Citrus Sinensis ID: 002973

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-
MKNFVFKVLVLFLSCWVALCKECTNSFPQLASHTFRYELLSSKNETWKKEVYSHYHLTPTDDSAWSNLLPRKMLSETDEFSWTMIYRKMKNPDGFKLAGDFLKEVSLHDVKLDPSSLHWRAQQTNLEYLLMLDVDSLVWSFQKTAGSPTAGKAYEGWEDPTCELRGHFVGHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTFADNTQALKMTKWMVEYFYNRVQNVITKYSVERHWNSLNEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDISGFHANTHIPVVIGSQMRYEVTGDPLYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVYADYYERALTNGVLSIQRGTEPGVMIYMLPLGRGDSKAKSYHGWGTRFSSFWCCYGTGIESFSKLGDSIYFEEEGNVPGLYIIQYISSSLDWKSGNIVLNQKVDPVVSWDPYLRMTHTFSSKQEASQSSSLNLRIPLWTNSNGAKATLNGQSLSLPAPGNFISVTQRWSSTDKLTIQLPINLRTEAIKDDRPAYASIQAILYGPYLLAGHTSGDWDIKTGSAKSLSDWITPIPASYNGQLVTFAQESGDSAFVLSNSNQSITMEKFPESGTDAALHATFRLIMKEESSSEVSSLKDVIGKSVMLEPFDFPGMLVVQQGTDGELVVSDSPKEGDSSVFRLVAGLDGKDETISLEAVNQNGCFVYSGVNFNSGASLKLSCSTESSEDGFNEAVSFVMEKGISEYHPISFVAKGARRNFLLAPLLSFRDETYTVYFNIQD
cccHHHHHHHHHHHHHcccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccEEEcccccHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccEEcccccccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHcccccccccccccccccccccHHcHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccccccccEEEEccccccccccccccccccccccccccccccccHHHHcccEEEEEEcccccEEEEEEccccEEEEEEccEEEEEEEcccccccccEEEEEEEEEEcccccEEEEEEEcccccccccEEEEEccEEEccccccccEEEEEEcccccEEEEEEEcEEEEEEccccccccccEEEEEEccEEEEccccccccccccccccccccccccccccccccEEEEEccccccEEEEccccccEEccccccccccEEEEEEEEEEccccccccccccccccccccccccccccEEEEEEcccccEEEccccccccccEEEEEcccccccccEEEEccccccEEEEEcccccccccEEEEEccccccccccccccccccccccccccccEEEEcccccEEEccccccccccEEEEEEEcc
cHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHccccccHHHHHHHccccccccHHHHHHcccHHHHccHHHHHHHHHHHHccccccccccccccccccHHHEEEccccHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccEEccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccHHHHHHHHHHHHccHHHHHHHHHcccHHHHcHHHHcccccccccccccccHEEEHHHHHHHcccHHHHHHHHHHHHHHHcccEEEEcccccccccccHHHHHHHHccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccEEEEEEcccccccccccccccccccccEEEccccccccccccccEEEEEcccccccEEEEEEEccEEEcccccEEEEEEEcccccccEEEEEEEEEEEccccccEEEEEEEcccHHcccccEEEEccEEEcccccccEEEEEEEcccccEEEEEEcccEEEEEccccccccccEEEEEEccEEEEEcccccccccccccccccccccccccccccccEEEccccccccEEEEccccEEEEEEcccccccccEEEEEEEEcccccccccccccHccccEEEEEccccccEEEEEccccccEEEEcccccccccEEEEEccccccccEEEEEEcccccEEEEEccccccccEEEEEEccccccHHHHHHHHHHHcccccccccEEEEEccccccccHccHHccccccEEEEEEccc
MKNFVFKVLVLFLSCWVALCKEctnsfpqlasHTFRYELLSSKNETWKKEVYshyhltptddsawsnllprkmlsetdeFSWTMIYRKmknpdgfklAGDFLKevslhdvkldpsslhWRAQQTNLEYLLMLDVDSLVWSFqktagsptagkayegwedptcelrghfvGHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNkmgsgylsafpseqfdrfealkpvwapyyTIHKILAGLLDQYTFADNTQALKMTKWMVEYFYNRVQNVITKYSVERHWnslneetggmnDVLYRLYTITQDPKHLLLAhlfdkpcfLGLLAvqaddisgfhanthipvvigsqmryevtgdplykvtGTFFMDIVNashgyatggtsagefwsdpkrlastlgteneescttYNMLKVSRHLFRWTKEMVYADYYERALTNgvlsiqrgtepgvmiymlplgrgdskaksyhgwgtrfssfwccygtgiesfsklgdsiyfeeegnvpgLYIIQYISSsldwksgnivlnqkvdpvvswdpylrmthtfsskqeasqssslnlriplwtnsngakatlngqslslpapgnfisvtqrwsstdkltiqlpinlrteaikddrpayASIQAILYgpyllaghtsgdwdiktgsakslsdwitpipasyngqlVTFAQESgdsafvlsnsnqsitmekfpesgtdaALHATFRLIMKEESSSEVSSLKDVigksvmlepfdfpgmlvvqqgtdgelvvsdspkegdssVFRLVAgldgkdetiSLEAvnqngcfvysgvnfnsgaslklscstessedgFNEAVSFVMEKgiseyhpisfvAKGARRNFllapllsfrdetYTVYFNIQD
MKNFVFKVLVLFLSCWVALCKECTNSFPQLASHTFRYELLSSKNETWKKEVYSHYHltptddsawsnllPRKMLSETDEFSWTMIYRKMKNPDGFKLAGDFLKEVSLHDVKLDPSSLHWRAQQTNLEYLLMLDVDSLVWSFQKTAGSPTAGKAYEGWEDPTCELRGHFVGHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTFADNTQALKMTKWMVEYFYNRVQNVITKYSVERHWNSLNEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDISGFHANTHIPVVIGSQMRYEVTGDPLYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTlgteneescttynmlkvSRHLFRWTKEMVYADYYERALTNGVLSIQRGTEPGVMIYMLPLGRGDSKAKSYHGWGTRFSSFWCCYGTGIESFSKLGDSIYFEEEGNVPGLYIIQYISSSLDWKSGNIVLNQKVDPVVSWDPYLRMTHTfsskqeasqsSSLNLRIPLWTNSNGAKATLNGQSLSLPAPGNFISVTQRWSSTDKLTIQLPINLRTEAIKDDRPAYASIQAILYGPYLLAGHTSGDWDIKTGSAKSLSDWITPIPASYNGQLVTFAQESGDSAFVLSNSNQSITMEKFPESGTDAALHATFRLIMKEESSSEVSSLKDVIGKSVMLEPFDFPGMLVVQQGTDGELVvsdspkegdsSVFRLVAGLDGKDETISLEAVNQNGCFVYSGVNFNSGASLKLSCSTESSEDGFNEAVSFVMEKGISEYHPISFVAKGARRNFLLApllsfrdetyTVYFNIQD
MKNFVFKVLVLFLSCWVALCKECTNSFPQLASHTFRYELLSSKNETWKKEVYSHYHLTPTDDSAWSNLLPRKMLSETDEFSWTMIYRKMKNPDGFKLAGDFLKEVSLHDVKLDPSSLHWRAQQTNLEYLLMLDVDSLVWSFQKTAGSPTAGKAYEGWEDPTCELRGHFVGHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTFADNTQALKMTKWMVEYFYNRVQNVITKYSVERHWNSLNEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDISGFHANTHIPVVIGSQMRYEVTGDPLYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVYADYYERALTNGVLSIQRGTEPGVMIYMLPLGRGDSKAKSYHGWGTRFSSFWCCYGTGIESFSKLGDSIYFEEEGNVPGLYIIQYISSSLDWKSGNIVLNQKVDPVVSWDPYLRMTHTFsskqeasqsssLNLRIPLWTNSNGAKATLNGQSLSLPAPGNFISVTQRWSSTDKLTIQLPINLRTEAIKDDRPAYASIQAILYGPYLLAGHTSGDWDIKTGSAKSLSDWITPIPASYNGQLVTFAQESGDSAFVLSNSNQSITMEKFPESGTDAALHATFRLIMKeesssevssLKDVIGKSVMLEPFDFPGMLVVQQGTDGELVVSDSPKEGDSSVFRLVAGLDGKDETISLEAVNQNGCFVYSGVNFNSGASLKLSCSTESSEDGFNEAVSFVMEKGISEYHPISFVAKGARRNFLLAPLLSFRDETYTVYFNIQD
***FVFKVLVLFLSCWVALCKECTNSFPQLASHTFRYELLSSKNETWKKEVYSHYHLTPTDDSAWSNLLPRKMLSETDEFSWTMIYRKMKNPDGFKLAGDFLKEVSLHDVKLDPSSLHWRAQQTNLEYLLMLDVDSLVWSFQKTAGSPTAGKAYEGWEDPTCELRGHFVGHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTFADNTQALKMTKWMVEYFYNRVQNVITKYSVERHWNSLNEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDISGFHANTHIPVVIGSQMRYEVTGDPLYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGT*NEESCTTYNMLKVSRHLFRWTKEMVYADYYERALTNGVLSIQRGTEPGVMIYMLPLGRGDSKAKSYHGWGTRFSSFWCCYGTGIESFSKLGDSIYFEEEGNVPGLYIIQYISSSLDWKSGNIVLNQKVDPVVSWDPYLRMTHT**************LRIPLWTN**************LPAPGNFISVTQRWSSTDKLTIQLPINLRTEAIKDDRPAYASIQAILYGPYLLAGHTSGDWDIKTGSAKSLSDWITPIPASYNGQLVTFAQ*****************************LHATFRLI*************DVIGKSVMLEPFDFPGMLVVQQGTDGEL************VFRLVAGLDGKDETISLEAVNQNGCFVYSGVNFNSGASLKLSC********FNEAVSFVMEKGISEYHPISFVAKGARRNFLLAPLLSFRDETYTVYFNI**
***FVFKVLVLFLSCWVALCKECTNSFPQLASHTFRY**************YSHYHLTPTDDSAWSNLLPRKMLSETDEFSWTMIY***************LKEVSLHDVKLDPSSLHWRAQQTNLEYLLMLDVDSLVWSFQKTAGSPTAGKAYEGWEDPTCELRGHFVGHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTFADNTQALKMTKWMVEYFYNRVQNVITKYSVERHWNSLNEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDISGFHANTHIPVVIGSQMRYEVTGDPLYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVYADYYERALTNGVLSIQRGTEPGVMIYMLPLGRGDSKAKSYHGWGTRFSSFWCCYGTGIESFSKLGDSIYFEEEGNVPGLYIIQYISSSLDWKSGNIVLNQKVDPVVSWDPYLRMTHTFSSKQEASQSSSLNLRIPLWTNSNGAKATLNGQSLSLPAPGNFISVTQRWSSTDKLTIQLPINLRTEAIKDDRPAYASIQAILYGPYLLAGHTSGDWDIKTGSAKSLSDWITPIPASYNGQLVTFAQESGDSAFVLSNSNQSITMEKFPESGTDAALHATFRLIMKEESSSE***********VMLEPFDFPGMLVVQQGTDGELVVSDSPKEGDSSVFRLVAGLDGKDETISLEAVNQNGCFVYSGVNFNSGASLKLSCSTES*EDGFNEAVSFVMEKGISEYHPISFVAKGARRNFLLAPLLSFRDETYTVYFNIQ*
MKNFVFKVLVLFLSCWVALCKECTNSFPQLASHTFRYELLSSKNETWKKEVYSHYHLTPTDDSAWSNLLPRKMLSETDEFSWTMIYRKMKNPDGFKLAGDFLKEVSLHDVKLDPSSLHWRAQQTNLEYLLMLDVDSLVWSFQKTAGSPTAGKAYEGWEDPTCELRGHFVGHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTFADNTQALKMTKWMVEYFYNRVQNVITKYSVERHWNSLNEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDISGFHANTHIPVVIGSQMRYEVTGDPLYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVYADYYERALTNGVLSIQRGTEPGVMIYMLPLGRGDSKAKSYHGWGTRFSSFWCCYGTGIESFSKLGDSIYFEEEGNVPGLYIIQYISSSLDWKSGNIVLNQKVDPVVSWDPYLRMTHT************LNLRIPLWTNSNGAKATLNGQSLSLPAPGNFISVTQRWSSTDKLTIQLPINLRTEAIKDDRPAYASIQAILYGPYLLAGHTSGDWDIKTGSAKSLSDWITPIPASYNGQLVTFAQESGDSAFVLSNSNQSITMEKFPESGTDAALHATFRLIMKE*********KDVIGKSVMLEPFDFPGMLVVQQGTDGELVVSDSPKEGDSSVFRLVAGLDGKDETISLEAVNQNGCFVYSGVNFNSGASLK**********GFNEAVSFVMEKGISEYHPISFVAKGARRNFLLAPLLSFRDETYTVYFNIQD
*KNFVFKVLVLFLSCWVALCKECTNSFPQLASHTFRYELLSSKNETWKKEVYSHYHLTPTDDSAWSNLLPRKMLSETDEFSWTMIYRKMKNPD****AGDFLKEVSLHDVKLDPSSLHWRAQQTNLEYLLMLDVDSLVWSFQKTAGSPTAGKAYEGWEDPTCELRGHFVGHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTFADNTQALKMTKWMVEYFYNRVQNVITKYSVERHWNSLNEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDISGFHANTHIPVVIGSQMRYEVTGDPLYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVYADYYERALTNGVLSIQRGTEPGVMIYMLPLGRGDSKAKSYHGWGTRFSSFWCCYGTGIESFSKLGDSIYFEEEGNVPGLYIIQYISSSLDWKSGNIVLNQKVDPVVSWDPYLRMTHTFSSKQEASQSSSLNLRIPLWTNSNGAKATLNGQSLSLPAPGNFISVTQRWSSTDKLTIQLPINLRTEAIKDDRPAYASIQAILYGPYLLAGHTSGDWDIKTGSAKSLSDWITPIPASYNGQLVTFAQESGDSAFVLSNSNQSITMEKFPESGTDAALHATFRLIMKEESSSEVSSLKDVIGKSVMLEPFDFPGMLVVQQGTDGELVVSDSPKEGDSSVFRLVAGLDGKDETISLEAVNQNGCFVYSGVNFNSGASLKLSCSTESSEDGFNEAVSFVMEKGISEYHPISFVAKGARRNFLLAPLLSFRDETYTVYFNIQD
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKNFVFKVLVLFLSCWVALCKECTNSFPQLASHTFRYELLSSKNETWKKEVYSHYHLTPTDDSAWSNLLPRKMLSETDEFSWTMIYRKMKNPDGFKLAGDFLKEVSLHDVKLDPSSLHWRAQQTNLEYLLMLDVDSLVWSFQKTAGSPTAGKAYEGWEDPTCELRGHFVGHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTFADNTQALKMTKWMVEYFYNRVQNVITKYSVERHWNSLNEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDISGFHANTHIPVVIGSQMRYEVTGDPLYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVYADYYERALTNGVLSIQRGTEPGVMIYMLPLGRGDSKAKSYHGWGTRFSSFWCCYGTGIESFSKLGDSIYFEEEGNVPGLYIIQYISSSLDWKSGNIVLNQKVDPVVSWDPYLRMTHTFSSKQEASQSSSLNLRIPLWTNSNGAKATLNGQSLSLPAPGNFISVTQRWSSTDKLTIQLPINLRTEAIKDDRPAYASIQAILYGPYLLAGHTSGDWDIKTGSAKSLSDWITPIPASYNGQLVTFAQESGDSAFVLSNSNQSITMEKFPESGTDAALHATFRLIMKEESSSEVSSLKDVIGKSVMLEPFDFPGMLVVQQGTDGELVVSDSPKEGDSSVFRLVAGLDGKDETISLEAVNQNGCFVYSGVNFNSGASLKLSCSTESSEDGFNEAVSFVMEKGISEYHPISFVAKGARRNFLLAPLLSFRDETYTVYFNIQD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query861
224053368858 predicted protein [Populus trichocarpa] 0.995 0.998 0.756 0.0
225435510864 PREDICTED: uncharacterized protein LOC10 0.996 0.993 0.761 0.0
224075776858 predicted protein [Populus trichocarpa] 0.993 0.996 0.761 0.0
449448754868 PREDICTED: uncharacterized protein LOC10 0.981 0.973 0.724 0.0
359478753874 PREDICTED: uncharacterized protein LOC10 0.980 0.965 0.720 0.0
356541181854 PREDICTED: uncharacterized protein LOC10 0.989 0.997 0.695 0.0
356541912854 PREDICTED: uncharacterized protein LOC10 0.989 0.997 0.691 0.0
15239944861 uncharacterized protein [Arabidopsis tha 0.982 0.982 0.664 0.0
297746357767 unnamed protein product [Vitis vinifera] 0.839 0.942 0.787 0.0
297807309860 hypothetical protein ARALYDRAFT_350453 [ 0.986 0.987 0.660 0.0
>gi|224053368|ref|XP_002297785.1| predicted protein [Populus trichocarpa] gi|222845043|gb|EEE82590.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1385 bits (3585), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 651/860 (75%), Positives = 748/860 (86%), Gaps = 3/860 (0%)

Query: 1   MKNFVFKVLVLFLSCWVALCKECTNSFPQLASHTFRYELLSSKNETWKKEVYSHYHLTPT 60
           MK  +  ++VL + C     KECTN+  QL+SHTFRY LLSS+NETWK+E+++HYHLTPT
Sbjct: 1   MKGLIV-LVVLSMLCGFGTSKECTNTPTQLSSHTFRYALLSSENETWKEEMFAHYHLTPT 59

Query: 61  DDSAWSNLLPRKMLSETDEFSWTMIYRKMKNPDGFKLAGDFLKEVSLHDVKLDPSSLHWR 120
           DDSAW+NLLPRK+L E DE+SW M+YR +K+P   K +G+FLKEVSLH+V+LDPSS+HW+
Sbjct: 60  DDSAWANLLPRKILREEDEYSWAMMYRNLKSP--LKSSGNFLKEVSLHNVRLDPSSIHWQ 117

Query: 121 AQQTNLEYLLMLDVDSLVWSFQKTAGSPTAGKAYEGWEDPTCELRGHFVGHYLSASAHMW 180
           AQQTNLEYLLMLDVDSLVWSF+KTAG  T G AY GWE P CELRGHFVGHYLSASA MW
Sbjct: 118 AQQTNLEYLLMLDVDSLVWSFRKTAGLSTPGTAYGGWEAPNCELRGHFVGHYLSASAQMW 177

Query: 181 ASTHNVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILA 240
           ASTHN  L+++M+AVVSALS CQ KMGSGYLSAFPSE FDRFEA+KPVWAPYYTIHKILA
Sbjct: 178 ASTHNDILEKQMSAVVSALSSCQEKMGSGYLSAFPSELFDRFEAIKPVWAPYYTIHKILA 237

Query: 241 GLLDQYTFADNTQALKMTKWMVEYFYNRVQNVITKYSVERHWNSLNEETGGMNDVLYRLY 300
           GLLDQYTFADN QALKM KWMV+YFYNRV+NVIT +SVERH+ SLNEETGGMNDVLY+L+
Sbjct: 238 GLLDQYTFADNAQALKMVKWMVDYFYNRVRNVITNFSVERHYQSLNEETGGMNDVLYKLF 297

Query: 301 TITQDPKHLLLAHLFDKPCFLGLLAVQADDISGFHANTHIPVVIGSQMRYEVTGDPLYKV 360
           +IT DPKHL+LAHLFDKPCFLGLLAVQA+DISGFHANTHIP+VIG+QMRYE+TGDPLYK 
Sbjct: 298 SITGDPKHLVLAHLFDKPCFLGLLAVQAEDISGFHANTHIPIVIGAQMRYEITGDPLYKD 357

Query: 361 TGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWT 420
            GTFFMDIVN+SH YATGGTS  EFWSDPKRLASTL TENEESCTTYNMLKVSRHLFRWT
Sbjct: 358 IGTFFMDIVNSSHSYATGGTSVSEFWSDPKRLASTLQTENEESCTTYNMLKVSRHLFRWT 417

Query: 421 KEMVYADYYERALTNGVLSIQRGTEPGVMIYMLPLGRGDSKAKSYHGWGTRFSSFWCCYG 480
           KEM YADYYERALTNGVL IQRGTEPGVMIYMLP   G SK KSYHGWGT + +FWCCYG
Sbjct: 418 KEMAYADYYERALTNGVLGIQRGTEPGVMIYMLPQHPGSSKGKSYHGWGTLYDTFWCCYG 477

Query: 481 TGIESFSKLGDSIYFEEEGNVPGLYIIQYISSSLDWKSGNIVLNQKVDPVVSWDPYLRMT 540
           TGIESFSKLGDSIYFEEEG  PGLYIIQYISSSLDWKSG I++NQKVDPVVS DPYLR+T
Sbjct: 478 TGIESFSKLGDSIYFEEEGEAPGLYIIQYISSSLDWKSGQIMINQKVDPVVSSDPYLRVT 537

Query: 541 HTFSSKQEASQSSSLNLRIPLWTNSNGAKATLNGQSLSLPAPGNFISVTQRWSSTDKLTI 600
            TFS  + +SQ+S+LNLRIP+WT+ +GA AT+N QSL++PAPG+F+SV ++WSS DKL++
Sbjct: 538 FTFSPNKGSSQASTLNLRIPVWTHLDGATATINSQSLAIPAPGSFLSVNRKWSSGDKLSL 597

Query: 601 QLPINLRTEAIKDDRPAYASIQAILYGPYLLAGHTSGDWDIKTGSAKSLSDWITPIPASY 660
           QLPI+LRTEAI+DDR  YASIQAILYGPYLLAGHTSGDW++K GSA SLSD ITPIPASY
Sbjct: 598 QLPISLRTEAIQDDRHQYASIQAILYGPYLLAGHTSGDWNLKAGSAGSLSDSITPIPASY 657

Query: 661 NGQLVTFAQESGDSAFVLSNSNQSITMEKFPESGTDAALHATFRLIMKEESSSEVSSLKD 720
           N QLV+F+Q+SG+S FVL+NSNQSITME+ P+SGTDA L ATFR++  + SSSEV  + D
Sbjct: 658 NEQLVSFSQDSGNSTFVLTNSNQSITMEEHPKSGTDACLQATFRIVFNDSSSSEVLGIND 717

Query: 721 VIGKSVMLEPFDFPGMLVVQQGTDGELVVSDSPKEGDSSVFRLVAGLDGKDETISLEAVN 780
           VI KSVMLEPFD PGML+VQQG D  L V++S  +  SS+F +V GLDGKD T+SLE+ +
Sbjct: 718 VIDKSVMLEPFDLPGMLLVQQGKDSSLAVTNSAADDGSSIFHVVLGLDGKDGTVSLESGS 777

Query: 781 QNGCFVYSGVNFNSGASLKLSCSTESSEDGFNEAVSFVMEKGISEYHPISFVAKGARRNF 840
           Q GC++YSGVN+ SG S+KLSC   SS+ GFN+  SFVM KG+SEYHPISFVA+G +RNF
Sbjct: 778 QEGCYIYSGVNYKSGQSMKLSCKLGSSDPGFNQGASFVMNKGLSEYHPISFVAEGDKRNF 837

Query: 841 LLAPLLSFRDETYTVYFNIQ 860
           LLAPL S RDE YT+YFNIQ
Sbjct: 838 LLAPLHSLRDEFYTIYFNIQ 857

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225435510|ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246702 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224075776|ref|XP_002304762.1| predicted protein [Populus trichocarpa] gi|222842194|gb|EEE79741.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449448754|ref|XP_004142130.1| PREDICTED: uncharacterized protein LOC101207833 [Cucumis sativus] Back     alignment and taxonomy information
>gi|359478753|ref|XP_002283032.2| PREDICTED: uncharacterized protein LOC100250068 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356541181|ref|XP_003539059.1| PREDICTED: uncharacterized protein LOC100781521 [Glycine max] Back     alignment and taxonomy information
>gi|356541912|ref|XP_003539416.1| PREDICTED: uncharacterized protein LOC100783150 [Glycine max] Back     alignment and taxonomy information
>gi|15239944|ref|NP_196799.1| uncharacterized protein [Arabidopsis thaliana] gi|7630051|emb|CAB88259.1| putative protein [Arabidopsis thaliana] gi|26451123|dbj|BAC42665.1| unknown protein [Arabidopsis thaliana] gi|332004451|gb|AED91834.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297746357|emb|CBI16413.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297807309|ref|XP_002871538.1| hypothetical protein ARALYDRAFT_350453 [Arabidopsis lyrata subsp. lyrata] gi|297317375|gb|EFH47797.1| hypothetical protein ARALYDRAFT_350453 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query861
TAIR|locus:2182280861 AT5G12950 [Arabidopsis thalian 0.981 0.981 0.660 1.50000000019e-314
TAIR|locus:2182295865 AT5G12960 [Arabidopsis thalian 0.981 0.976 0.656 1.5e-310
UNIPROTKB|Q2KGY9633 MGCH7_ch7g196 "Putative unchar 0.653 0.889 0.316 4.4e-68
TAIR|locus:2182280 AT5G12950 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3017 (1067.1 bits), Expect = 1.5e-314, P = 1.5e-314
 Identities = 566/857 (66%), Positives = 678/857 (79%)

Query:     9 LVLFLSCWV--ALCKECTNSFPQLASHTFRYELLSSKNETWKKEVYSHYHLTPTDDSAWS 66
             L+L+ S +V  ++ KECTN+  QL+SHTFR ELL SKNET K E++SHYHLTP DDSAWS
Sbjct:    11 LLLYTSSFVLVSVAKECTNTPTQLSSHTFRSELLQSKNETLKTELFSHYHLTPADDSAWS 70

Query:    67 NLLPRKMLSE-TDEFSWTMIYRKMKNPDGFKLAGDFLKEVSLHDVKLDPSSLHWRAQQTN 125
             +LLPRKML E  DEF+WTM+YRK K+ +    +G+FLK+VSLHDV+LDP S HWRAQQTN
Sbjct:    71 SLLPRKMLKEEADEFAWTMLYRKFKDSNS---SGNFLKDVSLHDVRLDPDSFHWRAQQTN 127

Query:   126 LEYLLMLDVDSLVWSFQKTAGSPTAGKAYEGWEDPTCELRGHFVGHYLSASAHMWASTHN 185
             LEYLLMLDVD L WSF+K AG    G  Y GWE P  ELRGHFVGHYLSA+A+MWASTHN
Sbjct:   128 LEYLLMLDVDGLAWSFRKEAGLDAPGDYYGGWERPDSELRGHFVGHYLSATAYMWASTHN 187

Query:   186 VTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQ 245
              TLKEKM+A+VSALSECQ K G+GYLSAFPS  FDRFEA+ PVWAPYYTIHKILAGL+DQ
Sbjct:   188 DTLKEKMSALVSALSECQQKSGTGYLSAFPSSFFDRFEAITPVWAPYYTIHKILAGLVDQ 247

Query:   246 YTFADNTQALKMTKWMVEYFYNRVQNVITKYSVERHWNSLNEETGGMNDVLYRLYTITQD 305
             Y  A N+QALKM   M +YFY RV+NVI KYSVERHW SLNEETGGMNDVLY+LY+IT D
Sbjct:   248 YKLAGNSQALKMATGMADYFYGRVRNVIRKYSVERHWQSLNEETGGMNDVLYQLYSITGD 307

Query:   306 PKHLLLAHLFDKPCFLGLLAVQADDISGFHANTHIPVVIGSQMRYEVTGDPLYKVTGTFF 365
              K+LLLAHLFDKPCFLG+LA+QADDISGFHANTHIP+V+GSQ RYE+TGD L+K    FF
Sbjct:   308 SKYLLLAHLFDKPCFLGVLAIQADDISGFHANTHIPIVVGSQQRYEITGDLLHKEISMFF 367

Query:   366 MDIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVY 425
             MDI NASH YATGGTS  EFW DPKR+A+ L TENEESCTTYNMLKVSR+LFRWTKE+ Y
Sbjct:   368 MDIFNASHSYATGGTSVSEFWQDPKRMATALQTENEESCTTYNMLKVSRNLFRWTKEVSY 427

Query:   426 ADYYERALTNGVLSIQRGTEPGVMIYMLPLGRGDSKAKSYHGWGTRFSSFWCCYGTGIES 485
             ADYYERALTNGVL IQRGT+PG+MIYMLPLG+G SKA +YHGWGT + SFWCCYGTGIES
Sbjct:   428 ADYYERALTNGVLGIQRGTQPGLMIYMLPLGKGVSKAVTYHGWGTPYDSFWCCYGTGIES 487

Query:   486 FSKLGDSIYFEEEGNVPGLYIIQYISSSLDWKSGNIVLNQKVDPVVSWDPYLRMTHTFXX 545
             FSKLGDSIYF+E+G  P LY+ QYISSSLDWKS  + ++QKV+PVVSWDPY+R+T T   
Sbjct:   488 FSKLGDSIYFQEDGATPALYVTQYISSSLDWKSAGLSISQKVNPVVSWDPYMRVTFTLSS 547

Query:   546 XXXXXXX-XXLNLRIPLWTNSNGAKATLNGQSLSLPAPGNFISVTQRWSSTDKLTIQLPI 604
                       LNLRIP+WTNS GAK +LNG+ L++P  GNF+S+ Q+W S D++T++LP+
Sbjct:   548 SKVGVAKESTLNLRIPVWTNSIGAKVSLNGRPLNVPTSGNFLSIKQKWKSGDQVTMELPM 607

Query:   605 NLRTEAIKDDRPAYASIQAILYGPYLLAGHTSGDWDIKTGSAKSLSDWITPIPASYNGQL 664
             ++RTEAIKDDRP YAS+QAILYGPYLLAGHTS DW I T  AK    WITPIP + N  L
Sbjct:   608 SIRTEAIKDDRPEYASLQAILYGPYLLAGHTSRDWSITT-QAKP-GKWITPIPETQNSYL 665

Query:   665 VTFAQESGDSAFVLSNSNQSITMEKFPESGTDAALHATFRLIMKXXXXXXXXXLKDVIGK 724
             VT +Q+SG+ ++V SNSNQ+ITM   PE GT  A+ ATFRL+            + +IG+
Sbjct:   666 VTLSQQSGNVSYVFSNSNQTITMRVSPEPGTQDAVAATFRLVTDNSKPRISGP-EGLIGR 724

Query:   725 SVMLEPFDFPGMLVVQQGTDGELVV-SDSPKEGDSSVFRLVAGLDGKDETISLEAVNQNG 783
              VMLEPFDFPGM +V+Q TD  L V + SP +  +S FRLV+GLDGK  ++SL   ++ G
Sbjct:   725 LVMLEPFDFPGM-IVKQATDSSLTVQASSPSDKGASSFRLVSGLDGKLGSVSLRLESKKG 783

Query:   784 CFVYSGVNFNSGASLKLSCSTESSEDGFNEAVSFVMEKGISEYHPISFVAKGARRNFLLA 843
             CFVYS      G  L+L C ++++++ F EA SF ++ G+ +Y+P+SFV  G +RNF+L+
Sbjct:   784 CFVYSDQTLKQGTKLRLECGSDATDEKFKEAASFSLKTGMHQYNPMSFVMSGTQRNFVLS 843

Query:   844 PLLSFRDETYTVYFNIQ 860
             PL S RDETY VYF++Q
Sbjct:   844 PLFSLRDETYNVYFSVQ 860
GO:0003824 "catalytic activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005773 "vacuole" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
TAIR|locus:2182295 AT5G12960 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q2KGY9 MGCH7_ch7g196 "Putative uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query861
pfam07944511 pfam07944, DUF1680, Putative glycosyl hydrolase of 1e-162
COG3533589 COG3533, COG3533, Uncharacterized protein conserve 2e-64
>gnl|CDD|219654 pfam07944, DUF1680, Putative glycosyl hydrolase of unknown function (DUF1680) Back     alignment and domain information 
 Score =  482 bits (1242), Expect = e-162
 Identities = 195/534 (36%), Positives = 279/534 (52%), Gaps = 33/534 (6%)

Query: 109 DVKLDPSSLHWRAQQTNLEYLLMLDVDSLVWSFQKTAGSPTAGKAYEGWED--PTCELRG 166
           DV+L  S      QQTN EYLL LD D L+ +F+  AG P    AY GWED  P    RG
Sbjct: 1   DVRLTDS-FWGDRQQTNREYLLPLDPDRLLHTFRLEAGLPNKAIAYGGWEDEFPGFPFRG 59

Query: 167 HFVGHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALK 226
           H +G +LSA A+M AST +  L++++  +V  L+E Q   G GYL  +P   FDR EA  
Sbjct: 60  HDLGKWLSAVAYMLASTPDPELEKRLDRLVDELAEAQ--QGDGYLGTYPESNFDRNEAGN 117

Query: 227 PVWAP---YYTIHKILAGLLDQYTFADNTQALKMTKWMVEYFYNRVQNVITKYSVERHWN 283
             WAP    Y + K++AGL+  Y      QAL +   + ++ Y+ V +V+    +++H  
Sbjct: 118 GRWAPNHELYNLGKLIAGLVAYYQATGKRQALDVATRLADWLYD-VTSVLGDEQMQKHLY 176

Query: 284 SLNEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDISGFHANTHIP-V 342
               E GG+N+ L  LY +T D ++L LA  F     L  LA   D + G H NT I   
Sbjct: 177 P---EHGGINEALVELYELTGDKRYLDLAKRFIHNRGLDPLAYGQDHLPGRHQNTAIGHA 233

Query: 343 VIGSQMRYEVTGDPLYKVTGTFFMDIVNASHGYATGGTSAG-EFWSDPKRLASTLGTENE 401
           V G+   YE TGD        FF + V   H Y TGG  +  E +  P  L + L     
Sbjct: 234 VRGAADLYEETGDDALLKAAEFFWNNVVTRHMYVTGGNGSRHEHFGPPYDLPNRLAYC-- 291

Query: 402 ESCTTYNMLKVSRHLFRWTKEMVYADYYERALTNGVLSIQRGTEPGVMIYMLPLGRGDSK 461
           E+C +YNMLK++R +  WT +  YADYYERAL N +L+ Q   + G+  Y  PL  G  +
Sbjct: 292 ETCASYNMLKLTRRMLEWTPDAKYADYYERALYNHILAGQSP-DGGMFFYFNPLESGPKR 350

Query: 462 AKSYHGWGTRFSSFWCCYGTGIESFSKLGDSIYFEEEGNVPGLYIIQYISSSLDWKSGN- 520
            +   G+ T + S WCC G G E+ +K GD IY   +    GLY+  YI S+ DWK    
Sbjct: 351 LR--WGYSTPWDSCWCCPGNGAETHAKFGDYIYTHSD---DGLYVNLYIPSTADWKLKGG 405

Query: 521 -IVLNQKVDPVVSWDPYLRMTHTFSSKQEASQSSSLNLRIPLWTNSNGAKATLNGQSLSL 579
            + L Q+ +    WD  +R+  T  + +      +L LRIP W  + GA  T+NG+ + +
Sbjct: 406 EVTLRQETN--YPWDGQVRL--TVKTAKP--AEFTLYLRIPGW--AAGATLTVNGKPVVV 457

Query: 580 -PAPGNFISVTQRWSSTDKLTIQLPINLRTEAIKDDRPAYASIQAILYGPYLLA 632
            P    ++S+T+ W   D++ + LP+ +R EA     P  A+  A+L GP +L 
Sbjct: 458 QPKSDGYLSITREWKKGDRVELTLPMPVRLEAANPLVPDDANKVAVLRGPLVLC 511

The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One members of this family is annotated as a possible arabinosidase, but no references were found to back this. These proteins are related to a large family of glycosyl hydrolases. Length = 511
>gnl|CDD|226063 COG3533, COG3533, Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 861
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 100.0
COG3533589 Uncharacterized protein conserved in bacteria [Fun 100.0
PF05270142 AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterP 99.57
PF05270142 AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterP 99.18
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 98.87
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 98.15
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 97.87
COG1331667 Highly conserved protein containing a thioredoxin 97.87
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 97.8
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 97.77
PF07470336 Glyco_hydro_88: Glycosyl Hydrolase Family 88; Inte 97.68
cd04791321 LanC_SerThrkinase Lanthionine synthetase C-like do 97.59
cd04791321 LanC_SerThrkinase Lanthionine synthetase C-like do 97.55
COG1331667 Highly conserved protein containing a thioredoxin 97.38
COG3533589 Uncharacterized protein conserved in bacteria [Fun 97.06
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 97.0
PTZ00470522 glycoside hydrolase family 47 protein; Provisional 96.86
cd04792825 LanM-like LanM-like proteins. LanM is a bifunction 96.72
cd04434343 LanC_like LanC-like proteins. LanC is the cyclase 96.65
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 96.62
cd04794343 euk_LANCL eukaryotic Lanthionine synthetase C-like 95.72
PF06662189 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; I 95.62
cd04794343 euk_LANCL eukaryotic Lanthionine synthetase C-like 95.56
cd04434343 LanC_like LanC-like proteins. LanC is the cyclase 95.56
PF01532452 Glyco_hydro_47: Glycosyl hydrolase family 47; Inte 95.43
cd04792825 LanM-like LanM-like proteins. LanM is a bifunction 95.3
COG2942388 N-acyl-D-glucosamine 2-epimerase [Carbohydrate tra 95.11
COG4403963 LcnDR2 Lantibiotic modifying enzyme [Defense mecha 95.09
COG4225357 Predicted unsaturated glucuronyl hydrolase involve 95.01
PF07470336 Glyco_hydro_88: Glycosyl Hydrolase Family 88; Inte 94.75
PTZ00470522 glycoside hydrolase family 47 protein; Provisional 94.16
PF06662189 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; I 93.75
cd04793382 LanC LanC is the cyclase enzyme of the lanthionine 93.75
COG4225357 Predicted unsaturated glucuronyl hydrolase involve 93.61
PF01532452 Glyco_hydro_47: Glycosyl hydrolase family 47; Inte 92.57
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 90.66
KOG2244786 consensus Highly conserved protein containing a th 86.43
cd04793382 LanC LanC is the cyclase enzyme of the lanthionine 85.77
KOG2787403 consensus Lanthionine synthetase C-like protein 1 85.48
KOG2429622 consensus Glycosyl hydrolase, family 47 [Carbohydr 84.72
KOG2244786 consensus Highly conserved protein containing a th 84.53
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information 
Probab=100.00  E-value=1.9e-110  Score=973.77  Aligned_cols=499  Identities=36%  Similarity=0.631  Sum_probs=457.9

Q ss_pred             CeEeCCCCchHHHHHHHHhhhhccCcchhhHhHHHhcCCCCCCCCCCCCc--CCCcCccccchhHHHHHHHHHHHhcCCh
Q 002973          109 DVKLDPSSLHWRAQQTNLEYLLMLDVDSLVWSFQKTAGSPTAGKAYEGWE--DPTCELRGHFVGHYLSASAHMWASTHNV  186 (861)
Q Consensus       109 ~V~L~~~~~~~~~~~~~~~~ll~~d~drlL~nFR~~AGl~~~g~~ygGWE--~~d~~l~Gh~~Gh~LsAlA~~~a~t~D~  186 (861)
                      +|+|++ +||+++|+++++|++++++|+|+++||..|||+.++.++||||  +++..++||++||||||+|++|+.++|+
T Consensus         1 ~V~l~~-~~~~~~~~~~~~~~l~~~~d~ll~~~r~~agl~~~~~~~g~we~~~~~~~~~~~~~g~wl~a~a~~~~~~~D~   79 (520)
T PF07944_consen    1 DVRLTD-GFWKRRQELNRAYLLPLDPDRLLYNFRSHAGLPNFAIAYGGWEGEFPGWWFRGHDVGKWLEAAAYAYAYTGDP   79 (520)
T ss_pred             CeEECc-HHHHHHHHHHHHHHHHhHHHHHhhhcCcccCCCCccccCCCCccCCCCCccCCCcHHHHHHHHHHHHHHCCCH
Confidence            699995 8999999999999999999999999999999999988999999  8899999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHhhcCCCccccCCcchhhhhhccCCcccc----cchhHHHHHHHHHHHHHcCChhHHHHHHHHH
Q 002973          187 TLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAP----YYTIHKILAGLLDQYTFADNTQALKMTKWMV  262 (861)
Q Consensus       187 ~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~~~~~~~l~~~W~p----yYt~HkI~aGLld~y~~tG~~~aL~va~~~a  262 (861)
                      +|++|++++|+.|++||+  +||||+++++..   ..+.+..|+|    +|+.|||++||+|+|++||++++|+|++|+|
T Consensus        80 ~l~~~~d~~V~~l~~~Q~--~dGYl~~~~~~~---~~~~~~~w~~~~he~Y~~~~ll~gl~~~y~~tG~~~~L~v~~k~a  154 (520)
T PF07944_consen   80 ELKAKADEIVDELAAAQQ--PDGYLGTYPEER---NFNPDDRWAPDMHELYCLGKLLEGLIDYYEATGNERALDVATKLA  154 (520)
T ss_pred             HHHHHHHHHHHHHHHhcc--CCceeccccccc---ccccccCCCCCccceehHhHHHHHHHHHHHHHCcHHHHHHHHHHH
Confidence            999999999999999999  999999998643   1235678888    9999999999999999999999999999999


Q ss_pred             HHHHHHhhhcccccccccccccccccccchHHHHHHHHHHcCCHHHHHHhhhcccccccch--hcccCCCCCCCcccCCc
Q 002973          263 EYFYNRVQNVITKYSVERHWNSLNEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCFLGL--LAVQADDISGFHANTHI  340 (861)
Q Consensus       263 d~~~~r~~~~~~~~~~~~~~~~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~F~~~~~~~~--l~~~~D~l~g~Hanthi  340 (861)
                      ||+.+++...    ..+..+..+.+|+|||+++|+|||++|||++||+||++|++..+.++  +..++|.+++.|+|+|+
T Consensus       155 d~~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LY~~Tgd~~yL~lA~~f~~~~~~~~~~~~~~~d~~~~~~a~~~~  230 (520)
T PF07944_consen  155 DWVYRRLSRL----GPEPGQKMGYPEHGGINEALVRLYEITGDERYLDLAEYFVDQRGFDPYDLAYGQDHLPGRHANTHI  230 (520)
T ss_pred             HHHHHHhccC----CHHHhhcccccccchHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCCchhhcCccCCCcccccee
Confidence            9996655432    22223344557889999999999999999999999999999999888  88899999999999999


Q ss_pred             cchh-------HHHHHHHhcCCcHHHHHHHHHHHHhhccceeeecCCCCC---CCCCCCcccccCCCcCcccchhhHHHH
Q 002973          341 PVVI-------GSQMRYEVTGDPLYKVTGTFFMDIVNASHGYATGGTSAG---EFWSDPKRLASTLGTENEESCTTYNML  410 (861)
Q Consensus       341 P~~~-------G~a~~Y~~TGD~~y~~aa~~fwd~V~~~h~yvTGG~g~~---E~f~~p~~l~~~l~~~~~ETCas~nml  410 (861)
                      |.++       |++++|++|||++|++++++||++|+++|||+|||+|++   |+|++++++++  ...++|||++||||
T Consensus       231 ~h~vr~~y~~~g~a~~y~~tgd~~~~~a~~~~w~~v~~~~~y~tGg~g~~~~~E~f~~~~~lp~--~~~~~EtCas~~~~  308 (520)
T PF07944_consen  231 GHAVRAMYLYSGAADLYEETGDEEYLDAAENFWDNVVRHHMYATGGIGSDHEGEHFGPPYDLPN--RLAYAETCASVNMM  308 (520)
T ss_pred             eEEEEhhhhhhHHHHHHHHhCCHHHHHHHHHHHHHHHhcCeeccCCCcCCCCCccCCCCCCCCc--CCCCccccHHHHHH
Confidence            9888       999999999999999999999999999999999999998   99999999998  34569999999999


Q ss_pred             HHHHhhhcccCCchHHHHHHHHHhhhhcccccCCCCCeEEEeccCCCCCCCCcccCCCCCccCcccccCCCccchhhhcc
Q 002973          411 KVSRHLFRWTKEMVYADYYERALTNGVLSIQRGTEPGVMIYMLPLGRGDSKAKSYHGWGTRFSSFWCCYGTGIESFSKLG  490 (861)
Q Consensus       411 kl~~~Lf~~tgD~~YaD~~ERaLyN~iLa~q~~~d~g~~~Y~~PL~~g~~k~~~~~~~g~~~~~F~CC~gtg~e~~akl~  490 (861)
                      |++++||++|||++|+|+|||++||++|++|++ |+++++|+|||+++..+... ..+.+++++||||+||++|+++||+
T Consensus       309 ~~~~~L~~~tgd~~yaD~~Er~lyN~~la~~~~-d~~~~~Y~~pl~~~~~~~~~-~~~~~~~~~~~CC~~n~~r~~~~~~  386 (520)
T PF07944_consen  309 KLARRLFRLTGDARYADYYERALYNALLAGQSP-DGGSFFYFNPLNSGPYKHRW-KNYRTPWFSFWCCPGNGARGWAKLP  386 (520)
T ss_pred             HHHHHHHhcCCCchHHHHHHHHHhcccccccCC-CCCeeEEecCCccCcCcccc-ccccCCCCCCCCCcchHHHHHHHHh
Confidence            999999999999999999999999999999997 99999999999887654221 2466788999999999999999999


Q ss_pred             cceEEeecCCCCcEEEEEeeCcEEEEeecc--eEEEEEeCCCCCCCCCeeEEEEEEeCCCCCeeeEEEEeecCCccCCCc
Q 002973          491 DSIYFEEEGNVPGLYIIQYISSSLDWKSGN--IVLNQKVDPVVSWDPYLRMTHTFSSKQEASQSSSLNLRIPLWTNSNGA  568 (861)
Q Consensus       491 ~~iY~~~~~~~~~LyVnLYipStl~~~~~g--v~l~q~t~~~yp~~~~~~V~ltV~~~~~~~~~ftL~LRIP~Wa~~~~~  568 (861)
                      ++||++++   ++||||||+||+++|+.+|  |+|+|+|+  |||++  +|+|+|++.  ++.+|+|+||||+|++  ++
T Consensus       387 ~~iy~~~~---~~l~v~ly~~s~~~~~~~~~~v~i~q~T~--yP~~~--~v~i~v~~~--~~~~f~l~lRIP~Wa~--~~  455 (520)
T PF07944_consen  387 DYIYFRDD---DGLYVNLYIPSELTWPVGGGTVTITQETD--YPFEG--TVRITVSPD--KPVPFTLRLRIPSWAK--GA  455 (520)
T ss_pred             hhheEecC---CEEEEEEEcceEEEEEECCcEEEEEEecC--CCCCC--CEEEEEEcC--CCccEEEEEEccCCCC--Cc
Confidence            99999986   6999999999999999988  88888888  88998  999999874  4889999999999998  79


Q ss_pred             EEEECCee-ccCCCCCCEEEEEeeeCCCCEEEEEecceeEEEecCCCccccCCeEEEeecceeee
Q 002973          569 KATLNGQS-LSLPAPGNFISVTQRWSSTDKLTIQLPINLRTEAIKDDRPAYASIQAILYGPYLLA  632 (861)
Q Consensus       569 ~v~VNG~~-v~~~~~ggY~~I~R~Wk~GD~V~L~LPm~lr~~~~~d~~~~~~~~vAv~rGPlVlA  632 (861)
                      +|+|||++ .....++||++|+|+|++||+|+|+|||++|++++++.++...+++||+|||||||
T Consensus       456 ~i~vNG~~~~~~~~~~gy~~i~r~W~~gD~v~l~lpm~~r~~~~~~~~~~~~~~vAv~rGPlV~a  520 (520)
T PF07944_consen  456 TIRVNGEPVVDTAVPGGYLTIEREWKDGDVVELRLPMEVRLEPANPRVPDDPGRVAVMRGPLVYA  520 (520)
T ss_pred             EEEECCEeCCCCcCCCCeEEEEeeccCCcEEEEEecCeeEEEeCCCCCccCCCeEEEEeCchhcC
Confidence            99999999 55567999999999999999999999999999999777777789999999999998

One member of this family is annotated as a possible arabinosidase, but no references were found to back this.
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF05270 AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterPro: IPR007934 This family consists of several fungal alpha-L-arabinofuranosidase B proteins Back     alignment and domain information
>PF05270 AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterPro: IPR007934 This family consists of several fungal alpha-L-arabinofuranosidase B proteins Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [] Back     alignment and domain information
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases Back     alignment and domain information
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>PTZ00470 glycoside hydrolase family 47 protein; Provisional Back     alignment and domain information
>cd04792 LanM-like LanM-like proteins Back     alignment and domain information
>cd04434 LanC_like LanC-like proteins Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>cd04794 euk_LANCL eukaryotic Lanthionine synthetase C-like protein Back     alignment and domain information
>PF06662 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; InterPro: IPR010598 This entry consists of known or predicted D-glucuronyl C5-epimerases which share a common C-terminal region Back     alignment and domain information
>cd04794 euk_LANCL eukaryotic Lanthionine synthetase C-like protein Back     alignment and domain information
>cd04434 LanC_like LanC-like proteins Back     alignment and domain information
>PF01532 Glyco_hydro_47: Glycosyl hydrolase family 47; InterPro: IPR001382 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd04792 LanM-like LanM-like proteins Back     alignment and domain information
>COG2942 N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG4403 LcnDR2 Lantibiotic modifying enzyme [Defense mechanisms] Back     alignment and domain information
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only] Back     alignment and domain information
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [] Back     alignment and domain information
>PTZ00470 glycoside hydrolase family 47 protein; Provisional Back     alignment and domain information
>PF06662 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; InterPro: IPR010598 This entry consists of known or predicted D-glucuronyl C5-epimerases which share a common C-terminal region Back     alignment and domain information
>cd04793 LanC LanC is the cyclase enzyme of the lanthionine synthetase Back     alignment and domain information
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only] Back     alignment and domain information
>PF01532 Glyco_hydro_47: Glycosyl hydrolase family 47; InterPro: IPR001382 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>KOG2244 consensus Highly conserved protein containing a thioredoxin domain [General function prediction only] Back     alignment and domain information
>cd04793 LanC LanC is the cyclase enzyme of the lanthionine synthetase Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>KOG2429 consensus Glycosyl hydrolase, family 47 [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2244 consensus Highly conserved protein containing a thioredoxin domain [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query861
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 47.2 bits (111), Expect = 3e-05
 Identities = 56/322 (17%), Positives = 101/322 (31%), Gaps = 110/322 (34%)

Query: 42  SKNETWKKEVYSHYHLTPTDDSAWSNLLPRKMLSETDEFSWTMIYRKMKNP----DGFK- 96
           + +E   K +   Y      D      LPR++L+ T+    ++I   +++     D +K 
Sbjct: 299 TPDEV--KSLLLKYLDCRPQD------LPREVLT-TNPRRLSIIAESIRDGLATWDNWKH 349

Query: 97  LAGDFLK---EVSLHDVKLDPSSLHWRAQQTNLEYLLMLDVDSLVWSFQKTAGSPTAGKA 153
           +  D L    E SL+   L+P+       +   + L +    + +         PT    
Sbjct: 350 VNCDKLTTIIESSLN--VLEPAEY-----RKMFDRLSVFPPSAHI---------PT--IL 391

Query: 154 YEG-WEDPTCELRGHFVGHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNKMGSGYLS 212
               W D         V      S                      L E Q K  +  + 
Sbjct: 392 LSLIWFDVIKSDVMVVVNKLHKYS----------------------LVEKQPKESTISI- 428

Query: 213 AFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTFADNTQALKMTK-WMVEYFYN---- 267
             PS   +    LK      Y +H+ +   +D Y       +  +   ++ +YFY+    
Sbjct: 429 --PSIYLE----LKVKLENEYALHRSI---VDHYNIPKTFDSDDLIPPYLDQYFYSHIGH 479

Query: 268 ---------------------R-VQNVITKYSVERHWNSLNEETGGMNDVL-----YRLY 300
                                R ++  I      RH ++    +G + + L     Y+ Y
Sbjct: 480 HLKNIEHPERMTLFRMVFLDFRFLEQKI------RHDSTAWNASGSILNTLQQLKFYKPY 533

Query: 301 TITQDPK-HLLLAHLFDKPCFL 321
               DPK   L+  + D   FL
Sbjct: 534 ICDNDPKYERLVNAILD---FL 552
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query861
3kmv_A157 Alpha-L-arabinofuranosidase B; protein:carboydrate 99.76
1wd3_A482 Alpha-L-arabinofuranosidase B; beta-sandwich, beta 99.75
3kmv_A157 Alpha-L-arabinofuranosidase B; protein:carboydrate 99.59
3akh_A468 Putative secreted alpha L-arabinofuranosidase II; 99.15
1wd3_A482 Alpha-L-arabinofuranosidase B; beta-sandwich, beta 99.01
3akh_A468 Putative secreted alpha L-arabinofuranosidase II; 98.88
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 98.81
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 98.79
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 98.77
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 98.67
3pmm_A382 Putative cytoplasmic protein; structural genomics, 98.62
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 98.46
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 98.43
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 98.32
1nc5_A373 Hypothetical protein YTER; structural genomics, he 98.29
3k11_A445 Putative glycosyl hydrolase; structural genomics, 98.23
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 98.21
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 98.07
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 98.04
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 97.79
1nc5_A373 Hypothetical protein YTER; structural genomics, he 97.74
3pmm_A382 Putative cytoplasmic protein; structural genomics, 97.68
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 97.62
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 97.56
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 97.41
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 96.63
1nxc_A478 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; 95.98
3k11_A445 Putative glycosyl hydrolase; structural genomics, 95.93
1dl2_A511 Class I alpha-1,2-mannosidase; alpha-alpha helix b 95.42
3e6u_A411 LANC-like protein 1; alpha barrel, cytoplasm, sign 95.33
1x9d_A538 Endoplasmic reticulum mannosyl-oligosaccharide 1, 94.59
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 94.57
1nxc_A478 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; 94.32
2ri9_A475 Mannosyl-oligosaccharide alpha-1,2-mannosidase; al 93.97
1x9d_A538 Endoplasmic reticulum mannosyl-oligosaccharide 1, 93.51
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 92.83
1hcu_A503 Alpha-1,2-mannosidase; glycosylation, glycosyl hyd 92.58
2ri9_A475 Mannosyl-oligosaccharide alpha-1,2-mannosidase; al 92.5
1hcu_A503 Alpha-1,2-mannosidase; glycosylation, glycosyl hyd 92.27
3e6u_A411 LANC-like protein 1; alpha barrel, cytoplasm, sign 92.14
1tf4_A605 T. fusca endo/EXO-cellulase E4 catalytic domain an 91.56
2g0d_A409 Nisin biosynthesis protein NISC; alpha toroid, alp 91.36
1g87_A614 Endocellulase 9G; endoglucanase, cellulose binding 91.24
1dl2_A511 Class I alpha-1,2-mannosidase; alpha-alpha helix b 91.1
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 90.76
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 86.85
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 83.66
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum} Back     alignment and structure
Probab=99.76  E-value=1.2e-18  Score=171.13  Aligned_cols=112  Identities=20%  Similarity=0.358  Sum_probs=97.9

Q ss_pred             CceeeecCCCCCCceeeeeccccceEEeCCCCCCCCceEEEeecCCCCC-ceEEEeccCCCCeeEEeccccCCCceEEEE
Q 002973          723 GKSVMLEPFDFPGMLVVQQGTDGELVVSDSPKEGDSSVFRLVAGLDGKD-ETISLEAVNQNGCFVYSGVNFNSGASLKLS  801 (861)
Q Consensus       723 g~~v~lepfd~Pg~~v~~~~~~~~l~v~~~~~~~~~s~f~~vpgl~g~~-g~vsle~~~~pg~~~~~~~~~~~g~~~~~~  801 (861)
                      ++.|+||+++.||+||+|++...+  ++.++...+|++|++||||++.+ |+|||||+++||+|||+     .|..|+|+
T Consensus         8 ~~~vsl~S~n~p~~ylRh~~~~~~--~~~~~~~~~datF~vvpGLa~~~~g~VSfES~n~Pg~yLRh-----~~~~l~L~   80 (157)
T 3kmv_A            8 ITKAKFQSYNYPNMYIRHANFDAR--IDENVTPEMDSQWELVPGLANSGDGYVSIQSVNYPGYYLRH-----SNYDLSLE   80 (157)
T ss_dssp             --CBEEEESSSTTCEEEEETTEEE--EESSCSSGGGGCEEEEECSSCCSTTEEEEEESSSTTEEEEE-----ETTEEEEE
T ss_pred             CccEEEEecCCCCcEEEEeCCeEE--EccCCCCccCceEEEeCCcCCCCCCEEEEEECCCCCcEEEE-----eCCEEEEe
Confidence            458999999999999999955554  45556668899999999998765 89999999999999998     38899999


Q ss_pred             eccCCCccccccccceecccCccccCCceEEEecCCCceecc
Q 002973          802 CSTESSEDGFNEAVSFVMEKGISEYHPISFVAKGARRNFLLA  843 (861)
Q Consensus       802 ~~~~~~~~~f~~~asf~~~~gl~~~~piSf~a~g~~~~~ll~  843 (861)
                      + . ++++.|+++|+|...+||++...+||++...++.||..
T Consensus        81 ~-~-~~s~~f~~dATF~~~~GLa~~~~vSfeS~n~Pg~yLrh  120 (157)
T 3kmv_A           81 K-N-DGTSLFAESATFKIVPGLADPSYISFQSYNFPTRYIRH  120 (157)
T ss_dssp             E-C-CSCHHHHHTTCEEEEECSSCTTSEEEEESSSTTEEEEE
T ss_pred             c-c-CCCCCccCCceEEEccCccCCCcEEEEEEcCCCeEEEE
Confidence            6 3 66778999999999999999999999999999999976
>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A* Back     alignment and structure
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum} Back     alignment and structure
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* Back     alignment and structure
>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A* Back     alignment and structure
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1 Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A* Back     alignment and structure
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A* Back     alignment and structure
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A Back     alignment and structure
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Back     alignment and structure
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1 Back     alignment and structure
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A* Back     alignment and structure
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Back     alignment and structure
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1 Back     alignment and structure
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A* Back     alignment and structure
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1 Back     alignment and structure
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A* Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Back     alignment and structure
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Back     alignment and structure
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A* Back     alignment and structure
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query861
d1wd3a2162 Alpha-L-arabinofuranosidase B (AbfB), C-terminal d 99.5
d1wd3a2162 Alpha-L-arabinofuranosidase B (AbfB), C-terminal d 99.19
d2d5ja1377 Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 98.65
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 97.93
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 97.79
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 97.63
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 97.36
d2d5ja1377 Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 96.95
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 96.65
d1nxca_467 Class I alpha-1;2-mannosidase, catalytic domain {M 96.49
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 96.21
d1dl2a_511 Class I alpha-1;2-mannosidase, catalytic domain {B 96.18
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 96.01
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 95.96
d1x9da1453 Class I alpha-1;2-mannosidase, catalytic domain {H 95.38
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 95.29
d1hcua_488 Class I alpha-1;2-mannosidase, catalytic domain {T 95.11
d1g87a1454 Endo/exocellulase:cellobiose E-4, N-terminal domai 94.7
d1tf4a1460 Endo/exocellulase:cellobiose E-4, N-terminal domai 94.43
d1nxca_467 Class I alpha-1;2-mannosidase, catalytic domain {M 93.19
d2ri9a1475 Class I alpha-1;2-mannosidase, catalytic domain {F 93.03
d1clca1441 CelD cellulase, C-terminal domain {Clostridium the 92.99
d1dl2a_511 Class I alpha-1;2-mannosidase, catalytic domain {B 91.77
d1x9da1453 Class I alpha-1;2-mannosidase, catalytic domain {H 91.77
d1hcua_488 Class I alpha-1;2-mannosidase, catalytic domain {T 91.67
d2ri9a1475 Class I alpha-1;2-mannosidase, catalytic domain {F 86.46
>d1wd3a2 b.42.8.1 (A:338-499) Alpha-L-arabinofuranosidase B (AbfB), C-terminal domain {Aspergillus kawachii [TaxId: 40384]} Back     information, alignment and structure
class: All beta proteins
fold: beta-Trefoil
superfamily: AbfB domain
family: AbfB domain
domain: Alpha-L-arabinofuranosidase B (AbfB), C-terminal domain
species: Aspergillus kawachii [TaxId: 40384]

Probab=99.50  E-value=2.4e-14  Score=138.64  Aligned_cols=116  Identities=15%  Similarity=0.239  Sum_probs=95.0

Q ss_pred             ccCCce--eeecCCCCCCceeeeeccccceEEeCCCCC---CCCceEEEeecCCCCCceEEEeccCCCCeeEEeccccCC
Q 002973          720 DVIGKS--VMLEPFDFPGMLVVQQGTDGELVVSDSPKE---GDSSVFRLVAGLDGKDETISLEAVNQNGCFVYSGVNFNS  794 (861)
Q Consensus       720 ~~~g~~--v~lepfd~Pg~~v~~~~~~~~l~v~~~~~~---~~~s~f~~vpgl~g~~g~vsle~~~~pg~~~~~~~~~~~  794 (861)
                      -..|+.  ++++....|+++|+|++.-.+|.+..+..+   ..|++|+|||||.+ +|+|||||++.||.|||+ .    
T Consensus         7 l~~G~~~slr~~s~~y~~rylrH~~~~~~l~~v~~~s~~~~k~dasf~v~~Gl~~-~~~vSfES~n~Pg~yLRH-~----   80 (162)
T d1wd3a2           7 FTSGEVVSLRVTTPGYTTRYIAHTDTTVNTQVVDDDSSTTLKEEASWTVVTGLAN-SQCFSFESVDTPGSYIRH-Y----   80 (162)
T ss_dssp             CCTTCEEEEEECSTTCTTEEEEEETTEEEEEECCTTSCHHHHHHTCEEEEECSSC-TTSEEEEESSSTTEEEEE-E----
T ss_pred             cccCceEEEEEeCCCCCceEEEEcCCcEEEEeccCCcchhhcccceEEEccCcCC-CCeEEEEEcCCCCcEEEE-E----
Confidence            345554  446899999999999966666655333222   46899999999998 799999999999999998 3    


Q ss_pred             CceEEEEeccCCCccccccccceecccCccccCCceEEEecCCCceeccc
Q 002973          795 GASLKLSCSTESSEDGFNEAVSFVMEKGISEYHPISFVAKGARRNFLLAP  844 (861)
Q Consensus       795 g~~~~~~~~~~~~~~~f~~~asf~~~~gl~~~~piSf~a~g~~~~~ll~p  844 (861)
                      +..|+|. +. ++++.|+++|||...+|| ....+||+...-+..||.+=
T Consensus        81 n~~l~L~-~~-d~s~~F~~DATF~~~~gl-~~~g~SfeS~n~p~~YlRH~  127 (162)
T d1wd3a2          81 NFELLLN-AN-DGTKQFHEDATFCPQAAL-NGEGTSLRSWSYPTRYFRHY  127 (162)
T ss_dssp             TTEEEEE-EC-CCCHHHHHHTCEEEEECT-TSSSEEEEESSSTTCEEEEE
T ss_pred             CCEEEEe-cC-CCccccccCceEEEeeCc-CCCceEEEEecCCCceEEee
Confidence            7789999 65 788889999999999999 55789999999999888643
>d1wd3a2 b.42.8.1 (A:338-499) Alpha-L-arabinofuranosidase B (AbfB), C-terminal domain {Aspergillus kawachii [TaxId: 40384]} Back     information, alignment and structure
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1nxca_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1dl2a_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1hcua_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1nxca_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2ri9a1 a.102.2.1 (A:1036-1510) Class I alpha-1;2-mannosidase, catalytic domain {Fungus (Penicillium citrinum) [TaxId: 5077]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1dl2a_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hcua_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d2ri9a1 a.102.2.1 (A:1036-1510) Class I alpha-1;2-mannosidase, catalytic domain {Fungus (Penicillium citrinum) [TaxId: 5077]} Back     information, alignment and structure