Citrus Sinensis ID: 002938

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860----
MQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDRAKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNMDGRVNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSETGHNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYTEAEEVVATALACLVDSPSDNGCGRSTTRFQQCPLLNISYCPASEIDFSNGKNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRNPMVPPKYWLAFPVSVPPLGFSTYTISSVKRGGGHSIRSSIQTFESSDKSTVEVGQGNLKLIFSSDKSKPINYINNKSLVEESVEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWRNSHVTTFSGIDSSYSLPDNVAIITLQELDDGKILLRLAHLYQLGEDNDLSKPTNVELKKLFPRKKIGKVTETSLSANQERTEMEKRDSSGK
cHHHHHHHHHcccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHcccccEEEEcccccccHHHHHHHHHcccccEEEEEcccHHHHHHHcccccEEEEEccccccccccEEEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccEEEEccccccccHHHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHcccccccccccccccccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEEEEEcccccEEEEEEEEEEEccccEEEcccccEEEEEEccccccccccEEEEEEEEccccccccccEEEEEEcccccccEEEEEEEEccccccccccccEEEEEcccccccccccccEEEEEEccccccEEEEEccccEEEEEEEEEEEEEccccccccccccccccccccccccEEcccccEEEEEEEcccEEEEEEEEccEEEEEEEEccccccEEEEEEEccEEcccccccEEEEEEEEccccccEEEEEcccccccccccccccccccccccccccccccccEEEEEEEccEEEEEEEccccccccccccEEEEEEcccccccccccHHHccccccccccccccEEEEcEEEEEEccccccccccccccHHHcccccEEEEcccccccccccccccccccccccccccEEEEEEEEcccccEEEEEEEHHcccccccccccEEEEcccccccccccEEEEEcccccccccHHHccccccc
cHHHHHHHHHcccEEEcccccccEccccccHHHHHHHHHHHHHHHHHHHcccccEEEEcccccEccHHHHHHHHHcccccEEEEEEcHHHHHHHHHccccEEEEEcccccccccHHHHccccccccccccccEccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHccHccccccccccEEccccccEEEEEEccccccccEEEEEEccccEEEEEcccccEEEEEEEEccHHHHHcHHccEEEcccccccccccEEEEEEEEccccccEEEEEEEcccccccccccccccccccccccEEEEccEEEEEEccccccEEEEEEccccEEEEEEEEEEEEEEcccccccccccccEEEEccccccccccccccEEEEEEccHHHHHHHHccHHHHHEEEEcccccEEEEEEEEccEEcccccccEEEEEEEEEcccccEEEEccccHHHHHHHHcccccccccccccHHHHcEEEccEEEEEcccEEEEEEEcccEEEEcccccEEEEEEEEEEcccccccccccEcccccEEccccEEEEEcEEEEEEccccccHHHHHHHHHHHccccHHHHccccccccccccccccccccccccccccEEEEEEcccccccEEEEEHHHccccccccccccEEEEHHHHcccccEEEEEEEEccccccHHHHccccEccc
MQHEVKQlvgsgqlefinggmcmhdEAVTHYIDMidqttlghrfiknefgvtprigwqidpfghSAVQAYLLGsevgfdsffygridyqdrakrkneKSLEVVWQGSrslgssaqifagafpenyepppggfyfevndkypiiqdniklfdynVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNMDgrvnalystpsiytdakyasneswplktddffpyadrahaywtgyfssrpaLKRYVKVMSGYYLAARQLEFYigrsetghntDSLADALAIAQhhdavtgtekQHVANDYAKRLAIGYTEAEEVVATALACLvdspsdngcgrsttrfqqcpllnisycpaseidfsngkNLVIVIYNslgwkrediiripvangdvtvfnsegkiiesqlvppadafmdLRDYYVRAYlgrnpmvppkywlafpvsvpplgfstytissvkrggghsirssiqtfessdkstveVGQGNLKLifssdkskpinyinNKSLVEESVEQSysfypayngtndkapqnagayifrpngtffiksegqvpltvmrgpiLDEVHQKINEWIYQVTRLYKGKEHVEVEfivgpipvddglgKEVVTHITSTletnktfytdsngrDFIKRIRDYrtdwdlevnepvagnyypinlgIYMQDVKKEFSLLVDralggssivdGEVELMLHRRLLLDDSRGVAEALnetdcvldeckgltiqgkyyfridtigdgakwrrtfgqeiysppllafteedgdswrnshvttfsgidssyslpdnvaIITLQELDDGKILLRLAHLYQlgedndlskptnvelkklfprkkigkvtetSLSANqertemekrdssgk
mqhevkqlVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDrakrkneksLEVVWQGSRSLGSSAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAISQanitrtnhimWTMGTDFKYQYARTWFRQLDKFIHYVNMDGRVNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSETGHNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYTEAEEVVATALACLVDSPSDNGCGRSTTRFQQCPLLNISYCPAseidfsngkNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGkiiesqlvppadafMDLRDYYVRAYLGRNPMVPPKYWLAFPVSVPPLGFSTYTISSVKRGGGHSIRSSIqtfessdkstvEVGQGNLKLifssdkskpinYINNKSLVEESVEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVgpipvddglGKEVVTHItstletnktfytdsngrdfiKRIRDYrtdwdlevnepVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALnetdcvldeckgltiqgkyyfRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWRNSHVTTfsgidssyslPDNVAIITLQELDDGKILLRLAHLYQlgedndlskptnvelkklfprkkigkvtetslsanqertemekrdssgk
MQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDRAKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNMDGRVNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSETGHNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYteaeevvataLACLVDSPSDNGCGRSTTRFQQCPLLNISYCPASEIDFSNGKNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRNPMVPPKYWLAFPVSVPPLGFSTYTISSVKRGGGHSIRSSIQTFESSDKSTVEVGQGNLKLIFSSDKSKPINYINNKSLVEESVEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWRNSHVTTFSGIDSSYSLPDNVAIITLQELDDGKILLRLAHLYQLGEDNDLSKPTNVELKKLFPRKKIGKVTETSLSANQERTEMEKRDSSGK
********VGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDR********LEVVWQGSRSLGSSAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNMDGRVNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSETGHNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYTEAEEVVATALACLVDSPSDNGCGRSTTRFQQCPLLNISYCPASEIDFSNGKNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRNPMVPPKYWLAFPVSVPPLGFSTYTISSVK***************************NLKLIF*******INYINNKSLVEESVEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWRNSHVTTFSGIDSSYSLPDNVAIITLQELDDGKILLRLAHLYQLGE**********************************************
*QHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDRAKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNMDGRVNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSETGHNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYTEAEEVVATALACLVDSPSDNGCGRSTTRFQQCPLLNISYCP*********KNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRNPMVPPKYWLAFPVSVPPLGFSTYTIS********************DKSTVEVGQGNLKLIFSSDKSKPINYINNKSLVEESVEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYY******************EIYSPPLLAFT*****************IDSSYSLPDNVAIITLQELDDGKILLRLAHLYQLGEDNDLSKPTNVELKKLFPRKKIGKVTETSLSANQERTEMEK******
MQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDR**********VVWQGSRSLGSSAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNMDGRVNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSETGHNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYTEAEEVVATALACLVDSPSDNGCGRSTTRFQQCPLLNISYCPASEIDFSNGKNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRNPMVPPKYWLAFPVSVPPLGFSTYTISSVKRGGGHSIRSSIQ***********VGQGNLKLIFSSDKSKPINYINNKSLVEESVEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWRNSHVTTFSGIDSSYSLPDNVAIITLQELDDGKILLRLAHLYQLGEDNDLSKPTNVELKKLFPRKKIGKVTETSLSA***************
MQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDRAKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNMDGRVNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSETGHNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYTEAEEVVATALACLVDSPSDNGCGRSTTRFQQCPLLNISYCPASEIDFSNGKNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRNPMVPPKYWLAFPVSVPPLGFSTYTISSVK******************KSTVEVGQGNLKLIFSSDKSKPINYINNKSLVEESVEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWRNSHVTTFSGIDSSYSLPDNVAIITLQELDDGKILLRLAHLYQLGEDNDLSKPTNVELKKLFPRKKIGKVTETSLSANQERT**EK**S***
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDRAKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNMDGRVNALYSTPSIYTDAKYASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSETGHNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYTEAEEVVATALACLVDSPSDNGCGRSTTRFQQCPLLNISYCPASEIDFSNGKNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRNPMVPPKYWLAFPVSVPPLGFSTYTISSVKRGGGHSIRSSIQTFESSDKSTVEVGQGNLKLIFSSDKSKPINYINNKSLVEESVEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWRNSHVTTFSGIDSSYSLPDNVAIITLQELDDGKILLRLAHLYQLGEDNDLSKPTNVELKKLFPRKKIGKVTETSLSANQERTEMEKRDSSGK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query864 2.2.26 [Sep-21-2011]
Q8VHC81007 Lysosomal alpha-mannosida yes no 0.937 0.804 0.391 1e-167
O091591013 Lysosomal alpha-mannosida yes no 0.935 0.797 0.391 1e-165
Q60HE91012 Lysosomal alpha-mannosida N/A no 0.937 0.800 0.388 1e-164
O464321007 Lysosomal alpha-mannosida N/A no 0.937 0.804 0.386 1e-164
O007541011 Lysosomal alpha-mannosida yes no 0.936 0.800 0.386 1e-164
Q29451999 Lysosomal alpha-mannosida yes no 0.916 0.792 0.383 1e-158
P340981010 Lysosomal alpha-mannosida yes no 0.944 0.807 0.369 1e-158
O547821018 Epididymis-specific alpha no no 0.915 0.777 0.255 3e-66
P270461150 Alpha-mannosidase 2 OS=Mu no no 0.767 0.576 0.279 4e-66
Q167061144 Alpha-mannosidase 2 OS=Ho no no 0.787 0.594 0.276 8e-66
>sp|Q8VHC8|MA2B1_CAVPO Lysosomal alpha-mannosidase OS=Cavia porcellus GN=MAN2B1 PE=1 SV=1 Back     alignment and function desciption
 Score =  590 bits (1520), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 344/878 (39%), Positives = 488/878 (55%), Gaps = 68/878 (7%)

Query: 2   QHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGV--TPRIGWQI 59
           Q  V++LV  G+LEF NGG  M+DEA THY  ++DQ TLG RF+++ FG    PR+ W I
Sbjct: 134 QEVVRRLVRQGRLEFANGGWVMNDEAATHYGAIVDQMTLGLRFLEDTFGSDGRPRVAWHI 193

Query: 60  DPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDRAKRKNEKSLEVVWQGSRSLGS-SAQIFA 118
           DPFGHS  QA L  +++GFD  F+GRIDYQD+  RK  + +E+VW+ S SL + +A +F 
Sbjct: 194 DPFGHSREQASLF-AQMGFDGVFFGRIDYQDKLVRKKRREMELVWRASASLKAPAADLFT 252

Query: 119 GAFPENYEPPPGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIM 178
           G  P NY PP G   ++V    P + D+ +  +YN +  V+ F+  A +Q    RTNH +
Sbjct: 253 GVLPNNYGPPEG-LCWDVLCADPPVVDDPRSPEYNAKKLVSYFLQLATAQGRYYRTNHTV 311

Query: 179 WTMGTDFKYQYARTWFRQLDKFIHYVNMD----GRVNALYSTPSIYTDAKYASNESWPLK 234
            TMG+DF+Y+ A TWF+ LDK I  VNM      RV+ LYSTP+ Y      +N +WP+K
Sbjct: 312 MTMGSDFQYENANTWFKNLDKLIQLVNMQQANGSRVHVLYSTPACYLWELNKANLTWPVK 371

Query: 235 TDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSET----GHNTD 290
            DDFFPYAD  H +WTGYFSSRPALKRY ++   +     QLE  +G +      GH   
Sbjct: 372 EDDFFPYADGPHMFWTGYFSSRPALKRYERLSYNFLQVCNQLEAQVGPAANVGPYGHGDS 431

Query: 291 S-LADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYTEAEEVVATALACLVDSPSDNGCG 349
           S L  A+A+ QHHDAV+GT KQHVA+DYA++LA G+   E +++ ALA L  S       
Sbjct: 432 SPLNQAMAVLQHHDAVSGTSKQHVADDYARQLAAGWGPCEVLLSNALAKLSGSKET---- 487

Query: 350 RSTTRFQQCPLLNISYCPASEIDFSNGKNLVIVIYNSLGWKREDIIRIPVANGDVTVFNS 409
                F  C  LNIS CP S+      +   +++YN LG K + ++R+PV  G   + + 
Sbjct: 488 -----FLFCRDLNISICPFSQ----TSERFQVLVYNPLGRKVDRMVRLPVRKGLFLIKDP 538

Query: 410 EGKIIESQLVPPADAFMDLRDYYVRAYLGRNPMVPPKYWLAFPVSVPPLGFSTYTISSVK 469
               + S +V    +               NP       L FP  VP LGFS Y+++ V 
Sbjct: 539 GNNTVPSTVVELTSS--------------GNPE------LLFPALVPALGFSVYSVTRVS 578

Query: 470 RGGGHSIRSSIQTFESSDKSTVEVGQGNLKLIFSSDKS--KPINYINNKSLVEESVEQSY 527
                + RS     +      + +    L+  F  D      I  ++ K  +   V Q++
Sbjct: 579 DQNPQT-RSQHSRPQKYSSPVLSIKNEYLRASFHPDTGLLSMIEVLDRK--LTLPVNQAF 635

Query: 528 SFYPAYNGTNDKAPQNAGAYIFRPNGTFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQV 587
            +Y A  G + ++ Q +GAYIFRP+  +           +++  ++ EVHQ    W  QV
Sbjct: 636 FWYNASVG-DKRSSQASGAYIFRPSQQWPFPVSHLARTRLVKTALVQEVHQNFTAWCSQV 694

Query: 588 TRLYKGKEHVEVEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYR 647
            RLY G+ H+E+E+ VGPIPV D  GKE+++   + LET   F+TDSNGR+ ++R RDYR
Sbjct: 695 VRLYSGQRHLELEWTVGPIPVGDKWGKEIISRFDTPLETGGVFFTDSNGREVLERRRDYR 754

Query: 648 TDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLD 707
             W L   EPVAGNYYP+N  IY+ D K + ++L DR+ GGSS+ DG +ELM+HRRLL D
Sbjct: 755 PSWKLNQTEPVAGNYYPVNSRIYITDGKMQLTVLTDRSQGGSSMSDGSLELMVHRRLLKD 814

Query: 708 DSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGAKWRRTFGQEIYSPPLLAFTEE 767
           D RGV EAL E         G  ++G++   +DT  + A   R   ++    P L     
Sbjct: 815 DGRGVGEALQEPG------SGGWVRGRHLLLLDTAREAAAEHRLLAEKELLAPQLVLAPG 868

Query: 768 DGDSWRNSH-----VTTFSGIDSSYSLPDNVAIITLQELDDGKILLRLAHLYQLGEDN-- 820
            G S+ + H        FSG+     LP +V ++TL       +LLRL H + LGED+  
Sbjct: 869 QGPSYHHDHHEAVPRKQFSGLRR--QLPPSVRLLTLARWGPDTLLLRLEHQFALGEDSSR 926

Query: 821 DLSKPTNVELKKLFPRKKIGKVTETSLSANQERTEMEK 858
           +LS P  ++L+ LF    I ++ ET+L+ANQ R    +
Sbjct: 927 NLSLPVTLDLQDLFSTFTITRLQETTLAANQLRASASR 964
Necessary for the catabolism of N-linked carbohydrates released during glycoprotein turnover.
Cavia porcellus (taxid: 10141)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 4
>sp|O09159|MA2B1_MOUSE Lysosomal alpha-mannosidase OS=Mus musculus GN=Man2b1 PE=2 SV=4 Back     alignment and function description
>sp|Q60HE9|MA2B1_MACFA Lysosomal alpha-mannosidase OS=Macaca fascicularis GN=MAN2B1 PE=2 SV=1 Back     alignment and function description
>sp|O46432|MA2B1_FELCA Lysosomal alpha-mannosidase OS=Felis catus GN=MAN2B1 PE=2 SV=1 Back     alignment and function description
>sp|O00754|MA2B1_HUMAN Lysosomal alpha-mannosidase OS=Homo sapiens GN=MAN2B1 PE=1 SV=3 Back     alignment and function description
>sp|Q29451|MA2B1_BOVIN Lysosomal alpha-mannosidase OS=Bos taurus GN=MAN2B1 PE=1 SV=3 Back     alignment and function description
>sp|P34098|MANA_DICDI Lysosomal alpha-mannosidase OS=Dictyostelium discoideum GN=manA PE=1 SV=2 Back     alignment and function description
>sp|O54782|MA2B2_MOUSE Epididymis-specific alpha-mannosidase OS=Mus musculus GN=Man2b2 PE=2 SV=2 Back     alignment and function description
>sp|P27046|MA2A1_MOUSE Alpha-mannosidase 2 OS=Mus musculus GN=Man2a1 PE=1 SV=2 Back     alignment and function description
>sp|Q16706|MA2A1_HUMAN Alpha-mannosidase 2 OS=Homo sapiens GN=MAN2A1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query864
224131400 1009 predicted protein [Populus trichocarpa] 0.982 0.841 0.781 0.0
440546588 1024 alpha-mannosidase [Prunus persica] 0.993 0.837 0.778 0.0
356561171 1030 PREDICTED: lysosomal alpha-mannosidase-l 0.990 0.831 0.766 0.0
357508425 1082 Lysosomal alpha-mannosidase [Medicago tr 0.983 0.785 0.750 0.0
449452024 1020 PREDICTED: lysosomal alpha-mannosidase-l 0.991 0.840 0.763 0.0
359488553 1025 PREDICTED: lysosomal alpha-mannosidase-l 0.993 0.837 0.761 0.0
255543555 977 lysosomal alpha-mannosidase, putative [R 0.943 0.834 0.756 0.0
255540059 1012 lysosomal alpha-mannosidase, putative [R 0.991 0.846 0.713 0.0
224122176 1012 predicted protein [Populus trichocarpa] 0.991 0.846 0.720 0.0
225456481 1009 PREDICTED: lysosomal alpha-mannosidase [ 0.988 0.846 0.710 0.0
>gi|224131400|ref|XP_002321075.1| predicted protein [Populus trichocarpa] gi|222861848|gb|EEE99390.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1440 bits (3728), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 672/860 (78%), Positives = 768/860 (89%), Gaps = 11/860 (1%)

Query: 1   MQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQID 60
           MQH VKQLV SGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIK +FGVTPR+GWQID
Sbjct: 108 MQHVVKQLVSSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKKDFGVTPRVGWQID 167

Query: 61  PFGHSAVQAYLLGSEVGFDSFFYGRIDYQDRAKRKNEKSLEVVWQGSRSLGSSAQIFAGA 120
           PFGHSAVQAY+LG+E+GFDS F+GRIDYQDRAKRKNEKSLEVVWQ S+S GSSAQIFAGA
Sbjct: 168 PFGHSAVQAYMLGAEIGFDSLFFGRIDYQDRAKRKNEKSLEVVWQASKSFGSSAQIFAGA 227

Query: 121 FPENYEPPPGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWT 180
           FPE+YEPPPGGFYFEVND  P++QD+I LFDYNVQ+RV+DFVAAA+SQANITRTNHIMWT
Sbjct: 228 FPEHYEPPPGGFYFEVNDPSPVVQDDINLFDYNVQERVDDFVAAAVSQANITRTNHIMWT 287

Query: 181 MGTDFKYQYARTWFRQLDKFIHYVNMDGRVNALYSTPSIYTDAKYASNESWPLKTDDFFP 240
           MGTDFKYQYA +WFRQ+DK IHYVNMDGRVNALYSTPSIYTDAK+A+NE WP+KT DFFP
Sbjct: 288 MGTDFKYQYAHSWFRQMDKLIHYVNMDGRVNALYSTPSIYTDAKHATNEHWPVKTGDFFP 347

Query: 241 YADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSETGHNTDSLADALAIAQ 300
           YADRA+ YWTGYF+SRPALKRYV++MSGYYLAARQLEFY GRS  G NTDSLAD+LAIAQ
Sbjct: 348 YADRANGYWTGYFASRPALKRYVRMMSGYYLAARQLEFYNGRSNRGPNTDSLADSLAIAQ 407

Query: 301 HHDAVTGTEKQHVANDYAKRLAIGYTEAEEVVATALACLVDSPSDNGCGRSTTRFQQCPL 360
           HHDAVTGTEKQHVANDYAKRL+IGYTEAE++VA++LACLV+S S  GC RSTT+FQQ   
Sbjct: 408 HHDAVTGTEKQHVANDYAKRLSIGYTEAEKLVASSLACLVESASHTGCQRSTTKFQQA-- 465

Query: 361 LNISYCPASEIDFSNGKNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVP 420
                   +++D S G+NL++V+YN+LGW R+D+I+ PV N +V V +SE + I SQ++P
Sbjct: 466 -------KTQVDLSQGRNLIVVVYNALGWARDDVIQFPVFNENVIVHDSEKREIVSQIIP 518

Query: 421 PADAFMDLRDYYVRAYLGRNPMVPPKYWLAFPVSVPPLGFSTYTISSVKRGGGHSIRSSI 480
            ADAF+ LR+ +V AYLGR+P+  PKYWLAFPVSVPP GFSTY+ISS KR G HS +SS+
Sbjct: 519 IADAFVGLRNSHVNAYLGRSPVGTPKYWLAFPVSVPPFGFSTYSISSAKRAGAHSSKSSV 578

Query: 481 QTFESSDKSTVEVGQGNLKLIFSSDKSKPINYINNKSLVEESVEQSYSFYPAYNGT-NDK 539
            T   S+KS VEVGQGNLKL FS+DK K  NY+N++S V+ESVEQ++SFY  YNGT NDK
Sbjct: 579 YTLR-SEKSAVEVGQGNLKLTFSADKIKHANYVNSRSSVKESVEQTFSFYAGYNGTGNDK 637

Query: 540 APQNAGAYIFRPNGTFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEV 599
            PQN+GAYIFRPNGTF I  E QVPLTVMRGP+LDEVHQ++++WIYQ+TRLYKG+EHVEV
Sbjct: 638 DPQNSGAYIFRPNGTFPINPESQVPLTVMRGPVLDEVHQQVSQWIYQITRLYKGREHVEV 697

Query: 600 EFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVA 659
           EFIVGPIP++DG+GKEV T IT+T+ETNKTFYTDSNGRDFIKRIRDYR DWDLEVN+P A
Sbjct: 698 EFIVGPIPIEDGIGKEVATQITTTMETNKTFYTDSNGRDFIKRIRDYRADWDLEVNQPFA 757

Query: 660 GNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNET 719
           GNYYPINLGIY QD KKEFS+LVDRALGGSS+VDG++ELMLHRRLLLDDSRGVAEALNET
Sbjct: 758 GNYYPINLGIYFQDDKKEFSVLVDRALGGSSLVDGQIELMLHRRLLLDDSRGVAEALNET 817

Query: 720 DCVLDECKGLTIQGKYYFRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWRNSHVTT 779
            CVLD+CKGLTIQGKYY+RID IG+GAKWRR+FGQEIYSP LLAF+EEDGD+W NSHVTT
Sbjct: 818 VCVLDQCKGLTIQGKYYYRIDPIGEGAKWRRSFGQEIYSPLLLAFSEEDGDNWMNSHVTT 877

Query: 780 FSGIDSSYSLPDNVAIITLQELDDGKILLRLAHLYQLGEDNDLSKPTNVELKKLFPRKKI 839
           FSG DSSY LPDNVA++TLQELDDGK+LLRLAHLY++GED DLS  T+VEL+KLFP+KKI
Sbjct: 878 FSGFDSSYILPDNVAVLTLQELDDGKVLLRLAHLYEMGEDKDLSVMTSVELRKLFPKKKI 937

Query: 840 GKVTETSLSANQERTEMEKR 859
           GK  E SLSANQER EMEK+
Sbjct: 938 GKAAEMSLSANQERAEMEKK 957

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|440546588|gb|AGC10269.1| alpha-mannosidase [Prunus persica] Back     alignment and taxonomy information
>gi|356561171|ref|XP_003548858.1| PREDICTED: lysosomal alpha-mannosidase-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|357508425|ref|XP_003624501.1| Lysosomal alpha-mannosidase [Medicago truncatula] gi|355499516|gb|AES80719.1| Lysosomal alpha-mannosidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|449452024|ref|XP_004143760.1| PREDICTED: lysosomal alpha-mannosidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|359488553|ref|XP_002276092.2| PREDICTED: lysosomal alpha-mannosidase-like [Vitis vinifera] gi|296082271|emb|CBI21276.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255543555|ref|XP_002512840.1| lysosomal alpha-mannosidase, putative [Ricinus communis] gi|223547851|gb|EEF49343.1| lysosomal alpha-mannosidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255540059|ref|XP_002511094.1| lysosomal alpha-mannosidase, putative [Ricinus communis] gi|223550209|gb|EEF51696.1| lysosomal alpha-mannosidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224122176|ref|XP_002318770.1| predicted protein [Populus trichocarpa] gi|222859443|gb|EEE96990.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225456481|ref|XP_002280858.1| PREDICTED: lysosomal alpha-mannosidase [Vitis vinifera] gi|297734505|emb|CBI15752.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query864
TAIR|locus:21591431024 AT5G13980 [Arabidopsis thalian 0.982 0.829 0.703 0.0
TAIR|locus:20908171019 AT3G26720 [Arabidopsis thalian 0.983 0.834 0.649 9.5e-311
TAIR|locus:21568571047 AT5G66150 [Arabidopsis thalian 0.702 0.579 0.543 1.5e-184
ZFIN|ZDB-GENE-050327-52982 man2b1 "mannosidase, alpha, cl 0.508 0.447 0.433 3.6e-163
UNIPROTKB|F1PKB21007 MAN2B1 "Uncharacterized protei 0.471 0.404 0.424 1.3e-152
MGI|MGI:1072861013 Man2b1 "mannosidase 2, alpha B 0.466 0.397 0.425 1.3e-152
RGD|30391009 Man2b1 "mannosidase, alpha, cl 0.473 0.405 0.419 9.3e-152
UNIPROTKB|G5E9281010 MAN2B1 "Mannosidase, alpha, cl 0.472 0.403 0.417 3.6e-150
UNIPROTKB|O007541011 MAN2B1 "Lysosomal alpha-mannos 0.472 0.403 0.416 1.2e-149
UNIPROTKB|F1MMX7999 MAN2B1 "Lysosomal alpha-mannos 0.472 0.408 0.424 3.8e-148
TAIR|locus:2159143 AT5G13980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3257 (1151.6 bits), Expect = 0., P = 0.
 Identities = 604/859 (70%), Positives = 719/859 (83%)

Query:     5 VKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGH 64
             VK+L+ SGQLE INGGMCMHDEA  HYIDMIDQTTLGHRFI  EF VTPRIGWQIDPFGH
Sbjct:   113 VKELIHSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRFIIREFNVTPRIGWQIDPFGH 172

Query:    65 SAVQAYLLGSEVGFDSFFYGRIDYQDRAKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPEN 124
             SAVQAYLLG+EVGFDS F+GRIDYQDR KR  EK+LEV+W+GS+SLGSS+QIFAGAFP N
Sbjct:   173 SAVQAYLLGAEVGFDSVFFGRIDYQDREKRYKEKTLEVIWRGSKSLGSSSQIFAGAFPTN 232

Query:   125 YEPPPGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTD 184
             YEPPPGGFY+E+ D  P++QD+  LFDYNVQ+RVN FVAAA+ QANITR NHIM+TMGTD
Sbjct:   233 YEPPPGGFYYEITDDSPVVQDDPDLFDYNVQERVNAFVAAALDQANITRINHIMFTMGTD 292

Query:   185 FKYQYARTWFRQLDKFIHYVNMDGRVNALYSTPSIYTDAKYASNESWPLKTDDFFPYADR 244
             F+YQYA TW+RQ+DK IHYVN+DGRVNA YSTPSIYTDAK+A+NE+WPLKT+D+FPYADR
Sbjct:   293 FRYQYAHTWYRQMDKLIHYVNLDGRVNAFYSTPSIYTDAKHAANEAWPLKTEDYFPYADR 352

Query:   245 AHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSETGHNTDSLADALAIAQHHDA 304
              +AYWTGYF+SRPALKRYV+VMS YYLAARQLEF+ GRS+ G NTDSLADALAIAQHHDA
Sbjct:   353 INAYWTGYFTSRPALKRYVRVMSAYYLAARQLEFFKGRSQKGPNTDSLADALAIAQHHDA 412

Query:   305 VTGTEKQHVANDYAKRLAIGYXXXXXXXXXXLACLVD-SPSDNGCGRSTTRFQQCPLLNI 363
             V+GT KQHVANDYAKRLAIGY          LA L    P+ N        FQQC LLNI
Sbjct:   413 VSGTSKQHVANDYAKRLAIGYVEAESVVATSLAHLTKVDPTLN------PTFQQCLLLNI 466

Query:   364 SYCPASEIDFSNGKNLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPAD 423
             SYCP+SE++ S+GK+L+++ YN LGWKR DI+R+PV  GDV+V +SEG  +ESQLVP  D
Sbjct:   467 SYCPSSEVNLSDGKSLIVLAYNPLGWKRVDIVRLPVVGGDVSVHDSEGHEVESQLVPFTD 526

Query:   424 AFMDLRDYYVRAYLGRNPMVPPKYWLAFPVSVPPLGFSTYTISSVKRGGGHSIRSSIQTF 483
              ++ LR Y+V AYLG++P   PKYWL F V+VPPLGF+TYTIS+ K+  G+S +S +   
Sbjct:   527 EYVALRKYHVEAYLGQSPTQVPKYWLVFSVTVPPLGFTTYTISTAKKTDGYSSKSYVSNI 586

Query:   484 ESSDKSTVEVGQGNLKLIFSSDKSKPINYINNKSLVEESVEQSYSFYPAYNGTNDKAP-- 541
                ++S + +G G+LKL FS+D+   INY+N ++ + E V+Q++S+Y AYNG+NDK P  
Sbjct:   587 LKGEQSIINIGHGHLKLSFSTDQGTAINYVNGRTSMTEPVKQTFSYYSAYNGSNDKEPLI 646

Query:   542 -QNAGAYIFRPNGTFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVE 600
              QN+GAY+FRPNGTF I  EGQVPLTV+ GP++DEVHQ+IN WI Q+TR+YKGKEHVEVE
Sbjct:   647 PQNSGAYVFRPNGTFPINPEGQVPLTVIHGPLVDEVHQQINPWISQITRVYKGKEHVEVE 706

Query:   601 FIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAG 660
             FIVG IP+DDG+GKEVVT I+S+L++NKTFYTDS+GRD+IKRIRDYR+DW L+VN+P+AG
Sbjct:   707 FIVGNIPIDDGIGKEVVTQISSSLKSNKTFYTDSSGRDYIKRIRDYRSDWKLDVNQPIAG 766

Query:   661 NYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETD 720
             NYYPIN GIY+QD KKEFS++VDRA GGSSIVDG+VELMLHRRLLLDDSRGVAE LNET 
Sbjct:   767 NYYPINHGIYLQDSKKEFSVMVDRAFGGSSIVDGQVELMLHRRLLLDDSRGVAENLNETV 826

Query:   721 CVLDECKGLTIQGKYYFRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWRNSHVTTF 780
             CV D+C GLTIQGKYY+RID  G+GAKWRRTFGQEIYSP LLAF ++D     +    +F
Sbjct:   827 CVQDKCTGLTIQGKYYYRIDPYGEGAKWRRTFGQEIYSPLLLAFAQQDDGKPMSFGAASF 886

Query:   781 SGIDSSYSLPDNVAIITLQELDDGKILLRLAHLYQLGEDNDLSKPTNVELKKLFPRKKIG 840
             SGID SYSLPDNVA++TLQELDDG +LLRLAHLY++ ED +LS   +VELKKLFP KKIG
Sbjct:   887 SGIDPSYSLPDNVALLTLQELDDGNVLLRLAHLYEVEEDKELSGVASVELKKLFPGKKIG 946

Query:   841 KVTETSLSANQERTEMEKR 859
             K+TE SLSANQER+ MEK+
Sbjct:   947 KLTEMSLSANQERSTMEKK 965
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0004559 "alpha-mannosidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0006013 "mannose metabolic process" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0015923 "mannosidase activity" evidence=IEA
GO:0030246 "carbohydrate binding" evidence=IEA
GO:0005773 "vacuole" evidence=IDA
GO:0005618 "cell wall" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0007020 "microtubule nucleation" evidence=RCA
GO:0019344 "cysteine biosynthetic process" evidence=RCA
TAIR|locus:2090817 AT3G26720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156857 AT5G66150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050327-52 man2b1 "mannosidase, alpha, class 2B, member 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1PKB2 MAN2B1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:107286 Man2b1 "mannosidase 2, alpha B1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|3039 Man2b1 "mannosidase, alpha, class 2B, member 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|G5E928 MAN2B1 "Mannosidase, alpha, class 2B, member 1, isoform CRA_a" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|O00754 MAN2B1 "Lysosomal alpha-mannosidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1MMX7 MAN2B1 "Lysosomal alpha-mannosidase D peptide" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O00754MA2B1_HUMAN3, ., 2, ., 1, ., 2, 40.38620.93630.8001yesno
Q8VHC8MA2B1_CAVPO3, ., 2, ., 1, ., 2, 40.39170.93750.8043yesno
P34098MANA_DICDI3, ., 2, ., 1, ., 2, 40.36980.94440.8079yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query864
cd10810278 cd10810, GH38N_AMII_LAM_like, N-terminal catalytic 1e-118
PLN027011050 PLN02701, PLN02701, alpha-mannosidase 6e-81
cd00451258 cd00451, GH38N_AMII_euk, N-terminal catalytic doma 9e-68
pfam01074269 pfam01074, Glyco_hydro_38, Glycosyl hydrolases fam 4e-63
cd10809340 cd10809, GH38N_AMII_GMII_SfManIII_like, N-terminal 2e-43
cd10811326 cd10811, GH38N_AMII_Epman_like, N-terminal catalyt 2e-41
pfam07748379 pfam07748, Glyco_hydro_38C, Glycosyl hydrolases fa 3e-40
cd11666344 cd11666, GH38N_Man2A1, N-terminal catalytic domain 4e-39
cd11667344 cd11667, GH38N_Man2A2, N-terminal catalytic domain 6e-36
cd10786251 cd10786, GH38N_AMII_like, N-terminal catalytic dom 3e-29
smart0087279 smart00872, Alpha-mann_mid, Alpha mannosidase, mid 9e-22
pfam0926182 pfam09261, Alpha-mann_mid, Alpha mannosidase, midd 1e-20
cd10789252 cd10789, GH38N_AMII_ER_cytosolic, N-terminal catal 4e-07
>gnl|CDD|212121 cd10810, GH38N_AMII_LAM_like, N-terminal catalytic domain of lysosomal alpha-mannosidase and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information 
 Score =  360 bits (926), Expect = e-118
 Identities = 118/208 (56%), Positives = 144/208 (69%), Gaps = 4/208 (1%)

Query: 1   MQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGV--TPRIGWQ 58
            + +VK+LV +GQLEFINGG CM+DEA THY D+IDQ TLGH+F+K+ FG    PR+GWQ
Sbjct: 73  TRQKVKKLVKNGQLEFINGGWCMNDEATTHYEDIIDQMTLGHQFLKDTFGECARPRVGWQ 132

Query: 59  IDPFGHSAVQAYLLGSEVGFDSFFYGRIDYQDRAKRKNEKSLEVVWQGSRSLGSSAQIFA 118
           IDPFGHS  QA L     GFD  F+GRIDYQD+A+R   K +E +W+GS SLG  A IF 
Sbjct: 133 IDPFGHSRTQASLFAQM-GFDGLFFGRIDYQDKAQRLKNKEMEFIWRGSPSLGPDADIFT 191

Query: 119 GAFPENYEPPPGGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAAISQANITRTNHIM 178
           G    +Y PPPG F F++      IQD+  L DYNV +RV+DFV  A  QA   RTNHIM
Sbjct: 192 GVLYNHYGPPPG-FCFDILCGDEPIQDDPNLEDYNVDERVDDFVQYAKEQAQHYRTNHIM 250

Query: 179 WTMGTDFKYQYARTWFRQLDKFIHYVNM 206
            TMG+DF+YQ A  WF+ +DK I YVN 
Sbjct: 251 LTMGSDFQYQNAEMWFKNMDKLIKYVNK 278

The subfamily is represented by lysosomal alpha-mannosidase (LAM, Man2B1, EC 3.2.1.114), which is a broad specificity exoglycosidase hydrolyzing all known alpha 1,2-, alpha 1,3-, and alpha 1,6-mannosidic linkages from numerous high mannose type oligosaccharides. LAM is expressed in all tissues and in many species. In mammals, the absence of LAM can cause the autosomal recessive disease alpha-mannosidosis. LAM has an acidic pH optimum at 4.0-4.5. It is stimulated by zinc ion and is inhibited by cobalt ion and plant alkaloids, such as swainsonine (SW). LAM catalyzes hydrolysis by a double displacement mechanism in which a glycosyl-enzyme intermediate is formed and hydrolyzed via oxacarbenium ion-like transition states. A carboxylic acid in the active site acts as the catalytic nucleophile in the formation of the covalent intermediate while a second carboxylic acid acts as a general acid catalyst. The same residue is thought to assist in the hydrolysis (deglycosylation) step, this time acting as a general base. Length = 278
>gnl|CDD|178304 PLN02701, PLN02701, alpha-mannosidase Back     alignment and domain information
>gnl|CDD|212095 cd00451, GH38N_AMII_euk, N-terminal catalytic domain of eukaryotic class II alpha-mannosidases; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|216284 pfam01074, Glyco_hydro_38, Glycosyl hydrolases family 38 N-terminal domain Back     alignment and domain information
>gnl|CDD|212120 cd10809, GH38N_AMII_GMII_SfManIII_like, N-terminal catalytic domain of Golgi alpha-mannosidase II, Spodoptera frugiperda Sf9 alpha-mannosidase III, and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212122 cd10811, GH38N_AMII_Epman_like, N-terminal catalytic domain of mammalian core-specific lysosomal alpha 1,6-mannosidase and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|219551 pfam07748, Glyco_hydro_38C, Glycosyl hydrolases family 38 C-terminal domain Back     alignment and domain information
>gnl|CDD|212131 cd11666, GH38N_Man2A1, N-terminal catalytic domain of Golgi alpha-mannosidase II and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212132 cd11667, GH38N_Man2A2, N-terminal catalytic domain of Golgi alpha-mannosidase IIx, and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|212098 cd10786, GH38N_AMII_like, N-terminal catalytic domain of class II alpha-mannosidases and similar proteins; glycoside hydrolase family 38 (GH38) Back     alignment and domain information
>gnl|CDD|214875 smart00872, Alpha-mann_mid, Alpha mannosidase, middle domain Back     alignment and domain information
>gnl|CDD|220157 pfam09261, Alpha-mann_mid, Alpha mannosidase, middle domain Back     alignment and domain information
>gnl|CDD|212101 cd10789, GH38N_AMII_ER_cytosolic, N-terminal catalytic domain of endoplasmic reticulum(ER)/cytosolic class II alpha-mannosidases; glycoside hydrolase family 38 (GH38) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 864
KOG1959996 consensus Glycosyl hydrolase, family 38 - alpha-ma 100.0
PLN027011050 alpha-mannosidase 100.0
KOG19581129 consensus Glycosyl hydrolase, family 38 - alpha-ma 100.0
PRK09819875 alpha-mannosidase; Provisional 100.0
KOG43421078 consensus Alpha-mannosidase [Carbohydrate transpor 100.0
COG0383943 AMS1 Alpha-mannosidase [Carbohydrate transport and 100.0
PF01074275 Glyco_hydro_38: Glycosyl hydrolases family 38 N-te 100.0
PF07748457 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-t 100.0
PF0926180 Alpha-mann_mid: Alpha mannosidase, middle domain; 99.87
smart0087279 Alpha-mann_mid Alpha mannosidase, middle domain. M 99.84
COG0383943 AMS1 Alpha-mannosidase [Carbohydrate transport and 99.37
PF03065360 Glyco_hydro_57: Glycosyl hydrolase family 57; Inte 97.62
PF01522123 Polysacc_deac_1: Polysaccharide deacetylase; Inter 94.74
TIGR03212297 uraD_N-term-dom putative urate catabolism protein. 94.15
COG1543504 Uncharacterized conserved protein [Function unknow 93.38
TIGR02764191 spore_ybaN_pdaB polysaccharide deacetylase family 89.93
COG1449615 Alpha-amylase/alpha-mannosidase [Carbohydrate tran 88.07
TIGR02884224 spore_pdaA delta-lactam-biosynthetic de-N-acetylas 87.71
TIGR02873268 spore_ylxY probable sporulation protein, polysacch 83.04
>KOG1959 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.1e-199  Score=1640.22  Aligned_cols=831  Identities=50%  Similarity=0.835  Sum_probs=757.2

Q ss_pred             ChHHHHHHHHcCCeEEecceeeecccCCCCHHHHHHHHHHHHHHHHhHhC--CCCceeeecCCCCCchHHHHHHHhhcCC
Q 002938            1 MQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFG--VTPRIGWQIDPFGHSAVQAYLLGSEVGF   78 (864)
Q Consensus         1 ~k~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~l~~~fG--~~p~vgW~iD~FGhs~~~p~ll~~~~G~   78 (864)
                      +|+.||+||++||||||||||||+|||++||.++|+||+.||+||.++||  .+|++||||||||||+.+|+|| ++|||
T Consensus       109 ~k~~Vk~LV~~GrLEFi~Ggw~MnDEA~~hY~dvIDQ~TlGlrfL~~tFG~cgrPrvgWqIDPFGHSreqAslf-AqmGf  187 (996)
T KOG1959|consen  109 QKEQVKKLVNEGRLEFIGGGWSMNDEATTHYQDVIDQFTLGLRFLKDTFGECGRPRVGWQIDPFGHSREQASLF-AQMGF  187 (996)
T ss_pred             HHHHHHHHHhcCCEEEecCeeeecchhhhhHHHHHHHHHHHHHHHHHHhcccCCcceeeeeCCCCcchHHHHHH-HHhCc
Confidence            47899999999999999999999999999999999999999999999999  8999999999999999999999 99999


Q ss_pred             cEEeEeccchHhHHhhccCCceEEEEecCCCCCCCcceeEeeCCCCCCCCCCCccccccCCCCccccCcccccCCHHHHH
Q 002938           79 DSFFYGRIDYQDRAKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPENYEPPPGGFYFEVNDKYPIIQDNIKLFDYNVQDRV  158 (864)
Q Consensus        79 ~~~~~~R~~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~th~~~~~Y~~p~~~f~f~~~~~~~~~~~~~~~~~~nv~~~~  158 (864)
                      |+++|+||||+||+.|..++.|||+|+|++++++.++|||++|+.+|++| +|||||+.|.+.|++|++.+.++||++|+
T Consensus       188 d~~fFaRiDy~dK~~R~~~~~lE~iW~~S~sL~~~~~iFTg~l~n~Y~~P-~gfc~dv~c~d~Pi~D~~~~~d~NVkerV  266 (996)
T KOG1959|consen  188 DGVFFARIDYQDKAKRMKEKTLEMIWRGSESLGSSSQIFTGALYNHYSPP-PGFCFDVLCGDDPIIDGPRSYDYNVKERV  266 (996)
T ss_pred             cchheeecchhhHHHHHhhccceEEeecCccccchhhhhhhccccCCCCC-CCceeccccCCCCCCCCCCCCCccHHHHH
Confidence            99999999999999999999999999999999999999999999999999 89999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhccCCCeEEEeecCCCCccchHHHHHHHHHHHHHHhc---CC-cEEEEEcCccchHHHHhhcCCCCCcc
Q 002938          159 NDFVAAAISQANITRTNHIMWTMGTDFKYQYARTWFRQLDKFIHYVNM---DG-RVNALYSTPSIYTDAKYASNESWPLK  234 (864)
Q Consensus       159 ~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~~~~~~~li~~iN~---~~-~~~i~~sT~~~Yf~a~~~~~~~~p~~  234 (864)
                      +.|++.++.++..|+|||||+|||+||+|.+|..||+||||||+|+|+   .+ .+++.||||+||++++|+.+..||++
T Consensus       267 d~Fv~~a~~~a~~~RtnHim~~MG~DFqY~~A~v~fknmDkLI~yVN~~qa~gs~vnv~YSTpscYl~alh~~~~Twp~K  346 (996)
T KOG1959|consen  267 DDFVAYAKNQAAYYRTNHIMWPMGDDFQYENANVWFKNMDKLIKYVNERQADGSKVNVFYSTPSCYLNALHAANQTWPVK  346 (996)
T ss_pred             HHHHHHHHHhHhheecceEEEeccCCceehhhhHHHhhHHHHHHHhhhhhcCCceEEEEEcChHHHHHHHHHhcCccccc
Confidence            999999999999999999999999999999999999999999999994   34 89999999999999999999999999


Q ss_pred             cCCCccccccCCCceeeeeechhhHHHHHHHHhHHHHHHHHHHHhhccCC--CCCchHHHHHHHHHHcccccccCCcchh
Q 002938          235 TDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGRSE--TGHNTDSLADALAIAQHHDAVTGTEKQH  312 (864)
Q Consensus       235 ~gdf~~y~~~~~~yWtG~yTSr~~~K~~~R~~e~~L~~aE~l~~l~~~~~--~~~~~~~lw~~l~~~QhHDaItGTs~~~  312 (864)
                      +.|||||++++++||||||||||.+|++.|+++++|++|++|.++|++..  ..+.++.|+++|++.|||||||||+|++
T Consensus       347 t~DFFPYa~~~~syWTGyFTSRPa~Kr~~R~~s~~lq~akQL~~la~l~~~~~~~dl~~Lream~i~QHHDAVTGTekq~  426 (996)
T KOG1959|consen  347 TDDFFPYASEPHSYWTGYFTSRPALKRFERDGSHYLQVAKQLSVLAGLSSTEQGPDLDYLREAMAIMQHHDAVTGTEKQH  426 (996)
T ss_pred             ccccCcCCCCCCcceeeeccccHHHHHHHhhhhHHHHHHHHHhhhcCCCccccCccHHHHHHHHHHHhhcccccccchhh
Confidence            99999999999999999999999999999999999999999999998754  5678999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccccccccccCCCcccccCCCCeEEEEEEcCCCceEE
Q 002938          313 VANDYAKRLAIGYTEAEEVVATALACLVDSPSDNGCGRSTTRFQQCPLLNISYCPASEIDFSNGKNLVIVIYNSLGWKRE  392 (864)
Q Consensus       313 V~~dy~~rl~~~~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~ln~s~~~~~~~~~~~~~~~~v~v~Npl~~~r~  392 (864)
                      |.+||+++|..|+..|+.+++.+|+.|....        ..+|++|.+||+|+||.++.   .++.+.|+|||||+|.++
T Consensus       427 Va~DY~r~La~g~~~~e~~~~~aL~~lt~~~--------~~~f~~C~~lNiS~C~~t~~---~~~~~~v~~YNpLa~~~t  495 (996)
T KOG1959|consen  427 VADDYARRLADGILGAEKLARDALRKLTNLP--------NGEFQSCLLLNISECAFTKD---GADNFIVTLYNPLAHTVT  495 (996)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC--------CccchhhhhhccccCCCCcC---CcCcEEEEEEcCCcceee
Confidence            9999999999999999999999999998643        34799999999999999863   357789999999999999


Q ss_pred             EEEEEEeeCCcEEEEccCCcEEeEEEcCCccccccchhhhhhhccCCCCCCCCcEEEEEEeecCCCceEEEEEEecCCCC
Q 002938          393 DIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRNPMVPPKYWLAFPVSVPPLGFSTYTISSVKRGG  472 (864)
Q Consensus       393 ~~v~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~vPplG~~~y~i~~~~~~~  472 (864)
                      ++|+|||+.+++.|+|.+|++|++|++|.......+.          .+.....|+|+|.+.|||+|+++|.|+....+.
T Consensus       496 ~~VRiPV~~~~~~V~D~~G~~v~Sqivp~~~~~~al~----------~~~~~~~~eLvf~asvpplg~aty~i~k~~~~~  565 (996)
T KOG1959|consen  496 QYVRIPVKEENYRVTDEKGRTVPSQIVPVPWQVLALE----------SRNNDTKHELVFKASVPPLGIATYFIKKVASTE  565 (996)
T ss_pred             eEEEEeccCCCeEEECCCCCCcccceeccchhhhhhh----------ccccCCCceEEEEEEecCccceEEEEeecCccc
Confidence            9999999999999999999999999999876443331          123345799999999999999999999765543


Q ss_pred             CccccccceecccCCCCceEEecceEEEEEeCCCCCeEEEEecCCceEEEEEEeEEEecccCCCCCCCCCCCcceEEccC
Q 002938          473 GHSIRSSIQTFESSDKSTVEVGQGNLKLIFSSDKSKPINYINNKSLVEESVEQSYSFYPAYNGTNDKAPQNAGAYIFRPN  552 (864)
Q Consensus       473 ~~~~~s~~~~~~~~~~~~~~ieN~~~~v~~~~~~G~l~si~~k~~g~~~~~~~~~~~Y~~~~g~~~~~~~~sgaY~F~P~  552 (864)
                      ..+ .+.+..........+.|+|+++++.||.++|.++++..+.+|.+..+.|+|.+|..+.|++  +.+.||||+|+| 
T Consensus       566 ~~~-~~~~~~i~~~~~n~~~V~n~~~kl~fd~~tG~l~~v~~n~t~~t~~V~Q~f~~Y~~~~g~n--~~q~SgAYiFRp-  641 (996)
T KOG1959|consen  566 RGS-ASHVRNIKKRESNATEVGNSHLKLVFDNDTGLLKTVEMNQTGVTENVDQEFGYYKGYRGDN--DKQASGAYIFRP-  641 (996)
T ss_pred             ccc-cccccccccccCcceEeccceEEEEEcCCCCceEEEEecccCcceeeeeeeEEEEeecCCc--CCccCcceEecC-
Confidence            210 1111111123334489999999999998889999999988999999999999999887732  358899999999 


Q ss_pred             CCceeccC-CcccEEEEEcCceEEEEEEEcceEEEEEEEecCCCeEEEEEEEccccccCCCCcEEEEEEEeecCCCCeEE
Q 002938          553 GTFFIKSE-GQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVGPIPVDDGLGKEVVTHITSTLETNKTFY  631 (864)
Q Consensus       553 ~~~~~~~~-~~~~i~v~~G~l~~~v~~~~~~~i~~~vrL~~~~~~ie~e~~v~~i~~~~~~~~e~~~~f~t~i~s~~~fy  631 (864)
                      +..++++. ....++|+.|||+.||++.++.|++|++|+|++.+++||||.|+|||++++.|||++.||.|+|.|++.||
T Consensus       642 ~~~~~~~~~~~vel~vv~G~LV~EVhQ~f~~wiSQviRvy~g~~~~E~Ew~VGpIp~~d~~gkEvVtr~~t~i~S~g~fY  721 (996)
T KOG1959|consen  642 GQADIPIVSDQVELTVVDGPLVKEVHQQFNPWISQVIRVYEGKNHVEFEWLVGPIPIDDGIGKEVVTRFSTEISSNGVFY  721 (996)
T ss_pred             CCCCccccccceEEEEecCchHHHHHHHHHHHHhheeEecCCCcceEEEEEecceecCCCccceEEEEeccccccCceEE
Confidence            44444443 35788999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EcCcccceeecccccCCCCcccCCCccccceeecCceEeEEeCCceeEEEecCCcccccccCceEEEEEEeeccccCCcc
Q 002938          632 TDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRG  711 (864)
Q Consensus       632 tDsnG~~~ikR~~~~~~~w~~~~~~pv~~nyYP~~s~~~i~D~~~~ltvl~dr~~G~sS~~~G~iElml~Rr~~~dD~rG  711 (864)
                      |||||+|||||.+++|++|....++||+||||||++.|+|+|++.+|+|||||+|||||++||+||||||||++.||+||
T Consensus       722 TDSNGRe~~kR~~d~r~~~~~~~~epiAGNYYPvt~~i~lqD~~~rl~vL~DRAqGgsSl~dG~lElMLHRRl~~DD~~G  801 (996)
T KOG1959|consen  722 TDSNGREMIKRVRDKREDFVLDVNEPIAGNYYPVTSRIYLQDSKKRLSVLNDRAQGGSSLKDGQLELMLHRRLLNDDGRG  801 (996)
T ss_pred             ecCcHHHHHHHHhcccCCCccccCccccccccccceeeEEecCCceEEEEeecccCCccccCCeEEEEeeehhhcccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccCCeEEEeEEEEEeecCCCcc-cccccchhhhcCCceeeeeccCCCcccCCcccccccCCCCCCCC
Q 002938          712 VAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGA-KWRRTFGQEIYSPPLLAFTEEDGDSWRNSHVTTFSGIDSSYSLP  790 (864)
Q Consensus       712 vge~l~e~~~~~~~~~g~~~~~~~~l~l~~~~~~~-~~~r~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~s~l~~~~~lp  790 (864)
                      |||+|||+.++   ..||+++|+|+++|++...++ ..+|...+++..|.+.+|++..+..+........+.+..+..||
T Consensus       802 v~EaLnEt~~~---~~gL~~rGk~~~~l~~~~d~a~~~~r~~~~ei~~P~~~~f~~~~~~~~~~~~s~~~~~f~~~~~lP  878 (996)
T KOG1959|consen  802 VGEALNETVYG---HAGLIARGKLYVLLDKAGDGATGWRRLAEQEIHLPLWKFFSKPEGGEALNSLSIPGSAFSGSYDLP  878 (996)
T ss_pred             cchhccccccc---ccceEEeeeEEEEEecccccchhhhhhhhhhcccHHHHHhhcCCCccchhhcCCCccccccccCCC
Confidence            99999999886   379999999999999887765 56677889999999999998766544443322222232245899


Q ss_pred             CceeEEEeEeeCCCcEEEEEeecccccCCCCCCcceeeeccccCCCCCcceEEEcccccccccchhhhcCC
Q 002938          791 DNVAIITLQELDDGKILLRLAHLYQLGEDNDLSKPTNVELKKLFPRKKIGKVTETSLSANQERTEMEKRDS  861 (864)
Q Consensus       791 ~nvhlltl~~~~~~~~llR~~~l~~~~~~~~~s~~~~v~l~~lf~~~~~~~~~etsLtg~~~~~~~~~~~~  861 (864)
                      .+|||+||++|+++.+||||+|+|++|||+++|++++|||.+||..+.|..|+||||+||+++++|++.|+
T Consensus       879 ~~vhLlTLe~~~~~~vLlRleh~~e~gED~~~s~vvsfnl~~lf~~~~i~~i~EttL~gN~~ls~mkr~k~  949 (996)
T KOG1959|consen  879 QSVHLLTLEEWSKDEVLLRLEHLYEVGEDSELSQVVSFNLRKLFSALDIVEIRETTLDGNQPLSDMKRFKF  949 (996)
T ss_pred             cceeeeecccCCCCceEeeehhhhhcccccccCcceEEEhHHhhcccCeeEEEEeeccCccChhhhhhhcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999965544

>PLN02701 alpha-mannosidase Back     alignment and domain information
>KOG1958 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09819 alpha-mannosidase; Provisional Back     alignment and domain information
>KOG4342 consensus Alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01074 Glyco_hydro_38: Glycosyl hydrolases family 38 N-terminal domain; InterPro: IPR000602 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF07748 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-terminal domain; InterPro: IPR011682 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF09261 Alpha-mann_mid: Alpha mannosidase, middle domain; InterPro: IPR015341 Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold Back     alignment and domain information
>smart00872 Alpha-mann_mid Alpha mannosidase, middle domain Back     alignment and domain information
>COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03065 Glyco_hydro_57: Glycosyl hydrolase family 57; InterPro: IPR004300 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF01522 Polysacc_deac_1: Polysaccharide deacetylase; InterPro: IPR002509 This domain is found in polysaccharide deacetylase Back     alignment and domain information
>TIGR03212 uraD_N-term-dom putative urate catabolism protein Back     alignment and domain information
>COG1543 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB Back     alignment and domain information
>COG1449 Alpha-amylase/alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase Back     alignment and domain information
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query864
3dx3_A1045 Golgi Alpha-Mannosidase Ii In Complex With Mannosta 3e-65
1qwn_A1045 Golgi Alpha-Mannosidase Ii Covalent Intermediate Co 5e-65
1ps3_A1045 Golgi Alpha-mannosidase Ii In Complex With Kifunens 6e-65
1hxk_A1015 Golgi Alpha-Mannosidase Ii In Complex With Deoxyman 8e-65
1qwu_A1045 Golgi Alpha-Mannosidase Ii D341n Mutant Complex Wit 2e-64
3cv5_A1045 Golgi Mannosidase Ii D204a Catalytic Nucleophile Mu 3e-64
1hty_A1015 Golgi Alpha-Mannosidase Ii Length = 1015 7e-61
1o7d_D282 The Structure Of The Bovine Lysosomal A-Mannosidase 5e-52
1o7d_A298 The Structure Of The Bovine Lysosomal A-Mannosidase 3e-47
1o7d_C159 The Structure Of The Bovine Lysosomal A-Mannosidase 2e-16
1o7d_B84 The Structure Of The Bovine Lysosomal A-Mannosidase 4e-16
1o7d_E126 The Structure Of The Bovine Lysosomal A-Mannosidase 4e-06
>pdb|3DX3|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Mannostatin Analog (1r,2r, 3s,4r,5r)-5-Aminocyclopentane-1,2,3,4-Tetraol Length = 1045 Back     alignment and structure 
Iteration: 1

 Score =  246 bits (628), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 207/772 (26%), Positives = 337/772 (43%), Gaps = 82/772 (10%)
Query: 4   EVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFG 63
           ++K +V +GQLEF+ GG  M DEA +H+ +++ Q T G  ++K    VTP   W IDPFG
Sbjct: 148 QMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTASWAIDPFG 207
Query: 64  HSAVQAYLLGSEVGFDSFFYGRIDYQDRAKRKNEKSLEVVW------QGSRSLGSSAQIF 117
           HS    Y+L  + GF +    R  Y  + +   ++ LE +W      +G  +L +    F
Sbjct: 208 HSPTMPYIL-QKSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPF 266
Query: 118 -AGAFPENYEPPP-----------GGFYFEVNDKYPIIQDNIKLFDYNVQDRVNDFVAAA 165
            +   P    P P           G F      K P       + D NV  R +  V   
Sbjct: 267 YSYDIPHTCGPDPKVCCQFDFKRMGSFGLSCPWKVP----PRTISDQNVAARSDLLVDQW 322
Query: 166 ISQANITRTNHIMWTMGTDFKYQYARTWFRQ---LDKFIHYVNMDGRVN--ALYSTPSIY 220
             +A + RTN ++  +G DF+++    W  Q    ++   ++N     N  A + T   Y
Sbjct: 323 KKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQFGTLQEY 382
Query: 221 TDAKY----ASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQL 276
            DA +    A    +P  + DFF YADR+  YW+GY++SRP  KR  +V+  Y  AA  L
Sbjct: 383 FDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRAAEML 442
Query: 277 EFYIGRSETGHNTDSLADA---LAIAQHHDAVTGTEKQHVANDYAKRLAIGYXXXXXXXX 333
             +          + L  A   L++ QHHD +TGT K HV  DY +R+            
Sbjct: 443 SAWHSWDGMARIEERLEQARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQ 502
Query: 334 XXLACLVDSPSDNGCGRSTTRFQQCPLLNISYCPASEIDFSN-----GKNLV----IVIY 384
             +  L+  PS      S + F     L+ S  P S ++ S      G++++    +V++
Sbjct: 503 QSVYRLLTKPSIYSPDFSFSYFT----LDDSRWPGSGVEDSRTTIILGEDILPSKHVVMH 558
Query: 385 NSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRNPMVP 444
           N+L   RE ++   V++  V+V +     +E+Q+ P      D     +           
Sbjct: 559 NTLPHWREQLVDFYVSSPFVSVTDLANNPVEAQVSPVWSWHHDTLTKTIHPQGSTT---- 614
Query: 445 PKYWLAFPVSVPPLGFSTYTISSVKRGGGHSIRSSIQTFESSDKSTVEVGQGNLKLIFSS 504
            KY + F   VPP+G +TY ++       H+  +S       + +++ +GQ    + F  
Sbjct: 615 -KYRIIFKARVPPMGLATYVLTISDSKPEHTSYAS-NLLLRKNPTSLPLGQYPEDVKFGD 672
Query: 505 DKSKPINYINNKSLV-------------EESVEQSYSFYPAYNGTNDKAPQNAGAYIFRP 551
            +   +   N  +L              ++S      F     G        +GAY+F P
Sbjct: 673 PREISLRVGNGPTLAFSEQGLLKSIQLTQDSPHVPVHFKFLKYGVRSHG-DRSGAYLFLP 731
Query: 552 NGTFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVGPIPVDDG 611
           NG       GQ  + V +G +   V   +   ++Q T +  G   +     +G +     
Sbjct: 732 NGPASPVELGQPVVLVTKGKLESSVSVGLPSVVHQ-TIMRGGAPEIRNLVDIGSLD---- 786
Query: 612 LGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYM 671
              E+V  + + +++   FYTD NG  FIKR R  +         P+  NYYPI  G+++
Sbjct: 787 -NTEIVMRLETHIDSGDIFYTDLNGLQFIKRRRLDKL--------PLQANYYPIPSGMFI 837
Query: 672 QDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVL 723
           +D     +LL  + LGGSS+  GE+E+M  RRL  DD RG+ + + +   VL
Sbjct: 838 EDANTRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLGQGVLDNKPVL 889
>pdb|1QWN|A Chain A, Golgi Alpha-Mannosidase Ii Covalent Intermediate Complex With 5- Fluoro-Gulosyl-Fluoride Length = 1045 Back     alignment and structure
>pdb|1PS3|A Chain A, Golgi Alpha-mannosidase Ii In Complex With Kifunensine Length = 1045 Back     alignment and structure
>pdb|1HXK|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin Length = 1015 Back     alignment and structure
>pdb|1QWU|A Chain A, Golgi Alpha-Mannosidase Ii D341n Mutant Complex With 5-F-Guloside Length = 1045 Back     alignment and structure
>pdb|3CV5|A Chain A, Golgi Mannosidase Ii D204a Catalytic Nucleophile Mutant Complex With 3alpha,6alpha-Mannopentaose Length = 1045 Back     alignment and structure
>pdb|1HTY|A Chain A, Golgi Alpha-Mannosidase Ii Length = 1015 Back     alignment and structure
>pdb|1O7D|D Chain D, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 282 Back     alignment and structure
>pdb|1O7D|A Chain A, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 298 Back     alignment and structure
>pdb|1O7D|C Chain C, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 159 Back     alignment and structure
>pdb|1O7D|B Chain B, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 84 Back     alignment and structure
>pdb|1O7D|E Chain E, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 126 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query864
3bvx_A1045 Alpha-mannosidase 2; family 38 glycoysl hydrolase, 0.0
1o7d_D282 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 3e-97
3lvt_A899 Glycosyl hydrolase, family 38; PSI, MCSG, structur 2e-80
2wyh_A923 Alpha-mannosidase; hydrolase, glycosidase, glycosi 1e-74
1o7d_A298 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 2e-73
1o7d_C159 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 5e-45
1o7d_B84 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 1e-32
1o7d_E126 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 4e-24
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... Length = 1045 Back     alignment and structure
 Score =  639 bits (1649), Expect = 0.0
 Identities = 216/922 (23%), Positives = 368/922 (39%), Gaps = 99/922 (10%)

Query: 1    MQHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQID 60
             + ++K +V +GQLEF+ GG  M DEA +H+ +++ Q T G  ++K    VTP   W I 
Sbjct: 145  KKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTASWAIA 204

Query: 61   PFGHSAVQAYLLGSEVGFDSFFYGRIDYQDRAKRKNEKSLEVVWQGSRSLGSSAQIFAGA 120
            PFGHS    Y+L  + GF +    R  Y  + +   ++ LE +W+          +F   
Sbjct: 205  PFGHSPTMPYIL-QKSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHM 263

Query: 121  FPENYEPPPG----------GFYFEVNDK----YPIIQDNIKLFDYNVQDRVNDFVAAAI 166
             P      P            F F+         P       + D NV  R +  V    
Sbjct: 264  MPFYSYDIPHTCGPDPKVCCQFDFKRMGSFGLSCPWKVPPRTISDQNVAARSDLLVDQWK 323

Query: 167  SQANITRTNHIMWTMGTDFKYQYARTWFRQ---LDKFIHYVNMDGR--VNALYSTPSIYT 221
             +A + RTN ++  +G DF+++    W  Q    ++   ++N      V A + T   Y 
Sbjct: 324  KKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQFGTLQEYF 383

Query: 222  DA----KYASNESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLE 277
            DA    + A    +P  + DFF YADR+  YW+GY++SRP  KR  +V+  Y  AA  L 
Sbjct: 384  DAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRAAEMLS 443

Query: 278  FYIGRSETGHNTDSLADA---LAIAQHHDAVTGTEKQHVANDYAKRLAIGYTEAEEVVAT 334
             +          + L  A   L++ QHHD +TGT K HV  DY +R+       + V+  
Sbjct: 444  AWHSWDGMARIEERLEQARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQ 503

Query: 335  ALACLVDSPSDNGCGRSTTRFQQCPLLNISYCPASEIDFSN---------GKNLVIVIYN 385
            ++  L+  PS      S         L+ S  P S ++ S            +  +V++N
Sbjct: 504  SVYRLLTKPSIYSPDFSF----SYFTLDDSRWPGSGVEDSRTTIILGEDILPSKHVVMHN 559

Query: 386  SLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRNPMVPP 445
            +L   RE ++   V++  V+V +     +E+Q+ P      D     +            
Sbjct: 560  TLPHWREQLVDFYVSSPFVSVTDLANNPVEAQVSPVWSWHHDTLTKTIHPQGS-----TT 614

Query: 446  KYWLAFPVSVPPLGFSTYTISSVKRGGGHSIRSSIQTFES----------------SDKS 489
            KY + F   VPP+G +TY ++       H+  +S                       D  
Sbjct: 615  KYRIIFKARVPPMGLATYVLTISDSKPEHTSYASNLLLRKNPTSLPLGQYPEDVKFGDPR 674

Query: 490  TVEVGQGNLKLIFSSDKSKPINYINNKSLVEESVEQSYSFYPAYNGTNDKAPQNAGAYIF 549
             + +  GN   +  S++    +    +      V   +  Y   +         +GAY+F
Sbjct: 675  EISLRVGNGPTLAFSEQGLLKSIQLTQDSPHVPVHFKFLKYGVRSHG-----DRSGAYLF 729

Query: 550  RPNGTFFIKSEGQVPLTVMRGPILDEVHQKINEWIYQVTRLYKGKEHVEVEFIVGPIPVD 609
             PNG       GQ  + V +G +   V   +   ++Q   +  G   +     +G +   
Sbjct: 730  LPNGPASPVELGQPVVLVTKGKLESSVSVGLPSVVHQT-IMRGGAPEIRNLVDIGSLD-- 786

Query: 610  DGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGI 669
                 E+V  + + +++   FYTD NG  FIKR R  +         P+  NYYPI  G+
Sbjct: 787  ---NTEIVMRLETHIDSGDIFYTDLNGLQFIKRRRLDK--------LPLQANYYPIPSGM 835

Query: 670  YMQDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGL 729
            +++D     +LL  + LGGSS+  GE+E+M  RRL  DD RG+ + + +   VL   + +
Sbjct: 836  FIEDANTRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLGQGVLDNKPVLHIYRLV 895

Query: 730  ---TIQGKYYFRIDTIGDGAKWRRTFGQEIYSPPLLAFTEEDGDSWRNSHVTTFSGIDSS 786
                       ++   G          Q +  P       E  + W  +    F G    
Sbjct: 896  LEKVNNCVRPSKLHPAGYLTSAAHKASQSLLDPLDKFIFAE--NEWIGAQ-GQFGGDHP- 951

Query: 787  YSLPDNVAIITLQELDDGK-------ILLRLAHLYQLGEDNDLSKPTNVELKKLFPRKKI 839
             S  +++ +  ++ L            +L   +L Q G          +++  L P   +
Sbjct: 952  -SAREDLDVSVMRRLTKSSAKTQRVGYVLHRTNLMQCGTPE--EHTQKLDVCHLLP--NV 1006

Query: 840  GKVTETSLSANQERTEMEKRDS 861
             +   T+L+  Q    ++   +
Sbjct: 1007 ARCERTTLTFLQNLEHLDGMVA 1028
>1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Length = 282 Back     alignment and structure
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis} Length = 899 Back     alignment and structure
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A* Length = 923 Back     alignment and structure
>1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1 Length = 298 Back     alignment and structure
>1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6 Length = 159 Back     alignment and structure
>1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1 Length = 84 Back     alignment and structure
>1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Length = 126 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query864
3bvx_A1045 Alpha-mannosidase 2; family 38 glycoysl hydrolase, 100.0
2wyh_A923 Alpha-mannosidase; hydrolase, glycosidase, glycosi 100.0
3lvt_A899 Glycosyl hydrolase, family 38; PSI, MCSG, structur 100.0
1o7d_D282 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 100.0
1o7d_A298 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 100.0
1o7d_C159 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 99.97
1o7d_B84 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 99.89
1o7d_E126 Lysosomal alpha-mannosidase; hydrolase, glycosyl h 99.72
1k1x_A659 4-alpha-glucanotransferase; 2.40A {Thermococcus li 99.39
3p0b_A540 TT1467 protein; glycoside hydrolase GH57, glycogen 98.58
2b5d_X528 Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2. 98.22
3n98_A562 Alpha-amylase, GH57 family; GH57 family member, br 97.98
3rxz_A300 Polysaccharide deacetylase; structural genomics, P 94.37
3cl6_A308 PUUE allantoinase; URIC acid, nitrogen fixation, h 94.32
3s6o_A321 Polysaccharide deacetylase family protein; ssgcid, 94.29
3qbu_A326 Putative uncharacterized protein; metallo enzyme, 90.81
2cc0_A195 Acetyl-xylan esterase; hydrolase, carbohydrate est 85.54
2y8u_A230 Chitin deacetylase; hydrolase; 1.99A {Emericella n 83.78
2iw0_A254 Chitin deacetylase; hydrolase, chitin DE-N-acetyla 83.47
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... Back     alignment and structure
Probab=100.00  E-value=4.1e-148  Score=1372.13  Aligned_cols=810  Identities=25%  Similarity=0.407  Sum_probs=679.3

Q ss_pred             hHHHHHHHHcCCeEEecceeeecccCCCCHHHHHHHHHHHHHHHHhHhCCCCceeeecCCCCCchHHHHHHHhhcCCcEE
Q 002938            2 QHEVKQLVGSGQLEFINGGMCMHDEAVTHYIDMIDQTTLGHRFIKNEFGVTPRIGWQIDPFGHSAVQAYLLGSEVGFDSF   81 (864)
Q Consensus         2 k~~vk~LV~~GrlE~vgGgwv~~Dea~~~~es~Irql~~G~~~l~~~fG~~p~vgW~iD~FGhs~~~p~ll~~~~G~~~~   81 (864)
                      +++||+||++||||||||||||+|||++||||+||||++||+|++++||+.|++||+|||||||++||||| ++|||+++
T Consensus       146 ~~~vk~lV~~Grle~~gG~Wv~~De~~~~~EslirQl~~G~~~~~~~FG~~~~~~W~pD~FG~s~~lPqil-~~~Gi~~~  224 (1045)
T 3bvx_A          146 KLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTASWAIAPFGHSPTMPYIL-QKSGFKNM  224 (1045)
T ss_dssp             HHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCSSSBCTHHHHHH-HTTTCCEE
T ss_pred             HHHHHHHHhCCCEEEECCccccccccCCCHHHHHHHHHHHHHHHHHHhCCCCceEEcCCCCCccHHHHHHH-HHcCCCeE
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999 99999999


Q ss_pred             eEeccchHhHHhhccCCceEEEEecCCCCCCCcceeEeeCCC-CCCC-----CCC----CccccccCC---CCccccCc-
Q 002938           82 FYGRIDYQDRAKRKNEKSLEVVWQGSRSLGSSAQIFAGAFPE-NYEP-----PPG----GFYFEVNDK---YPIIQDNI-  147 (864)
Q Consensus        82 ~~~R~~~~~k~~~~~~~~~eF~W~g~d~~~~gs~i~th~~~~-~Y~~-----p~~----~f~f~~~~~---~~~~~~~~-  147 (864)
                      +|+|++|++++.|+..+.+||+|+|+|+..+|++||||++|. +|+.     |+.    +|+|+.+..   .|||.++| 
T Consensus       225 ~~~R~~~~~~~~~~~~k~~eF~W~~~w~~~dGs~Ilt~~~p~~~Y~~~~~~gp~~~~c~~fdf~~l~~~~~~~~~~~~p~  304 (1045)
T 3bvx_A          225 LIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRMGSFGLSCPWKVPPR  304 (1045)
T ss_dssp             EECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTCEEEEECCSSCSSGGGTSSSCHHHHGGGCGGGSSTTSCCCTTSCCCC
T ss_pred             EEecccccccccccccCCceEEEeCCCCCCCCCeEEEEeccccccCcccccCCCccccccccccccccccccCcccCCcc
Confidence            999999999999998999999999776666699999999994 6753     322    466665433   46666555 


Q ss_pred             ccccCCHHHHHHHHHHHHHHhhhccCCCeEEEeecCCCCccchHHH---HHHHHHHHHHHhcCC--cEEEEEcCccchHH
Q 002938          148 KLFDYNVQDRVNDFVAAAISQANITRTNHIMWTMGTDFKYQYARTW---FRQLDKFIHYVNMDG--RVNALYSTPSIYTD  222 (864)
Q Consensus       148 ~~~~~nv~~~~~~~~~~~~~~~~~~~t~~il~~~G~Df~y~~a~~~---~~~~~~li~~iN~~~--~~~i~~sT~~~Yf~  222 (864)
                      .+++.|+++|++.+++++++++..|+++++|+|+|+||+|+++.+|   ++||+++|+++|+.+  .++++|||+++||+
T Consensus       305 ~~~~~nv~~r~~~~~~~~~~~~~~~~t~~~l~~~G~d~~~~~~~~~~~~~~n~~~li~~in~~~~~~~~v~~sT~~~yf~  384 (1045)
T 3bvx_A          305 TISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQFGTLQEYFD  384 (1045)
T ss_dssp             CCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHHHHHHHHHHHHHHHHHHCGGGCEEEEECCHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCCcchhhhHHHHHHHHHHHHHHhhCCCCCceEEECCHHHHHH
Confidence            5678899999999999999999999999999999999999998765   899999999999753  58999999999999


Q ss_pred             HHhhcC----CCCCcccCCCccccccCCCceeeeeechhhHHHHHHHHhHHHHHHHHHHHhhcc---CCCCCchHHHHHH
Q 002938          223 AKYASN----ESWPLKTDDFFPYADRAHAYWTGYFSSRPALKRYVKVMSGYYLAARQLEFYIGR---SETGHNTDSLADA  295 (864)
Q Consensus       223 a~~~~~----~~~p~~~gdf~~y~~~~~~yWtG~yTSr~~~K~~~R~~e~~L~~aE~l~~l~~~---~~~~~~~~~lw~~  295 (864)
                      ++++..    ..||++.|||++|+++.++||+|||||||++|+++|++|++|++||+|+++|..   .++...++++|++
T Consensus       385 ~l~~~~~~~~~~lp~~~Ge~~~~~~~~~~yw~G~yTSr~~~K~~nR~~e~~L~~aE~l~ala~~~~~~~~~~~L~~~wk~  464 (1045)
T 3bvx_A          385 AVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRAAEMLSAWHSWDGMARIEERLEQARRE  464 (1045)
T ss_dssp             HHHHHHHTTSCCCCEEESCBCSCEEETTEECCGGGTSSHHHHHHHHHHHHHHHHHHHHHHTSCCCGGGCHHHHHHHHHHH
T ss_pred             HHHhhcccccccCcccCCcccccccCCcccccceecccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHH
Confidence            998753    369999999999999999999999999999999999999999999999999864   3455678999999


Q ss_pred             HHHHcccccccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC---cccccccccccccCCCcccc
Q 002938          296 LAIAQHHDAVTGTEKQHVANDYAKRLAIGYTEAEEVVATALACLVDSPSDNGCGRST---TRFQQCPLLNISYCPASEID  372 (864)
Q Consensus       296 l~~~QhHDaItGTs~~~V~~dy~~rl~~~~~~~~~~~~~~l~~L~~~~~~~~~~~~~---~~~~~~~~ln~s~~~~~~~~  372 (864)
                      |+++||||+|||||+++|++||.+||.+|...++.++..+++.|+..... .+..+.   .++..|.+++.+.|+....-
T Consensus       465 lll~QhHD~i~Gts~~~V~~d~~~rl~~a~~~~~~l~~~al~~L~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  543 (1045)
T 3bvx_A          465 LSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLLTKPSI-YSPDFSFSYFTLDDSRWPGSGVEDSRTTI  543 (1045)
T ss_dssp             HHHHTBTTTTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCTTT-CCCCTTSCSEEEECSSSSCTTTCCCCCEE
T ss_pred             HhccccccCCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-ccccccccccchhhhcccccccccccccc
Confidence            99999999999999999999999999999999999999999999853211 111111   12334555666677653210


Q ss_pred             cCCCC---eEEEEEEcCCCceEEEEEEEEeeCCcEEEEccCCcEEeEEEcCCccccccchhhhhhhccCCCCCCCCcEEE
Q 002938          373 FSNGK---NLVIVIYNSLGWKREDIIRIPVANGDVTVFNSEGKIIESQLVPPADAFMDLRDYYVRAYLGRNPMVPPKYWL  449 (864)
Q Consensus       373 ~~~~~---~~~v~v~Npl~~~r~~~v~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  449 (864)
                      ...++   ...|+|||||+|+|+++|+|+|..+.+.|+|.+|++|++|+++.+.....+....+     ........|+|
T Consensus       544 ~~~~~~~~~~~vvvfN~L~~~r~~~V~v~v~~~~~~V~D~~G~~v~~Qi~~~~~~~~~~~~~~~-----~~~~~~~~~~L  618 (1045)
T 3bvx_A          544 ILGEDILPSKHVVMHNTLPHWREQLVDFYVSSPFVSVTDLANNPVEAQVSPVWSWHHDTLTKTI-----HPQGSTTKYRI  618 (1045)
T ss_dssp             CCBTTTBSEEEEEEEECSSSCEEEEEEEEESCSCEEEEETTCCEECEEEEEEEEEEEETTTTEE-----EEEEEEEEEEE
T ss_pred             cccccccCCceEEEEcCCCcceeeEEEEEeccCceEEEcCCCCEEeEEEeeccccccccccccc-----cccCCCCcEEE
Confidence            00122   56899999999999999999999999999999999999999987643221100000     00001235789


Q ss_pred             EEEeecCCCceEEEEEEecCCCCCccccccc----------eec-ccCCCCceEEecceE------EEEEeCCCCCeEEE
Q 002938          450 AFPVSVPPLGFSTYTISSVKRGGGHSIRSSI----------QTF-ESSDKSTVEVGQGNL------KLIFSSDKSKPINY  512 (864)
Q Consensus       450 ~f~~~vPplG~~~y~i~~~~~~~~~~~~s~~----------~~~-~~~~~~~~~ieN~~~------~v~~~~~~G~l~si  512 (864)
                      +|.++||||||++|.|............+.+          ... .....+...|||++|      +|+|++ +|.|++|
T Consensus       619 ~f~a~vP~lG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~leN~~~~~~~~~~v~fd~-~G~L~si  697 (1045)
T 3bvx_A          619 IFKARVPPMGLATYVLTISDSKPEHTSYASNLLLRKNPTSLPLGQYPEDVKFGDPREISLRVGNGPTLAFSE-QGLLKSI  697 (1045)
T ss_dssp             EEEEEECTTEEEEEEEEECSSCCTTEEECEEEEECSSCCCCCCTTCSSCCEEECCCCEEEECTTSCEEEECT-TSCEEEE
T ss_pred             EEEeccCCceeEEEEEEecCCccccccccceeecccccccccccccccCCCceeecccccccccccEEEECC-CCcEEEE
Confidence            9999999999999999876543220000001          000 001334578999999      999995 9999999


Q ss_pred             EecCCceEEEEEEeEEEecccCCCCCCCCCCCcceEEccCCCc-eeccCCcccEEEEEcCceEEEEEEEcceEEEEEEEe
Q 002938          513 INNKSLVEESVEQSYSFYPAYNGTNDKAPQNAGAYIFRPNGTF-FIKSEGQVPLTVMRGPILDEVHQKINEWIYQVTRLY  591 (864)
Q Consensus       513 ~~k~~g~~~~~~~~~~~Y~~~~g~~~~~~~~sgaY~F~P~~~~-~~~~~~~~~i~v~~G~l~~~v~~~~~~~i~~~vrL~  591 (864)
                      +||++|+++.+.++|.+|.+..+     ++.||||+|+|++.+ ++.. ....++|++|||+++|++.+ ++++|++|| 
T Consensus       698 ~dk~~g~e~~~~~~f~~Y~~~~~-----~~~sgaY~F~P~~~~~~~~~-~~~~~~v~~Gpl~~ev~~~~-~~i~q~irL-  769 (1045)
T 3bvx_A          698 QLTQDSPHVPVHFKFLKYGVRSH-----GDRSGAYLFLPNGPASPVEL-GQPVVLVTKGKLESSVSVGL-PSVVHQTIM-  769 (1045)
T ss_dssp             ECSTTSCCEEEEEEEEEECBCSS-----SCCCCSSCCCBSSSCEECCC-CSCCEEEEECSSCEEEEEEE-TTEEEEEEE-
T ss_pred             EEcCCCeEEEEeeEEEEEecccC-----CCCCcceEecCCCCCccccc-CCceEEEEeCCeEEEEEEEE-eeEEEEEEE-
Confidence            99999999999999999987654     678999999999876 4333 35678899999999999999 589999999 


Q ss_pred             cCCCeEEEEEEEccccccCCCCcEEEEEEEeecCCCCeEEEcCcccceeecccccCCCCcccCCCccccceeecCceEeE
Q 002938          592 KGKEHVEVEFIVGPIPVDDGLGKEVVTHITSTLETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNEPVAGNYYPINLGIYM  671 (864)
Q Consensus       592 ~~~~~ie~e~~v~~i~~~~~~~~e~~~~f~t~i~s~~~fytDsnG~~~ikR~~~~~~~w~~~~~~pv~~nyYP~~s~~~i  671 (864)
                       ++++|||++.|+   |.+..|||++++|+|+|+++..||||+|||++|+|+++.        .+|+++|||||+++|+|
T Consensus       770 -~~~~ieie~~Vd---~~~~~~~el~~rf~t~i~s~~~fyTD~nG~~~ikR~~~~--------~~p~~~NyYPv~s~~~i  837 (1045)
T 3bvx_A          770 -RGGAPEIRNLVD---IGSLDNTEIVMRLETHIDSGDIFYTDLNGLQFIKRRRLD--------KLPLQANYYPIPSGMFI  837 (1045)
T ss_dssp             -SSSSCEEEEEEC---CTTCTTEEEEEEEEECCCCTTEEEEEETTTEEEEEECCT--------TSCGGGGCEEESSEEEE
T ss_pred             -CCeeEEEEEEEe---cCCCCCeEEEEEeecccCCCCeEEEecCCceeEEcCCCC--------CCCcccceEEeeeeEEE
Confidence             888999999994   554569999999999999999999999999999999874        37899999999999999


Q ss_pred             EeCCceeEEEecCCcccccccCceEEEEEEeeccccCCcccccccccccccccccCCeEEEeEEEEEeecCCCccc----
Q 002938          672 QDVKKEFSLLVDRALGGSSIVDGEVELMLHRRLLLDDSRGVAEALNETDCVLDECKGLTIQGKYYFRIDTIGDGAK----  747 (864)
Q Consensus       672 ~D~~~~ltvl~dr~~G~sS~~~G~iElml~Rr~~~dD~rGvge~l~e~~~~~~~~~g~~~~~~~~l~l~~~~~~~~----  747 (864)
                      +|++.|||||+||+|||||+++|+||||||||+++||+|||||+|+|+         ++++++|||+|++...++.    
T Consensus       838 ~D~~~~ltvl~drs~G~sSl~~G~lElmlhRrl~~DD~rGvge~l~d~---------~~~~~~~~l~l~~~~~~~~~~~~  908 (1045)
T 3bvx_A          838 EDANTRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLGQGVLDN---------KPVLHIYRLVLEKVNNCVRPSKL  908 (1045)
T ss_dssp             ECSSEEEEEEESSCEEEECCSTTEEEEEEEEEBCSCCSSSCCSCBCCC---------CCEEEEEEEEEEECTTSCCCCTT
T ss_pred             EcCCeeEEEEecCCccccccCCCeEEEEEeeeeccCCcccccccccCC---------ceeeeEEEEEEeccccccccccc
Confidence            999999999999999999999999999999999999999999999986         4589999999998765431    


Q ss_pred             --------ccccchhhhcCCceeeeeccCCCcccCCcccccccCCCCCCCCCceeEEEeEeeCCCc-----EEEEEeec-
Q 002938          748 --------WRRTFGQEIYSPPLLAFTEEDGDSWRNSHVTTFSGIDSSYSLPDNVAIITLQELDDGK-----ILLRLAHL-  813 (864)
Q Consensus       748 --------~~r~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~s~l~~~~~lp~nvhlltl~~~~~~~-----~llR~~~l-  813 (864)
                              ..|..++++++||+++++....  +. ....+|+++..  +|||||||+|||+++++.     +||||+++ 
T Consensus       909 ~~~~~~s~~~~~~~~~l~~p~~~~~~~~~~--~~-~~~~~~~~l~~--~lP~~vhlltL~~~~~~~~~~~~~ll~L~~~~  983 (1045)
T 3bvx_A          909 HPAGYLTSAAHKASQSLLDPLDKFIFAENE--WI-GAQGQFGGDHP--SAREDLDVSVMRRLTKSSAKTQRVGYVLHRTN  983 (1045)
T ss_dssp             CSEECCCHHHHHHHHHHHSCCEEEEECSSC--CT-TBCSEECTTSC--CCCTTEEEEEEEECSCTTCSEEEEEEEEEECC
T ss_pred             ccccccCHHHHHHHHHHhCCcceeeccCcc--cc-cccccCCcccc--cCCCCEEEEEeEecCCCCccCceEEEEEeeec
Confidence                    2356788999999999886322  22 24567888764  899999999999999887     99999433 


Q ss_pred             ccccCCCCCCcceeeeccccCCCCCcceEEEcccccccccchh
Q 002938          814 YQLGEDNDLSKPTNVELKKLFPRKKIGKVTETSLSANQERTEM  856 (864)
Q Consensus       814 ~~~~~~~~~s~~~~v~l~~lf~~~~~~~~~etsLtg~~~~~~~  856 (864)
                      |+++++.. +++++|||.+||..  |.+++||||||++.++++
T Consensus       984 ~~~~~~~~-s~~~~~~l~~lf~~--i~~~~etsL~~~~~~~~~ 1023 (1045)
T 3bvx_A          984 LMQCGTPE-EHTQKLDVCHLLPN--VARCERTTLTFLQNLEHL 1023 (1045)
T ss_dssp             CCCCSCCC-CCCCCCCGGGSSSS--EEEEEEECTTSCSEEEEC
T ss_pred             cccCcCcc-cCcccccHHHHhcC--cceEEEecccCCcccccc
Confidence            89988876 88999999999998  999999999999998765
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A* Back     alignment and structure
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis} Back     alignment and structure
>1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Back     alignment and structure
>1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1 Back     alignment and structure
>1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6 Back     alignment and structure
>1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1 Back     alignment and structure
>1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Back     alignment and structure
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A* Back     alignment and structure
>3p0b_A TT1467 protein; glycoside hydrolase GH57, glycogen branching, transferase; 1.35A {Thermus thermophilus} PDB: 1ufa_A Back     alignment and structure
>2b5d_X Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2.20A {Thermotoga maritima} SCOP: a.8.3.3 c.6.2.4 Back     alignment and structure
>3n98_A Alpha-amylase, GH57 family; GH57 family member, branching enzyme, transferase; HET: BGC PG4; 1.87A {Thermococcus kodakarensis} PDB: 3n92_A* 3n8t_A* Back     alignment and structure
>3rxz_A Polysaccharide deacetylase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, carbohydrate esterase family 4; 2.01A {Mycobacterium smegmatis} Back     alignment and structure
>3cl6_A PUUE allantoinase; URIC acid, nitrogen fixation, hydrolase; 1.58A {Pseudomonas fluorescens} PDB: 3cl7_A 3cl8_A 1z7a_A Back     alignment and structure
>3s6o_A Polysaccharide deacetylase family protein; ssgcid, NIH, structural genomics, seattle structural genomic for infectious disease; 1.85A {Burkholderia pseudomallei} SCOP: c.6.2.6 Back     alignment and structure
>3qbu_A Putative uncharacterized protein; metallo enzyme, peptidoglycan, TIM barrel, deacetylase, HYDR; 2.57A {Helicobacter pylori} Back     alignment and structure
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3 Back     alignment and structure
>2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans} Back     alignment and structure
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 864
g1o7d.2490 b.30.5.6 (C:488-585,D:603-875,E:885-1007) Lysosoma 1e-132
d3bvua2522 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II { 1e-122
d3bvua3381 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fru 2e-75
g1o7d.3330 c.6.2.1 (A:51-342,B:347-384) Lysosomal alpha-manno 1e-71
g1o7d.195 a.8.3.1 (B:385-422,C:431-487) Lysosomal alpha-mann 6e-26
d3bvua1111 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fr 7e-25
d1k1xa3310 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-te 3e-24
>d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 522 Back     information, alignment and structure
>d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 381 Back     information, alignment and structure
>d3bvua1 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 111 Back     information, alignment and structure
>d1k1xa3 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} Length = 310 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query864
g1o7d.2490 Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax 100.0
d3bvua2522 Golgi alpha-mannosidase II {Fruit fly (Drosophila 100.0
d3bvua3381 Golgi alpha-mannosidase II {Fruit fly (Drosophila 100.0
g1o7d.3330 Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax 100.0
d3bvua1111 Golgi alpha-mannosidase II {Fruit fly (Drosophila 99.95
g1o7d.195 Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax 99.94
d1k1xa3310 4-alpha-glucanotransferase, N-terminal domain {Arc 99.82
d2b5dx2404 Alpha-amylase AmyC {Thermotoga maritima [TaxId: 23 97.27
d1ufaa2412 Hypothetical protein TT1467, N-terminal domain {Th 96.59
d1z7aa1301 Hypothetical protein PA1517 {Pseudomonas aeruginos 93.55
d2j13a1235 Putative polysaccharide deacetylase BA0424 {Bacill 87.94
d2c1ia1196 Peptidoglycan GlcNAc deacetylase C-terminal domain 87.44
d1ny1a_235 Probable polysaccharide deacetylase PdaA {Bacillus 80.88
d2cc0a1192 Acetyl-xylan esterase {Streptomyces lividans [TaxI 80.49
>d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d3bvua1 a.8.3.1 (A:412-522) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1k1xa3 c.6.2.2 (A:1-310) 4-alpha-glucanotransferase, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} Back     information, alignment and structure
>d2b5dx2 c.6.2.4 (X:1-404) Alpha-amylase AmyC {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ufaa2 c.6.2.4 (A:1-412) Hypothetical protein TT1467, N-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1z7aa1 c.6.2.6 (A:4-304) Hypothetical protein PA1517 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2j13a1 c.6.2.3 (A:1-235) Putative polysaccharide deacetylase BA0424 {Bacillus anthracis [TaxId: 1392]} Back     information, alignment and structure
>d2c1ia1 c.6.2.3 (A:268-463) Peptidoglycan GlcNAc deacetylase C-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1ny1a_ c.6.2.3 (A:) Probable polysaccharide deacetylase PdaA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2cc0a1 c.6.2.3 (A:1-192) Acetyl-xylan esterase {Streptomyces lividans [TaxId: 1916]} Back     information, alignment and structure