEECCC--CCEEEeecccccccCC
Confidence 88999999999999999999865 8999999999987654
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=2.5e-17 Score=175.13 Aligned_cols=144 Identities=16% Similarity=0.126 Sum_probs=99.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+.... ..+ -.. -.+.+|+
T Consensus 14 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~---~~~-----------------~~~--------------~~~~~E~ 59 (288)
T d1uu3a_ 14 KILGEGSFSTVVLARELATSREYAIKILEKRHI---IKE-----------------NKV--------------PYVTRER 59 (288)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH---HHT-----------------TCH--------------HHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehHHc---cCH-----------------HHH--------------HHHHHHH
Confidence 68999999999999976 899999998753110 000 000 0145566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.+ +. +.+-..+. ....+|||||++|++|.++.. ....++...+...+.+++
T Consensus 60 ~il~~l~H------------------pnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~-~~~~l~e~~~~~~~~qi~~a 120 (288)
T d1uu3a_ 60 DVMSRLDH------------------PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSA 120 (288)
T ss_dssp HHHHHCCS------------------TTBCCEEEEEECSSEEEEEECCCTTEEHHHHHH-HHSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCC------------------CCeeEEEEEEEECCEEEEEEEccCCCCHHHhhh-ccCCCCHHHHHHHHHHHHHH
Confidence 66666532 11 22222222 455789999999999988754 234566666555555544
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChHH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 209 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 209 (864)
+..+|+.|++|||+||+|||++.+ |.++|+|||+++.++...
T Consensus 121 l~ylH~~~iiHrDiKp~NIll~~~--~~vkl~DFG~a~~~~~~~ 162 (288)
T d1uu3a_ 121 LEYLHGKGIIHRDLKPENILLNED--MHIQITDFGTAKVLSPES 162 (288)
T ss_dssp HHHHHHTTEECSCCSGGGEEECTT--SCEEECCCTTCEECC---
T ss_pred HHhhccccEEcCcCCccccccCCC--ceEEecccccceecccCC
Confidence 888999999999999999999865 899999999999887543
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=1.3e-17 Score=180.44 Aligned_cols=140 Identities=20% Similarity=0.196 Sum_probs=97.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||.||+|+.+ +|+.||||+.+........ .. +.+|+
T Consensus 12 ~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~------------------------------~~------~~~Ei 55 (322)
T d1s9ja_ 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR------------------------------NQ------IIREL 55 (322)
T ss_dssp EEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHH------------------------------HH------HHHHG
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHH------------------------------HH------HHHHH
Confidence 67999999999999976 8999999997654321110 11 23344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+++++| ++ +.+-.++. .+..+|||||++|++|.++.. ....++...+...+.+++
T Consensus 56 ~il~~l~H------------------pnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~-~~~~l~~~~~~~~~~qil~a 116 (322)
T d1s9ja_ 56 QVLHECNS------------------PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKG 116 (322)
T ss_dssp GGGGGCCC------------------TTBCCEEEEEECSSEEEEEEECCTTEEHHHHHH-HHSSCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------CCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHh-hcCCCCHHHHHHHHHHHHHH
Confidence 44433322 21 22223333 456789999999999988764 334566666555555544
Q ss_pred HHHHHh-cCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|+ +||+|||+||+|||++.+ |+++|+|||+++.+.+
T Consensus 117 L~yLH~~~~IiHRDiKP~NILl~~~--~~vkl~DFGla~~~~~ 157 (322)
T d1s9ja_ 117 LTYLREKHKIMHRDVKPSNILVNSR--GEIKLCDFGVSGQLID 157 (322)
T ss_dssp HHHHHHHHCCCCSCCSGGGEEECTT--CCEEECCCCCCHHHHH
T ss_pred HHHHHHhCCEEccccCHHHeeECCC--CCEEEeeCCCccccCC
Confidence 788896 699999999999999865 8999999999976543
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=2.7e-17 Score=173.17 Aligned_cols=143 Identities=19% Similarity=0.232 Sum_probs=92.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||+||+|+.+ +|+.||||+.+....... +. + .+.+|+
T Consensus 10 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~--~~---------------------------~------~~~~E~ 54 (269)
T d2java1 10 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEA--EK---------------------------Q------MLVSEV 54 (269)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHH--HH---------------------------H------HHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHH--HH---------------------------H------HHHHHH
Confidence 68999999999999976 899999998765432110 00 0 134566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe---cCCceEEEeecCCcCCCChHHH---hhcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ---SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~---~~~~~~~~~l~~~~~ 162 (864)
+.+.++.+ +++ .+-.++. ....+|||||++|++|.++... ....++...+...+.
T Consensus 55 ~il~~l~H------------------pnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~ 116 (269)
T d2java1 55 NLLRELKH------------------PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 116 (269)
T ss_dssp HHTTSCCC------------------TTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHCCC------------------CCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHH
Confidence 55554422 222 2222222 2345799999999999987542 123466666666655
Q ss_pred HHH--HHHHHhcC-----eeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 163 RAY--AHQIYVDG-----FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 163 ~~~--l~~i~~~G-----~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+++ +..+|+.| |+|||+||+|||++.+ |.++|+|||+++.++..
T Consensus 117 qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~--~~vkl~DFG~a~~~~~~ 167 (269)
T d2java1 117 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK--QNVKLGDFGLARILNHD 167 (269)
T ss_dssp HHHHHHHHHHHHCC---------CCGGGEEECTT--SCEEECCHHHHHHC---
T ss_pred HHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCC--CcEEEeeccceeecccC
Confidence 554 88899876 9999999999999865 89999999999887653
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.66 E-value=5.2e-17 Score=173.65 Aligned_cols=140 Identities=19% Similarity=0.206 Sum_probs=93.6
Q ss_pred cccccccceeeEEEEec-CCC---EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV-DGR---QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~---~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|+||+||+|+++ +|+ .||||..++...+... -+|.
T Consensus 32 ~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~~~ 75 (299)
T d1jpaa_ 32 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR------------------------------------RDFL 75 (299)
T ss_dssp EEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHH------------------------------------HHHH
T ss_pred eEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHH------------------------------------HHHH
Confidence 57999999999999976 443 5888987665432211 0255
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
+|++.+.+++| ++ |-+++. ....+|||||++|++|.++.......++...+...+.
T Consensus 76 ~E~~~l~~l~H------------------pn--Iv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~ 135 (299)
T d1jpaa_ 76 SEASIMGQFDH------------------PN--VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR 135 (299)
T ss_dssp HHHHHHTTCCC------------------TT--BCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHH
T ss_pred HHHHHHHhCCC------------------CC--CccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHH
Confidence 67766665532 22 223332 4678999999999999887654444566666666555
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
++. +..+|..|++|||+||.|||++.+ +.++|+|||+++.+.+.
T Consensus 136 qia~gl~yLH~~~iiHrDlKp~NILl~~~--~~~Kl~DFGla~~~~~~ 181 (299)
T d1jpaa_ 136 GIAAGMKYLADMNYVHRDLAARNILVNSN--LVCKVSDFGLSRFLEDD 181 (299)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEECTT--CCEEECCC---------
T ss_pred HHHHHHHHHhhCCCccCccccceEEECCC--CcEEECCcccceEccCC
Confidence 554 889999999999999999999865 89999999999877654
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.65 E-value=3.8e-17 Score=176.07 Aligned_cols=142 Identities=20% Similarity=0.241 Sum_probs=96.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+...... .+ . .+ .+.+|+
T Consensus 10 ~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~----~~----------------~--------~~------~~~~E~ 55 (316)
T d1fota_ 10 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR----LK----------------Q--------VE------HTNDER 55 (316)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH----TT----------------C--------HH------HHHHHH
T ss_pred EEEecCcCcEEEEEEECCCCCEEEEEEEchHHccC----HH----------------H--------HH------HHHHHH
Confidence 78999999999999976 79999999976321100 00 0 00 134566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++++ +. +.+-.++. ....++||||++|.++.++.. .........+...+.+++
T Consensus 56 ~il~~l~H------------------pnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~-~~~~~~~~~~~~~~~qi~~a 116 (316)
T d1fota_ 56 LMLSIVTH------------------PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR-KSQRFPNPVAKFYAAEVCLA 116 (316)
T ss_dssp HHHHSCCB------------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HTSSCCHHHHHHHHHHHHHH
T ss_pred HHHHhccC------------------cChhheeeeEeeCCeeeeEeeecCCcccccccc-ccccccccHHHHHHHHHHHh
Confidence 55554422 22 22223333 456789999999998877654 233444444433333333
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|+.||+|||+||+|||++.+ |.++|+|||+++.+..
T Consensus 117 l~~lH~~~iiHrDiKp~NILl~~~--g~vkL~DFG~a~~~~~ 156 (316)
T d1fota_ 117 LEYLHSKDIIYRDLKPENILLDKN--GHIKITDFGFAKYVPD 156 (316)
T ss_dssp HHHHHTTTEECCCCCGGGEEECTT--SCEEECCCSSCEECSS
T ss_pred hhhhccCcEEccccCchheeEcCC--CCEEEecCccceEecc
Confidence 888999999999999999999865 8999999999988754
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.65 E-value=5.6e-17 Score=174.02 Aligned_cols=143 Identities=20% Similarity=0.201 Sum_probs=93.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||.||+|+.+ +|+.||||+........ .+-.+.+|+
T Consensus 15 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~------------------------------------~~~~~~~Ei 58 (307)
T d1a06a_ 15 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG------------------------------------KEGSMENEI 58 (307)
T ss_dssp EESBSGGGGGEEEEEETTTCCEEEEEEEEC----------------------------------------------CHHH
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhh------------------------------------HHHHHHHHH
Confidence 67999999999999976 79999999976432111 011244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++.+ ++ +.+-.++. ....+|||||++|++|.+... ....++...+...+.+++
T Consensus 59 ~il~~l~H------------------pnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~-~~~~l~e~~~~~~~~qi~~a 119 (307)
T d1a06a_ 59 AVLHKIKH------------------PNIVALDDIYESGGHLYLIMQLVSGGELFDRIV-EKGFYTERDASRLIFQVLDA 119 (307)
T ss_dssp HHHHTCCC------------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-TCSCCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------CCCCcEEEEEEECCEEEEEEeccCCCcHHHhhh-cccCCCHHHHHHHHHHHHHH
Confidence 66555422 22 22223333 456789999999999988753 334566666666665555
Q ss_pred HHHHHhcCeeccCCCCCCeEEcc-CCCCceEEEecccccccChH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSK-DPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~-~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|+.|++|||+||+|||+.. +.++.++|+|||+++.++..
T Consensus 120 l~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~ 163 (307)
T d1a06a_ 120 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG 163 (307)
T ss_dssp HHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC---------
T ss_pred HHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCC
Confidence 88899999999999999999964 23589999999999876543
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=3e-17 Score=173.45 Aligned_cols=139 Identities=16% Similarity=0.206 Sum_probs=98.2
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|+||.||+|+++ ..||||+.+...... .+. -.|.+|++
T Consensus 14 ~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~--~~~---------------------------------~~~~~E~~ 56 (276)
T d1uwha_ 14 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTP--QQL---------------------------------QAFKNEVG 56 (276)
T ss_dssp SEEEECSSCEEEEEESS--SEEEEEECCCSSCCT--THH---------------------------------HHHHHHHH
T ss_pred EEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCH--HHH---------------------------------HHHHHHHH
Confidence 67999999999999864 369999976432110 000 02556776
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
.+.+++| +++ -+++. ....+|||||++|++|.++.......++...+...+.++.
T Consensus 57 ~l~~l~H------------------pnI--v~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~g 116 (276)
T d1uwha_ 57 VLRKTRH------------------VNI--LLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 116 (276)
T ss_dssp HHTTCCC------------------TTB--CCEEEEECSSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHH
T ss_pred HHHhCCC------------------CCE--eeeeEEEeccEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHH
Confidence 6666532 222 23332 4567899999999999887643444567766666665555
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|+.||+|||+||.|||++.+ +.++|+|||+++.++..
T Consensus 117 l~yLH~~~ivHrDlKp~NiLl~~~--~~~Kl~DFGla~~~~~~ 157 (276)
T d1uwha_ 117 MDYLHAKSIIHRDLKSNNIFLHED--LTVKIGDFGLATVKSRW 157 (276)
T ss_dssp HHHHHHTTCCCSCCCGGGEEEETT--SSEEECCCCCSCC----
T ss_pred HHHHhcCCEeccccCHHHEEEcCC--CCEEEccccceeecccc
Confidence 888999999999999999999865 89999999999877643
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.65 E-value=6.6e-17 Score=177.60 Aligned_cols=145 Identities=14% Similarity=0.079 Sum_probs=97.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||.||+|+.+ +|+.||||+..+... ..+ ..+..+.+|.
T Consensus 10 ~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~---~~~-------------------------------~~~~~~~~e~ 55 (364)
T d1omwa3 10 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRI---KMK-------------------------------QGETLALNER 55 (364)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH---HHH-------------------------------TCHHHHHHHH
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEEchHHc---chh-------------------------------hHHHHHHHHH
Confidence 68999999999999976 799999998753111 000 0011122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+..++.. +++.+ .+-.++. ....+|||||++|++|.++... ........+...+.+++
T Consensus 56 ~~~~~l~~~---------------~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~~a 119 (364)
T d1omwa3 56 IMLSLVSTG---------------DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILG 119 (364)
T ss_dssp HHHHHHSSS---------------CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-HCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcC---------------CCCcEEEEEEEEEECCEEEEEEEecCCCcHHHHHHh-cccccHHHHHHHHHHHHHH
Confidence 333333210 12222 1222222 4567899999999999887542 33455555555444444
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|+.|++|||+||+|||++.+ |.++|+|||+++.+..
T Consensus 120 L~ylH~~~iiHrDlKP~NILl~~~--g~iKl~DFGla~~~~~ 159 (364)
T d1omwa3 120 LEHMHNRFVVYRDLKPANILLDEH--GHVRISDLGLACDFSK 159 (364)
T ss_dssp HHHHHHTTEECCCCSGGGEEECSS--SCEEECCCTTCEECSS
T ss_pred HHHHHHCCccceeeccceeEEcCC--CcEEEeeeceeeecCC
Confidence 888999999999999999999865 8999999999987764
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=8.3e-17 Score=169.40 Aligned_cols=148 Identities=15% Similarity=0.085 Sum_probs=99.0
Q ss_pred ccccccccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhh
Q 002927 4 MFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 82 (864)
Q Consensus 4 ~F~~fd~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 82 (864)
.|-.|++ -||+|+||.||+|+.+ +|+.||||+........ .+.
T Consensus 9 ry~~~~~-~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~--~~~--------------------------------- 52 (270)
T d1t4ha_ 9 RFLKFDI-EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK--SER--------------------------------- 52 (270)
T ss_dssp CEEEEEE-EEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH--HHH---------------------------------
T ss_pred CEEEeee-EEecCcCcEEEEEEECCCCeEEEEEEEchhhCCH--HHH---------------------------------
Confidence 3445653 5999999999999976 79999999865321100 000
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEec-----CCceEEEeecCCcCCCChHHHhhcCCCHHH
Q 002927 83 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQS-----SETVLILEFMDGIRLNDCESLEAFGVNKQK 156 (864)
Q Consensus 83 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~~-----~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ 156 (864)
-+|.+|++.+.+++| ++ +.+-.++.+ ...+|||||++|.+|.++.. .....+...
T Consensus 53 ~~~~~E~~il~~l~H------------------pnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~-~~~~~~~~~ 113 (270)
T d1t4ha_ 53 QRFKEEAEMLKGLQH------------------PNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK-RFKVMKIKV 113 (270)
T ss_dssp HHHHHHHHHHTTCCC------------------TTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHH-HHSSCCHHH
T ss_pred HHHHHHHHHHHhCCC------------------CCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHh-ccccccHHH
Confidence 024557666655432 11 122222221 12479999999999988754 233456655
Q ss_pred HHHHHHHHH--HHHHHhcC--eeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 157 VVEEITRAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 157 l~~~~~~~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+...+.+++ +..+|+.| |+|||+||+|||++.+ ++.++|+|||+++....
T Consensus 114 ~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~-~~~~Kl~DFGla~~~~~ 167 (270)
T d1t4ha_ 114 LRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGP-TGSVKIGDLGLATLKRA 167 (270)
T ss_dssp HHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESST-TSCEEECCTTGGGGCCT
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCC-CCCEEEeecCcceeccC
Confidence 555444444 77899999 9999999999999742 48999999999875443
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=8.2e-17 Score=168.32 Aligned_cols=141 Identities=20% Similarity=0.191 Sum_probs=104.0
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|+||.||+|+.+++++||||+.+.+-.. +-+|.+|.+
T Consensus 10 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~--------------------------------------~~~~~~Ev~ 51 (258)
T d1k2pa_ 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--------------------------------------EDEFIEEAK 51 (258)
T ss_dssp CCCCEETTEEEEEEEETTTEEEEEEEEESSSSC--------------------------------------HHHHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCEEEEEEECcCcCC--------------------------------------HHHHHHHHH
Confidence 679999999999999988999999997753211 012556776
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 167 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~ 167 (864)
.+.+++|. .-+.+-.++. ....++||||++|+++.+.............+...+.++. +.
T Consensus 52 ~~~~l~Hp-----------------nIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~ 114 (258)
T d1k2pa_ 52 VMMNLSHE-----------------KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 114 (258)
T ss_dssp HHHTCCCT-----------------TBCCEEEEECCSSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCC-----------------ceeeEEEEEeeCCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHH
Confidence 66665321 0122222222 4567899999999998887655555666666666555554 88
Q ss_pred HHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 168 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 168 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
.+|+.|++|||+||.||+++.+ +.++|+|||+++.+...
T Consensus 115 ~LH~~~iiH~dlk~~Nill~~~--~~~kl~DfG~a~~~~~~ 153 (258)
T d1k2pa_ 115 YLESKQFLHRDLAARNCLVNDQ--GVVKVSDFGLSRYVLDD 153 (258)
T ss_dssp HHHHTTBCCSCCSGGGEEECTT--CCEEECCCSSCCBCSSS
T ss_pred HHhhcCcccccccceeEEEcCC--CcEEECcchhheeccCC
Confidence 9999999999999999999865 89999999999876543
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=8.3e-17 Score=170.74 Aligned_cols=138 Identities=17% Similarity=0.198 Sum_probs=101.6
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|+||+||+|+++++++||||+.+.+-... -+|.+|+.
T Consensus 23 ~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~--------------------------------------~~~~~E~~ 64 (285)
T d1fmka3 23 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--------------------------------------EAFLQEAQ 64 (285)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEECCTTSSCH--------------------------------------HHHHHHHH
T ss_pred eEEeeCCCeEEEEEEECCCCEEEEEEECcccCCH--------------------------------------HHHHHHHH
Confidence 6799999999999999888899999876432210 12566887
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~~- 165 (864)
.+.++++. + |-+++. ..+.+|||||++|+++.+...... ..++...+...+.++.
T Consensus 65 ~l~~l~h~------------------n--Iv~~~g~~~~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~ 124 (285)
T d1fmka3 65 VMKKLRHE------------------K--LVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 124 (285)
T ss_dssp HHHHCCCT------------------T--BCCEEEEECSSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHhcccC------------------C--EeEEEEEEecCCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHH
Confidence 77776431 1 233332 567899999999999887754332 3467777666666655
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|..|++|||+||.|||++.+ +.++|+|||+++.+.+.
T Consensus 125 gl~~LH~~~ivH~DlKp~NIll~~~--~~~kl~DfGla~~~~~~ 166 (285)
T d1fmka3 125 GMAYVERMNYVHRDLRAANILVGEN--LVCKVADFGLARLIEDN 166 (285)
T ss_dssp HHHHHHHTTCCCSCCSGGGEEECGG--GCEEECCCCTTC-----
T ss_pred HHHHHhhhheecccccceEEEECCC--CcEEEcccchhhhccCC
Confidence 889999999999999999999865 89999999999876543
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=9.4e-17 Score=174.34 Aligned_cols=143 Identities=15% Similarity=0.102 Sum_probs=97.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+..... +- + ..-.+.+|.
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~----~~------------------------~------~~~~~~~E~ 56 (337)
T d1o6la_ 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVII----AK------------------------D------EVAHTVTES 56 (337)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH----HT------------------------T------CHHHHHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEchhhcc----CH------------------------H------HHHHHHHHH
Confidence 68999999999999976 8999999997621100 00 0 000134465
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++.+. .-+.+-.++. ....+|||||++|++|.+... ....++...+...+.+++ +
T Consensus 57 ~il~~l~hp-----------------~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~-~~~~~~e~~~~~~~~qil~al 118 (337)
T d1o6la_ 57 RVLQNTRHP-----------------FLTALKYAFQTHDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVSAL 118 (337)
T ss_dssp HHHHSCCCT-----------------TBCCEEEEEECSSEEEEEEECCTTCBHHHHHH-HHSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCC-----------------CEEEEEeeeccccccccceeccCCCchhhhhh-cccCCcHHHHHHHHHHHhhhh
Confidence 555544221 1122222233 455789999999999987754 233455555544444444 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..+|+.|++|||+||+|||++.+ |.++|+|||+++.+..
T Consensus 119 ~ylH~~~iiHRDlKP~NILl~~~--g~vkl~DFG~a~~~~~ 157 (337)
T d1o6la_ 119 EYLHSRDVVYRDIKLENLMLDKD--GHIKITDFGLCKEGIS 157 (337)
T ss_dssp HHHHHTTCBCCCCCGGGEEECTT--SCEEECCCTTCBCSCC
T ss_pred hhhhhcCccccccCHHHeEecCC--CCEEEeeccccccccc
Confidence 88999999999999999999865 8999999999987643
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.63 E-value=1.8e-16 Score=167.48 Aligned_cols=143 Identities=22% Similarity=0.354 Sum_probs=100.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.++.....- . . ...|.+|+
T Consensus 13 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~----~------------------------~------~~~~~~E~ 58 (277)
T d1o6ya_ 13 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDP----S------------------------F------YLRFRREA 58 (277)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCH----H------------------------H------HHHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCH----H------------------------H------HHHHHHHH
Confidence 68999999999999975 899999999876543210 0 0 01245577
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cC----CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SS----ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~----~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~ 163 (864)
+.+.++.+ ++ +.+-.++. .. ..+|||||++|.+|.+... ....++...+...+.+
T Consensus 59 ~~l~~~~h------------------pniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~-~~~~l~~~~~~~i~~q 119 (277)
T d1o6ya_ 59 QNAAALNH------------------PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEGPMTPKRAIEVIAD 119 (277)
T ss_dssp HHHHTCCC------------------TTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHH-HHCSCCHHHHHHHHHH
T ss_pred HHHHhcCC------------------CCCCcccceeeeccCCCceEEEEEECCCCCEehhhhc-ccCCCCHHHHHHHHHH
Confidence 66655432 22 22222222 11 2579999999999987653 3345677666666655
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
++ +..+|+.|++|||+||+|||++.+ +.++++|||.+..+...
T Consensus 120 i~~al~~lH~~~iiHrDiKP~NIll~~~--~~~~l~d~~~~~~~~~~ 164 (277)
T d1o6ya_ 120 ACQALNFSHQNGIIHRDVKPANIMISAT--NAVKVMDFGIARAIADS 164 (277)
T ss_dssp HHHHHHHHHHTTEECCCCSGGGEEEETT--SCEEECCCTTCEECC--
T ss_pred HHHHHHHHHhCCccCccccCcccccCcc--ccceeehhhhhhhhccc
Confidence 55 889999999999999999999865 88999999998876543
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.63 E-value=1.2e-16 Score=174.62 Aligned_cols=142 Identities=15% Similarity=0.149 Sum_probs=100.0
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||.||+|+.+ +|+.||||+.+.... .+.. .. -.+.+|.
T Consensus 47 ~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~----~~~~----------------~~--------------~~~~~E~ 92 (350)
T d1rdqe_ 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV----VKLK----------------QI--------------EHTLNEK 92 (350)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH----HHTT----------------CH--------------HHHHHHH
T ss_pred EEeecCcCcEEEEEEECCCCCEEEEEEEchHHc----cCHH----------------HH--------------HHHHHHH
Confidence 68999999999999976 899999998753111 0000 00 0134565
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
+.+.++. ++. +.+-.++. ....++||||+.|++|.+... ....++...+...+.+++
T Consensus 93 ~il~~l~------------------hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~-~~~~l~e~~~~~i~~qi~~a 153 (350)
T d1rdqe_ 93 RILQAVN------------------FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153 (350)
T ss_dssp HHHTTCC------------------CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH-HHCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHcC------------------CCcEeecccccccccccccccccccccchhhhHh-hcCCCCHHHHHHHHHHHHHH
Confidence 5554432 222 22222333 455689999999999987754 334567666666665555
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|+.||+|||+||+|||++.+ |.++|+|||+++.+..
T Consensus 154 L~yLH~~~iiHRDIKP~NILl~~~--g~ikL~DFG~a~~~~~ 193 (350)
T d1rdqe_ 154 FEYLHSLDLIYRDLKPENLLIDQQ--GYIQVTDFGFAKRVKG 193 (350)
T ss_dssp HHHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECSS
T ss_pred HHHHHhCCEecCcCCHHHcccCCC--CCEEeeeceeeeeccc
Confidence 889999999999999999999865 8999999999988764
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=99.62 E-value=4.9e-16 Score=168.16 Aligned_cols=136 Identities=15% Similarity=0.244 Sum_probs=96.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||.|+||+||+|+.+ +|+.||||+.++.-.+. +.+|+
T Consensus 41 ~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~----------------------------------------~~~Ei 80 (328)
T d3bqca1 41 RKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK----------------------------------------IKREI 80 (328)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSSCHHH----------------------------------------HHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEECHHHHHH----------------------------------------HHHHH
Confidence 67999999999999975 89999999987654332 22355
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
..+.++.+ ++. +.+-.++. ....++||||++|.+|.+.. ..+....+...+.+++
T Consensus 81 ~il~~l~~-----------------hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~----~~l~e~~i~~i~~qil 139 (328)
T d3bqca1 81 KILENLRG-----------------GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEIL 139 (328)
T ss_dssp HHHHHHTT-----------------STTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTT----TSCCHHHHHHHHHHHH
T ss_pred HHHHhccC-----------------CCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHh----cCCCHHHHHHHHHHHH
Confidence 45544431 111 22222332 23478999999999987652 2355665555555554
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+..+|+.||+|||+||+|||++.+ ++.++|+|||++..+.+.
T Consensus 140 ~aL~~LH~~gIvHrDiKp~NILi~~~-~~~vkl~DFG~a~~~~~~ 183 (328)
T d3bqca1 140 KALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYHPG 183 (328)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEEETT-TTEEEECCGGGCEECCTT
T ss_pred HHHHHHhhcccccccccccceEEcCC-CCeeeecccccceeccCC
Confidence 889999999999999999999864 356999999999877643
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=2e-16 Score=167.74 Aligned_cols=142 Identities=18% Similarity=0.212 Sum_probs=97.9
Q ss_pred cccccccceeeEEEEecC-C----CEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLVD-G----RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~-G----~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||+|+||.||+|++++ + ..||||+.++...+.. +.+|
T Consensus 13 ~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~------------------------------------~~~~ 56 (283)
T d1mqba_ 13 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQ------------------------------------RVDF 56 (283)
T ss_dssp EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHH------------------------------------HHHH
T ss_pred eEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHH------------------------------------HHHH
Confidence 679999999999999763 2 3799999876543211 1135
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 163 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~ 163 (864)
.+|++.+.+++| ++ +.+-.+.. ....+++|||++|..+.+.........+...+...+.+
T Consensus 57 ~~E~~il~~l~H------------------~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~ 118 (283)
T d1mqba_ 57 LGEAGIMGQFSH------------------HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRG 118 (283)
T ss_dssp HHHHHHHHTCCC------------------TTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred HHHHHHHHhcCC------------------CCEeeeeEEEecCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHH
Confidence 667777666533 12 11222222 45678999999999988775544445666666666655
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+. +..+|+.|++|||+||+||||+.+ +.++|+|||+++.+...
T Consensus 119 i~~gl~~lH~~~iiHrDlKp~NILl~~~--~~~Kl~DFGla~~~~~~ 163 (283)
T d1mqba_ 119 IAAGMKYLANMNYVHRDLAARNILVNSN--LVCKVSDFGLSRVLEDD 163 (283)
T ss_dssp HHHHHHHHHHTTCCCSCCCGGGEEECTT--CCEEECCCCC-------
T ss_pred HHHhhhhccccccccCccccceEEECCC--CeEEEcccchhhcccCC
Confidence 54 889999999999999999999865 89999999999877553
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=1.4e-16 Score=170.24 Aligned_cols=145 Identities=17% Similarity=0.154 Sum_probs=93.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||+||+|+.+ +|+.||||+.+......... .+ +-.+.+|+
T Consensus 4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~--------------------------~~------~~~~~~Ei 51 (299)
T d1ua2a_ 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKD--------------------------GI------NRTALREI 51 (299)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC--------------------------------------------CTHHHHHH
T ss_pred eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhH--------------------------HH------HHHHHHHH
Confidence 46999999999999976 79999999875432211000 00 11245566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
..+.++.+. .-+.+-.++. .+..+|||||++|..+..+.. ....++...+...+.+++ +
T Consensus 52 ~il~~l~hp-----------------nIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~-~~~~l~~~~~~~~~~qil~aL 113 (299)
T d1ua2a_ 52 KLLQELSHP-----------------NIIGLLDAFGHKSNISLVFDFMETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGL 113 (299)
T ss_dssp HHHHHCCCT-----------------TBCCEEEEECCTTCCEEEEECCSEEHHHHHTT-CCSSCCSSHHHHHHHHHHHHH
T ss_pred HHHHhCCCC-----------------CEeEEEeeeccCCceeehhhhhcchHHhhhhh-cccCCCHHHHHHHHHHHHHHH
Confidence 666555321 1122333333 567889999999976654422 122344344444333333 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+.+|..|++|||+||+|||++.+ +.++|+|||+++.+..
T Consensus 114 ~~lH~~~iiHrDiKp~NIli~~~--~~~KL~DFG~a~~~~~ 152 (299)
T d1ua2a_ 114 EYLHQHWILHRDLKPNNLLLDEN--GVLKLADFGLAKSFGS 152 (299)
T ss_dssp HHHHHTTCCCCCCCGGGEEECTT--CCEEECCCGGGSTTTS
T ss_pred HHhhccceecccCCcceEEecCC--CccccccCccccccCC
Confidence 88999999999999999999865 8999999999987654
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.61 E-value=3.4e-16 Score=166.71 Aligned_cols=138 Identities=19% Similarity=0.308 Sum_probs=97.6
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||+||+|+.. +|+.||||+...... .-.+.+|+
T Consensus 11 ~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---------------------------------------~~~~~~e~ 51 (293)
T d1csna_ 11 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD---------------------------------------APQLRDEY 51 (293)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEECCTT---------------------------------------SCCHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEccccC---------------------------------------cHHHHHHH
Confidence 67999999999999976 799999998643211 01234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+..+.+. ..+|.++. ....++||||+ |.+|.+.............+...+.+++
T Consensus 52 ~~~~~l~~~-------------------~~i~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~ 111 (293)
T d1csna_ 52 RTYKLLAGC-------------------TGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQML 111 (293)
T ss_dssp HHHHHTTTC-------------------TTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHhcCC-------------------CCCCEEEEEeecCCccEEEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHH
Confidence 555554331 12334432 56678999999 6677776554444566666555555544
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccC---CCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKD---PPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~---~~g~i~LiDFG~~~~l~~ 207 (864)
++.+|+.||+|||+||+|||++.. .++.++|+|||+++.+.+
T Consensus 112 ~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~ 158 (293)
T d1csna_ 112 ARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 158 (293)
T ss_dssp HHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred HHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEccc
Confidence 889999999999999999999742 247899999999987643
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=6.3e-16 Score=167.14 Aligned_cols=140 Identities=18% Similarity=0.149 Sum_probs=95.7
Q ss_pred cccccccceeeEEEEec-CC-----CEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV-DG-----RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G-----~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||+|+||.||+|+.+ .+ ..||||+........ ..-.
T Consensus 43 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 86 (325)
T d1rjba_ 43 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSS------------------------------------EREA 86 (325)
T ss_dssp EEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------------------------------------------CHH
T ss_pred eEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHH------------------------------------HHHH
Confidence 57999999999999975 23 369999876543211 0112
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh-----------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA----------- 149 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~----------- 149 (864)
+.+|.+.+.++.. +++ |-+++. ....+|||||++|++|.++.....
T Consensus 87 ~~~E~~~l~~l~~-----------------Hpn--Iv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~ 147 (325)
T d1rjba_ 87 LMSELKMMTQLGS-----------------HEN--IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYE 147 (325)
T ss_dssp HHHHHHHHHHHCC-----------------CTT--BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC--------
T ss_pred HHHHHHHHHHhcC-----------------CCc--EeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhc
Confidence 4556766666521 122 223332 566889999999999988764321
Q ss_pred -----------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 150 -----------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 150 -----------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..++...+...+.++. +..+|+.||+|||+||+||+++.+ +.++|+|||+++....
T Consensus 148 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~--~~~Kl~DFGla~~~~~ 216 (325)
T d1rjba_ 148 NQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHG--KVVKICDFGLARDIMS 216 (325)
T ss_dssp -------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETT--TEEEECCCGGGSCGGG
T ss_pred cccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccC--CeEEEeeccccccccC
Confidence 1244455555555544 888999999999999999999865 8999999999876544
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=1.7e-16 Score=169.10 Aligned_cols=148 Identities=18% Similarity=0.196 Sum_probs=101.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||.||+|+.+ +|+.||||+.+........ ... ..-++.+|+
T Consensus 16 ~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~-----------------~~~--------------~~~~~~~E~ 64 (293)
T d1jksa_ 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR-----------------RGV--------------SREDIEREV 64 (293)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCS-----------------SSB--------------CHHHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhh-----------------hhH--------------HHHHHHHHH
Confidence 67999999999999975 8999999987533211000 000 001245577
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--H
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 166 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l 166 (864)
+.+.++++.. -+.+-.++. ....+|||||++|++|.++... ...++...+...+.+++ +
T Consensus 65 ~il~~l~Hpn-----------------Iv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~-~~~l~~~~~~~~~~qi~~al 126 (293)
T d1jksa_ 65 SILKEIQHPN-----------------VITLHEVYENKTDVILILELVAGGELFDFLAE-KESLTEEEATEFLKQILNGV 126 (293)
T ss_dssp HHHHHCCCTT-----------------BCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCC-----------------CCcEEEEEEECCEEEEEEEcCCCccccchhcc-ccccchhHHHHHHHHHHHHH
Confidence 6666653310 122223333 4567899999999999987643 34567666665555544 8
Q ss_pred HHHHhcCeeccCCCCCCeEEccCCC--CceEEEecccccccCh
Q 002927 167 HQIYVDGFFNGDPHPGNFLVSKDPP--HRPILLDFGLTKKLSS 207 (864)
Q Consensus 167 ~~i~~~G~~H~D~hPgNIlv~~~~~--g~i~LiDFG~~~~l~~ 207 (864)
..+|+.|++|||+||.|||++.++. ..++|+|||++..++.
T Consensus 127 ~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~ 169 (293)
T d1jksa_ 127 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 169 (293)
T ss_dssp HHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTT
T ss_pred HhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCC
Confidence 8899999999999999999986521 3599999999987754
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=1.7e-16 Score=169.49 Aligned_cols=138 Identities=15% Similarity=0.155 Sum_probs=95.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+-||+|++|.||+|+.+ +|+.||||+.+...... + ..-.+.+|.
T Consensus 8 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~---~--------------------------------~~~~~~~Ei 52 (298)
T d1gz8a_ 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE---G--------------------------------VPSTAIREI 52 (298)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEC------------------------------------------CCHHHHHHH
T ss_pred cEEecCcCeEEEEEEECCCCCEEEEEEEehhhcCh---H--------------------------------HHHHHHHHH
Confidence 56999999999999975 89999999876432110 0 001244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+ + .|.+++. ....+|||||++|..+.........+++...+...+.+++
T Consensus 53 ~il~~l~H------------------p--~Iv~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil 112 (298)
T d1gz8a_ 53 SLLKELNH------------------P--NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL 112 (298)
T ss_dssp HHHTTCCC------------------T--TBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------C--cEEEeccccccccceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHH
Confidence 55554422 1 2333432 5667899999988655443333344567777666666655
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
++.+|+.||+|||+||+|||++.+ +.++|+|||+++..
T Consensus 113 ~~L~yLH~~~IiHrDiKpeNIl~~~~--~~~kl~DFG~a~~~ 152 (298)
T d1gz8a_ 113 QGLAFCHSHRVLHRDLKPQNLLINTE--GAIKLADFGLARAF 152 (298)
T ss_dssp HHHHHHHHTTCCCSCCCGGGEEECTT--SCEEECSTTHHHHH
T ss_pred HHHHHhhcCCEEccccCchheeeccc--CcceeccCCcceec
Confidence 889999999999999999999865 89999999988654
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=6.2e-16 Score=162.96 Aligned_cols=140 Identities=18% Similarity=0.206 Sum_probs=94.1
Q ss_pred cccccccceeeEEEEecC----CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLVD----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|+||+||+|+... +..||||+.+....+... -.|.
T Consensus 13 ~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~------------------------------------~~~~ 56 (273)
T d1mp8a_ 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR------------------------------------EKFL 56 (273)
T ss_dssp EEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHH------------------------------------HHHH
T ss_pred EEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHH------------------------------------HHHH
Confidence 689999999999999752 356888887654332111 1245
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 163 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~ 163 (864)
+|++.+.+++| ++ |-+++. ....+|||||++|.++.++.......++...+...+.+
T Consensus 57 ~E~~~l~~l~H------------------pn--Iv~l~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~q 116 (273)
T d1mp8a_ 57 QEALTMRQFDH------------------PH--IVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 116 (273)
T ss_dssp HHHHHHHTCCC------------------TT--BCCEEEEECSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHH
T ss_pred HHHHHHHhCCC------------------CC--EeeEEEEEecCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHH
Confidence 67776666532 22 223332 56678999999999998875544555676666665555
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+. +..+|+.|++|||+||.||+++.+ +.++|+|||+++.++..
T Consensus 117 i~~gl~ylH~~~iiHrDlKp~NIll~~~--~~~Kl~DfG~a~~~~~~ 161 (273)
T d1mp8a_ 117 LSTALAYLESKRFVHRDIAARNVLVSSN--DCVKLGDFGLSRYMEDS 161 (273)
T ss_dssp HHHHHHHHHHTTCCCSCCSGGGEEEEET--TEEEECC----------
T ss_pred HHHHhhhhcccCeeccccchhheeecCC--CcEEEccchhheeccCC
Confidence 54 888999999999999999999976 89999999999877543
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=6.5e-16 Score=164.93 Aligned_cols=141 Identities=18% Similarity=0.159 Sum_probs=87.6
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||+|+||+||+|+.+ +++.||||+.+.+..... . -.
T Consensus 19 ~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~---~---------------------------------~~ 62 (299)
T d1ywna1 19 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE---H---------------------------------RA 62 (299)
T ss_dssp EEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHH---H---------------------------------HH
T ss_pred eEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHH---H---------------------------------HH
Confidence 68999999999999963 357899998764332110 0 01
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe--cCCceEEEeecCCcCCCChHHHhh------------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ--SSETVLILEFMDGIRLNDCESLEA------------ 149 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~--~~~~vLvmE~i~G~~L~~~~~~~~------------ 149 (864)
+..|...+.++.+ ++.+ .+-.... ....++||||++|++|.++.....
T Consensus 63 ~~~e~~~l~~~~~-----------------h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~ 125 (299)
T d1ywna1 63 LMSELKILIHIGH-----------------HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 125 (299)
T ss_dssp HHHHHHHHHHHCC-----------------CTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-------
T ss_pred HHHHHHHHHhhcC-----------------CCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhh
Confidence 3334444444422 1122 1111112 234689999999999998865322
Q ss_pred ---cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccC
Q 002927 150 ---FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 206 (864)
Q Consensus 150 ---~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 206 (864)
..++...+...+.++. +..+|+.||+|||+||.|||++.+ +.++|+|||+++.+.
T Consensus 126 ~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~--~~~Kl~DFGla~~~~ 185 (299)
T d1ywna1 126 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLARDIY 185 (299)
T ss_dssp ----CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGG--GCEEECC------CC
T ss_pred hhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCC--CcEEEccCcchhhcc
Confidence 1244555555555544 788999999999999999999865 899999999987654
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=7.7e-16 Score=167.06 Aligned_cols=145 Identities=17% Similarity=0.138 Sum_probs=98.4
Q ss_pred cccccc--ccccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhH
Q 002927 4 MFMDFV--ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 80 (864)
Q Consensus 4 ~F~~fd--~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~ 80 (864)
+.+.++ .+.||+|++|.||+|+.+ +|+.||||+.+..- .
T Consensus 9 i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~--~------------------------------------ 50 (335)
T d2ozaa1 9 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP--K------------------------------------ 50 (335)
T ss_dssp GGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECSH--H------------------------------------
T ss_pred cccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCcH--H------------------------------------
Confidence 334444 357999999999999975 89999999975321 1
Q ss_pred hhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-----cCCceEEEeecCCcCCCChHHHhh-cCCC
Q 002927 81 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEA-FGVN 153 (864)
Q Consensus 81 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-----~~~~vLvmE~i~G~~L~~~~~~~~-~~~~ 153 (864)
+.+|...+.++.+ ++. +.+-.++. ....+||||||+|++|.++..... ..++
T Consensus 51 ----~~~E~~~~~~~~~-----------------hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~ 109 (335)
T d2ozaa1 51 ----ARREVELHWRASQ-----------------CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFT 109 (335)
T ss_dssp ----HHHHHHHHHHHTT-----------------STTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEE
T ss_pred ----HHHHHHHHHHhcC-----------------CCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcC
Confidence 1224433333311 122 22333332 133689999999999988754221 2355
Q ss_pred HHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCC-CCceEEEecccccccCh
Q 002927 154 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSS 207 (864)
Q Consensus 154 ~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~ 207 (864)
...+...+.+++ +..+|..|++|||+||+|||++.+. ++.++|+|||+++.+..
T Consensus 110 e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~ 166 (335)
T d2ozaa1 110 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 166 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeeccC
Confidence 555555555554 8889999999999999999998532 36799999999987654
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=2.1e-15 Score=162.57 Aligned_cols=143 Identities=16% Similarity=0.148 Sum_probs=97.3
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|.||+|+.+ +|+.||||+.++... ..+- ... .+.+|.
T Consensus 8 ~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~---~~~~-----------------~~~--------------~~~~e~ 53 (320)
T d1xjda_ 8 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV---LMDD-----------------DVE--------------CTMVEK 53 (320)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEHHHH---HHTT-----------------CHH--------------HHHHHH
T ss_pred eEEecCCCcEEEEEEECCCCCEEEEEEEchhhc---cChH-----------------HHH--------------HHHHHH
Confidence 68999999999999986 899999999764211 0000 000 122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+.+ .+. ++. +.+-.++. ....+|||||++|++|.++.. .....+...+...+.+++
T Consensus 54 ~~l~~---~~~--------------hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~-~~~~~~e~~~~~~~~qi~~a 115 (320)
T d1xjda_ 54 RVLSL---AWE--------------HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ-SCHKFDLSRATFYAAEIILG 115 (320)
T ss_dssp HHHHH---HTT--------------CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHH
T ss_pred HHHHH---hCC--------------CCcEEEEEEEEccCCceeEEEeecCCCcHHHHhh-ccCCCCHHHHHHHHHHHHHH
Confidence 32222 111 222 22222222 455789999999999998764 334566666655555544
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++.+|+.|++|||+||.|||++++ |+++|+|||+++.+..
T Consensus 116 l~ylH~~~iiHrDikp~NiL~~~~--~~~kl~DFG~a~~~~~ 155 (320)
T d1xjda_ 116 LQFLHSKGIVYRDLKLDNILLDKD--GHIKIADFGMCKENML 155 (320)
T ss_dssp HHHHHHTTCBCCCCCGGGEEECTT--SCEEECCCTTCBCCCC
T ss_pred HHHHHhCCeeeccCcccceeecCC--Cceeccccchhhhccc
Confidence 889999999999999999999865 8999999999987653
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.57 E-value=2.1e-15 Score=164.36 Aligned_cols=141 Identities=13% Similarity=0.114 Sum_probs=96.9
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.++.-..... + .+.+|.
T Consensus 14 ~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~------------------------------~------~~~~Ei 57 (345)
T d1pmea_ 14 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC------------------------------Q------RTLREI 57 (345)
T ss_dssp EECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHH------------------------------H------HHHHHH
T ss_pred EEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHH------------------------------H------HHHHHH
Confidence 67999999999999975 8999999997653221100 0 134566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
..+.++.+.. .+.+-.++. ....+++||++.|.+|.++.. ..+++...+...+.++
T Consensus 58 ~il~~l~hp~-----------------iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~--~~~l~~~~i~~i~~qi 118 (345)
T d1pmea_ 58 KILLRFRHEN-----------------IIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLK--TQHLSNDHICYFLYQI 118 (345)
T ss_dssp HHHHHCCCTT-----------------BCCCCEEECCSSTTTCCCEEEEEECCCEEHHHHHH--HCCCCHHHHHHHHHHH
T ss_pred HHHHHcCCCC-----------------CCcEEEEEeeccccccceEEEEEeecCCchhhhhh--cCCCCHHHHHHHHHHH
Confidence 6666653311 122222322 224466677788999988753 4567777766666665
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+ +..+|+.||+|||+||+|||++.+ +.++|+|||++..+...
T Consensus 119 l~al~yLH~~~iiHRDIKp~NILl~~~--~~~kl~DfG~a~~~~~~ 162 (345)
T d1pmea_ 119 LRGLKYIHSANVLHRDLKPSNLLLNTT--CDLKICDFGLARVADPD 162 (345)
T ss_dssp HHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEECCGG
T ss_pred HHHHHHHHHCCCcCCCCCcceEEECCC--CCEEEcccCceeeccCC
Confidence 5 889999999999999999999865 89999999999877654
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.57 E-value=9.8e-16 Score=163.52 Aligned_cols=138 Identities=20% Similarity=0.321 Sum_probs=95.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||.||+|+.. +|+.||||+.+.... +-.+.+|+
T Consensus 13 ~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---------------------------------------~~~~~~E~ 53 (299)
T d1ckia_ 13 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---------------------------------------HPQLHIES 53 (299)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEESCTT---------------------------------------SCCHHHHH
T ss_pred EEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc---------------------------------------CHHHHHHH
Confidence 67999999999999975 799999998764321 01234566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~ 165 (864)
+.+.++.+. .. |+.++. ....++||||++|. +.+........++...+...+.+++
T Consensus 54 ~i~~~l~~~-----------------~~--i~~~~~~~~~~~~~~ivme~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~ 113 (299)
T d1ckia_ 54 KIYKMMQGG-----------------VG--IPTIRWCGAEGDYNVMVMELLGPS-LEDLFNFCSRKFSLKTVLLLADQMI 113 (299)
T ss_dssp HHHHHSTTS-----------------TT--CCCEEEEEEETTEEEEEEECCCCB-HHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHccCC-----------------Cc--ccEEEEEEecCCEEEEEEEEcCCc-hhhhhhhccCCCcHHHHHHHHHHHH
Confidence 555554321 11 222222 45678999999654 4343333344567777766666655
Q ss_pred --HHHHHhcCeeccCCCCCCeEEccC-CCCceEEEecccccccCh
Q 002927 166 --AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 --l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~ 207 (864)
++.+|+.||+|||+||+|||+... .+..++|+|||+++.+..
T Consensus 114 ~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~ 158 (299)
T d1ckia_ 114 SRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 158 (299)
T ss_dssp HHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBC
T ss_pred HHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccc
Confidence 889999999999999999998632 235799999999987653
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.57 E-value=1.9e-15 Score=159.18 Aligned_cols=142 Identities=17% Similarity=0.125 Sum_probs=95.8
Q ss_pred cccccccceeeEEEEec--CC--CEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV--DG--RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~--~G--~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+-||+|+||+||+|+++ ++ .+||||+..+.....- +. .-+|.
T Consensus 14 ~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~----------------------------~~------~~~~~ 59 (273)
T d1u46a_ 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQP----------------------------EA------MDDFI 59 (273)
T ss_dssp EECC----CCCEEEEEECTTSCEEEEEEEC--------C----------------------------HH------HHHHH
T ss_pred EEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCH----------------------------HH------HHHHH
Confidence 56999999999999964 33 3789998654332110 00 01256
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 163 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~ 163 (864)
+|++.+.+++| ++ |-+++. ....+|||||+++.++.+........+....+...+.+
T Consensus 60 ~Ei~~l~~l~H------------------~n--Iv~~~g~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~q 119 (273)
T d1u46a_ 60 REVNAMHSLDH------------------RN--LIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 119 (273)
T ss_dssp HHHHHHHHCCC------------------TT--BCCEEEEECSSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHH
T ss_pred HHHHHHHhCCC------------------CC--EEEEEEEEeecchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHH
Confidence 67777666633 11 233443 45678999999999988876655555777777776666
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+. +..+|+.|++|||+||.||+++.+ +.++|+|||++..+...
T Consensus 120 i~~gl~ylH~~~iiHrDikp~NIll~~~--~~vkl~DfGl~~~~~~~ 164 (273)
T d1u46a_ 120 VAEGMGYLESKRFIHRDLAARNLLLATR--DLVKIGDFGLMRALPQN 164 (273)
T ss_dssp HHHHHHHHHHTTEECSCCCGGGEEEEET--TEEEECCCTTCEECCC-
T ss_pred HHHHHHHhhhCCEeeeeecHHHhccccc--cceeeccchhhhhcccC
Confidence 55 889999999999999999999976 89999999999987554
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=1.9e-15 Score=162.70 Aligned_cols=140 Identities=18% Similarity=0.173 Sum_probs=98.8
Q ss_pred cccccccceeeEEEEec-CCC----EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccH
Q 002927 11 TPLATASIAQVHRATLV-DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 85 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~----~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 85 (864)
+.||+|+||+||+|+.. +|+ +||||..++...... +-.|
T Consensus 15 ~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~~ 58 (317)
T d1xkka_ 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA------------------------------------NKEI 58 (317)
T ss_dssp EEEEECSSEEEEEEEECC----CCEEEEEEEECC----CT------------------------------------HHHH
T ss_pred eEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHH------------------------------------HHHH
Confidence 68999999999999975 665 588887664322110 1125
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---ecCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 86 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 86 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
.+|++.+.+++| ++ |.+++ .....+++|||+.|.+|.+.........+...+...+.
T Consensus 59 ~~E~~~l~~l~H------------------pn--Iv~l~g~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~ 118 (317)
T d1xkka_ 59 LDEAYVMASVDN------------------PH--VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 118 (317)
T ss_dssp HHHHHHHHHCCC------------------TT--BCCEEEEEESSSEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHH
T ss_pred HHHHHHHHhCCC------------------CC--EeeEEEEEecCCeeEEEEeccCCcccccccccccCCCHHHHHHHHH
Confidence 567777776543 11 22333 25677899999999998877554455566666666555
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
++. +..+|..|++|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 119 qi~~gl~yLH~~~iiHrDlKp~NIll~~~--~~~kl~DFGla~~~~~~ 164 (317)
T d1xkka_ 119 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAE 164 (317)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEEEET--TEEEECCCSHHHHTTTT
T ss_pred HHHHHHHHHHHcCcccCcchhhcceeCCC--CCeEeeccccceecccc
Confidence 554 888999999999999999999975 89999999999877554
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=1.5e-15 Score=159.90 Aligned_cols=148 Identities=19% Similarity=0.170 Sum_probs=98.7
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||.||+|+.+ +|+.||||+.+...... . ........+.+|.
T Consensus 10 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~-----------------------~--------~~~~~~~~~~~E~ 58 (273)
T d1xwsa_ 10 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD-----------------------W--------GELPNGTRVPMEV 58 (273)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCC-----------------------E--------EECTTCCEEEHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccc-----------------------h--------hhhhHHHHHHHHH
Confidence 67999999999999975 89999999875421100 0 0000112244577
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCc-CCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGI-RLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~-~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
..+.++.+. +++ +.+-.++. ....++||||++|. .+.+... ....++...+...+.+++
T Consensus 59 ~il~~l~~~----------------h~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~-~~~~l~e~~~~~~~~qi~~ 121 (273)
T d1xwsa_ 59 VLLKKVSSG----------------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLE 121 (273)
T ss_dssp HHHHHHCSS----------------SCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHH-HHCSCCHHHHHHHHHHHHH
T ss_pred HHHHHhccC----------------CCCccEEEEEEeeCCeEEEEEEeccCcchHHHHHh-ccCCCCHHHHHHHHHHHHH
Confidence 776665321 111 22222333 45678999999874 4444432 344566666665555554
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+..+|+.|++|||+||+|||++.+ ++.++|+|||++.....
T Consensus 122 al~~lH~~~iiHrDiKp~NIll~~~-~~~vkl~DFG~a~~~~~ 163 (273)
T d1xwsa_ 122 AVRHCHNCGVLHRDIKDENILIDLN-RGELKLIDFGSGALLKD 163 (273)
T ss_dssp HHHHHHHTTEECSCCSGGGEEEETT-TTEEEECCCTTCEECCS
T ss_pred HHHHHHHCCCccccCcccceEEecC-CCeEEECccccceeccc
Confidence 889999999999999999999854 47899999999886654
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=99.56 E-value=7.3e-16 Score=163.43 Aligned_cols=139 Identities=14% Similarity=0.106 Sum_probs=99.3
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|+||.||+|+.++|+.||||+.+...... ..+-.+.+|+.
T Consensus 8 ~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~-----------------------------------~~~~~~~~E~~ 52 (286)
T d1ob3a_ 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDE-----------------------------------GIPSTTIREIS 52 (286)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSGGG-----------------------------------CCCHHHHHHHH
T ss_pred cEEecCCCcEEEEEEeCCCCEEEEEEEehhhcCh-----------------------------------HHHHHHHHHHH
Confidence 6799999999999999899999999875432110 00112445666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH-
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 165 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~- 165 (864)
.++++++ + .|.+++. .+..+++||++.|..+..+.. ....++...+...+.+++
T Consensus 53 il~~l~h------------------p--nIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~-~~~~l~~~~~~~i~~qi~~ 111 (286)
T d1ob3a_ 53 ILKELKH------------------S--NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV-CEGGLESVTAKSFLLQLLN 111 (286)
T ss_dssp GGGGCCC------------------T--TBCCEEEEEECSSCEEEEEECCSEEHHHHHHT-STTCCCHHHHHHHHHHHHH
T ss_pred HHHhCCC------------------C--cEEeeeeecccCCceeEEEEeehhhhHHHHHh-hcCCcchhhhHHHHHHHHH
Confidence 6555432 1 1223332 677889999999876665532 234566666655555544
Q ss_pred -HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++.+|+.||+|||+||+|||++.+ +.++|+|||++..+..
T Consensus 112 ~L~~LH~~~IvHrDiKp~NIll~~~--~~~kl~DfG~a~~~~~ 152 (286)
T d1ob3a_ 112 GIAYCHDRRVLHRDLKPQNLLINRE--GELKIADFGLARAFGI 152 (286)
T ss_dssp HHHHHHHTTCCCSCCCGGGEEECTT--SCEEECCTTHHHHHCC
T ss_pred HHHHhccCcEEecCCCCceeeEcCC--CCEEecccccceeccc
Confidence 889999999999999999999865 8999999999887654
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.55 E-value=2.6e-15 Score=160.38 Aligned_cols=142 Identities=18% Similarity=0.173 Sum_probs=98.0
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||+|+||.||+|+.+ +++.||||+.+........ -+
T Consensus 19 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~------------------------------------~~ 62 (301)
T d1lufa_ 19 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ------------------------------------AD 62 (301)
T ss_dssp EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHH------------------------------------HH
T ss_pred EEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHH------------------------------------HH
Confidence 67999999999999964 4678999998765433211 12
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-cCCceEEEeecCCcCCCChHHHhh-------------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEA------------- 149 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~------------- 149 (864)
|.+|+..+.+++| +++ .+-..+. ....+++|||+++.+|.++.....
T Consensus 63 ~~~E~~il~~l~h------------------~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~ 124 (301)
T d1lufa_ 63 FQREAALMAEFDN------------------PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLS 124 (301)
T ss_dssp HHHHHHHHHTCCC------------------TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC------------
T ss_pred HHHHHHHHHhcCC------------------CCcccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccc
Confidence 4567766665532 121 1112222 567889999999999988754211
Q ss_pred ----------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 150 ----------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 150 ----------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
..+....+...+.++. ++.+|..|++|||+||.|||++.+ +.++|+|||+++.+.+.
T Consensus 125 ~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~--~~~Kl~DFGls~~~~~~ 193 (301)
T d1lufa_ 125 TRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGEN--MVVKIADFGLSRNIYSA 193 (301)
T ss_dssp ----------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG--GCEEECCCSCHHHHTGG
T ss_pred hhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCC--CcEEEccchhheeccCC
Confidence 1233444444443433 788999999999999999999865 89999999998876554
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=4.5e-15 Score=161.70 Aligned_cols=140 Identities=20% Similarity=0.302 Sum_probs=90.2
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||.||+|+.+ +|+.||||+.+....... ..+. +.+|.
T Consensus 24 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~-----------------------------~~~~------~~~Ei 68 (346)
T d1cm8a_ 24 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL-----------------------------FAKR------AYREL 68 (346)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSSTTSSHH-----------------------------HHHH------HHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChH-----------------------------HHHH------HHHHH
Confidence 67999999999999975 799999999764332110 0011 33455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 162 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~ 162 (864)
+.+.++.+. .-+.+-.++. ....+|||||+ |..+.++. ....++...+...+.
T Consensus 69 ~il~~l~hp-----------------niv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~--~~~~l~~~~~~~~~~ 128 (346)
T d1cm8a_ 69 RLLKHMRHE-----------------NVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLM--KHEKLGEDRIQFLVY 128 (346)
T ss_dssp HHHHHCCBT-----------------TBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHH--HHCCCCHHHHHHHHH
T ss_pred HHHHhcCCC-----------------CeeEEEEEeccCccccccceEEEEEecc-cccHHHHH--HhccccHHHHHHHHH
Confidence 555554321 0112222222 12458999999 55555543 345677766666555
Q ss_pred HHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 163 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 163 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+++ +..+|+.||+|||+||+|||++.+ +.++++|||++...+.
T Consensus 129 qi~~aL~~LH~~~IiHrDiKp~NIL~~~~--~~~kl~Dfg~a~~~~~ 173 (346)
T d1cm8a_ 129 QMLKGLRYIHAAGIIHRDLKPGNLAVNED--CELKILDFGLARQADS 173 (346)
T ss_dssp HHHHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEECCS
T ss_pred HHHHHHHHHHhCCCcccccCcchhhcccc--cccccccccceeccCC
Confidence 554 888999999999999999999865 8999999999987764
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=4e-15 Score=162.42 Aligned_cols=138 Identities=21% Similarity=0.167 Sum_probs=92.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||.||+|+.+ +|+.||||+.+.+-. ...+|.
T Consensus 26 k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-----------------------------------------~~~~Ei 64 (350)
T d1q5ka_ 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----------------------------------------FKNREL 64 (350)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-----------------------------------------SCCHHH
T ss_pred eEEeeCcCeEEEEEEECCCCCEEEEEEECccch-----------------------------------------HHHHHH
Confidence 56999999999999986 799999998754311 012355
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-c------CCceEEEeecCCcCCCChHHH--hhcCCCHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S------SETVLILEFMDGIRLNDCESL--EAFGVNKQKVVEE 160 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~------~~~vLvmE~i~G~~L~~~~~~--~~~~~~~~~l~~~ 160 (864)
+.+.++++. .-+.+..++. . ...+|||||++|..+..+... ....++...+...
T Consensus 65 ~il~~l~h~-----------------niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i 127 (350)
T d1q5ka_ 65 QIMRKLDHC-----------------NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127 (350)
T ss_dssp HHHHHCCCT-----------------TBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred HHHHhcCCC-----------------CCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHH
Confidence 555444221 1122333332 1 114799999988654444322 2234555555444
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
+.+++ ++.+|+.||+|||+||+|||++.+ +..++|+|||++..+..
T Consensus 128 ~~qil~aL~yLH~~~IiHrDiKp~NILl~~~-~~~~kl~DFG~a~~~~~ 175 (350)
T d1q5ka_ 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVR 175 (350)
T ss_dssp HHHHHHHHHHHHTTTEECCCCCGGGEEECTT-TCCEEECCCTTCEECCT
T ss_pred HHHHHHHHHHHHhcCCcccCCCcceEEEecC-CCceeEecccchhhccC
Confidence 44444 889999999999999999999865 24789999999987754
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=4.3e-15 Score=159.21 Aligned_cols=143 Identities=17% Similarity=0.216 Sum_probs=98.1
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||+|+||.||+|+++ +++.||||+.+...... .+..
T Consensus 26 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~------------------------------------~~~~ 69 (308)
T d1p4oa_ 26 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR------------------------------------ERIE 69 (308)
T ss_dssp EEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHH------------------------------------HHHH
T ss_pred eEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChH------------------------------------HHHH
Confidence 67999999999999974 36789999876543221 1112
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-cCCceEEEeecCCcCCCChHHHhh---------cCCCH
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA---------FGVNK 154 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~---------~~~~~ 154 (864)
|.+|+..+.++.+. .-+.+-.+.. ....+|||||++|++|.++..... ...+.
T Consensus 70 ~~~E~~il~~l~h~-----------------nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 132 (308)
T d1p4oa_ 70 FLNEASVMKEFNCH-----------------HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 132 (308)
T ss_dssp HHHHHHHGGGCCCT-----------------TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCH
T ss_pred HHHHHHHHHHcCCC-----------------CEeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCH
Confidence 55677666654321 1122222222 567899999999999988754322 11244
Q ss_pred HHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 155 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 155 ~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
..+...+.++. +..+|..+++|||+||.|||++.+ ++++|+|||+++.+...
T Consensus 133 ~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~--~~~Kl~DFGla~~~~~~ 186 (308)
T d1p4oa_ 133 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED--FTVKIGDFGMTRDIYET 186 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTT--CCEEECCTTCCCGGGGG
T ss_pred HHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCC--ceEEEeecccceeccCC
Confidence 44444444433 888999999999999999999865 89999999999876543
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=6.6e-15 Score=160.38 Aligned_cols=142 Identities=20% Similarity=0.244 Sum_probs=96.4
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||.||+|+.+ +|+.||||+.+......... -.+.+|+
T Consensus 24 ~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~-----------------------------------~~~~~Ei 68 (348)
T d2gfsa1 24 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-----------------------------------KRTYREL 68 (348)
T ss_dssp EECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHH-----------------------------------HHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHH-----------------------------------HHHHHHH
Confidence 67999999999999975 89999999976443211100 0134566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 163 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~ 163 (864)
+.+.++.+. ..+.+-.++. ....+++|||+.|.+|.++. ...+++...+...+.+
T Consensus 69 ~il~~l~h~-----------------~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~--~~~~l~e~~~~~i~~q 129 (348)
T d2gfsa1 69 RLLKHMKHE-----------------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQ 129 (348)
T ss_dssp HHHHHCCCT-----------------TBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHH--TTCCCCHHHHHHHHHH
T ss_pred HHHHhcCCC-----------------CeeeEEEEEeeccccccCceEEEEEeecCCchhhhc--ccccccHHHHHHHHHH
Confidence 666665321 1122333332 23457788888999998874 3445776666665555
Q ss_pred HH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 164 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 164 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
++ +..+|+.||+|||+||+|||++.+ |.++++|||++......
T Consensus 130 il~aL~~LH~~giiHrDiKp~NILi~~~--~~~kl~dfg~a~~~~~~ 174 (348)
T d2gfsa1 130 ILRGLKYIHSADIIHRDLKPSNLAVNED--CELKILDFGLARHTDDE 174 (348)
T ss_dssp HHHHHHHHHHTTCCCCCCCGGGEEECTT--CCEEECCC----CCTGG
T ss_pred HHHHHHHHHhCCCcccccCCcccccccc--ccccccccchhcccCcc
Confidence 55 889999999999999999999865 89999999998776544
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=5.4e-15 Score=158.65 Aligned_cols=140 Identities=14% Similarity=0.174 Sum_probs=99.1
Q ss_pred cccccccceeeEEEEec------CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 11 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 11 ~plasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
+.||+|+||.||+|+++ +++.||||+.++...... +..
T Consensus 29 ~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~------------------------------------~~~ 72 (311)
T d1t46a_ 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE------------------------------------REA 72 (311)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHH------------------------------------HHH
T ss_pred eEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHH------------------------------------HHH
Confidence 67999999999999862 467999999886543211 112
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCChHHHhh-----------
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA----------- 149 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~~~~~~~----------- 149 (864)
|.+|+..+.++.+ +++| -+++. ....+|+|||++|.+|.++.....
T Consensus 73 ~~~E~~~~~~l~~-----------------HpnI--v~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~ 133 (311)
T d1t46a_ 73 LMSELKVLSYLGN-----------------HMNI--VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPA 133 (311)
T ss_dssp HHHHHHHHHHHCC-----------------CTTB--CCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------
T ss_pred HHHHHHHHHhccC-----------------CCCE--EEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccc
Confidence 5567766666521 2222 23332 345799999999999888754321
Q ss_pred ------cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 150 ------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 150 ------~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..++...+...+.+++ +..+|..|++|||+||.||+++.+ +.++++|||+++.+..
T Consensus 134 ~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~--~~~ki~DfG~~~~~~~ 197 (311)
T d1t46a_ 134 IMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG--RITKICDFGLARDIKN 197 (311)
T ss_dssp ------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETT--TEEEECCCGGGSCTTS
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccccccccc--CcccccccchheeccC
Confidence 1244455555454444 888999999999999999999865 8999999999987654
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=6.9e-15 Score=157.76 Aligned_cols=140 Identities=15% Similarity=0.196 Sum_probs=96.1
Q ss_pred cccccccceeeEEEEecC--CC--EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLVD--GR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~--G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|+||.||+|++.+ ++ .||||+.+......- . -+|.
T Consensus 33 ~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~---~---------------------------------~~~~ 76 (311)
T d1r0pa_ 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE---V---------------------------------SQFL 76 (311)
T ss_dssp EEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHH---H---------------------------------HHHH
T ss_pred eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHH---H---------------------------------HHHH
Confidence 569999999999999753 22 589998754322110 0 1255
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-----cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 161 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~ 161 (864)
+|++.+.+++|. + |-+++. ....++||||++|.+|.++........+...+...+
T Consensus 77 ~E~~~l~~l~Hp------------------n--Iv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~ 136 (311)
T d1r0pa_ 77 TEGIIMKDFSHP------------------N--VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG 136 (311)
T ss_dssp HHHHHHHTCCCT------------------T--BCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHH
T ss_pred HHHHHHHhCCCC------------------C--EeEEeEEEEecCCceEEEEEEeecCchhhhhccccccchHHHHHHHH
Confidence 677776665431 1 112221 245689999999999988765444444455444444
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
.++. +..+|..|++|||+||.|||++++ +.++|+|||+++.+...
T Consensus 137 ~qia~gL~~lH~~~iiHrDLK~~NILl~~~--~~~kL~DFG~~~~~~~~ 183 (311)
T d1r0pa_ 137 LQVAKGMKFLASKKFVHRDLAARNCMLDEK--FTVKVADFGLARDMYDK 183 (311)
T ss_dssp HHHHHHHHHHHHTTCCCSCCSGGGEEECTT--CCEEECSSGGGCCTTTT
T ss_pred HHHHHhhhhhcccCcccCCccHHhEeECCC--CCEEEecccchhhcccc
Confidence 4433 778999999999999999999865 89999999999877653
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=6.9e-15 Score=157.69 Aligned_cols=147 Identities=18% Similarity=0.181 Sum_probs=97.6
Q ss_pred cccc-ccccccccceeeEEEEec-CCC--EEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHh
Q 002927 6 MDFV-ETPLATASIAQVHRATLV-DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 81 (864)
Q Consensus 6 ~~fd-~~plasaSigqV~~A~l~-~G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (864)
++|+ .+.||+|+||.||+|+++ +|. .||||..+....+..
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------ 53 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD------------------------------------ 53 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-----------------------------------------
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHH------------------------------------
Confidence 3444 378999999999999986 565 466776544322110
Q ss_pred hccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHh-----------
Q 002927 82 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLE----------- 148 (864)
Q Consensus 82 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~----------- 148 (864)
.-+|.+|++.+.++.+ +++ +.+-..+. ....++||||++|++|.++....
T Consensus 54 ~~~~~~E~~~l~~l~~-----------------HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~ 116 (309)
T d1fvra_ 54 HRDFAGELEVLCKLGH-----------------HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 116 (309)
T ss_dssp -CHHHHHHHHHTTCCC-----------------CTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHH
T ss_pred HHHHHHHHHHHHhccC-----------------CCCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhc
Confidence 1125667766665421 111 12222222 55678999999999999875321
Q ss_pred ----hcCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 149 ----AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 149 ----~~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
...++...+...+.++. +..+|..|++|||+||.|||++.+ +.++|+|||+++....
T Consensus 117 ~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~--~~~kl~DfG~a~~~~~ 179 (309)
T d1fvra_ 117 ANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN--YVAKIADFGLSRGQEV 179 (309)
T ss_dssp HTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGG--GCEEECCTTCEESSCE
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCC--CceEEccccccccccc
Confidence 12345555555444443 778999999999999999999875 8999999999876654
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=1.7e-14 Score=153.74 Aligned_cols=142 Identities=18% Similarity=0.216 Sum_probs=94.6
Q ss_pred cccccccceeeEEEEec-C-------CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhh
Q 002927 11 TPLATASIAQVHRATLV-D-------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 82 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~-------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 82 (864)
+.||+|+||+||+|+.. . +..||||+.+++..+.-.
T Consensus 19 ~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~------------------------------------ 62 (299)
T d1fgka_ 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL------------------------------------ 62 (299)
T ss_dssp EECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHH------------------------------------
T ss_pred eEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHH------------------------------------
Confidence 68999999999999964 2 247999998876543211
Q ss_pred ccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhh-----------
Q 002927 83 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA----------- 149 (864)
Q Consensus 83 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~----------- 149 (864)
.++.+|...+.++.+ +++ +.+-.++. ....++||||++|++|.++.....
T Consensus 63 ~~~~~e~~~l~~~~~-----------------HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~ 125 (299)
T d1fgka_ 63 SDLISEMEMMKMIGK-----------------HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 125 (299)
T ss_dssp HHHHHHHHHHHHHCC-----------------CTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC---------
T ss_pred HHHHHHHHHHHHhcC-----------------CCeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccc
Confidence 124456666666521 122 22222222 556889999999999998864322
Q ss_pred ----cCCCHHHHHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 150 ----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 150 ----~~~~~~~l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
..++...+...+.++. ++.+|+.|+||||+||.|||++.+ +.++|.|||+++.+..
T Consensus 126 ~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~--~~~kl~dfg~~~~~~~ 187 (299)
T d1fgka_ 126 HNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED--NVMKIADFGLARDIHH 187 (299)
T ss_dssp ---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT--CCEEECSTTCCCCGGG
T ss_pred cCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCC--CCeEeccchhhccccc
Confidence 1245555555555544 788999999999999999999865 8999999999987754
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=5e-15 Score=158.34 Aligned_cols=76 Identities=17% Similarity=0.222 Sum_probs=59.1
Q ss_pred CceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--HHHHHh--------cCeeccCCCCCCeEEccCCCCceEEE
Q 002927 128 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYV--------DGFFNGDPHPGNFLVSKDPPHRPILL 197 (864)
Q Consensus 128 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~--l~~i~~--------~G~~H~D~hPgNIlv~~~~~g~i~Li 197 (864)
..+|||||+++++|.++.. ....+.........+.. +..+|. .||+|||+||+||||+.+ +.++|+
T Consensus 75 ~~~lv~Ey~~~g~L~~~l~--~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~--~~~Kl~ 150 (303)
T d1vjya_ 75 QLWLVSDYHEHGSLFDYLN--RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN--GTCCIA 150 (303)
T ss_dssp EEEEEEECCTTCBHHHHHH--HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTT--SCEEEC
T ss_pred EEEEEEecccCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCC--CCeEEE
Confidence 3579999999999998854 44566655555555543 556664 599999999999999865 899999
Q ss_pred ecccccccCh
Q 002927 198 DFGLTKKLSS 207 (864)
Q Consensus 198 DFG~~~~l~~ 207 (864)
|||++..+..
T Consensus 151 DFGl~~~~~~ 160 (303)
T d1vjya_ 151 DLGLAVRHDS 160 (303)
T ss_dssp CCTTCEEEET
T ss_pred ecCccccccC
Confidence 9999887644
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=6.8e-15 Score=156.01 Aligned_cols=141 Identities=15% Similarity=0.130 Sum_probs=96.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|+||.||+|+.+ +|+.||||+.+...... .... .+.+|.
T Consensus 8 ~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~-----------------------------~~~~------~~~~E~ 52 (292)
T d1unla_ 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-----------------------------GVPS------SALREI 52 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSST-----------------------------THHH------HHHHHH
T ss_pred eEEecCcCeEEEEEEECCCCcEEEEEEEehhhCCh-----------------------------HHHH------HHHHHH
Confidence 56999999999999976 89999999975432110 0000 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHHH--
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 165 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~~-- 165 (864)
..+.++++ +. +.+-..+. ....+++||++.|..+..+.. .........+...+.+++
T Consensus 53 ~il~~l~h------------------~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~q~~~a 113 (292)
T d1unla_ 53 CLLKELKH------------------KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS-CNGDLDPEIVKSFLFQLLKG 113 (292)
T ss_dssp HHHTTCCC------------------TTBCCEEEEEECSSEEEEEEECCSEEHHHHHHH-TTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHhcCc------------------CCEEeeccccccccceeEEeeeccccccccccc-cccccchhHHHHHHHHHHHH
Confidence 44444322 22 22223332 556789999999988876643 233455555555555544
Q ss_pred HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 166 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 166 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
++.+|+.||+|||+||+|||++.+ +.++|+|||++.....
T Consensus 114 L~~lH~~~IvHrDiKP~NIli~~~--~~~kl~DFG~a~~~~~ 153 (292)
T d1unla_ 114 LGFCHSRNVLHRDLKPQNLLINRN--GELKLANFGLARAFGI 153 (292)
T ss_dssp HHHHHHTTEECCCCSGGGEEECTT--CCEEECCCTTCEECCS
T ss_pred HHHhhcCCEeeecccCcccccccC--CceeeeecchhhcccC
Confidence 889999999999999999999865 7999999999987764
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=1.2e-14 Score=155.34 Aligned_cols=145 Identities=19% Similarity=0.200 Sum_probs=95.2
Q ss_pred cccccccceeeEEEEec-C-CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHH
Q 002927 11 TPLATASIAQVHRATLV-D-GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 88 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~-G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 88 (864)
+.||+|+||.||+|+.. + ++.||||+.+...... .....+.+|
T Consensus 13 ~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~-----------------------------------~~~~~~~~E 57 (305)
T d1blxa_ 13 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-----------------------------------GMPLSTIRE 57 (305)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-----------------------------------SCBCTHHHH
T ss_pred EEEecccCeEEEEEEEECCCCEEEEEEEEehhhccc-----------------------------------hHHHHHHHH
Confidence 56999999999999974 4 6779999875432110 011123445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHH
Q 002927 89 AENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 161 (864)
Q Consensus 89 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~ 161 (864)
...++.+... .++.+ .+-.++. ....+++|||++|..+.........+.+...+...+
T Consensus 58 ~~~l~~l~~~---------------~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (305)
T d1blxa_ 58 VAVLRHLETF---------------EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM 122 (305)
T ss_dssp HHHHHHHHHT---------------CCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHH
T ss_pred HHHHHHHhhc---------------CCCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHH
Confidence 5555555431 11221 1222221 234689999999977654433334455655555544
Q ss_pred HHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 162 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 162 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
.+++ +..+|+.||+|||+||+|||++.+ +.++|+|||++.....
T Consensus 123 ~qi~~aL~yLH~~~ivHrDiKp~NILi~~~--~~~kl~dfg~~~~~~~ 168 (305)
T d1blxa_ 123 FQLLRGLDFLHSHRVVHRDLKPQNILVTSS--GQIKLADFGLARIYSF 168 (305)
T ss_dssp HHHHHHHHHHHHTTCCCCCCCGGGEEECTT--CCEEECSCCSCCCCCG
T ss_pred HHHHHHHHHHHhCCEEecCCCccEEEEcCC--CCeeecchhhhhhhcc
Confidence 4444 788999999999999999999865 8999999999886654
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=1.8e-14 Score=150.63 Aligned_cols=135 Identities=20% Similarity=0.238 Sum_probs=91.7
Q ss_pred cccccccceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHHH
Q 002927 11 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 90 (864)
Q Consensus 11 ~plasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 90 (864)
+.||+|++|.||+|++ .|++||||+.+..-.. + +|.+|++
T Consensus 13 ~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~~~~---------------------------------~------~~~~E~~ 52 (262)
T d1byga_ 13 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA---------------------------------Q------AFLAEAS 52 (262)
T ss_dssp EEEEECSSCEEEEEEE-TTEEEEEEECCCCC-----------------------------------H------HHHHTHH
T ss_pred EEEecCCCeEEEEEEE-CCeEEEEEEECcHHHH---------------------------------H------HHHHHHH
Confidence 6799999999999998 5889999997643210 0 1344665
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe-----cCCceEEEeecCCcCCCChHHHhh-cCCCHHHHHHHHHHH
Q 002927 91 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 164 (864)
Q Consensus 91 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~l~~~~~~~ 164 (864)
.+.++++ ++ |-+++. ....+|||||++|++|.++..... ..++...+...+.++
T Consensus 53 ~l~~l~H------------------pn--Iv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i 112 (262)
T d1byga_ 53 VMTQLRH------------------SN--LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 112 (262)
T ss_dssp HHTTCCC------------------TT--BCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHhCCC------------------CC--EeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence 5555432 22 223332 234689999999999999864332 235555555555554
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccCh
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 207 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 207 (864)
. +..+|..|++|+|+||.||+++.+ |.++|+|||+++..+.
T Consensus 113 ~~al~ylH~~~ivH~dlkp~Nil~~~~--~~~kl~dfg~s~~~~~ 155 (262)
T d1byga_ 113 CEAMEYLEGNNFVHRDLAARNVLVSED--NVAKVSDFGLTKEASS 155 (262)
T ss_dssp HHHHHHHHHTTCCCSCCSGGGEEECTT--SCEEECCCCC------
T ss_pred HhhccccccCceeccccchHhheecCC--CCEeecccccceecCC
Confidence 4 778999999999999999999965 8999999999886554
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=2.6e-14 Score=154.04 Aligned_cols=145 Identities=18% Similarity=0.207 Sum_probs=98.9
Q ss_pred cccccccceeeEEEEec----CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 11 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 11 ~plasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
+.||+|++|.||+|+.. +|+.||||+.+...... | . ...-.+.
T Consensus 30 ~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~---~----------------~--------------~~~~~~~ 76 (322)
T d1vzoa_ 30 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ---K----------------A--------------KTTEHTR 76 (322)
T ss_dssp EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEE---E----------------E--------------SSGGGCC
T ss_pred EEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhcc---c----------------h--------------HHHHHHH
Confidence 78999999999999852 58999999865321000 0 0 0001145
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-EEEeeEEe-cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 164 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~~~~~ 164 (864)
+|++.+.++++. +. +.+-..+. ....+++|||++|.+|.+..... .......+...+.++
T Consensus 77 ~E~~il~~l~h~-----------------pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~-~~~~e~~~~~~~~Qi 138 (322)
T d1vzoa_ 77 TERQVLEHIRQS-----------------PFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR-ERFTEHEVQIYVGEI 138 (322)
T ss_dssp CHHHHHHHHHTC-----------------TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHH-SCCCHHHHHHHHHHH
T ss_pred HHHHHHHhccCC-----------------CeEEEeeeeeccCCceeeeeecccccHHHHHHHhc-ccccHHHHHHHHHHH
Confidence 577788887652 11 11112222 56678999999999998875432 233444444444333
Q ss_pred H--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 165 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 165 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+ ++.+|..|++|||+||.|||++.+ |.++|+|||+++.+...
T Consensus 139 ~~al~~lH~~~ivHrDiKp~Nill~~~--~~vkL~DFG~a~~~~~~ 182 (322)
T d1vzoa_ 139 VLALEHLHKLGIIYRDIKLENILLDSN--GHVVLTDFGLSKEFVAD 182 (322)
T ss_dssp HHHHHHHHHTTCCCCCCCGGGEEECTT--SCEEESCSSEEEECCGG
T ss_pred HHHHHHhhcCCEEeccCCccceeecCC--CCEEEeeccchhhhccc
Confidence 3 788999999999999999999865 89999999999887654
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=2.9e-14 Score=153.18 Aligned_cols=143 Identities=15% Similarity=0.163 Sum_probs=91.8
Q ss_pred cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHHHHH
Q 002927 11 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 89 (864)
Q Consensus 11 ~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 89 (864)
+.||+|++|+||+|+.+ +|+.||||+.+..-.. . ....++.+|.
T Consensus 16 ~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~---------------------~--------------~~~~~~~~E~ 60 (318)
T d3blha1 16 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK---------------------E--------------GFPITALREI 60 (318)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEC----CT---------------------T--------------SSCHHHHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc---------------------h--------------HHHHHHHHHH
Confidence 67999999999999975 8999999986421100 0 0011244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe---------cCCceEEEeecCCcCCCChHHHhhcCCCHHHHHHH
Q 002927 90 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 160 (864)
Q Consensus 90 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 160 (864)
+.+.++++. ..+.+..++. ....++||||+++..+.... ..........+...
T Consensus 61 ~il~~l~h~-----------------nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~-~~~~~~~~~~~~~i 122 (318)
T d3blha1 61 KILQLLKHE-----------------NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRV 122 (318)
T ss_dssp HHHHHCCCT-----------------TBCCEEEEEEC----------CEEEEEECCCEEHHHHHT-CTTCCCCHHHHHHH
T ss_pred HHHHHhcCC-----------------CccceEeeeecccccccccCceEEEEEeccCCCccchhh-hcccccccHHHHHH
Confidence 666665331 1122222221 23457999999876654332 12233444444443
Q ss_pred HHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 161 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 161 ~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+.+++ ++.+|+.||+|||+||.|||++.+ +.++|.|||++..++..
T Consensus 123 ~~qil~~l~~lH~~~ivHrDlKp~NILl~~~--~~~kl~dfg~~~~~~~~ 170 (318)
T d3blha1 123 MQMLLNGLYYIHRNKILHRDMKAANVLITRD--GVLKLADFGLARAFSLA 170 (318)
T ss_dssp HHHHHHHHHHHHHTTEECCCCCGGGEEECTT--SCEEECCCTTCEECCC-
T ss_pred HHHHHHHHHHhccCCEEecCcCchheeecCC--CcEEeeecceeeecccc
Confidence 33333 888999999999999999999865 89999999999877653
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=1.1e-13 Score=151.08 Aligned_cols=143 Identities=18% Similarity=0.262 Sum_probs=90.3
Q ss_pred cccc-cccccccceeeEEEEec-CCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 7 DFVE-TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 7 ~fd~-~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
.|+. +.||+|+||.||+|+.+ +|+.||||+.+......-. . . .
T Consensus 18 ~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~--~---------------------------~------~ 62 (355)
T d2b1pa1 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH--A---------------------------K------R 62 (355)
T ss_dssp TEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHH--H---------------------------H------H
T ss_pred CeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHH--H---------------------------H------H
Confidence 4543 68999999999999976 7999999997644321100 0 0 1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCE-EEeeEEe-------cCCceEEEeecCCcCCCChHHHhhcCCCHHH
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQK 156 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ 156 (864)
+.+|...++++.+ +.+ .+-.++. .+..++||||+.|..+... ...++...
T Consensus 63 ~~~Ei~il~~l~h------------------pnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~----~~~~~~~~ 120 (355)
T d2b1pa1 63 AYRELVLMKCVNH------------------KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----QMELDHER 120 (355)
T ss_dssp HHHHHHHHHHCCC------------------TTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHH----TSCCCHHH
T ss_pred HHHHHHHHHhcCC------------------CCeeEEEEEEecccccccCceeEEEEeccchHHHHhh----hcCCCHHH
Confidence 3345555555422 111 1112221 2345899999998655433 23456666
Q ss_pred HHHHHHHHH--HHHHHhcCeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 157 VVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 157 l~~~~~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
+...+.+++ +..+|..||+|||+||.|||++.+ +.++++|||+++..+..
T Consensus 121 i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~--~~~kl~df~~~~~~~~~ 172 (355)
T d2b1pa1 121 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTAGTS 172 (355)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT--CCEEECCCCC-------
T ss_pred HHHHHHHHHHHHHHhhhcccccccCCccccccccc--cceeeechhhhhccccc
Confidence 655555554 888999999999999999999965 88999999998876543
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.19 E-value=2e-11 Score=132.80 Aligned_cols=149 Identities=12% Similarity=0.031 Sum_probs=84.5
Q ss_pred ccccccccceeeEEEEec-CCCEEEEEEecCChH--HHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhccHH
Q 002927 10 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIK--TIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 86 (864)
Q Consensus 10 ~~plasaSigqV~~A~l~-~G~~VAVKv~~p~i~--~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 86 (864)
-+.||+|++|+||+|+.+ +|+.||||+.+..-. +.... |+++.
T Consensus 18 ~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~----------------------------------Ei~~l 63 (362)
T d1q8ya_ 18 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAED----------------------------------EIKLL 63 (362)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHH----------------------------------HHHHH
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHH----------------------------------HHHHH
Confidence 378999999999999975 899999999875421 12222 22222
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEE---e---cCCceEEEeecCCcCCCChHHH--hhcCCCHHHHH
Q 002927 87 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q---SSETVLILEFMDGIRLNDCESL--EAFGVNKQKVV 158 (864)
Q Consensus 87 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~---~~~~vLvmE~i~G~~L~~~~~~--~~~~~~~~~l~ 158 (864)
++..+......... .++ .|.+++ . ....+++|+++.+......... .........+.
T Consensus 64 ~~l~~~~~~~~~~~-------------~~~--~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 128 (362)
T d1q8ya_ 64 QRVNDADNTKEDSM-------------GAN--HILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVK 128 (362)
T ss_dssp HHHHHTCCSHHHHH-------------HHT--TBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHH
T ss_pred HHhcchhhhhhhhc-------------CcC--ceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHH
Confidence 22221110000000 000 122221 1 3445677777655443222111 12233444443
Q ss_pred HHHHHHH--HHHHHh-cCeeccCCCCCCeEEccCCC----CceEEEecccccccCh
Q 002927 159 EEITRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPP----HRPILLDFGLTKKLSS 207 (864)
Q Consensus 159 ~~~~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~----g~i~LiDFG~~~~l~~ 207 (864)
..+.+++ +..+|. .||+|||+||+|||++.++. ..++++|||.+.....
T Consensus 129 ~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~ 184 (362)
T d1q8ya_ 129 QISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE 184 (362)
T ss_dssp HHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB
T ss_pred HHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeeccccccccc
Confidence 3333333 667786 99999999999999986422 2489999999876643
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.67 E-value=1.7e-08 Score=103.17 Aligned_cols=80 Identities=18% Similarity=0.184 Sum_probs=56.6
Q ss_pred cccccccccccc-ceeeEEEEecCCCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhHhhcc
Q 002927 6 MDFVETPLATAS-IAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 84 (864)
Q Consensus 6 ~~fd~~plasaS-igqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 84 (864)
...+-+|++.|. -++||+.+..+|..++||+.+++-.. +
T Consensus 11 ~g~~~~~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~~~----------------------------------------~ 50 (255)
T d1nd4a_ 11 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALN----------------------------------------E 50 (255)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTTS----------------------------------------C
T ss_pred cCCceEEcCCcccCCeEEEEEeCCCCEEEEEeCCccCHh----------------------------------------H
Confidence 334446777765 57999999878888999998876432 2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEe----cCCceEEEeecCCcCCCC
Q 002927 85 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLND 143 (864)
Q Consensus 85 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLvmE~i~G~~L~~ 143 (864)
+..|++.++.++. ..+.||+++. ....+++|||++|.++.+
T Consensus 51 l~~E~~~l~~L~~------------------~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~~ 95 (255)
T d1nd4a_ 51 LQDEAARLSWLAT------------------TGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS 95 (255)
T ss_dssp HHHHHHHHHHHHT------------------TTCCBCCEEEEEECSSCEEEEEECCSSEETTT
T ss_pred HHHHHHHHHHHHh------------------cCCCCCceeeecccccceEEEEEeeecccccc
Confidence 3445655555543 1466898885 356789999999998865
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=98.44 E-value=1e-07 Score=101.58 Aligned_cols=31 Identities=26% Similarity=0.381 Sum_probs=25.2
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEeccccccc
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 205 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 205 (864)
..+++|+|+||+|||++. + ..+|||+-++.=
T Consensus 191 p~~liHgDlh~~NvL~~~---~-~~~IDFdd~~~g 221 (325)
T d1zyla1 191 TVLRLHGDCHAGNILWRD---G-PMFVDLDDARNG 221 (325)
T ss_dssp CCEECCSSCSGGGEEESS---S-EEECCCTTCCEE
T ss_pred CceeecCCCCcccEEEeC---C-ceEEechhcccC
Confidence 368999999999999963 3 568999987753
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.30 E-value=1.1e-06 Score=89.82 Aligned_cols=34 Identities=21% Similarity=0.295 Sum_probs=27.1
Q ss_pred CeeccCCCCCCeEEccCCCCceEEEecccccccChH
Q 002927 173 GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 208 (864)
Q Consensus 173 G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 208 (864)
.++|+|+||+|||++++ +.+.||||+.++.-++.
T Consensus 184 ~l~HgD~~~~Nil~~~~--~~~~lIDwe~a~~g~~~ 217 (263)
T d1j7la_ 184 VFSHGDLGDSNIFVKDG--KVSGFIDLGRSGRADKW 217 (263)
T ss_dssp EEECSCCCTTSEEEETT--EEEEECCCTTCEEEEHH
T ss_pred EEEEeeccCcceeecCC--ceEEEeechhcccCCHH
Confidence 58999999999999843 34569999998875543
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=98.18 E-value=1.8e-06 Score=94.09 Aligned_cols=49 Identities=22% Similarity=0.348 Sum_probs=34.5
Q ss_pred CeeccCCCCCCeEEccCCCCceEEEecccccccChH--HHHHHHHHHHHHHhCC
Q 002927 173 GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS--MKQALAKMFFAAAEGD 224 (864)
Q Consensus 173 G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~--~r~~~~~l~~a~~~~d 224 (864)
.++|+|+||||||++++ +++||||-++..=++. .-.-++.++.+.+..+
T Consensus 224 ~LiHGDl~~gNIlv~~~---~~~vID~E~a~~G~~~~Dlg~~~~~~~~~~~~~~ 274 (392)
T d2pula1 224 TLIHGDLHTGSIFASEH---ETKVIDPEFAFYGPIGFDVGQFIANLFLNALSRD 274 (392)
T ss_dssp EEECSCCCGGGEEECSS---CEEECCCTTCEEECTHHHHHHHHHHHHHHHHHSC
T ss_pred ceeccCCcCCceeEcCC---ceEEechhhcccCCHHHHHHHHHHHHHHHHhhcc
Confidence 69999999999999853 6999999876654443 2333555555555443
|
| >d1tvfa2 e.3.1.1 (A:15-315) Pencillin binding protein 4 (PbpD), N-terminal domain {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Pencillin binding protein 4 (PbpD), N-terminal domain species: Staphylococcus aureus [TaxId: 1280]
Probab=98.05 E-value=2.5e-05 Score=81.22 Aligned_cols=52 Identities=21% Similarity=0.270 Sum_probs=44.2
Q ss_pred eeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 384 GIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 384 G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
..+|.+...|+++|++ +.+..+++||+||++|++.++..+++|+++||++|.
T Consensus 36 ~a~iv~~~TG~VLy~k-------------Na~~~~~pAS~tKlMTa~v~le~i~~g~~~l~~~v~ 87 (301)
T d1tvfa2 36 TSAVNVSQTGQLLYQY-------------NIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVT 87 (301)
T ss_dssp SEEEEEETTSBEEEEE-------------STTCCBCCGGGHHHHHHHHHHHHHHTTSSCTTCEEE
T ss_pred ceEEEEcCCCcEehee-------------CcCCCcCchHHHHHHHHHHHHHHHhcCCCCcccCeE
Confidence 3445556889999875 557889999999999999999999999999999764
|
| >d1es5a_ e.3.1.1 (A:) D-ala carboxypeptidase/transpeptidase {Streptomyces sp., K15 [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-ala carboxypeptidase/transpeptidase species: Streptomyces sp., K15 [TaxId: 1931]
Probab=97.74 E-value=0.00012 Score=74.45 Aligned_cols=42 Identities=21% Similarity=0.289 Sum_probs=34.8
Q ss_pred ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 391 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 391 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
..|++++++ +.+..+++||+||++|+..+ .++|+++||++|.
T Consensus 15 ~tG~vL~~k-------------na~~~~~~AS~tKlmTa~v~---l~~~~~~ld~~vt 56 (260)
T d1es5a_ 15 GTGTTLYTK-------------AADTRRSTGSTTKIMTAKVV---LAQSNLNLDAKVT 56 (260)
T ss_dssp TTCCEEEEE-------------STTCCBCCGGGGHHHHHHHH---HTCTTCCTTCEEE
T ss_pred CCCcEeeeE-------------CcCCCcCCHHHHHHHHHHHH---HHcCCCCCCceEE
Confidence 458888874 55788999999999998886 4889999999775
|
| >d1iysa_ e.3.1.1 (A:) beta-Lactamase, class A {Escherichia coli, TOHO-1 [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Escherichia coli, TOHO-1 [TaxId: 562]
Probab=97.72 E-value=0.00085 Score=67.64 Aligned_cols=37 Identities=19% Similarity=0.231 Sum_probs=33.8
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchhh
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIAN 449 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~~ 449 (864)
+.|..|+.||++|+++++++++.+++|+++++++|.-
T Consensus 34 n~d~~~~~AS~~Kl~~~~~~l~~v~~g~l~~~~~v~~ 70 (261)
T d1iysa_ 34 RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEI 70 (261)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHTSCTTSTTCEEEC
T ss_pred CCCCcCccHHHHHHHHHHHHHHhhhcCCCCcCceEEE
Confidence 4578899999999999999999999999999998764
|
| >d3beca2 e.3.1.1 (A:4-262) Penicillin-binding protein 5, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Penicillin-binding protein 5, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.60 E-value=0.00013 Score=74.16 Aligned_cols=45 Identities=22% Similarity=0.271 Sum_probs=38.8
Q ss_pred ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 391 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 391 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
..|++++++ +.+...++||+||++|++.++..++.|++++++.+.
T Consensus 23 ~tg~vL~~k-------------n~~~~~~~ASlTKlMTa~v~l~~~~~~~l~~~~~v~ 67 (259)
T d3beca2 23 NSGKVLAEQ-------------NADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVT 67 (259)
T ss_dssp TTCCEEEEE-------------STTCCBCCGGGHHHHHHHHHHHHHHTTSCCTTCEEE
T ss_pred CCCcEeeeE-------------CcCCCcCChHHHHHHHHHHHHHHHHhCCCCccccee
Confidence 457888864 557789999999999999999999999999998764
|
| >d1xp4a2 e.3.1.1 (A:25-293) D,D-carboxypeptidase DacA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D,D-carboxypeptidase DacA, N-terminal domain species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.52 E-value=0.0006 Score=69.39 Aligned_cols=46 Identities=20% Similarity=0.315 Sum_probs=39.8
Q ss_pred ecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchhh
Q 002927 391 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIAN 449 (864)
Q Consensus 391 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~~ 449 (864)
..|++++++ +.+...++||+||++|++.++..+++|+|+++++|..
T Consensus 14 ~tG~vL~~k-------------n~~~~~~pAS~TKlmTa~v~le~l~~g~l~~~~~v~~ 59 (269)
T d1xp4a2 14 NTGKILYEK-------------DATQPVEIASITKLITVYLVYEALENGSITLSTPVDI 59 (269)
T ss_dssp TTTEEEEEE-------------SCSSCEECGGGGHHHHHHHHHHHHHHTSSCTTCEEEC
T ss_pred CCCCEeeee-------------CcCCCcCCHHHHHHHHHHHHHHHHHcCCCCccccccc
Confidence 458898875 4578899999999999999999999999999998753
|
| >d1e25a_ e.3.1.1 (A:) beta-Lactamase, class A {Pseudomonas aeruginosa, PER-1 [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Pseudomonas aeruginosa, PER-1 [TaxId: 287]
Probab=97.37 E-value=0.00027 Score=72.17 Aligned_cols=37 Identities=35% Similarity=0.395 Sum_probs=34.4
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchhh
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIAN 449 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~~ 449 (864)
+++..|+.||++|++|+++++..+++|+++||++|.-
T Consensus 35 n~~~~~p~AS~~Kl~~~~~~l~~i~~g~l~l~~~v~~ 71 (278)
T d1e25a_ 35 NPFEKFPMQSVFKLHLAMLVLHQVDQGKLDLNQTVIV 71 (278)
T ss_dssp STTCCEECGGGHHHHHHHHHHHHHHTTSSCTTCEEEE
T ss_pred CCCCeeccHHHHHHHHHHHHHHHHHcCCCCchhhccc
Confidence 6688899999999999999999999999999999853
|
| >d1m40a_ e.3.1.1 (A:) beta-Lactamase, class A {Escherichia coli, TEM-1 [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Escherichia coli, TEM-1 [TaxId: 562]
Probab=97.33 E-value=0.0014 Score=66.18 Aligned_cols=69 Identities=25% Similarity=0.379 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHhcccCccceeEEEEeecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCc
Q 002927 364 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKL 443 (864)
Q Consensus 364 ~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~l 443 (864)
+..++++++..+.-. ..|+.+.=...|++++. + +.|..|+.||++|++++++++..++.|++++
T Consensus 3 ~~~~~i~~~~~~~~~---~vgv~v~dl~tG~~l~s--~-----------n~d~~~p~AS~~Kl~~~~~~l~~v~~g~~~~ 66 (263)
T d1m40a_ 3 ETLVKVKDAEDQLGA---RVGYIELDLNSGKILES--F-----------RPEERFPMMSTFKVLLCGAVLSRVDAGQEQL 66 (263)
T ss_dssp HHHHHHHHHHHHHTS---EEEEEEEETTTCCEEEE--E-----------STTSCEECGGGHHHHHHHHHHHHHHTTSCCT
T ss_pred cHHHHHHHHHHhcCC---eEEEEEEECCCCcEeeE--E-----------CCCCcccchHHHHHHHHHHHHHhhhcCCcCC
Confidence 344556665554331 22332222256787763 2 5677899999999999999999999999999
Q ss_pred cCchh
Q 002927 444 EENIA 448 (864)
Q Consensus 444 d~~v~ 448 (864)
+++|.
T Consensus 67 ~~~v~ 71 (263)
T d1m40a_ 67 GRRIH 71 (263)
T ss_dssp TCEEC
T ss_pred CceEE
Confidence 99883
|
| >d1bsga_ e.3.1.1 (A:) beta-Lactamase, class A {Streptomyces albus G [TaxId: 1962]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Streptomyces albus G [TaxId: 1962]
Probab=97.32 E-value=0.0035 Score=63.09 Aligned_cols=36 Identities=28% Similarity=0.361 Sum_probs=33.4
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
++|..|+.||++|+++++++++.+++|+++|++++.
T Consensus 34 n~d~~~~~AS~~Kl~~~~~~l~~~~~g~~~~~~~~~ 69 (266)
T d1bsga_ 34 RADELFPMCSVFKTLSSAAVLRDLDRNGEFLSRRIL 69 (266)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHTCSSSTTTTCEEC
T ss_pred CCCCccccHHHHHHHHHHHHHHHhhcCCCccceeeE
Confidence 568899999999999999999999999999999873
|
| >d1n9ba_ e.3.1.1 (A:) beta-Lactamase, class A {Klebsiella pneumoniae, SHV-2 [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Klebsiella pneumoniae, SHV-2 [TaxId: 573]
Probab=97.20 E-value=0.0012 Score=66.74 Aligned_cols=46 Identities=28% Similarity=0.403 Sum_probs=40.1
Q ss_pred eecCeEEEEeeeeccCCCCCCCCCCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 390 YKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 390 ~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
...|++++. + +.|+.|+.||++|++++++++..+++|+++++++|.
T Consensus 26 ~~tG~~l~~--~-----------n~d~~~~~AS~~Kl~~a~~~l~~v~~g~~~~~~~v~ 71 (265)
T d1n9ba_ 26 LASGRTLTA--W-----------RADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIH 71 (265)
T ss_dssp TTTCCEEEE--E-----------STTSCEECGGGHHHHHHHHHHHHHHTTSCCTTCEEC
T ss_pred CCCCcEeee--E-----------CCCCccccHHHHHHHHHHHHHHHHhcCCCCCceEEE
Confidence 367777763 2 568899999999999999999999999999999886
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.16 E-value=0.00041 Score=72.21 Aligned_cols=32 Identities=22% Similarity=0.274 Sum_probs=27.4
Q ss_pred hcCeeccCCCCCCeEEccCCCCceEEEecccccc
Q 002927 171 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 204 (864)
Q Consensus 171 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 204 (864)
..|++|+|+||+||+++.+ +...+|||+.++.
T Consensus 182 ~~giIHgDl~~dNvl~~~~--~v~gvIDF~~~~~ 213 (316)
T d2ppqa1 182 PAGVIHADLFQDNVFFLGD--ELSGLIDFYFACN 213 (316)
T ss_dssp CEEEECSCCCGGGEEEETT--EEEEECCCTTCEE
T ss_pred ccccccCCcchhhhhcccc--cceeEeccccccc
Confidence 5799999999999999854 4458999999875
|
| >d1g6aa_ e.3.1.1 (A:) beta-Lactamase, class A {Pseudomonas aeruginosa, PSE-4 carbenicillinase [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Pseudomonas aeruginosa, PSE-4 carbenicillinase [TaxId: 287]
Probab=97.13 E-value=0.0035 Score=63.20 Aligned_cols=36 Identities=22% Similarity=0.374 Sum_probs=33.4
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
+.+..|+.||+.|+++++++++.+++|++++++++.
T Consensus 37 n~~~~~p~AS~~Kl~~a~~~l~~~~~g~l~~~~~i~ 72 (266)
T d1g6aa_ 37 NGNQRFPLTSTFKTIACAKLLYDAEQGKVNPNSTVE 72 (266)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHHTTSCCTTCEEE
T ss_pred CCCCeecchHHHHHHHHHHHHHHHHcCCCCccceEE
Confidence 557889999999999999999999999999999885
|
| >d2cc1a1 e.3.1.1 (A:27-293) beta-Lactamase, class A {Mycobacterium fortuitum [TaxId: 1766]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Mycobacterium fortuitum [TaxId: 1766]
Probab=97.11 E-value=0.0021 Score=64.73 Aligned_cols=36 Identities=25% Similarity=0.543 Sum_probs=33.6
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
++|..|+.||++|+++++++++.+++|++++|++|.
T Consensus 34 n~d~~~~~AS~~Kl~~a~~~l~~~~~g~~~~~~~v~ 69 (262)
T d2cc1a1 34 RPDEMFAMCSTFKGYVAARVLQMAEHGEISLDNRVF 69 (262)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHHTTSSCTTCEEE
T ss_pred CCCCcCccHHHHHHHHHHHHHHHhhccCcccCceEE
Confidence 568899999999999999999999999999999875
|
| >d1o7ea_ e.3.1.1 (A:) beta-Lactamase, class A {Stenotrophomonas maltophilia, L2 [TaxId: 40324]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Stenotrophomonas maltophilia, L2 [TaxId: 40324]
Probab=97.05 E-value=0.002 Score=65.27 Aligned_cols=36 Identities=19% Similarity=0.261 Sum_probs=33.5
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
+.|..|+++|++|++++++++..+++|+++||++|.
T Consensus 38 ~~d~~~p~AS~~Kl~~~~~~l~~~~~g~~~ld~~v~ 73 (267)
T d1o7ea_ 38 RQDERFPMCSTFKSMLAATVLSQAERMPALLDRRVP 73 (267)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHTTCTTTTTCEEE
T ss_pred CCCCccccHHHHHHHHHHHHHHHhhcCCCCCCcEEE
Confidence 457889999999999999999999999999999875
|
| >d1i2sa_ e.3.1.1 (A:) beta-Lactamase, class A {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Bacillus licheniformis [TaxId: 1402]
Probab=96.93 E-value=0.0063 Score=60.78 Aligned_cols=29 Identities=31% Similarity=0.384 Sum_probs=25.1
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCC
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKL 441 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l 441 (864)
+.+..|+.||++|+++++++++.+++|+|
T Consensus 30 n~d~~~~~AS~~Kl~~~~~~l~~~~~g~L 58 (255)
T d1i2sa_ 30 RPDERFAFASTIKALTVGVLLQQKSIEDL 58 (255)
T ss_dssp STTCCEECGGGHHHHHHHHHHHHSCTGGG
T ss_pred CCCCcCccHHHHHHHHHHHHHHHcccCCC
Confidence 45788999999999999999988777754
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.83 E-value=0.0012 Score=70.89 Aligned_cols=79 Identities=13% Similarity=0.114 Sum_probs=54.0
Q ss_pred cccccccccccceeeEEEEecC--------CCEEEEEEecCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHH
Q 002927 7 DFVETPLATASIAQVHRATLVD--------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 78 (864)
Q Consensus 7 ~fd~~plasaSigqV~~A~l~~--------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 78 (864)
+++-++|+.|-.-++|+....+ ++.|+++|-- +...
T Consensus 44 ~l~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~~~----------------------------------- 87 (395)
T d1nw1a_ 44 HLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NPET----------------------------------- 87 (395)
T ss_dssp GEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SCCC-----------------------------------
T ss_pred ceEEEEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-Ccch-----------------------------------
Confidence 4555789999999999998753 3678888743 2111
Q ss_pred hHhhccHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCEEEeeEEecCCceEEEeecCCcCCCC
Q 002927 79 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLND 143 (864)
Q Consensus 79 ~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLvmE~i~G~~L~~ 143 (864)
.+|..+|.++++.+... .+ .|+++......++|||++|.++..
T Consensus 88 ---~idr~~E~~i~~~ls~~------------------gl-~Pkll~~~~~g~I~efi~g~~l~~ 130 (395)
T d1nw1a_ 88 ---ESHLVAESVIFTLLSER------------------HL-GPKLYGIFSGGRLEEYIPSRPLSC 130 (395)
T ss_dssp ---HHHHHHHHHHHHHHHHT------------------TS-SSCEEEEETTEEEECCCCEEECCT
T ss_pred ---hhHHHHHHHHHHHHHhC------------------CC-CCeEEEEcCCceEEEEeccccCCh
Confidence 11223466676666541 23 688888556789999999988774
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| >d1djaa_ e.3.1.1 (A:) beta-Lactamase, class A {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
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class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Staphylococcus aureus [TaxId: 1280]
Probab=96.81 E-value=0.0095 Score=59.52 Aligned_cols=30 Identities=27% Similarity=0.300 Sum_probs=26.4
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCC
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLK 442 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ 442 (864)
+.|..|+.||++|+++++++++.+++|+|+
T Consensus 31 n~d~~~~~AS~~Kl~~a~~~l~~~~~~~Ld 60 (258)
T d1djaa_ 31 NSDKRFAYASTSHAINSAILLEQVPYNKLN 60 (258)
T ss_dssp STTSCEECGGGHHHHHHHHHHTSSCGGGTT
T ss_pred CCCCcCccHHHHHHHHHHHHHHhccccCcC
Confidence 457889999999999999999988888763
|
| >d1buea_ e.3.1.1 (A:) beta-Lactamase, class A {Enterobacter cloacae, NMC-A carbapenemase [TaxId: 550]} | Back information, alignment and structure |
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class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Enterobacter cloacae, NMC-A carbapenemase [TaxId: 550]
Probab=94.34 E-value=0.043 Score=54.63 Aligned_cols=36 Identities=22% Similarity=0.343 Sum_probs=33.3
Q ss_pred CCCCccccccccHHHHHHHHHHHHHCCCCCccCchh
Q 002927 413 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 448 (864)
Q Consensus 413 ~~~t~f~i~SiTK~~ta~~i~~lve~G~l~ld~~v~ 448 (864)
+.+..|+.||++|+++++++++.+++|+++|+++|.
T Consensus 35 n~~~~~p~AS~~Kl~~a~~~l~~i~~g~~~~~~~v~ 70 (265)
T d1buea_ 35 RANERFPLCSSFKGFLAAAVLKGSQDNRLNLNQIVN 70 (265)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHHTTSSCTTCEEC
T ss_pred CCCCccccHHHHHHHHHHHHHHHhhcCCCCcccceE
Confidence 457889999999999999999999999999999874
|
| >d1pyya4 e.3.1.1 (A:264-631) Penicillin-binding protein 2x (pbp-2x), transpeptidase domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
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class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Penicillin-binding protein 2x (pbp-2x), transpeptidase domain species: Streptococcus pneumoniae [TaxId: 1313]
Probab=92.56 E-value=0.59 Score=48.53 Aligned_cols=82 Identities=13% Similarity=0.043 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHhcccCccceeEEEEe--ecCeEEEEeeeeccCCC------CCCCCC---CCCccccccccHHHHHHHH
Q 002927 364 DVEAKLRDFLVELGNDGKILGIQVCAY--KDGEVIIDTSAGMLGRY------DPRPVQ---PDSLFPVFSVTKGITAGML 432 (864)
Q Consensus 364 ~l~~~l~~~l~~~~~~~~~~G~~v~v~--~~g~~v~~~~~G~~~~~------~~~~~~---~~t~f~i~SiTK~~ta~~i 432 (864)
.++..+++.+++..++..-..+++.|+ +.|+++.-.++=.-|.. ...+.. ....|.-||+-|+||+++.
T Consensus 5 ~lQ~~~e~~l~~~~~~~~~~~~~~vv~d~~TG~IlAmas~P~~dpn~~~~~~~~~~~~n~a~~~~~~PGStfKp~~~aaa 84 (368)
T d1pyya4 5 PLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATTQRPTFDADTKEGITEDFVWRDILYQSNYEPGSAFKVMMLAAA 84 (368)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEEEEETTTTEEEEEEEESCCCTTTCTTCCTTCCCCCHHHHCCBCCGGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCceEEEEEEECCCCcEEEEEeCCCCCcccccCccchhhhhhhhhhCccCCcchhhhHHHHHh
Confidence 445555555554443333333344444 67888765432111111 111111 1256788999999987664
Q ss_pred HHHHHCCCCCccCchh
Q 002927 433 HWLVDNGKLKLEENIA 448 (864)
Q Consensus 433 ~~lve~G~l~ld~~v~ 448 (864)
.|+|.++.++.+.
T Consensus 85 ---Le~g~~~~~~~~~ 97 (368)
T d1pyya4 85 ---IDNNTFPGGEVFN 97 (368)
T ss_dssp ---HHTTCCCTTCEEE
T ss_pred ---hhccccccccccc
Confidence 5889988776554
|