Citrus Sinensis ID: 002982
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 861 | 2.2.26 [Sep-21-2011] | |||||||
| Q6S001 | 685 | Kinesin-related protein 1 | yes | no | 0.351 | 0.442 | 0.489 | 4e-80 | |
| Q54NP8 | 1922 | Kinesin-related protein 4 | no | no | 0.355 | 0.159 | 0.447 | 8e-77 | |
| Q6RT24 | 2474 | Centromere-associated pro | yes | no | 0.339 | 0.118 | 0.463 | 3e-70 | |
| Q02224 | 2701 | Centromere-associated pro | yes | no | 0.340 | 0.108 | 0.452 | 6e-68 | |
| O60282 | 957 | Kinesin heavy chain isofo | no | no | 0.336 | 0.303 | 0.417 | 3e-62 | |
| P28738 | 956 | Kinesin heavy chain isofo | no | no | 0.336 | 0.303 | 0.417 | 7e-62 | |
| P28741 | 701 | Kinesin-like protein KIF3 | no | no | 0.377 | 0.463 | 0.392 | 3e-61 | |
| Q4R628 | 702 | Kinesin-like protein KIF3 | N/A | no | 0.377 | 0.462 | 0.395 | 3e-61 | |
| Q5R4H3 | 702 | Kinesin-like protein KIF3 | no | no | 0.377 | 0.462 | 0.395 | 4e-61 | |
| Q61768 | 963 | Kinesin-1 heavy chain OS= | no | no | 0.336 | 0.301 | 0.411 | 5e-61 |
| >sp|Q6S001|KIF11_DICDI Kinesin-related protein 11 OS=Dictyostelium discoideum GN=kif11 PE=3 SV=1 | Back alignment and function desciption |
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Score = 300 bits (767), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 184/376 (48%), Positives = 225/376 (59%), Gaps = 73/376 (19%)
Query: 108 AYAYDRVFGPTTTTRHVYDIAAQHVVSGAMDGINGTIFAYGVTSSGKTHTM--------- 158
+Y YD +F PT VYD A+ +V AM+G N +I AYG+TSSGKT TM
Sbjct: 116 SYTYDHLFPPTCDNYEVYDTVARELVKSAMEGYNASIMAYGITSSGKTFTMTGSGKKNPG 175
Query: 159 --------------HTPNREFLLRVSYLEIYNEVVNDLL--NPAGQNLRIREDS-QGTFV 201
REFLLRVSYLEIYNE VNDLL N NL+I E G +V
Sbjct: 176 IIPLSIQDIFTYIQECKEREFLLRVSYLEIYNETVNDLLGVNQENFNLKIHEHPVTGVYV 235
Query: 202 EGVKEEVVLSPAHALSLIAAGEEHRHVGSTNFNLLSSRSHTIFTLTIESS---PCGENSA 258
G+KEE+VLS H LSLI+AGE HRHVGST++NL SSRSHTIF + IES P G S
Sbjct: 236 AGLKEEIVLSVEHVLSLISAGEAHRHVGSTSYNLQSSRSHTIFKMIIESKEVLPEGSGSG 295
Query: 259 G--EAVNLSQLHLIDLAGSE-SSKAETTGVRRKEGSYINKSLLTLGTVISKLTDGRATHI 315
G V S L+LIDLAGSE +S++ + +R KEGSYINKSLLTLGTVISKL++ +I
Sbjct: 296 GLESPVRYSTLNLIDLAGSEKASESTISAIRNKEGSYINKSLLTLGTVISKLSEKDTGYI 355
Query: 316 PYRDSKLTRLLQSSLSGHGRVSLICTVTPSSSSSEETHNTLKFAHRAKHI---------- 365
PYRDSKLTR+LQ+SLSG+ RV++ICT+T +S++ EE+HNTLKFA RAK I
Sbjct: 356 PYRDSKLTRVLQNSLSGNSRVAIICTITLASNNFEESHNTLKFASRAKKISNNAKVNEIL 415
Query: 366 -----------EILAAQNKLEDG---QVKLQSRLEEEEDAK-----------------SA 394
EI ++KL D + +LQ L E+E K S
Sbjct: 416 DDKALLKQYRNEIAELKSKLSDALSTEKELQETLTEKEKMKITNQELLHKLVDAEKHRSL 475
Query: 395 LLSRIQRLTKLILVSS 410
L S+I L KLILVS+
Sbjct: 476 LESKINNLNKLILVST 491
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Microtubule-associated force-producing protein that plays a role in organelle transport. Its motor activity is directed toward the microtubule's plus end. Dictyostelium discoideum (taxid: 44689) |
| >sp|Q54NP8|KIF4_DICDI Kinesin-related protein 4 OS=Dictyostelium discoideum GN=kif4 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q6RT24|CENPE_MOUSE Centromere-associated protein E OS=Mus musculus GN=Cenpe PE=1 SV=1 | Back alignment and function description |
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| >sp|Q02224|CENPE_HUMAN Centromere-associated protein E OS=Homo sapiens GN=CENPE PE=1 SV=2 | Back alignment and function description |
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| >sp|O60282|KIF5C_HUMAN Kinesin heavy chain isoform 5C OS=Homo sapiens GN=KIF5C PE=1 SV=1 | Back alignment and function description |
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| >sp|P28738|KIF5C_MOUSE Kinesin heavy chain isoform 5C OS=Mus musculus GN=Kif5c PE=1 SV=3 | Back alignment and function description |
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| >sp|P28741|KIF3A_MOUSE Kinesin-like protein KIF3A OS=Mus musculus GN=Kif3a PE=1 SV=2 | Back alignment and function description |
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| >sp|Q4R628|KIF3A_MACFA Kinesin-like protein KIF3A OS=Macaca fascicularis GN=KIF3A PE=2 SV=1 | Back alignment and function description |
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| >sp|Q5R4H3|KIF3A_PONAB Kinesin-like protein KIF3A OS=Pongo abelii GN=KIF3A PE=2 SV=1 | Back alignment and function description |
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| >sp|Q61768|KINH_MOUSE Kinesin-1 heavy chain OS=Mus musculus GN=Kif5b PE=1 SV=3 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 861 | ||||||
| 255579037 | 1010 | kinesin heavy chain, putative [Ricinus c | 0.997 | 0.850 | 0.703 | 0.0 | |
| 224088174 | 1011 | predicted protein [Populus trichocarpa] | 0.993 | 0.845 | 0.697 | 0.0 | |
| 297739808 | 998 | unnamed protein product [Vitis vinifera] | 0.967 | 0.834 | 0.692 | 0.0 | |
| 359482160 | 978 | PREDICTED: uncharacterized protein LOC10 | 0.944 | 0.831 | 0.686 | 0.0 | |
| 356572132 | 1014 | PREDICTED: uncharacterized protein LOC10 | 0.995 | 0.845 | 0.657 | 0.0 | |
| 224139904 | 924 | predicted protein [Populus trichocarpa] | 0.879 | 0.819 | 0.681 | 0.0 | |
| 357510037 | 1408 | Kinesin-like protein [Medicago truncatul | 0.995 | 0.608 | 0.662 | 0.0 | |
| 356503499 | 1007 | PREDICTED: uncharacterized protein LOC10 | 0.989 | 0.846 | 0.650 | 0.0 | |
| 449453866 | 975 | PREDICTED: uncharacterized protein LOC10 | 0.950 | 0.838 | 0.661 | 0.0 | |
| 356500421 | 989 | PREDICTED: uncharacterized protein LOC10 | 0.977 | 0.851 | 0.655 | 0.0 |
| >gi|255579037|ref|XP_002530370.1| kinesin heavy chain, putative [Ricinus communis] gi|223530117|gb|EEF32031.1| kinesin heavy chain, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1302 bits (3369), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 708/1006 (70%), Positives = 778/1006 (77%), Gaps = 147/1006 (14%)
Query: 2 SSRRGSKSKRL-LDSSSLKAANSPSSSTTSSSKRFLETSIDGQSSPASSSARSKPQYYYT 60
+ ++GSK K+ L + S NSPSSSTTSSSK+F+ETSIDGQSSPASSSARSKPQY+Y+
Sbjct: 3 TKQQGSKWKKTSLSNFSKGVMNSPSSSTTSSSKQFIETSIDGQSSPASSSARSKPQYFYS 62
Query: 61 ENPS-----SKENVTVTVRFRPLSPREIRQGEEIAWYADGETILRNEDNPSIAYAYDRVF 115
EN S SKENVTVTVRFRPLSPREIRQGEEIAWYADGETI+RNE NPSIAYAYDRVF
Sbjct: 63 ENVSLDAERSKENVTVTVRFRPLSPREIRQGEEIAWYADGETIVRNEHNPSIAYAYDRVF 122
Query: 116 GPTTTTRHVYDIAAQHVVSGAMDGINGTIFAYGVTSSGKTHTMH---------------- 159
GPTTTTRHVYD+AAQHVV GAM+G+NGTIFAYGVTSSGKTHTMH
Sbjct: 123 GPTTTTRHVYDVAAQHVVGGAMEGVNGTIFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDA 182
Query: 160 ------TPNREFLLRVSYLEIYNEVVNDLLNPAGQNLRIREDSQGTFVEGVKEEVVLSPA 213
TPNREFLLRVSYLEIYNEVVNDLLNPAGQNLRIRED+QGT+VEG+KEEVVLSPA
Sbjct: 183 FSIIQETPNREFLLRVSYLEIYNEVVNDLLNPAGQNLRIREDAQGTYVEGIKEEVVLSPA 242
Query: 214 HALSLIAAGEEHRHVGSTNFNLLSSRSHTIFTLTIESSPCGENSAGEAVNLSQLHLIDLA 273
HALSLIAAGEEHRHVGSTNFNLLSSRSHTIFTLTIESSPCGEN+ GEAVNLSQL+LIDLA
Sbjct: 243 HALSLIAAGEEHRHVGSTNFNLLSSRSHTIFTLTIESSPCGENNEGEAVNLSQLNLIDLA 302
Query: 274 GSESSKAETTGVRRKEGSYINKSLLTLGTVISKLTDGRATHIPYRDSKLTRLLQSSLSGH 333
GSESSKAETTG+RRKEGSYINKSLLTLGTVISKLTDGRATHIPYRDSKLTRLLQSSLSGH
Sbjct: 303 GSESSKAETTGMRRKEGSYINKSLLTLGTVISKLTDGRATHIPYRDSKLTRLLQSSLSGH 362
Query: 334 GRVSLICTVTPSSSSSEETHNTLKFAHRAKHIEILAAQN--------------------- 372
GRVSLICTVTPSSS+ EETHNTLKFAHRAKHIEI AAQN
Sbjct: 363 GRVSLICTVTPSSSNCEETHNTLKFAHRAKHIEIQAAQNKIIDEKSLIKKYQNEIRSLKE 422
Query: 373 ----------------------------KLEDGQVKLQSRLEEEEDAKSALLSRIQRLTK 404
KLEDGQVKLQSRLE+EE+AK+ALLSRIQ LTK
Sbjct: 423 ELEQLRRGIVTVPQLKDMVEDDIVLLKQKLEDGQVKLQSRLEQEEEAKAALLSRIQHLTK 482
Query: 405 LILVSSKASQSPRVPHRPGPRRRHSFGEEE-------KRDSSL----------------- 440
LILVSSKASQS R PHRPGPRRRHSFGEEE +RD L
Sbjct: 483 LILVSSKASQSSRFPHRPGPRRRHSFGEEELAYLPYKRRDLMLDDENIDLYVSLEGNSTE 542
Query: 441 ----------------------------GPLTSTSDKSSGIKSTSTPSTPRAESINFRTE 472
G TSTSD+SSG+KS STPSTP+AE+ N+ TE
Sbjct: 543 TTDDTLKEEKKSRKHGLLNWLKLRKRDSGMGTSTSDRSSGVKSNSTPSTPQAENSNYHTE 602
Query: 473 SRLSQSLLTETSPSADLLSDARHDRGVPEDSFLGQETPSTSIKTIDQIDLLREQQKILAG 532
SR S LLTE+SPSADLLSD R D VPED+FLGQETPSTSI+T DQI+LLREQQKIL+G
Sbjct: 603 SRFSNPLLTESSPSADLLSDIRLDTEVPEDNFLGQETPSTSIRTSDQIELLREQQKILSG 662
Query: 533 EVALHSSALKRLSEEAARNPQKEQLQVEIKKLRDEIKGKNDQIALLEKQIADSIMTSHNT 592
EVALHSSALKRLSEEA+RNPQKEQ+ VEIKKL DEIK KN+QIA LEKQIADS+M SHN
Sbjct: 663 EVALHSSALKRLSEEASRNPQKEQIHVEIKKLNDEIKVKNEQIASLEKQIADSVMASHNK 722
Query: 593 MDNSEVS-----------------QVKAADNRIIQEQLNQKICECEGLQETIGFLKQQLN 635
+D S+ S +VKAADNR+IQEQLNQKICECEGLQETI LKQQL
Sbjct: 723 IDKSDASLTIAELMGQLNEKSFELEVKAADNRVIQEQLNQKICECEGLQETIVSLKQQLA 782
Query: 636 DALELRNFSPLASYSQRFAEAKSLNGEHQIDKEIALLKDINEDSRLQVQAAEIEELNRKV 695
DA E+RN SPL SYSQR A+ KSL+ HQ++KE A +D ED Q QA E EEL +KV
Sbjct: 783 DAQEMRNPSPLPSYSQRLAQLKSLHEPHQVEKENAATEDRKEDLLRQAQANETEELKQKV 842
Query: 696 TELTEAKEQLELRNQKLSEESSYAKGLASAAAVELKALSEEVAKLMNHKERLTAELAAAK 755
LTE+KEQLELRNQKL+EESSYAKGLASAAAVELKALSEEV+KLMNH ERL+AELA+ K
Sbjct: 843 DVLTESKEQLELRNQKLAEESSYAKGLASAAAVELKALSEEVSKLMNHNERLSAELASLK 902
Query: 756 SSPTQ-RRTSAVRNGRRDGQIKRQNQDGSSLDLKRELALSREREVSYEAALLEKDQQEAE 814
SSP Q R +S VRNGRR+ +KRQ+Q G + +LK+ELAL R+RE+ YEAAL+EKDQ+EA+
Sbjct: 903 SSPPQCRSSSTVRNGRRENHVKRQDQVGPTSELKKELALCRDRELQYEAALMEKDQREAD 962
Query: 815 LQRKVEESKKREAYLENELANMWVLVAKLKKSHGADTDGSETTRET 860
LQ KVEESK REAYLENELANMW+LVAKLKKSHGAD D SE+TR++
Sbjct: 963 LQSKVEESKHREAYLENELANMWILVAKLKKSHGADIDISESTRDS 1008
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224088174|ref|XP_002308355.1| predicted protein [Populus trichocarpa] gi|222854331|gb|EEE91878.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|297739808|emb|CBI29990.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359482160|ref|XP_003632720.1| PREDICTED: uncharacterized protein LOC100257143 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356572132|ref|XP_003554224.1| PREDICTED: uncharacterized protein LOC100815027 [Glycine max] | Back alignment and taxonomy information |
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| >gi|224139904|ref|XP_002323333.1| predicted protein [Populus trichocarpa] gi|222867963|gb|EEF05094.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|357510037|ref|XP_003625307.1| Kinesin-like protein [Medicago truncatula] gi|355500322|gb|AES81525.1| Kinesin-like protein [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356503499|ref|XP_003520545.1| PREDICTED: uncharacterized protein LOC100787892 [Glycine max] | Back alignment and taxonomy information |
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| >gi|449453866|ref|XP_004144677.1| PREDICTED: uncharacterized protein LOC101206057 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356500421|ref|XP_003519030.1| PREDICTED: uncharacterized protein LOC100809643 [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 861 | ||||||
| TAIR|locus:2050044 | 1058 | AT2G21380 [Arabidopsis thalian | 0.781 | 0.636 | 0.463 | 2.1e-167 | |
| TAIR|locus:2036987 | 890 | AT1G21730 [Arabidopsis thalian | 0.264 | 0.256 | 0.768 | 5.4e-155 | |
| TAIR|locus:2120187 | 1055 | AT4G39050 [Arabidopsis thalian | 0.752 | 0.614 | 0.450 | 7.1e-154 | |
| TAIR|locus:2144103 | 986 | AT5G06670 [Arabidopsis thalian | 0.469 | 0.409 | 0.535 | 3.6e-148 | |
| DICTYBASE|DDB_G0291039 | 685 | kif11 "kinesin-7" [Dictyosteli | 0.279 | 0.351 | 0.568 | 8.3e-88 | |
| TAIR|locus:2202862 | 823 | ZCF125 [Arabidopsis thaliana ( | 0.760 | 0.795 | 0.299 | 3.5e-66 | |
| UNIPROTKB|O42263 | 2954 | cenpe "Kinesin-related protein | 0.270 | 0.078 | 0.471 | 3.4e-65 | |
| DICTYBASE|DDB_G0285101 | 1922 | kif4 "kinesin-7" [Dictyosteliu | 0.742 | 0.332 | 0.282 | 5.3e-65 | |
| RGD|1307115 | 1968 | Cenpe "centromere protein E" [ | 0.270 | 0.118 | 0.456 | 2.7e-64 | |
| MGI|MGI:1098230 | 2474 | Cenpe "centromere protein E" [ | 0.270 | 0.094 | 0.456 | 3.7e-64 |
| TAIR|locus:2050044 AT2G21380 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1305 (464.4 bits), Expect = 2.1e-167, Sum P(2) = 2.1e-167
Identities = 332/717 (46%), Positives = 441/717 (61%)
Query: 160 TPNREFLLRVSYLEIYNEVVNDLLNPAGQNLRIREDSQGTFVEGVKEEVVLSPAHALSLI 219
T REFLLRVSYLEIYNEV+NDLL+P GQNLRIREDSQGT+VEG+KEEVVLSP HALS I
Sbjct: 218 TTGREFLLRVSYLEIYNEVINDLLDPTGQNLRIREDSQGTYVEGIKEEVVLSPGHALSFI 277
Query: 220 AAGEEHRHVGSTNFNLLSSRSHTIFTLTIESSPCGENSAGEAVNLSQLHLIDLAGSESSK 279
AAGEEHRHVGS NFNL+SSRSHTIFTL IESS G+ G V SQL+LIDLAGSESSK
Sbjct: 278 AAGEEHRHVGSNNFNLMSSRSHTIFTLMIESSAHGDQYDG--VIFSQLNLIDLAGSESSK 335
Query: 280 AETTGVRRKEGSYINKSLLTLGTVISKLTDGRATHIPYRDSKLTRLLQSSLSGHGRVSLI 339
ETTG+RRKEG+YINKSLLTLGTVI KLT+G+ TH+P+RDSKLTRLLQSSLSGHG VSLI
Sbjct: 336 TETTGLRRKEGAYINKSLLTLGTVIGKLTEGKTTHVPFRDSKLTRLLQSSLSGHGHVSLI 395
Query: 340 CTVTPXXXXXXXTHNTLKFAHRAKHIEILAAQNKLEDGQVKLQSRLEEEEDAKSALLSRI 399
CTVTP THNTLKFA RAK IEI A++NK+ D + L + ++E L ++
Sbjct: 396 CTVTPASSSTEETHNTLKFASRAKRIEINASRNKIID-EKSLIKKYQKEISTLKVELDQL 454
Query: 400 QRLTKLILVSSKASQSXXXXXXXXXXXXXSFGEEEK--------RDSSLGPLTSTSDKSS 451
+R L+ VS + S S EEE+ R L L S K+S
Sbjct: 455 RRGV-LVGVSHEELLSLKQQLQEGQVKMQSRLEEEEEAKAALMSRIQKLTKLILVSTKNS 513
Query: 452 GIKSTSTPSTPRAESINFRTESRLSQSLLTE---TSPSA--DLLSDARHDRGV--PEDSF 504
I + + SI+ + +L LL SPS+ L SDAR E+S
Sbjct: 514 -IPGYLGDTPAHSRSISAGKDDKLDSLLLDSDNLASPSSTLSLASDARRSSSKFKDENSP 572
Query: 505 LGQETPSTS-IKTIDQIDLLREQQKILAGEVALHSSALKRLSEEAARNPQKEQLQVEIKK 563
+G T + T D++DLL EQ K+LAGE+A +S LKRL +++ +P+ + Q++
Sbjct: 573 VGSRAELTQGVMTPDEMDLLVEQVKMLAGEIAFGTSTLKRLVDQSMNDPENSKTQIQ--N 630
Query: 564 LRDEIKGKNDQIALLEKQIADSIMTSHNTMDNSEVSQVKAADNRIIQEQLNQKICECEGL 623
L ++I+ K Q+ LE++I +S ++ N+ +++ R++ Q N+K E E +
Sbjct: 631 LENDIQEKQRQMKSLEQRITES---GEASIANASSIEMQEKVMRLMT-QCNEKSFELEII 686
Query: 624 QETIGFLKQQLNDALELRN--FSPLASYSQRFAEAKSLNGEHQIDKEIALLKDINEDSRL 681
L++QL N + QR + K+ + E + ++ + ++
Sbjct: 687 SADNRILQEQLQTKCTENNELHEKVHLLEQRLSSQKATLSCCDVVTE-EYVDELKK--KV 743
Query: 682 QVQAAEIEELNRKVTELTEAKEQLELRNQKLSEESSYAKGLASAAAVELKALSEEVAKLM 741
Q Q E E+L + + E K L ++NQKL+EE+SYAK LASAAA+ELK L++EV KL
Sbjct: 744 QSQEIENEKLKLEHVQSVEEKSGLRVQNQKLAEEASYAKELASAAAIELKNLADEVTKLS 803
Query: 742 NHKERLTAELAAAK--SSPTQRR------TSAVRNGRRDGQIKRQNQDGSSLD---LKRE 790
+L EL AA+ ++ Q+R ++A RNG R G+ K + D +L+ L E
Sbjct: 804 LQNAKLEKELVAARDLAAAAQKRNNNSMNSAANRNGTRPGR-KARISDSWNLNQENLTME 862
Query: 791 LALSREREVSYEAALLEKDQQEAELQRKVEESKKREAYLENELANMWVLVAKLKKSH 847
L ++RE EAAL EK+ E E ++K EE+K+RE LEN+LANMWVLVAKLKK++
Sbjct: 863 LQARKQREAVLEAALAEKEYIEEEFRKKAEEAKRREEALENDLANMWVLVAKLKKAN 919
|
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| TAIR|locus:2036987 AT1G21730 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2120187 AT4G39050 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2144103 AT5G06670 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0291039 kif11 "kinesin-7" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2202862 ZCF125 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|O42263 cenpe "Kinesin-related protein" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0285101 kif4 "kinesin-7" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| RGD|1307115 Cenpe "centromere protein E" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1098230 Cenpe "centromere protein E" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 861 | |||
| cd01374 | 321 | cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E | 1e-154 | |
| pfam00225 | 326 | pfam00225, Kinesin, Kinesin motor domain | 1e-118 | |
| smart00129 | 335 | smart00129, KISc, Kinesin motor, catalytic domain | 1e-106 | |
| cd00106 | 328 | cd00106, KISc, Kinesin motor domain | 1e-105 | |
| cd01369 | 325 | cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine | 4e-98 | |
| cd01371 | 333 | cd01371, KISc_KIF3, Kinesin motor domain, kinesins | 4e-87 | |
| cd01372 | 341 | cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik | 2e-86 | |
| cd01364 | 352 | cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC | 6e-82 | |
| cd01370 | 338 | cd01370, KISc_KIP3_like, Kinesin motor domain, KIP | 4e-79 | |
| cd01365 | 356 | cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K | 6e-76 | |
| cd01366 | 329 | cd01366, KISc_C_terminal, Kinesin motor domain, KI | 7e-74 | |
| cd01373 | 337 | cd01373, KISc_KLP2_like, Kinesin motor domain, KLP | 1e-71 | |
| cd01368 | 345 | cd01368, KISc_KIF23_like, Kinesin motor domain, KI | 1e-64 | |
| cd01367 | 322 | cd01367, KISc_KIF2_like, Kinesin motor domain, KIF | 1e-62 | |
| cd01376 | 319 | cd01376, KISc_KID_like, Kinesin motor domain, KIF2 | 3e-56 | |
| COG5059 | 568 | COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | 4e-56 | |
| cd01375 | 334 | cd01375, KISc_KIF9_like, Kinesin motor domain, KIF | 4e-55 | |
| PLN03188 | 1320 | PLN03188, PLN03188, kinesin-12 family protein; Pro | 2e-48 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 9e-30 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 3e-08 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 7e-08 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 7e-07 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 1e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 3e-05 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 9e-05 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 1e-04 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 1e-04 | |
| COG4942 | 420 | COG4942, COG4942, Membrane-bound metallopeptidase | 1e-04 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 2e-04 | |
| COG4942 | 420 | COG4942, COG4942, Membrane-bound metallopeptidase | 2e-04 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 3e-04 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 8e-04 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 0.001 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.001 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.001 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 0.001 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 0.002 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 0.002 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 0.002 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.002 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 0.004 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.004 | |
| TIGR04211 | 198 | TIGR04211, SH3_and_anchor, SH3 domain protein | 0.004 |
| >gnl|CDD|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
Score = 454 bits (1169), Expect = e-154
Identities = 182/323 (56%), Positives = 222/323 (68%), Gaps = 27/323 (8%)
Query: 68 NVTVTVRFRPLSPREIRQGEEIAWYADGE-TILRNEDNPSIAYAYDRVFGPTTTTRHVYD 126
+ V+VR RPL+PRE E++AW D + TI E P ++ +DRVFG +T R VY+
Sbjct: 1 KIKVSVRVRPLNPRES-DNEQVAWSIDNDNTISLEESTPGQSFTFDRVFGGESTNREVYE 59
Query: 127 IAAQHVVSGAMDGINGTIFAYGVTSSGKTHTMH----------------------TPNRE 164
A+ VV A++G NGTIFAYG TSSGKT TM TP+RE
Sbjct: 60 RIAKPVVRSALEGYNGTIFAYGQTSSGKTFTMSGDEQEPGIIPLAVRDIFQRIQDTPDRE 119
Query: 165 FLLRVSYLEIYNEVVNDLLNPAGQNLRIREDSQ-GTFVEGVKEEVVLSPAHALSLIAAGE 223
FLLRVSYLEIYNE + DLL+P+ Q LRIRED G V G+ EE+V SP H L LIA GE
Sbjct: 120 FLLRVSYLEIYNEKIKDLLSPSPQELRIREDPNKGVVVAGLTEEIVTSPEHLLQLIARGE 179
Query: 224 EHRHVGSTNFNLLSSRSHTIFTLTIESSPCGENSAGEAVNLSQLHLIDLAGSESSKAETT 283
++RHVG T+FN SSRSHTIF LTIES G +S V +S L+LIDLAGSE +
Sbjct: 180 KNRHVGETDFNERSSRSHTIFQLTIESRERG-DSESGTVRVSTLNLIDLAGSERASQTGA 238
Query: 284 GVRRKEGSYINKSLLTLGTVISKLTDGR-ATHIPYRDSKLTRLLQSSLSGHGRVSLICTV 342
G RRKEGS+INKSLLTLGTVISKL++G+ + HIPYRDSKLTR+LQ SLSG+ R ++ICT+
Sbjct: 239 GERRKEGSFINKSLLTLGTVISKLSEGKNSGHIPYRDSKLTRILQPSLSGNARTAIICTI 298
Query: 343 TPSSSSSEETHNTLKFAHRAKHI 365
+P+SS EET NTLKFA RAK +
Sbjct: 299 SPASSHVEETLNTLKFASRAKKV 321
|
This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 321 |
| >gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|238054 cd00106, KISc, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >gnl|CDD|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|227278 COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|227278 COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|234501 TIGR04211, SH3_and_anchor, SH3 domain protein | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 861 | |||
| KOG0245 | 1221 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0242 | 675 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG4280 | 574 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| PLN03188 | 1320 | kinesin-12 family protein; Provisional | 100.0 | |
| KOG0240 | 607 | consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | 100.0 | |
| cd01373 | 337 | KISc_KLP2_like Kinesin motor domain, KLP2-like sub | 100.0 | |
| cd01370 | 338 | KISc_KIP3_like Kinesin motor domain, KIP3-like sub | 100.0 | |
| KOG0241 | 1714 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01368 | 345 | KISc_KIF23_like Kinesin motor domain, KIF23-like s | 100.0 | |
| cd01365 | 356 | KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p | 100.0 | |
| cd01364 | 352 | KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind | 100.0 | |
| cd01369 | 325 | KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy | 100.0 | |
| cd01371 | 333 | KISc_KIF3 Kinesin motor domain, kinesins II or KIF | 100.0 | |
| cd01374 | 321 | KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like | 100.0 | |
| cd01367 | 322 | KISc_KIF2_like Kinesin motor domain, KIF2-like gro | 100.0 | |
| cd01376 | 319 | KISc_KID_like Kinesin motor domain, KIF22/Kid-like | 100.0 | |
| cd01372 | 341 | KISc_KIF4 Kinesin motor domain, KIF4-like subfamil | 100.0 | |
| cd01375 | 334 | KISc_KIF9_like Kinesin motor domain, KIF9-like sub | 100.0 | |
| cd01366 | 329 | KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ | 100.0 | |
| smart00129 | 335 | KISc Kinesin motor, catalytic domain. ATPase. Micr | 100.0 | |
| KOG0239 | 670 | consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | 100.0 | |
| cd00106 | 328 | KISc Kinesin motor domain. This catalytic (head) d | 100.0 | |
| KOG0246 | 676 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| PF00225 | 335 | Kinesin: Kinesin motor domain; InterPro: IPR001752 | 100.0 | |
| KOG0247 | 809 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0244 | 913 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 100.0 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 97.49 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 96.48 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 96.11 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 95.95 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 95.7 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 95.69 | |
| PRK09039 | 343 | hypothetical protein; Validated | 95.63 | |
| PRK11637 | 428 | AmiB activator; Provisional | 95.51 | |
| PRK11637 | 428 | AmiB activator; Provisional | 95.49 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 95.26 | |
| KOG0963 | 629 | consensus Transcription factor/CCAAT displacement | 95.11 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 94.92 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 94.83 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 94.7 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 94.55 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 94.06 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 94.01 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 93.9 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 93.69 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 93.66 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 93.02 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 92.98 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 92.93 | |
| PRK06893 | 229 | DNA replication initiation factor; Validated | 92.55 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 92.52 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 92.38 | |
| PF00308 | 219 | Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 | 92.29 | |
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 92.19 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 91.95 | |
| COG0556 | 663 | UvrB Helicase subunit of the DNA excision repair c | 91.84 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 91.56 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 91.39 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 91.06 | |
| PRK09039 | 343 | hypothetical protein; Validated | 90.67 | |
| PRK06620 | 214 | hypothetical protein; Validated | 90.52 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 90.47 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 89.8 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 89.7 | |
| COG2805 | 353 | PilT Tfp pilus assembly protein, pilus retraction | 89.6 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 89.52 | |
| COG2804 | 500 | PulE Type II secretory pathway, ATPase PulE/Tfp pi | 89.51 | |
| PF05701 | 522 | WEMBL: Weak chloroplast movement under blue light; | 89.14 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 89.1 | |
| PRK14088 | 440 | dnaA chromosomal replication initiation protein; P | 88.71 | |
| PRK14086 | 617 | dnaA chromosomal replication initiation protein; P | 88.57 | |
| PRK05642 | 234 | DNA replication initiation factor; Validated | 88.51 | |
| PRK09087 | 226 | hypothetical protein; Validated | 88.4 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 88.39 | |
| PRK06526 | 254 | transposase; Provisional | 88.12 | |
| PRK12377 | 248 | putative replication protein; Provisional | 87.92 | |
| PRK08116 | 268 | hypothetical protein; Validated | 87.19 | |
| PRK08084 | 235 | DNA replication initiation factor; Provisional | 87.19 | |
| PRK00149 | 450 | dnaA chromosomal replication initiation protein; R | 87.1 | |
| TIGR00362 | 405 | DnaA chromosomal replication initiator protein Dna | 86.94 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 86.87 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 86.8 | |
| TIGR02928 | 365 | orc1/cdc6 family replication initiation protein. M | 86.35 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 86.33 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 86.04 | |
| PRK00411 | 394 | cdc6 cell division control protein 6; Reviewed | 85.6 | |
| PRK07952 | 244 | DNA replication protein DnaC; Validated | 85.6 | |
| PF05483 | 786 | SCP-1: Synaptonemal complex protein 1 (SCP-1); Int | 85.52 | |
| PRK14087 | 450 | dnaA chromosomal replication initiation protein; P | 85.01 | |
| TIGR03420 | 226 | DnaA_homol_Hda DnaA regulatory inactivator Hda. Me | 84.93 | |
| cd00009 | 151 | AAA The AAA+ (ATPases Associated with a wide varie | 84.65 | |
| PRK08181 | 269 | transposase; Validated | 84.48 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 84.45 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 84.11 | |
| PF04851 | 184 | ResIII: Type III restriction enzyme, res subunit; | 84.04 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 84.01 | |
| PRK08727 | 233 | hypothetical protein; Validated | 83.81 | |
| KOG4360 | 596 | consensus Uncharacterized coiled coil protein [Fun | 83.63 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 83.62 | |
| PRK06835 | 329 | DNA replication protein DnaC; Validated | 83.61 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 83.38 | |
| TIGR02538 | 564 | type_IV_pilB type IV-A pilus assembly ATPase PilB. | 83.03 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 82.99 | |
| PF09738 | 302 | DUF2051: Double stranded RNA binding protein (DUF2 | 82.91 | |
| PRK08903 | 227 | DnaA regulatory inactivator Hda; Validated | 82.81 | |
| PTZ00112 | 1164 | origin recognition complex 1 protein; Provisional | 82.47 | |
| PF12325 | 120 | TMF_TATA_bd: TATA element modulatory factor 1 TATA | 82.12 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 82.05 | |
| PRK08939 | 306 | primosomal protein DnaI; Reviewed | 81.77 | |
| COG0593 | 408 | DnaA ATPase involved in DNA replication initiation | 81.08 | |
| TIGR02533 | 486 | type_II_gspE general secretory pathway protein E. | 80.94 |
| >KOG0245 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-85 Score=762.42 Aligned_cols=327 Identities=37% Similarity=0.558 Sum_probs=296.9
Q ss_pred CCCeEEEEecCCCChhhhccCCeEEEecCCCEE-EeCCC--CCceeEeeceecCCCC-------cchhHHHHHHHHHHHH
Q 002982 66 KENVTVTVRFRPLSPREIRQGEEIAWYADGETI-LRNED--NPSIAYAYDRVFGPTT-------TTRHVYDIAAQHVVSG 135 (861)
Q Consensus 66 ~~~VkV~VRVRPl~~~E~~~g~~~~~~~d~~~i-v~~~~--~~~~~F~FD~VF~~~a-------tQeeVY~~~~~plV~~ 135 (861)
..+|+|+||||||+.+|......+++.+.|.++ +.++. +....|+||++||..+ +|..||+.++.++|+.
T Consensus 3 ~ssv~VAVRVRPfn~rE~s~~~k~Vvqm~gn~ttii~~~~~k~~~~FtfD~SYWS~d~edPhfAsQ~qVYedlg~~mL~~ 82 (1221)
T KOG0245|consen 3 GSSVKVAVRVRPFNAREKSRDAKCVVQMQGNTTTIINPKGSKDAPKFTFDYSYWSHDSEDPHFASQKQVYEDLGREMLDH 82 (1221)
T ss_pred CCceEEEEEeccchhhhhhcccceEEEecCCceeeecCCCcccCCceecceeeecCCCCCCchhhHHHHHHHHhHHHHHH
Confidence 467999999999999999888888887777644 33332 2345699999998654 7999999999999999
Q ss_pred hhcCCCeeEEEecccCCCCccccccCC--------------------------ccceeeEEEEEEecceeeeccC-CC-C
Q 002982 136 AMDGINGTIFAYGVTSSGKTHTMHTPN--------------------------REFLLRVSYLEIYNEVVNDLLN-PA-G 187 (861)
Q Consensus 136 vl~GyN~tIfAYGqTGSGKTyTM~g~~--------------------------~~f~V~vSylEIYnE~I~DLL~-p~-~ 187 (861)
+|+|||+||||||||||||||||+|-. ..|.|.|||||||||+|+|||+ |. +
T Consensus 83 AfEGYN~ClFAYGQTGSGKSYTMMG~~~~~e~GIIPrlCEeLF~ri~~nq~~~~sy~VevSymEIYcErVrDLL~~p~~k 162 (1221)
T KOG0245|consen 83 AFEGYNVCLFAYGQTGSGKSYTMMGFQEPDEPGIIPRLCEELFSRIADNQSQQMSYSVEVSYMEIYCERVRDLLNAPKSK 162 (1221)
T ss_pred HhcccceEEEEeccCCCCcceeeeccCCCCCCCchhHHHHHHHHHHhhcccccceEEEEEeehhHHHHHHHHHhhCCCCC
Confidence 999999999999999999999998532 3599999999999999999999 54 4
Q ss_pred CCceeeeCC-CCeEEcccEEEEecCHHHHHHHHHHhHhccccccccCCCCCCCceEEEEEEEEeccCCCCCCCceeeeee
Q 002982 188 QNLRIREDS-QGTFVEGVKEEVVLSPAHALSLIAAGEEHRHVGSTNFNLLSSRSHTIFTLTIESSPCGENSAGEAVNLSQ 266 (861)
Q Consensus 188 ~~L~Ired~-~G~~V~gLse~~V~S~ee~~~lL~~G~~~R~~asT~~N~~SSRSH~IftI~Veq~~~~~~~~~~~~~~Sk 266 (861)
++|+|||+| .|+||++|+.+.|+|+.|+..||+.|++.|++++|+||+.|||||+||+|++.|.......+....++|+
T Consensus 163 g~LRVREHP~lGPYVedLS~~aV~Sy~dI~~~md~GNkqRTtAATnMNdtSSRSHaVFtIvftQk~~~~~~~l~sek~SK 242 (1221)
T KOG0245|consen 163 GGLRVREHPILGPYVEDLSKLAVTSYADIQDLMDEGNKQRTTAATNMNDTSSRSHAVFTIVFTQKKHDQDTGLDSEKVSK 242 (1221)
T ss_pred CCceeeccCccChhHhHhhhcccccHHHHHHHHHhcchhhhhhhhccccccccceeEEEEEEEeeeccccCCCcceeeee
Confidence 689999999 6999999999999999999999999999999999999999999999999999999877776667889999
Q ss_pred eeeeecCCCCC-ccccccchhhhhhhhcccchHHHHHHHHHHhc------CCCCcccCCCCchhhhhhccCCCCccceeE
Q 002982 267 LHLIDLAGSES-SKAETTGVRRKEGSYINKSLLTLGTVISKLTD------GRATHIPYRDSKLTRLLQSSLSGHGRVSLI 339 (861)
Q Consensus 267 L~LVDLAGSEr-~kt~~~G~rlkEg~~INkSL~aLg~VI~ALs~------~k~~hIPYRDSKLTrLLqdSLGGNskT~mI 339 (861)
|+||||||||| +.+++.|+|+|||.+|||||+|||+||+||++ +++.+||||||.|||||+++|||||||+||
T Consensus 243 IsLVDLAGSERasstGa~G~RLKEGa~INKSLtTLGkVISALAe~~~~k~~ks~fIPYRDSVLTWLLkEnLGGNSKTaMI 322 (1221)
T KOG0245|consen 243 ISLVDLAGSERASSTGANGDRLKEGANINKSLTTLGKVISALAESQKGKKKKSDFIPYRDSVLTWLLKENLGGNSKTAMI 322 (1221)
T ss_pred eeEEeccCcccccccCCCccchhcccccchHHHHHHHHHHHHHHHhccCCCCCccccchHHHHHHHHHHhcCCcchhhhh
Confidence 99999999999 67899999999999999999999999999987 234699999999999999999999999999
Q ss_pred EeeCCCCCChHHHHHHHHHHHHccccccccccccccchHHHHHHHHHHHHHHHHH
Q 002982 340 CTVTPSSSSSEETHNTLKFAHRAKHIEILAAQNKLEDGQVKLQSRLEEEEDAKSA 394 (861)
Q Consensus 340 a~ISPs~~~~eETLsTLrFAsRAk~Ikn~~~~N~l~~~~~~l~~~Le~ee~~~~~ 394 (861)
|+|||++.||+|||+|||||+|||.|+|.|++| +|.+++|+++|++|....+.
T Consensus 323 AAlSPAdiNyeETLSTLRYAdRAK~Iv~~avVN--EdpnaKLIRELreEv~rLks 375 (1221)
T KOG0245|consen 323 AALSPADINYEETLSTLRYADRAKQIVNNAVVN--EDPNAKLIRELREEVARLKS 375 (1221)
T ss_pred hccChhhcChHHHHHHHHHhhHhhhhhccceeC--CCccHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 78999999999988654433
|
|
| >KOG0242 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG4280 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PLN03188 kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >KOG0241 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >smart00129 KISc Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd00106 KISc Kinesin motor domain | Back alignment and domain information |
|---|
| >KOG0246 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport | Back alignment and domain information |
|---|
| >KOG0247 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0244 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription] | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >PRK06893 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >COG0556 UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK06620 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >PRK14088 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >PRK14086 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >PRK05642 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >PRK09087 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK06526 transposase; Provisional | Back alignment and domain information |
|---|
| >PRK12377 putative replication protein; Provisional | Back alignment and domain information |
|---|
| >PRK08116 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK08084 DNA replication initiation factor; Provisional | Back alignment and domain information |
|---|
| >PRK00149 dnaA chromosomal replication initiation protein; Reviewed | Back alignment and domain information |
|---|
| >TIGR00362 DnaA chromosomal replication initiator protein DnaA | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR02928 orc1/cdc6 family replication initiation protein | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PRK00411 cdc6 cell division control protein 6; Reviewed | Back alignment and domain information |
|---|
| >PRK07952 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex | Back alignment and domain information |
|---|
| >PRK14087 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda | Back alignment and domain information |
|---|
| >cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold | Back alignment and domain information |
|---|
| >PRK08181 transposase; Validated | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >PF04851 ResIII: Type III restriction enzyme, res subunit; InterPro: IPR006935 This entry represents a domain found in the N terminus of several proteins, including helicases, the R subunit (HsdR) of type I restriction endonucleases (3 | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PRK08727 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK06835 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >TIGR02538 type_IV_pilB type IV-A pilus assembly ATPase PilB | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF09738 DUF2051: Double stranded RNA binding protein (DUF2051); InterPro: IPR019139 This entry represents transcriptional repressors which preferentially bind to the GC-rich consensus sequence (5'-AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA | Back alignment and domain information |
|---|
| >PRK08903 DnaA regulatory inactivator Hda; Validated | Back alignment and domain information |
|---|
| >PTZ00112 origin recognition complex 1 protein; Provisional | Back alignment and domain information |
|---|
| >PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >PRK08939 primosomal protein DnaI; Reviewed | Back alignment and domain information |
|---|
| >COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >TIGR02533 type_II_gspE general secretory pathway protein E | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 861 | ||||
| 1t5c_A | 349 | Crystal Structure Of The Motor Domain Of Human Kine | 1e-62 | ||
| 1mkj_A | 349 | Human Kinesin Motor Domain With Docked Neck Linker | 5e-57 | ||
| 1bg2_A | 325 | Human Ubiquitous Kinesin Motor Domain Length = 325 | 7e-57 | ||
| 4atx_C | 340 | Rigor Kinesin Motor Domain With An Ordered Neck-Lin | 9e-57 | ||
| 2y5w_A | 365 | Crystal Structure Of Drosophila Melanogaster Kinesi | 7e-55 | ||
| 1goj_A | 355 | Structure Of A Fast Kinesin: Implications For Atpas | 1e-51 | ||
| 2wbe_C | 373 | Kinesin-5-Tubulin Complex With Amppnp Length = 373 | 1e-49 | ||
| 2vvg_A | 350 | Crystal Structure Of The G.Intestinalis Kinesin 2 G | 2e-48 | ||
| 3b6u_A | 372 | Crystal Structure Of The Motor Domain Of Human Kine | 3e-48 | ||
| 3gbj_A | 354 | Crystal Structure Of The Motor Domain Of Kinesin Ki | 6e-46 | ||
| 4a14_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 6e-45 | ||
| 3b6v_A | 395 | Crystal Structure Of The Motor Domain Of Human Kine | 7e-45 | ||
| 2xt3_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 1e-43 | ||
| 4aqv_C | 373 | Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma | 3e-43 | ||
| 1q0b_A | 367 | Crystal Structure Of The Motor Protein Ksp In Compl | 8e-43 | ||
| 1ii6_A | 368 | Crystal Structure Of The Mitotic Kinesin Eg5 In Com | 8e-43 | ||
| 3hqd_A | 369 | Human Kinesin Eg5 Motor Domain In Complex With Ampp | 8e-43 | ||
| 4a28_A | 368 | Eg5-2 Length = 368 | 9e-43 | ||
| 4ap0_A | 370 | The Mitotic Kinesin Eg5 In Complex With Mg-Adp And | 9e-43 | ||
| 4a1z_A | 368 | Eg5-1 Length = 368 | 1e-42 | ||
| 1x88_A | 359 | Human Eg5 Motor Domain Bound To Mg-Adp And Monastro | 1e-42 | ||
| 3zcw_A | 348 | Eg5 - New Allosteric Binding Site Length = 348 | 3e-42 | ||
| 3lre_A | 355 | Crystal Structure Analysis Of Human Kinesin-8 Motor | 4e-42 | ||
| 2h58_A | 330 | Crystal Structure Of The Kifc3 Motor Domain In Comp | 3e-38 | ||
| 1ia0_K | 394 | Kif1a Head-Microtubule Complex Structure In Atp-For | 6e-38 | ||
| 1i5s_A | 367 | Crystal Structure Of The Kif1a Motor Domain Complex | 7e-38 | ||
| 1sdm_A | 369 | Crystal Structure Of Kinesin-Like Calmodulin Bindin | 8e-38 | ||
| 1i6i_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 2e-37 | ||
| 1vfv_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 2e-37 | ||
| 3h4s_A | 386 | Structure Of The Complex Of A Mitotic Kinesin With | 5e-37 | ||
| 3bfn_A | 388 | Crystal Structure Of The Motor Domain Of Human Kine | 5e-37 | ||
| 2owm_A | 443 | Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3 | 5e-36 | ||
| 3nwn_A | 359 | Crystal Structure Of The Human Kif9 Motor Domain In | 2e-35 | ||
| 2kin_A | 238 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 2e-34 | ||
| 3u06_A | 412 | Crystal Structure Of The Kinesin-14 Ncdg347d Length | 3e-34 | ||
| 2ncd_A | 420 | Ncd (Non-Claret Disjunctional) Dimer From D. Melano | 6e-34 | ||
| 1cz7_A | 406 | The Crystal Structure Of A Minus-End Directed Micro | 8e-34 | ||
| 4h1g_A | 715 | Structure Of Candida Albicans Kar3 Motor Domain Fus | 3e-33 | ||
| 3l1c_A | 383 | Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | 3e-33 | ||
| 1n6m_A | 409 | Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY | 5e-33 | ||
| 1v8j_A | 410 | The Crystal Structure Of The Minimal Functional Dom | 7e-32 | ||
| 4gkr_A | 371 | Structure Of The C-Terminal Motor Domain Of Kar3 Fr | 4e-31 | ||
| 3edl_D | 331 | Kinesin13-Microtubule Ring Complex Length = 331 | 8e-31 | ||
| 2heh_A | 387 | Crystal Structure Of The Kif2c Motor Domain (Casp T | 1e-30 | ||
| 3t0q_A | 349 | Motor Domain Structure Of The Kar3-Like Kinesin Fro | 2e-30 | ||
| 2gry_A | 420 | Crystal Structure Of The Human Kif2 Motor Domain In | 1e-28 | ||
| 2rep_A | 376 | Crystal Structure Of The Motor Domain Of Human Kine | 2e-27 | ||
| 4etp_A | 403 | C-Terminal Motor And Motor Homology Domain Of Kar3v | 8e-27 | ||
| 1f9t_A | 358 | Crystal Structures Of Kinesin Mutants Reveal A Sign | 3e-26 | ||
| 3kar_A | 346 | The Motor Domain Of Kinesin-Like Protein Kar3, A Sa | 3e-26 | ||
| 1f9w_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 2e-25 | ||
| 1f9u_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 2e-25 | ||
| 1f9v_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 3e-25 | ||
| 3pxn_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 5e-22 | ||
| 3dc4_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 7e-22 | ||
| 1ry6_A | 360 | Crystal Structure Of Internal Kinesin Motor Domain | 2e-19 | ||
| 2kin_B | 100 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 1e-14 | ||
| 3kin_B | 117 | Kinesin (Dimeric) From Rattus Norvegicus Length = 1 | 5e-14 |
| >pdb|1T5C|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinetochore Protein Cenp-E Length = 349 | Back alignment and structure |
|
| >pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349 | Back alignment and structure |
| >pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325 | Back alignment and structure |
| >pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340 | Back alignment and structure |
| >pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365 | Back alignment and structure |
| >pdb|1GOJ|A Chain A, Structure Of A Fast Kinesin: Implications For Atpase Mechanism And Interactions With Microtubules Length = 355 | Back alignment and structure |
| >pdb|2WBE|C Chain C, Kinesin-5-Tubulin Complex With Amppnp Length = 373 | Back alignment and structure |
| >pdb|2VVG|A Chain A, Crystal Structure Of The G.Intestinalis Kinesin 2 Gikin2a Motor Domain Length = 350 | Back alignment and structure |
| >pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3b In Complex With Adp Length = 372 | Back alignment and structure |
| >pdb|3GBJ|A Chain A, Crystal Structure Of The Motor Domain Of Kinesin Kif13b Bound With Adp Length = 354 | Back alignment and structure |
| >pdb|4A14|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395 | Back alignment and structure |
| >pdb|2XT3|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain In The Ampppnp State. Length = 373 | Back alignment and structure |
| >pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With Adp And Monastrol Length = 367 | Back alignment and structure |
| >pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex With Mg-Adp. Length = 368 | Back alignment and structure |
| >pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And Mg2+ Length = 369 | Back alignment and structure |
| >pdb|4A28|A Chain A, Eg5-2 Length = 368 | Back alignment and structure |
| >pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And Ispinesib Length = 370 | Back alignment and structure |
| >pdb|4A1Z|A Chain A, Eg5-1 Length = 368 | Back alignment and structure |
| >pdb|1X88|A Chain A, Human Eg5 Motor Domain Bound To Mg-Adp And Monastrol Length = 359 | Back alignment and structure |
| >pdb|3ZCW|A Chain A, Eg5 - New Allosteric Binding Site Length = 348 | Back alignment and structure |
| >pdb|3LRE|A Chain A, Crystal Structure Analysis Of Human Kinesin-8 Motor Domain Length = 355 | Back alignment and structure |
| >pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330 | Back alignment and structure |
| >pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form Length = 394 | Back alignment and structure |
| >pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Adp Length = 367 | Back alignment and structure |
| >pdb|1SDM|A Chain A, Crystal Structure Of Kinesin-Like Calmodulin Binding Protein Length = 369 | Back alignment and structure |
| >pdb|1I6I|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppcp Length = 366 | Back alignment and structure |
| >pdb|1VFV|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppnp Length = 366 | Back alignment and structure |
| >pdb|3H4S|A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator Length = 386 | Back alignment and structure |
| >pdb|3BFN|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 22 Length = 388 | Back alignment and structure |
| >pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3) Length = 443 | Back alignment and structure |
| >pdb|3NWN|A Chain A, Crystal Structure Of The Human Kif9 Motor Domain In Complex With Adp Length = 359 | Back alignment and structure |
| >pdb|2KIN|A Chain A, Kinesin (Monomeric) From Rattus Norvegicus Length = 238 | Back alignment and structure |
| >pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d Length = 412 | Back alignment and structure |
| >pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster Length = 420 | Back alignment and structure |
| >pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations Length = 406 | Back alignment and structure |
| >pdb|4H1G|A Chain A, Structure Of Candida Albicans Kar3 Motor Domain Fused To Maltose- Binding Protein Length = 715 | Back alignment and structure |
| >pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | Back alignment and structure |
| >pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL Structure Of The Kinesin Motor Protein, Ncd Length = 409 | Back alignment and structure |
| >pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2c Complexed With Mg-adp Length = 410 | Back alignment and structure |
| >pdb|4GKR|A Chain A, Structure Of The C-Terminal Motor Domain Of Kar3 From Candida Glabrata Length = 371 | Back alignment and structure |
| >pdb|3EDL|D Chain D, Kinesin13-Microtubule Ring Complex Length = 331 | Back alignment and structure |
| >pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target) Length = 387 | Back alignment and structure |
| >pdb|3T0Q|A Chain A, Motor Domain Structure Of The Kar3-Like Kinesin From Ashbya Gossypii Length = 349 | Back alignment and structure |
| >pdb|2GRY|A Chain A, Crystal Structure Of The Human Kif2 Motor Domain In Complex With Adp Length = 420 | Back alignment and structure |
| >pdb|2REP|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member C1 Length = 376 | Back alignment and structure |
| >pdb|4ETP|A Chain A, C-Terminal Motor And Motor Homology Domain Of Kar3vik1 Fused To A Synthetic Heterodimeric Coiled Coil Length = 403 | Back alignment and structure |
| >pdb|1F9T|A Chain A, Crystal Structures Of Kinesin Mutants Reveal A Signalling Pathway For Activation Of The Motor Atpase Length = 358 | Back alignment and structure |
| >pdb|3KAR|A Chain A, The Motor Domain Of Kinesin-Like Protein Kar3, A Saccharomyces Cerevisiae Kinesin-Related Protein Length = 346 | Back alignment and structure |
| >pdb|1F9W|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9U|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9V|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|3PXN|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Kin10NOD IN Complex With Divalent Manganese And Adp Length = 344 | Back alignment and structure |
| >pdb|3DC4|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Nod In Complex With Adp Length = 344 | Back alignment and structure |
| >pdb|1RY6|A Chain A, Crystal Structure Of Internal Kinesin Motor Domain Length = 360 | Back alignment and structure |
| >pdb|2KIN|B Chain B, Kinesin (Monomeric) From Rattus Norvegicus Length = 100 | Back alignment and structure |
| >pdb|3KIN|B Chain B, Kinesin (Dimeric) From Rattus Norvegicus Length = 117 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 443 bits (1141), Expect = e-150
Identities = 149/353 (42%), Positives = 202/353 (57%), Gaps = 32/353 (9%)
Query: 64 SSKENVTVTVRFRPLSPREIRQGEEIAWYADGETILRNEDNPSIAYAYDRVFGPTTTTRH 123
+ + V V VR RPL+ RE GE Y + + + + S ++ +DRVF TT++
Sbjct: 1 AEEGAVAVCVRVRPLNSREESLGETAQVYWKTDNNVIYQVDGSKSFNFDRVFHGNETTKN 60
Query: 124 VYDIAAQHVVSGAMDGINGTIFAYGVTSSGKTHTMH----------------------TP 161
VY+ A ++ A+ G NGTIFAYG T+SGKT+TM P
Sbjct: 61 VYEEIAAPIIDSAIQGYNGTIFAYGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFP 120
Query: 162 NREFLLRVSYLEIYNEVVNDLLNPA--GQNLRIRED-SQGTFVEGVKEEVVLSPAHALSL 218
+REFLLRVSY+EIYNE + DLL + L IRED ++ +V + EEVV + AL
Sbjct: 121 DREFLLRVSYMEIYNETITDLLCGTQKMKPLIIREDVNRNVYVADLTEEVVYTSEMALKW 180
Query: 219 IAAGEEHRHVGSTNFNLLSSRSHTIFTLTIESSPCGENSAGE-AVNLSQLHLIDLAGSE- 276
I GE+ RH G T N SSRSHTIF + +ES GE S E +V +S L+L+DLAGSE
Sbjct: 181 ITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNCEGSVKVSHLNLVDLAGSER 240
Query: 277 SSKAETTGVRRKEGSYINKSLLTLGTVISKLTDGR-ATHIPYRDSKLTRLLQSSLSGHGR 335
+++ GVR KEG IN+SL LG VI KL+DG+ I YRDSKLTR+LQ+SL G+ +
Sbjct: 241 AAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAK 300
Query: 336 VSLICTVTPSSSSSEETHNTLKFAHRAKHIEILAAQNKLEDGQVKLQSRLEEE 388
+ICT+TP S +ET L+FA AK+++ N E +L+
Sbjct: 301 TRIICTITP--VSFDETLTALQFASTAKYMKNTPYVN--EVSTDELEHHHHHH 349
|
| >2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365 | Back alignment and structure |
|---|
| >1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325 | Back alignment and structure |
|---|
| >1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355 | Back alignment and structure |
|---|
| >3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372 | Back alignment and structure |
|---|
| >4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344 | Back alignment and structure |
|---|
| >3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388 | Back alignment and structure |
|---|
| >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373 | Back alignment and structure |
|---|
| >2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350 | Back alignment and structure |
|---|
| >1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359 | Back alignment and structure |
|---|
| >2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366 | Back alignment and structure |
|---|
| >3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355 | Back alignment and structure |
|---|
| >3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354 | Back alignment and structure |
|---|
| >3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369 | Back alignment and structure |
|---|
| >2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330 | Back alignment and structure |
|---|
| >1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347 | Back alignment and structure |
|---|
| >3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344 | Back alignment and structure |
|---|
| >4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403 | Back alignment and structure |
|---|
| >2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443 | Back alignment and structure |
|---|
| >3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349 | Back alignment and structure |
|---|
| >3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412 | Back alignment and structure |
|---|
| >1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360 | Back alignment and structure |
|---|
| >2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387 | Back alignment and structure |
|---|
| >2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376 | Back alignment and structure |
|---|
| >1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410 | Back alignment and structure |
|---|
| >3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117 | Back alignment and structure |
|---|
| >2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 861 | |||
| 1goj_A | 355 | Kinesin, kinesin heavy chain; motor protein, ATPas | 100.0 | |
| 2y65_A | 365 | Kinesin, kinesin heavy chain; motor protein; HET: | 100.0 | |
| 2owm_A | 443 | Nckin3-434, related to kinesin-like protein KIF1C; | 100.0 | |
| 3b6u_A | 372 | Kinesin-like protein KIF3B; structural genomics co | 100.0 | |
| 2zfi_A | 366 | Kinesin-like protein KIF1A, kinesin heavy chain is | 100.0 | |
| 3cob_A | 369 | Kinesin heavy chain-like protein; motor, switch II | 100.0 | |
| 2vvg_A | 350 | Kinesin-2; motor protein, nucleotide-binding, micr | 100.0 | |
| 3bfn_A | 388 | Kinesin-like protein KIF22; limited proteolysis, s | 100.0 | |
| 1t5c_A | 349 | CENP-E protein, centromeric protein E; kinesin mot | 100.0 | |
| 1x88_A | 359 | Kinesin-like protein KIF11; switch II, motor domai | 100.0 | |
| 3lre_A | 355 | Kinesin-like protein KIF18A; motor protein, nucleo | 100.0 | |
| 1bg2_A | 325 | Kinesin; motor protein, ATPase, microtubule associ | 100.0 | |
| 2wbe_C | 373 | Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit | 100.0 | |
| 3gbj_A | 354 | KIF13B protein; kinesin, motor domain, ADP, struct | 100.0 | |
| 4a14_A | 344 | Kinesin, kinesin-like protein KIF7; motor protein, | 100.0 | |
| 3nwn_A | 359 | Kinesin-like protein KIF9; motor domain, ADP, stru | 100.0 | |
| 3t0q_A | 349 | AGR253WP; kinesin, alpha and beta proteins, P-loop | 100.0 | |
| 2h58_A | 330 | Kinesin-like protein KIFC3 variant; motor domain, | 100.0 | |
| 2nr8_A | 358 | Kinesin-like protein KIF9; motor domain, ADP, stru | 100.0 | |
| 2rep_A | 376 | Kinesin-like protein KIFC1; structural genomics co | 100.0 | |
| 2heh_A | 387 | KIF2C protein; kinesin, motor domain, ADP, structu | 100.0 | |
| 1f9v_A | 347 | Kinesin-like protein KAR3; kinesin-related protein | 100.0 | |
| 1v8k_A | 410 | Kinesin-like protein KIF2C; microtubule destabiliz | 100.0 | |
| 1ry6_A | 360 | Internal kinesin; kinesin motor domain, nucleotide | 100.0 | |
| 4etp_A | 403 | Kinesin-like protein KAR3; kinesin motor protein, | 100.0 | |
| 3u06_A | 412 | Protein claret segregational; motor domain, stalk | 100.0 | |
| 3dc4_A | 344 | Kinesin-like protein NOD; catalytic domain, ATPase | 100.0 | |
| 4h1g_A | 715 | Maltose binding protein-cakar3 motor domain fusio; | 100.0 | |
| 2kin_B | 100 | Kinesin; motor protein, cytoskeleton; HET: ADP; 2. | 99.95 | |
| 3kin_B | 117 | Kinesin heavy chain; motor protein, cytoskeleton; | 99.95 | |
| 2o0a_A | 298 | S.cerevisiae chromosome XVI reading frame ORF YPL2 | 99.89 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 95.74 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 95.0 | |
| 2dfs_A | 1080 | Myosin-5A; myosin-V, inhibited state, cryoelectron | 94.54 | |
| 2dfs_A | 1080 | Myosin-5A; myosin-V, inhibited state, cryoelectron | 94.13 | |
| 1c1g_A | 284 | Tropomyosin; contractIle protein; 7.00A {Sus scrof | 93.52 | |
| 3ec2_A | 180 | DNA replication protein DNAC; helicase loader, rep | 93.52 | |
| 2w58_A | 202 | DNAI, primosome component (helicase loader); ATP-b | 92.56 | |
| 2qgz_A | 308 | Helicase loader, putative primosome component; str | 91.38 | |
| 3na7_A | 256 | HP0958; flagellar biogenesis, flagellum export, C4 | 89.16 | |
| 3t15_A | 293 | Ribulose bisphosphate carboxylase/oxygenase activ | 88.25 | |
| 1c1g_A | 284 | Tropomyosin; contractIle protein; 7.00A {Sus scrof | 87.94 | |
| 1jbk_A | 195 | CLPB protein; beta barrel, chaperone; 1.80A {Esche | 85.46 | |
| 2bjv_A | 265 | PSP operon transcriptional activator; AAA, transcr | 85.29 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 83.68 | |
| 3vfd_A | 389 | Spastin; ATPase, microtubule severing, hydrolase; | 83.61 | |
| 1l8q_A | 324 | Chromosomal replication initiator protein DNAA; AA | 83.53 | |
| 2p65_A | 187 | Hypothetical protein PF08_0063; CLPB, malaria, str | 83.53 | |
| 2r62_A | 268 | Cell division protease FTSH homolog; ATPase domain | 83.52 | |
| 3h4m_A | 285 | Proteasome-activating nucleotidase; ATPase, PAN, A | 82.22 | |
| 1g8p_A | 350 | Magnesium-chelatase 38 kDa subunit; parallel beta | 81.9 | |
| 3te6_A | 318 | Regulatory protein SIR3; heterochromatin, gene sil | 81.7 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 81.43 | |
| 1ixz_A | 254 | ATP-dependent metalloprotease FTSH; AAA domain fol | 81.35 | |
| 3cf0_A | 301 | Transitional endoplasmic reticulum ATPase; AAA, P9 | 81.23 | |
| 4etp_B | 333 | Spindle POLE BODY-associated protein VIK1; kinesin | 81.12 | |
| 3a7o_A | 75 | Autophagy protein 16; coiled-coil, coiled coil, cy | 80.74 | |
| 3bos_A | 242 | Putative DNA replication factor; P-loop containing | 80.24 |
| >1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-83 Score=707.01 Aligned_cols=307 Identities=40% Similarity=0.617 Sum_probs=281.6
Q ss_pred CCCCeEEEEecCCCChhhhccCCeE-EEecCCCEEEeCCCCCceeEeeceecCCCCcchhHHHHHHHHHHHHhhcCCCee
Q 002982 65 SKENVTVTVRFRPLSPREIRQGEEI-AWYADGETILRNEDNPSIAYAYDRVFGPTTTTRHVYDIAAQHVVSGAMDGINGT 143 (861)
Q Consensus 65 ~~~~VkV~VRVRPl~~~E~~~g~~~-~~~~d~~~iv~~~~~~~~~F~FD~VF~~~atQeeVY~~~~~plV~~vl~GyN~t 143 (861)
+.++|+|+|||||++..|...+... +...++..+..........|.||+||+++++|++||+.++.|+|+++|+|||+|
T Consensus 4 ~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~t 83 (355)
T 1goj_A 4 SANSIKVVARFRPQNRVEIESGGQPIVTFQGPDTCTVDSKEAQGSFTFDRVFDMSCKQSDIFDFSIKPTVDDILNGYNGT 83 (355)
T ss_dssp SSCBCEEEEEECCCCHHHHTTTCCBCEEECSTTEEEECSTTCCEEEECSEEECTTCCHHHHHHHHTHHHHHHHTTTCCEE
T ss_pred CCCCeEEEEECCCCChHHhhcCCceEEEEcCCCeEEEccCCCccEEeeCeEECCCCccHHHHHHHHHHHHHHHhCCCcce
Confidence 3689999999999999998877654 344455566665555678999999999999999999999999999999999999
Q ss_pred EEEecccCCCCccccccCC---------------------------ccceeeEEEEEEecceeeeccCCCCCCceeeeCC
Q 002982 144 IFAYGVTSSGKTHTMHTPN---------------------------REFLLRVSYLEIYNEVVNDLLNPAGQNLRIREDS 196 (861)
Q Consensus 144 IfAYGqTGSGKTyTM~g~~---------------------------~~f~V~vSylEIYnE~I~DLL~p~~~~L~Ired~ 196 (861)
|||||||||||||||+|+. .+|.|+|||+|||||+|+|||++....+.|++++
T Consensus 84 ifAYGqTGSGKTyTm~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~l~i~e~~ 163 (355)
T 1goj_A 84 VFAYGQTGAGKSYTMMGTSIDDPDGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQNDNLPVHEEK 163 (355)
T ss_dssp EEEECSTTSSHHHHHTBSCTTSTTTBCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSTTCCSCCEEEET
T ss_pred EEEECCCCCCcceEeecCCCCCcccCCchHHHHHHHHHHHHhcccCceEEEEEEEEEEECCEEEEcccCccCCceeEEcC
Confidence 9999999999999998742 2589999999999999999999998899999998
Q ss_pred C-CeEEcccEEEEecCHHHHHHHHHHhHhccccccccCCCCCCCceEEEEEEEEeccCCCCCCCceeeeeeeeeeecCCC
Q 002982 197 Q-GTFVEGVKEEVVLSPAHALSLIAAGEEHRHVGSTNFNLLSSRSHTIFTLTIESSPCGENSAGEAVNLSQLHLIDLAGS 275 (861)
Q Consensus 197 ~-G~~V~gLse~~V~S~ee~~~lL~~G~~~R~~asT~~N~~SSRSH~IftI~Veq~~~~~~~~~~~~~~SkL~LVDLAGS 275 (861)
. |+||.|++++.|.+++|++.+|..|.++|++++|.||..|||||+||+|+|++.... ......|+|+|||||||
T Consensus 164 ~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~----~~~~~~skL~lVDLAGS 239 (355)
T 1goj_A 164 NRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVE----TGSAKSGQLFLVDLAGS 239 (355)
T ss_dssp TTEEEETTCCCEECCSHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEEEEEEEETT----TTEEEEEEEEEEECCCC
T ss_pred CCCEeecCCEEEeCCCHHHHHHHHHHHHhhcCcccccCCCCCCCceEEEEEEEEEeccC----CCceeeeEEEEEECCCC
Confidence 5 699999999999999999999999999999999999999999999999999986432 23567899999999999
Q ss_pred CC-ccccccchhhhhhhhcccchHHHHHHHHHHhcCCCCcccCCCCchhhhhhccCCCCccceeEEeeCCCCCChHHHHH
Q 002982 276 ES-SKAETTGVRRKEGSYINKSLLTLGTVISKLTDGRATHIPYRDSKLTRLLQSSLSGHGRVSLICTVTPSSSSSEETHN 354 (861)
Q Consensus 276 Er-~kt~~~G~rlkEg~~INkSL~aLg~VI~ALs~~k~~hIPYRDSKLTrLLqdSLGGNskT~mIa~ISPs~~~~eETLs 354 (861)
|| .++++.|.|++|+.+||+||++||+||.+|++++..|||||||||||||||+||||++|+|||||||+..+++||++
T Consensus 240 Er~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGns~t~mI~~isP~~~~~~ETl~ 319 (355)
T 1goj_A 240 EKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETLS 319 (355)
T ss_dssp SCCTTSSSCCCCTTTTGGGTSHHHHHHHHHHHHHHCSCSCCCGGGCHHHHHTGGGTTSSCEEEEEEEECCBGGGHHHHHH
T ss_pred CcccccccchhhHHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCccCHHHHHHHHHhCCCCcEEEEEEECcccccHHHHHH
Confidence 99 57889999999999999999999999999999888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHcccccccccccccc
Q 002982 355 TLKFAHRAKHIEILAAQNKLE 375 (861)
Q Consensus 355 TLrFAsRAk~Ikn~~~~N~l~ 375 (861)
||+||+|||+|+|.|++|...
T Consensus 320 TL~fA~rak~I~n~~~vn~~~ 340 (355)
T 1goj_A 320 TLRFGMRAKSIKNKAKVNAEL 340 (355)
T ss_dssp HHHHHHHHHTCBCCCCCCSSS
T ss_pred HHHHHHHHhhccCCceeCCCC
Confidence 999999999999999999743
|
| >2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* | Back alignment and structure |
|---|
| >2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} | Back alignment and structure |
|---|
| >3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* | Back alignment and structure |
|---|
| >2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* | Back alignment and structure |
|---|
| >3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* | Back alignment and structure |
|---|
| >2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} | Back alignment and structure |
|---|
| >3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... | Back alignment and structure |
|---|
| >3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0 | Back alignment and structure |
|---|
| >1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* | Back alignment and structure |
|---|
| >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A* | Back alignment and structure |
|---|
| >3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} | Back alignment and structure |
|---|
| >2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
| >2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* | Back alignment and structure |
|---|
| >1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* | Back alignment and structure |
|---|
| >1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* | Back alignment and structure |
|---|
| >1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* | Back alignment and structure |
|---|
| >3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* | Back alignment and structure |
|---|
| >4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli} | Back alignment and structure |
|---|
| >2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A | Back alignment and structure |
|---|
| >3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A* | Back alignment and structure |
|---|
| >2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426} | Back alignment and structure |
|---|
| >2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3} | Back alignment and structure |
|---|
| >3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori} | Back alignment and structure |
|---|
| >3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A | Back alignment and structure |
|---|
| >1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20 | Back alignment and structure |
|---|
| >2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A* | Back alignment and structure |
|---|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
| >3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens} | Back alignment and structure |
|---|
| >1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A* | Back alignment and structure |
|---|
| >2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A* | Back alignment and structure |
|---|
| >3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G | Back alignment and structure |
|---|
| >3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
| >1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A* | Back alignment and structure |
|---|
| >3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus} | Back alignment and structure |
|---|
| >4etp_B Spindle POLE BODY-associated protein VIK1; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3a7o_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 861 | ||||
| d1bg2a_ | 323 | c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId | 4e-75 | |
| d1goja_ | 354 | c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5 | 2e-74 | |
| d2zfia1 | 349 | c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), | 6e-69 | |
| d1x88a1 | 345 | c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), | 3e-68 | |
| d1ry6a_ | 330 | c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu | 5e-68 | |
| d1v8ka_ | 362 | c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c | 4e-65 | |
| d1f9va_ | 342 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 2e-61 | |
| d1sdma_ | 364 | c.37.1.9 (A:) Kinesin heavy chain-like protein {Po | 3e-57 | |
| d2ncda_ | 368 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 2e-56 |
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin species: Human (Homo sapiens) [TaxId: 9606]
Score = 246 bits (628), Expect = 4e-75
Identities = 132/329 (40%), Positives = 184/329 (55%), Gaps = 36/329 (10%)
Query: 65 SKENVTVTVRFRPLSPREIRQGEEIAWYADGETILRNEDNPSIAYAYDRVFGPTTTTRHV 124
++ N+ V RFRPL+ E+ +G++ GE + P YA+DRVF +T+ V
Sbjct: 3 AECNIKVMCRFRPLNESEVNRGDKYIAKFQGEDTVVIASKP---YAFDRVFQSSTSQEQV 59
Query: 125 YDIAAQHVVSGAMDGINGTIFAYGVTSSGKTHTM-------------------------- 158
Y+ A+ +V ++G NGTIFAYG TSSGKTHTM
Sbjct: 60 YNDCAKKIVKDVLEGYNGTIFAYGQTSSGKTHTMEGKLHDPEGMGIIPRIVQDIFNYIYS 119
Query: 159 HTPNREFLLRVSYLEIYNEVVNDLLNPAGQNLRIRED-SQGTFVEGVKEEVVLSPAHALS 217
N EF ++VSY EIY + + DLL+ + NL + ED ++ +V+G E V SP +
Sbjct: 120 MDENLEFHIKVSYFEIYLDKIRDLLDVSKTNLSVHEDKNRVPYVKGCTERFVCSPDEVMD 179
Query: 218 LIAAGEEHRHVGSTNFNLLSSRSHTIFTLTIESSPCGENSAGEAVNLSQLHLIDLAGSES 277
I G+ +RHV TN N SSRSH+IF + ++ EN+ E +L+L+DLAGSE
Sbjct: 180 TIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQ----ENTQTEQKLSGKLYLVDLAGSEK 235
Query: 278 -SKAETTGVRRKEGSYINKSLLTLGTVISKLTDGRATHIPYRDSKLTRLLQSSLSGHGRV 336
SK G E INKSL LG VIS L +G +T++PYRDSK+TR+LQ SL G+ R
Sbjct: 236 VSKTGAEGAVLDEAKNINKSLSALGNVISALAEG-STYVPYRDSKMTRILQDSLGGNCRT 294
Query: 337 SLICTVTPSSSSSEETHNTLKFAHRAKHI 365
+++ +PSS + ET +TL F RAK I
Sbjct: 295 TIVICCSPSSYNESETKSTLLFGQRAKTI 323
|
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354 | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349 | Back information, alignment and structure |
|---|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330 | Back information, alignment and structure |
|---|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362 | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364 | Back information, alignment and structure |
|---|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 861 | |||
| d1goja_ | 354 | Kinesin {Neurospora crassa [TaxId: 5141]} | 100.0 | |
| d1sdma_ | 364 | Kinesin heavy chain-like protein {Potato (Solanum | 100.0 | |
| d1v8ka_ | 362 | Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 | 100.0 | |
| d1bg2a_ | 323 | Kinesin {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2zfia1 | 349 | Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090 | 100.0 | |
| d1x88a1 | 345 | Kinesin {Human (Homo sapiens), mitotic kinesin eg5 | 100.0 | |
| d1f9va_ | 342 | Kinesin motor Ncd (non-claret disjunctional) {Bake | 100.0 | |
| d1ry6a_ | 330 | Kinesin {Malaria parasite (Plasmodium falciparum) | 100.0 | |
| d2ncda_ | 368 | Kinesin motor Ncd (non-claret disjunctional) {Frui | 100.0 | |
| d1l8qa2 | 213 | Chromosomal replication initiation factor DnaA {Aq | 93.78 | |
| d1w5sa2 | 287 | CDC6-like protein APE0152, N-terminal domain {Aero | 91.26 | |
| d1r7ra3 | 265 | Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu | 91.04 | |
| d1gvnb_ | 273 | Plasmid maintenance system epsilon/zeta, toxin zet | 88.0 | |
| d1p9ra_ | 401 | Extracellular secretion NTPase EpsE {Vibrio choler | 84.14 | |
| d1fnna2 | 276 | CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T | 81.63 | |
| d1lv7a_ | 256 | AAA domain of cell division protein FtsH {Escheric | 81.31 | |
| d1e32a2 | 258 | Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu | 80.12 |
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin species: Neurospora crassa [TaxId: 5141]
Probab=100.00 E-value=2.2e-75 Score=638.22 Aligned_cols=306 Identities=41% Similarity=0.629 Sum_probs=282.7
Q ss_pred CCCCeEEEEecCCCChhhhccCCe-EEEecCCCEEEeCCCCCceeEeeceecCCCCcchhHHHHHHHHHHHHhhcCCCee
Q 002982 65 SKENVTVTVRFRPLSPREIRQGEE-IAWYADGETILRNEDNPSIAYAYDRVFGPTTTTRHVYDIAAQHVVSGAMDGINGT 143 (861)
Q Consensus 65 ~~~~VkV~VRVRPl~~~E~~~g~~-~~~~~d~~~iv~~~~~~~~~F~FD~VF~~~atQeeVY~~~~~plV~~vl~GyN~t 143 (861)
..++|+|+|||||+...|...+.. ++...++.++..+.....+.|.||+||+++++|++||+.++.|+|+.+++|||+|
T Consensus 3 ~~~~I~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~f~FD~vf~~~~~q~~vy~~~~~plv~~~l~G~n~t 82 (354)
T d1goja_ 3 SANSIKVVARFRPQNRVEIESGGQPIVTFQGPDTCTVDSKEAQGSFTFDRVFDMSCKQSDIFDFSIKPTVDDILNGYNGT 82 (354)
T ss_dssp SSCBCEEEEEECCCCHHHHTTTCCBCEEECSTTEEEECSTTCCEEEECSEEECTTCCHHHHHHHHTHHHHHHHTTTCCEE
T ss_pred CCCCEEEEEEcCCCChHHHhcCCceEEEEECCCeEEEcCCCCcceEECCeEcCCCCCHHHHHHHHHHHHHHHhhccCcee
Confidence 357899999999999999877654 4455667777777777778999999999999999999999999999999999999
Q ss_pred EEEecccCCCCccccccCC---------------------------ccceeeEEEEEEecceeeeccCCCCCCceeeeCC
Q 002982 144 IFAYGVTSSGKTHTMHTPN---------------------------REFLLRVSYLEIYNEVVNDLLNPAGQNLRIREDS 196 (861)
Q Consensus 144 IfAYGqTGSGKTyTM~g~~---------------------------~~f~V~vSylEIYnE~I~DLL~p~~~~L~Ired~ 196 (861)
|||||||||||||||+|+. .+|.|+|||+|||||.|+|||.|....+.+++++
T Consensus 83 i~aYG~tgSGKT~Tm~G~~~~~~~~~Giipr~l~~l~~~~~~~~~~~~~~v~vS~~EIyne~i~DLL~~~~~~l~~~e~~ 162 (354)
T d1goja_ 83 VFAYGQTGAGKSYTMMGTSIDDPDGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQNDNLPVHEEK 162 (354)
T ss_dssp EEEECSTTSSHHHHHTBSCTTSTTTBCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSTTCCSCCEEEET
T ss_pred EEecccCCCCcceeeecccccCcccceecchhHHHHhhhhcccccCceEEEEeehhheecceEeecccccccceeeeeec
Confidence 9999999999999999742 2478999999999999999999998899999998
Q ss_pred C-CeEEcccEEEEecCHHHHHHHHHHhHhccccccccCCCCCCCceEEEEEEEEeccCCCCCCCceeeeeeeeeeecCCC
Q 002982 197 Q-GTFVEGVKEEVVLSPAHALSLIAAGEEHRHVGSTNFNLLSSRSHTIFTLTIESSPCGENSAGEAVNLSQLHLIDLAGS 275 (861)
Q Consensus 197 ~-G~~V~gLse~~V~S~ee~~~lL~~G~~~R~~asT~~N~~SSRSH~IftI~Veq~~~~~~~~~~~~~~SkL~LVDLAGS 275 (861)
. |++|.|++++.|.++++++.+|..|..+|.+++|.+|..|||||+||+|+|.+.... ......++|+||||||+
T Consensus 163 ~~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~~----~~~~~~s~l~~vDLAGs 238 (354)
T d1goja_ 163 NRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVE----TGSAKSGQLFLVDLAGS 238 (354)
T ss_dssp TTEEEETTCCCEECCSHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEEEEEEEETT----TTEEEEEEEEEEECCCC
T ss_pred CCCEeecCceeecchhHHHHHHHHhhcccccccccccccccccccceEEEEEEEEeecC----CCCeEEEEEEEeeccCc
Confidence 6 589999999999999999999999999999999999999999999999999876543 24567899999999999
Q ss_pred CC-ccccccchhhhhhhhcccchHHHHHHHHHHhcCCCCcccCCCCchhhhhhccCCCCccceeEEeeCCCCCChHHHHH
Q 002982 276 ES-SKAETTGVRRKEGSYINKSLLTLGTVISKLTDGRATHIPYRDSKLTRLLQSSLSGHGRVSLICTVTPSSSSSEETHN 354 (861)
Q Consensus 276 Er-~kt~~~G~rlkEg~~INkSL~aLg~VI~ALs~~k~~hIPYRDSKLTrLLqdSLGGNskT~mIa~ISPs~~~~eETLs 354 (861)
|+ .+++..|.+++|+..||+||++|++||.+|++++..||||||||||+||+|+|||||+|+|||||+|+..+++||++
T Consensus 239 E~~~~~~~~~~~~~e~~~IN~SL~~L~~vi~aL~~~~~~~iPyR~SkLT~lLkd~Lgg~s~t~~I~~isp~~~~~~eTl~ 318 (354)
T d1goja_ 239 EKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETLS 318 (354)
T ss_dssp SCCTTSSSCCCCTTTTGGGTSHHHHHHHHHHHHHHCSCSCCCGGGCHHHHHTGGGTTSSCEEEEEEEECCBGGGHHHHHH
T ss_pred ccccccCCccchhhhhhhhhHHHHHHHHHHHHHhcCCCCcCCcccCHHHHHHHHhcCCCCeEEEEEEECCCcccHHHHHH
Confidence 99 56788999999999999999999999999999888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHccccccccccccc
Q 002982 355 TLKFAHRAKHIEILAAQNKL 374 (861)
Q Consensus 355 TLrFAsRAk~Ikn~~~~N~l 374 (861)
||+||++||+|+|.|++|+.
T Consensus 319 TL~fa~~~~~i~~~~~~n~~ 338 (354)
T d1goja_ 319 TLRFGMRAKSIKNKAKVNAE 338 (354)
T ss_dssp HHHHHHHHHTCBCCCCCCSS
T ss_pred HHHHHHHHhccCccceEcCC
Confidence 99999999999999999974
|
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
| >d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
| >d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
| >d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
| >d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|