Citrus Sinensis ID: 003029
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 856 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SYM4 | 942 | Alpha,alpha-trehalose-pho | yes | no | 0.933 | 0.848 | 0.831 | 0.0 | |
| Q9FZ57 | 822 | Probable alpha,alpha-treh | no | no | 0.838 | 0.873 | 0.651 | 0.0 | |
| Q9T079 | 795 | Probable alpha,alpha-treh | no | no | 0.828 | 0.891 | 0.658 | 0.0 | |
| Q9SHG0 | 783 | Probable alpha,alpha-treh | no | no | 0.813 | 0.888 | 0.617 | 0.0 | |
| Q54K57 | 733 | Alpha,alpha-trehalose-pho | yes | no | 0.773 | 0.903 | 0.424 | 1e-167 | |
| P40387 | 513 | Alpha,alpha-trehalose-pho | yes | no | 0.577 | 0.962 | 0.483 | 1e-135 | |
| Q00075 | 517 | Alpha,alpha-trehalose-pho | yes | no | 0.544 | 0.901 | 0.5 | 1e-134 | |
| O74932 | 469 | Alpha,alpha-trehalose-pho | yes | no | 0.532 | 0.972 | 0.505 | 1e-133 | |
| Q00764 | 495 | Alpha,alpha-trehalose-pho | yes | no | 0.536 | 0.927 | 0.497 | 1e-133 | |
| Q92410 | 478 | Alpha,alpha-trehalose-pho | N/A | no | 0.545 | 0.976 | 0.498 | 1e-133 |
| >sp|Q9SYM4|TPS1_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana GN=TPS1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1384 bits (3581), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 669/805 (83%), Positives = 731/805 (90%), Gaps = 6/805 (0%)
Query: 1 MPGNSYNSNSSNIPPDRVTRLVREKIERDLRKSSRASHPNDVTDNGGREVFEDEQRLRDG 60
MPGN YN +SS+IP R RL+R++ R+ RKS+RA +PNDV G E E++ RL +G
Sbjct: 1 MPGNKYNCSSSHIPLSRTERLLRDRELREKRKSNRARNPNDVA--GSSENSENDLRL-EG 57
Query: 61 DNLGPSIVDEDLEGPASTPNEG--CERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLE 118
D+ V++ LEG A+ CER + R ++RQRLLVVANRLPVSA+RRGEDSWSLE
Sbjct: 58 DS-SRQYVEQYLEGAAAAMAHDDACERQEVRPYNRQRLLVVANRLPVSAVRRGEDSWSLE 116
Query: 119 ISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYY 178
ISAGGLVSALLGVKEFEARWIGWAGVNVPDE+GQKAL+KALAEKRCIPVFLDE+IVHQYY
Sbjct: 117 ISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALSKALAEKRCIPVFLDEEIVHQYY 176
Query: 179 NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCH 238
NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAY KANQMFADVVN+HY++GDVVWCH
Sbjct: 177 NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWCH 236
Query: 239 DYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDY 298
DYHLMFLPKCLKEYNS MKVGWFLHTPFPSSEIHRTLPSRS+LLR+VLAADLVGFHTYDY
Sbjct: 237 DYHLMFLPKCLKEYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDY 296
Query: 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQE 358
ARHFVSACTRILG EGTPEGVEDQGRLTRVAAFPIGIDS+RFIRALE+ V H+KEL+E
Sbjct: 297 ARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKE 356
Query: 359 TFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRL 418
FAGRKVMLGVDRLDMIKGIPQK+LAFEKFLEEN++WR KVVLLQIAVPTRTDVPEYQ+L
Sbjct: 357 RFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKL 416
Query: 419 TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 478
TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF ALCALYAVTDVALVTSLRDGMNLVSYE
Sbjct: 417 TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYE 476
Query: 479 FVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 538
FVACQ+ KKGVLILSEFAGAAQSLGAGAILVNPWNITEVA +I +ALNM+ EEREKRH H
Sbjct: 477 FVACQEAKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRH 536
Query: 539 NFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGF 598
NF HV THTAQEWAETFVSELNDTV+EAQLRI +VPP L + D+I+RY +SNNRLLILGF
Sbjct: 537 NFHHVKTHTAQEWAETFVSELNDTVIEAQLRISKVPPELPQHDAIQRYSKSNNRLLILGF 596
Query: 599 NATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658
NATLTEPVD GRRGDQI+EM+L LHP+LK PL ALC DP TTIVVLSGS R+VLDKNF
Sbjct: 597 NATLTEPVDNQGRRGDQIKEMDLNLHPELKGPLKALCSDPSTTIVVLSGSSRSVLDKNFG 656
Query: 659 EYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSL 718
EY++WLAAENGMFLR T G+WMTTMPEHLNMEWVDS+KHVF+YFTERTPRSHFE R+TSL
Sbjct: 657 EYDMWLAAENGMFLRLTNGEWMTTMPEHLNMEWVDSVKHVFKYFTERTPRSHFETRDTSL 716
Query: 719 VWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILA 778
+WNYKYAD+EFGR+QARD+LQHLWTGPISNASV+VVQGS+SVEVRAVGVTKGAAIDRIL
Sbjct: 717 IWNYKYADIEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILG 776
Query: 779 EIVHSKKMKTAIDYVLCIGHFLGKN 803
EIVHSK M T IDYVLCIGHFLGK+
Sbjct: 777 EIVHSKSMTTPIDYVLCIGHFLGKD 801
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Required for normal embryo development, vegetative growth and transition to flowering. Regulates embryo growth, cell wall deposition, starch and sucrose degradation, but not cell differentiation. Involved in the regulation of glucose sensing and signaling genes during plant development. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 5 |
| >sp|Q9FZ57|TPS2_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Arabidopsis thaliana GN=TPS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1012 bits (2617), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/726 (65%), Positives = 600/726 (82%), Gaps = 8/726 (1%)
Query: 93 RQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIG 151
R RLLVVANRLPVSA R GE+SWSLE+S GGLVS LLG+ +F+ +W+GW GV+V DEI
Sbjct: 11 RPRLLVVANRLPVSAKRTGENSWSLEMSPGGLVSGLLGITSQFDTKWVGWPGVDVHDEIE 70
Query: 152 QKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQF 211
+ ALT++LAE +CIPVFL+ + QYYNGYCN ILWP+ H++GLPQED+ T ++F++Q+
Sbjct: 71 KNALTESLAEMKCIPVFLN-GVFDQYYNGYCNGILWPILHHMGLPQEDQHDTNQTFETQY 129
Query: 212 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI 271
AY KAN+MF DV+ +Y++GD+VWCHDYHLMFLP+ LKEYN+ +KVGWFLH+PFPSSE+
Sbjct: 130 DAYKKANRMFLDVIIDNYEEGDIVWCHDYHLMFLPQYLKEYNNKIKVGWFLHSPFPSSEV 189
Query: 272 HRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAF 331
++TLPSRS+LLRA+LAADL+GFHTYD+ARHF+S CTRILG EGT EGV QGR+TRVA F
Sbjct: 190 YKTLPSRSELLRAILAADLLGFHTYDFARHFLSTCTRILGVEGTHEGVVYQGRVTRVAVF 249
Query: 332 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEE 391
PIGID +RFIR ++ V + ELQE FAG+KV+LGVDRLDMIKGIPQK LAFEKFLEE
Sbjct: 250 PIGIDPDRFIRTCKLPEVTQQMNELQEKFAGKKVILGVDRLDMIKGIPQKYLAFEKFLEE 309
Query: 392 NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFP 451
N WR KVVL+QIAVPTR DVPEY++L SQVH +VGRINGRFG+++++PIHHLD S+DF
Sbjct: 310 NPYWRDKVVLVQIAVPTRNDVPEYRKLKSQVHGLVGRINGRFGSVSSLPIHHLDCSVDFN 369
Query: 452 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNP 511
LCA+YA+ DV LVTSLRDGMNLVSYEFVACQ+ KKGVL+LSEFAGA QSLG GA++VNP
Sbjct: 370 YLCAIYAIADVMLVTSLRDGMNLVSYEFVACQEAKKGVLVLSEFAGAGQSLGVGALIVNP 429
Query: 512 WNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIK 571
W++TEV++AI ALNM EERE RH NF +V TH+A++W F+SELN + E++++++
Sbjct: 430 WDVTEVSSAIKEALNMPAEERETRHRSNFQYVCTHSAEKWGLDFMSELNGIIPESEMQMR 489
Query: 572 QVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPL 631
++P L E D I++Y +SNNRL+ILGF TL EP+++ +EM+LKL+P+LK L
Sbjct: 490 KIPLQLPEQDVIQQYSQSNNRLIILGFFGTLAEPMNS------GTKEMDLKLNPELKGTL 543
Query: 632 NALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEW 691
ALC+DPKTT+VVLS S +N+L+KNF E N+WLAAENGMF + TTG+W+T MP+++N++W
Sbjct: 544 KALCNDPKTTVVVLSRSGKNILNKNFGESNIWLAAENGMFEKQTTGEWVTNMPQNVNLDW 603
Query: 692 VDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASV 751
VD +K+VF+YFT+RTPRS+FE ETSLVWNY+YADVEFGR QARD+LQ+LW GPISNASV
Sbjct: 604 VDGVKNVFKYFTDRTPRSYFEASETSLVWNYEYADVEFGRAQARDLLQYLWAGPISNASV 663
Query: 752 EVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFL 811
+VV+G+ SVEV A+G TKGAAI RIL EIVH K M T ID+V C G+FL K+ ++ F
Sbjct: 664 DVVRGNHSVEVHAIGETKGAAIGRILGEIVHRKSMTTPIDFVFCSGYFLEKDEDIYTFFE 723
Query: 812 MQTIST 817
+ +S+
Sbjct: 724 SKILSS 729
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9T079|TPS4_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4 OS=Arabidopsis thaliana GN=TPS4 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 993 bits (2567), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/723 (65%), Positives = 575/723 (79%), Gaps = 14/723 (1%)
Query: 91 FSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEI 150
+R RLLVV+ LPV+A R GE+SWS +S GGLVSALLG+KEFE +WIGW GV+V D I
Sbjct: 1 MARPRLLVVSMSLPVTAKRTGEESWSFTMSPGGLVSALLGLKEFETKWIGWPGVDVHDAI 60
Query: 151 GQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQ 210
G+K L+ LAEK CIPVFL+E + QYYNGYCNNILWP+FHYLG P E R T ++QSQ
Sbjct: 61 GKKTLSITLAEKGCIPVFLEE-VCDQYYNGYCNNILWPIFHYLGTPPEYRNDATITYQSQ 119
Query: 211 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSE 270
+ AY KANQ+F DVV +HY++GDVVWCHDYH+M LP+ LKEYNS MKVGWFLHTPFPSSE
Sbjct: 120 YEAYKKANQIFFDVVKEHYEEGDVVWCHDYHVMLLPQYLKEYNSKMKVGWFLHTPFPSSE 179
Query: 271 IHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAA 330
+++TLPSRSDLLR+VL ADLVGFHTYD+ARHF++AC ILG E T EG+ DQG++TRVA
Sbjct: 180 MYKTLPSRSDLLRSVLTADLVGFHTYDFARHFLNACMCILGVEATSEGIVDQGKVTRVAV 239
Query: 331 FPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390
FPIGI+ ERFI E++ V ++K+ + F GRK++LGVDRLD IKGIPQK AFEKFLE
Sbjct: 240 FPIGIEPERFINTSELSEVVQYMKKFKNDFGGRKLILGVDRLDTIKGIPQKYQAFEKFLE 299
Query: 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF 450
EN++WRGKV+LLQIAVPTR + EYQ++ Q H VGRINGRFG++++VPI HLD S+DF
Sbjct: 300 ENAEWRGKVMLLQIAVPTRNGIGEYQKIKDQCHYHVGRINGRFGSISSVPIIHLDCSIDF 359
Query: 451 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVN 510
LCALYA+TDV LVTSLRDGMNLVS EF+ACQ +KGVLILSEFAGA QSLGAGAILVN
Sbjct: 360 NQLCALYAITDVLLVTSLRDGMNLVSSEFIACQKAEKGVLILSEFAGAGQSLGAGAILVN 419
Query: 511 PWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV---------SELND 561
PWNI EV++AI ALNMS EE+E++H NF +V TH+ Q+WA+ F+ S+L +
Sbjct: 420 PWNIKEVSSAIGEALNMSHEEKERKHKINFQYVKTHSTQQWADDFMKLTLTNILCSKLIE 479
Query: 562 TVVEAQLRIKQVPP-SLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREME 620
A+L L E D I++Y +SNNRLLILGF TLT+P+ RRGD M
Sbjct: 480 ITTSAELGAGLAATLELPEHDVIQQYSKSNNRLLILGFYGTLTQPMKNQERRGDG---MN 536
Query: 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWM 680
L+LHP LK+ L LC DPKTT+VVLS S++ +LDKNF EYN+WLAAENGMFLR T+G+W+
Sbjct: 537 LELHPQLKERLKELCSDPKTTVVVLSRSEKCILDKNFGEYNMWLAAENGMFLRHTSGEWV 596
Query: 681 TTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQH 740
T +PEH+N+EW+D +KHVF+YFTERTP S+ E E SLVWNY+ AD EFGR QARDMLQH
Sbjct: 597 TRIPEHMNLEWIDGVKHVFKYFTERTPGSYLETSEASLVWNYENADAEFGRAQARDMLQH 656
Query: 741 LWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL 800
LW GPISNASV+VV+G +SVEV AVGVTKG+A++RIL EIVH+K M T IDYVLCIG FL
Sbjct: 657 LWAGPISNASVDVVRGGQSVEVHAVGVTKGSAMERILGEIVHNKSMATPIDYVLCIGCFL 716
Query: 801 GKN 803
GK+
Sbjct: 717 GKD 719
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9SHG0|TPS3_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 3 OS=Arabidopsis thaliana GN=TPS3 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 939 bits (2428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/724 (61%), Positives = 566/724 (78%), Gaps = 28/724 (3%)
Query: 93 RQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQ 152
RQ LLVVANRLP SA R GE SWSLE+S GG + L + +
Sbjct: 10 RQTLLVVANRLPASAKRTGEHSWSLEMSPGGKFNLL---------------------VEK 48
Query: 153 KALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFA 212
A++K+LAE +CIPVFL+E + QYYNGY N ILWP+ H++GLPQE T ++F++Q+
Sbjct: 49 DAVSKSLAEMKCIPVFLNE-VFDQYYNGYSNGILWPILHHMGLPQEYDHDTIKTFETQYD 107
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIH 272
AY KAN+MF DV+ ++YKDGD+VWC DYHLMFLP+ LKEYN+ +KVGWFLH+PFPSSEI+
Sbjct: 108 AYKKANRMFLDVIKENYKDGDIVWCQDYHLMFLPQYLKEYNNKIKVGWFLHSPFPSSEIY 167
Query: 273 RTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP 332
+TLPSRS+LLR+VLAADL+ FHTYD+ARHFV+ CTRILG EGT EGV QGR+TRV P
Sbjct: 168 KTLPSRSELLRSVLAADLISFHTYDFARHFVNTCTRILGVEGTHEGVVYQGRVTRVVVLP 227
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
+GI RFI+ ++ V + EL++ F+G+KV+LGVDRLDMIKGIPQK L FEKFL+EN
Sbjct: 228 MGIYPNRFIKTCKLPEVIQQMNELKDRFSGKKVILGVDRLDMIKGIPQKYLGFEKFLDEN 287
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
+WR K+VL+QIAVPTR +VPEYQ+L +QVH +VGRINGRFG+++++PIHH+D S+D
Sbjct: 288 PNWRDKIVLVQIAVPTRNEVPEYQKLKNQVHRLVGRINGRFGSVSSLPIHHMDCSVDSNY 347
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW 512
LCALYA++DV LVTSLRDG+NLVS+EFVACQ+ K+GVLILSEFAGA QSLGAGA+LVNPW
Sbjct: 348 LCALYAISDVMLVTSLRDGLNLVSHEFVACQEAKRGVLILSEFAGAGQSLGAGALLVNPW 407
Query: 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQ 572
N+TEV++AI +ALNM EERE RH NF +V TH+A++W F+SELND E++L+I++
Sbjct: 408 NVTEVSSAIKKALNMPYEERETRHRVNFKYVKTHSAEKWGFDFLSELNDAFDESELQIRK 467
Query: 573 VPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLN 632
+P L + D I+RY SNNRL+ILGF T+TEP R +EM+LKL+P+LK+ L
Sbjct: 468 IPHELPQQDVIQRYSLSNNRLIILGFYGTITEP------RNSLSKEMDLKLNPELKETLK 521
Query: 633 ALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWV 692
ALC+DPKTT+VVLS S +N+LDKNF EY +WLAAENGMFL+ TT +W+T MP+++N++WV
Sbjct: 522 ALCNDPKTTVVVLSRSGKNILDKNFGEYKIWLAAENGMFLKHTTEEWVTNMPQNMNLDWV 581
Query: 693 DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVE 752
D LK+VF+YFT+RTPRS FE +TSLVWNY+YADVEFGR QARD+LQ+LW GPISNAS E
Sbjct: 582 DGLKNVFKYFTDRTPRSFFEASKTSLVWNYEYADVEFGRAQARDLLQYLWAGPISNASAE 641
Query: 753 VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLM 812
VV+G SVEV A+GVTK I IL EIVH K M T IDYV C G+FL K+ ++ F
Sbjct: 642 VVRGKYSVEVHAIGVTKEPEIGHILGEIVHKKAMTTPIDYVFCSGYFLEKDEDIYTFFES 701
Query: 813 QTIS 816
+ +S
Sbjct: 702 EILS 705
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q54K57|TPSA_DICDI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A OS=Dictyostelium discoideum GN=tpsA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 588 bits (1515), Expect = e-167, Method: Compositional matrix adjust.
Identities = 303/714 (42%), Positives = 448/714 (62%), Gaps = 52/714 (7%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKA 154
RL+VV+NRLPVS + WS ++S+GGLV+AL G+K W+GW G + ++ ++
Sbjct: 17 RLIVVSNRLPVSIKKESNGKWSCKMSSGGLVAALSGLKS-NFIWVGWIGAEIEEDDRKEI 75
Query: 155 LTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYL--GLPQEDRLATTRSFQSQFA 212
+ CIPVFL E + +++YNG+ N +LWPLFHYL L +DR+ +
Sbjct: 76 KELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHYLPGDLDYDDRI---------WN 126
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIH 272
+Y++AN+ F+ VV + K D+VW HDYH+M LP+ LK+ D ++G+FLH PFPSSEI
Sbjct: 127 SYVEANEQFSSVVAEILKPNDLVWVHDYHMMLLPEILKQKKPDARIGFFLHIPFPSSEIF 186
Query: 273 RTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP 332
R LP R ++L +L L+GFHTYDYARHF+ +CTRI+G E P GV + R +V FP
Sbjct: 187 RVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPNGVYFKDRFVQVGVFP 246
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
+GID ++F +L+ VQ IKEL+E+F G KV++G+DRLD IKGIPQKL A E+ ++
Sbjct: 247 VGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIKGIPQKLQAIERLFQKY 306
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
+W+GK+VL+Q+AVP+R DV EYQ+L +V E+VGRING +G++ PIH+L +S+D
Sbjct: 307 PEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHYLFQSVDPSE 366
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW 512
L ALY ++D AL+TS+RDGMNLV+ E++ CQ GVLILSEF GAAQSL +GA+++NPW
Sbjct: 367 LTALYNISDAALITSIRDGMNLVAQEYIVCQTENNGVLILSEFTGAAQSL-SGAVMINPW 425
Query: 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN------DTVVEA 566
N EVA++I +L M PEERE++H +VT HTA W FV ELN D +V
Sbjct: 426 NTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHWGLGFVKELNKASSNTDKMVTI 485
Query: 567 Q-LRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPG-RRGDQIREMELKLH 624
Q L I++V ++ Y +S RLLI ++ TL + P R Q
Sbjct: 486 QKLDIEKV---------VDIYKQSKRRLLIFAYDGTLIPYNNVPQLSRPSQ--------- 527
Query: 625 PDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRC-TTGKWMTTM 683
+L + L +DPKT + +LSG D+ L + F + L+AE G F + + +W +
Sbjct: 528 -ELLNSFDILSNDPKTDVYILSGRDKKTLSEWFLGIQIGLSAEYGCFFKLPESTEWEQQV 586
Query: 684 PEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWT 743
P +++ W ++++ +F+YFT RTP S FE++E W+Y+ AD FG IQAR++ HL
Sbjct: 587 PS-MDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHYRNADPIFGSIQARELHLHL-- 643
Query: 744 GPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797
N ++V+ G K++ VR+ + +++ +++ + + +D +L IG
Sbjct: 644 ---DNLPLDVIVGDKTLGVRSYNINPLSSMKKVITDTI-----PKGLDLILLIG 689
|
Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|P40387|TPS1_SCHPO Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tps1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 484 bits (1245), Expect = e-135, Method: Compositional matrix adjust.
Identities = 245/507 (48%), Positives = 335/507 (66%), Gaps = 13/507 (2%)
Query: 77 STPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEA 136
S ++ + L G + +RL+VV+NRLP++ R+ ++ +S+GGLVSAL G+K+
Sbjct: 2 SDAHDTIKSLTGDASNSRRLIVVSNRLPITIKRKDNGTYDFSMSSGGLVSALSGLKKLMT 61
Query: 137 -RWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGL 195
+W+GW G +P++ + + E IPVFLD++ ++YNG+ N+ILWPLFHY
Sbjct: 62 FQWLGWCGQEIPEDEKPMIIQRLQDECSAIPVFLDDETADRHYNGFSNSILWPLFHYH-- 119
Query: 196 PQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY--- 252
P E + + AY AN FA+ + K+ +DGD++W DYHLM LP+ L+E
Sbjct: 120 PGEINFD-----EENWEAYRAANYAFAEAIVKNLQDGDLIWVQDYHLMVLPQMLRELIGD 174
Query: 253 -NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILG 311
D+K+G+FLHTPFPSSEI+R LP R+++L VL DLVGFHTYDYARHF+SAC+RIL
Sbjct: 175 KFKDIKIGFFLHTPFPSSEIYRVLPVRNEILEGVLNCDLVGFHTYDYARHFLSACSRILN 234
Query: 312 FEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR 371
P GVE G++ V FPIGID E+F AL+ + V+ I ++ G KV++GVDR
Sbjct: 235 LSTLPNGVEYNGQMVSVGTFPIGIDPEKFSDALKSDVVKDRIASIERRLQGVKVIVGVDR 294
Query: 372 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING 431
LD IKG+PQK AFE FLE+ +W GKVVL+Q+AVP+R DV EYQ L + V+E+VGRING
Sbjct: 295 LDYIKGVPQKFHAFEVFLEQYPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRING 354
Query: 432 RFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 491
RFGT+ PIH L +S+ F L ALY V+DV L+TS RDGMNLVSYE++ Q + G LI
Sbjct: 355 RFGTVEYTPIHFLHKSVRFEELVALYNVSDVCLITSTRDGMNLVSYEYICTQQERHGALI 414
Query: 492 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEW 551
LSEFAGAAQSL G+I++NPWN E+AN+I AL M ++RE F +V +T+Q W
Sbjct: 415 LSEFAGAAQSLN-GSIVINPWNTEELANSIHDALTMPEKQREANENKLFRYVNKYTSQFW 473
Query: 552 AETFVSELNDTVVEAQLRIKQVPPSLR 578
++FV EL + ++ P LR
Sbjct: 474 GQSFVGELQRIQHYSHPHPRRTNPILR 500
|
Appears to have a role in spore germination. In S.pombe it appears to have no role in the control of the initial steps of glycolysis. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q00075|TPSA_ASPNG Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Aspergillus niger GN=tpsA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 481 bits (1237), Expect = e-134, Method: Compositional matrix adjust.
Identities = 240/480 (50%), Positives = 329/480 (68%), Gaps = 14/480 (2%)
Query: 86 LDGRTFSRQ-RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAG 143
L+ TF + RLL+V+NRLP++ R + + +S+GGLVS L G+ K +W GW G
Sbjct: 4 LENPTFQNEARLLLVSNRLPITIKRSDDGRYDFSMSSGGLVSGLSGLSKSTTFQWYGWPG 63
Query: 144 VNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLAT 203
+ VP+E + E +PVF+D+++ ++YNG+ N+ILWPLFHY P E
Sbjct: 64 LEVPEEEIPVVKERLKQEYNAVPVFIDDELADRHYNGFSNSILWPLFHYH--PGEITFD- 120
Query: 204 TRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSD----MKVG 259
+S + AY +AN++FA V K +DGD++W HDYHLM LP+ L+E D +K+G
Sbjct: 121 ----ESAWEAYKEANRLFAKAVAKEVQDGDLIWVHDYHLMLLPEMLREEIGDSKENVKIG 176
Query: 260 WFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGV 319
+FLHTPFPSSEI+R LP R++LL VL DL+GFHTYDY RHF+SAC+R+LG TP G+
Sbjct: 177 FFLHTPFPSSEIYRILPVRNELLLGVLHCDLIGFHTYDYTRHFLSACSRLLGLTTTPNGI 236
Query: 320 EDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 379
E QG++ AFPIGID E+F L+ VQ I L++ F G K+M+GVDRLD IKG+P
Sbjct: 237 EFQGKIIACGAFPIGIDPEKFEEGLKKEKVQKRIAMLEQKFQGVKLMVGVDRLDYIKGVP 296
Query: 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439
QKL A E FL ++ +W GKVVL+Q+AVP+R DV EYQ L + V+E+VGRING+FGT+ +
Sbjct: 297 QKLHALEVFLSDHPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTVEFM 356
Query: 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA 499
PIH L +S++F L ALYAV+D +V+S RDGMNLV+YE++A Q + GVL+LSEFAGAA
Sbjct: 357 PIHFLHKSVNFDELIALYAVSDACIVSSTRDGMNLVAYEYIATQKKRHGVLVLSEFAGAA 416
Query: 500 QSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559
QSL G+I++NPWN E+A A A+ MS E+R +V +T+ W ++FV+EL
Sbjct: 417 QSLN-GSIIINPWNTEELAGAYQEAVTMSDEQRALNFSKLDKYVNKYTSAFWGQSFVTEL 475
|
Aspergillus niger (taxid: 5061) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|O74932|TPS1_YARLI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=TPS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust.
Identities = 238/471 (50%), Positives = 322/471 (68%), Gaps = 15/471 (3%)
Query: 96 LLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEA-RWIGWAGVNVPDEIGQKA 154
+LV++NRLPV+ R + ++ +S+GGLV+AL G+K+ +W GW G+ +P++ +
Sbjct: 4 VLVISNRLPVTISREEDGTYKYTMSSGGLVTALSGLKQSTTFQWFGWPGLEIPEKDKPRL 63
Query: 155 LTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAY 214
+ C+PVF+D+D+ +YNG+ N+ILWPLFHY P E Q + AY
Sbjct: 64 INDLETMFSCVPVFMDDDLADLHYNGFSNSILWPLFHYH--PGEMNFD-----QVAWEAY 116
Query: 215 IKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSD------MKVGWFLHTPFPS 268
+AN++FA V K GD+VW HDYHLM LP+ L+E + +K+G+FLHTPFPS
Sbjct: 117 TQANRLFAKKVASIVKPGDIVWVHDYHLMLLPEMLREECENNSALDGLKIGFFLHTPFPS 176
Query: 269 SEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRV 328
SEI+R LP R ++L VL+ +L+GFHTYDYARHF+S+ +RIL E P G +GR V
Sbjct: 177 SEIYRILPVRKEVLTGVLSCNLIGFHTYDYARHFLSSVSRILDLETMPNGTYYKGRHVVV 236
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
AFPIGID +F+ + VQ I +LQ+ F G KV++GVDRLD IKG+PQKL AFE F
Sbjct: 237 GAFPIGIDVNKFLEGCKRPAVQERIAQLQDKFKGIKVVVGVDRLDYIKGVPQKLHAFEVF 296
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448
L E+ +W GKVVL+Q+AVP+R V EYQ L + V+E+VGRING FGT+ PIH + RS+
Sbjct: 297 LSEHPEWIGKVVLVQVAVPSRGLVEEYQNLRAVVNELVGRINGMFGTVEFTPIHFMHRSV 356
Query: 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 508
DF L ALY+++DV V+S RDGMNLVSYE+VACQ K G LILSEF GAAQSL GA++
Sbjct: 357 DFNELIALYSISDVCFVSSTRDGMNLVSYEYVACQTEKHGSLILSEFTGAAQSLN-GALI 415
Query: 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559
VNPWN ++A A+ +L SPE++ + H F +V+ +T+Q W E FVSEL
Sbjct: 416 VNPWNTEDMAEALYDSLTFSPEKKAENHRKLFKYVSKYTSQHWGEAFVSEL 466
|
Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q00764|TPS1_YEAST Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 56 kDa subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPS1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/476 (49%), Positives = 329/476 (69%), Gaps = 17/476 (3%)
Query: 92 SRQRLLVVANRLPVSAIRRGEDS-WSLEISAGGLVSALLGVKE-FEARWIGWAGVNVPDE 149
S ++VV+NRLPV+ + + +S+GGLV+AL G+K+ + +W GW G+ +PD+
Sbjct: 14 SGGNIIVVSNRLPVTITKNSSTGQYEYAMSSGGLVTALEGLKKTYTFKWFGWPGLEIPDD 73
Query: 150 IGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQS 209
+ L + +P+FL ++I +YNG+ N+ILWPLFHY P E ++
Sbjct: 74 EKDQVRKDLLEKFNAVPIFLSDEIADLHYNGFSNSILWPLFHYH--PGEINFD-----EN 126
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLK-----EYNSDMKVGWFLHT 264
+ AY +ANQ F + + K D++W HDYHLM +P+ L+ + ++KVGWFLHT
Sbjct: 127 AWLAYNEANQTFTNEIAKTMNHNDLIWVHDYHLMLVPEMLRVKIHEKQLQNVKVGWFLHT 186
Query: 265 PFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGR 324
PFPSSEI+R LP R ++L+ VL+ DLVGFHTYDYARHF+S+ R+L P GVE QGR
Sbjct: 187 PFPSSEIYRILPVRQEILKGVLSCDLVGFHTYDYARHFLSSVQRVLNVNTLPNGVEYQGR 246
Query: 325 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384
V AFPIGID ++F L+ VQ I++L+ETF G K+++GVDRLD IKG+PQKL A
Sbjct: 247 FVNVGAFPIGIDVDKFTDGLKKESVQKRIQQLKETFKGCKIIVGVDRLDYIKGVPQKLHA 306
Query: 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHL 444
E FL E+ +WRGKVVL+Q+AVP+R DV EYQ L S V+E+VGRING+FGT+ VPIH +
Sbjct: 307 MEVFLNEHPEWRGKVVLVQVAVPSRGDVEEYQYLRSVVNELVGRINGQFGTVEFVPIHFM 366
Query: 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA 504
+S+ F L +LYAV+DV LV+S RDGMNLVSYE++ACQ+ KKG LILSEF GAAQSL
Sbjct: 367 HKSIPFEELISLYAVSDVCLVSSTRDGMNLVSYEYIACQEEKKGSLILSEFTGAAQSLN- 425
Query: 505 GAILVNPWNITEVANAIARALNMSPEEREKRHWHN-FTHVTTHTAQEWAETFVSEL 559
GAI+VNPWN ++++AI AL + P+ +++ +W + +++ +T+ W E FV EL
Sbjct: 426 GAIIVNPWNTDDLSDAINEALTL-PDVKKEVNWEKLYKYISKYTSAFWGENFVHEL 480
|
Synthase catalytic subunit of the trehalose synthase complex that catalyzes the production of trehalose from glucose-6-phosphate and UDP-glucose in a two step process. Can function independently of the complex. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q92410|TPS1_CANAL Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=TPS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/481 (49%), Positives = 330/481 (68%), Gaps = 14/481 (2%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEF-EARWIGWAGVNVPDEIGQK 153
++LVV+NR+PV+ R S+ +S+GGLV+AL G+K+ E +W GW G+ +P++ K
Sbjct: 5 KVLVVSNRIPVTIKRLDNGSYDYSMSSGGLVTALQGLKKTTEFQWYGWPGLEIPEDEQTK 64
Query: 154 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 213
+ ++ C +FL + I +YNG+ N+ILWPLFHY P E ++ +AA
Sbjct: 65 VNDELKSKFNCTAIFLSDTIADLHYNGFSNSILWPLFHYH--PGEMNFD-----ENAWAA 117
Query: 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE----YNSDMKVGWFLHTPFPSS 269
YI+AN+ FA + K D D++W HDYHLM LP+ L++ ++K+G+FLHTPFPSS
Sbjct: 118 YIEANKKFALEIVKQVNDDDMIWVHDYHLMLLPEMLRQEIGNKKKNIKIGFFLHTPFPSS 177
Query: 270 EIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGT-PEGVEDQGRLTRV 328
EI+R LP R ++L VL+ DL+GFHTYDYARHF+S+ +RI+ T P G++ QGR +
Sbjct: 178 EIYRILPVRKEILEGVLSCDLIGFHTYDYARHFISSVSRIVPNVSTLPNGIKYQGRSISI 237
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
AFPIGID + FI L+ + V IK+L+ F KV++GVDRLD IKG+PQKL AFE F
Sbjct: 238 GAFPIGIDVDNFIDGLKKDSVVERIKQLKSKFKDVKVIVGVDRLDYIKGVPQKLHAFEVF 297
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448
L EN +W GKVVL+Q+AVP+R DV EYQ L S V E+VGRING FGT+ VPIH+L +S+
Sbjct: 298 LNENPEWIGKVVLVQVAVPSRGDVEEYQSLRSTVSELVGRINGEFGTVEFVPIHYLHKSI 357
Query: 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 508
F L +LY ++DV LV+S RDGMNLVSYE++ACQ +KGVLILSEFAGAAQSL GA++
Sbjct: 358 PFDELISLYNISDVCLVSSTRDGMNLVSYEYIACQQDRKGVLILSEFAGAAQSLN-GALI 416
Query: 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQL 568
VNPWN +++ AI +L + E+RE FT+++ +T+ W E+FV EL + L
Sbjct: 417 VNPWNTEDLSEAIKESLTLPEEKREFNFKKLFTYISKYTSGFWGESFVKELYKCNPQKSL 476
Query: 569 R 569
R
Sbjct: 477 R 477
|
Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 856 | ||||||
| TAIR|locus:2202990 | 942 | TPS1 "trehalose-6-phosphate sy | 0.933 | 0.848 | 0.808 | 0.0 | |
| TAIR|locus:2137712 | 795 | TPS4 "trehalose-6-phosphatase | 0.827 | 0.890 | 0.641 | 2.7e-251 | |
| DICTYBASE|DDB_G0287657 | 733 | tpsA "alpha,alpha-trehalose-ph | 0.786 | 0.918 | 0.420 | 1e-146 | |
| UNIPROTKB|G4NHF4 | 529 | MGG_03860 "Alpha,alpha-trehalo | 0.533 | 0.863 | 0.5 | 2e-118 | |
| POMBASE|SPAC328.03 | 513 | tps1 "alpha,alpha-trehalose-ph | 0.554 | 0.925 | 0.481 | 2.6e-118 | |
| ASPGD|ASPL0000027021 | 504 | tpsA [Emericella nidulans (tax | 0.553 | 0.940 | 0.484 | 1.1e-117 | |
| SGD|S000000330 | 495 | TPS1 "Synthase subunit of treh | 0.533 | 0.923 | 0.489 | 1.1e-117 | |
| CGD|CAL0004028 | 478 | TPS1 [Candida albicans (taxid: | 0.545 | 0.976 | 0.486 | 2.1e-116 | |
| UNIPROTKB|Q92410 | 478 | TPS1 "Alpha,alpha-trehalose-ph | 0.545 | 0.976 | 0.486 | 2.1e-116 | |
| TAIR|locus:2199847 | 867 | TPS9 "trehalose-phosphatase/sy | 0.568 | 0.561 | 0.360 | 3.7e-116 |
| TAIR|locus:2202990 TPS1 "trehalose-6-phosphate synthase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3402 (1202.6 bits), Expect = 0., P = 0.
Identities = 651/805 (80%), Positives = 711/805 (88%)
Query: 1 MPGXXXXXXXXXIPPDRVTRLVREKIERDLRKSSRASHPNDVTDNGGREVFEDEQRLRDG 60
MPG IP R RL+R++ R+ RKS+RA +PNDV G E E++ RL +G
Sbjct: 1 MPGNKYNCSSSHIPLSRTERLLRDRELREKRKSNRARNPNDVA--GSSENSENDLRL-EG 57
Query: 61 DNLGPSIVDEDLEGPASTP--NEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLE 118
D+ V++ LEG A+ ++ CER + R ++RQRLLVVANRLPVSA+RRGEDSWSLE
Sbjct: 58 DS-SRQYVEQYLEGAAAAMAHDDACERQEVRPYNRQRLLVVANRLPVSAVRRGEDSWSLE 116
Query: 119 ISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYY 178
ISAGGLVSALLGVKEFEARWIGWAGVNVPDE+GQKAL+KALAEKRCIPVFLDE+IVHQYY
Sbjct: 117 ISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALSKALAEKRCIPVFLDEEIVHQYY 176
Query: 179 NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCH 238
NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAY KANQMFADVVN+HY++GDVVWCH
Sbjct: 177 NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWCH 236
Query: 239 DYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDY 298
DYHLMFLPKCLKEYNS MKVGWFLHTPFPSSEIHRTLP GFHTYDY
Sbjct: 237 DYHLMFLPKCLKEYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDY 296
Query: 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQE 358
ARHFVSACTRILG EGTPEGVEDQGRLTRVAAFPIGIDS+RFIRALE+ V H+KEL+E
Sbjct: 297 ARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKE 356
Query: 359 TFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRL 418
FAGRKVMLGVDRLDMIKGIPQK+LAFEKFLEEN++WR KVVLLQIAVPTRTDVPEYQ+L
Sbjct: 357 RFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKL 416
Query: 419 TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 478
TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF ALCALYAVTDVALVTSLRDGMNLVSYE
Sbjct: 417 TSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYE 476
Query: 479 FVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 538
FVACQ+ KKGVLILSEFAGAAQSLGAGAILVNPWNITEVA +I +ALNM+ EEREKRH H
Sbjct: 477 FVACQEAKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRH 536
Query: 539 NFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGF 598
NF HV THTAQEWAETFVSELNDTV+EAQLRI +VPP L + D+I+RY +SNNRLLILGF
Sbjct: 537 NFHHVKTHTAQEWAETFVSELNDTVIEAQLRISKVPPELPQHDAIQRYSKSNNRLLILGF 596
Query: 599 NATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658
NATLTEPVD GRRGDQI+EM+L LHP+LK PL ALC DP TTIVVLSGS R+VLDKNF
Sbjct: 597 NATLTEPVDNQGRRGDQIKEMDLNLHPELKGPLKALCSDPSTTIVVLSGSSRSVLDKNFG 656
Query: 659 EYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSL 718
EY++WLAAENGMFLR T G+WMTTMPEHLNMEWVDS+KHVF+YFTERTPRSHFE R+TSL
Sbjct: 657 EYDMWLAAENGMFLRLTNGEWMTTMPEHLNMEWVDSVKHVFKYFTERTPRSHFETRDTSL 716
Query: 719 VWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILA 778
+WNYKYAD+EFGR+QARD+LQHLWTGPISNASV+VVQGS+SVEVRAVGVTKGAAIDRIL
Sbjct: 717 IWNYKYADIEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILG 776
Query: 779 EIVHSKKMKTAIDYVLCIGHFLGKN 803
EIVHSK M T IDYVLCIGHFLGK+
Sbjct: 777 EIVHSKSMTTPIDYVLCIGHFLGKD 801
|
|
| TAIR|locus:2137712 TPS4 "trehalose-6-phosphatase synthase S4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2420 (856.9 bits), Expect = 2.7e-251, P = 2.7e-251
Identities = 463/722 (64%), Positives = 561/722 (77%)
Query: 92 SRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIG 151
+R RLLVV+ LPV+A R GE+SWS +S GGLVSALLG+KEFE +WIGW GV+V D IG
Sbjct: 2 ARPRLLVVSMSLPVTAKRTGEESWSFTMSPGGLVSALLGLKEFETKWIGWPGVDVHDAIG 61
Query: 152 QKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQF 211
+K L+ LAEK CIPVFL+E + QYYNGYCNNILWP+FHYLG P E R T ++QSQ+
Sbjct: 62 KKTLSITLAEKGCIPVFLEE-VCDQYYNGYCNNILWPIFHYLGTPPEYRNDATITYQSQY 120
Query: 212 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI 271
AY KANQ+F DVV +HY++GDVVWCHDYH+M LP+ LKEYNS MKVGWFLHTPFPSSE+
Sbjct: 121 EAYKKANQIFFDVVKEHYEEGDVVWCHDYHVMLLPQYLKEYNSKMKVGWFLHTPFPSSEM 180
Query: 272 HRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAF 331
++TLP GFHTYD+ARHF++AC ILG E T EG+ DQG++TRVA F
Sbjct: 181 YKTLPSRSDLLRSVLTADLVGFHTYDFARHFLNACMCILGVEATSEGIVDQGKVTRVAVF 240
Query: 332 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEE 391
PIGI+ ERFI E++ V ++K+ + F GRK++LGVDRLD IKGIPQK AFEKFLEE
Sbjct: 241 PIGIEPERFINTSELSEVVQYMKKFKNDFGGRKLILGVDRLDTIKGIPQKYQAFEKFLEE 300
Query: 392 NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFP 451
N++WRGKV+LLQIAVPTR + EYQ++ Q H VGRINGRFG++++VPI HLD S+DF
Sbjct: 301 NAEWRGKVMLLQIAVPTRNGIGEYQKIKDQCHYHVGRINGRFGSISSVPIIHLDCSIDFN 360
Query: 452 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNP 511
LCALYA+TDV LVTSLRDGMNLVS EF+ACQ +KGVLILSEFAGA QSLGAGAILVNP
Sbjct: 361 QLCALYAITDVLLVTSLRDGMNLVSSEFIACQKAEKGVLILSEFAGAGQSLGAGAILVNP 420
Query: 512 WNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV---------SELNDT 562
WNI EV++AI ALNMS EE+E++H NF +V TH+ Q+WA+ F+ S+L +
Sbjct: 421 WNIKEVSSAIGEALNMSHEEKERKHKINFQYVKTHSTQQWADDFMKLTLTNILCSKLIEI 480
Query: 563 VVEAQLRIKQVPP-SLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMEL 621
A+L L E D I++Y +SNNRLLILGF TLT+P+ RRGD M L
Sbjct: 481 TTSAELGAGLAATLELPEHDVIQQYSKSNNRLLILGFYGTLTQPMKNQERRGDG---MNL 537
Query: 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMT 681
+LHP LK+ L LC DPKTT+VVLS S++ +LDKNF EYN+WLAAENGMFLR T+G+W+T
Sbjct: 538 ELHPQLKERLKELCSDPKTTVVVLSRSEKCILDKNFGEYNMWLAAENGMFLRHTSGEWVT 597
Query: 682 TMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHL 741
+PEH+N+EW+D +KHVF+YFTERTP S+ E E SLVWNY+ AD EFGR QARDMLQHL
Sbjct: 598 RIPEHMNLEWIDGVKHVFKYFTERTPGSYLETSEASLVWNYENADAEFGRAQARDMLQHL 657
Query: 742 WTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG 801
W GPISNASV+VV+G +SVEV AVGVTKG+A++RIL EIVH+K M T IDYVLCIG FLG
Sbjct: 658 WAGPISNASVDVVRGGQSVEVHAVGVTKGSAMERILGEIVHNKSMATPIDYVLCIGCFLG 717
Query: 802 KN 803
K+
Sbjct: 718 KD 719
|
|
| DICTYBASE|DDB_G0287657 tpsA "alpha,alpha-trehalose-phosphate synthase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1433 (509.5 bits), Expect = 1.0e-146, P = 1.0e-146
Identities = 295/701 (42%), Positives = 425/701 (60%)
Query: 80 NEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWI 139
NE L+ T RL+VV+NRLPVS + WS ++S+GGLV+AL G+K W+
Sbjct: 2 NENDNNLENETGFSGRLIVVSNRLPVSIKKESNGKWSCKMSSGGLVAALSGLKS-NFIWV 60
Query: 140 GWAGVNVPDEIGQKALTKAL-AEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYL--GLP 196
GW G + +E +K + + L + CIPVFL E + +++YNG+ N +LWPLFHYL L
Sbjct: 61 GWIGAEI-EEDDRKEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHYLPGDLD 119
Query: 197 QEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDM 256
+DR+ + +Y++AN+ F+ VV + K D+VW HDYH+M LP+ LK+ D
Sbjct: 120 YDDRI---------WNSYVEANEQFSSVVAEILKPNDLVWVHDYHMMLLPEILKQKKPDA 170
Query: 257 KVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGTP 316
++G+FLH PFPSSEI R LP GFHTYDYARHF+ +CTRI+G E P
Sbjct: 171 RIGFFLHIPFPSSEIFRVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAP 230
Query: 317 EGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIK 376
GV + R +V FP+GID ++F +L+ VQ IKEL+E+F G KV++G+DRLD IK
Sbjct: 231 NGVYFKDRFVQVGVFPVGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIK 290
Query: 377 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 436
GIPQKL A E+ ++ +W+GK+VL+Q+AVP+R DV EYQ+L +V E+VGRING +G++
Sbjct: 291 GIPQKLQAIERLFQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSI 350
Query: 437 TAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA 496
PIH+L +S+D L ALY ++D AL+TS+RDGMNLV+ E++ CQ GVLILSEF
Sbjct: 351 GYSPIHYLFQSVDPSELTALYNISDAALITSIRDGMNLVAQEYIVCQTENNGVLILSEFT 410
Query: 497 GAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 556
GAAQSL +GA+++NPWN EVA++I +L M PEERE++H +VT HTA W FV
Sbjct: 411 GAAQSL-SGAVMINPWNTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHWGLGFV 469
Query: 557 SELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQI 616
ELN + + + ++ Y +S RLLI ++ TL + P Q+
Sbjct: 470 KELNKASSNTDKMVTIQKLDIEKV--VDIYKQSKRRLLIFAYDGTLIPYNNVP-----QL 522
Query: 617 REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTT 676
+L + L +DPKT + +LSG D+ L + F + L+AE G F +
Sbjct: 523 SRPS----QELLNSFDILSNDPKTDVYILSGRDKKTLSEWFLGIQIGLSAEYGCFFKLPE 578
Query: 677 G-KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQAR 735
+W +P +++ W ++++ +F+YFT RTP S FE++E W+Y+ AD FG IQAR
Sbjct: 579 STEWEQQVPS-MDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHYRNADPIFGSIQAR 637
Query: 736 DMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRI 776
++ HL P+ + G +S + + K D I
Sbjct: 638 ELHLHLDNLPLDVIVGDKTLGVRSYNINPLSSMKKVITDTI 678
|
|
| UNIPROTKB|G4NHF4 MGG_03860 "Alpha,alpha-trehalose-phosphate synthase 1" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 1166 (415.5 bits), Expect = 2.0e-118, P = 2.0e-118
Identities = 236/472 (50%), Positives = 318/472 (67%)
Query: 95 RLLVVANRLPVSAIRRGEDS-WSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQ 152
RLL+++NRLP++ I+R +D +S +S+GGLV+ L G+ K +W GW G+ VPD
Sbjct: 15 RLLLISNRLPIT-IKRSDDGQYSFSMSSGGLVTGLSGLAKTTSFQWYGWPGLEVPDAEAG 73
Query: 153 KALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFA 212
+ + E PVF+D+++ ++YNG+ N+ILWPLFHY P E +S ++
Sbjct: 74 PVVQRLKNEYGAHPVFVDDELADRHYNGFANSILWPLFHYH--PGEITFD-----ESAWS 126
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSD----MKVGWFLHTPFPS 268
AY + N++FA V K +DGD++W HDYHLM LP+ L+E D +K+G+FLHTPFPS
Sbjct: 127 AYKEVNRLFAQTVVKDVQDGDMIWVHDYHLMLLPEMLREEIGDSKKNVKIGFFLHTPFPS 186
Query: 269 SEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRV 328
SEI+R LP GFHTYDYARHF+S+C+RIL TP GV+ GR V
Sbjct: 187 SEIYRILPVRQALLQGVLHCDLLGFHTYDYARHFLSSCSRILSAPTTPNGVQFAGRFVTV 246
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
AFPIGID E+F+ L+ VQ I L F G K+++GVDRLD IKG+PQKL A E F
Sbjct: 247 GAFPIGIDPEKFVEGLQKPKVQQRIAALTRKFEGVKLIVGVDRLDYIKGVPQKLHALEVF 306
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448
L E+ +W GK+VL+Q+AVP+R DV EYQ L + V+E+VGRING+FGT+ +PIH L +S+
Sbjct: 307 LTEHPEWIGKIVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTIEFMPIHFLHQSV 366
Query: 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 508
F L ALYAV+DV LV+S RDGMNLVSYE++A Q + GV+ILSEF GAAQSL +G+++
Sbjct: 367 SFDELAALYAVSDVCLVSSTRDGMNLVSYEYIATQRDRHGVMILSEFTGAAQSL-SGSLI 425
Query: 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560
VNPWN E+ANAI A+ M PE+RE +V +T+ W +FV+ELN
Sbjct: 426 VNPWNTEELANAIHDAVTMGPEQREANFKKLERYVFKYTSAWWGSSFVAELN 477
|
|
| POMBASE|SPAC328.03 tps1 "alpha,alpha-trehalose-phosphate synthase [UDP-forming]" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 1165 (415.2 bits), Expect = 2.6e-118, P = 2.6e-118
Identities = 235/488 (48%), Positives = 319/488 (65%)
Query: 77 STPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEA 136
S ++ + L G + +RL+VV+NRLP++ R+ ++ +S+GGLVSAL G+K+
Sbjct: 2 SDAHDTIKSLTGDASNSRRLIVVSNRLPITIKRKDNGTYDFSMSSGGLVSALSGLKKLMT 61
Query: 137 -RWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGL 195
+W+GW G +P++ + + E IPVFLD++ ++YNG+ N+ILWPLFHY
Sbjct: 62 FQWLGWCGQEIPEDEKPMIIQRLQDECSAIPVFLDDETADRHYNGFSNSILWPLFHYH-- 119
Query: 196 PQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSD 255
P E + + AY AN FA+ + K+ +DGD++W DYHLM LP+ L+E D
Sbjct: 120 PGEINFD-----EENWEAYRAANYAFAEAIVKNLQDGDLIWVQDYHLMVLPQMLRELIGD 174
Query: 256 ----MKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILG 311
+K+G+FLHTPFPSSEI+R LP GFHTYDYARHF+SAC+RIL
Sbjct: 175 KFKDIKIGFFLHTPFPSSEIYRVLPVRNEILEGVLNCDLVGFHTYDYARHFLSACSRILN 234
Query: 312 FEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR 371
P GVE G++ V FPIGID E+F AL+ + V+ I ++ G KV++GVDR
Sbjct: 235 LSTLPNGVEYNGQMVSVGTFPIGIDPEKFSDALKSDVVKDRIASIERRLQGVKVIVGVDR 294
Query: 372 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING 431
LD IKG+PQK AFE FLE+ +W GKVVL+Q+AVP+R DV EYQ L + V+E+VGRING
Sbjct: 295 LDYIKGVPQKFHAFEVFLEQYPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRING 354
Query: 432 RFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 491
RFGT+ PIH L +S+ F L ALY V+DV L+TS RDGMNLVSYE++ Q + G LI
Sbjct: 355 RFGTVEYTPIHFLHKSVRFEELVALYNVSDVCLITSTRDGMNLVSYEYICTQQERHGALI 414
Query: 492 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEW 551
LSEFAGAAQSL G+I++NPWN E+AN+I AL M ++RE F +V +T+Q W
Sbjct: 415 LSEFAGAAQSLN-GSIVINPWNTEELANSIHDALTMPEKQREANENKLFRYVNKYTSQFW 473
Query: 552 AETFVSEL 559
++FV EL
Sbjct: 474 GQSFVGEL 481
|
|
| ASPGD|ASPL0000027021 tpsA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 1159 (413.0 bits), Expect = 1.1e-117, P = 1.1e-117
Identities = 238/491 (48%), Positives = 326/491 (66%)
Query: 92 SRQRLLVVANRLPVSAIRRGEDS-WSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDE 149
+ RLL+V+NRLP++ I+R ED + +S+GGLVS L G+ K +W GW G+ VP+E
Sbjct: 10 NESRLLLVSNRLPIT-IKRSEDGKYDFSMSSGGLVSGLSGLSKTTTFQWYGWPGLEVPEE 68
Query: 150 IGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQS 209
+ E IPVF+D+++ ++YNG+ N+ILWPLFHY P E +S
Sbjct: 69 EIPTLKNRLKEEYNAIPVFIDDELADRHYNGFSNSILWPLFHYH--PGEITFD-----ES 121
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY--NS--DMKVGWFLHTP 265
+ AY +AN++FA V +DGD++W HDYHLM LP+ L+E N+ ++K+G+FLHTP
Sbjct: 122 AWEAYKEANRLFAQAVASQVQDGDLIWVHDYHLMLLPEMLREEIGNTKKNIKIGFFLHTP 181
Query: 266 FPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRL 325
FPSSEI+R LP GFHTYDY RHF+SAC+R+LG TP G+E QG++
Sbjct: 182 FPSSEIYRILPVRNELLLGLLHCDLIGFHTYDYTRHFLSACSRLLGLPTTPNGIEFQGKI 241
Query: 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAF 385
AFPIGID E+F L+ VQ I L++ F G K+M+GVDRLD IKG+PQKL A
Sbjct: 242 IACGAFPIGIDPEKFKEGLKKEKVQKRIATLEQKFQGVKLMVGVDRLDYIKGVPQKLHAL 301
Query: 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD 445
E FL ++ +W GKVVL+Q+AVP+R DV EYQ L + V+E+VGRING+FGT+ +PIH L
Sbjct: 302 EVFLSDHPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTVEFMPIHFLH 361
Query: 446 RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAG 505
+S++F L ALYAV+D +V+S RDGMNLVSYE++A Q+ + G L+LSEFAGAAQSL G
Sbjct: 362 KSVNFDELIALYAVSDACVVSSTRDGMNLVSYEYIATQEKRHGSLVLSEFAGAAQSLN-G 420
Query: 506 AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565
+I+VNPWN E+A A A+ MS E+R +V +T+ W ++FV+EL +
Sbjct: 421 SIIVNPWNTEELAAAYHEAVTMSDEQRALNFSKLDKYVNKYTSAFWGQSFVTELTRISEQ 480
Query: 566 A--QLRIKQVP 574
A +L K+ P
Sbjct: 481 AAGKLPTKETP 491
|
|
| SGD|S000000330 TPS1 "Synthase subunit of trehalose-6-P synthase/phosphatase complex" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 1159 (413.0 bits), Expect = 1.1e-117, P = 1.1e-117
Identities = 233/476 (48%), Positives = 321/476 (67%)
Query: 96 LLVVANRLPVSAIRRGEDS-WSLEISAGGLVSALLGVKE-FEARWIGWAGVNVPDEIGQK 153
++VV+NRLPV+ + + +S+GGLV+AL G+K+ + +W GW G+ +PD+ +
Sbjct: 18 IIVVSNRLPVTITKNSSTGQYEYAMSSGGLVTALEGLKKTYTFKWFGWPGLEIPDD-EKD 76
Query: 154 ALTKALAEK-RCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFA 212
+ K L EK +P+FL ++I +YNG+ N+ILWPLFHY P E ++ +
Sbjct: 77 QVRKDLLEKFNAVPIFLSDEIADLHYNGFSNSILWPLFHYH--PGEINFD-----ENAWL 129
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLK-----EYNSDMKVGWFLHTPFP 267
AY +ANQ F + + K D++W HDYHLM +P+ L+ + ++KVGWFLHTPFP
Sbjct: 130 AYNEANQTFTNEIAKTMNHNDLIWVHDYHLMLVPEMLRVKIHEKQLQNVKVGWFLHTPFP 189
Query: 268 SSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTR 327
SSEI+R LP GFHTYDYARHF+S+ R+L P GVE QGR
Sbjct: 190 SSEIYRILPVRQEILKGVLSCDLVGFHTYDYARHFLSSVQRVLNVNTLPNGVEYQGRFVN 249
Query: 328 VAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEK 387
V AFPIGID ++F L+ VQ I++L+ETF G K+++GVDRLD IKG+PQKL A E
Sbjct: 250 VGAFPIGIDVDKFTDGLKKESVQKRIQQLKETFKGCKIIVGVDRLDYIKGVPQKLHAMEV 309
Query: 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS 447
FL E+ +WRGKVVL+Q+AVP+R DV EYQ L S V+E+VGRING+FGT+ VPIH + +S
Sbjct: 310 FLNEHPEWRGKVVLVQVAVPSRGDVEEYQYLRSVVNELVGRINGQFGTVEFVPIHFMHKS 369
Query: 448 LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAI 507
+ F L +LYAV+DV LV+S RDGMNLVSYE++ACQ+ KKG LILSEF GAAQSL GAI
Sbjct: 370 IPFEELISLYAVSDVCLVSSTRDGMNLVSYEYIACQEEKKGSLILSEFTGAAQSLN-GAI 428
Query: 508 LVNPWNITEVANAIARALNMSPEEREKRHWHN-FTHVTTHTAQEWAETFVSELNDT 562
+VNPWN ++++AI AL + P+ +++ +W + +++ +T+ W E FV EL T
Sbjct: 429 IVNPWNTDDLSDAINEALTL-PDVKKEVNWEKLYKYISKYTSAFWGENFVHELYST 483
|
|
| CGD|CAL0004028 TPS1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 1147 (408.8 bits), Expect = 2.1e-116, P = 2.1e-116
Identities = 234/481 (48%), Positives = 320/481 (66%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEF-EARWIGWAGVNVPDEIGQK 153
++LVV+NR+PV+ R S+ +S+GGLV+AL G+K+ E +W GW G+ +P++ K
Sbjct: 5 KVLVVSNRIPVTIKRLDNGSYDYSMSSGGLVTALQGLKKTTEFQWYGWPGLEIPEDEQTK 64
Query: 154 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 213
+ ++ C +FL + I +YNG+ N+ILWPLFHY P E ++ +AA
Sbjct: 65 VNDELKSKFNCTAIFLSDTIADLHYNGFSNSILWPLFHYH--PGEMNFD-----ENAWAA 117
Query: 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY----NSDMKVGWFLHTPFPSS 269
YI+AN+ FA + K D D++W HDYHLM LP+ L++ ++K+G+FLHTPFPSS
Sbjct: 118 YIEANKKFALEIVKQVNDDDMIWVHDYHLMLLPEMLRQEIGNKKKNIKIGFFLHTPFPSS 177
Query: 270 EIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGT-PEGVEDQGRLTRV 328
EI+R LP GFHTYDYARHF+S+ +RI+ T P G++ QGR +
Sbjct: 178 EIYRILPVRKEILEGVLSCDLIGFHTYDYARHFISSVSRIVPNVSTLPNGIKYQGRSISI 237
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
AFPIGID + FI L+ + V IK+L+ F KV++GVDRLD IKG+PQKL AFE F
Sbjct: 238 GAFPIGIDVDNFIDGLKKDSVVERIKQLKSKFKDVKVIVGVDRLDYIKGVPQKLHAFEVF 297
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448
L EN +W GKVVL+Q+AVP+R DV EYQ L S V E+VGRING FGT+ VPIH+L +S+
Sbjct: 298 LNENPEWIGKVVLVQVAVPSRGDVEEYQSLRSTVSELVGRINGEFGTVEFVPIHYLHKSI 357
Query: 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 508
F L +LY ++DV LV+S RDGMNLVSYE++ACQ +KGVLILSEFAGAAQSL GA++
Sbjct: 358 PFDELISLYNISDVCLVSSTRDGMNLVSYEYIACQQDRKGVLILSEFAGAAQSLN-GALI 416
Query: 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQL 568
VNPWN +++ AI +L + E+RE FT+++ +T+ W E+FV EL + L
Sbjct: 417 VNPWNTEDLSEAIKESLTLPEEKREFNFKKLFTYISKYTSGFWGESFVKELYKCNPQKSL 476
Query: 569 R 569
R
Sbjct: 477 R 477
|
|
| UNIPROTKB|Q92410 TPS1 "Alpha,alpha-trehalose-phosphate synthase [UDP-forming]" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 1147 (408.8 bits), Expect = 2.1e-116, P = 2.1e-116
Identities = 234/481 (48%), Positives = 320/481 (66%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEF-EARWIGWAGVNVPDEIGQK 153
++LVV+NR+PV+ R S+ +S+GGLV+AL G+K+ E +W GW G+ +P++ K
Sbjct: 5 KVLVVSNRIPVTIKRLDNGSYDYSMSSGGLVTALQGLKKTTEFQWYGWPGLEIPEDEQTK 64
Query: 154 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 213
+ ++ C +FL + I +YNG+ N+ILWPLFHY P E ++ +AA
Sbjct: 65 VNDELKSKFNCTAIFLSDTIADLHYNGFSNSILWPLFHYH--PGEMNFD-----ENAWAA 117
Query: 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY----NSDMKVGWFLHTPFPSS 269
YI+AN+ FA + K D D++W HDYHLM LP+ L++ ++K+G+FLHTPFPSS
Sbjct: 118 YIEANKKFALEIVKQVNDDDMIWVHDYHLMLLPEMLRQEIGNKKKNIKIGFFLHTPFPSS 177
Query: 270 EIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEGT-PEGVEDQGRLTRV 328
EI+R LP GFHTYDYARHF+S+ +RI+ T P G++ QGR +
Sbjct: 178 EIYRILPVRKEILEGVLSCDLIGFHTYDYARHFISSVSRIVPNVSTLPNGIKYQGRSISI 237
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
AFPIGID + FI L+ + V IK+L+ F KV++GVDRLD IKG+PQKL AFE F
Sbjct: 238 GAFPIGIDVDNFIDGLKKDSVVERIKQLKSKFKDVKVIVGVDRLDYIKGVPQKLHAFEVF 297
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448
L EN +W GKVVL+Q+AVP+R DV EYQ L S V E+VGRING FGT+ VPIH+L +S+
Sbjct: 298 LNENPEWIGKVVLVQVAVPSRGDVEEYQSLRSTVSELVGRINGEFGTVEFVPIHYLHKSI 357
Query: 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 508
F L +LY ++DV LV+S RDGMNLVSYE++ACQ +KGVLILSEFAGAAQSL GA++
Sbjct: 358 PFDELISLYNISDVCLVSSTRDGMNLVSYEYIACQQDRKGVLILSEFAGAAQSLN-GALI 416
Query: 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQL 568
VNPWN +++ AI +L + E+RE FT+++ +T+ W E+FV EL + L
Sbjct: 417 VNPWNTEDLSEAIKESLTLPEEKREFNFKKLFTYISKYTSGFWGESFVKELYKCNPQKSL 476
Query: 569 R 569
R
Sbjct: 477 R 477
|
|
| TAIR|locus:2199847 TPS9 "trehalose-phosphatase/synthase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 794 (284.6 bits), Expect = 3.7e-116, Sum P(2) = 3.7e-116
Identities = 187/519 (36%), Positives = 284/519 (54%)
Query: 65 PSIVDEDLEGPASTPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDS-WSLEISAGG 123
P I+ E L+G S +G ++ SR+R ++VAN LP+ A R E W
Sbjct: 34 PGIISE-LDGGYS---DGSSDVNSSNSSRERKIIVANMLPLQAKRDTETGQWCFSWDEDS 89
Query: 124 LVSALL-GVK-EFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGY 181
L+ L G + E +IG ++ ++ K L + C+P FL +++ ++Y G+
Sbjct: 90 LLLQLRDGFSSDTEFVYIGSLNADIGISEQEEVSHKLLLDFNCVPTFLPKEMQEKFYLGF 149
Query: 182 CNNILWPLFHYLGLPQ-EDRLATTRSFQSQFAAYIKANQMFAD-VVNKHYKDGDVVWCHD 239
C + LWPLFHY+ LP D R + + AY+ AN++F+D V+ + D VW HD
Sbjct: 150 CKHHLWPLFHYM-LPMFPDH--GDRFDRRLWQAYVSANKIFSDRVMEVINPEEDYVWIHD 206
Query: 240 YHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYA 299
YHLM LP L++ + +K+G+FLH+PFPSSEI+RTLP GFHT+DYA
Sbjct: 207 YHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDDLLRGLLNCDLIGFHTFDYA 266
Query: 300 RHFVSACTRILGFEGTPE----GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKE 355
RHF+S C+R+LG + + G++ GR + P+GI R L + +KE
Sbjct: 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFIKILPVGIHMGRLESVLNLPSTAAKMKE 326
Query: 356 LQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEY 415
+QE F G+K++LGVD +D+ KGI KL+A E+ E RGK+VL+QI P R +
Sbjct: 327 IQEQFKGKKLILGVDDMDIFKGISLKLIAMERLFETYWHMRGKLVLIQIVNPARATGKDV 386
Query: 416 QRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLV 475
+ + + RIN R+G+ P+ +DR + A YA+ D LV ++RDGMNLV
Sbjct: 387 EEAKKETYSTAKRINERYGSAGYQPVILIDRLVPRYEKTAYYAMADCCLVNAVRDGMNLV 446
Query: 476 SYEFVACQ------DLKKGV---------LILSEFAGAAQSLGAGAILVNPWNITEVANA 520
Y+++ C+ D G+ L++SEF G + SL +GAI VNPW++ VA A
Sbjct: 447 PYKYIICRQGTPGMDKAMGISHDSARTSMLVVSEFIGCSPSL-SGAIRVNPWDVDAVAEA 505
Query: 521 IARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559
+ AL M E+ RH ++ +V+TH WA++F+ +L
Sbjct: 506 VNLALTMGETEKRLRHEKHYHYVSTHDVGYWAKSFMQDL 544
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9SYM4 | TPS1_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.8310 | 0.9334 | 0.8481 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.983 |
| 4th Layer | 2.4.1.15 | 0.979 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 856 | |||
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 0.0 | |
| PLN03063 | 797 | PLN03063, PLN03063, alpha,alpha-trehalose-phosphat | 0.0 | |
| TIGR02400 | 456 | TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-p | 0.0 | |
| pfam00982 | 470 | pfam00982, Glyco_transf_20, Glycosyltransferase fa | 0.0 | |
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 0.0 | |
| cd03788 | 460 | cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase ( | 0.0 | |
| COG0380 | 486 | COG0380, OtsA, Trehalose-6-phosphate synthase [Car | 0.0 | |
| PLN02205 | 854 | PLN02205, PLN02205, alpha,alpha-trehalose-phosphat | 1e-147 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 5e-86 | |
| TIGR02398 | 487 | TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosph | 4e-82 | |
| pfam02358 | 235 | pfam02358, Trehalose_PPase, Trehalose-phosphatase | 2e-68 | |
| COG1877 | 266 | COG1877, OtsB, Trehalose-6-phosphatase [Carbohydra | 2e-25 | |
| TIGR00685 | 244 | TIGR00685, T6PP, trehalose-phosphatase | 6e-12 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 2e-06 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 7e-06 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 7e-04 | |
| cd03792 | 372 | cd03792, GT1_Trehalose_phosphorylase, Trehalose ph | 0.001 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 1676 bits (4343), Expect = 0.0
Identities = 690/806 (85%), Positives = 738/806 (91%), Gaps = 6/806 (0%)
Query: 1 MPGNSYNSNSSNIPPDRVTRLVREKIERDLRKSSRASHPNDVTD-NGGREVFEDEQRLRD 59
MPGN YN SS P RV RL+RE R+LRKS R+S+ ND D N G E FE++ RL +
Sbjct: 1 MPGNKYNGQSSVNPTSRVERLLRE---RELRKSERSSNANDDLDTNAGSEAFENDLRLSE 57
Query: 60 GDNLGPSIVDEDLEGPA--STPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSL 117
GDN S V++ LEG A S +GCER +GR RQRLLVVANRLPVSA+RRGEDSWSL
Sbjct: 58 GDNDSSSHVEQLLEGAAAESALPDGCERQEGRRPLRQRLLVVANRLPVSAVRRGEDSWSL 117
Query: 118 EISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQY 177
EISAGGLVSALLGVKEFEARWIGWAGVNVPDE+GQKALTKALAEKRCIPVFLDE+IVHQY
Sbjct: 118 EISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTKALAEKRCIPVFLDEEIVHQY 177
Query: 178 YNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWC 237
YNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAY KANQMFADVVN+HY++GDVVWC
Sbjct: 178 YNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWC 237
Query: 238 HDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYD 297
HDYHLMFLPKCLKEYNS+MKVGWFLHTPFPSSEIHRTLPSRS+LLR+VLAADLVGFHTYD
Sbjct: 238 HDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYD 297
Query: 298 YARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQ 357
YARHFVSACTRILG EGTPEGVEDQGRLTRVAAFPIGIDS+RFIRALE VQ HIKEL+
Sbjct: 298 YARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELK 357
Query: 358 ETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQR 417
E FAGRKVMLGVDRLDMIKGIPQK+LAFEKFLEEN +WR KVVLLQIAVPTRTDVPEYQ+
Sbjct: 358 ERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQK 417
Query: 418 LTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSY 477
LTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF ALCALYAVTDVALVTSLRDGMNLVSY
Sbjct: 418 LTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSY 477
Query: 478 EFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHW 537
EFVACQD KKGVLILSEFAGAAQSLGAGAILVNPWNITEVA +IA+ALNM EEREKRH
Sbjct: 478 EFVACQDSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHR 537
Query: 538 HNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILG 597
HNF HVTTHTAQEWAETFVSELNDTVVEAQLR +QVPP L D+I+RYL+SNNRLLILG
Sbjct: 538 HNFMHVTTHTAQEWAETFVSELNDTVVEAQLRTRQVPPQLPPEDAIQRYLQSNNRLLILG 597
Query: 598 FNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 657
FNATLTEPVDTPGRRGDQI+EMEL+LHP+LK+PL ALC DPKTTIVVLSGSDR+VLD+NF
Sbjct: 598 FNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENF 657
Query: 658 QEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS 717
E+++WLAAENGMFLR T G+WMTTMPEHLNM+WVDS+KHVFEYFTERTPRSHFE RETS
Sbjct: 658 GEFDMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFETRETS 717
Query: 718 LVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRIL 777
LVWNYKYADVEFGR+QARDMLQHLWTGPISNA+V+VVQGS+SVEVR VGVTKGAAIDRIL
Sbjct: 718 LVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRIL 777
Query: 778 AEIVHSKKMKTAIDYVLCIGHFLGKN 803
EIVHSK M T IDYVLCIGHFLGK+
Sbjct: 778 GEIVHSKSMTTPIDYVLCIGHFLGKD 803
|
Length = 934 |
| >gnl|CDD|215555 PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 1308 bits (3386), Expect = 0.0
Identities = 532/756 (70%), Positives = 630/756 (83%), Gaps = 10/756 (1%)
Query: 93 RQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQ 152
R RLLVVANRLPVSA R GEDSWSLE+S GGLVSALLGVKEFE +WIGW GV+V DEIG+
Sbjct: 10 RPRLLVVANRLPVSAKRTGEDSWSLEMSPGGLVSALLGVKEFETKWIGWPGVDVHDEIGK 69
Query: 153 KALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFA 212
ALT++LAEK CIPVFL+ ++ QYYNGYCNNILWP+FHY+GLPQEDR TR+F+SQ+
Sbjct: 70 AALTESLAEKGCIPVFLN-EVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYD 128
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIH 272
AY KAN+MF DVV ++Y++GDVVWCHDYHLMFLP+ LKEYN+ MKVGWFLHTPFPSSEI+
Sbjct: 129 AYKKANRMFLDVVKENYEEGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSEIY 188
Query: 273 RTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP 332
+TLPSRS+LLRAVL ADL+GFHTYD+ARHF+SACTRILG EGT EGV DQG++TRVA FP
Sbjct: 189 KTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFP 248
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
IGID ERFI E+ V+ H+KEL+ FAGRKV+LGVDRLDMIKGIPQK LAFEKFLEEN
Sbjct: 249 IGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEEN 308
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
+WR KV+L+QIAVPTR DVPEYQ+L SQVHE+VGRINGRFG++++VPIHHLD S+DF
Sbjct: 309 PEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNY 368
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW 512
LCALYA+TDV LVTSLRDGMNLVSYEFVACQ KKGVL+LSEFAGA QSLGAGA+LVNPW
Sbjct: 369 LCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSLGAGALLVNPW 428
Query: 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQ 572
NITEV++AI ALNMS EERE RH HNF +V TH+AQ+WA+ F+SELND +VEA+LR +
Sbjct: 429 NITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTRN 488
Query: 573 VPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLN 632
+P L E D I++Y +SNNRLLILGF TLTEP R QI+EM+L LHP+LK+ L
Sbjct: 489 IPLELPEQDVIQQYSKSNNRLLILGFYGTLTEP------RNSQIKEMDLGLHPELKETLK 542
Query: 633 ALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWV 692
ALC DPKTT+VVLS S +++LDKNF EYN+WLAAENGMFLR T+G+W+TTMPEH+N++WV
Sbjct: 543 ALCSDPKTTVVVLSRSGKDILDKNFGEYNIWLAAENGMFLRHTSGEWVTTMPEHMNLDWV 602
Query: 693 DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVE 752
D +K+VF+YFT+RTPRS+ E+ ETSLVWNY+YADVEFGR QARDMLQHLW GPISNASV+
Sbjct: 603 DGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVD 662
Query: 753 VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLM 812
VV+G KSVEV A+GVTKGAAI RIL EIVH+K M T ID+V C G+FL K+ ++ F
Sbjct: 663 VVRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEP 722
Query: 813 QTISTVRLDSSFLHYLRMKMCMRFL---SQNYLMMA 845
+ +S + SS K+ + +NY A
Sbjct: 723 EILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCA 758
|
Length = 797 |
| >gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 721 bits (1863), Expect = 0.0
Identities = 257/469 (54%), Positives = 315/469 (67%), Gaps = 15/469 (3%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKE-FEARWIGWAGVNVPDEIGQK 153
RL+VV+NRLPV R G LE SAGGL ALLG + W GW+G V ++ G+
Sbjct: 1 RLIVVSNRLPVPITRGG-----LEPSAGGLAVALLGALKATGGVWFGWSGKTVEEDEGEP 55
Query: 154 ALTKALAEK-RCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFA 212
L L K PVFL E+ V YYNG+ N+ LWPLFHY P R +
Sbjct: 56 FLRTELEGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYR--PDLIRYDRK-----AWE 108
Query: 213 AYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIH 272
AY + N++FA+ + + GD+VW HDYHLM LP L+E K+G+FLH PFPSSEI+
Sbjct: 109 AYRRVNRLFAEALAPLLQPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSEIY 168
Query: 273 RTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP 332
RTLP R +LL +LA DLVGF TYD AR+F+SA +R LG E P GVE GR RV AFP
Sbjct: 169 RTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFP 228
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
IGID +RF + VQ I EL+E+ GRK+++GVDRLD KG+P++LLAFE+FLEE+
Sbjct: 229 IGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEH 288
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
+WRGKVVL+QIAVP+R DVPEYQ+L QV E+VGRINGRFGTL PI +L+RS D
Sbjct: 289 PEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREE 348
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW 512
L ALY DV LVT LRDGMNLV+ E+VA QD K GVLILSEFAGAAQ L GA+LVNP+
Sbjct: 349 LMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN-GALLVNPY 407
Query: 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561
+I +A+AIARAL M EERE+RH + + Q W E F+S+LN
Sbjct: 408 DIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLNS 456
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. Length = 456 |
| >gnl|CDD|216227 pfam00982, Glyco_transf_20, Glycosyltransferase family 20 | Back alignment and domain information |
|---|
Score = 716 bits (1851), Expect = 0.0
Identities = 280/474 (59%), Positives = 350/474 (73%), Gaps = 10/474 (2%)
Query: 94 QRLLVVANRLPVSAIRR--GEDSWSLEISAGGLVSALLGVKE-FEARWIGWAGVNVPDEI 150
RL+VV+NRLPV+A R G+ +S+++S+GGLVSAL G+ E E W+GW GV V ++
Sbjct: 1 SRLVVVSNRLPVTAKREEEGKWEFSIKMSSGGLVSALNGLSEATEGVWVGWPGVPVDEDE 60
Query: 151 GQKALTKALAEKR-CIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQS 209
+ +++ L EK C+PVFLD++ V +YYNG+ N+ILWPLFHY P + +S
Sbjct: 61 PKDRVSQLLKEKFTCVPVFLDDEDVDEYYNGFSNSILWPLFHYRLPPNNE----DEFDRS 116
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS 269
+ AY+K N++FAD + + YKDGD++W HDYHLM LP+ L++ D K+G+FLH PFPSS
Sbjct: 117 WWDAYVKVNKLFADKIVEVYKDGDLIWVHDYHLMLLPQMLRKRLPDAKIGFFLHIPFPSS 176
Query: 270 EIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEG-VEDQGRLTRV 328
EI R LP R ++LR +L ADL+GFHTYDYARHF+S C+R+LG E T +G VE GR V
Sbjct: 177 EIFRCLPVREEILRGLLGADLIGFHTYDYARHFLSCCSRLLGLETTSDGGVEYGGRTVSV 236
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEK 387
AFPIGID R L+ VQ +KEL+E F +K++LGVDRLD IKGIPQKLLAFE+
Sbjct: 237 GAFPIGIDPGRIESGLKSPSVQEKVKELKERFGNKKKLILGVDRLDYIKGIPQKLLAFER 296
Query: 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS 447
FLEE +WRGKVVL+QIAVP+R DV EYQ L SQV E+VGRING FGTL P+HHL RS
Sbjct: 297 FLEEYPEWRGKVVLVQIAVPSRGDVEEYQNLRSQVEELVGRINGEFGTLDYTPVHHLHRS 356
Query: 448 LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAI 507
LDF L ALYA+ DV LVTSLRDGMNLV+YE+VACQ +KGVLILSEFAGAAQSL GAI
Sbjct: 357 LDFDELIALYAIADVCLVTSLRDGMNLVAYEYVACQQDRKGVLILSEFAGAAQSLNDGAI 416
Query: 508 LVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561
LVNPW+I EVA AI AL MS EER+KRH F +++ H Q WAE+F+S+L
Sbjct: 417 LVNPWDIEEVAEAINEALTMSEEERQKRHRKLFKYISKHDVQYWAESFLSDLKR 470
|
Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. Length = 470 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 723 bits (1868), Expect = 0.0
Identities = 295/710 (41%), Positives = 421/710 (59%), Gaps = 40/710 (5%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNV---PDEI 150
RL++V+NRLPV+ + R + L S GGL + L + W+GW G+++ +E
Sbjct: 2 RLIIVSNRLPVT-VVREDGGVELTPSVGGLATGLRSFHERGGGLWVGWPGLDLEEESEEQ 60
Query: 151 GQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLG--LPQEDRLATTRSFQ 208
+ + L E +PVFL + V +YY G+CN+ LWPLFHY EDR
Sbjct: 61 RAR-IEPRLEELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTEFEDRF------- 112
Query: 209 SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS 268
+ +Y + NQ FA+ + + GDVVW HDY LM LP L+E D ++G+FLH PFPS
Sbjct: 113 --WESYERVNQRFAEAIAAIARPGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPS 170
Query: 269 SEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRV 328
E+ R LP R ++L +L ADL+GFHTYDY RHF+S+ R+LG+E + GR+ RV
Sbjct: 171 FEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRV 230
Query: 329 AAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
AFP+GID ++F + + VQ I+ L++ GRK++L +DRLD KGIP++LLAFE+F
Sbjct: 231 DAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERF 290
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448
LE+N +WRGKV L+Q+AVP+RT VP+YQ + ++ E+VGRING FGT+ PIH+ RSL
Sbjct: 291 LEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSL 350
Query: 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAIL 508
F L ALY DVALVT LRDGMNLV+ E+VA + GVLILSE AGAA L A A+L
Sbjct: 351 PFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL-AEALL 409
Query: 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQL 568
VNP +I +A AI RAL M EE+ +R + + +WA F+ EL + + +
Sbjct: 410 VNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKA 469
Query: 569 RIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMEL-KLHPDL 627
+ + I RY ++ RLL+L ++ TL P EL +L
Sbjct: 470 FASKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDP----------ELAVPDKEL 519
Query: 628 KQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHL 687
+ L L DP T + ++SG DR+ L++ F + + L AE+G + R G+W + E +
Sbjct: 520 RDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQ--LLEPV 577
Query: 688 NMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPIS 747
EW D+++ + E F +RTP S E++E SL W+Y+ AD E G +A +++ L + +S
Sbjct: 578 ATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILAL-SSLLS 636
Query: 748 NASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797
NA +EV++G+K VEVR GV KG A+ R+L D+VL IG
Sbjct: 637 NAPLEVLRGNKVVEVRPAGVNKGRAVRRLLE--------AGPYDFVLAIG 678
|
Length = 726 |
| >gnl|CDD|99963 cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Score = 660 bits (1706), Expect = 0.0
Identities = 246/468 (52%), Positives = 314/468 (67%), Gaps = 10/468 (2%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQK 153
RL+VV+NRLPVS R G+ + SAGGL +AL G+ K W+GW+G+ +E +
Sbjct: 1 RLVVVSNRLPVSIERDGDGEFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEEDE 60
Query: 154 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 213
T+ L E PVFL + YYNG+ N +LWPLFHY RL R + + A
Sbjct: 61 VSTELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHY-------RLDLARFDREDWEA 113
Query: 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR 273
Y++ N+ FAD + + + GD+VW HDYHL+ LP+ L+E D ++G+FLH PFPSSEI R
Sbjct: 114 YVRVNRKFADAIAEVLRPGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEIFR 173
Query: 274 TLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVED-QGRLTRVAAFP 332
LP R +LLR +L ADL+GF T YAR+F+S C+R+LG E T +G + GR RV AFP
Sbjct: 174 CLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFP 233
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
IGID + F + VQ EL+E GRK+++GVDRLD KGIP++LLAFE+ LE
Sbjct: 234 IGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERY 293
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
+WRGKVVL+QIAVP+RTDVPEYQ L +V E+VGRING+FGTL P+ +L RSL
Sbjct: 294 PEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREE 353
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW 512
L ALY DVALVT LRDGMNLV+ E+VACQD GVLILSEFAGAA+ L GA+LVNP+
Sbjct: 354 LAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEELS-GALLVNPY 412
Query: 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560
+I EVA+AI RAL M EER +RH +V TH Q WA +F+ +L
Sbjct: 413 DIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDLA 460
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. Length = 460 |
| >gnl|CDD|223457 COG0380, OtsA, Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 547 bits (1411), Expect = 0.0
Identities = 233/473 (49%), Positives = 302/473 (63%), Gaps = 15/473 (3%)
Query: 93 RQRLLVVANRLPVSAIRRGEDSWSLEI-SAGGLVSALLGVKE-FEARWIGWAGVNVPDEI 150
RL+VV+NRLPV G+ SAGGLV+AL + WIGW+G P +
Sbjct: 14 DSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLLRVDGGTWIGWSGTTGPTDE 73
Query: 151 GQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHY-LGLPQEDRLATTRSFQS 209
L + + E PV L ++ YYNG+ N ILWPLFHY + +R +
Sbjct: 74 SSDDLKERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFHYFIDDVAYER--------N 125
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS 269
+ AY+K N+ FAD + + Y+ GD++W HDYHL+ +P+ L+E D K+G+FLH PFPSS
Sbjct: 126 WWDAYVKVNRKFADKIVEIYEPGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSS 185
Query: 270 EIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVED--QGRLTR 327
E+ R LP R ++L +L ADL+GF T YAR+F+ C+R+LG G + + GR+ +
Sbjct: 186 EVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVK 245
Query: 328 VAAFPIGIDSERFIRALEINPVQVHIKEL-QETFAGRKVMLGVDRLDMIKGIPQKLLAFE 386
V AFPIGID E F RAL+ VQ + EL E +K+++GVDRLD KGIPQ+LLAFE
Sbjct: 246 VGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFE 305
Query: 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 446
+ LEE +WRGKVVLLQIA P+R DV EYQ L Q+ E+VGRING FG+L+ P+H+L R
Sbjct: 306 RLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHR 365
Query: 447 SLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGA 506
LD L ALY DV LVT LRDGMNLV+ E+VA Q K GVLILSEFAGAA L A
Sbjct: 366 DLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASEL-RDA 424
Query: 507 ILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559
++VNPW+ EVA+AI RAL MS EER++RH V TH WA +F+ +L
Sbjct: 425 LIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDL 477
|
Length = 486 |
| >gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 454 bits (1169), Expect = e-147
Identities = 272/765 (35%), Positives = 411/765 (53%), Gaps = 75/765 (9%)
Query: 83 CERLDGRTFSRQRLLVVANRLPVSAIRR--GEDSWSLEISAGGLVSAL---LGVKEFEAR 137
C + + R+++VAN+LP+ A R+ G W L+ L LG E E
Sbjct: 49 CSDPSSSSVPKDRIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVI 108
Query: 138 WIGWAGVNV-PDEIGQKALTKALAEK-RCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGL 195
++G + +E Q+ +++ L E +C+P FL D+ +YY+G+C LWPLFHY+ L
Sbjct: 109 YVGCLKEEIHLNE--QEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYM-L 165
Query: 196 PQEDRLATTRSFQSQFAAYIKANQMFAD----VVNKHYKDGDVVWCHDYHLMFLPKCLKE 251
P L R +S + AY+ N++FAD V+N + D VW HDYHLM LP L++
Sbjct: 166 PLSPDLGG-RFNRSLWQAYVSVNKIFADRIMEVINP---EDDFVWIHDYHLMVLPTFLRK 221
Query: 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILG 311
+ +K+G+FLH+PFPSSEI++TLP R +LLRA+L +DL+GFHT+DYARHF+S C+R+LG
Sbjct: 222 RFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLG 281
Query: 312 FEGTPE----GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA--GRKV 365
+ G+E GR + P+GI + L + + +KEL + F R +
Sbjct: 282 LSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIM 341
Query: 366 MLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEI 425
+LGVD +D+ KGI KLLA E+ L ++ +W+GKVVL+QIA P R + + + ++ H
Sbjct: 342 LLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHST 401
Query: 426 VGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD- 484
V RIN FG PI +D L F A Y V + LVT++RDGMNL+ YE++ +
Sbjct: 402 VKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQG 461
Query: 485 --------------LKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPE 530
KK +L++SEF G + SL +GAI VNPWNI VA+A+ AL M+
Sbjct: 462 NEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVADAMDSALEMAEP 520
Query: 531 EREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE------------AQLRIKQVPPSLR 578
E++ RH ++ +V+TH WA +F+ +L T + R+ + P+ R
Sbjct: 521 EKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFR 580
Query: 579 EADSIER----YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634
+ S+E Y R+ R ++L ++ TL + ++ LN L
Sbjct: 581 KL-SMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDI-----------LNTL 628
Query: 635 CHDPKTTIVVLSGSDRNVLDKNFQE-YNLWLAAENGMFLRCT-TGKWMTTMPEHLNMEWV 692
C D + ++S R L F L +AAE+G FLR +W T +P + W
Sbjct: 629 CRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPV-ADCSWK 687
Query: 693 DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVE 752
+ V + +TE T S E +ET+LVW Y+ AD +FG QA+++L HL ++N V
Sbjct: 688 QIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHL-ESVLANEPVT 746
Query: 753 VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797
V G VEV+ GV+KG R+L+ + ++ D+VLCIG
Sbjct: 747 VKSGQNIVEVKPQGVSKGLVAKRLLSIM---QERGMLPDFVLCIG 788
|
Length = 854 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 282 bits (722), Expect = 5e-86
Identities = 175/496 (35%), Positives = 253/496 (51%), Gaps = 45/496 (9%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLG-VKEFEARWIGWAGVNVPDEIG-- 151
RL+VV+NR+ A + SAGGL +LG +K W GW+G E G
Sbjct: 3 RLVVVSNRI---APPDEHKA-----SAGGLAVGILGALKAAGGLWFGWSG-----ETGNE 49
Query: 152 QKALTKALAEKRCIPVF-LDEDIVHQYYNGYCNNILWPLFHY-LGLPQEDRLATTRSFQS 209
+ L K F L E +YYN + N +LWP FHY L L Q R A
Sbjct: 50 DQPLKKVKKGNITWASFNLSEQDYDEYYNQFSNAVLWPAFHYRLDLVQFQRPA------- 102
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS 269
+ Y++ N + AD + KD D++W HDYHL+ L++ + ++G+FLH PFP+
Sbjct: 103 -WEGYLRVNALLADKLLPLLKDDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTP 161
Query: 270 EIHRTLPSRSDLLRAVLAADLVGFHTYDYARHF---VSACTRILGFEGTPEGVEDQGRLT 326
EI LP +LL + DL+GF T + F +S TR+ G + T
Sbjct: 162 EIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRT 221
Query: 327 RVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFE 386
V +PIGI+ + I P+ + +L+ + + V+RLD KG+P++ LA+E
Sbjct: 222 EV--YPIGIEPDE-IAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYE 278
Query: 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 446
LE+ GK+ QIA +R DV YQ + Q+ GRING++G L P+++L++
Sbjct: 279 ALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQ 338
Query: 447 SLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKK-GVLILSEFAGAAQSLGAG 505
D L ++ +DV LVT LRDGMNLV+ E+VA QD GVL+LS+FAGAA L +
Sbjct: 339 HFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTS- 397
Query: 506 AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565
A++VNP++ EVA A+ RAL M ER RH + + W E F+S+L
Sbjct: 398 ALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDL------ 451
Query: 566 AQLRIKQVPPSLREAD 581
KQ+ P E+
Sbjct: 452 -----KQIVPRSAESQ 462
|
Length = 474 |
| >gnl|CDD|131451 TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Score = 272 bits (696), Expect = 4e-82
Identities = 148/502 (29%), Positives = 236/502 (47%), Gaps = 53/502 (10%)
Query: 99 VANRLPVSAIR--RGEDSWSLEISAGGLVSALLGVKEFEAR----WIGWAGVNVPDEIGQ 152
+ +RLP R G+ S G++ LL F W+ WA +
Sbjct: 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSF--FGDGRAGTWVAWAEHDENSGETF 58
Query: 153 KALTKALAEKRCIP--VFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQ 210
+ AE + + L ++ V +Y+ WP+ H +F +
Sbjct: 59 DSHMTVPAEYKLTAARIPLSKEQVDIFYHITSKEAFWPILH--------------TFPER 104
Query: 211 F-------AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLH 263
F ++K N+ FA+ +G VW HDY+L +P +++ D+K+ +F H
Sbjct: 105 FQFREDDWQVFLKVNRAFAEAACLEAAEGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHH 164
Query: 264 TPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQ- 322
TPFPS+++ LP R ++ ++L D +GFH Y +FV A ++ + D
Sbjct: 165 TPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPR 224
Query: 323 --------------------GRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG 362
R+ ++ A P+G D ER AL ++ ++ ++ AG
Sbjct: 225 FITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAG 284
Query: 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQV 422
K++L +R+D KGI +KL A+E+ LE + GKV L+ VP + + Y L Q+
Sbjct: 285 VKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQI 344
Query: 423 HEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482
+ VGRINGRF + P+ RSL + + A +A+ DV +T LRDG+NLV+ E+VA
Sbjct: 345 EQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAA 404
Query: 483 QDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542
Q L GVL+LSEFAGAA L GA+L NP++ + I AL M E++ R F
Sbjct: 405 QGLLDGVLVLSEFAGAAVEL-KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDA 463
Query: 543 VTTHTAQEWAETFVSELNDTVV 564
V + Q WA+ F++ ++
Sbjct: 464 VNYYDVQRWADEFLAAVSPQAQ 485
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. Length = 487 |
| >gnl|CDD|216992 pfam02358, Trehalose_PPase, Trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 226 bits (578), Expect = 2e-68
Identities = 72/206 (34%), Positives = 108/206 (52%), Gaps = 12/206 (5%)
Query: 595 ILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD 654
L ++ TL+ V+ P L LN L DP T+ ++SG R D
Sbjct: 1 FLDYDGTLSPIVEDP---------DAAVPSDRLLSLLNRLASDPPNTVAIISGRSRAFED 51
Query: 655 KNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQR 714
F NL LAAE+G F+R G+ T + E +++W + + E +TERTP S+ E +
Sbjct: 52 LFFGVPNLGLAAEHGAFIRDPGGEDWTNLAEVEDLDWKKEVAAILEEYTERTPGSYIEDK 111
Query: 715 ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAID 774
+++L W+Y+ AD +FG QA+++ +HL + V V QG K VEVR VGV+KG A +
Sbjct: 112 KSALAWHYRNADDDFGVFQAKELAEHLESVLKDYPDVRVTQGKKVVEVRPVGVSKGKAAE 171
Query: 775 RILAEIVHSKKMKTAIDYVLCIGHFL 800
R+L E+ + D+ LCIG
Sbjct: 172 RLLEELGSAGSP---PDFPLCIGDDR 194
|
This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. Length = 235 |
| >gnl|CDD|224789 COG1877, OtsB, Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 2e-25
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 19/224 (8%)
Query: 574 PPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNA 633
P+L+ +E YL + RLL L ++ TLTE V P E + L L
Sbjct: 1 TPALQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHP--------EAAV-PDDRLLSLLQD 51
Query: 634 LCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVD 693
L DP+ + ++SG L++ F + L AE+G +R GKW + E ++ W+
Sbjct: 52 LASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLK 111
Query: 694 SLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEV 753
+ + EY+ ERTP S+ E++ ++ +Y+ A+ + G A L I+ + V
Sbjct: 112 EVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATL----INELKLRV 167
Query: 754 VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797
G VE+R GV+KGAAI I+ E+ + + G
Sbjct: 168 TPGKMVVELRPPGVSKGAAIKYIMDELPFDG------RFPIFAG 205
|
Length = 266 |
| >gnl|CDD|233092 TIGR00685, T6PP, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 66.0 bits (161), Expect = 6e-12
Identities = 43/196 (21%), Positives = 73/196 (37%), Gaps = 15/196 (7%)
Query: 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648
+ R ++ TL+E V P + L L L P I ++SG
Sbjct: 1 ARKRAFFFDYDGTLSEIVPDPD---------AAVVSDRLLTILQKLAARPHNAIWIISGR 51
Query: 649 DRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPR 708
+ L LA E+G ++ W + E T R P
Sbjct: 52 KFLEKWLGVKLPGLGLAGEHGCEMKDNGSCQDWVNLTEKIPSWKVRANELREEITTR-PG 110
Query: 709 SHFEQRETSLVWNYKYADV-EFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGV 767
E++ +L W+Y+ A V E R +A+++ + + + +EV+ G VE++ V
Sbjct: 111 VFIERKGVALAWHYRQAPVPELARFRAKELKEKILS----FTDLEVMDGKAVVELKPRFV 166
Query: 768 TKGAAIDRILAEIVHS 783
KG + R+L S
Sbjct: 167 NKGEIVKRLLWHQPGS 182
|
Trehalose, a neutral disaccharide of two glucose residues, is an important osmolyte for dessication and/or salt tolerance in a number of prokaryotic and eukaryotic species, including E. coli, Saccharomyces cerevisiae, and Arabidopsis thaliana. Many bacteria also utilize trehalose in the synthesis of trehalolipids, specialized cell wall constituents believed to be involved in the uptake of hydrophobic substances. Trehalose dimycolate (TDM, cord factor) and related substances are important constituents of the mycobacterial waxy coat and responsible for various clinically important immunological interactions with host organism. This enzyme, trehalose-phosphatase, removes a phosphate group in the final step of trehalose biosynthesis. The trehalose-phosphatase from Saccharomyces cerevisiae is fused to the synthase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes [Cellular processes, Adaptations to atypical conditions]. Length = 244 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 2e-06
Identities = 72/312 (23%), Positives = 111/312 (35%), Gaps = 61/312 (19%)
Query: 233 DVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVG 292
DVV HD+ + + + +H E R LL+ A +
Sbjct: 87 DVVHAHDWLALLAAALAA-RLLGIPLVLTVH----GLEFGRPGNELGLLLKLARALERRA 141
Query: 293 FHTYD-------YARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALE 345
D R + G ++T + P G+D+ERF A
Sbjct: 142 LRRADRIIAVSEATREELRE-----------LGGVPPEKITVI---PNGVDTERFRPAPR 187
Query: 346 INPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 405
++ I E V+L V RL KG+ L A K +E D R +V
Sbjct: 188 AARRRLGIPE------DEPVILFVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIV----- 236
Query: 406 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 465
D P + L + E+ + R + L ALYA DV ++
Sbjct: 237 ----GDGPLREELEALAAEL--GLGDRV---------TFLGFVPDEDLPALYAAADVFVL 281
Query: 466 TSLRDGMNLVSYEFVACQDLKKGV-LILSEFAGAAQSL--GAGAILVNPWNITEVANAIA 522
SL +G LV E +A G+ ++ S+ G + + G +LV P + +A AI
Sbjct: 282 PSLYEGFGLVLLEAMAA-----GLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAIL 336
Query: 523 RALNMSPEEREK 534
R L+ PE R +
Sbjct: 337 RLLD-DPELRRR 347
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 48.8 bits (115), Expect = 7e-06
Identities = 67/313 (21%), Positives = 110/313 (35%), Gaps = 48/313 (15%)
Query: 227 KHYKDGDVVWCHDYHLMFLPK--CLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 284
K D++ H L L + + LH P + L LLR
Sbjct: 79 KRLLPYDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRL 138
Query: 285 VLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRAL 344
+L VS + L +E G ++ P GID+E+F
Sbjct: 139 LLKRLKKALRLLADRVIAVSPALKEL--------LEALGVPNKIVVIPNGIDTEKFA--- 187
Query: 345 EINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQI 404
P ++ + G+ V+L V RLD KG+ + A K + D + L I
Sbjct: 188 ---PARIGLLP----EGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIK-----LVI 235
Query: 405 AVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464
E ++L + + + + L L A DV +
Sbjct: 236 VGDGPERREELEKLAKK-LGLEDNV-------------KFLGYVPDEELAELLASADVFV 281
Query: 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAI 521
+ SL +G LV E +A G +++ G + G +LV P ++ E+A+A+
Sbjct: 282 LPSLSEGFGLVLLEAMAA-----GTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADAL 336
Query: 522 ARALNMSPEEREK 534
+ L PE RE+
Sbjct: 337 EQLLED-PELREE 348
|
Length = 381 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 7e-04
Identities = 48/207 (23%), Positives = 81/207 (39%), Gaps = 37/207 (17%)
Query: 332 PIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEKF 388
GID++RF + +P + +++ V+L V RL K P L AF K
Sbjct: 160 YNGIDTDRFRK----DPAR--RLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKL 213
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF-GTLTAVPIHHLDRS 447
L + D + L IA D P L + + + G +
Sbjct: 214 LSDYLDIK-----LLIA----GDGPLRATLERLIKALGLSNRVKLLGLRDDIA------- 257
Query: 448 LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAI 507
A Y D+ +++S +G LV E +AC+ ++ ++ G + +G +
Sbjct: 258 -------AYYNAADLFVLSSAWEGFGLVVAEAMACELP----VVATDAGGVREVVGDSGL 306
Query: 508 LVNPWNITEVANAIARALNMSPEEREK 534
+V + +AN I L MS EER+
Sbjct: 307 IVPISDPEALANKIDEILKMSGEERDI 333
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
| >gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 0.001
Identities = 78/365 (21%), Positives = 110/365 (30%), Gaps = 79/365 (21%)
Query: 212 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI 271
Y++ N+ A+ D DVV HD + LP K W H ++
Sbjct: 67 EIYLEWNEENAERPLLDL-DADVVVIHDPQPLALPLFKK--KRGRPWIWRCHI-----DL 118
Query: 272 HRTLPSRSDLLR-AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAA 330
D L+ + D FH +Y V R
Sbjct: 119 SSPNRRVWDFLQPYIEDYDAAVFHLPEYVPPQVP---------------------PRKVI 157
Query: 331 FPIGID---------SERFIRA-LEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQ 380
P ID S I LE K + R + V R D K
Sbjct: 158 IPPSIDPLSGKNRELSPADIEYILE--------KYGIDPE--RPYITQVSRFDPWKDPFG 207
Query: 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440
+ A+ K E D L + TD PE + +V E + LT P
Sbjct: 208 VIDAYRKVKERVPD-----PQLVLVGSGATDDPEGWIVYEEVLEYAE-GDPDIHVLTLPP 261
Query: 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV-LILSEFAGAA 499
+ L+ + AL + V L S+R+G L E L KG +I G
Sbjct: 262 VSDLE-------VNALQRASTVVLQKSIREGFGLTVTE-----ALWKGKPVIAGPVGGIP 309
Query: 500 QSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-----TTHTAQEWA 552
+ G LV+ + E A I L PE R K + HV T +++
Sbjct: 310 LQIEDGETGFLVDT--VEEAAVRILYLLR-DPELRRKMGANAREHVRENFLITRHLKDYL 366
Query: 553 ETFVS 557
Sbjct: 367 YLISK 371
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 856 | |||
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 100.0 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 100.0 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 100.0 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 100.0 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 100.0 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 100.0 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 100.0 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 100.0 | |
| PLN02580 | 384 | trehalose-phosphatase | 100.0 | |
| PLN02151 | 354 | trehalose-phosphatase | 100.0 | |
| PLN03017 | 366 | trehalose-phosphatase | 100.0 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 100.0 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.94 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.94 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.94 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.94 | |
| PLN02316 | 1036 | synthase/transferase | 99.94 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.94 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.94 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.93 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.93 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.93 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.93 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.93 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.92 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.92 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.91 | |
| PLN00142 | 815 | sucrose synthase | 99.91 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.91 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.91 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.91 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.91 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.9 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.9 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.9 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.89 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.89 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.89 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.89 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.89 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.89 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.89 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.88 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.88 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.88 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.88 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.87 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.87 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.87 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.87 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.87 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.87 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.87 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.86 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.86 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.86 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.86 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.86 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.86 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.86 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.86 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.85 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.85 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.85 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.85 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.85 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.84 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.84 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.84 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.84 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.84 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.83 | |
| PLN02887 | 580 | hydrolase family protein | 99.83 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.83 | |
| PLN02423 | 245 | phosphomannomutase | 99.83 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.83 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.83 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.83 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.83 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.82 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.82 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.82 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.81 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.81 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.81 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.8 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.8 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.8 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.79 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.79 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.79 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.78 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.78 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.78 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.77 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.75 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 99.74 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.74 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.73 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.73 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.72 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 99.71 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.7 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 99.64 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.6 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.59 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.54 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.44 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.4 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.39 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.33 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.33 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.32 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 99.3 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.3 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.26 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.23 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.22 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.22 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.2 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.09 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.09 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.07 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.05 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 99.02 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 98.92 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 98.91 | |
| PF03332 | 220 | PMM: Eukaryotic phosphomannomutase; InterPro: IPR0 | 98.81 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.59 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 98.55 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 98.53 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 98.38 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.34 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.3 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.25 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.23 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 98.0 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.87 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 97.7 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 97.69 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 97.68 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.51 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 97.39 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 97.31 | |
| PLN02954 | 224 | phosphoserine phosphatase | 97.14 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 97.11 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 97.06 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 96.83 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 96.83 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 96.76 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.75 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 96.66 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 96.54 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.52 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.24 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 96.04 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 96.02 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 96.01 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 96.0 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 95.89 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 95.79 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 95.6 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 95.58 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 95.41 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 95.37 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 95.3 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 95.22 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 95.11 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 95.01 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 94.82 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 94.69 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 94.66 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 94.64 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 94.5 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 94.35 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 94.32 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 94.27 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 94.26 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 94.16 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 94.15 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 94.15 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 94.09 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 93.83 | |
| PRK06769 | 173 | hypothetical protein; Validated | 93.72 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 93.67 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 93.33 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 93.32 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 93.01 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 92.97 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 92.94 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 92.73 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 92.62 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 92.41 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 92.38 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 92.25 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 92.06 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 91.91 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 91.89 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 91.7 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 91.69 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 91.4 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 91.26 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 91.19 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 91.09 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 91.04 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 90.72 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 90.66 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 90.16 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 90.14 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 90.11 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 89.84 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 89.74 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 89.67 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 89.3 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 89.19 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 88.8 | |
| PRK08238 | 479 | hypothetical protein; Validated | 88.46 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 88.21 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 88.05 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 87.61 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 87.53 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 87.45 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 86.9 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 86.58 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 86.53 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 86.1 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 86.09 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 86.06 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 85.91 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 85.71 | |
| PLN02940 | 382 | riboflavin kinase | 85.31 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 85.15 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 84.45 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 84.07 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 83.92 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 83.78 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 83.17 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 83.16 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 82.02 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 81.32 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 80.57 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 80.43 |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-169 Score=1508.62 Aligned_cols=807 Identities=85% Similarity=1.326 Sum_probs=745.5
Q ss_pred CCCCCCCCCCCCCChhhHHHHhhhhhHHHhhhhhccCCCCCCCC-CCCCcccccchhccccCCCCCCcccccCCCCCC--
Q 003029 1 MPGNSYNSNSSNIPPDRVTRLVREKIERDLRKSSRASHPNDVTD-NGGREVFEDEQRLRDGDNLGPSIVDEDLEGPAS-- 77 (856)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 77 (856)
||||+|+|+++..+.+|++||+|+ ||||+.+++++..++.+ +.+.++.++++..+|..+.++..+++..+|.+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (934)
T PLN03064 1 MPGNKYNGQSSVNPTSRVERLLRE---RELRKSERSSNANDDLDTNAGSEAFENDLRLSEGDNDSSSHVEQLLEGAAAES 77 (934)
T ss_pred CCCcccCCCCCCCCCchHHHHHHH---HHHHhhhcccccccccccchhhhhhhhhccccccccccccchHHHhhhhhhhc
Confidence 899999999977888899999999 99999999998555555 777899999999999999999999999998733
Q ss_pred CCCCCcccCCCCCCCCCcEEEEEcCCccceeecCCCcEEEEecCCcHHHhhcccccCCcEEEEeCCCCCCCchhhHHHHH
Q 003029 78 TPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTK 157 (856)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~Wvg~~g~~~~~~~~~~~~~~ 157 (856)
...++|.+++++.+-++||||||||||+.++++++|.|++++++|||++||.+++..+++||||+|..+++++++..++.
T Consensus 78 ~~~~~~~~~~~~~~~~~rlIiVSNRlPv~~~~~~~g~~~~~~s~GGLvsaL~~~~~~~~~WVGw~g~~~~~~~~~~~~~~ 157 (934)
T PLN03064 78 ALPDGCERQEGRRPLRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTK 157 (934)
T ss_pred cCCcccccccCCCCCCCCEEEEECCCCcceeecCCCceEEeECCCCcHHHhcccccCCeEEEeeCCCCCCCcchhHHHHH
Confidence 36688888888776689999999999999988778999999999999999999977899999999988776555666777
Q ss_pred hhcCceEEEEecChHhHHHHHhhhhhhhccccccCCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Q 003029 158 ALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWC 237 (856)
Q Consensus 158 ~~~~~~~~pV~l~~~~~~~~y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~DvIwv 237 (856)
.+.+++|+||||+++++++||+||||++|||+|||++..+.++....+.++..|++|++||++||++|.+++++||+|||
T Consensus 158 ~l~~~~~~pV~l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~gD~VWV 237 (934)
T PLN03064 158 ALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWC 237 (934)
T ss_pred HhccCceEEEeCCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 88999999999999999999999999999999999864443333222334466999999999999999999999999999
Q ss_pred eCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCC
Q 003029 238 HDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE 317 (856)
Q Consensus 238 HDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~ 317 (856)
||||||++|.+||+++|+++||||+|||||++|+||+||+|++||+|||+||+|||||++|++||+++|.+++|++....
T Consensus 238 HDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~ 317 (934)
T PLN03064 238 HDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE 317 (934)
T ss_pred ecchhhHHHHHHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred ceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccC
Q 003029 318 GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRG 397 (856)
Q Consensus 318 ~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~ 397 (856)
+++++||.++|.++|+|||++.|...+..++++++++.++++++++++|++|||||+.|||.++|+||++||++||+|++
T Consensus 318 ~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~ 397 (934)
T PLN03064 318 GVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRD 397 (934)
T ss_pred eEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccC
Confidence 89999999999999999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHH
Q 003029 398 KVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSY 477 (856)
Q Consensus 398 ~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~l 477 (856)
+|+|+||+.|+|+++++|++|+.++.++|++||++||+.+|.||+|+.+.+++++|.+||++|||||+||++||||||++
T Consensus 398 kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~ 477 (934)
T PLN03064 398 KVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSY 477 (934)
T ss_pred CEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 003029 478 EFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVS 557 (856)
Q Consensus 478 Eama~~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 557 (856)
||||||.+++|+||+|||+|++++|+.+|++|||||++++|+||.+||+|+++||++|+++++++|.+||+.+|+++|+.
T Consensus 478 Eyva~~~~~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~ 557 (934)
T PLN03064 478 EFVACQDSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVS 557 (934)
T ss_pred HHHHhhcCCCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHH
Confidence 99999998999999999999999997789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHhhhhccccCCCCcchHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcC
Q 003029 558 ELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHD 637 (856)
Q Consensus 558 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d 637 (856)
+|+.+..++..+..+..+.|+.+.+.++|+++++|||||||||||++..+.|..+.+++.+....|+++++++|++|++|
T Consensus 558 ~L~~~~~~~~~~~~~~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~d 637 (934)
T PLN03064 558 ELNDTVVEAQLRTRQVPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSD 637 (934)
T ss_pred HHHHHHhhhhccccccCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhC
Confidence 99998876666666677899999999999999999999999999999988886555666556778999999999999999
Q ss_pred CCCeEEEEcCCCHhhHHHHhcccCceEEeeCceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecce
Q 003029 638 PKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS 717 (856)
Q Consensus 638 ~g~~V~I~SGR~~~~l~~~~~~l~lgliaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~s 717 (856)
++|+|+|+|||+++.|++||+.++++++||||++++..++.|...+++..+.+|++.+..+|++|++++||+++|.|+++
T Consensus 638 p~n~VaIVSGR~~~~Le~~fg~~~L~LaAEHG~~~R~~~~~w~~~~~~~~~~~W~~~v~~ile~~~eRtPGS~IE~K~~S 717 (934)
T PLN03064 638 PKTTIVVLSGSDRSVLDENFGEFDMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFETRETS 717 (934)
T ss_pred CCCeEEEEeCCCHHHHHHHhCCCCceEEeeCCeEEecCCCcceeccccccchHHHHHHHHHHHHHHhcCCCcEEEEcCcE
Confidence 99999999999999999999999999999999999977788985554566789999999999999999999999999999
Q ss_pred EEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEe
Q 003029 718 LVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (856)
Q Consensus 718 i~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~G 797 (856)
++|||+++||+++..|++++.++|+...+.+.+++|+.|+++|||+|.|+|||.|+++|++++..+.....++|||+|+|
T Consensus 718 LawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~G 797 (934)
T PLN03064 718 LVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIG 797 (934)
T ss_pred EEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHHHHHHHHHhhhhccccCCCCCEEEEeC
Confidence 99999999999999999999999966566667899999999999999999999999999998753322224689999999
Q ss_pred cCCcc-cccccccccc
Q 003029 798 HFLGK-NCNLPLQFLM 812 (856)
Q Consensus 798 D~~~n-De~M~f~~~~ 812 (856)
| |.+ ||+| |+++.
T Consensus 798 D-d~~~DEdm-F~~l~ 811 (934)
T PLN03064 798 H-FLGKDEDI-YTFFE 811 (934)
T ss_pred C-CCCCcHHH-HHHHh
Confidence 9 875 9999 99984
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-154 Score=1388.74 Aligned_cols=730 Identities=36% Similarity=0.644 Sum_probs=660.2
Q ss_pred CCcEEEEEcCCccceeecCC--CcEEEEecCCcHHHhhccc-c--cCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEE
Q 003029 93 RQRLLVVANRLPVSAIRRGE--DSWSLEISAGGLVSALLGV-K--EFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPV 167 (856)
Q Consensus 93 ~~~livvsnrlP~~~~~~~~--~~~~~~~~~ggl~~~l~~~-~--~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~pV 167 (856)
+.||||||||||+.++++++ +.|++++++|||+++|.++ + ..+++||||+|..++.+++++.....+.+|+|+||
T Consensus 59 ~~rliiVsnrlPv~~~~~~~g~~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv 138 (854)
T PLN02205 59 KDRIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPT 138 (854)
T ss_pred CCcEEEEEccCceEEEEcCCCCcceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEe
Confidence 57999999999999998643 6899999999999999977 3 47899999999877765554444666788999999
Q ss_pred ecChHhHHHHHhhhhhhhccccccCCC-CCcccccccchhhHH-HHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCccchh
Q 003029 168 FLDEDIVHQYYNGYCNNILWPLFHYLG-LPQEDRLATTRSFQS-QFAAYIKANQMFADVVNKHYKD-GDVVWCHDYHLMF 244 (856)
Q Consensus 168 ~l~~~~~~~~y~~f~n~~LWp~fH~~~-~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~-~DvIwvHDyhl~l 244 (856)
||+++++++||+||||++|||+|||+. ..+ .....|+. .|++|++||++||++|.+++++ +|+|||||||||+
T Consensus 139 ~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~----~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~l 214 (854)
T PLN02205 139 FLPPDLFTRYYHGFCKQQLWPLFHYMLPLSP----DLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMV 214 (854)
T ss_pred eCCHHHHHHHHHhhhhccccchhccCCCCCc----cccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhH
Confidence 999999999999999999999999984 322 11235774 5999999999999999999998 6999999999999
Q ss_pred HHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCC----Ccee
Q 003029 245 LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP----EGVE 320 (856)
Q Consensus 245 lp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~----~~v~ 320 (856)
+|.+||+++|+++||||+|||||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|+++.. .+++
T Consensus 215 lP~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~ 294 (854)
T PLN02205 215 LPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLE 294 (854)
T ss_pred HHHHHHhhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999998754 3578
Q ss_pred eCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhc--CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCc
Q 003029 321 DQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA--GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGK 398 (856)
Q Consensus 321 ~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~--~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~ 398 (856)
|+||.++|.++|+|||++.|......+++.+++++++++++ ++++|++|||||+.|||.++|+||++||++||+|+++
T Consensus 295 ~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gk 374 (854)
T PLN02205 295 YYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGK 374 (854)
T ss_pred ECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999989999999999999995 6999999999999999999999999999999999999
Q ss_pred eEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHH
Q 003029 399 VVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 478 (856)
Q Consensus 399 v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lE 478 (856)
|+||||+.|+|+++++|++++.+++++|++||++||+.+|.||+|+.+.++++++.|||++|||+++||+|||||||++|
T Consensus 375 vvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~E 454 (854)
T PLN02205 375 VVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYE 454 (854)
T ss_pred EEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCC---------------CCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 003029 479 FVACQDL---------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 543 (856)
Q Consensus 479 ama~~~~---------------~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v 543 (856)
|+|||.+ ++|+||+|||+||+.+| .+|++|||||++++|+||.+||+||.+||+.|+++++++|
T Consensus 455 yia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L-~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v 533 (854)
T PLN02205 455 YIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYV 533 (854)
T ss_pred eeEEccCccccccccccccccCCCCceEeeeccchhHHh-CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 9999863 57999999999999999 7899999999999999999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHHHhHHhhh-hccc--------------cCCCCcchHHHHHHHHhcCCeEEEEecCCccCCCCCC
Q 003029 544 TTHTAQEWAETFVSELNDTVVEAQ-LRIK--------------QVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDT 608 (856)
Q Consensus 544 ~~~~~~~W~~~fl~~l~~~~~~~~-~~~~--------------~~~~~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~ 608 (856)
.+||+.+|+++||.+|+.+++.+. .+.. ..+++|+.+.+.++|+++++|+|++||||||++...
T Consensus 534 ~~~d~~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~- 612 (854)
T PLN02205 534 STHDVGYWARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQAS- 612 (854)
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCcc-
Confidence 999999999999999999865431 1111 126889999999999999999999999999998742
Q ss_pred CCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc-CceEEeeCceEEEecCC-eeeeccccc
Q 003029 609 PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY-NLWLAAENGMFLRCTTG-KWMTTMPEH 686 (856)
Q Consensus 609 p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l-~lgliaenG~~i~~~~~-~w~~~~~~~ 686 (856)
....|+++++++|++|++++|+.|+|+|||++..|++||+.+ +++++||||++++..++ .|.... ..
T Consensus 613 ----------~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~-~~ 681 (854)
T PLN02205 613 ----------IDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCV-PV 681 (854)
T ss_pred ----------ccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecc-hh
Confidence 135688999999999999999999999999999999999997 69999999999996444 787543 33
Q ss_pred CChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCC
Q 003029 687 LNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVG 766 (856)
Q Consensus 687 ~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~g 766 (856)
.+..|++.+..+++.|++++||+++|.|+++++|||+++|++++..|++++..++ ...+.+..+.+..|+++|||+|++
T Consensus 682 ~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l-~~~l~~~~~~v~~G~~vvEV~p~g 760 (854)
T PLN02205 682 ADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHL-ESVLANEPVTVKSGQNIVEVKPQG 760 (854)
T ss_pred hhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHH-HHHHhcCceEEEECCcEEEEEeCC
Confidence 4678999999999999999999999999999999999999999999999999988 666666678889999999999999
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccC-----------cceEEeCCC--Cc-cccCCHH
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQT-----------ISTVRLDSS--FL-HYLRMKM 832 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~-----------~~~v~V~~~--~~-~~l~~~~ 832 (856)
+|||.|+++|++++.. ..+++|+++|||| |.|||+| |++++.. +++|+||.. .| |||.++.
T Consensus 761 vnKG~Al~~Ll~~~~~---~g~~~d~vl~~GD-D~nDedM-F~~~~~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~ 835 (854)
T PLN02205 761 VSKGLVAKRLLSIMQE---RGMLPDFVLCIGD-DRSDEDM-FEVITSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTA 835 (854)
T ss_pred CCHHHHHHHHHHHHHh---cCCCcccEEEEcC-CccHHHH-HHHhhhhccCCcccccccceeEEECCCCccCeEecCCHH
Confidence 9999999999865321 0156899999999 9999999 9999742 478888753 34 9999999
Q ss_pred HHHHHHHHHHHHH
Q 003029 833 CMRFLSQNYLMMA 845 (856)
Q Consensus 833 ~~~~~l~~~~~~~ 845 (856)
+|+.||+.|+...
T Consensus 836 eV~~lL~~L~~~~ 848 (854)
T PLN02205 836 EIVRLMQGLASVS 848 (854)
T ss_pred HHHHHHHHHHhcc
Confidence 9999999998643
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-151 Score=1367.16 Aligned_cols=743 Identities=70% Similarity=1.161 Sum_probs=672.9
Q ss_pred CCcEEEEEcCCccceeecCCCcEEEEecCCcHHHhhcccccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEEecChH
Q 003029 93 RQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDED 172 (856)
Q Consensus 93 ~~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~ 172 (856)
++||||||||||+.+.++++|.|++++++|||++||.+++..+++||||+|..+++++++..+...+.+++|+|||| ++
T Consensus 10 ~~rliiVsnrlp~~~~~~~~~~~~~~~~~ggl~~al~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pv~l-~~ 88 (797)
T PLN03063 10 RPRLLVVANRLPVSAKRTGEDSWSLEMSPGGLVSALLGVKEFETKWIGWPGVDVHDEIGKAALTESLAEKGCIPVFL-NE 88 (797)
T ss_pred CCCEEEEECCCCccceecCCCceEEeeCCCCHHHHHHHHHhcCceEEEeCCCcCCcccchhHHHHHhhcCCeEEeeh-HH
Confidence 78999999999999888767999999999999999999966699999999987665545556677788999999999 99
Q ss_pred hHHHHHhhhhhhhccccccCCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhc
Q 003029 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY 252 (856)
Q Consensus 173 ~~~~~y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~~ 252 (856)
++++||+||||++|||+|||++..+.+.......++..|++|++||++||++|.+++++||+||||||||+++|++||++
T Consensus 89 ~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWvhDYhL~llp~~lR~~ 168 (797)
T PLN03063 89 VFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEEGDVVWCHDYHLMFLPQYLKEY 168 (797)
T ss_pred HHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhhHHHHHHHh
Confidence 99999999999999999999843321221222334566999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEee
Q 003029 253 NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP 332 (856)
Q Consensus 253 ~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP 332 (856)
.|+++||||+|||||++|+||+||+|++|++|||+||+|||||++|++||+++|++++|++....++.++|+.++|.++|
T Consensus 169 ~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP 248 (797)
T PLN03063 169 NNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFP 248 (797)
T ss_pred CCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999988778899999999999999
Q ss_pred cccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCCh
Q 003029 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV 412 (856)
Q Consensus 333 ~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~ 412 (856)
+|||++.|.+....+++++....++++++++++|++||||++.||+.++|+||++|++++|+++++++|+||++|+++++
T Consensus 249 ~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~ 328 (797)
T PLN03063 249 IGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDV 328 (797)
T ss_pred cccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCch
Confidence 99999999987777777777778888888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEE
Q 003029 413 PEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLIL 492 (856)
Q Consensus 413 ~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVl 492 (856)
++|+++++++++++++||++||+.+|.||+|+.+.++.+++.++|++|||||+||++||||||++||||||..++|++|+
T Consensus 329 ~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVl 408 (797)
T PLN03063 329 PEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVL 408 (797)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999878899999
Q ss_pred eCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHhhhhcccc
Q 003029 493 SEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQ 572 (856)
Q Consensus 493 Se~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~~~~~~~ 572 (856)
||++|+++.+|.+|++|||||++++|+||.++|+|+++||++|+++++++|.+||+.+|++.||++|..+...+......
T Consensus 409 Se~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~~~~~~~ 488 (797)
T PLN03063 409 SEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTRN 488 (797)
T ss_pred eCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhhhhcccC
Confidence 99999999997799999999999999999999999999999999999999999999999999999999998765555556
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhh
Q 003029 573 VPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (856)
Q Consensus 573 ~~~~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~ 652 (856)
.+++|+.+.+.++|++|++|+|||||||||++..++|. .+....|+++++++|++|+++++|.|+|+|||+.+.
T Consensus 489 ~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~------~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~ 562 (797)
T PLN03063 489 IPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQI------KEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDI 562 (797)
T ss_pred CCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCcc------ccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHH
Confidence 67889999999999999999999999999998754331 113567899999999999999999999999999999
Q ss_pred HHHHhcccCceEEeeCceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHH
Q 003029 653 LDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRI 732 (856)
Q Consensus 653 l~~~~~~l~lgliaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~ 732 (856)
|++||+.++++++||||++++..++.|...+++..+.+|++.+..+|++|++++||+++|.|+++++||||++||+++..
T Consensus 563 L~~~~~~~~l~l~aeHG~~~r~~~~~w~~~~~~~~~~~w~~~v~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~ 642 (797)
T PLN03063 563 LDKNFGEYNIWLAAENGMFLRHTSGEWVTTMPEHMNLDWVDGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRA 642 (797)
T ss_pred HHHHhCCCCCcEEEeCCEEEecCCCceeeccccccChhHHHHHHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHH
Confidence 99999998999999999999976778986554556788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-cccccccccc
Q 003029 733 QARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFL 811 (856)
Q Consensus 733 qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~ 811 (856)
|++++.++|.+..+.+.+++|+.|+++|||+|.++|||.|+++|++++........++|||+|+|| +. +||+| |+++
T Consensus 643 ~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gd-d~~~DEdm-F~~l 720 (797)
T PLN03063 643 QARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGY-FLEKDEDV-YTFF 720 (797)
T ss_pred HHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHHHHHHhhhccccCCCCCEEEEeCC-CCCCcHHH-HHhc
Confidence 999999998444555668999999999999999999999999999987211011135799999999 74 69999 9999
Q ss_pred ccCc------------------------------ceEEeCCC--Cc-cccCCHHHHHHHHHHHHHH
Q 003029 812 MQTI------------------------------STVRLDSS--FL-HYLRMKMCMRFLSQNYLMM 844 (856)
Q Consensus 812 ~~~~------------------------------~~v~V~~~--~~-~~l~~~~~~~~~l~~~~~~ 844 (856)
+..+ ++|+||.. .| |||.++.+|+.||+.|..+
T Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~~~s~A~y~l~~~~eV~~lL~~l~~~ 786 (797)
T PLN03063 721 EPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQARTKARYVLDSSNDVVSLLHKLAVA 786 (797)
T ss_pred cccccccccccccccccccccccccccccccCceEEEEECCCCccCeecCCCHHHHHHHHHHHhcc
Confidence 8644 56888764 34 9999999999999998853
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-140 Score=1275.99 Aligned_cols=718 Identities=42% Similarity=0.730 Sum_probs=659.4
Q ss_pred CcEEEEEcCCccceeecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCc--hhhHHHHHhhcCceEEEEecC
Q 003029 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDE--IGQKALTKALAEKRCIPVFLD 170 (856)
Q Consensus 94 ~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~--~~~~~~~~~~~~~~~~pV~l~ 170 (856)
+||||||||+|+.+.+++ |.|++++++|||++||.++ +..+++||||+|...+.. .++..+...+.+|+|+||||+
T Consensus 1 ~~livvsnr~p~~~~~~~-~~~~~~~~~ggl~~~l~~~~~~~~~~wvg~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 79 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED-GGVELTPSVGGLATGLRSFHERGGGLWVGWPGLDLEEESEEQRARIEPRLEELGLVPVFLS 79 (726)
T ss_pred CCEEEEEcCCCcceeecC-CceEEeeCCCchHHHHHHHhhcCCeEEEEeCCCCccccchhhhhhhhhhccCceEEEEeCC
Confidence 479999999999987754 5899999999999999998 778999999999765542 222334566789999999999
Q ss_pred hHhHHHHHhhhhhhhccccccCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHH
Q 003029 171 EDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 249 (856)
Q Consensus 171 ~~~~~~~y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~l 249 (856)
+++++.||+||||++|||+|||++... .|+ ..|++|++||++||++|.+.++++|+||||||||+++|++|
T Consensus 80 ~~~~~~~y~gf~n~~lWp~~H~~~~~~--------~~~~~~w~~Y~~vN~~fA~~~~~~~~~~d~vwvhDYhl~l~p~~l 151 (726)
T PRK14501 80 AEEVDRYYEGFCNSTLWPLFHYFPEYT--------EFEDRFWESYERVNQRFAEAIAAIARPGDVVWVHDYQLMLLPAML 151 (726)
T ss_pred HHHHHHHHHHhhhccccchhcccCccc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCchhhhHHHHH
Confidence 999999999999999999999996433 377 45999999999999999999999999999999999999999
Q ss_pred HhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEE
Q 003029 250 KEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVA 329 (856)
Q Consensus 250 r~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~ 329 (856)
|++.|+++||||+|+|||++++|++||+|++|++|||+||+|||||++|++||+++|.++++++.....++++|+.++|.
T Consensus 152 r~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~ 231 (726)
T PRK14501 152 RERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVD 231 (726)
T ss_pred HhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999887777889999999999
Q ss_pred EeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCC
Q 003029 330 AFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR 409 (856)
Q Consensus 330 viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r 409 (856)
++|+|||++.|.+...++++.+..+.+|+.++++++|++|||+++.||+..+|+||++|++++|+++++++|+||+.|+|
T Consensus 232 v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr 311 (726)
T PRK14501 232 AFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSR 311 (726)
T ss_pred EEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC
Confidence 99999999999998777777777888888888999999999999999999999999999999999999999999999998
Q ss_pred CChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCce
Q 003029 410 TDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV 489 (856)
Q Consensus 410 ~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~ 489 (856)
.+.++|+++++++++++++||++||+.+|.||+|+.+.+++++++++|++|||||+||++||||||++||||||.+++|+
T Consensus 312 ~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~ 391 (726)
T PRK14501 312 TGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGV 391 (726)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCce
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999877899
Q ss_pred EEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHhhhhc
Q 003029 490 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLR 569 (856)
Q Consensus 490 lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~~~~ 569 (856)
+|+|+++|+++++ .+|++|||+|++++|+||.++|+|+.+|++.|++++++++.+||+..|+++|+..|.++...+...
T Consensus 392 ~vls~~~G~~~~l-~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~ 470 (726)
T PRK14501 392 LILSEMAGAAAEL-AEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAF 470 (726)
T ss_pred EEEecccchhHHh-CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhcc
Confidence 9999999999998 679999999999999999999999999999999999999999999999999999999987654433
Q ss_pred cccCCCCcchHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 003029 570 IKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (856)
Q Consensus 570 ~~~~~~~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 649 (856)
....++.|+.+.+.++|++|++|||+|||||||++...+| ....++++++++|++|++|+|+.|+|+|||+
T Consensus 471 ~~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~---------~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~ 541 (726)
T PRK14501 471 ASKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDP---------ELAVPDKELRDLLRRLAADPNTDVAIISGRD 541 (726)
T ss_pred ccccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCc---------ccCCCCHHHHHHHHHHHcCCCCeEEEEeCCC
Confidence 3344678899999999999999999999999999976554 2467899999999999998999999999999
Q ss_pred HhhHHHHhcccCceEEeeCceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhh
Q 003029 650 RNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEF 729 (856)
Q Consensus 650 ~~~l~~~~~~l~lgliaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~ 729 (856)
+..++++|+.+++++|++||++++..++.|.... ..+..|++.+.++++.+.++++|+++|.|+.+++|||+++|+++
T Consensus 542 ~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~--~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~ 619 (726)
T PRK14501 542 RDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLE--PVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPEL 619 (726)
T ss_pred HHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECC--CcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHH
Confidence 9999999999999999999999997777887643 24678999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCccccccccc
Q 003029 730 GRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQ 809 (856)
Q Consensus 730 ~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~ 809 (856)
+..+++++.+++ ...+.+..+.++.|+.++||+|+++|||.|+++|++. +++|+++|||| +.||++| |+
T Consensus 620 ~~~~a~~l~~~l-~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~--------~~~d~vl~~GD-~~nDe~M-f~ 688 (726)
T PRK14501 620 GEARANELILAL-SSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEA--------GPYDFVLAIGD-DTTDEDM-FR 688 (726)
T ss_pred HHHHHHHHHHHH-HHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhc--------CCCCEEEEECC-CCChHHH-HH
Confidence 999999999888 6666667888889999999999999999999999983 45899999999 9999999 99
Q ss_pred ccccCcceEEeCCC--Cc-cccCCHHHHHHHHHHHHH
Q 003029 810 FLMQTISTVRLDSS--FL-HYLRMKMCMRFLSQNYLM 843 (856)
Q Consensus 810 ~~~~~~~~v~V~~~--~~-~~l~~~~~~~~~l~~~~~ 843 (856)
+++..+++|.||+. +| |+|.++.+|..+|+.++.
T Consensus 689 ~~~~~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 689 ALPETAITVKVGPGESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred hcccCceEEEECCCCCcceEeCCCHHHHHHHHHHHhc
Confidence 99877889999864 34 999999999999999864
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-117 Score=1036.64 Aligned_cols=711 Identities=46% Similarity=0.778 Sum_probs=657.2
Q ss_pred CCcEEEEEcCCcccee-ecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEEecC
Q 003029 93 RQRLLVVANRLPVSAI-RRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLD 170 (856)
Q Consensus 93 ~~~livvsnrlP~~~~-~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~pV~l~ 170 (856)
+.|+|+|||+||+.+. +.+++.|.+++++|||++++.+. ++.+..||||.|..++++++.......+...+|+||+++
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~ 81 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFREMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFLD 81 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccccceeeEEeeccccCchhhHhHhhhhhhhhcCceeeecC
Confidence 5789999999999984 44588999999999999999987 777899999999888888777778888899999999999
Q ss_pred hHhHHHHHhhhhhhhccccccCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHH
Q 003029 171 EDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 249 (856)
Q Consensus 171 ~~~~~~~y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~l 249 (856)
++...++|++||+++|||+|||...+.... .. .|+ +.|.+|..+|+.||+++++.+++||+|||||||||++|.++
T Consensus 82 ~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~--~~-~~~~~~w~~y~~~n~~f~d~ive~~~~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 82 DELFDSYYNGYCKSILWPLFHYMLIPSEPA--FK-LFDLELWKAYVKVNQAFADKIVEVYEEGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CchhhhhhhhhhhhcccceeecccCCCchh--hh-hhHHHHHHHHHHHhHHHHHHHHHhccCCCcEEEEcchhhccchhh
Confidence 999999999999999999999993322111 11 344 55999999999999999999999999999999999999999
Q ss_pred HhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccC----CCceeeCCee
Q 003029 250 KEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGT----PEGVEDQGRL 325 (856)
Q Consensus 250 r~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~----~~~v~~~g~~ 325 (856)
|+...+++||||+|.|||++|+|+|+|.|++|+.+|+++|+||||+++|+|||+++|.|+++++.. ..++.++||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 999999999999999999999999999999999999999999999999999999999999999876 4568999999
Q ss_pred EEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEE
Q 003029 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 405 (856)
Q Consensus 326 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~ 405 (856)
+.|.++|+|||+.+|......+.+..+..+++..++|+++|++|||+|+.||+..++.||++|+++||+++++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999988888899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCC
Q 003029 406 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDL 485 (856)
Q Consensus 406 ~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~ 485 (856)
.|+++++++|++++.++...+.+||++||+..+.||+++...++..++.++|.+||+++++|++|||||+++||++|+.+
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHh
Q 003029 486 KKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565 (856)
Q Consensus 486 ~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~ 565 (856)
+.+++|+|+|+|+.+.++++++++||||.+++|.+|..+|+|+.+++..|+...+.++..|+...|+..|++.+.+.++.
T Consensus 399 ~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~ 478 (732)
T KOG1050|consen 399 KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKV 478 (732)
T ss_pred cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhh
Confidence 88999999999999999889999999999999999999999999999999999999999999999999999988888877
Q ss_pred hhhccccCCCCcchHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEE
Q 003029 566 AQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVL 645 (856)
Q Consensus 566 ~~~~~~~~~~~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~ 645 (856)
.. ....+.+.|..+.++..|++|++|+|++|||||+....+ ..++..|+.||.||+|+|+|+
T Consensus 479 ~~-~~~~~~~~l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~-----------------~~~~~~l~~L~~dp~n~v~i~ 540 (732)
T KOG1050|consen 479 GF-LGFRVTPLLTAEHIVSDYKKSKKRLILLDYDLTLIPPRS-----------------IKAISILKDLCSDPKNIVYIV 540 (732)
T ss_pred cc-cccccccccChhHhhhhhhhccceEEEecccccccCCCC-----------------chHHHHHHHHhcCCCCeEEEE
Confidence 65 333445669999999999999999999999998887531 119999999999999999999
Q ss_pred cCCCHhhHHHHhccc-CceEEeeCceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeec
Q 003029 646 SGSDRNVLDKNFQEY-NLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKY 724 (856)
Q Consensus 646 SGR~~~~l~~~~~~l-~lgliaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~ 724 (856)
|||++..++.|+... ++|++||||++++.+++ |.+.+ .+++|++.+.++|++|++|||||++|.|+++++|||++
T Consensus 541 s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~-w~~~~---~~~~w~~~v~~i~~~~~ert~GS~ie~k~~~l~~hy~~ 616 (732)
T KOG1050|consen 541 SGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK-WETCV---LDLDWKDLVKDIFQYYTERTPGSYIERKETALVWHYRN 616 (732)
T ss_pred EccCchhhhhhccccccceeecccCceeccCCc-eeeec---ccccHHHHHHHHHHHHHhcCCCceecccCceEEEeeec
Confidence 999999999998877 89999999999998665 98865 68899999999999999999999999999999999999
Q ss_pred CChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccc
Q 003029 725 ADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNC 804 (856)
Q Consensus 725 ~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe 804 (856)
+|+++|..||+++.++| .. .+.+++|+.|+..|||+|.|+|||.|+.+++..+. .++||++|+|| +.+||
T Consensus 617 ad~~~g~~qA~el~~~l-~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~~------~~~df~~c~g~-d~tDe 686 (732)
T KOG1050|consen 617 ADPEFGELQAKELLEHL-ES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEMV------KEPDFVLCIGD-DRTDE 686 (732)
T ss_pred cCcchhHHHHHHHHHHh-cc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhcC------CCcceEEEecC-CCChH
Confidence 99999999999999999 44 67889999999999999999999999999999887 46899999999 99999
Q ss_pred cccccccccCc--------ceEEeCC--CCc-cccCCHHHHHHHHH
Q 003029 805 NLPLQFLMQTI--------STVRLDS--SFL-HYLRMKMCMRFLSQ 839 (856)
Q Consensus 805 ~M~f~~~~~~~--------~~v~V~~--~~~-~~l~~~~~~~~~l~ 839 (856)
+| |+++.... +.+.||. +-| |.|.++.+|.++|+
T Consensus 687 d~-~~~~~~~~~~~~~~~~F~~~~g~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 687 DM-FEFISKAKDPEKVEEIFACTVGQKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred HH-HHHHhhccCCcccceEEEEEcCCCCcccccccCChHHHHhhcc
Confidence 99 99987653 4555554 334 99999999999986
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-114 Score=973.04 Aligned_cols=451 Identities=35% Similarity=0.635 Sum_probs=417.5
Q ss_pred CcEEEEEcCCccceeecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHh-hcCceEEEEecCh
Q 003029 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKA-LAEKRCIPVFLDE 171 (856)
Q Consensus 94 ~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~~~~~~~~-~~~~~~~pV~l~~ 171 (856)
+||||||||+|+... . +.++|||++||.++ +..+|+||||+|....++ . .+... -.++.|.||+|++
T Consensus 2 ~rLivVSNRlp~~~~-----~---~~~~GGL~~aL~~~l~~~~g~WvGW~g~~~~~~--~-~~~~~~~~~~~~~~v~L~~ 70 (474)
T PRK10117 2 SRLVVVSNRIAPPDE-----H---KASAGGLAVGILGALKAAGGLWFGWSGETGNED--Q-PLKKVKKGNITWASFNLSE 70 (474)
T ss_pred CCEEEEECCCcCCCC-----C---CcCCCCcHHHHHHHHHhcCceEEEecCCCCCCc--c-cchhhhcCCceEEEecCCH
Confidence 689999999996321 1 45789999999999 788999999999753321 1 12233 2468999999999
Q ss_pred HhHHHHHhhhhhhhccccccCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHH
Q 003029 172 DIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLK 250 (856)
Q Consensus 172 ~~~~~~y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr 250 (856)
+++++||+||||++|||+|||+.... .|+ +.|++|++||++||++|.+.+++||+||||||||+++|++||
T Consensus 71 ~~~~~yY~gfsn~~LWPlfHy~~~~~--------~~~~~~w~~Y~~VN~~FA~~v~~~~~~~D~VWVHDYhL~llp~~LR 142 (474)
T PRK10117 71 QDYDEYYNQFSNAVLWPAFHYRLDLV--------QFQRPAWEGYLRVNALLADKLLPLLKDDDIIWIHDYHLLPFASELR 142 (474)
T ss_pred HHHHHHHhhhhhcchhhhhCCCCCcc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccHhhHHHHHHH
Confidence 99999999999999999999996432 366 559999999999999999999999999999999999999999
Q ss_pred hcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCC-CceeeCCeeEEEE
Q 003029 251 EYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVA 329 (856)
Q Consensus 251 ~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~-~~v~~~g~~~~v~ 329 (856)
+++|+++||||+|||||++|+|++||+|++|++|||+||+|||||++|++||++||.+++|++... ..+.++|+.++|.
T Consensus 143 ~~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~ 222 (474)
T PRK10117 143 KRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTE 222 (474)
T ss_pred HhCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999987644 4567889999999
Q ss_pred EeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCC
Q 003029 330 AFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR 409 (856)
Q Consensus 330 viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r 409 (856)
++|+|||++.|...+..+ +.+.++.++++++++++|++||||||+|||+++|+||++||++||+|+++|+|+||+.|+|
T Consensus 223 ~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR 301 (474)
T PRK10117 223 VYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSR 301 (474)
T ss_pred EEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCC
Confidence 999999999999887655 4667888999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcC-CCCc
Q 003029 410 TDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-LKKG 488 (856)
Q Consensus 410 ~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~-~~~g 488 (856)
+++++|++++++++++|++||++||+.+|.||+|+++.++++++.|||++|||+++||++||||||++||+|||. +++|
T Consensus 302 ~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~G 381 (474)
T PRK10117 302 GDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPG 381 (474)
T ss_pred CccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999996 7899
Q ss_pred eEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHh
Q 003029 489 VLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565 (856)
Q Consensus 489 ~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~ 565 (856)
+||+|||+|++++| .+|++|||||++++|+||.+||+||.+||++|+++++++|.+||+.+|+++||.+|..+...
T Consensus 382 vLILSefAGaA~~L-~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~~ 457 (474)
T PRK10117 382 VLVLSQFAGAANEL-TSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPR 457 (474)
T ss_pred cEEEecccchHHHh-CCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhc
Confidence 99999999999999 78999999999999999999999999999999999999999999999999999999987543
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-113 Score=972.25 Aligned_cols=454 Identities=32% Similarity=0.607 Sum_probs=421.3
Q ss_pred EEcCCccceeecCCCc--EEEEecCCcHHHhhccc-c-cCCcEEEEeCCCCCCCchhh-HHHH-HhhcCceEEEEecChH
Q 003029 99 VANRLPVSAIRRGEDS--WSLEISAGGLVSALLGV-K-EFEARWIGWAGVNVPDEIGQ-KALT-KALAEKRCIPVFLDED 172 (856)
Q Consensus 99 vsnrlP~~~~~~~~~~--~~~~~~~ggl~~~l~~~-~-~~~~~Wvg~~g~~~~~~~~~-~~~~-~~~~~~~~~pV~l~~~ 172 (856)
||||||++++++++|. |++++++|||++||.++ + ..+|+||||+|...+++++. .... ....+++|.||+|+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 7999999999876665 77799999999999988 4 47799999999753221111 1111 2235689999999999
Q ss_pred hHHHHHhhhhhhhccccccCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHh
Q 003029 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (856)
Q Consensus 173 ~~~~~y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~ 251 (856)
+++.||+||||++|||+|||++... .|+ +.|++|++||++||++|++.++++|+||||||||+++|++||+
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~~--------~~~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWVhDYhL~llp~~LR~ 152 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPERF--------QFREDDWQVFLKVNRAFAEAACLEAAEGATVWVHDYNLWLVPGYIRQ 152 (487)
T ss_pred HHHHHHhhhhhccccccccCCcccc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhHHHHHHHH
Confidence 9999999999999999999986433 466 4599999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCC--------------
Q 003029 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE-------------- 317 (856)
Q Consensus 252 ~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~-------------- 317 (856)
+.|+++||||+|||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++....
T Consensus 153 ~~~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~ 232 (487)
T TIGR02398 153 LRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTAL 232 (487)
T ss_pred hCCCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999875432
Q ss_pred -------ceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHH
Q 003029 318 -------GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (856)
Q Consensus 318 -------~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~ 390 (856)
++.++||.++|.++|+|||++.|.+...++++.+.++.+|++++++++|++|||||++|||+++|+||++||+
T Consensus 233 ~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~ 312 (487)
T TIGR02398 233 GEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLE 312 (487)
T ss_pred cccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHH
Confidence 3778899999999999999999999888888888899999999999999999999999999999999999999
Q ss_pred hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCc
Q 003029 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (856)
Q Consensus 391 ~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~E 470 (856)
+||+++++|+||||+.|+|+++++|++++++++++|++||++||+.+|.||+|+++.++++++.+||++||||++||++|
T Consensus 313 ~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrD 392 (487)
T TIGR02398 313 RRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRD 392 (487)
T ss_pred hCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHhhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHH
Q 003029 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQE 550 (856)
Q Consensus 471 G~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~ 550 (856)
|||||++||||||.+++||||+|||+|+++++ .+|++|||||++++|+||.+||+||.+||++|+++++++|.+||+.+
T Consensus 393 GmNLVa~Eyva~~~~~~GvLILSefaGaa~~l-~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~ 471 (487)
T TIGR02398 393 GLNLVAKEYVAAQGLLDGVLVLSEFAGAAVEL-KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQR 471 (487)
T ss_pred ccCcchhhHHhhhcCCCCCEEEeccccchhhc-CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHH
Confidence 99999999999998889999999999999999 78999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 003029 551 WAETFVSELND 561 (856)
Q Consensus 551 W~~~fl~~l~~ 561 (856)
|+++||.+|..
T Consensus 472 W~~~fl~~l~~ 482 (487)
T TIGR02398 472 WADEFLAAVSP 482 (487)
T ss_pred HHHHHHHHhhh
Confidence 99999998864
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-113 Score=976.11 Aligned_cols=462 Identities=54% Similarity=0.930 Sum_probs=356.1
Q ss_pred cEEEEEcCCccceeecC-CCc--EEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCch--hhHHHHHhhcCceEEEEe
Q 003029 95 RLLVVANRLPVSAIRRG-EDS--WSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEI--GQKALTKALAEKRCIPVF 168 (856)
Q Consensus 95 ~livvsnrlP~~~~~~~-~~~--~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~--~~~~~~~~~~~~~~~pV~ 168 (856)
||||||||||+.+++++ +|. |+++.++|||+++|.++ +..+++||||+|...+.++ ++........+++|+|||
T Consensus 2 ~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~l~~~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV~ 81 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDPLLKKRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPVF 81 (474)
T ss_dssp -------------------------GGGGS-HHHHHHHHHHHHH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEEE
T ss_pred CcccccccccccccccccccccccccccCCCcHHHHHHHHHhcCCCEEEEeCCCcCccccccccchhhhcccCceEEEEE
Confidence 79999999999999876 666 88889999999999999 7789999999998766544 233334567899999999
Q ss_pred cChHhHHHHHhhhhhhhccccccCCCC-CcccccccchhhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHH
Q 003029 169 LDEDIVHQYYNGYCNNILWPLFHYLGL-PQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLP 246 (856)
Q Consensus 169 l~~~~~~~~y~~f~n~~LWp~fH~~~~-~~~~~~~~~~~~~-~~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp 246 (856)
|+++++++||+||||++|||+|||... .+ ....|+ +.|++|++||++||++|.+.+++||+||||||||+++|
T Consensus 82 l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~-----~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~D~VWVhDYhL~llP 156 (474)
T PF00982_consen 82 LSPEEYDGYYNGFCNQVLWPLFHYRLDSRP-----DLARFEEEWWEAYKRVNRRFADAIAEVYRPGDLVWVHDYHLMLLP 156 (474)
T ss_dssp E-HHHHHHHTTTHHHHTHHHHHTT-GG---------G----HHHHHHHHHHHHHHHHHHGGG--TT-EEEEESGGGTTHH
T ss_pred cCHHHHHHHHHhhhhhccCccccccccccc-----ccchhhHHHHHHHHHHHHHHHHHHHHhCcCCCEEEEeCCcHHHHH
Confidence 999999999999999999999998742 11 113466 45999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCC--ceeeCCe
Q 003029 247 KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE--GVEDQGR 324 (856)
Q Consensus 247 ~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~--~v~~~g~ 324 (856)
++||+++|+++||||+|||||++|+|++||+|++||+|||+||+|||||++|++||+++|++++|++.... +++++||
T Consensus 157 ~~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr 236 (474)
T PF00982_consen 157 QMLRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGR 236 (474)
T ss_dssp HHHHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTE
T ss_pred HHHHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999987654 7999999
Q ss_pred eEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcC-CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEE
Q 003029 325 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (856)
Q Consensus 325 ~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~ 403 (856)
.++|.++|+|||++.|.+.+.++++.++++.+++++++ +++|++|||+|++|||.++|+||++||++||+++++|+|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999999899999999999999988 59999999999999999999999999999999999999999
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhc
Q 003029 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (856)
Q Consensus 404 v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~ 483 (856)
|+.|+|+++++|++++++++++|++||++||+.+|.||+|+.+.++++++.+||++|||+++||++||||||++||+|||
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 003029 484 DLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (856)
Q Consensus 484 ~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 561 (856)
.+++|+||+|||+|++++|++++++|||||++++|+||.+||+||++||+.|+++++++|.+||+.+|+++||++|++
T Consensus 397 ~~~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 397 DDNPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLKR 474 (474)
T ss_dssp -TS--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHT
T ss_pred cCCCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhhC
Confidence 989999999999999999965789999999999999999999999999999999999999999999999999999974
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-108 Score=920.04 Aligned_cols=463 Identities=49% Similarity=0.853 Sum_probs=430.6
Q ss_pred CCCCCcEEEEEcCCccceeec-CCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEE
Q 003029 90 TFSRQRLLVVANRLPVSAIRR-GEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPV 167 (856)
Q Consensus 90 ~~~~~~livvsnrlP~~~~~~-~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~pV 167 (856)
+...+|+|+||||+|+...+. +++......++|||+++|.++ +..+++|+||+|...+.++..........++...||
T Consensus 11 ~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~~~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~~v 90 (486)
T COG0380 11 PLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLLRVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSAPV 90 (486)
T ss_pred cccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchhhHhhcceEEecCceeccccccchhhhhccccceEEEE
Confidence 445789999999999998643 466788899999999999999 788999999999887633324445556678999999
Q ss_pred ecChHhHHHHHhhhhhhhccccccCCCCCcccccccchhhHH-HHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHH
Q 003029 168 FLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQS-QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLP 246 (856)
Q Consensus 168 ~l~~~~~~~~y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp 246 (856)
.++++++++||++|||++|||+|||+.... .|++ .|+.|++||++||++|++.+++||+||||||||+++|
T Consensus 91 ~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~~--------~~~~~~w~~Y~~vN~~FAd~i~~~~~~gDiIWVhDYhL~L~P 162 (486)
T COG0380 91 ILSDEDYEGYYNGFSNAILWPLFHYFIDDV--------AYERNWWDAYVKVNRKFADKIVEIYEPGDIIWVHDYHLLLVP 162 (486)
T ss_pred ecCHHHHHHHHHHhhHhhhcceeeeecCcc--------ccchHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEechhhhhH
Confidence 999999999999999999999999995432 3664 4999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCcee---eCC
Q 003029 247 KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE---DQG 323 (856)
Q Consensus 247 ~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~---~~g 323 (856)
++||++.|+++||||+|+|||++|+|+|||+|++|++|||+||+|||||++|++||+++|+++++.. ....++ ++|
T Consensus 163 ~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~-~~~~~~~~~~~~ 241 (486)
T COG0380 163 QMLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVT-GDADIRFNGADG 241 (486)
T ss_pred HHHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccc-ccccccccccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999865 222333 447
Q ss_pred eeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcC-CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEE
Q 003029 324 RLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLL 402 (856)
Q Consensus 324 ~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv 402 (856)
+.+++.++|+|||+..|.....++.++.+..++++.+.+ +++|++|||||++||+.++++||++||++||++++||+|+
T Consensus 242 ~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvli 321 (486)
T COG0380 242 RIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLL 321 (486)
T ss_pred ceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEE
Confidence 999999999999999999998888888888899988876 9999999999999999999999999999999999999999
Q ss_pred EEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhh
Q 003029 403 QIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (856)
Q Consensus 403 ~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~ 482 (856)
||+.|+|+++++|+.++.+++++|++||++||+.+|+||+|++..++++++.+||++||++++||++||||||++||+||
T Consensus 322 Qi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~ 401 (486)
T COG0380 322 QIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAA 401 (486)
T ss_pred EecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003029 483 QDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 483 ~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (856)
|.+++|+||+|||+|++.+| .+|++|||||.+++|++|.+||+|+++||++|++++++.|.+||+++|+.+|+.+|...
T Consensus 402 q~~~~G~LiLSeFaGaa~~L-~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 402 QRDKPGVLILSEFAGAASEL-RDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQA 480 (486)
T ss_pred hcCCCCcEEEeccccchhhh-ccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 99889999999999999999 77999999999999999999999999999999999999999999999999999999863
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-104 Score=905.88 Aligned_cols=452 Identities=56% Similarity=0.919 Sum_probs=421.6
Q ss_pred cEEEEEcCCccceeecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchh-hHHHHHhhcCceEEEEecChH
Q 003029 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIG-QKALTKALAEKRCIPVFLDED 172 (856)
Q Consensus 95 ~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~-~~~~~~~~~~~~~~pV~l~~~ 172 (856)
||||||||+|+.+.++ + +..++|||++||.++ +..+++||||+|...+++++ .........+++|+||||+++
T Consensus 1 ~livvsnr~p~~~~~~--~---~~~~~gGl~~al~~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 75 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG--G---LEPSAGGLAVALLGALKATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLSEE 75 (456)
T ss_pred CEEEEECCCCccccCC--C---CCcCCCCHHHHHHHHHhccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECCHH
Confidence 6999999999988654 2 567899999999998 77899999999986553332 222234567899999999999
Q ss_pred hHHHHHhhhhhhhccccccCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHh
Q 003029 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (856)
Q Consensus 173 ~~~~~y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~ 251 (856)
+++.||+||||++|||+|||++... .|+ +.|++|++||++||++|.+.++++|+||||||||+++|.+||+
T Consensus 76 ~~~~~y~gf~n~~lWPl~H~~~~~~--------~~~~~~w~~Y~~vN~~fA~~i~~~~~~~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 76 DVDGYYNGFSNSTLWPLFHYRPDLI--------RYDRKAWEAYRRVNRLFAEALAPLLQPGDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHhhhhhcchhhccccccc--------ccCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEecchhhHHHHHHHh
Confidence 9999999999999999999996433 466 4599999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEe
Q 003029 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAF 331 (856)
Q Consensus 252 ~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~vi 331 (856)
+.|+++||||+|||||++|+|++||+|++|++|||+||+|||||++|++||+++|.+++|++....++.+.|+.++|.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~vi 227 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAF 227 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999888889999999999999
Q ss_pred ecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCC
Q 003029 332 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD 411 (856)
Q Consensus 332 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~ 411 (856)
|+|||++.|.+....+++.+....+|++++++++|++|||+++.||++.+|+||++|++++|+++++++|+|+++|++++
T Consensus 228 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~ 307 (456)
T TIGR02400 228 PIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGD 307 (456)
T ss_pred cCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccC
Confidence 99999999998877777777888899999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEE
Q 003029 412 VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 491 (856)
Q Consensus 412 ~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lV 491 (856)
+++|.++++++++++++||++||+.+|.||+++.+.++++++.++|++|||||+||++||||||++||||||...+|+||
T Consensus 308 ~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vV 387 (456)
T TIGR02400 308 VPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLI 387 (456)
T ss_pred chHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999866668899
Q ss_pred EeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 003029 492 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560 (856)
Q Consensus 492 lSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 560 (856)
+|+++|+++++ .+|++|||+|++++|+||.++|+|+.+||++|+++++++|.+||+.+|+++||.+|.
T Consensus 388 lS~~~G~~~~l-~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 388 LSEFAGAAQEL-NGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred EeCCCCChHHh-CCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 99999999999 589999999999999999999999999999999999999999999999999999885
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-95 Score=835.36 Aligned_cols=456 Identities=54% Similarity=0.915 Sum_probs=425.2
Q ss_pred cEEEEEcCCccceeecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEEecChHh
Q 003029 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDI 173 (856)
Q Consensus 95 ~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~~ 173 (856)
||||||||+|+.++++++|.|+++.++|||++||.++ +..+++||||+|...+.+++.........+++|+|||+++++
T Consensus 1 ~li~vsnr~p~~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~ 80 (460)
T cd03788 1 RLVVVSNRLPVSIERDGDGEFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSPEE 80 (460)
T ss_pred CEEEEECCCCceeEEcCCCceEeccCCCcHHHHHHHHHhcCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCHHH
Confidence 6999999999999998888999999999999999999 778999999999877655444456677789999999999999
Q ss_pred HHHHHhhhhhhhccccccCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhc
Q 003029 174 VHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY 252 (856)
Q Consensus 174 ~~~~y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~~ 252 (856)
++.||+||||++|||+|||+.... .|+ +.|++|++||+.||++|.+.++++|+||||||||+++|.++|++
T Consensus 81 ~~~~y~~f~~~~LWp~~H~~~~~~--------~~~~~~w~~Y~~vN~~fa~~i~~~~~~~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 81 FEGYYNGFSNEVLWPLFHYRLDLA--------RFDREDWEAYVRVNRKFADAIAEVLRPGDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHhhhhhcchhhcCCCCcc--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeChhhhHHHHHHHhh
Confidence 999999999999999999985432 366 45999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCC-CceeeCCeeEEEEEe
Q 003029 253 NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVAAF 331 (856)
Q Consensus 253 ~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~-~~v~~~g~~~~v~vi 331 (856)
.++++||||+|||||++++|+++|++++|+++|++||+||||+++|++||+++|+++++++... ..++++|+.+++.++
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vi 232 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAF 232 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999987654 678899999999999
Q ss_pred ecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCC
Q 003029 332 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD 411 (856)
Q Consensus 332 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~ 411 (856)
|+|||++.|.+...++++.+..++++..++++++|++|||+++.||+..+|+||++|++++|+++++++|+|||.|++++
T Consensus 233 p~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~ 312 (460)
T cd03788 233 PIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTD 312 (460)
T ss_pred eCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcC
Confidence 99999999998766666666666667667889999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEE
Q 003029 412 VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 491 (856)
Q Consensus 412 ~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lV 491 (856)
++++.++++++++++++||.+||..+|.||+++.+.++.+++.++|++|||||+||.+||||||++|||||+..++|+||
T Consensus 313 ~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV 392 (460)
T cd03788 313 VPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLI 392 (460)
T ss_pred cHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEE
Confidence 99999999999999999999999888999999999999999999999999999999999999999999999876778899
Q ss_pred EeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 003029 492 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (856)
Q Consensus 492 lSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l 559 (856)
+|+++|+++.+ .+|++|||+|++++|++|.++|+|++++++.+++++++++.+||+..|+++|+.+|
T Consensus 393 ~S~~~G~~~~~-~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 393 LSEFAGAAEEL-SGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred Eeccccchhhc-CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 99999999984 89999999999999999999999999999999999999999999999999999887
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=358.10 Aligned_cols=524 Identities=14% Similarity=0.158 Sum_probs=332.5
Q ss_pred CCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhc-----------------CcccHHH-HHHhhcCCEEEE
Q 003029 232 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRT-----------------LPSRSDL-LRAVLAADLVGF 293 (856)
Q Consensus 232 ~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~-----------------lp~~~~i-l~~ll~aDlIgf 293 (856)
.|+||.|+++--.++..|++.. ++|.+++.|.. ..+-++. ++.|-+. -..+..||.|.-
T Consensus 311 pDvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIa 387 (1050)
T TIGR02468 311 PYVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVIT 387 (1050)
T ss_pred CCEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEE
Confidence 6999999999888888888765 68899999963 1121110 1122121 223668999999
Q ss_pred eCHHHHHHHHHHHH-------HHhCcccCCCceeeCCe-eEEEEEeecccChhhhhhhhcCCch-------------HHH
Q 003029 294 HTYDYARHFVSACT-------RILGFEGTPEGVEDQGR-LTRVAAFPIGIDSERFIRALEINPV-------------QVH 352 (856)
Q Consensus 294 ~t~~~~~~Fl~~~~-------~~lg~~~~~~~v~~~g~-~~~v~viP~GID~~~f~~~~~~~~~-------------~~~ 352 (856)
.|..........-. +.|.. ....++..+|+ ..++.|||+|||++.|.+.....+. ...
T Consensus 388 sT~qE~~eq~~lY~~~~~~~~~~~~~-~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~ 466 (1050)
T TIGR02468 388 STRQEIEEQWGLYDGFDVILERKLRA-RARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPI 466 (1050)
T ss_pred eCHHHHHHHHHHhccCCchhhhhhhh-hhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchh
Confidence 99887765432100 11000 00123333332 3389999999999999874221110 001
Q ss_pred HHHHHHHh--cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHH----HHHHHHHHHHH
Q 003029 353 IKELQETF--AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEY----QRLTSQVHEIV 426 (856)
Q Consensus 353 ~~~lr~~~--~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~----~~l~~~l~~lv 426 (856)
...++..+ +++++||+|||+++.||+..+|+||..+.+..+.. ++.+ ++|... +.++. .....++.+++
T Consensus 467 ~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~~li 541 (1050)
T TIGR02468 467 WSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVLKLI 541 (1050)
T ss_pred hHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHHHHH
Confidence 12333333 57889999999999999999999999986543221 2333 344321 11111 12234555666
Q ss_pred HHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc----cEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc
Q 003029 427 GRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL 502 (856)
Q Consensus 427 ~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~A----Dv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l 502 (856)
.+.+-. + .|. |.|+++.++++++|+.| ||||+||++||||++++|||||+ .|||+|+.+|..+.+
T Consensus 542 ~~lgL~----g--~V~-FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcG----lPVVASdvGG~~EII 610 (1050)
T TIGR02468 542 DKYDLY----G--QVA-YPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG----LPMVATKNGGPVDIH 610 (1050)
T ss_pred HHhCCC----C--eEE-ecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhC----CCEEEeCCCCcHHHh
Confidence 554321 1 255 58999999999999998 69999999999999999999994 999999999999887
Q ss_pred --cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHhhh-hc-cc-----c-
Q 003029 503 --GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQ-LR-IK-----Q- 572 (856)
Q Consensus 503 --g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~~-~~-~~-----~- 572 (856)
|.+|++|+|.|++++|++|.++|+++ +.+.++..++++.+..|+|..-++.++..+......+. .+ .. .
T Consensus 611 ~~g~nGlLVdP~D~eaLA~AL~~LL~Dp-elr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~ 689 (1050)
T TIGR02468 611 RVLDNGLLVDPHDQQAIADALLKLVADK-QLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEAS 689 (1050)
T ss_pred ccCCcEEEECCCCHHHHHHHHHHHhhCH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCcccccccccccccc
Confidence 67899999999999999999999854 47777888889999999999999999988877643321 00 00 0
Q ss_pred --CCC-------------------------------Ccch-------HHHHHHHH----------------------hcC
Q 003029 573 --VPP-------------------------------SLRE-------ADSIERYL----------------------RSN 590 (856)
Q Consensus 573 --~~~-------------------------------~l~~-------~~~~~~y~----------------------~s~ 590 (856)
-.+ .++. ...+.... .-.
T Consensus 690 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (1050)
T TIGR02468 690 EDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKGSSAKAQQGSGAGKYPALRRR 769 (1050)
T ss_pred cccCccccccccccchhhccccccccccccccccccccchhhHHHHHHHHHhhccccccccccccccccccccCcccccc
Confidence 000 0010 01111111 112
Q ss_pred CeEEE--EecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhh---cCCCCeEEEEcCCCHhhHHHHhcccC----
Q 003029 591 NRLLI--LGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALC---HDPKTTIVVLSGSDRNVLDKNFQEYN---- 661 (856)
Q Consensus 591 ~rLI~--lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~---~d~g~~V~I~SGR~~~~l~~~~~~l~---- 661 (856)
++||+ +|+|+| +.. .+.+++.++.+. ....+.++++|||+...+...+...+
T Consensus 770 ~~~~via~D~d~~-~~~------------------~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~ 830 (1050)
T TIGR02468 770 KRLFVIAVDCYDD-KDL------------------LQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPT 830 (1050)
T ss_pred ceEEEEEeccCCC-CCh------------------HHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCC
Confidence 45666 899999 222 122333344443 22347799999999999999887653
Q ss_pred --ceEEeeCceEEEecC------Ceeeec--ccccCChHH-HHHHHHHHHHHHhcC--------CCcEEeeecce--EEE
Q 003029 662 --LWLAAENGMFLRCTT------GKWMTT--MPEHLNMEW-VDSLKHVFEYFTERT--------PRSHFEQRETS--LVW 720 (856)
Q Consensus 662 --lgliaenG~~i~~~~------~~w~~~--~~~~~~~~w-~~~v~~i~~~~~~rt--------~gs~ie~k~~s--i~~ 720 (856)
..+||.-|+.|+..+ ..|..- ...+++..| .+.+++.+..+.... ++...+....+ ..+
T Consensus 831 ~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~ 910 (1050)
T TIGR02468 831 DFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCY 910 (1050)
T ss_pred CCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhCCCceE
Confidence 468999999987631 222210 002345667 345665555443311 22233332222 223
Q ss_pred EeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEE--cCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceE-EEEe
Q 003029 721 NYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQ--GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYV-LCIG 797 (856)
Q Consensus 721 ~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~--g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~v-la~G 797 (856)
.|.-.|++.. ...+++.+.|... ...+.++. +..+++|.|...|||.|+++|+.++| ++.+.+ +++|
T Consensus 911 SY~v~d~~~~-~~v~elr~~Lr~~---gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwg------i~l~~v~VfaG 980 (1050)
T TIGR02468 911 AFKVKDPSKV-PPVKELRKLLRIQ---GLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRWG------IELANMAVFVG 980 (1050)
T ss_pred EEEecCcccC-ccHHHHHHHHHhC---CCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcC------CChHHeEEEec
Confidence 3431122211 1234566666221 23445443 34799999999999999999999999 678888 4499
Q ss_pred cCCcc-c-ccc
Q 003029 798 HFLGK-N-CNL 806 (856)
Q Consensus 798 D~~~n-D-e~M 806 (856)
| +.| | ++|
T Consensus 981 d-SGntD~e~L 990 (1050)
T TIGR02468 981 E-SGDTDYEGL 990 (1050)
T ss_pred c-CCCCCHHHH
Confidence 9 999 9 556
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=317.54 Aligned_cols=250 Identities=26% Similarity=0.380 Sum_probs=212.0
Q ss_pred CcchHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHH
Q 003029 576 SLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655 (856)
Q Consensus 576 ~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~ 655 (856)
.+....+.+.|.++++++||+||||||++...+| ....++++++++|++|+++++|.|+|+|||+..+++.
T Consensus 3 ~~~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p---------~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~ 73 (266)
T COG1877 3 ALQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHP---------EAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELER 73 (266)
T ss_pred hhhhhhhccccccccceEEEEeccccccccccCc---------cccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHH
Confidence 4566778889999999999999999999998877 4778999999999999999999999999999999999
Q ss_pred HhcccCceEEeeCceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHH
Q 003029 656 NFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQAR 735 (856)
Q Consensus 656 ~~~~l~lgliaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~ 735 (856)
|++..++|++||||++++..++.|.....+..++.|++.+.+++++|.+++||+++|.|++++.|||++++++....++.
T Consensus 74 ~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~ 153 (266)
T COG1877 74 LFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALAL 153 (266)
T ss_pred hcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHH
Confidence 99966999999999999764455433344567789999999999999999999999999999999999998776655554
Q ss_pred HHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccC-
Q 003029 736 DMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQT- 814 (856)
Q Consensus 736 el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~- 814 (856)
...... . ....+++..|+..||++|.++|||.++++++++.+. ..++++|.|| |.+||+| |++++..
T Consensus 154 ~~~~~~-~---~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~------~~~~~~~aGD-D~TDE~~-F~~v~~~~ 221 (266)
T COG1877 154 AEAATL-I---NELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPF------DGRFPIFAGD-DLTDEDA-FAAVNKLD 221 (266)
T ss_pred HHHHhc-c---ccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCC------CCCcceecCC-CCccHHH-HHhhccCC
Confidence 444333 1 111288999999999999999999999999999872 2358999999 9999999 9999964
Q ss_pred cceEEeCC--CCc-cccCCHHHHHHHHHHHHHHHH
Q 003029 815 ISTVRLDS--SFL-HYLRMKMCMRFLSQNYLMMAR 846 (856)
Q Consensus 815 ~~~v~V~~--~~~-~~l~~~~~~~~~l~~~~~~~~ 846 (856)
+.+|+|+. ..+ +|+..+...+.+|.++..+..
T Consensus 222 ~~~v~v~~~~t~a~~~~~~~~~~~~~l~~~~~~~~ 256 (266)
T COG1877 222 SITVKVGVGSTQAKFRLAGVYGFLRSLYKLLEALG 256 (266)
T ss_pred CceEEecCCcccccccccccHHHHHHHHHHHHHhh
Confidence 56666654 333 999999999999999988775
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=320.29 Aligned_cols=222 Identities=33% Similarity=0.535 Sum_probs=153.0
Q ss_pred EEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeCceEEEe
Q 003029 595 ILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRC 674 (856)
Q Consensus 595 ~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaenG~~i~~ 674 (856)
||||||||++..++| ....++++++++|++|+++++|.|+|+|||+...++.+++..+++++|+||++++.
T Consensus 1 ~lDyDGTL~p~~~~p---------~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~ 71 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDP---------DAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRR 71 (235)
T ss_dssp EEE-TTTSS---S-G---------GG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEE
T ss_pred CcccCCccCCCCCCc---------cccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEecc
Confidence 799999999998777 47789999999999999999999999999999996666665589999999999997
Q ss_pred cCC-eeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCC-CCeE
Q 003029 675 TTG-KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN-ASVE 752 (856)
Q Consensus 675 ~~~-~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~-~~v~ 752 (856)
.++ .|... +...+..|++.+.++++.+.+++||+++|.|+++++|||++++++++..+++++.+++ .+.... .+++
T Consensus 72 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l-~~~~~~~~~~~ 149 (235)
T PF02358_consen 72 PGGSEWTNL-PADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQL-REILASHPGLE 149 (235)
T ss_dssp TTE-EEE-T-TGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHH-HHHHHHH-T-E
T ss_pred Ccccccccc-ccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHH-HHHHHhCCCEE
Confidence 655 45532 2456778999999999999999999999999999999999999999888888888888 433333 4889
Q ss_pred EEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccC---cceEEeCCC------
Q 003029 753 VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQT---ISTVRLDSS------ 823 (856)
Q Consensus 753 v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~---~~~v~V~~~------ 823 (856)
++.|+++|||+|.+++||.|+++|+++++.+ ..++++++|+|| |.+||+| |++++.. +++|+|++.
T Consensus 150 v~~g~~~vEvrp~~~~KG~av~~ll~~~~~~---~~~~~~~l~~GD-D~tDE~~-f~~~~~~~~~~~~i~V~~~~~~~~~ 224 (235)
T PF02358_consen 150 VVPGKKVVEVRPPGVNKGSAVRRLLEELPFA---GPKPDFVLYIGD-DRTDEDA-FRALRELEEGGFGIKVGSVSVGEKP 224 (235)
T ss_dssp EEE-SSEEEEE-TT--HHHHHHHHHTTS------------EEEEES-SHHHHHH-HHTTTTS----EEEEES--------
T ss_pred EEECCCEEEEEeCCCChHHHHHHHHHhcCcc---ccccceeEEecC-CCCCHHH-HHHHHhcccCCCCeEEEeecccccc
Confidence 9999999999999999999999999998731 123689999999 9999999 9999997 899999763
Q ss_pred -Cc-cccCCHH
Q 003029 824 -FL-HYLRMKM 832 (856)
Q Consensus 824 -~~-~~l~~~~ 832 (856)
+| |||++|.
T Consensus 225 t~A~y~l~~p~ 235 (235)
T PF02358_consen 225 TAASYRLDDPS 235 (235)
T ss_dssp -----------
T ss_pred cccccccccCC
Confidence 23 9999873
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-34 Score=313.25 Aligned_cols=242 Identities=17% Similarity=0.221 Sum_probs=195.5
Q ss_pred HHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 583 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 583 ~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
+.+|.+++++++||||||||++.+++| ..+.++++++++|++|+++ ..|+|+|||++..++++++..++
T Consensus 111 ~~~~~~~k~~~LfLDyDGTLaPIv~~P---------d~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~~~l 179 (384)
T PLN02580 111 IANFAKGKKIALFLDYDGTLSPIVDDP---------DRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGLTEL 179 (384)
T ss_pred HHHHhhcCCeEEEEecCCccCCCCCCc---------ccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCCCCc
Confidence 457899999999999999999999888 4788999999999999975 47999999999999999998899
Q ss_pred eEEeeCceEEEecC-----Ceeeeccc-----------ccCChHHHHHHHHHHHH---HHhcCCCcEEeeecceEEEEee
Q 003029 663 WLAAENGMFLRCTT-----GKWMTTMP-----------EHLNMEWVDSLKHVFEY---FTERTPRSHFEQRETSLVWNYK 723 (856)
Q Consensus 663 gliaenG~~i~~~~-----~~w~~~~~-----------~~~~~~w~~~v~~i~~~---~~~rt~gs~ie~k~~si~~~y~ 723 (856)
+++++||++++... ..|...+. ......|.+.+.++++. ++.+++|+++|.|+++++||||
T Consensus 180 ~laGsHG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR 259 (384)
T PLN02580 180 YYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYR 259 (384)
T ss_pred cEEEeCCceeecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeC
Confidence 99999999997421 11221100 01245677666666665 5667799999999999999999
Q ss_pred cCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEe-CCCCHHHHHHHHHHHhCcCCcCCCCcce--EEEEecCC
Q 003029 724 YADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRA-VGVTKGAAIDRILAEIVHSKKMKTAIDY--VLCIGHFL 800 (856)
Q Consensus 724 ~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p-~gvnKG~av~~ll~~l~~~~~~~~~~d~--vla~GD~~ 800 (856)
++++++...++.++...+ .. ...+.+..|++++||+| .++|||.|+++|+++++++ ..++ ++|||| |
T Consensus 260 ~a~~~~~~~~~~~l~~~l-~~---~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~-----~~d~~~pi~iGD-D 329 (384)
T PLN02580 260 NVDEKNWPLVAQCVHDVL-KK---YPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLS-----NCDDVLPIYIGD-D 329 (384)
T ss_pred CCCchHHHHHHHHHHHHH-Hh---CCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhcCCC-----cccceeEEEECC-C
Confidence 998887666666666655 32 12478899999999999 5999999999999999842 1223 599999 9
Q ss_pred cccccccccccccC--cceEEeCC----CCc-cccCCHHHHHHHHHHHHHHHH
Q 003029 801 GKNCNLPLQFLMQT--ISTVRLDS----SFL-HYLRMKMCMRFLSQNYLMMAR 846 (856)
Q Consensus 801 ~nDe~M~f~~~~~~--~~~v~V~~----~~~-~~l~~~~~~~~~l~~~~~~~~ 846 (856)
.|||+| |++++.. +++|.|++ ..| |||++|.+|+.||+.|+.-.+
T Consensus 330 ~TDedm-F~~L~~~~~G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~~ 381 (384)
T PLN02580 330 RTDEDA-FKVLREGNRGYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWKK 381 (384)
T ss_pred chHHHH-HHhhhccCCceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhhh
Confidence 999999 9998763 78888874 223 999999999999999987654
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-34 Score=309.34 Aligned_cols=239 Identities=15% Similarity=0.228 Sum_probs=190.8
Q ss_pred HHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEE
Q 003029 586 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLA 665 (856)
Q Consensus 586 y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgli 665 (856)
..++++++|||||||||++.+++| ....++++++++|++|++ +..|+|+|||++..+.++++..+++++
T Consensus 93 ~~~~~~~ll~lDyDGTL~PIv~~P---------~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~~~~l~la 161 (354)
T PLN02151 93 KSEGKQIVMFLDYDGTLSPIVDDP---------DRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVKLTELYYA 161 (354)
T ss_pred hhcCCceEEEEecCccCCCCCCCc---------ccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcCCccceEE
Confidence 355678999999999999998888 366899999999999996 568999999999999999987789999
Q ss_pred eeCceEEEec--CCeeee----cccccCChHHHHHHHHHHHHH---HhcCCCcEEeeecceEEEEeecCChhhhHHHHHH
Q 003029 666 AENGMFLRCT--TGKWMT----TMPEHLNMEWVDSLKHVFEYF---TERTPRSHFEQRETSLVWNYKYADVEFGRIQARD 736 (856)
Q Consensus 666 aenG~~i~~~--~~~w~~----~~~~~~~~~w~~~v~~i~~~~---~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~e 736 (856)
++||++++.. +..|+. .. ......|.+.+.++++.+ +.++||+++|.|.++++||||+++++.. .+
T Consensus 162 GsHG~e~~~p~~g~~~~~~~~~~~-~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~~----~~ 236 (354)
T PLN02151 162 GSHGMDIKGPEQGSKYKKENQSLL-CQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEENKW----SD 236 (354)
T ss_pred EeCCceeecCCCCccccccccccc-cccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChHHH----HH
Confidence 9999999843 234631 11 123557888888877665 4789999999999999999999976521 23
Q ss_pred HHHHHhcCCCCCCC-eEEEEcCcEEEEEeC-CCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCccccccccccccc-
Q 003029 737 MLQHLWTGPISNAS-VEVVQGSKSVEVRAV-GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQ- 813 (856)
Q Consensus 737 l~~~L~~~~~~~~~-v~v~~g~~~vEV~p~-gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~- 813 (856)
+..++ ..++.+.+ +.+..|++++||+|. ++|||.|+++|++.++... ...++++|||| |.|||+| |++++.
T Consensus 237 l~~~l-~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~---~~~~~pvyiGD-D~TDEDa-F~~L~~~ 310 (354)
T PLN02151 237 LANQV-RSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYAN---CTDVFPIYIGD-DRTDEDA-FKILRDK 310 (354)
T ss_pred HHHHH-HHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhccccc---CCCCeEEEEcC-CCcHHHH-HHHHhhc
Confidence 33444 33333433 789999999999995 9999999999999987421 12468999999 9999999 999975
Q ss_pred -CcceEEeCC----CCc-cccCCHHHHHHHHHHHHHHHH
Q 003029 814 -TISTVRLDS----SFL-HYLRMKMCMRFLSQNYLMMAR 846 (856)
Q Consensus 814 -~~~~v~V~~----~~~-~~l~~~~~~~~~l~~~~~~~~ 846 (856)
.+++|+|+. +.| |||++|.+|+.||+.|+...+
T Consensus 311 ~~G~gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~~~ 349 (354)
T PLN02151 311 KQGLGILVSKYAKETNASYSLQEPDEVMEFLERLVEWKQ 349 (354)
T ss_pred CCCccEEeccCCCCCcceEeCCCHHHHHHHHHHHHHhhh
Confidence 367888862 234 999999999999999987543
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=307.44 Aligned_cols=249 Identities=14% Similarity=0.203 Sum_probs=193.5
Q ss_pred cchHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHH
Q 003029 577 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 656 (856)
Q Consensus 577 l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~ 656 (856)
|+.-.-+.++.+.++.+||+||||||++.+++| ....++++++++|++|++ ++.|+|+|||++..+.++
T Consensus 97 l~~~~~~~~~~~~k~~llflD~DGTL~Piv~~p---------~~a~i~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~ 165 (366)
T PLN03017 97 LEMFEQIMEASRGKQIVMFLDYDGTLSPIVDDP---------DKAFMSSKMRRTVKKLAK--CFPTAIVTGRCIDKVYNF 165 (366)
T ss_pred HHHHHHHHHHhcCCCeEEEEecCCcCcCCcCCc---------ccccCCHHHHHHHHHHhc--CCcEEEEeCCCHHHHHHh
Confidence 333334445556788999999999999887766 245899999999999994 789999999999999999
Q ss_pred hcccCceEEeeCceEEEecCCeeee-------cccccCChHHHHHHHHH---HHHHHhcCCCcEEeeecceEEEEeecCC
Q 003029 657 FQEYNLWLAAENGMFLRCTTGKWMT-------TMPEHLNMEWVDSLKHV---FEYFTERTPRSHFEQRETSLVWNYKYAD 726 (856)
Q Consensus 657 ~~~l~lgliaenG~~i~~~~~~w~~-------~~~~~~~~~w~~~v~~i---~~~~~~rt~gs~ie~k~~si~~~y~~~d 726 (856)
++..+++++++||++++..++.|.. .. ......|++.+.++ ++.+++++||+++|+|+++++||||+++
T Consensus 166 ~~l~~l~l~g~hGa~i~~p~~~~~~~~~~~~~~~-~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad 244 (366)
T PLN03017 166 VKLAELYYAGSHGMDIKGPAKGFSRHKRVKQSLL-YQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVD 244 (366)
T ss_pred hcccCceEEEcCCcEEecCCCcceeccccccccc-cccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCC
Confidence 7665789999999999854333321 00 01233577666666 5567788999999999999999999997
Q ss_pred hhhhHHHHHHHHHHHhcCCCCCC-CeEEEEcCcEEEEEeC-CCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccc
Q 003029 727 VEFGRIQARDMLQHLWTGPISNA-SVEVVQGSKSVEVRAV-GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNC 804 (856)
Q Consensus 727 ~e~~~~qa~el~~~L~~~~~~~~-~v~v~~g~~~vEV~p~-gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe 804 (856)
++.. .++..++ ...+.+. .+++..|++.+||+|. ++|||.|+++|++.++... ...++++|||| |.+||
T Consensus 245 ~~~~----~~l~~~~-~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~---~~~~~pvyiGD-D~TDE 315 (366)
T PLN03017 245 EKKW----SELVLQV-RSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGN---TNNVFPVYIGD-DRTDE 315 (366)
T ss_pred HHHH----HHHHHHH-HHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhccccc---CCCceEEEeCC-CCccH
Confidence 7542 2333333 3223333 4789999999999995 9999999999999987421 12468999999 99999
Q ss_pred ccccccccc--CcceEEeCC----CCc-cccCCHHHHHHHHHHHHHHHHh
Q 003029 805 NLPLQFLMQ--TISTVRLDS----SFL-HYLRMKMCMRFLSQNYLMMARA 847 (856)
Q Consensus 805 ~M~f~~~~~--~~~~v~V~~----~~~-~~l~~~~~~~~~l~~~~~~~~~ 847 (856)
+| |++++. .+++|+|+. ..| |+|++|.+|+.||+.|+.-.+.
T Consensus 316 Da-F~~L~~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~~~ 364 (366)
T PLN03017 316 DA-FKMLRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEWKQM 364 (366)
T ss_pred HH-HHHHhhcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHHhh
Confidence 99 999986 479999983 233 9999999999999999887654
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-33 Score=294.22 Aligned_cols=230 Identities=20% Similarity=0.259 Sum_probs=194.1
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeC
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAEN 668 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaen 668 (856)
|++++|+|||||||++..++| ....++++++++|++|++++++.|+|+|||+...+...+...+++++++|
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p---------~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~h 71 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDP---------DAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEH 71 (244)
T ss_pred CCcEEEEEecCccccCCcCCC---------cccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEeec
Confidence 578999999999999987766 35778999999999999999999999999999888776655578999999
Q ss_pred ceEEEecCC--eeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecC-ChhhhHHHHHHHHHHHhcCC
Q 003029 669 GMFLRCTTG--KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYA-DVEFGRIQARDMLQHLWTGP 745 (856)
Q Consensus 669 G~~i~~~~~--~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~-d~e~~~~qa~el~~~L~~~~ 745 (856)
|++++.++. .|... ......|++.+.++++.+.++ ||+++|.|+.+++|||+.+ +++++..|+.++..++ ..
T Consensus 72 G~~~~~~g~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~-~~- 146 (244)
T TIGR00685 72 GCEMKDNGSCQDWVNL--TEKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKI-LS- 146 (244)
T ss_pred CEEEecCCCcceeeec--hhhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHH-hc-
Confidence 999985322 35432 122357999999999999887 9999999999999999999 8888888888888776 32
Q ss_pred CCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccc----c-CcceEEe
Q 003029 746 ISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLM----Q-TISTVRL 820 (856)
Q Consensus 746 ~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~----~-~~~~v~V 820 (856)
..++.++.|+.++|++|.++|||.++++++++++ ...++++|||| +.||++| |++++ . .+.+|.|
T Consensus 147 --~~~~~v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~------~~~~~~i~iGD-~~~D~~~-~~~~~~~~~~~g~~~v~v 216 (244)
T TIGR00685 147 --FTDLEVMDGKAVVELKPRFVNKGEIVKRLLWHQP------GSGISPVYLGD-DITDEDA-FRVVNNQWGNYGFYPVPI 216 (244)
T ss_pred --CCCEEEEECCeEEEEeeCCCCHHHHHHHHHHhcc------cCCCceEEEcC-CCcHHHH-HHHHhcccCCCCeEEEEE
Confidence 2368889999999999999999999999999998 45689999999 9999999 99993 2 3578888
Q ss_pred --CC--C-CccccCCHHHHHHHHHHHH
Q 003029 821 --DS--S-FLHYLRMKMCMRFLSQNYL 842 (856)
Q Consensus 821 --~~--~-~~~~l~~~~~~~~~l~~~~ 842 (856)
+. + +.|+++++.+|.++|+.|+
T Consensus 217 ~~g~~~~~A~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 217 GSGSKKTVAKFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred ecCCcCCCceEeCCCHHHHHHHHHHHh
Confidence 43 2 3399999999999998875
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=293.57 Aligned_cols=232 Identities=17% Similarity=0.144 Sum_probs=189.7
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeCce
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGM 670 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaenG~ 670 (856)
.++|++||||||++...+| ..+.++++++++|++|++++|+.|+|+|||+...+.++++.++++++++||+
T Consensus 14 ~~li~~D~DGTLl~~~~~p---------~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa 84 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHP---------DQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGA 84 (266)
T ss_pred CEEEEEecCCCCCCCCCCc---------ccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCC
Confidence 6899999999999987666 3668999999999999977899999999999999999999888889999999
Q ss_pred EEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCC
Q 003029 671 FLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNAS 750 (856)
Q Consensus 671 ~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~ 750 (856)
+++..++.|.. ...+.+|...+...++.+..++||+++|.|+.+++|||+.++.+. ....++.+.+ .+.. ..
T Consensus 85 ~i~~~~~~~~~---~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~~--~~~~~l~~~i-~~~~--~~ 156 (266)
T PRK10187 85 ERRDINGKTHI---VHLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQHE--DALLALAQRI-TQIW--PQ 156 (266)
T ss_pred eeecCCCCeee---ccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCccH--HHHHHHHHHH-HhhC--Cc
Confidence 99864444432 234566777788888888888999999999999999998773221 1122333333 2111 13
Q ss_pred eEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCccccccccccccc-CcceEEeCCC---Ccc
Q 003029 751 VEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQ-TISTVRLDSS---FLH 826 (856)
Q Consensus 751 v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~-~~~~v~V~~~---~~~ 826 (856)
+.+..|+.++||+|+++|||.|+++++++++ +..++++|||| +.||++| |++++. .+++|.|++. ++|
T Consensus 157 ~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~------~~~~~v~~~GD-~~nD~~m-f~~~~~~~g~~vavg~a~~~A~~ 228 (266)
T PRK10187 157 LALQPGKCVVEIKPRGTNKGEAIAAFMQEAP------FAGRTPVFVGD-DLTDEAG-FAVVNRLGGISVKVGTGATQASW 228 (266)
T ss_pred eEEeCCCEEEEeeCCCCCHHHHHHHHHHhcC------CCCCeEEEEcC-CccHHHH-HHHHHhcCCeEEEECCCCCcCeE
Confidence 5677899999999999999999999999998 55789999999 9999999 999954 4788999874 349
Q ss_pred ccCCHHHHHHHHHHHHHHHHh
Q 003029 827 YLRMKMCMRFLSQNYLMMARA 847 (856)
Q Consensus 827 ~l~~~~~~~~~l~~~~~~~~~ 847 (856)
+|++|.+|+.||+.|+...+-
T Consensus 229 ~l~~~~~v~~~L~~l~~~~~~ 249 (266)
T PRK10187 229 RLAGVPDVWSWLEMITTAQQQ 249 (266)
T ss_pred eCCCHHHHHHHHHHHHHhhhc
Confidence 999999999999999976653
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.8e-25 Score=262.62 Aligned_cols=321 Identities=15% Similarity=0.186 Sum_probs=220.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhc-----CCCCeEEEEEecC-----CCchhhh-hcCccc-
Q 003029 211 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY-----NSDMKVGWFLHTP-----FPSSEIH-RTLPSR- 278 (856)
Q Consensus 211 w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~~-----~~~~~i~~flH~P-----fP~~e~f-r~lp~~- 278 (856)
...|.-+.++.++.+...-..+||||+||||..++|.++++. ..++++.|++|.- ||...+- ..+|+.
T Consensus 590 ~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~ 669 (977)
T PLN02939 590 FKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQ 669 (977)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHH
Confidence 344444455555544443235699999999999985544431 3567899999984 3322211 122311
Q ss_pred --------------HH-HHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhh
Q 003029 279 --------------SD-LLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRA 343 (856)
Q Consensus 279 --------------~~-il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~ 343 (856)
-. +..++..||.|..-++.|++.... ..--|++. .+..+..++.+||||||++.|.|.
T Consensus 670 l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~-----~L~~~~~Kl~gIlNGID~e~wnPa 742 (977)
T PLN02939 670 LDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD-----TLKFHSKKFVGILNGIDTDTWNPS 742 (977)
T ss_pred ccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH-----HhccccCCceEEecceehhhcCCc
Confidence 11 224677899999999999887553 11011110 022345688999999999999875
Q ss_pred hcC-------C-ch---HHHHHHHHHHhc------CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEc
Q 003029 344 LEI-------N-PV---QVHIKELQETFA------GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 406 (856)
Q Consensus 344 ~~~-------~-~~---~~~~~~lr~~~~------~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~ 406 (856)
... . .. ......++++++ +.++|++|||+++.||++.+++|+..+++ ++ +.|+++|.
T Consensus 743 tD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d----vqLVIvGd 816 (977)
T PLN02939 743 TDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG----GQFVLLGS 816 (977)
T ss_pred cccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----CEEEEEeC
Confidence 310 0 00 011234677763 35899999999999999999999998874 23 45777774
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCC
Q 003029 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 486 (856)
Q Consensus 407 p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~ 486 (856)
+ ++ ..+++++++++.+++.. ..|.| .+.++......+|++||+||+||.+|||||+++|||+|+
T Consensus 817 G-----p~-~~~e~eL~~La~~l~l~------drV~F-lG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyG--- 880 (977)
T PLN02939 817 S-----PV-PHIQREFEGIADQFQSN------NNIRL-ILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYG--- 880 (977)
T ss_pred C-----Cc-HHHHHHHHHHHHHcCCC------CeEEE-EeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCC---
Confidence 2 21 13455666666654321 13554 677887888899999999999999999999999999994
Q ss_pred CceEEEeCCCCchhhc-----------cCCeEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHhcCHHHHH
Q 003029 487 KGVLILSEFAGAAQSL-----------GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHVTTHTAQEWA 552 (856)
Q Consensus 487 ~g~lVlSe~aG~~~~l-----------g~~g~lVnP~d~~~lA~ai~~aL~---~~~~er~~r~~~~~~~v~~~~~~~W~ 552 (856)
.|+|++..+|..+.+ |.+|++|+|.|+++++++|.+++. ..++.+..+.++. ....++|...+
T Consensus 881 -tPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~a--m~~dFSWe~~A 957 (977)
T PLN02939 881 -SVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKD--MNIDFSWDSSA 957 (977)
T ss_pred -CCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHH--HHhcCCHHHHH
Confidence 799999999998766 247999999999999999999986 2454555555433 34679999999
Q ss_pred HHHHHHHHHhH
Q 003029 553 ETFVSELNDTV 563 (856)
Q Consensus 553 ~~fl~~l~~~~ 563 (856)
+.++.-+..+.
T Consensus 958 ~qYeeLY~~ll 968 (977)
T PLN02939 958 SQYEELYQRAV 968 (977)
T ss_pred HHHHHHHHHHH
Confidence 99988777654
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=253.20 Aligned_cols=300 Identities=23% Similarity=0.207 Sum_probs=208.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCC
Q 003029 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAAD 289 (856)
Q Consensus 210 ~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aD 289 (856)
.+..|...++.++..+.. ....|+||+|+++.+.++...+. ...|+.+++|+++.... . ..++.+...+..+|
T Consensus 65 ~~~~~~~~~~~~~~~~~~-~~~~Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~--~--~~~~~~~~~~~~~d 137 (372)
T cd03792 65 EKEIYLEWNEENAERPLL-DLDADVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN--R--RVWDFLQPYIEDYD 137 (372)
T ss_pred HHHHHHHHHHHHhccccc-cCCCCEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc--H--HHHHHHHHHHHhCC
Confidence 467777777777655322 22569999999998777666543 36788899999875321 0 01122333445678
Q ss_pred EEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceE
Q 003029 290 LVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVM 366 (856)
Q Consensus 290 lIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iI 366 (856)
.+.+.+.++++.+ + . ..++ ++|+|||+........+ .+....+++++ .++++|
T Consensus 138 ~~i~~~~~~~~~~----------------~--~--~~~~-vipngvd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i 193 (372)
T cd03792 138 AAVFHLPEYVPPQ----------------V--P--PRKV-IIPPSIDPLSGKNRELS---PADIEYILEKYGIDPERPYI 193 (372)
T ss_pred EEeecHHHhcCCC----------------C--C--CceE-EeCCCCCCCccccCCCC---HHHHHHHHHHhCCCCCCcEE
Confidence 8777663322111 0 1 1234 89999997542211111 12233455555 378899
Q ss_pred EEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCC
Q 003029 367 LGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 446 (856)
Q Consensus 367 l~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g 446 (856)
++|||+++.||++.+|+||+.+.+..|++ .|+++|.+... .+++.++.+++.+ ..+. ...|.++..
T Consensus 194 ~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~----~l~i~G~g~~~-~~~~~~~~~~~~~---~~~~------~~~v~~~~~ 259 (372)
T cd03792 194 TQVSRFDPWKDPFGVIDAYRKVKERVPDP----QLVLVGSGATD-DPEGWIVYEEVLE---YAEG------DPDIHVLTL 259 (372)
T ss_pred EEEeccccccCcHHHHHHHHHHHhhCCCC----EEEEEeCCCCC-CchhHHHHHHHHH---HhCC------CCCeEEEec
Confidence 99999999999999999999998887775 48888764321 1223332233222 2111 113665433
Q ss_pred C-CCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHH
Q 003029 447 S-LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIAR 523 (856)
Q Consensus 447 ~-v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~ 523 (856)
. ++.+++.++|++||+|++||.+||||++++|||||+ .|+|+|+.+|..+.+ |.+|+++++ .+++|++|.+
T Consensus 260 ~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G----~Pvv~s~~~~~~~~i~~~~~g~~~~~--~~~~a~~i~~ 333 (372)
T cd03792 260 PPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKG----KPVIAGPVGGIPLQIEDGETGFLVDT--VEEAAVRILY 333 (372)
T ss_pred CCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC----CCEEEcCCCCchhhcccCCceEEeCC--cHHHHHHHHH
Confidence 3 499999999999999999999999999999999994 899999999999888 567998874 6789999999
Q ss_pred HHcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHH
Q 003029 524 ALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 561 (856)
Q Consensus 524 aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 561 (856)
++++ ++++.++.+++++++ ..++|...++++++.+++
T Consensus 334 ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 334 LLRD-PELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHcC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 9986 457788888888887 579999999999887764
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-24 Score=246.37 Aligned_cols=273 Identities=18% Similarity=0.218 Sum_probs=203.9
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHH
Q 003029 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (856)
Q Consensus 230 ~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (856)
...|+|++|+.. .+...++++.|++++.+.+|..|.. +.+ ..++.|.+.+.. ...++. +.
T Consensus 98 ~~~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~~-~~~-------------~~~~~ii~~S~~-~~~~~~---~~ 157 (380)
T PRK15484 98 TKDSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFEP-ELL-------------DKNAKIIVPSQF-LKKFYE---ER 157 (380)
T ss_pred CCCcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccCh-hHh-------------ccCCEEEEcCHH-HHHHHH---hh
Confidence 357999999843 3445567778999999999987631 111 135777776643 333322 11
Q ss_pred hCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHHHHHHHH
Q 003029 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFE 386 (856)
Q Consensus 310 lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~~L~Af~ 386 (856)
+ ...++.++|+|||.+.|.+.. ...+++++ .++++|+++||+.+.||++.+|+|+.
T Consensus 158 ~-------------~~~~i~vIpngvd~~~~~~~~--------~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 158 L-------------PNADISIVPNGFCLETYQSNP--------QPNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred C-------------CCCCEEEecCCCCHHHcCCcc--------hHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHH
Confidence 1 123578999999998876421 11233344 26789999999999999999999999
Q ss_pred HHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 003029 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (856)
Q Consensus 387 ~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~ 466 (856)
.+.+++|++ .|+++|.+......+...+.+++++++.+++. .++ |.|.++.+++..+|+.||++|+|
T Consensus 217 ~l~~~~p~~----~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v~-~~G~~~~~~l~~~~~~aDv~v~p 283 (380)
T PRK15484 217 KLATAHSNL----KLVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RCI-MLGGQPPEKMHNYYPLADLVVVP 283 (380)
T ss_pred HHHHhCCCe----EEEEEeCCccccccchhHHHHHHHHHHHhcCC--------cEE-EeCCCCHHHHHHHHHhCCEEEeC
Confidence 999888875 48888865432222334556677777665432 255 48899999999999999999999
Q ss_pred CC-CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeE-EECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 003029 467 SL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAI-LVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (856)
Q Consensus 467 S~-~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~-lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~ 542 (856)
|. .||||++++|||||+ .|+|+|..+|..+.+ |.+|+ +++|.|++++|++|.++++++. +.+++++++++
T Consensus 284 S~~~E~f~~~~lEAma~G----~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~--~~~~~~~ar~~ 357 (380)
T PRK15484 284 SQVEEAFCMVAVEAMAAG----KPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPE--LTQIAEQAKDF 357 (380)
T ss_pred CCCccccccHHHHHHHcC----CCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHH--HHHHHHHHHHH
Confidence 97 499999999999994 899999999998887 56787 6789999999999999998764 45677777766
Q ss_pred H-HhcCHHHHHHHHHHHHHHh
Q 003029 543 V-TTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 543 v-~~~~~~~W~~~fl~~l~~~ 562 (856)
+ +.++|..-++++++.|++.
T Consensus 358 ~~~~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 358 VFSKYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred HHHhCCHHHHHHHHHHHHHHh
Confidence 5 7889999999998888653
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.8e-25 Score=254.82 Aligned_cols=296 Identities=23% Similarity=0.283 Sum_probs=203.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcC----CCCeEEEEEecCCC----chhhhhc--Ccc-------------cHHHHHHhhc
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYN----SDMKVGWFLHTPFP----SSEIHRT--LPS-------------RSDLLRAVLA 287 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~----~~~~i~~flH~PfP----~~e~fr~--lp~-------------~~~il~~ll~ 287 (856)
..|+||+||||..++|.++++.. .+.++.++.|..-. +.+.+.. +|+ ..-+..++..
T Consensus 118 ~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (466)
T PRK00654 118 RPDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYY 197 (466)
T ss_pred CCceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHh
Confidence 67999999999999999998653 46899999998621 1111111 111 1112235677
Q ss_pred CCEEEEeCHHHHHHHHHHHHHHhCcccCCCcee--eCCeeEEEEEeecccChhhhhhhhcCC-----------chHHHHH
Q 003029 288 ADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRALEIN-----------PVQVHIK 354 (856)
Q Consensus 288 aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~--~~g~~~~v~viP~GID~~~f~~~~~~~-----------~~~~~~~ 354 (856)
||.|...++.+++..... ..| .++. +..+..++.+||||||.+.|.+..... ...+...
T Consensus 198 ad~vitvS~~~~~ei~~~---~~~-----~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~ 269 (466)
T PRK00654 198 ADRVTTVSPTYAREITTP---EFG-----YGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKR 269 (466)
T ss_pred cCcCeeeCHHHHHHhccc---cCC-----cChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHH
Confidence 888877777666543210 000 0000 112345799999999999987642100 0011233
Q ss_pred HHHHHhc----CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhh
Q 003029 355 ELQETFA----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRIN 430 (856)
Q Consensus 355 ~lr~~~~----~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN 430 (856)
.++++++ +.++|++|||+++.||++.+++|+++++++ ++.|+++|.+ + + .+++++++++.+.+
T Consensus 270 ~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~------~~~lvivG~g---~-~---~~~~~l~~l~~~~~ 336 (466)
T PRK00654 270 ALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ------GGQLVLLGTG---D-P---ELEEAFRALAARYP 336 (466)
T ss_pred HHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc------CCEEEEEecC---c-H---HHHHHHHHHHHHCC
Confidence 4666663 568999999999999999999999998753 2557777642 1 2 23456666665543
Q ss_pred cccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--c-----
Q 003029 431 GRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G----- 503 (856)
Q Consensus 431 ~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g----- 503 (856)
. .+.++.+. +.+.+..+|++||+||+||.+||||++.+|||+|+ .|+|+|+.+|..+.+ +
T Consensus 337 ~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G----~p~V~~~~gG~~e~v~~~~~~~~ 403 (466)
T PRK00654 337 G--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYG----TLPIVRRTGGLADTVIDYNPEDG 403 (466)
T ss_pred C--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCC----CCEEEeCCCCccceeecCCCCCC
Confidence 2 25554554 66677899999999999999999999999999994 899999999999987 3
Q ss_pred -CCeEEECCCCHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003029 504 -AGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 504 -~~g~lVnP~d~~~lA~ai~~aL~~--~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (856)
.+|++|+|.|+++++++|.++++. .++.+.++..+.+ ...++|..=++++++-++++
T Consensus 404 ~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 404 EATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred CCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 569999999999999999999863 2233444444433 25788888888887766654
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-24 Score=263.47 Aligned_cols=310 Identities=15% Similarity=0.121 Sum_probs=221.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhc-----CCCCeEEEEEecCCCchhhhhcCcccHHHHHHh
Q 003029 211 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY-----NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV 285 (856)
Q Consensus 211 w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~~-----~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~l 285 (856)
..-|-.+++..++.+.+.-...||||+||+|..++|.+++.. .+++++.+++|..-. ....+-.++
T Consensus 689 ~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~~---------~~n~lk~~l 759 (1036)
T PLN02316 689 GERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLEF---------GANHIGKAM 759 (1036)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCccc---------chhHHHHHH
Confidence 444555566666555544345799999999999999999874 356899999996421 112244567
Q ss_pred hcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcC--C-----c----h-HHHH
Q 003029 286 LAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI--N-----P----V-QVHI 353 (856)
Q Consensus 286 l~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~--~-----~----~-~~~~ 353 (856)
..||.|.--++.|++..... + . ...+..++.+||||||++.|.+.... | + . ....
T Consensus 760 ~~AD~ViTVS~tya~EI~~~-----~------~--l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k 826 (1036)
T PLN02316 760 AYADKATTVSPTYSREVSGN-----S------A--IAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAK 826 (1036)
T ss_pred HHCCEEEeCCHHHHHHHHhc-----c------C--cccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhH
Confidence 88999999999887765431 0 0 01134578999999999988764210 0 0 0 1123
Q ss_pred HHHHHHhc----CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHh
Q 003029 354 KELQETFA----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 429 (856)
Q Consensus 354 ~~lr~~~~----~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~I 429 (856)
..++++++ +.++|++||||.+.||++.+++|+..+++. + +.|+++|.+ |+ ..++.++++++.++
T Consensus 827 ~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~G-----pd-~~~e~~l~~La~~L 894 (1036)
T PLN02316 827 EALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGSA-----PD-PRIQNDFVNLANQL 894 (1036)
T ss_pred HHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeCC-----CC-HHHHHHHHHHHHHh
Confidence 34666663 568999999999999999999999998763 2 457777642 22 23456777777766
Q ss_pred hcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--c----
Q 003029 430 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G---- 503 (856)
Q Consensus 430 N~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g---- 503 (856)
+..+.. .|.| .+..+......+|++||+||+||.+|||||+.+|||+|+ .|+|+|..+|..+.+ +
T Consensus 895 g~~~~~----rV~f-~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~G----tppVvs~vGGL~DtV~d~d~~~ 965 (1036)
T PLN02316 895 HSSHHD----RARL-CLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYG----SIPVVRKTGGLFDTVFDVDHDK 965 (1036)
T ss_pred CccCCC----eEEE-EecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcC----CCeEEEcCCCcHhhcccccccc
Confidence 543321 2554 445555444589999999999999999999999999994 799999999999987 2
Q ss_pred ---------CCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHhH
Q 003029 504 ---------AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDTV 563 (856)
Q Consensus 504 ---------~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~~ 563 (856)
.+|++|+|.|+++++.+|.++|....+.+..+....++.+ ..++|..=++.++.-+..+.
T Consensus 966 ~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 966 ERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred ccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 3699999999999999999999865433444344445554 56899998998888776653
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.5e-25 Score=253.79 Aligned_cols=312 Identities=15% Similarity=0.160 Sum_probs=201.2
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchh--hhh------------cCcccHH-
Q 003029 216 KANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSE--IHR------------TLPSRSD- 280 (856)
Q Consensus 216 ~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e--~fr------------~lp~~~~- 280 (856)
.+...+...+.+.....|+|++|+++..++..++++.. +.|+.++.|....... +.. .++.+-.
T Consensus 99 ~~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (439)
T TIGR02472 99 ELADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEA 177 (439)
T ss_pred HHHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcchHHHHHH
Confidence 33344444443333346999999988777777776544 5789999997532110 000 0011100
Q ss_pred HHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh
Q 003029 281 LLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF 360 (856)
Q Consensus 281 il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~ 360 (856)
....+..+|.|...+...+...+. ...+ -...++.++|+|||++.|.+....++.....+.+++..
T Consensus 178 ~~~~~~~ad~ii~~s~~~~~~~~~---~~~~-----------~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~ 243 (439)
T TIGR02472 178 EEETLAHASLVITSTHQEIEEQYA---LYDS-----------YQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFL 243 (439)
T ss_pred HHHHHHhCCEEEECCHHHHHHHHH---hccC-----------CCccceEEECCCcChhhcCCCCccccchhHHHHHHhhc
Confidence 112344677776665433222110 0001 12457899999999999976432221111111222211
Q ss_pred --cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHH----HHHHHHHHHHHHhhcccC
Q 003029 361 --AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQ----RLTSQVHEIVGRINGRFG 434 (856)
Q Consensus 361 --~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~----~l~~~l~~lv~~IN~~~g 434 (856)
+++++|++|||+++.||++.+|+||..+.+..+.. ++++ ++|.+. +.++++ ++.+++.+++.+++-
T Consensus 244 ~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~--~~~~l~~~~~~~~~~~~~~~~~~~l--- 315 (439)
T TIGR02472 244 KDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRD--DIRKMESQQREVLQKVLLLIDRYDL--- 315 (439)
T ss_pred cccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCcc--ccccccHHHHHHHHHHHHHHHHcCC---
Confidence 36789999999999999999999998643211111 2222 233211 111111 223334445444322
Q ss_pred CCCcccEEEeCCCCCHHHHHHHHHHc----cEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEE
Q 003029 435 TLTAVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAIL 508 (856)
Q Consensus 435 ~~~~~pV~~~~g~v~~~el~aly~~A----Dv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~l 508 (856)
.+ .|. |.|.++.+++.++|+.| |+||+||.+||||++++|||||+ .|+|+|+.+|..+.+ |.+|++
T Consensus 316 -~~--~V~-f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G----~PvV~s~~gg~~eiv~~~~~G~l 387 (439)
T TIGR02472 316 -YG--KVA-YPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACG----LPIVATDDGGPRDIIANCRNGLL 387 (439)
T ss_pred -Cc--eEE-ecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhC----CCEEEeCCCCcHHHhcCCCcEEE
Confidence 12 255 58999999999999988 99999999999999999999994 899999999999888 457999
Q ss_pred ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Q 003029 509 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 559 (856)
Q Consensus 509 VnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l 559 (856)
|+|.|++++|++|.++++++ +++.++.++.++++ +.++|..=++.+++-|
T Consensus 388 v~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 388 VDVLDLEAIASALEDALSDS-SQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred eCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999999999999999865 57788888888877 5688888887776644
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-24 Score=251.20 Aligned_cols=322 Identities=15% Similarity=0.196 Sum_probs=218.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhcC------CCCeEEEEEecCC-----CchhhhhcC
Q 003029 207 FQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN------SDMKVGWFLHTPF-----PSSEIHRTL 275 (856)
Q Consensus 207 ~~~~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~~~------~~~~i~~flH~Pf-----P~~e~fr~l 275 (856)
|.+....|.-.++..++.+...--..||||+||||..++|.++++.. .++|++++.|... |...+-..+
T Consensus 117 ~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 117 LKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred CCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 43445556556666666654432246999999999999999998653 4789999999852 211111112
Q ss_pred ccc------------HHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhh
Q 003029 276 PSR------------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRA 343 (856)
Q Consensus 276 p~~------------~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~ 343 (856)
|+. .-+-.++..||.|..-++.|++........-.|++ .+ ...+..++.+||||||++.|.+.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~----~~-l~~~~~kl~~I~NGID~~~~~p~ 271 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLD----KV-LEERKMRLHGILNGIDTRQWNPS 271 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChH----HH-HHhcCCCeeEEeCCccccccCCc
Confidence 311 12234577889888888877765332000000110 00 11135688999999999999864
Q ss_pred hcCCch------------HHHHHHHHHHhc-----CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEc
Q 003029 344 LEINPV------------QVHIKELQETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 406 (856)
Q Consensus 344 ~~~~~~------------~~~~~~lr~~~~-----~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~ 406 (856)
.. +.. .+....+++.++ +.++|++|||+.+.||++.+++|+.++.+. ++.|+++|.
T Consensus 272 ~d-~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~------~~~lvivG~ 344 (489)
T PRK14098 272 TD-KLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL------DIQLVICGS 344 (489)
T ss_pred cc-ccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc------CcEEEEEeC
Confidence 21 110 011233455442 567999999999999999999999998752 356888874
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCC
Q 003029 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 486 (856)
Q Consensus 407 p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~ 486 (856)
+ +. .+++++++++.+... .|.+ .+.++.+++..+|++||+||+||.+||||++.+|||+|+
T Consensus 345 G-----~~--~~~~~l~~l~~~~~~--------~V~~-~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G--- 405 (489)
T PRK14098 345 G-----DK--EYEKRFQDFAEEHPE--------QVSV-QTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYG--- 405 (489)
T ss_pred C-----CH--HHHHHHHHHHHHCCC--------CEEE-EEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCC---
Confidence 2 21 234566666655321 2554 677899999999999999999999999999999999994
Q ss_pred CceEEEeCCCCchhhc------cCCeEEECCCCHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 003029 487 KGVLILSEFAGAAQSL------GAGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFVSE 558 (856)
Q Consensus 487 ~g~lVlSe~aG~~~~l------g~~g~lVnP~d~~~lA~ai~~aL~~--~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~ 558 (856)
.|+|++..+|..+.+ +.+|++|+|.|++++|++|.+++.. .++.+.++.++. ....++|..=++.+++-
T Consensus 406 -~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~--~~~~fsw~~~a~~y~~l 482 (489)
T PRK14098 406 -TIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA--MERDFSWKNSAEEYAQL 482 (489)
T ss_pred -CCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH--hcCCCChHHHHHHHHHH
Confidence 789999999998776 3479999999999999999998742 233333333322 23678888888888776
Q ss_pred HHHh
Q 003029 559 LNDT 562 (856)
Q Consensus 559 l~~~ 562 (856)
++++
T Consensus 483 Y~~~ 486 (489)
T PRK14098 483 YREL 486 (489)
T ss_pred HHHH
Confidence 6654
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-24 Score=251.65 Aligned_cols=310 Identities=22% Similarity=0.264 Sum_probs=212.8
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhcCC--CCeEEEEEecCCC----chhhhhc--Cccc---------
Q 003029 216 KANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNS--DMKVGWFLHTPFP----SSEIHRT--LPSR--------- 278 (856)
Q Consensus 216 ~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~~~~--~~~i~~flH~PfP----~~e~fr~--lp~~--------- 278 (856)
..++..++.+...-...|+||+||+|..++|.+++.... ++|+.++.|...+ +.+.+.. +|+.
T Consensus 113 ~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 192 (473)
T TIGR02095 113 FFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEF 192 (473)
T ss_pred HHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhc
Confidence 344444444443333579999999999999999987754 3899999998642 1222221 1210
Q ss_pred ----HHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCcee--eCCeeEEEEEeecccChhhhhhhhcCC-----
Q 003029 279 ----SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRALEIN----- 347 (856)
Q Consensus 279 ----~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~--~~g~~~~v~viP~GID~~~f~~~~~~~----- 347 (856)
.-+..++..||.|...++.+++..... ..| .++. +..+..++.+||||||.+.|.+.....
T Consensus 193 ~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~-----~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~ 264 (473)
T TIGR02095 193 YGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFG-----YGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANY 264 (473)
T ss_pred CCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCC-----ccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCc
Confidence 012235667788777777666554321 000 0010 011345789999999999987642100
Q ss_pred -----c-hHHHHHHHHHHhc-----CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHH
Q 003029 348 -----P-VQVHIKELQETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQ 416 (856)
Q Consensus 348 -----~-~~~~~~~lr~~~~-----~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~ 416 (856)
+ -......++++++ ++++|++|||+.+.||++.+++|++++.++. +.|+++|.+. +
T Consensus 265 ~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g~----~--- 331 (473)
T TIGR02095 265 SADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTGD----P--- 331 (473)
T ss_pred CccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCCC----H---
Confidence 0 0112334666653 6789999999999999999999999987542 5688776421 2
Q ss_pred HHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCC
Q 003029 417 RLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA 496 (856)
Q Consensus 417 ~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~a 496 (856)
.+++++++++.+.+. .+.+ .+..+.+++..+|++||++++||.+||||++.+|||+|+ .|+|+|..+
T Consensus 332 ~~~~~l~~~~~~~~~--------~v~~-~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G----~pvI~s~~g 398 (473)
T TIGR02095 332 ELEEALRELAERYPG--------NVRV-IIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYG----TVPIVRRTG 398 (473)
T ss_pred HHHHHHHHHHHHCCC--------cEEE-EEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCC----CCeEEccCC
Confidence 244566666544221 2554 455688889999999999999999999999999999994 899999999
Q ss_pred Cchhhc--c------CCeEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 003029 497 GAAQSL--G------AGAILVNPWNITEVANAIARALNM---SPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (856)
Q Consensus 497 G~~~~l--g------~~g~lVnP~d~~~lA~ai~~aL~~---~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 561 (856)
|..+.+ + .+|++++|.|++++|++|.++|.+ .++.+.++.++.. .+.++|..-++.+++-+++
T Consensus 399 g~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 399 GLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYRS 472 (473)
T ss_pred CccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHHh
Confidence 999988 4 679999999999999999999873 3345555544443 2578888888888776653
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.6e-24 Score=243.57 Aligned_cols=277 Identities=17% Similarity=0.126 Sum_probs=203.2
Q ss_pred CCCEEEEeCccchhHHHHHHhc-CCCCeEEEEEecCCCch-hhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPSS-EIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTR 308 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~-~~~~~i~~flH~PfP~~-e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (856)
+.|+|++|..+.-.+..++++. ....++.+++|.+-... .+.. ..+..+-+.+-.+|.|...+....+.+..
T Consensus 118 ~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~---- 191 (406)
T PRK15427 118 VADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK---- 191 (406)
T ss_pred CCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH----
Confidence 4699999988776667777663 22445677888652211 1110 01112233345789988877654443321
Q ss_pred HhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHH
Q 003029 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (856)
Q Consensus 309 ~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~ 388 (856)
+|. ...++.++|+|||++.|.+.... ...+...|++|||+.+.||++.+|+|++.+
T Consensus 192 -~g~-----------~~~ki~vi~nGvd~~~f~~~~~~------------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l 247 (406)
T PRK15427 192 -MGC-----------PPEKIAVSRMGVDMTRFSPRPVK------------APATPLEIISVARLTEKKGLHVAIEACRQL 247 (406)
T ss_pred -cCC-----------CHHHEEEcCCCCCHHHcCCCccc------------cCCCCeEEEEEeCcchhcCHHHHHHHHHHH
Confidence 121 23578899999999988643110 113456799999999999999999999999
Q ss_pred HHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 003029 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (856)
Q Consensus 389 l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~ 468 (856)
.+++|++ .|+++|. ++.. +++++++.+.+. .+.+.|.|.++++++..+|+.||+||+||.
T Consensus 248 ~~~~~~~----~l~ivG~-----G~~~----~~l~~~~~~~~l-------~~~V~~~G~~~~~el~~~l~~aDv~v~pS~ 307 (406)
T PRK15427 248 KEQGVAF----RYRILGI-----GPWE----RRLRTLIEQYQL-------EDVVEMPGFKPSHEVKAMLDDADVFLLPSV 307 (406)
T ss_pred HhhCCCE----EEEEEEC-----chhH----HHHHHHHHHcCC-------CCeEEEeCCCCHHHHHHHHHhCCEEEECCc
Confidence 8877764 4877763 3433 344445444322 133446899999999999999999999998
Q ss_pred C------cCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 003029 469 R------DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (856)
Q Consensus 469 ~------EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~ 540 (856)
. ||||++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++++++++++.++.++++
T Consensus 308 ~~~~g~~Eg~p~~llEAma~G----~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar 383 (406)
T PRK15427 308 TGADGDMEGIPVALMEAMAVG----IPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAR 383 (406)
T ss_pred cCCCCCccCccHHHHHHHhCC----CCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4 99999999999994 899999999999988 56899999999999999999999967778888899998
Q ss_pred HHH-HhcCHHHHHHHHHHHHHH
Q 003029 541 THV-TTHTAQEWAETFVSELND 561 (856)
Q Consensus 541 ~~v-~~~~~~~W~~~fl~~l~~ 561 (856)
+++ ..+++...++.+.+-+++
T Consensus 384 ~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 384 EKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHhcCHHHHHHHHHHHHhh
Confidence 887 668999988888776653
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.3e-24 Score=246.55 Aligned_cols=296 Identities=21% Similarity=0.236 Sum_probs=199.6
Q ss_pred CCCEEEEeCccchhHHHHHHhc-CCCCeEEEEEecC-----CCchhhhh--cCccc-------------HHHHHHhhcCC
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTP-----FPSSEIHR--TLPSR-------------SDLLRAVLAAD 289 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~-~~~~~i~~flH~P-----fP~~e~fr--~lp~~-------------~~il~~ll~aD 289 (856)
..||||+||||..++|.+++.. ..+++++++.|.. ||. ..+. .+|+. .-+-.++..||
T Consensus 133 ~pDIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad 211 (485)
T PRK14099 133 VPDIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLAD 211 (485)
T ss_pred CCCEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcC
Confidence 4699999999999999998743 3567899999974 221 1111 11110 01334466778
Q ss_pred EEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCC-----ch------HHHHHHHHH
Q 003029 290 LVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEIN-----PV------QVHIKELQE 358 (856)
Q Consensus 290 lIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~-----~~------~~~~~~lr~ 358 (856)
.|.-.++.+++.....- .-.|++ + .+..+..++.+||||||++.|.+..... .. ......+++
T Consensus 212 ~vitVS~~~a~ei~~~~-~g~gl~----~-~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~ 285 (485)
T PRK14099 212 RITTVSPTYALEIQGPE-AGMGLD----G-LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQA 285 (485)
T ss_pred eeeecChhHHHHHhccc-CCcChH----H-HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHH
Confidence 87777776665432100 000000 0 0111345789999999999997643210 00 011234566
Q ss_pred Hhc-----CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhccc
Q 003029 359 TFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF 433 (856)
Q Consensus 359 ~~~-----~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~ 433 (856)
+++ +.++|++||||.+.||++.+++|+..+++. ++.|+++|.+ + + .+++++++++.+...
T Consensus 286 ~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~------~~~lvivG~G---~-~---~~~~~l~~l~~~~~~-- 350 (485)
T PRK14099 286 RFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE------GAQLALLGSG---D-A---ELEARFRAAAQAYPG-- 350 (485)
T ss_pred HcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc------CcEEEEEecC---C-H---HHHHHHHHHHHHCCC--
Confidence 552 356888999999999999999999998753 2457777642 1 2 244556666544221
Q ss_pred CCCCcccEEEeCCCCCHHHHHHHH-HHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--c-------
Q 003029 434 GTLTAVPIHHLDRSLDFPALCALY-AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G------- 503 (856)
Q Consensus 434 g~~~~~pV~~~~g~v~~~el~aly-~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g------- 503 (856)
.+.++.|. .+++..+| +.||+||+||.+||||++.+|||+|+ .|+|+|..+|..+.+ +
T Consensus 351 ------~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G----~ppVvs~~GGl~d~V~~~~~~~~~~ 418 (485)
T PRK14099 351 ------QIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYG----AVPVVARVGGLADTVVDANEMAIAT 418 (485)
T ss_pred ------CEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCC----CCcEEeCCCCccceeeccccccccc
Confidence 24445675 57888887 56999999999999999999999994 688999999998877 2
Q ss_pred --CCeEEECCCCHHHHHHHHHHH---HcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhH
Q 003029 504 --AGAILVNPWNITEVANAIARA---LNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563 (856)
Q Consensus 504 --~~g~lVnP~d~~~lA~ai~~a---L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 563 (856)
.+|++|+|.|++++|++|.++ +++ ++.+.++.++.+ ...++|..=++++++-++++.
T Consensus 419 ~~~~G~l~~~~d~~~La~ai~~a~~l~~d-~~~~~~l~~~~~--~~~fSw~~~a~~y~~lY~~l~ 480 (485)
T PRK14099 419 GVATGVQFSPVTADALAAALRKTAALFAD-PVAWRRLQRNGM--TTDVSWRNPAQHYAALYRSLV 480 (485)
T ss_pred CCCceEEeCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHhh--hhcCChHHHHHHHHHHHHHHH
Confidence 369999999999999999984 443 445555555544 467888888888887776654
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-23 Score=236.27 Aligned_cols=289 Identities=19% Similarity=0.193 Sum_probs=212.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhh---cCcc--cHHHHH--HhhcCCEEEEeCHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR---TLPS--RSDLLR--AVLAADLVGFHTYDYARHFV 303 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr---~lp~--~~~il~--~ll~aDlIgf~t~~~~~~Fl 303 (856)
..|+|++|++....++.++++. .+.|+.+++|..++-...+. ..+. ...+++ .+..+|.|.+.+....+.+.
T Consensus 101 ~~Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~ 179 (405)
T TIGR03449 101 YYDLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLV 179 (405)
T ss_pred CCCeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHH
Confidence 5799999987666566665543 46789999997542111110 0111 122222 34578999999987777664
Q ss_pred HHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHH
Q 003029 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQ 380 (856)
Q Consensus 304 ~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~ 380 (856)
. ..+. ...++.++|+|||.+.|.+.. ....++++ .++++|+++||+.+.||+..
T Consensus 180 ~----~~~~-----------~~~ki~vi~ngvd~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~l~~~K~~~~ 236 (405)
T TIGR03449 180 R----HYDA-----------DPDRIDVVAPGADLERFRPGD--------RATERARLGLPLDTKVVAFVGRIQPLKAPDV 236 (405)
T ss_pred H----HcCC-----------ChhhEEEECCCcCHHHcCCCc--------HHHHHHhcCCCCCCcEEEEecCCCcccCHHH
Confidence 3 1121 235788999999998886431 11233444 36789999999999999999
Q ss_pred HHHHHHHHHHhCcCccCceEEEEEEcCCCCCh-HHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 003029 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV-PEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (856)
Q Consensus 381 ~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~-~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ 459 (856)
+++|++.+++++|+. ++.|+++|.+.. ++ +... ++++++.+.+.. ..|. |.|.++.+++..+|+.
T Consensus 237 li~a~~~l~~~~~~~--~~~l~ivG~~~~-~g~~~~~----~l~~~~~~~~l~------~~v~-~~g~~~~~~~~~~l~~ 302 (405)
T TIGR03449 237 LLRAVAELLDRDPDR--NLRVIVVGGPSG-SGLATPD----ALIELAAELGIA------DRVR-FLPPRPPEELVHVYRA 302 (405)
T ss_pred HHHHHHHHHhhCCCc--ceEEEEEeCCCC-CcchHHH----HHHHHHHHcCCC------ceEE-ECCCCCHHHHHHHHHh
Confidence 999999999988873 477888886542 23 3333 344444443321 1255 5899999999999999
Q ss_pred ccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHH
Q 003029 460 TDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (856)
Q Consensus 460 ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~ 537 (856)
||++++||..||||++++|||||+ .|+|+|..+|..+.+ +.+|++++|.|++++|++|.++++++ +.+.++..
T Consensus 303 ad~~v~ps~~E~~g~~~lEAma~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~-~~~~~~~~ 377 (405)
T TIGR03449 303 ADVVAVPSYNESFGLVAMEAQACG----TPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDP-RTRIRMGA 377 (405)
T ss_pred CCEEEECCCCCCcChHHHHHHHcC----CCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCH-HHHHHHHH
Confidence 999999999999999999999994 899999999988877 56799999999999999999999854 46677777
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHh
Q 003029 538 HNFTHVTTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 538 ~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (856)
++++.++.++|..-++.+++-+.++
T Consensus 378 ~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 378 AAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 8888888899999999888777654
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.6e-24 Score=240.38 Aligned_cols=284 Identities=17% Similarity=0.186 Sum_probs=197.3
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCc--hhh-hh-cCccc--------HH---HHHHhhcCCEEEEeC
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS--SEI-HR-TLPSR--------SD---LLRAVLAADLVGFHT 295 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~--~e~-fr-~lp~~--------~~---il~~ll~aDlIgf~t 295 (856)
..|+|+.| +.+....++++..|++++..++|..+-. .+. |. ..+.+ .. ....+..+|.|...+
T Consensus 87 ~pdvi~~h--~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s 164 (396)
T cd03818 87 RPDVIVAH--PGWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADAGVSPT 164 (396)
T ss_pred CCCEEEEC--CccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEEECCC
Confidence 35999999 4556667789989999988777643311 110 10 11111 11 224566788887766
Q ss_pred HHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeec-
Q 003029 296 YDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDR- 371 (856)
Q Consensus 296 ~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~R- 371 (856)
......|.. . + ..++.++|+|||.+.|.+.... ...++... .++++|+++||
T Consensus 165 ~~~~~~~~~----~-----------~---~~ki~vI~ngvd~~~f~~~~~~------~~~~~~~~~~~~~~~~i~~vgR~ 220 (396)
T cd03818 165 RWQRSTFPA----E-----------L---RSRISVIHDGIDTDRLRPDPQA------RLRLPNGRVLTPGDEVITFVARN 220 (396)
T ss_pred HHHHhhCcH----h-----------h---ccceEEeCCCccccccCCCchh------hhcccccccCCCCCeEEEEECCC
Confidence 543333221 0 1 1478899999999988754211 11111111 36788999998
Q ss_pred ccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHH---HHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCC
Q 003029 372 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPE---YQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448 (856)
Q Consensus 372 ld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~---~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v 448 (856)
+.+.||++.+|+|+..+.+++|+++ |+++|......+.. -..++++ ++.+++.+.+ ...|+ |.|.+
T Consensus 221 l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~---~~~V~-f~G~v 289 (396)
T cd03818 221 LEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQH---MLDELGGRLD---LSRVH-FLGRV 289 (396)
T ss_pred cccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHHH---HHHHhhcccC---cceEE-EeCCC
Confidence 9999999999999999998888754 88887532110000 0011111 2222222111 12355 58999
Q ss_pred CHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHc
Q 003029 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN 526 (856)
Q Consensus 449 ~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~ 526 (856)
+.+++.++|+.||++++||..||+|++++|||||+ .|+|+|+.+|..+.+ |.+|++|+|.|++++|++|.++++
T Consensus 290 ~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G----~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~ 365 (396)
T cd03818 290 PYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACG----CLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLD 365 (396)
T ss_pred CHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCC----CCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999994 899999999998888 468999999999999999999998
Q ss_pred CCHHHHHHHHHHHHHHHHh-cCHHHHHHHHH
Q 003029 527 MSPEEREKRHWHNFTHVTT-HTAQEWAETFV 556 (856)
Q Consensus 527 ~~~~er~~r~~~~~~~v~~-~~~~~W~~~fl 556 (856)
++ +++.++.+++++++.+ +++..-++.++
T Consensus 366 ~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 366 DP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 75 5788888889999876 77776666654
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-22 Score=242.49 Aligned_cols=331 Identities=14% Similarity=0.152 Sum_probs=212.8
Q ss_pred HHHHHHHHHHHHHHHHHhc-CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCC----chh-hhhcCc------cc
Q 003029 211 FAAYIKANQMFADVVNKHY-KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP----SSE-IHRTLP------SR 278 (856)
Q Consensus 211 w~~Y~~vN~~fa~~i~~~~-~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP----~~e-~fr~lp------~~ 278 (856)
|..-..+....++.+.... ...|+|+.|.+.--+++..++++. +++..++.|..-. ... .+.... .+
T Consensus 364 ~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r 442 (784)
T TIGR02470 364 WPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQ 442 (784)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHhhhh
Confidence 5555555555555554333 246999999988878888887765 6787777785411 000 000010 00
Q ss_pred -HHHHHHhhcCCEEEEeCHHHHHHHHHHHH-----HHhCccc---CCCceeeCCeeEEEEEeecccChhhhhhhhcCCch
Q 003029 279 -SDLLRAVLAADLVGFHTYDYARHFVSACT-----RILGFEG---TPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPV 349 (856)
Q Consensus 279 -~~il~~ll~aDlIgf~t~~~~~~Fl~~~~-----~~lg~~~---~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~ 349 (856)
..-+..|-.||.|.-.|+.....-...+. ..++... .-+++.. ...|+.++|+|+|++.|.+......-
T Consensus 443 ~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~--~~~Ki~VVpPGVD~~iF~P~~~~~~r 520 (784)
T TIGR02470 443 FTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDV--FDPKFNIVSPGADESIYFPYSDKEKR 520 (784)
T ss_pred hhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccC--CcCCeEEECCCcChhhcCCCCchhhh
Confidence 00124577899999888754321111111 0001000 0011111 23488999999999999764321100
Q ss_pred -HHHH----------HHHHHHh-----cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCC---
Q 003029 350 -QVHI----------KELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT--- 410 (856)
Q Consensus 350 -~~~~----------~~lr~~~-----~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~--- 410 (856)
.... ...++.+ .++++|++|||+++.||+..+++||.++.+.. ..+.|++||++...
T Consensus 521 ~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~----~~~~LVIVGGg~~~~~s 596 (784)
T TIGR02470 521 LTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLR----ELVNLVVVAGKLDAKES 596 (784)
T ss_pred hhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhC----CCeEEEEEeCCcccccc
Confidence 0000 0112222 36789999999999999999999998764332 34668888864321
Q ss_pred ChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCC-CCHHHHHHHHH----HccEEEECCCCcCCChhHHHHHhhcCC
Q 003029 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS-LDFPALCALYA----VTDVALVTSLRDGMNLVSYEFVACQDL 485 (856)
Q Consensus 411 ~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~-v~~~el~aly~----~ADv~v~~S~~EG~~Lv~lEama~~~~ 485 (856)
...+.....+++.+++.+.+- .+ .|.| .|. .+..++..+|+ .+||||+||.+||||||++|||||
T Consensus 597 ~d~ee~~~i~~L~~la~~~gL----~g--~V~f-lG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAc--- 666 (784)
T TIGR02470 597 KDREEQAEIEKMHNLIDQYQL----HG--QIRW-IGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTC--- 666 (784)
T ss_pred cchhHHHHHHHHHHHHHHhCC----CC--eEEE-ccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHc---
Confidence 111222334556666665432 12 3665 564 36666777776 247999999999999999999999
Q ss_pred CCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Q 003029 486 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 559 (856)
Q Consensus 486 ~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~---~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l 559 (856)
|.|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++++ ..++.+.++..+++++| +.++|...++++++..
T Consensus 667 -GlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 667 -GLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred -CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4999999999999988 678999999999999999999874 34557777778888887 6789999998887655
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.4e-23 Score=239.38 Aligned_cols=312 Identities=22% Similarity=0.256 Sum_probs=211.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhcC-----CCCeEEEEEecCCCch----hhhhc--Ccc---
Q 003029 212 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN-----SDMKVGWFLHTPFPSS----EIHRT--LPS--- 277 (856)
Q Consensus 212 ~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~~~-----~~~~i~~flH~PfP~~----e~fr~--lp~--- 277 (856)
..|...++...+.+.+.-...|+||+||+|..++|.+++... .+.++.|+.|.+.+.. ..+.. +++
T Consensus 110 ~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~ 189 (476)
T cd03791 110 ERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEEL 189 (476)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccch
Confidence 344444555555554443467999999999999999998763 5789999999874321 11111 111
Q ss_pred ----------c-HHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCcee--eCCeeEEEEEeecccChhhhhhhh
Q 003029 278 ----------R-SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRAL 344 (856)
Q Consensus 278 ----------~-~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~--~~g~~~~v~viP~GID~~~f~~~~ 344 (856)
. .-+..++..||.|...++.+++...+. .. ..++. ...+..++.+||||||.+.|.+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~-------~~-~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~ 261 (476)
T cd03791 190 FHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTP-------EF-GEGLDGLLRARAGKLSGILNGIDYDVWNPAT 261 (476)
T ss_pred hhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCC-------CC-CcchHHHHHhccCCeEEEeCCCcCcccCccc
Confidence 0 122334667788777777666554320 00 00110 112346899999999999887643
Q ss_pred cCC-----------chHHHHHHHHHHh-----cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCC
Q 003029 345 EIN-----------PVQVHIKELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT 408 (856)
Q Consensus 345 ~~~-----------~~~~~~~~lr~~~-----~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~ 408 (856)
... .-......+++++ .++++|+++||+.+.||++.+++|++.+.++. +.|+++|.+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g- 334 (476)
T cd03791 262 DPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVILGSG- 334 (476)
T ss_pred cchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEEEecC-
Confidence 211 0011223456655 36789999999999999999999999987642 557777642
Q ss_pred CCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCc
Q 003029 409 RTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKG 488 (856)
Q Consensus 409 r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g 488 (856)
+ + .+.+.+++++.+.. ..++++.+ .+.+++..+|+.||++++||.+||||++.+|||+|+ .
T Consensus 335 --~-~---~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G----~ 395 (476)
T cd03791 335 --D-P---EYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYG----T 395 (476)
T ss_pred --C-H---HHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCC----C
Confidence 1 2 23455555554421 13665554 457888899999999999999999999999999994 8
Q ss_pred eEEEeCCCCchhhc--cC------CeEEECCCCHHHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 003029 489 VLILSEFAGAAQSL--GA------GAILVNPWNITEVANAIARALNMS--PEEREKRHWHNFTHVTTHTAQEWAETFVSE 558 (856)
Q Consensus 489 ~lVlSe~aG~~~~l--g~------~g~lVnP~d~~~lA~ai~~aL~~~--~~er~~r~~~~~~~v~~~~~~~W~~~fl~~ 558 (856)
|+|+|..+|..+.+ +. +|++|+|.|+++++++|.+++++. ++++.++.++.++ ..++|..-++++++.
T Consensus 396 pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~ 473 (476)
T cd03791 396 VPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLEL 473 (476)
T ss_pred CCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHHH
Confidence 99999999999988 34 799999999999999999998643 3344444444332 357777777777665
Q ss_pred H
Q 003029 559 L 559 (856)
Q Consensus 559 l 559 (856)
+
T Consensus 474 y 474 (476)
T cd03791 474 Y 474 (476)
T ss_pred H
Confidence 4
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-22 Score=235.82 Aligned_cols=278 Identities=18% Similarity=0.218 Sum_probs=199.8
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCccc-H---HHHHH-hhcCCEEEEeCHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-S---DLLRA-VLAADLVGFHTYDYARHFVSA 305 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~-~---~il~~-ll~aDlIgf~t~~~~~~Fl~~ 305 (856)
+.|+||+|+...+.++.++-.+..++|+.+.+|.-+|.........+. + .+.+. ...+|.|...+....+.+..
T Consensus 144 kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~- 222 (465)
T PLN02871 144 KPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGKELEA- 222 (465)
T ss_pred CCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHH-
Confidence 469999998766555544433344688888888755432110011110 0 11122 23578888887766655532
Q ss_pred HHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh----cCCceEEEeecccccCChHHH
Q 003029 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF----AGRKVMLGVDRLDMIKGIPQK 381 (856)
Q Consensus 306 ~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~----~~~~iIl~V~Rld~~KGi~~~ 381 (856)
.+. ....++.++|+|||.+.|.+.... ..++.++ +++++|+++||+.+.||++.+
T Consensus 223 ----~~~----------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~l 281 (465)
T PLN02871 223 ----AGV----------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVGRLGAEKNLDFL 281 (465)
T ss_pred ----cCC----------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeCCCchhhhHHHH
Confidence 111 013478899999999988754221 1223333 367899999999999999999
Q ss_pred HHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 003029 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (856)
Q Consensus 382 L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~AD 461 (856)
++|++++ |+ +.|+++| +++.. +++++++.. .+|+| .|.++.+++..+|+.||
T Consensus 282 i~a~~~~----~~----~~l~ivG-----~G~~~----~~l~~~~~~----------~~V~f-~G~v~~~ev~~~~~~aD 333 (465)
T PLN02871 282 KRVMERL----PG----ARLAFVG-----DGPYR----EELEKMFAG----------TPTVF-TGMLQGDELSQAYASGD 333 (465)
T ss_pred HHHHHhC----CC----cEEEEEe-----CChHH----HHHHHHhcc----------CCeEE-eccCCHHHHHHHHHHCC
Confidence 9988754 54 4588776 33433 344444332 13664 89999999999999999
Q ss_pred EEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc-----cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHH
Q 003029 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVANAIARALNMSPEEREKRH 536 (856)
Q Consensus 462 v~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l-----g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~ 536 (856)
+||+||..||||++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|++++|++|.+++++ ++.+.++.
T Consensus 334 v~V~pS~~E~~g~~vlEAmA~G----~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~ 408 (465)
T PLN02871 334 VFVMPSESETLGFVVLEAMASG----VPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLAD-PELRERMG 408 (465)
T ss_pred EEEECCcccccCcHHHHHHHcC----CCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHH
Confidence 9999999999999999999994 899999999998877 3579999999999999999999985 45777888
Q ss_pred HHHHHHHHhcCHHHHHHHHHHH-HHHhH
Q 003029 537 WHNFTHVTTHTAQEWAETFVSE-LNDTV 563 (856)
Q Consensus 537 ~~~~~~v~~~~~~~W~~~fl~~-l~~~~ 563 (856)
+++++++++++|...++.++.. ...+.
T Consensus 409 ~~a~~~~~~fsw~~~a~~l~~~~Y~~~~ 436 (465)
T PLN02871 409 AAAREEVEKWDWRAATRKLRNEQYSAAI 436 (465)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 8889999999999999999874 55543
|
|
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-22 Score=239.96 Aligned_cols=330 Identities=15% Similarity=0.118 Sum_probs=208.6
Q ss_pred HHHHHHHHHHHHHHHHHhc-CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCC-----------Cchh-hhhcC-c
Q 003029 211 FAAYIKANQMFADVVNKHY-KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPF-----------PSSE-IHRTL-P 276 (856)
Q Consensus 211 w~~Y~~vN~~fa~~i~~~~-~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~Pf-----------P~~e-~fr~l-p 276 (856)
|..-..++...++.+.... ..+|+|+.|++.--+++..++++. ++|.+++.|.-- ...+ -++.. .
T Consensus 387 ~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r 465 (815)
T PLN00142 387 WPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQ 465 (815)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhhhhc
Confidence 5555555555655554333 246999999877778888887765 688888888421 1000 11100 0
Q ss_pred ccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCc--ccC-C------CceeeCCeeEEEEEeecccChhhhhhhhcCC
Q 003029 277 SRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGF--EGT-P------EGVEDQGRLTRVAAFPIGIDSERFIRALEIN 347 (856)
Q Consensus 277 ~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~--~~~-~------~~v~~~g~~~~v~viP~GID~~~f~~~~~~~ 347 (856)
...+ ...|..||.|...|+......-..+.. ++. ..+ + +++... ..++.++|+|+|...|.+.....
T Consensus 466 ~~aE-~~a~~~Ad~IIasT~qEi~g~~~~i~q-y~sh~~f~~p~L~rvv~GId~~--~~ki~VVppGvD~~~F~P~~~~~ 541 (815)
T PLN00142 466 FTAD-LIAMNHADFIITSTYQEIAGSKDTVGQ-YESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMSIYFPYTEKQ 541 (815)
T ss_pred hHHH-HHHHHhhhHHHhCcHHHHhcccchhhh-hhcccccccchhhhhhcccccc--ccCeeEECCCCChhhcCCCChHH
Confidence 0011 224556777765554433211000000 000 000 0 111111 22788999999999887532110
Q ss_pred --------chHHHH---HHHHHHh-----cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCC-CC
Q 003029 348 --------PVQVHI---KELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT-RT 410 (856)
Q Consensus 348 --------~~~~~~---~~lr~~~-----~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~-r~ 410 (856)
.+.+.. ...++.+ .++++|++|||+++.||+..+|+||.++.+..++ +.|++||++. ..
T Consensus 542 ~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~----~~LVIVGgg~d~~ 617 (815)
T PLN00142 542 KRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLREL----VNLVVVGGFIDPS 617 (815)
T ss_pred hhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCC----cEEEEEECCcccc
Confidence 000000 0011112 3567999999999999999999999988665544 5688888641 11
Q ss_pred C--hHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeC---CCCCHHHHHHHHH-HccEEEECCCCcCCChhHHHHHhhcC
Q 003029 411 D--VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFPALCALYA-VTDVALVTSLRDGMNLVSYEFVACQD 484 (856)
Q Consensus 411 ~--~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~---g~v~~~el~aly~-~ADv~v~~S~~EG~~Lv~lEama~~~ 484 (856)
. ..+..+..+++.+++.+.+-. + .|.|+. +.++.++++.+|+ ++|+||+||.+||||++++|||||
T Consensus 618 ~s~d~ee~~el~~L~~La~~lgL~----~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~-- 689 (815)
T PLN00142 618 KSKDREEIAEIKKMHSLIEKYNLK----G--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTC-- 689 (815)
T ss_pred ccccHHHHHHHHHHHHHHHHcCCC----C--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHc--
Confidence 1 111112224455666554321 1 255432 2455678888777 579999999999999999999999
Q ss_pred CCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHH
Q 003029 485 LKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHV-TTHTAQEWAETFVSE 558 (856)
Q Consensus 485 ~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~---~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~ 558 (856)
|.|+|+|+.+|..+.+ |.+|++|+|.|++++|++|.+++. .+++.+.++.+++++++ +.++|...++++++-
T Consensus 690 --GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L 767 (815)
T PLN00142 690 --GLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTL 767 (815)
T ss_pred --CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 4899999999999988 678999999999999999987653 35667788888888887 679999999888774
Q ss_pred H
Q 003029 559 L 559 (856)
Q Consensus 559 l 559 (856)
.
T Consensus 768 ~ 768 (815)
T PLN00142 768 G 768 (815)
T ss_pred H
Confidence 4
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.6e-22 Score=227.28 Aligned_cols=297 Identities=14% Similarity=0.119 Sum_probs=205.1
Q ss_pred CCCEEEEeCccchhH-HHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHH-hhcCCEEEEeCHHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFL-PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFVSACTR 308 (856)
Q Consensus 231 ~~DvIwvHDyhl~ll-p~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~-ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (856)
..|+|++|+++.... ...+..+..+.|+++..|..|+..+... .+...+.+. +-.+|.|.+.+....+.+...
T Consensus 88 ~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~--~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--- 162 (398)
T cd03796 88 RITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASS--IHTNKLLRFSLADVDHVICVSHTSKENTVLR--- 162 (398)
T ss_pred CCCEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhh--HHhhHHHHHhhccCCEEEEecHhHhhHHHHH---
Confidence 469999999775433 2333334456889999998765322111 011122222 446888888887655543221
Q ss_pred HhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHH
Q 003029 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (856)
Q Consensus 309 ~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~ 388 (856)
.+ ....++.++|+|+|.+.|.+.... ...++++|+++||+.+.||+..+++|+..+
T Consensus 163 -~~-----------~~~~k~~vi~ngvd~~~f~~~~~~------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 163 -AS-----------LDPERVSVIPNAVDSSDFTPDPSK------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred -hC-----------CChhhEEEEcCccCHHHcCCCccc------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 01 124578899999999988653210 124678999999999999999999999999
Q ss_pred HHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 003029 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (856)
Q Consensus 389 l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~ 468 (856)
.+++|++ .|+++|. ++.... +++++.+.+. .+ .|.+ .|.++.+++..+|+.||++++||.
T Consensus 219 ~~~~~~~----~l~i~G~-----g~~~~~----l~~~~~~~~l----~~--~v~~-~G~~~~~~~~~~l~~ad~~v~pS~ 278 (398)
T cd03796 219 CKKHPNV----RFIIGGD-----GPKRIL----LEEMREKYNL----QD--RVEL-LGAVPHERVRDVLVQGHIFLNTSL 278 (398)
T ss_pred HhhCCCE----EEEEEeC-----CchHHH----HHHHHHHhCC----CC--eEEE-eCCCCHHHHHHHHHhCCEEEeCCh
Confidence 8888875 4777763 333333 3444443321 11 2554 799999999999999999999999
Q ss_pred CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhccCC-eEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHH-HHhc
Q 003029 469 RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAG-AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VTTH 546 (856)
Q Consensus 469 ~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~~-g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~-v~~~ 546 (856)
.||||++++|||||+ .|+|+|..+|..+.+.++ ++++ +.|+++++++|.+++.++. ++..+..+.++. .+.+
T Consensus 279 ~E~~g~~~~EAma~G----~PVI~s~~gg~~e~i~~~~~~~~-~~~~~~l~~~l~~~l~~~~-~~~~~~~~~~~~~~~~f 352 (398)
T cd03796 279 TEAFCIAIVEAASCG----LLVVSTRVGGIPEVLPPDMILLA-EPDVESIVRKLEEAISILR-TGKHDPWSFHNRVKKMY 352 (398)
T ss_pred hhccCHHHHHHHHcC----CCEEECCCCCchhheeCCceeec-CCCHHHHHHHHHHHHhChh-hhhhHHHHHHHHHHhhC
Confidence 999999999999994 899999999999988444 4445 4499999999999998765 333444555554 4778
Q ss_pred CHHHHHHHHHHHHHHhHHhhhhccccCCCCcchHHHHHHHHhcC
Q 003029 547 TAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSN 590 (856)
Q Consensus 547 ~~~~W~~~fl~~l~~~~~~~~~~~~~~~~~l~~~~~~~~y~~s~ 590 (856)
++..=++++++.+++.... + ...+ ...+...|....
T Consensus 353 s~~~~~~~~~~~y~~l~~~-~------~~~~-~~~~~~~~~~~~ 388 (398)
T cd03796 353 SWEDVAKRTEKVYDRILQT-P------NLSL-LERLKRYYSCGP 388 (398)
T ss_pred CHHHHHHHHHHHHHHHhcC-C------Ccch-HHhhhhhcccCc
Confidence 9998899988888775432 1 0122 556666666543
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.91 E-value=4e-22 Score=224.96 Aligned_cols=287 Identities=22% Similarity=0.214 Sum_probs=205.7
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhh-----hcCcccHHH-HHHhhcCCEEEEeCHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIH-----RTLPSRSDL-LRAVLAADLVGFHTYDYARHFVS 304 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f-----r~lp~~~~i-l~~ll~aDlIgf~t~~~~~~Fl~ 304 (856)
..|+||+|++...+.+.++++ ..+.|+.+.+|..+|..... ........+ ...+..+|.|...+....+.+..
T Consensus 83 ~~divh~~~~~~~~~~~~~~~-~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~ 161 (388)
T TIGR02149 83 DADVVHSHTWYTFLAGHLAKK-LYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILK 161 (388)
T ss_pred CCCeEeecchhhhhHHHHHHH-hcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHH
Confidence 479999999887766655543 45788999999865521110 000001111 22355789888888766555542
Q ss_pred HHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHHH
Q 003029 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 381 (856)
Q Consensus 305 ~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~~ 381 (856)
. .-+. ...++.++|+|+|++.|.+.. ...+++++ .++++|+++||+.+.||++.+
T Consensus 162 ~---~~~~-----------~~~~i~vi~ng~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~~~l 219 (388)
T TIGR02149 162 Y---YPDL-----------DPEKVHVIYNGIDTKEYKPDD--------GNVVLDRYGIDRSRPYILFVGRITRQKGVPHL 219 (388)
T ss_pred H---cCCC-----------CcceEEEecCCCChhhcCCCc--------hHHHHHHhCCCCCceEEEEEcccccccCHHHH
Confidence 1 0011 235788999999998876421 11233444 356799999999999999999
Q ss_pred HHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 003029 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (856)
Q Consensus 382 L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~AD 461 (856)
++|++++. ++ +.|+++|++. +.+ ++.+++++.+..++... ..|+++.+.++.+++..+|+.||
T Consensus 220 i~a~~~l~---~~----~~l~i~g~g~--~~~---~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~aD 282 (388)
T TIGR02149 220 LDAVHYIP---KD----VQVVLCAGAP--DTP---EVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLSNAE 282 (388)
T ss_pred HHHHHHHh---hc----CcEEEEeCCC--CcH---HHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHHhCC
Confidence 99999873 23 3466665322 112 33445555554443321 13777788999999999999999
Q ss_pred EEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCH------HHHHHHHHHHHcCCHHHHH
Q 003029 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI------TEVANAIARALNMSPEERE 533 (856)
Q Consensus 462 v~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~------~~lA~ai~~aL~~~~~er~ 533 (856)
++|+||..||||++++|||+|+ .|+|+|..+|..+.+ +.+|++++|.|+ ++++++|.++++. ++++.
T Consensus 283 v~v~ps~~e~~g~~~lEA~a~G----~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~-~~~~~ 357 (388)
T TIGR02149 283 VFVCPSIYEPLGIVNLEAMACG----TPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLAD-PELAK 357 (388)
T ss_pred EEEeCCccCCCChHHHHHHHcC----CCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhC-HHHHH
Confidence 9999999999999999999994 899999999999887 457999999998 9999999999985 45777
Q ss_pred HHHHHHHHHH-HhcCHHHHHHHHHHHHHHh
Q 003029 534 KRHWHNFTHV-TTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 534 ~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~ 562 (856)
++..++++.+ +.++|..+++++++.++++
T Consensus 358 ~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 358 KMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 7778888776 6799999999998877653
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.7e-22 Score=233.71 Aligned_cols=283 Identities=19% Similarity=0.159 Sum_probs=199.6
Q ss_pred HHHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCch---hhhhc---CcccHH--------HHH-HhhcC
Q 003029 224 VVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS---EIHRT---LPSRSD--------LLR-AVLAA 288 (856)
Q Consensus 224 ~i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~fr~---lp~~~~--------il~-~ll~a 288 (856)
.+...+.+.|+||+|......++..+..+..+.|+.++.|.-++.. +++.. .+..+. +.+ .+..|
T Consensus 166 ~l~~~~~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a 245 (475)
T cd03813 166 AIARPLPKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAA 245 (475)
T ss_pred HhccCCCCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhC
Confidence 3444556789999998665555555544556789999999765422 22211 001111 111 12356
Q ss_pred CEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEE
Q 003029 289 DLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLG 368 (856)
Q Consensus 289 DlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~ 368 (856)
|.|...+....+... . ++....++.++|||||.+.|.+.... ....+.++|++
T Consensus 246 d~Ii~~s~~~~~~~~-----~-----------~g~~~~ki~vIpNgid~~~f~~~~~~-----------~~~~~~~~i~~ 298 (475)
T cd03813 246 DRITTLYEGNRERQI-----E-----------DGADPEKIRVIPNGIDPERFAPARRA-----------RPEKEPPVVGL 298 (475)
T ss_pred CEEEecCHHHHHHHH-----H-----------cCCCHHHeEEeCCCcCHHHcCCcccc-----------ccCCCCcEEEE
Confidence 777665543322211 1 11234578899999999988753210 11246789999
Q ss_pred eecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCC
Q 003029 369 VDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448 (856)
Q Consensus 369 V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v 448 (856)
+||+.+.||+..+|+|+..+.++.|++ .|+++|... . .+ .+.+++++++.+++.. ..|.| .|
T Consensus 299 vGrl~~~Kg~~~li~a~~~l~~~~p~~----~l~IvG~g~-~-~~---~~~~e~~~li~~l~l~------~~V~f-~G-- 360 (475)
T cd03813 299 IGRVVPIKDIKTFIRAAAIVRKKIPDA----EGWVIGPTD-E-DP---EYAEECRELVESLGLE------DNVKF-TG-- 360 (475)
T ss_pred EeccccccCHHHHHHHHHHHHHhCCCe----EEEEECCCC-c-Ch---HHHHHHHHHHHHhCCC------CeEEE-cC--
Confidence 999999999999999999998888875 477776421 1 12 3455666676665432 13554 66
Q ss_pred CHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhccC--------CeEEECCCCHHHHHHH
Q 003029 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA--------GAILVNPWNITEVANA 520 (856)
Q Consensus 449 ~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~--------~g~lVnP~d~~~lA~a 520 (856)
.+++..+|+.||++|+||..||||++++|||||+ .|+|+|+.+|+.+.+.. +|++++|.|++++|++
T Consensus 361 -~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G----~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~a 435 (475)
T cd03813 361 -FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAG----IPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARA 435 (475)
T ss_pred -CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcC----CCEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHH
Confidence 5789999999999999999999999999999994 89999999999888743 7999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHHHh-cCHHHHHHHHHH
Q 003029 521 IARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVS 557 (856)
Q Consensus 521 i~~aL~~~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~ 557 (856)
|.+++++ ++.+.++.+++++++.+ +++...+++|.+
T Consensus 436 i~~ll~~-~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 436 ILRLLKD-PELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred HHHHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 9999986 45778888888888866 566777776655
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.3e-22 Score=222.17 Aligned_cols=295 Identities=21% Similarity=0.241 Sum_probs=207.6
Q ss_pred HHHHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhc-----Ccc-cHHH-HHHhhcCCEEEEeC
Q 003029 223 DVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRT-----LPS-RSDL-LRAVLAADLVGFHT 295 (856)
Q Consensus 223 ~~i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~-----lp~-~~~i-l~~ll~aDlIgf~t 295 (856)
..+.+.....|+|++|++....++..+.+. .+.++.+..|........... .+. +..+ ...+..+|.|.+.+
T Consensus 93 ~~~~~~~~~~Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s 171 (398)
T cd03800 93 RFLRREGGRPDLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIAST 171 (398)
T ss_pred HHHHhcCCCccEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcC
Confidence 334333336799999998777666666544 468888888875432110000 000 0111 22355789999888
Q ss_pred HHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeeccccc
Q 003029 296 YDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMI 375 (856)
Q Consensus 296 ~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~ 375 (856)
......+.. ..+ ....++.++|+|+|.+.|.+..... .....+. ...++++|+++||+++.
T Consensus 172 ~~~~~~~~~----~~~-----------~~~~~~~vi~ng~~~~~~~~~~~~~---~~~~~~~-~~~~~~~i~~~gr~~~~ 232 (398)
T cd03800 172 PQEAEELYS----LYG-----------AYPRRIRVVPPGVDLERFTPYGRAE---ARRARLL-RDPDKPRILAVGRLDPR 232 (398)
T ss_pred HHHHHHHHH----Hcc-----------ccccccEEECCCCCccceecccchh---hHHHhhc-cCCCCcEEEEEcccccc
Confidence 766555543 111 1233588999999998876532111 1111111 11467899999999999
Q ss_pred CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHH
Q 003029 376 KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCA 455 (856)
Q Consensus 376 KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~a 455 (856)
||+..+++|+..+.++.|++ .|+++|.......+ ....++++++.+.+.. ..+. +.|.++.+++..
T Consensus 233 k~~~~ll~a~~~l~~~~~~~----~l~i~G~~~~~~~~---~~~~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~ 298 (398)
T cd03800 233 KGIDTLIRAYAELPELRERA----NLVIVGGPRDDILA---MDEEELRELARELGVI------DRVD-FPGRVSREDLPA 298 (398)
T ss_pred cCHHHHHHHHHHHHHhCCCe----EEEEEECCCCcchh---hhhHHHHHHHHhcCCC------ceEE-EeccCCHHHHHH
Confidence 99999999999998877764 58888764422211 2223455555443321 1244 589999999999
Q ss_pred HHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHH
Q 003029 456 LYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEERE 533 (856)
Q Consensus 456 ly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~ 533 (856)
+|+.||++++||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.+++++ ++++.
T Consensus 299 ~~~~adi~l~ps~~e~~~~~l~Ea~a~G----~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~-~~~~~ 373 (398)
T cd03800 299 LYRAADVFVNPALYEPFGLTALEAMACG----LPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTD-PALRR 373 (398)
T ss_pred HHHhCCEEEecccccccCcHHHHHHhcC----CCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhC-HHHHH
Confidence 9999999999999999999999999994 899999999999888 4579999999999999999999986 45777
Q ss_pred HHHHHHHHHH-HhcCHHHHHHHHH
Q 003029 534 KRHWHNFTHV-TTHTAQEWAETFV 556 (856)
Q Consensus 534 ~r~~~~~~~v-~~~~~~~W~~~fl 556 (856)
++..++++++ +.++++..++.++
T Consensus 374 ~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 374 RLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHh
Confidence 7888888888 8899999888775
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.2e-22 Score=221.39 Aligned_cols=232 Identities=16% Similarity=0.179 Sum_probs=174.0
Q ss_pred cCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh--cCCc
Q 003029 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRK 364 (856)
Q Consensus 287 ~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~ 364 (856)
.+|.+...+....+.+.. .++. ...++.++|+|||++.|.+..... ....++.+ .++.
T Consensus 136 ~~~~~i~vs~~~~~~~~~----~~~~-----------~~~~~~vi~ngvd~~~~~~~~~~~-----~~~~~~~~~~~~~~ 195 (374)
T TIGR03088 136 LIHHYVAVSRDLEDWLRG----PVKV-----------PPAKIHQIYNGVDTERFHPSRGDR-----SPILPPDFFADESV 195 (374)
T ss_pred cCCeEEEeCHHHHHHHHH----hcCC-----------ChhhEEEeccCccccccCCCccch-----hhhhHhhcCCCCCe
Confidence 367777777765554432 1121 235788899999998886432111 11111222 3577
Q ss_pred eEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEe
Q 003029 365 VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHL 444 (856)
Q Consensus 365 iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~ 444 (856)
+|+++||+++.||+..+++|+..+.++.|+...++.|+++|. ++.. +++++.+.+.+. ...++|
T Consensus 196 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~-----g~~~----~~~~~~~~~~~~-------~~~v~~ 259 (374)
T TIGR03088 196 VVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGD-----GPAR----GACEQMVRAAGL-------AHLVWL 259 (374)
T ss_pred EEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecC-----CchH----HHHHHHHHHcCC-------cceEEE
Confidence 999999999999999999999999999887655688988873 2322 233444433322 234556
Q ss_pred CCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHH
Q 003029 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIA 522 (856)
Q Consensus 445 ~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~ 522 (856)
.|. .+++..+|+.||++++||..||||++++|||||+ .|+|+|+.+|..+.+ |.+|++++|.|++++|++|.
T Consensus 260 ~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G----~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~ 333 (374)
T TIGR03088 260 PGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMASG----LPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQ 333 (374)
T ss_pred cCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHcC----CCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHH
Confidence 774 5789999999999999999999999999999994 899999999999988 56799999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHH
Q 003029 523 RALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 561 (856)
Q Consensus 523 ~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 561 (856)
+++++ ++++..+.+++++++ ..+++..-++++++-+++
T Consensus 334 ~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 334 PYVSD-PAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred HHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99985 446777888888887 689999888888776654
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-21 Score=216.69 Aligned_cols=275 Identities=16% Similarity=0.127 Sum_probs=194.9
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCc--hhhhhcCcc--cHHHHH-HhhcCCEEEEeCHHHH
Q 003029 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS--SEIHRTLPS--RSDLLR-AVLAADLVGFHTYDYA 299 (856)
Q Consensus 225 i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~--~e~fr~lp~--~~~il~-~ll~aDlIgf~t~~~~ 299 (856)
+.+..+ .|+||+|+.........+.+ ..++|+.+.+|..... .......++ ...+.+ .+..+|.|.+.+....
T Consensus 77 ~~~~~~-~dvvh~~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~ 154 (367)
T cd05844 77 LLRRHR-PDLVHAHFGFDGVYALPLAR-RLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFIR 154 (367)
T ss_pred HHHhhC-CCEEEeccCchHHHHHHHHH-HcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHHH
Confidence 344444 49999997654443333332 3467888888853211 111110011 112222 2346899988886555
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChH
Q 003029 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 379 (856)
Q Consensus 300 ~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~ 379 (856)
+.+... +. ...++.++|+|+|.+.|.+... ..+++.|+++||+.+.||++
T Consensus 155 ~~~~~~-----~~-----------~~~~i~vi~~g~d~~~~~~~~~--------------~~~~~~i~~~G~~~~~K~~~ 204 (367)
T cd05844 155 DRLLAL-----GF-----------PPEKVHVHPIGVDTAKFTPATP--------------ARRPPRILFVGRFVEKKGPL 204 (367)
T ss_pred HHHHHc-----CC-----------CHHHeEEecCCCCHHhcCCCCC--------------CCCCcEEEEEEeeccccChH
Confidence 444321 21 2347889999999988764311 12467899999999999999
Q ss_pred HHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 003029 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (856)
Q Consensus 380 ~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ 459 (856)
.+++|+..+.+++|++ .|+++|. ++. .+++++++.+.+.. ..|. +.|.++.+++..+|+.
T Consensus 205 ~li~a~~~l~~~~~~~----~l~ivG~-----g~~----~~~~~~~~~~~~~~------~~v~-~~g~~~~~~l~~~~~~ 264 (367)
T cd05844 205 LLLEAFARLARRVPEV----RLVIIGD-----GPL----LAALEALARALGLG------GRVT-FLGAQPHAEVRELMRR 264 (367)
T ss_pred HHHHHHHHHHHhCCCe----EEEEEeC-----chH----HHHHHHHHHHcCCC------CeEE-ECCCCCHHHHHHHHHh
Confidence 9999999998887764 4887763 232 23445554443211 1254 5899999999999999
Q ss_pred ccEEEECCC------CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHH
Q 003029 460 TDVALVTSL------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 531 (856)
Q Consensus 460 ADv~v~~S~------~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~e 531 (856)
||++++||. .||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++++ +.
T Consensus 265 ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G----~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~-~~ 339 (367)
T cd05844 265 ARIFLQPSVTAPSGDAEGLPVVLLEAQASG----VPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLADP-DL 339 (367)
T ss_pred CCEEEECcccCCCCCccCCchHHHHHHHcC----CCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcCH-HH
Confidence 999999997 599999999999994 899999999998887 56799999999999999999999854 46
Q ss_pred HHHHHHHHHHHH-HhcCHHHHHHHHH
Q 003029 532 REKRHWHNFTHV-TTHTAQEWAETFV 556 (856)
Q Consensus 532 r~~r~~~~~~~v-~~~~~~~W~~~fl 556 (856)
+.++..++++++ ..+++..+++.+.
T Consensus 340 ~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 340 RARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 777778888887 5789998888764
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.4e-23 Score=212.51 Aligned_cols=192 Identities=21% Similarity=0.362 Sum_probs=144.2
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeCceEE
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFL 672 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaenG~~i 672 (856)
||++|+||||+++. ..+++++++++|++|++ .|+.|+|+|||+...+..+++.++.++|++||+++
T Consensus 1 li~~D~DgTL~~~~-------------~~~~~~~~~~~l~~l~~-~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i 66 (204)
T TIGR01484 1 LLFFDLDGTLLDPN-------------AHELSPETIEALERLRE-AGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALI 66 (204)
T ss_pred CEEEeCcCCCcCCC-------------CCcCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEE
Confidence 58999999999862 24689999999999997 57999999999999999999988889999999999
Q ss_pred EecCC-eeeecccccCChH---HHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCC-
Q 003029 673 RCTTG-KWMTTMPEHLNME---WVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPIS- 747 (856)
Q Consensus 673 ~~~~~-~w~~~~~~~~~~~---w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~- 747 (856)
+..++ .|.. +...... +.+.+..+++.+....++..++.+...+.++|+.... ......++...+ .....
T Consensus 67 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~ 141 (204)
T TIGR01484 67 FYPGEILYIE--PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAEL--GQELDSKMRERL-EKIGRN 141 (204)
T ss_pred EECCEEEEEc--ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccch--hhHHHHHHHHHH-Hhhccc
Confidence 86433 3432 1111111 1233344455556667788888899999999986511 111223344444 32221
Q ss_pred CCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCccccccccccc
Q 003029 748 NASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFL 811 (856)
Q Consensus 748 ~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~ 811 (856)
...+.++ ++..++||+|++++||.|++.++++++ ++.+++++||| +.||++| |+.+
T Consensus 142 ~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~------~~~~~~~~~GD-~~nD~~~-~~~~ 198 (204)
T TIGR01484 142 DLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN------GKRDEILAFGD-SGNDEEM-FEVA 198 (204)
T ss_pred cCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC------CCHHHEEEEcC-CHHHHHH-HHHc
Confidence 2457777 588999999999999999999999998 56899999999 9999999 8866
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.6e-21 Score=219.65 Aligned_cols=291 Identities=11% Similarity=0.002 Sum_probs=191.1
Q ss_pred HHHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeE-EEEEecCCCchhhhhcCcccHHHH----HHhhcCCEEEEeCHHH
Q 003029 224 VVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKV-GWFLHTPFPSSEIHRTLPSRSDLL----RAVLAADLVGFHTYDY 298 (856)
Q Consensus 224 ~i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i-~~flH~PfP~~e~fr~lp~~~~il----~~ll~aDlIgf~t~~~ 298 (856)
.++...+ .|+||.|++...+++.+..... ..++ ....|. +++.. ++.++ ..+..++++.-.+. +
T Consensus 274 ~~ir~~r-pDIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~-------~~r~~~~e~~~~~~a~~i~~~sd-~ 342 (578)
T PRK15490 274 PHLCERK-LDYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVV-------RKRLFKPEYEPLYQALAVVPGVD-F 342 (578)
T ss_pred HHHHHcC-CCEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcc-------hhhHHHHHHHHhhhhceeEecch-h
Confidence 3344444 4999999999877766665544 3444 455665 33211 11111 12334455443332 3
Q ss_pred HHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh-cCCceEEEeecccccCC
Q 003029 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKG 377 (856)
Q Consensus 299 ~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~V~Rld~~KG 377 (856)
+.+.....+.+.. .+.....++.+||||||++.|.+....+ ......++..+ .+.++|++|+|+.+.||
T Consensus 343 v~~s~~v~~~l~~--------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg 412 (578)
T PRK15490 343 MSNNHCVTRHYAD--------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFVGDKN 412 (578)
T ss_pred hhccHHHHHHHHH--------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEehhcC
Confidence 2222211111100 0112456899999999999887642111 11112222223 35578899999999999
Q ss_pred hHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHH
Q 003029 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 457 (856)
Q Consensus 378 i~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly 457 (856)
...+|+|+.+++++.|++ .|+++|. ++.. +++++++.+.+.. ..|+| .|+ .+++..+|
T Consensus 413 ~~~LI~A~a~llk~~pdi----rLvIVGd-----G~~~----eeLk~la~elgL~------d~V~F-lG~--~~Dv~~~L 470 (578)
T PRK15490 413 PFAWIDFAARYLQHHPAT----RFVLVGD-----GDLR----AEAQKRAEQLGIL------ERILF-VGA--SRDVGYWL 470 (578)
T ss_pred HHHHHHHHHHHHhHCCCe----EEEEEeC-----chhH----HHHHHHHHHcCCC------CcEEE-CCC--hhhHHHHH
Confidence 999999999999888875 4887863 3332 3455555443321 13554 676 46899999
Q ss_pred HHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCC--HHHHH
Q 003029 458 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMS--PEERE 533 (856)
Q Consensus 458 ~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~--~~er~ 533 (856)
+.||+||+||.+||||++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|++++++++..+..+. .+.+.
T Consensus 471 aaADVfVlPS~~EGfp~vlLEAMA~G----lPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~ 546 (578)
T PRK15490 471 QKMNVFILFSRYEGLPNVLIEAQMVG----VPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRT 546 (578)
T ss_pred HhCCEEEEcccccCccHHHHHHHHhC----CCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999994 899999999999987 67899999999999988874332211 22444
Q ss_pred HHHHHHHHHH-HhcCHHHHHHHHHHHHHH
Q 003029 534 KRHWHNFTHV-TTHTAQEWAETFVSELND 561 (856)
Q Consensus 534 ~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 561 (856)
.+.+++++++ +.|++..-++.+++.++.
T Consensus 547 ~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 547 GICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 5667788887 568999888888877664
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.2e-21 Score=216.99 Aligned_cols=283 Identities=17% Similarity=0.149 Sum_probs=190.7
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHH---------HHhhcCCEEEEeCHHHHH
Q 003029 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL---------RAVLAADLVGFHTYDYAR 300 (856)
Q Consensus 230 ~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il---------~~ll~aDlIgf~t~~~~~ 300 (856)
...|+|++|+..... + +++... ..++.+.+|.| .......-...+.+. ..+..+|.|...+.....
T Consensus 93 ~~~Dvi~~~~~~~~~-~-~~~~~~-~~~~i~~~h~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~ 167 (392)
T cd03805 93 EKYDVFIVDQVSACV-P-LLKLFS-PSKILFYCHFP--DQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTAS 167 (392)
T ss_pred CCCCEEEEcCcchHH-H-HHHHhc-CCcEEEEEecC--hHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHH
Confidence 467999999866432 2 233333 38899999954 221111001111111 113457888776654433
Q ss_pred HHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHH
Q 003029 301 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQ 380 (856)
Q Consensus 301 ~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~ 380 (856)
.+.. .++.. ....+.++|+|||.+.|.+....+ .........+..+|+++||+.+.||++.
T Consensus 168 ~~~~----~~~~~----------~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~~~ 228 (392)
T cd03805 168 VFKK----TFPSL----------AKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNIAL 228 (392)
T ss_pred HHHH----Hhccc----------ccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCChHH
Confidence 3322 11100 112345889999998886532111 0011111257789999999999999999
Q ss_pred HHHHHHHHHHhC---cCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHH-hhcccCCCCcccEEEeCCCCCHHHHHHH
Q 003029 381 KLLAFEKFLEEN---SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGR-INGRFGTLTAVPIHHLDRSLDFPALCAL 456 (856)
Q Consensus 381 ~L~Af~~~l~~~---P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~-IN~~~g~~~~~pV~~~~g~v~~~el~al 456 (856)
+|+|++++.+++ |+ +.|+++|.+... .++...+.+++++++.+ .+.. ..|+ |.|.++.+++..+
T Consensus 229 ll~a~~~l~~~~~~~~~----~~l~i~G~~~~~-~~~~~~~~~~l~~~~~~~~~l~------~~V~-f~g~~~~~~~~~~ 296 (392)
T cd03805 229 AIEAFAILKDKLAEFKN----VRLVIAGGYDPR-VAENVEYLEELQRLAEELLLLE------DQVI-FLPSISDSQKELL 296 (392)
T ss_pred HHHHHHHHHhhcccccC----eEEEEEcCCCCC-CchhHHHHHHHHHHHHHhcCCC------ceEE-EeCCCChHHHHHH
Confidence 999999998876 55 558888754321 12222344556666554 3221 1355 4899999999999
Q ss_pred HHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHH
Q 003029 457 YAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREK 534 (856)
Q Consensus 457 y~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~ 534 (856)
|+.||++++||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++| |++++|++|.++++++. ++.+
T Consensus 297 l~~ad~~l~~s~~E~~g~~~lEAma~G----~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~-~~~~ 370 (392)
T cd03805 297 LSSARALLYTPSNEHFGIVPLEAMYAG----KPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPD-LADR 370 (392)
T ss_pred HhhCeEEEECCCcCCCCchHHHHHHcC----CCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhChH-HHHH
Confidence 999999999999999999999999994 899999999988888 457999977 99999999999998764 6777
Q ss_pred HHHHHHHHH-HhcCHHHHHHH
Q 003029 535 RHWHNFTHV-TTHTAQEWAET 554 (856)
Q Consensus 535 r~~~~~~~v-~~~~~~~W~~~ 554 (856)
+.+++++++ ..+++...++.
T Consensus 371 ~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 371 MGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHHHHhcCHHHHhhh
Confidence 888888877 56787777654
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.5e-21 Score=212.73 Aligned_cols=281 Identities=20% Similarity=0.255 Sum_probs=198.3
Q ss_pred HHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHH-hhcCCEEEEeCHHHHHHHHH
Q 003029 226 NKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFVS 304 (856)
Q Consensus 226 ~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~-ll~aDlIgf~t~~~~~~Fl~ 304 (856)
++..+ .|+||+|.+|..++..+++...+..++....|...+...+ +..+.+. ...++.+...+....+.|+.
T Consensus 75 ~~~~~-pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 147 (360)
T cd04951 75 LRQFK-PDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDYFIA 147 (360)
T ss_pred HHhcC-CCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHHHHh
Confidence 33444 5899999999888888887777777888888864321111 0111111 11245554455544444432
Q ss_pred HHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHHH
Q 003029 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 381 (856)
Q Consensus 305 ~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~~ 381 (856)
. + .-...++.++|+|+|...|.+.. .....+++++ .++++++++||+.+.||+..+
T Consensus 148 ~-----~----------~~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~l 206 (360)
T cd04951 148 S-----K----------AFNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNL 206 (360)
T ss_pred c-----c----------CCCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHH
Confidence 1 0 01235788999999988875431 1223355554 367899999999999999999
Q ss_pred HHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 003029 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (856)
Q Consensus 382 L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~AD 461 (856)
++|+.++.+++|++ .|+++|. ++.... +.+.+.+.+.. ..|.+ .|.. +++..+|+.||
T Consensus 207 i~a~~~l~~~~~~~----~l~i~G~-----g~~~~~----~~~~~~~~~~~------~~v~~-~g~~--~~~~~~~~~ad 264 (360)
T cd04951 207 LKAFAKLLSDYLDI----KLLIAGD-----GPLRAT----LERLIKALGLS------NRVKL-LGLR--DDIAAYYNAAD 264 (360)
T ss_pred HHHHHHHHhhCCCe----EEEEEcC-----CCcHHH----HHHHHHhcCCC------CcEEE-eccc--ccHHHHHHhhc
Confidence 99999998888765 4777763 232223 33344333321 12554 5654 68999999999
Q ss_pred EEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 003029 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (856)
Q Consensus 462 v~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~ 541 (856)
++++||..||||++++|||||+ .|+|+|+.+|..+.+.++|.+++|.|++++|++|.++++++++.+..+..+...
T Consensus 265 ~~v~~s~~e~~~~~~~Ea~a~G----~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~ 340 (360)
T cd04951 265 LFVLSSAWEGFGLVVAEAMACE----LPVVATDAGGVREVVGDSGLIVPISDPEALANKIDEILKMSGEERDIIGARRER 340 (360)
T ss_pred eEEecccccCCChHHHHHHHcC----CCEEEecCCChhhEecCCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999999999999999999994 899999999998888668999999999999999999998777676666665333
Q ss_pred HHHhcCHHHHHHHHHHHHH
Q 003029 542 HVTTHTAQEWAETFVSELN 560 (856)
Q Consensus 542 ~v~~~~~~~W~~~fl~~l~ 560 (856)
..+.+++..+++.+++-+.
T Consensus 341 ~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 341 IVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHhcCHHHHHHHHHHHhh
Confidence 4578999999998887553
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=4e-21 Score=220.26 Aligned_cols=273 Identities=18% Similarity=0.186 Sum_probs=185.1
Q ss_pred CCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcC-------------cccH--HH-----------H--H
Q 003029 232 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL-------------PSRS--DL-----------L--R 283 (856)
Q Consensus 232 ~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~l-------------p~~~--~i-----------l--~ 283 (856)
+|+|..|--+...+ .+.+..+++|+++.+|.|.-+++.+..+ ..+. .+ + .
T Consensus 108 pDv~i~~~g~~~~~--~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~ 185 (419)
T cd03806 108 PDIFIDTMGYPFTY--PLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFLYGL 185 (419)
T ss_pred CCEEEEcCCcccHH--HHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHHHHH
Confidence 58665553233323 2444556889999999654455544221 1111 01 1 1
Q ss_pred HhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCC
Q 003029 284 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGR 363 (856)
Q Consensus 284 ~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~ 363 (856)
.+-.||.|...+.....++.+ .. +...++.++|+|+|.+.|.+... ....++
T Consensus 186 ~~~~aD~ii~~S~~~~~~~~~----~~------------~~~~~~~vi~~gvd~~~~~~~~~------------~~~~~~ 237 (419)
T cd03806 186 AGSFADVVMVNSTWTRNHIRS----LW------------KRNTKPSIVYPPCDVEELLKLPL------------DEKTRE 237 (419)
T ss_pred HhhcCCEEEECCHHHHHHHHH----Hh------------CcCCCcEEEcCCCCHHHhccccc------------ccccCC
Confidence 234678877766544434321 11 11136789999999988754311 012356
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHhCcCc-cCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 003029 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDW-RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (856)
Q Consensus 364 ~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~-~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~ 442 (856)
++|++|||+.+.||+..+|+||..+.+..|+. +.++.|+++|...... ..++.+++++++.+.+.. ..|+
T Consensus 238 ~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~---~~~~~~~L~~~~~~l~l~------~~V~ 308 (419)
T cd03806 238 NQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNED---DEKRVEDLKLLAKELGLE------DKVE 308 (419)
T ss_pred cEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcc---cHHHHHHHHHHHHHhCCC------CeEE
Confidence 79999999999999999999999999888752 1246788887532111 123445666666654431 1255
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchh-hc-----cCCeEEECCCCHHH
Q 003029 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL-----GAGAILVNPWNITE 516 (856)
Q Consensus 443 ~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~-~l-----g~~g~lVnP~d~~~ 516 (856)
|.+.++.+++..+|+.||++++||..||||++++|||||+ .|+|+|+.+|..+ .+ |.+|++++ |+++
T Consensus 309 -f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G----~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~ 381 (419)
T cd03806 309 -FVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAG----LIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEE 381 (419)
T ss_pred -EecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcC----CcEEEEcCCCCchheeeccCCCCceEEeC--CHHH
Confidence 5789999999999999999999999999999999999994 8899999888654 34 45799974 9999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHH
Q 003029 517 VANAIARALNMSPEEREKRHWHNFTHVTTHTAQE 550 (856)
Q Consensus 517 lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~ 550 (856)
+|++|.++++++++++..+.+..+...+.+++..
T Consensus 382 la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~ 415 (419)
T cd03806 382 YAEAIEKILSLSEEERLRIRRAARSSVKRFSDEE 415 (419)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHH
Confidence 9999999999988666665455455556666544
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.3e-22 Score=216.29 Aligned_cols=201 Identities=15% Similarity=0.236 Sum_probs=136.9
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc--eEEee
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAE 667 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--gliae 667 (856)
.+|+|++|+||||+++ +..++++++++|++|.+ +|+.|+|+|||+...+.+.+..+++ ++|++
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~~~~-~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~ 66 (264)
T COG0561 2 MIKLLAFDLDGTLLDS--------------NKTISPETKEALARLRE-KGVKVVLATGRPLPDVLSILEELGLDGPLITF 66 (264)
T ss_pred CeeEEEEcCCCCccCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCccEEEe
Confidence 5799999999999998 45699999999999986 7999999999999999999999964 69999
Q ss_pred CceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhc--CCCcEEeeecce------------EEE-----EeecC---
Q 003029 668 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTER--TPRSHFEQRETS------------LVW-----NYKYA--- 725 (856)
Q Consensus 668 nG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~r--t~gs~ie~k~~s------------i~~-----~y~~~--- 725 (856)
||++|...++. +.....+ .+.+..+++..... ....+....... ... .....
T Consensus 67 NGa~i~~~~~~---i~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (264)
T COG0561 67 NGALIYNGGEL---LFQKPLS---REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAEL 140 (264)
T ss_pred CCeEEecCCcE---EeeecCC---HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhc
Confidence 99999975332 2222334 45555555544222 111111110000 000 00000
Q ss_pred Ch------hhhHHHHHHHHHHHhcCCCCCCCeEEEEcCc-EEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEec
Q 003029 726 DV------EFGRIQARDMLQHLWTGPISNASVEVVQGSK-SVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (856)
Q Consensus 726 d~------e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~-~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD 798 (856)
+. ........++.+.+ .+.+....+.+.++.. ++||.|+|+|||.|+++|++++| ++.++||||||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lg------i~~~~v~afGD 213 (264)
T COG0561 141 EDNKIIALDKDHEILEELVEAL-RKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLG------IKLEEVIAFGD 213 (264)
T ss_pred CcceEEEEecChHhHHHHHHHH-hhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhC------CCHHHeEEeCC
Confidence 00 00011223333344 3333333455666654 49999999999999999999999 66889999999
Q ss_pred CCcccccccccccccCcceEEeCCC
Q 003029 799 FLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 799 ~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
+.||++| |+++ +.+|.++|.
T Consensus 214 -~~ND~~M-l~~a---g~gvam~Na 233 (264)
T COG0561 214 -STNDIEM-LEVA---GLGVAMGNA 233 (264)
T ss_pred -ccccHHH-HHhc---CeeeeccCC
Confidence 9999999 9865 788888886
|
|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.9e-21 Score=218.56 Aligned_cols=284 Identities=15% Similarity=0.132 Sum_probs=195.3
Q ss_pred CEEEEeCcc-chhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcc-------------------cHHH-------HH--
Q 003029 233 DVVWCHDYH-LMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPS-------------------RSDL-------LR-- 283 (856)
Q Consensus 233 DvIwvHDyh-l~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~-------------------~~~i-------l~-- 283 (856)
+.|||-.-- ...+| ++| ....||++.+|.|.-+.+....+-. .+.+ +.
T Consensus 140 p~v~vDt~~~~~~~p-l~~--~~~~~v~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~ 216 (463)
T PLN02949 140 PLYFFDTSGYAFTYP-LAR--LFGCKVVCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGL 216 (463)
T ss_pred CCEEEeCCCcccHHH-HHH--hcCCcEEEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHH
Confidence 357874322 12223 233 3368999999988766644432210 0110 11
Q ss_pred HhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCC
Q 003029 284 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGR 363 (856)
Q Consensus 284 ~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~ 363 (856)
.+..+|.|...+.-..+++.+ ..+ ...++.++++|+|.+.|..... ....++
T Consensus 217 ~~~~ad~ii~nS~~t~~~l~~----~~~------------~~~~i~vvyp~vd~~~~~~~~~------------~~~~~~ 268 (463)
T PLN02949 217 VGRCAHLAMVNSSWTKSHIEA----LWR------------IPERIKRVYPPCDTSGLQALPL------------ERSEDP 268 (463)
T ss_pred HcCCCCEEEECCHHHHHHHHH----HcC------------CCCCeEEEcCCCCHHHcccCCc------------cccCCC
Confidence 124578777665543333321 111 1236778999999877632110 001356
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEE
Q 003029 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (856)
Q Consensus 364 ~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 443 (856)
+++++|||+.+.||+..+|+||.++.++.++-..++.|+++|... . ++..++.+++++++.+.+-. + .|.|
T Consensus 269 ~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~-~--~~~~~~~~eL~~la~~l~L~----~--~V~f 339 (463)
T PLN02949 269 PYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCR-N--KEDEERLQKLKDRAKELGLD----G--DVEF 339 (463)
T ss_pred CEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCC-C--cccHHHHHHHHHHHHHcCCC----C--cEEE
Confidence 789999999999999999999999887544222245688888542 1 11123344556666554321 1 2664
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchh-hc-----cCCeEEECCCCHHHH
Q 003029 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL-----GAGAILVNPWNITEV 517 (856)
Q Consensus 444 ~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~-~l-----g~~g~lVnP~d~~~l 517 (856)
.|.++.+++.++|+.||+++.||..||||++++|||||+ .|+|+|..+|..+ .+ |.+|++++ |++++
T Consensus 340 -~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G----~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~l 412 (463)
T PLN02949 340 -HKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAG----AVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEY 412 (463)
T ss_pred -eCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcC----CcEEEeCCCCCcceeeecCCCCcccccCC--CHHHH
Confidence 799999999999999999999999999999999999994 8999999988753 33 34688874 99999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhH
Q 003029 518 ANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563 (856)
Q Consensus 518 A~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 563 (856)
|++|.++++++++++.++.+++++.+.+++++.-++++++.++...
T Consensus 413 a~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~ 458 (463)
T PLN02949 413 ADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPIL 458 (463)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 9999999998888888888999999999999998888888777653
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-20 Score=210.48 Aligned_cols=277 Identities=16% Similarity=0.164 Sum_probs=194.3
Q ss_pred CCCEEEEeCccchhHHHHHHhcC---CCCeEEEEEecCCCchhhhhcCcccH-HHHHHhhcCCEEEEeCHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYN---SDMKVGWFLHTPFPSSEIHRTLPSRS-DLLRAVLAADLVGFHTYDYARHFVSAC 306 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~---~~~~i~~flH~PfP~~e~fr~lp~~~-~il~~ll~aDlIgf~t~~~~~~Fl~~~ 306 (856)
..|+|++|.+....++.++..+. .+.++.+.+|..-.. ....-+... -+...+..+|.|...+......+...
T Consensus 84 ~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~- 160 (371)
T cd04962 84 KLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVTAVSESLRQETYEL- 160 (371)
T ss_pred CccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEEEcCHHHHHHHHHh-
Confidence 45999999876555555544322 267888888853111 011111122 22334567999999888766555431
Q ss_pred HHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHHHHH
Q 003029 307 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLL 383 (856)
Q Consensus 307 ~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~~L~ 383 (856)
. +...++.++|+|+|...|.+... ...++++ .++++++++||+.+.||+..+++
T Consensus 161 ---~------------~~~~~i~vi~n~~~~~~~~~~~~--------~~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~ 217 (371)
T cd04962 161 ---F------------DITKEIEVIPNFVDEDRFRPKPD--------EALKRRLGAPEGEKVLIHISNFRPVKRIDDVIR 217 (371)
T ss_pred ---c------------CCcCCEEEecCCcCHhhcCCCch--------HHHHHhcCCCCCCeEEEEecccccccCHHHHHH
Confidence 1 12346889999999887754211 1122333 36789999999999999999999
Q ss_pred HHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 003029 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (856)
Q Consensus 384 Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~ 463 (856)
|+..+.++ ++ +.|+++|.+ ++...+ ++++.+.+.. ..|.+ .|.. +++..+|+.||++
T Consensus 218 a~~~l~~~-~~----~~l~i~G~g-----~~~~~~----~~~~~~~~~~------~~v~~-~g~~--~~~~~~~~~~d~~ 274 (371)
T cd04962 218 IFAKVRKE-VP----ARLLLVGDG-----PERSPA----ERLARELGLQ------DDVLF-LGKQ--DHVEELLSIADLF 274 (371)
T ss_pred HHHHHHhc-CC----ceEEEEcCC-----cCHHHH----HHHHHHcCCC------ceEEE-ecCc--ccHHHHHHhcCEE
Confidence 99988654 33 347777642 222233 3333332211 12554 5654 5799999999999
Q ss_pred EECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 003029 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (856)
Q Consensus 464 v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~ 541 (856)
++||..||||++++|||+|+ .|+|+|+.+|.++.+ |.+|++++|.|++++|++|.+++++ ++++.++.+++++
T Consensus 275 v~ps~~E~~~~~~~EAma~g----~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~ 349 (371)
T cd04962 275 LLPSEKESFGLAALEAMACG----VPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLED-DELWQEFSRAARN 349 (371)
T ss_pred EeCCCcCCCccHHHHHHHcC----CCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHH
Confidence 99999999999999999994 899999999999888 5679999999999999999999985 4477777788888
Q ss_pred H-HHhcCHHHHHHHHHHHHHH
Q 003029 542 H-VTTHTAQEWAETFVSELND 561 (856)
Q Consensus 542 ~-v~~~~~~~W~~~fl~~l~~ 561 (856)
. ...+++...++.+++.+++
T Consensus 350 ~~~~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 350 RAAERFDSERIVPQYEALYRR 370 (371)
T ss_pred HHHHhCCHHHHHHHHHHHHHh
Confidence 7 5778999998888876654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=7e-21 Score=227.37 Aligned_cols=280 Identities=14% Similarity=0.092 Sum_probs=185.2
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEE-EEecCCCc---hhhhhcCcccHHHHHHhhcCCEEEEe--CHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGW-FLHTPFPS---SEIHRTLPSRSDLLRAVLAADLVGFH--TYDYARHFVS 304 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~-flH~PfP~---~e~fr~lp~~~~il~~ll~aDlIgf~--t~~~~~~Fl~ 304 (856)
..|||++|++.-..+..+..... .+|+.+ .+|+ +|. .+.++. ....+...+..++.+.+. +....+.+..
T Consensus 400 kpDIVH~h~~~a~~lg~lAa~~~-gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~ 475 (694)
T PRK15179 400 VPSVVHIWQDGSIFACALAALLA-GVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFAAHRYAD 475 (694)
T ss_pred CCcEEEEeCCcHHHHHHHHHHHc-CCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHHHHHHHH
Confidence 35999999998877766665433 455544 4565 221 121110 011122333334433332 2222222221
Q ss_pred HHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhc-CCceEEEeecccccCChHHHHH
Q 003029 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA-GRKVMLGVDRLDMIKGIPQKLL 383 (856)
Q Consensus 305 ~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~iIl~V~Rld~~KGi~~~L~ 383 (856)
.++ ....++.++|||||++.|.+. +........++.... +.++|++|||+++.||+..+|+
T Consensus 476 ----~~g-----------~~~~kI~VI~NGVd~~~f~~~---~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~ 537 (694)
T PRK15179 476 ----WLG-----------VDERRIPVVYNGLAPLKSVQD---DACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVE 537 (694)
T ss_pred ----HcC-----------CChhHEEEECCCcCHHhcCCC---chhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHH
Confidence 112 134588999999999888542 211111122222222 4668999999999999999999
Q ss_pred HHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 003029 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (856)
Q Consensus 384 Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~ 463 (856)
||..+++++|+++ |+++|. ++. ++++++++.+.+.. ..++|.|.. +++..+|+.||+|
T Consensus 538 A~a~l~~~~p~~~----LvIvG~-----G~~----~~~L~~l~~~lgL~-------~~V~flG~~--~dv~~ll~aaDv~ 595 (694)
T PRK15179 538 AAQRFAASHPKVR----FIMVGG-----GPL----LESVREFAQRLGMG-------ERILFTGLS--RRVGYWLTQFNAF 595 (694)
T ss_pred HHHHHHHHCcCeE----EEEEcc-----Ccc----hHHHHHHHHHcCCC-------CcEEEcCCc--chHHHHHHhcCEE
Confidence 9999999998754 888874 232 23455555554321 233457875 4799999999999
Q ss_pred EECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCH--HHHHHHHHHHHcCCHHHHHHHHHHH
Q 003029 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI--TEVANAIARALNMSPEEREKRHWHN 539 (856)
Q Consensus 464 v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~--~~lA~ai~~aL~~~~~er~~r~~~~ 539 (856)
|+||.+||||++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|+ ++++++|.+++.... ....+.+++
T Consensus 596 VlpS~~Egfp~vlLEAMA~G----~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~-~~~~l~~~a 670 (694)
T PRK15179 596 LLLSRFEGLPNVLIEAQFSG----VPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCA-ADPGIARKA 670 (694)
T ss_pred EeccccccchHHHHHHHHcC----CeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChh-ccHHHHHHH
Confidence 99999999999999999994 899999999999888 567999998874 689999998887543 233445667
Q ss_pred HHHH-HhcCHHHHHHHHHHHH
Q 003029 540 FTHV-TTHTAQEWAETFVSEL 559 (856)
Q Consensus 540 ~~~v-~~~~~~~W~~~fl~~l 559 (856)
++++ +.|++..-++.+++-+
T Consensus 671 r~~a~~~FS~~~~~~~~~~lY 691 (694)
T PRK15179 671 ADWASARFSLNQMIASTVRCY 691 (694)
T ss_pred HHHHHHhCCHHHHHHHHHHHh
Confidence 7776 5788888777776644
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-20 Score=218.89 Aligned_cols=274 Identities=16% Similarity=0.092 Sum_probs=188.9
Q ss_pred cCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCc-hhhhhcCc-c---cHHHHHHhhcCCEEEEeCHHHHHHHH
Q 003029 229 YKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS-SEIHRTLP-S---RSDLLRAVLAADLVGFHTYDYARHFV 303 (856)
Q Consensus 229 ~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~-~e~fr~lp-~---~~~il~~ll~aDlIgf~t~~~~~~Fl 303 (856)
..++|+++++-.+.... . +.+..+.+++..++|.-.-. ...-...+ + -+..+..+-.+|.|...|....+...
T Consensus 209 ~~~~di~i~dr~~~~~~-~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~ 286 (500)
T TIGR02918 209 LTKKDIIILDRSTGIGQ-A-VLENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILK 286 (500)
T ss_pred CCCCCEEEEcCCcccch-H-HHhcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHH
Confidence 45679998876554433 3 33556789999999964211 00000000 1 12223445567888877765444433
Q ss_pred HHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHH
Q 003029 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLL 383 (856)
Q Consensus 304 ~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~ 383 (856)
..... +.+...+|.++|+|++...+.+. ....+..|++||||.+.||+..+|+
T Consensus 287 ~~~~~------------~~~~~~ki~viP~g~~~~~~~~~---------------~~r~~~~il~vGrl~~~Kg~~~li~ 339 (500)
T TIGR02918 287 NQFKK------------YYNIEPRIYTIPVGSLDELQYPE---------------QERKPFSIITASRLAKEKHIDWLVK 339 (500)
T ss_pred HHhhh------------hcCCCCcEEEEcCCCcccccCcc---------------cccCCeEEEEEeccccccCHHHHHH
Confidence 21111 12234578899999876543311 0123468999999999999999999
Q ss_pred HHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 003029 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (856)
Q Consensus 384 Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~ 463 (856)
|+.++.++.|++ .|+++|. +++. +++++++.+.+.. + .|. |.|.. ++..+|+.||++
T Consensus 340 A~~~l~~~~p~~----~l~i~G~-----G~~~----~~l~~~i~~~~l~----~--~V~-f~G~~---~~~~~~~~adv~ 396 (500)
T TIGR02918 340 AVVKAKKSVPEL----TFDIYGE-----GGEK----QKLQKIINENQAQ----D--YIH-LKGHR---NLSEVYKDYELY 396 (500)
T ss_pred HHHHHHhhCCCe----EEEEEEC-----chhH----HHHHHHHHHcCCC----C--eEE-EcCCC---CHHHHHHhCCEE
Confidence 999999999875 4777763 3433 3455555543321 1 255 47764 578899999999
Q ss_pred EECCCCcCCChhHHHHHhhcCCCCceEEEeCCC-Cchhhc--cCCeEEECC----CC----HHHHHHHHHHHHcCCHHHH
Q 003029 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA-GAAQSL--GAGAILVNP----WN----ITEVANAIARALNMSPEER 532 (856)
Q Consensus 464 v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~a-G~~~~l--g~~g~lVnP----~d----~~~lA~ai~~aL~~~~~er 532 (856)
|+||.+||||++++|||||| .|+|+|+.. |..+.+ |.+|++|++ .| ++++|++|.++|+ ++++
T Consensus 397 v~pS~~Egfgl~~lEAma~G----~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~--~~~~ 470 (500)
T TIGR02918 397 LSASTSEGFGLTLMEAVGSG----LGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN--SNDI 470 (500)
T ss_pred EEcCccccccHHHHHHHHhC----CCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC--hHHH
Confidence 99999999999999999994 899999986 777777 778999984 33 8999999999994 3467
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 003029 533 EKRHWHNFTHVTTHTAQEWAETFVSELN 560 (856)
Q Consensus 533 ~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 560 (856)
.++.+++++.++.+++..-++.+.+-++
T Consensus 471 ~~~~~~a~~~a~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 471 DAFHEYSYQIAEGFLTANIIEKWKKLVR 498 (500)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 7888888999999998888877776554
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-20 Score=215.27 Aligned_cols=285 Identities=15% Similarity=0.126 Sum_probs=199.0
Q ss_pred CCCCEEEEeCccchhHH--HHHHhcCCCCeEEEEEecCCCchhhhhc-Cc--ccH----HHHHH-hhcCCEEEEeCHHHH
Q 003029 230 KDGDVVWCHDYHLMFLP--KCLKEYNSDMKVGWFLHTPFPSSEIHRT-LP--SRS----DLLRA-VLAADLVGFHTYDYA 299 (856)
Q Consensus 230 ~~~DvIwvHDyhl~llp--~~lr~~~~~~~i~~flH~PfP~~e~fr~-lp--~~~----~il~~-ll~aDlIgf~t~~~~ 299 (856)
...|+||+|.......+ ..+++ ..+.++.+.+|--||..-+-.. .+ ... .+.+. +..+|.|...+....
T Consensus 105 ~~~Div~~~~p~~~~~~~~~~~~~-~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~ 183 (412)
T PRK10307 105 WRPDRVIGVVPTLFCAPGARLLAR-LSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMM 183 (412)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHH-hhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHH
Confidence 35699999986654322 23333 3456777777765543211111 10 001 11111 336899988888766
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccC
Q 003029 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIK 376 (856)
Q Consensus 300 ~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~K 376 (856)
+.+.. .+ ....++.++|+|||.+.|.+... + ....+++++ .++++|+++||+.+.|
T Consensus 184 ~~~~~-----~~-----------~~~~~i~vi~ngvd~~~~~~~~~-~----~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 184 NKARE-----KG-----------VAAEKVIFFPNWSEVARFQPVAD-A----DVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred HHHHH-----cC-----------CCcccEEEECCCcCHhhcCCCCc-c----chHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 65432 12 12457889999999998865321 1 122345555 3568999999999999
Q ss_pred ChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHH
Q 003029 377 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCAL 456 (856)
Q Consensus 377 Gi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~al 456 (856)
|+..+++|++.+ +++|+ +.|+++|. ++.. +++++++.+.+. ..|+| .|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~----~~l~ivG~-----g~~~----~~l~~~~~~~~l-------~~v~f-~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPD----LIFVICGQ-----GGGK----ARLEKMAQCRGL-------PNVHF-LPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCC----eEEEEECC-----ChhH----HHHHHHHHHcCC-------CceEE-eCCCCHHHHHHH
Confidence 999999999876 44555 55887763 3433 334444443322 23664 789999999999
Q ss_pred HHHccEEEECCCCcCCC----hhHHHHHhhcCCCCceEEEeCCCCc--hhhccCCeEEECCCCHHHHHHHHHHHHcCCHH
Q 003029 457 YAVTDVALVTSLRDGMN----LVSYEFVACQDLKKGVLILSEFAGA--AQSLGAGAILVNPWNITEVANAIARALNMSPE 530 (856)
Q Consensus 457 y~~ADv~v~~S~~EG~~----Lv~lEama~~~~~~g~lVlSe~aG~--~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~ 530 (856)
|+.||++++||..|+++ ...+|||||+ .|+|+|..+|. .+.+..+|++++|.|++++|++|.++++++ +
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~G----~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~~la~~i~~l~~~~-~ 375 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLASG----RNVVATAEPGTELGQLVEGIGVCVEPESVEALVAAIAALARQA-L 375 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHcC----CCEEEEeCCCchHHHHHhCCcEEeCCCCHHHHHHHHHHHHhCH-H
Confidence 99999999999999954 4579999994 89999988774 355556899999999999999999999865 5
Q ss_pred HHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHhH
Q 003029 531 EREKRHWHNFTHVT-THTAQEWAETFVSELNDTV 563 (856)
Q Consensus 531 er~~r~~~~~~~v~-~~~~~~W~~~fl~~l~~~~ 563 (856)
++..+.+++++++. .+|+...++.|++.+++..
T Consensus 376 ~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 376 LRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 77888888898885 6899999999999888654
|
|
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-20 Score=208.14 Aligned_cols=266 Identities=20% Similarity=0.218 Sum_probs=191.9
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (856)
..|+|++|..+...+..++.+ ..+.++.+.+|-.++.... .. ..+..+|.+.+.+....+.+. ...
T Consensus 78 ~~dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~------~~---~~~~~~~~vi~~s~~~~~~~~----~~~ 143 (355)
T cd03819 78 KVDIVHARSRAPAWSAYLAAR-RTRPPFVTTVHGFYSVNFR------YN---AIMARGDRVIAVSNFIADHIR----ENY 143 (355)
T ss_pred CCCEEEECCCchhHHHHHHHH-hcCCCEEEEeCCchhhHHH------HH---HHHHhcCEEEEeCHHHHHHHH----Hhc
Confidence 459999998776555554443 3378999999987653321 11 224468988887765544432 222
Q ss_pred CcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHHHHHHHHH
Q 003029 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEK 387 (856)
Q Consensus 311 g~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~~L~Af~~ 387 (856)
+. ...++.++|+|||...|.+....+ .....+++++ .++++|+++||+.+.||+..+++|+..
T Consensus 144 ~~-----------~~~k~~~i~ngi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~ 209 (355)
T cd03819 144 GV-----------DPDRIRVIPRGVDLDRFDPGAVPP---ERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALAR 209 (355)
T ss_pred CC-----------ChhhEEEecCCccccccCccccch---HHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHH
Confidence 22 235788999999998886532211 1222245544 367789999999999999999999999
Q ss_pred HHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECC
Q 003029 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTS 467 (856)
Q Consensus 388 ~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S 467 (856)
+.+.+|+ +.|+++|... ....+.+.+.+.+.+.+.. ..|.+ .|. .+++..+|+.||++++||
T Consensus 210 l~~~~~~----~~l~ivG~~~-----~~~~~~~~~~~~~~~~~~~------~~v~~-~g~--~~~~~~~l~~ad~~i~ps 271 (355)
T cd03819 210 LKKDDPD----VHLLIVGDAQ-----GRRFYYAELLELIKRLGLQ------DRVTF-VGH--CSDMPAAYALADIVVSAS 271 (355)
T ss_pred HHhcCCC----eEEEEEECCc-----ccchHHHHHHHHHHHcCCc------ceEEE-cCC--cccHHHHHHhCCEEEecC
Confidence 9887665 4588787532 1123344444444443221 12554 666 678999999999999999
Q ss_pred -CCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 003029 468 -LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (856)
Q Consensus 468 -~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~ 544 (856)
..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|..++..+++++.++.++++++++
T Consensus 272 ~~~e~~~~~l~EA~a~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 272 TEPEAFGRTAVEAQAMG----RPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVE 347 (355)
T ss_pred CCCCCCchHHHHHHhcC----CCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 7899999999999994 899999999988887 347999999999999999998888888899999999988886
Q ss_pred hc
Q 003029 545 TH 546 (856)
Q Consensus 545 ~~ 546 (856)
++
T Consensus 348 ~~ 349 (355)
T cd03819 348 TL 349 (355)
T ss_pred Hh
Confidence 54
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-21 Score=209.20 Aligned_cols=217 Identities=15% Similarity=0.197 Sum_probs=142.9
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEeeC
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliaen 668 (856)
+|||++|+||||++. +..++++++++|++|.+ +|+.|+|+|||+...+.+.+..++ .++|+.|
T Consensus 2 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 66 (272)
T PRK15126 2 ARLAAFDMDGTLLMP--------------DHHLGEKTLSTLARLRE-RDITLTFATGRHVLEMQHILGALSLDAYLITGN 66 (272)
T ss_pred ccEEEEeCCCcCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCCCCcEEecC
Confidence 589999999999986 45699999999999986 799999999999999999998885 4689999
Q ss_pred ceEEEe-cCCe-eeecccccCChHHHHHHHHHHHHHHhcC--------CCcEEeeecce-------EEEEeecCCh----
Q 003029 669 GMFLRC-TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERT--------PRSHFEQRETS-------LVWNYKYADV---- 727 (856)
Q Consensus 669 G~~i~~-~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt--------~gs~ie~k~~s-------i~~~y~~~d~---- 727 (856)
|+.|.. .++. +... ++ .+.+.++++...... .+.+....... ..+.+...+.
T Consensus 67 Ga~I~~~~~~~l~~~~----i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (272)
T PRK15126 67 GTRVHSLEGELLHRQD----LP---ADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLP 139 (272)
T ss_pred CcEEEcCCCCEEEeec----CC---HHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHcc
Confidence 999984 3332 3222 33 234444444322110 01111000000 0000000000
Q ss_pred --hh-------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEe
Q 003029 728 --EF-------GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (856)
Q Consensus 728 --e~-------~~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~G 797 (856)
.+ ......++.+.+ ...+. ..+.+. ++..++||.|+++|||+|+++|++++| ++.++++|||
T Consensus 140 ~~~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~g------i~~~~v~afG 211 (272)
T PRK15126 140 AHGVTKICFCGDHDDLTRLQIQL-NEALG-ERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLG------LSLADCMAFG 211 (272)
T ss_pred ccCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhC------CCHHHeEEec
Confidence 00 001112333333 22221 235554 356799999999999999999999999 6789999999
Q ss_pred cCCcccccccccccccCcceEEeCCCC------c-c--ccC--CHHHHHHHHHHHH
Q 003029 798 HFLGKNCNLPLQFLMQTISTVRLDSSF------L-H--YLR--MKMCMRFLSQNYL 842 (856)
Q Consensus 798 D~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~--~l~--~~~~~~~~l~~~~ 842 (856)
| +.||++| |+.+ +.+|.++|.. + | -.. +-.-|.++|++++
T Consensus 212 D-~~NDi~M-l~~a---g~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~ 262 (272)
T PRK15126 212 D-AMNDREM-LGSV---GRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWL 262 (272)
T ss_pred C-CHHHHHH-HHHc---CCceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHh
Confidence 9 9999999 8877 6799998852 2 3 233 3345899999887
|
|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-20 Score=207.82 Aligned_cols=251 Identities=18% Similarity=0.061 Sum_probs=172.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHH-HHhhcCCEEEEeCHHHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-RAVLAADLVGFHTYDYARHFVSACTRI 309 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il-~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (856)
+.|+|++|..+...++.++........+.+..|..+...+.+........+. ..+..+|.+...+....+.+...
T Consensus 80 ~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~---- 155 (358)
T cd03812 80 KYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLFGK---- 155 (358)
T ss_pred CCCEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHHhC----
Confidence 5699999998877777766665555556677787654433222111100111 12334677766665444433210
Q ss_pred hCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHHHHHHHH
Q 003029 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFE 386 (856)
Q Consensus 310 lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~~L~Af~ 386 (856)
....++.++|+|||.+.|..... ..+. ++.+ .++++|+++||+.+.||++.+++|+.
T Consensus 156 -------------~~~~~~~vi~ngvd~~~~~~~~~---~~~~----~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~ 215 (358)
T cd03812 156 -------------VKNKKFKVIPNGIDLEKFIFNEE---IRKK----RRELGILEDKFVIGHVGRFSEQKNHEFLIEIFA 215 (358)
T ss_pred -------------CCcccEEEEeccCcHHHcCCCch---hhhH----HHHcCCCCCCEEEEEEeccccccChHHHHHHHH
Confidence 12357889999999988764321 1111 2222 46789999999999999999999999
Q ss_pred HHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 003029 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (856)
Q Consensus 387 ~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~ 466 (856)
.+.+++|++ .|+++|. ++....+++ .+.+.+. . ..|.+ .|. .+++..+|+.||++|+|
T Consensus 216 ~l~~~~~~~----~l~ivG~-----g~~~~~~~~----~~~~~~~----~--~~v~~-~g~--~~~~~~~~~~adi~v~p 273 (358)
T cd03812 216 ELLKKNPNA----KLLLVGD-----GELEEEIKK----KVKELGL----E--DKVIF-LGV--RNDVPELLQAMDVFLFP 273 (358)
T ss_pred HHHHhCCCe----EEEEEeC-----CchHHHHHH----HHHhcCC----C--CcEEE-ecc--cCCHHHHHHhcCEEEec
Confidence 999988875 4887863 333333333 3333221 1 13554 665 67899999999999999
Q ss_pred CCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhccC-CeEEECCCCHHHHHHHHHHHHcCCHHH
Q 003029 467 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA-GAILVNPWNITEVANAIARALNMSPEE 531 (856)
Q Consensus 467 S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~-~g~lVnP~d~~~lA~ai~~aL~~~~~e 531 (856)
|..||||++++||||| |.|+|+|+.+|..+.+++ ++++..+.+++++|++|.++++++...
T Consensus 274 s~~E~~~~~~lEAma~----G~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~~l~~~~~~~ 335 (358)
T cd03812 274 SLYEGLPLVLIEAQAS----GLPCILSDTITKEVDLTDLVKFLSLDESPEIWAEEILKLKSEDRRE 335 (358)
T ss_pred ccccCCCHHHHHHHHh----CCCEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHHHHHhCcchh
Confidence 9999999999999999 499999999999988844 455666667899999999999988633
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-20 Score=208.80 Aligned_cols=276 Identities=20% Similarity=0.202 Sum_probs=200.7
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCch--hhhhc---CcccHHHHHHhhcCCEEEEeCHHHHHHHHH
Q 003029 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS--EIHRT---LPSRSDLLRAVLAADLVGFHTYDYARHFVS 304 (856)
Q Consensus 230 ~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~--e~fr~---lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~ 304 (856)
...|+||+|.+..... +....++.+.+|-.+|.. ..+.. ...+......+..+|.+.+.+....+.+..
T Consensus 84 ~~~Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~ 157 (365)
T cd03809 84 LGLDLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLR 157 (365)
T ss_pred cCCCeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHH
Confidence 4569999998777665 456788999999755422 11110 111223344566889999888766655543
Q ss_pred HHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHH
Q 003029 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384 (856)
Q Consensus 305 ~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~A 384 (856)
. .+. ...++.++|+|+|...+..... +. ........++++|+++||+.+.||+..+++|
T Consensus 158 ~----~~~-----------~~~~~~vi~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~ 216 (365)
T cd03809 158 Y----LGV-----------PPDKIVVIPLGVDPRFRPPPAE-----AE-VLRALYLLPRPYFLYVGTIEPRKNLERLLEA 216 (365)
T ss_pred H----hCc-----------CHHHEEeeccccCccccCCCch-----HH-HHHHhcCCCCCeEEEeCCCccccCHHHHHHH
Confidence 1 111 2346889999999887754211 11 1111223578899999999999999999999
Q ss_pred HHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 003029 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (856)
Q Consensus 385 f~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v 464 (856)
+..+.+.+|+ +.|+++|.... .+......++ +. + ..+.+.+.|.++.+++..+|+.||+++
T Consensus 217 ~~~~~~~~~~----~~l~i~G~~~~----~~~~~~~~~~----~~----~---~~~~v~~~g~~~~~~~~~~~~~~d~~l 277 (365)
T cd03809 217 FARLPAKGPD----PKLVIVGKRGW----LNEELLARLR----EL----G---LGDRVRFLGYVSDEELAALYRGARAFV 277 (365)
T ss_pred HHHHHHhcCC----CCEEEecCCcc----ccHHHHHHHH----Hc----C---CCCeEEECCCCChhHHHHHHhhhhhhc
Confidence 9999988775 44777764321 1111222221 11 1 112344689999999999999999999
Q ss_pred ECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 003029 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (856)
Q Consensus 465 ~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~ 544 (856)
+||..||+|++++|||+|+ .|+|+|+.+|..+.++.+|++++|.|+++++++|.+++++ ++.+..+.+++++.+.
T Consensus 278 ~ps~~e~~~~~~~Ea~a~G----~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~ 352 (365)
T cd03809 278 FPSLYEGFGLPVLEAMACG----TPVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLLED-PALREELRERGLARAK 352 (365)
T ss_pred ccchhccCCCCHHHHhcCC----CcEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHH
Confidence 9999999999999999994 8999999988888777889999999999999999999875 4577788888888899
Q ss_pred hcCHHHHHHHHH
Q 003029 545 THTAQEWAETFV 556 (856)
Q Consensus 545 ~~~~~~W~~~fl 556 (856)
.++|+.+++.++
T Consensus 353 ~~sw~~~~~~~~ 364 (365)
T cd03809 353 RFSWEKTARRTL 364 (365)
T ss_pred hCCHHHHHHHHh
Confidence 999999998875
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.2e-20 Score=208.75 Aligned_cols=272 Identities=13% Similarity=0.090 Sum_probs=192.2
Q ss_pred CCCEEEEeCccchh-HHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHH-hhcCCEEEEeCHHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMF-LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFVSACTR 308 (856)
Q Consensus 231 ~~DvIwvHDyhl~l-lp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~-ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (856)
+.|+++.|-++... ...+++++....++....|......+.+ .+....+.+. +..+|.|.+.+....+.+..
T Consensus 127 ~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~--~~~~~~~~~~~~~~~d~ii~~S~~~~~~l~~---- 200 (407)
T cd04946 127 QGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRY--PSGYIPLRRYLLSSLDAVFPCSEQGRNYLQK---- 200 (407)
T ss_pred CceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhc--cccchHHHHHHHhcCCEEEECCHHHHHHHHH----
Confidence 45677766554433 3344566655556888888532111111 0111112222 45789999888766554432
Q ss_pred HhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHH
Q 003029 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (856)
Q Consensus 309 ~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~ 388 (856)
.++ ....++.++|+|+|...+.+.. ...+...|+++||+.+.||++.+++|+..+
T Consensus 201 ~~~-----------~~~~ki~vi~~gv~~~~~~~~~--------------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l 255 (407)
T cd04946 201 RYP-----------AYKEKIKVSYLGVSDPGIISKP--------------SKDDTLRIVSCSYLVPVKRVDLIIKALAAL 255 (407)
T ss_pred HCC-----------CccccEEEEECCcccccccCCC--------------CCCCCEEEEEeeccccccCHHHHHHHHHHH
Confidence 222 1245778999999987664320 013567899999999999999999999999
Q ss_pred HHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHH--ccEEEEC
Q 003029 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV--TDVALVT 466 (856)
Q Consensus 389 l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~--ADv~v~~ 466 (856)
.+.+|+.. +.++.+|. ++.... +++++.+.+. ...|. +.|.++.+++.++|+. ||+|+.|
T Consensus 256 ~~~~p~~~--l~~~iiG~-----g~~~~~----l~~~~~~~~~------~~~V~-f~G~v~~~e~~~~~~~~~~~v~v~~ 317 (407)
T cd04946 256 AKARPSIK--IKWTHIGG-----GPLEDT----LKELAESKPE------NISVN-FTGELSNSEVYKLYKENPVDVFVNL 317 (407)
T ss_pred HHhCCCce--EEEEEEeC-----chHHHH----HHHHHHhcCC------CceEE-EecCCChHHHHHHHhhcCCCEEEeC
Confidence 99888753 66776763 333333 3344332111 01255 5899999999999986 7899999
Q ss_pred CCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECC-CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 003029 467 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP-WNITEVANAIARALNMSPEEREKRHWHNFTHV 543 (856)
Q Consensus 467 S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP-~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v 543 (856)
|..||||++++|||||+ .|+|+|..+|..+.+ |.+|++++| .|++++|++|.+++++ ++++.++++++++++
T Consensus 318 S~~Eg~p~~llEAma~G----~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~-~~~~~~m~~~ar~~~ 392 (407)
T cd04946 318 SESEGLPVSIMEAMSFG----IPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFIDN-EEEYQTMREKAREKW 392 (407)
T ss_pred CccccccHHHHHHHHcC----CCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHH
Confidence 99999999999999994 899999999999988 446899987 4899999999999985 558888888888887
Q ss_pred -HhcCHHHHHHHHH
Q 003029 544 -TTHTAQEWAETFV 556 (856)
Q Consensus 544 -~~~~~~~W~~~fl 556 (856)
+.+++..+.++|+
T Consensus 393 ~~~f~~~~~~~~~~ 406 (407)
T cd04946 393 EENFNASKNYREFA 406 (407)
T ss_pred HHHcCHHHhHHHhc
Confidence 6789888888775
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.2e-20 Score=210.46 Aligned_cols=307 Identities=14% Similarity=0.126 Sum_probs=192.0
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCccc-HHH-----------------------HH--
Q 003029 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-SDL-----------------------LR-- 283 (856)
Q Consensus 230 ~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~-~~i-----------------------l~-- 283 (856)
.+.|++|.|||+.......+|+..++++.+|+.|- +++-|.|... ..+ ++
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHA----T~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~ 222 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHA----TLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERA 222 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecc----cccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHH
Confidence 46799999999999999999988899999999994 3444432110 000 11
Q ss_pred HhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCC----chHHHHHH----
Q 003029 284 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEIN----PVQVHIKE---- 355 (856)
Q Consensus 284 ~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~----~~~~~~~~---- 355 (856)
....||.+...+....+ .|..+ .++...+ |+|||||++.|.+..+.. ..++++..
T Consensus 223 aa~~Ad~fttVS~it~~----E~~~L------------l~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~ 285 (590)
T cd03793 223 AAHCAHVFTTVSEITAY----EAEHL------------LKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRG 285 (590)
T ss_pred HHhhCCEEEECChHHHH----HHHHH------------hCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHH
Confidence 12233333332221111 12222 2333223 999999999987542110 01122222
Q ss_pred -HHHHh---cCCceEEE-eecccc-cCChHHHHHHHHHHHHhCcC--ccCceEEEEEEcCCCCCh---------HHHHHH
Q 003029 356 -LQETF---AGRKVMLG-VDRLDM-IKGIPQKLLAFEKFLEENSD--WRGKVVLLQIAVPTRTDV---------PEYQRL 418 (856)
Q Consensus 356 -lr~~~---~~~~iIl~-V~Rld~-~KGi~~~L~Af~~~l~~~P~--~~~~v~Lv~v~~p~r~~~---------~~~~~l 418 (856)
++.++ .+++++++ +||+++ .||++.+|+|+.++-..--. -...|+-+ +..|+.... .-.++|
T Consensus 286 ~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvaf-ii~p~~~~~~~~~~l~g~~~~~~l 364 (590)
T cd03793 286 HFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAF-FIMPAKTNNFNVESLKGQAVRKQL 364 (590)
T ss_pred HHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEE-EEecCccCCcCHHhhcchHHHHHH
Confidence 34444 26788888 899999 99999999999988542111 11123333 334554331 223455
Q ss_pred HHHHHHHHHHhhcc--------------------------------------------------------------cC-C
Q 003029 419 TSQVHEIVGRINGR--------------------------------------------------------------FG-T 435 (856)
Q Consensus 419 ~~~l~~lv~~IN~~--------------------------------------------------------------~g-~ 435 (856)
++.++++..+|+.+ |. .
T Consensus 365 ~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~ 444 (590)
T cd03793 365 RDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSP 444 (590)
T ss_pred HHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCC
Confidence 66666655555444 00 0
Q ss_pred CCcccEEEeCCCCCH------HHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCch----hhcc--
Q 003029 436 LTAVPIHHLDRSLDF------PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA----QSLG-- 503 (856)
Q Consensus 436 ~~~~pV~~~~g~v~~------~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~----~~lg-- 503 (856)
.+...|+|...+++. .+...+|+.||+||+||++||||++++||||| |.|+|+|..+|.. +.++
T Consensus 445 ~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~----G~PvI~t~~~gf~~~v~E~v~~~ 520 (590)
T cd03793 445 EDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVM----GIPSITTNLSGFGCFMEEHIEDP 520 (590)
T ss_pred CCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHc----CCCEEEccCcchhhhhHHHhccC
Confidence 122345554444332 45788999999999999999999999999999 4999999999984 4443
Q ss_pred -CCeEEEC-------CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003029 504 -AGAILVN-------PWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 504 -~~g~lVn-------P~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (856)
..|+.|. +.+++++|++|.+.++++..++........+....++|.+-+..+++....+
T Consensus 521 ~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~A 587 (590)
T cd03793 521 ESYGIYIVDRRFKSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLA 587 (590)
T ss_pred CCceEEEecCCccchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 3578887 5678899999999997754333333333336667788888887777665443
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.7e-21 Score=205.00 Aligned_cols=218 Identities=15% Similarity=0.251 Sum_probs=141.1
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc-----eE
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL-----WL 664 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l-----gl 664 (856)
++|||++|+||||++. ...++++++++|++|.+ +|+.|+|+|||++..+.+.+..+++ ++
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~ 66 (270)
T PRK10513 2 AIKLIAIDMDGTLLLP--------------DHTISPAVKQAIAAARA-KGVNVVLTTGRPYAGVHRYLKELHMEQPGDYC 66 (270)
T ss_pred ceEEEEEecCCcCcCC--------------CCccCHHHHHHHHHHHH-CCCEEEEecCCChHHHHHHHHHhCCCCCCCeE
Confidence 4799999999999986 45699999999999986 7999999999999999999988753 58
Q ss_pred EeeCceEEEe--cCCe-eeecccccCChHHHHHHHHHHHHHHhc--------CCCcEEeeecce-----------EEEEe
Q 003029 665 AAENGMFLRC--TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTER--------TPRSHFEQRETS-----------LVWNY 722 (856)
Q Consensus 665 iaenG~~i~~--~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~r--------t~gs~ie~k~~s-----------i~~~y 722 (856)
|+.||++|.. +++. +... ++. +.+..+++...+. ..+.+...+... +...+
T Consensus 67 I~~NGa~i~~~~~~~~i~~~~----l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (270)
T PRK10513 67 ITNNGALVQKAADGETVAQTA----LSY---DDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVF 139 (270)
T ss_pred EEcCCeEEEECCCCCEEEecC----CCH---HHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccc
Confidence 9999999984 2332 3322 332 2333333332211 011111111000 00000
Q ss_pred ecC---Ch--hh------h-HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCC
Q 003029 723 KYA---DV--EF------G-RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTA 789 (856)
Q Consensus 723 ~~~---d~--e~------~-~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~ 789 (856)
... ++ .+ . .....++.+.+ ...+. ..+.++ ++..++||.|+|+|||.|+++|++++| ++
T Consensus 140 ~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~g------i~ 211 (270)
T PRK10513 140 REVEKMDPNLQFPKVMMIDEPEILDAAIARI-PAEVK-ERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLG------IK 211 (270)
T ss_pred cchhhccccCCceEEEEeCCHHHHHHHHHHh-HHHhc-CcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhC------CC
Confidence 000 00 00 0 01112222333 21111 235544 456799999999999999999999999 67
Q ss_pred cceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccC--CHHHHHHHHHHHH
Q 003029 790 IDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLR--MKMCMRFLSQNYL 842 (856)
Q Consensus 790 ~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~--~~~~~~~~l~~~~ 842 (856)
.++++|||| +.||++| |+.+ +.+|.++|.. | |-.. +-.-|.++|++++
T Consensus 212 ~~~v~afGD-~~NDi~M-l~~a---g~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 212 PEEVMAIGD-QENDIAM-IEYA---GVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HHHEEEECC-chhhHHH-HHhC---CceEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 899999999 9999999 8866 6799998852 2 3332 2345888887765
|
|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.5e-20 Score=202.67 Aligned_cols=278 Identities=17% Similarity=0.187 Sum_probs=187.5
Q ss_pred cCCCCEEEEeCccc-hhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHH------HHHhhcCCEEEEeCHHHHHH
Q 003029 229 YKDGDVVWCHDYHL-MFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL------LRAVLAADLVGFHTYDYARH 301 (856)
Q Consensus 229 ~~~~DvIwvHDyhl-~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~i------l~~ll~aDlIgf~t~~~~~~ 301 (856)
....|+|++|+... ...+.....+..+.++.+..|..++...... -+....+ ...+..+|.|.+.+......
T Consensus 85 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~ 163 (375)
T cd03821 85 IREADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPH-KALKKRLAWFLFERRLLQAAAAVHATSEQEAAE 163 (375)
T ss_pred CCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEcccccccccccc-chhhhHHHHHHHHHHHHhcCCEEEECCHHHHHH
Confidence 34679999998432 2222222222346788888887655432100 0011100 11233567777666433322
Q ss_pred HHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCCh
Q 003029 302 FVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGI 378 (856)
Q Consensus 302 Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi 378 (856)
... .+...++.++|+|+|.+.|.+... .. . ++.+ .++++|+++||+.+.||+
T Consensus 164 ~~~-----------------~~~~~~~~vi~~~~~~~~~~~~~~---~~----~-~~~~~~~~~~~~i~~~G~~~~~K~~ 218 (375)
T cd03821 164 IRR-----------------LGLKAPIAVIPNGVDIPPFAALPS---RG----R-RRKFPILPDKRIILFLGRLHPKKGL 218 (375)
T ss_pred HHh-----------------hCCcccEEEcCCCcChhccCcchh---hh----h-hhhccCCCCCcEEEEEeCcchhcCH
Confidence 211 122457889999999988764321 00 0 2222 467899999999999999
Q ss_pred HHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 003029 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (856)
Q Consensus 379 ~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~ 458 (856)
..+++|+..+.+++|++ .|+++|... +.+. ..++.++.+.+. . ..|. +.|.++.+++..+|+
T Consensus 219 ~~li~a~~~l~~~~~~~----~l~i~G~~~----~~~~---~~~~~~~~~~~~----~--~~v~-~~g~~~~~~~~~~~~ 280 (375)
T cd03821 219 DLLIEAFAKLAERFPDW----HLVIAGPDE----GGYR---AELKQIAAALGL----E--DRVT-FTGMLYGEDKAAALA 280 (375)
T ss_pred HHHHHHHHHhhhhcCCe----EEEEECCCC----cchH---HHHHHHHHhcCc----c--ceEE-EcCCCChHHHHHHHh
Confidence 99999999999887765 477776422 1121 222222222221 1 1254 589999999999999
Q ss_pred HccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhcc-CCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHH
Q 003029 459 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLG-AGAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (856)
Q Consensus 459 ~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg-~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~ 537 (856)
.||++++||..||||++++|||+|| .|+|+|+.+|..+.+. ..|+++ |.+.++++++|.++++++ +++..+.+
T Consensus 281 ~adv~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l~~~~-~~~~~~~~ 354 (375)
T cd03821 281 DADLFVLPSHSENFGIVVAEALACG----TPVVTTDKVPWQELIEYGCGWVV-DDDVDALAAALRRALELP-QRLKAMGE 354 (375)
T ss_pred hCCEEEeccccCCCCcHHHHHHhcC----CCEEEcCCCCHHHHhhcCceEEe-CCChHHHHHHHHHHHhCH-HHHHHHHH
Confidence 9999999999999999999999994 8999999999988883 345555 456699999999999987 57788888
Q ss_pred HHHHH-HHhcCHHHHHHHHH
Q 003029 538 HNFTH-VTTHTAQEWAETFV 556 (856)
Q Consensus 538 ~~~~~-v~~~~~~~W~~~fl 556 (856)
++++. .+.+++..-++.++
T Consensus 355 ~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 355 NGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHHHHhcCHHHHHHHhh
Confidence 88887 58888887777664
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.2e-20 Score=203.64 Aligned_cols=280 Identities=20% Similarity=0.162 Sum_probs=193.1
Q ss_pred CCCEEEEeCccch----hHHHHHH-hcCCCCeEEEEEecCCCchhhhhcCcccHHHH-HHhhcCCEEEEeCHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLM----FLPKCLK-EYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-RAVLAADLVGFHTYDYARHFVS 304 (856)
Q Consensus 231 ~~DvIwvHDyhl~----llp~~lr-~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il-~~ll~aDlIgf~t~~~~~~Fl~ 304 (856)
..|+|++|+++-. ......+ ....+.++.+.+|...+.... .....+. ..+..+|.|.+.+.+..+.+..
T Consensus 76 ~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~----~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 151 (366)
T cd03822 76 GPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPR----PGDRALLRLLLRRADAVIVMSSELLRALLL 151 (366)
T ss_pred CCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccc----hhhhHHHHHHHhcCCEEEEeeHHHHHHHHh
Confidence 4589999873321 1111111 123678999999986222111 1112222 2345789999887444444432
Q ss_pred HHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHH
Q 003029 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384 (856)
Q Consensus 305 ~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~A 384 (856)
. ....++.++|+|+|...+..... .+. .....++++|+++||+.+.||+..+++|
T Consensus 152 ~-----------------~~~~~~~~i~~~~~~~~~~~~~~-------~~~-~~~~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 152 R-----------------AYPEKIAVIPHGVPDPPAEPPES-------LKA-LGGLDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred h-----------------cCCCcEEEeCCCCcCcccCCchh-------hHh-hcCCCCCeEEEEEeeccCCCCHHHHHHH
Confidence 1 01357889999999876653210 111 1112467899999999999999999999
Q ss_pred HHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 003029 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (856)
Q Consensus 385 f~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v 464 (856)
++.+.+++|++ .|+++|.... ..........+++.+.+.. ..|.++.+.++.+++..+|+.||+++
T Consensus 207 ~~~~~~~~~~~----~l~i~G~~~~----~~~~~~~~~~~~i~~~~~~------~~v~~~~~~~~~~~~~~~~~~ad~~v 272 (366)
T cd03822 207 LPLLVAKHPDV----RLLVAGETHP----DLERYRGEAYALAERLGLA------DRVIFINRYLPDEELPELFSAADVVV 272 (366)
T ss_pred HHHHHhhCCCe----EEEEeccCcc----chhhhhhhhHhHHHhcCCC------CcEEEecCcCCHHHHHHHHhhcCEEE
Confidence 99998887764 4777764321 1111111100223332211 13666555599999999999999999
Q ss_pred ECCCCc--CCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 003029 465 VTSLRD--GMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (856)
Q Consensus 465 ~~S~~E--G~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~ 540 (856)
+||..| |++++++|||||| .|+|+|+.+| .+.+ +.+|+++++.|++++|++|.++++++ +.+.++.++.+
T Consensus 273 ~ps~~e~~~~~~~~~Ea~a~G----~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~-~~~~~~~~~~~ 346 (366)
T cd03822 273 LPYRSADQTQSGVLAYAIGFG----KPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADP-ELAQALRARAR 346 (366)
T ss_pred ecccccccccchHHHHHHHcC----CCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcCh-HHHHHHHHHHH
Confidence 999999 9999999999995 8999999988 6666 56799999999999999999999865 46777888889
Q ss_pred HHHHhcCHHHHHHHHHHHH
Q 003029 541 THVTTHTAQEWAETFVSEL 559 (856)
Q Consensus 541 ~~v~~~~~~~W~~~fl~~l 559 (856)
++++++++..+++.+++.+
T Consensus 347 ~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 347 EYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHhhCCHHHHHHHHHHHh
Confidence 9998899999999887654
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.2e-20 Score=208.58 Aligned_cols=275 Identities=20% Similarity=0.162 Sum_probs=190.4
Q ss_pred HHHHHHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCC-CchhhhhcCcc---cHHHHHHhhcCCEEEEeCH
Q 003029 221 FADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPF-PSSEIHRTLPS---RSDLLRAVLAADLVGFHTY 296 (856)
Q Consensus 221 fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~Pf-P~~e~fr~lp~---~~~il~~ll~aDlIgf~t~ 296 (856)
|.+++.. ..+.|+|++|..+.... .+.......++..++|... .....-...++ .+.++..+..+|.|.+.+.
T Consensus 90 ~l~~l~~-~~~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~ 166 (372)
T cd04949 90 FLDELNK-DTKPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATE 166 (372)
T ss_pred HHHHHhc-CCCCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccH
Confidence 3343433 46779999988776655 2223334556667777532 11100001111 2344555667899998887
Q ss_pred HHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccC
Q 003029 297 DYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIK 376 (856)
Q Consensus 297 ~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~K 376 (856)
...+.+.. .++ ...++.++|+|++...+.+.. .....+..|+++||+.+.|
T Consensus 167 ~~~~~l~~----~~~------------~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~~i~~vgrl~~~K 217 (372)
T cd04949 167 QQKQDLQK----QFG------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQRKPHKIITVARLAPEK 217 (372)
T ss_pred HHHHHHHH----HhC------------CCCceEEEcccccChhhcccc-------------hhhcCCCeEEEEEccCccc
Confidence 66555543 111 112378999999988765321 0123567899999999999
Q ss_pred ChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHH
Q 003029 377 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCAL 456 (856)
Q Consensus 377 Gi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~al 456 (856)
|+..+|+|+.++.+++|+++ |+++|.+ +....++ .++.+.+.. + .|. +.|. .+++..+
T Consensus 218 ~~~~li~a~~~l~~~~~~~~----l~i~G~g-----~~~~~~~----~~~~~~~~~----~--~v~-~~g~--~~~~~~~ 275 (372)
T cd04949 218 QLDQLIKAFAKVVKQVPDAT----LDIYGYG-----DEEEKLK----ELIEELGLE----D--YVF-LKGY--TRDLDEV 275 (372)
T ss_pred CHHHHHHHHHHHHHhCCCcE----EEEEEeC-----chHHHHH----HHHHHcCCc----c--eEE-EcCC--CCCHHHH
Confidence 99999999999999999854 7777643 2222232 333232221 1 244 4663 4679999
Q ss_pred HHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCC-Cchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHH
Q 003029 457 YAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA-GAAQSL--GAGAILVNPWNITEVANAIARALNMSPEERE 533 (856)
Q Consensus 457 y~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~a-G~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~ 533 (856)
|+.||++|+||..||||++++|||+|+ .|+|+|+.+ |..+.+ |.+|++++|.|++++|++|..+++++ +.+.
T Consensus 276 ~~~ad~~v~~S~~Eg~~~~~lEAma~G----~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~ 350 (372)
T cd04949 276 YQKAQLSLLTSQSEGFGLSLMEALSHG----LPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAIIELLNDP-KLLQ 350 (372)
T ss_pred HhhhhEEEecccccccChHHHHHHhCC----CCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHHHHHcCH-HHHH
Confidence 999999999999999999999999994 899999987 777777 67899999999999999999999976 4777
Q ss_pred HHHHHHHHHHHhcCHHHHHHH
Q 003029 534 KRHWHNFTHVTTHTAQEWAET 554 (856)
Q Consensus 534 ~r~~~~~~~v~~~~~~~W~~~ 554 (856)
++.+++++...++++..+++.
T Consensus 351 ~~~~~a~~~~~~~s~~~~~~~ 371 (372)
T cd04949 351 KFSEAAYENAERYSEENVWEK 371 (372)
T ss_pred HHHHHHHHHHHHhhHHHHHhc
Confidence 788888888888887776653
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.5e-21 Score=204.29 Aligned_cols=219 Identities=14% Similarity=0.210 Sum_probs=141.5
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEeeC
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliaen 668 (856)
+|||++|+||||+++ +..++++++++|++|.+ +|+.|+|+|||+...+.+.+..++ .++||.|
T Consensus 2 ikli~~DlDGTLl~~--------------~~~is~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 66 (266)
T PRK10976 2 YQVVASDLDGTLLSP--------------DHTLSPYAKETLKLLTA-RGIHFVFATGRHHVDVGQIRDNLEIKSYMITSN 66 (266)
T ss_pred ceEEEEeCCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcC
Confidence 589999999999987 35699999999999986 899999999999999999988885 4689999
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhc--------CC-CcEEeeecc------e---EEEEee---cCCh
Q 003029 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTER--------TP-RSHFEQRET------S---LVWNYK---YADV 727 (856)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~r--------t~-gs~ie~k~~------s---i~~~y~---~~d~ 727 (856)
|+.|...++.. +....++ .+.+.++++...+. .. +.++..... . ..+... ....
T Consensus 67 Ga~i~~~~~~~--i~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (266)
T PRK10976 67 GARVHDTDGNL--IFSHNLD---RDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEP 141 (266)
T ss_pred CcEEECCCCCE--ehhhcCC---HHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhccc
Confidence 99998522221 1112233 34445555433211 01 111110000 0 000000 0000
Q ss_pred -hh--------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEe
Q 003029 728 -EF--------GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (856)
Q Consensus 728 -e~--------~~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~G 797 (856)
.+ ......++.+.+ .+.+. ..+.++ .+..++||.|+++|||.|+++|++++| +++++|+|||
T Consensus 142 ~~i~ki~~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lg------i~~~~viafG 213 (266)
T PRK10976 142 DGVSKVFFTCDSHEKLLPLEQAI-NARWG-DRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLG------YSLKDCIAFG 213 (266)
T ss_pred CCceEEEEEcCCHHHHHHHHHHH-HHHhC-CcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcC------CCHHHeEEEc
Confidence 00 001112222333 21111 235544 456799999999999999999999999 6789999999
Q ss_pred cCCcccccccccccccCcceEEeCCCC------c-c-c-cC--CHHHHHHHHHHHH
Q 003029 798 HFLGKNCNLPLQFLMQTISTVRLDSSF------L-H-Y-LR--MKMCMRFLSQNYL 842 (856)
Q Consensus 798 D~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~-~-l~--~~~~~~~~l~~~~ 842 (856)
| +.||++| |+++ +.+|.++|.. + + + .+ +-.-|.+.|++++
T Consensus 214 D-~~NDi~M-l~~a---g~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 214 D-GMNDAEM-LSMA---GKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred C-CcccHHH-HHHc---CCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 9 9999999 8876 6789998862 1 1 2 22 2345888888876
|
|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.3e-20 Score=209.88 Aligned_cols=187 Identities=15% Similarity=0.057 Sum_probs=131.1
Q ss_pred EEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecc--cccCChHHHHHHHHHHHHhCcCccCceEEEE
Q 003029 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL--DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (856)
Q Consensus 326 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rl--d~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~ 403 (856)
.++.++|||||++.+....... ..+ ...++++|++|+|. ++.||+..+|+|+..+ .+ ++.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~~~~~-------~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAELP-------PVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHT 276 (405)
T ss_pred CCEEEeCCCcCccccccccccc-------ccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEE
Confidence 4788999999975432211100 001 12467899999994 4789999999999875 23 356887
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCC-CCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhh
Q 003029 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS-LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (856)
Q Consensus 404 v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~-v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~ 482 (856)
+|.+. +.. . ..|.+ .|. .+.+++..+|+.||+||+||..||||+|++|||||
T Consensus 277 vG~g~----~~~-------~---------------~~v~~-~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~ 329 (405)
T PRK10125 277 FGKFS----PFT-------A---------------GNVVN-HGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSI 329 (405)
T ss_pred EcCCC----ccc-------c---------------cceEE-ecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHc
Confidence 87421 100 0 02444 343 36789999999999999999999999999999999
Q ss_pred cCCCCceEEEeCCCCchhhc-cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Q 003029 483 QDLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELN 560 (856)
Q Consensus 483 ~~~~~g~lVlSe~aG~~~~l-g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~ 560 (856)
+ .|||+|+.+|+.+.+ +.+|++|+|.|++++|+++...+... ........+++.+ ..+++..-++++++-++
T Consensus 330 G----~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 330 G----VPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQ 403 (405)
T ss_pred C----CCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 4 999999999998888 44799999999999998653322110 0001123355554 56898888888877654
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-20 Score=203.74 Aligned_cols=213 Identities=15% Similarity=0.139 Sum_probs=141.1
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc---eEEe
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL---WLAA 666 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l---glia 666 (856)
.+++|++|+||||+++ ...++++++++|++|.+ +|+.|+|+|||+...+.+.+..+++ ++|+
T Consensus 6 ~~~lI~~DlDGTLL~~--------------~~~i~~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~ 70 (271)
T PRK03669 6 DPLLIFTDLDGTLLDS--------------HTYDWQPAAPWLTRLRE-AQVPVILCSSKTAAEMLPLQQTLGLQGLPLIA 70 (271)
T ss_pred CCeEEEEeCccCCcCC--------------CCcCcHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEE
Confidence 5799999999999986 34578999999999986 7999999999999999999998854 5999
Q ss_pred eCceEEEecCC-e----eeecccccCChHHHHHHHHHHHHHHhcCCCcEE--eee-----------------------cc
Q 003029 667 ENGMFLRCTTG-K----WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF--EQR-----------------------ET 716 (856)
Q Consensus 667 enG~~i~~~~~-~----w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~i--e~k-----------------------~~ 716 (856)
+||+.|..... . + ......++ .+.+.++++..... .+..+ ... ..
T Consensus 71 ~NGa~I~~~~~~~~~~~~-~~~~~~l~---~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (271)
T PRK03669 71 ENGAVIQLDEQWQDHPDF-PRIISGIS---HGEIRQVLNTLREK-EGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEA 145 (271)
T ss_pred eCCCEEEecCcccCCCCc-eEeecCCC---HHHHHHHHHHHHHh-cCCceeecccCCHHHHHHHhCCCHHHHHHHhcccc
Confidence 99999985321 1 1 01111233 34455555443221 01000 000 00
Q ss_pred eEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCC---CcceE
Q 003029 717 SLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKT---AIDYV 793 (856)
Q Consensus 717 si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~---~~d~v 793 (856)
...+.+.. ++ .+..++.+.+ .. ..+.++.+..++||+|+++|||+|+++|++++| + +.++|
T Consensus 146 ~~~~~~~~-~~----~~~~~~~~~l-~~----~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~lg------i~~~~~~~v 209 (271)
T PRK03669 146 SVTLIWRD-SD----ERMAQFTARL-AE----LGLQFVQGARFWHVLDASAGKDQAANWLIATYQ------QLSGTRPTT 209 (271)
T ss_pred CceeEecC-CH----HHHHHHHHHH-HH----CCCEEEecCeeEEEecCCCCHHHHHHHHHHHHH------hhcCCCceE
Confidence 00001100 11 1223344444 22 145666666799999999999999999999999 6 68999
Q ss_pred EEEecCCcccccccccccccCcceEEeCCCC------------c-cc--cCCHHHHHHHHHHHHH
Q 003029 794 LCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------------L-HY--LRMKMCMRFLSQNYLM 843 (856)
Q Consensus 794 la~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------------~-~~--l~~~~~~~~~l~~~~~ 843 (856)
+|||| +.||++| |+++ +.+|.+++.. + |. -...+-+.+-|+.++.
T Consensus 210 iafGD-s~NDi~M-l~~a---g~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~ 269 (271)
T PRK03669 210 LGLGD-GPNDAPL-LDVM---DYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDHFFS 269 (271)
T ss_pred EEEcC-CHHHHHH-HHhC---CEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHHHHh
Confidence 99999 9999999 8876 5677776311 1 32 2344467777777664
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-20 Score=196.99 Aligned_cols=208 Identities=11% Similarity=0.155 Sum_probs=136.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEee
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAE 667 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliae 667 (856)
.+|+|++|+||||++. +..++++++++|++|.+ +|+.|+|+|||+...+.+++..++ .++|++
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~ 66 (230)
T PRK01158 2 KIKAIAIDIDGTITDK--------------DRRLSLKAVEAIRKAEK-LGIPVILATGNVLCFARAAAKLIGTSGPVIAE 66 (230)
T ss_pred ceeEEEEecCCCcCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCcEEEe
Confidence 3689999999999986 34689999999999985 799999999999999998888874 479999
Q ss_pred CceEEEec--CCe-eeecccccCChHHHHHHHHHHHHHHhcCCCc--EEeee--c--ceEEEEeecCChhhhHHHHHHHH
Q 003029 668 NGMFLRCT--TGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRS--HFEQR--E--TSLVWNYKYADVEFGRIQARDML 738 (856)
Q Consensus 668 nG~~i~~~--~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs--~ie~k--~--~si~~~y~~~d~e~~~~qa~el~ 738 (856)
||+++... ++. +... .+ .+..+++......+.. .+... . ......+.... . .++.
T Consensus 67 nGa~i~~~~~~~~~~~~~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~ 130 (230)
T PRK01158 67 NGGVISVGFDGKRIFLGD----IE-----ECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVP----V---EEVR 130 (230)
T ss_pred cCeEEEEcCCCCEEEEcc----hH-----HHHHHHHHHHHhccccceeeecCCcccccceeeeccccc----H---HHHH
Confidence 99999853 222 2221 11 1222232222111111 11100 0 00001111111 1 1222
Q ss_pred HHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceE
Q 003029 739 QHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTV 818 (856)
Q Consensus 739 ~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v 818 (856)
+.+ +.. ...+.++.+..++||.++++|||.|+++++++++ ++++++++||| +.||++| |+.+ +.+|
T Consensus 131 ~~l-~~~--~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~------i~~~~~i~~GD-~~NDi~m-~~~a---g~~v 196 (230)
T PRK01158 131 ELL-EEL--GLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMG------IDPEEVAAIGD-SENDLEM-FEVA---GFGV 196 (230)
T ss_pred HHH-HHc--CCcEEEEecceEEEEeeCCCChHHHHHHHHHHhC------CCHHHEEEECC-chhhHHH-HHhc---CceE
Confidence 222 221 1245556666789999999999999999999999 67899999999 9999999 8866 7788
Q ss_pred EeCCCC------c-cccCC--HHHHHHHHHHHH
Q 003029 819 RLDSSF------L-HYLRM--KMCMRFLSQNYL 842 (856)
Q Consensus 819 ~V~~~~------~-~~l~~--~~~~~~~l~~~~ 842 (856)
.++|.. + |-..+ ..-|.+.|++++
T Consensus 197 am~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 197 AVANADEELKEAADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred EecCccHHHHHhcceEecCCCcChHHHHHHHHh
Confidence 898752 2 43332 233667776654
|
|
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-19 Score=197.88 Aligned_cols=266 Identities=19% Similarity=0.164 Sum_probs=192.6
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (856)
..|+|++|..+...+..++..+....++.+.+|.+..... +....+...+..+|.+...+....+.+.+ ..
T Consensus 79 ~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~vi~~s~~~~~~l~~----~~ 149 (355)
T cd03799 79 GIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS-----PDAIDLDEKLARADFVVAISEYNRQQLIR----LL 149 (355)
T ss_pred CCCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc-----CchHHHHHHHhhCCEEEECCHHHHHHHHH----hc
Confidence 4699999987665555555555557888888886422111 11122334455799999988876665543 11
Q ss_pred CcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHH
Q 003029 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (856)
Q Consensus 311 g~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~ 390 (856)
+ ....++.++|+|+|.+.|.+.. .....++..|+++||+.+.||++.+++|++.+.+
T Consensus 150 ~-----------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~ 206 (355)
T cd03799 150 G-----------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYLLEALALLKD 206 (355)
T ss_pred C-----------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHHHHHHHHHhh
Confidence 1 1345789999999998875431 0112456789999999999999999999999887
Q ss_pred hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC-
Q 003029 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR- 469 (856)
Q Consensus 391 ~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~- 469 (856)
..|+ +.|+++|.. +.. .++.+.+.+.+. .+.+.+.|.++.+++..+|+.||++++||..
T Consensus 207 ~~~~----~~l~i~G~~-----~~~----~~~~~~~~~~~~-------~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~ 266 (355)
T cd03799 207 RGID----FRLDIVGDG-----PLR----DELEALIAELGL-------EDRVTLLGAKSQEEVRELLRAADLFVLPSVTA 266 (355)
T ss_pred cCCC----eEEEEEECC-----ccH----HHHHHHHHHcCC-------CCeEEECCcCChHHHHHHHHhCCEEEecceec
Confidence 7665 457777642 222 233334433321 1233458999999999999999999999999
Q ss_pred -----cCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 003029 470 -----DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (856)
Q Consensus 470 -----EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~ 542 (856)
||||++++|||+|+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++++. ++..+.+++++.
T Consensus 267 ~~~~~e~~~~~~~Ea~a~G----~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~-~~~~~~~~a~~~ 341 (355)
T cd03799 267 ADGDREGLPVVLMEAMAMG----LPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDPE-LRREMGEAGRAR 341 (355)
T ss_pred CCCCccCccHHHHHHHHcC----CCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHH
Confidence 99999999999994 899999998888777 347999999999999999999998764 577777788877
Q ss_pred H-HhcCHHHHHH
Q 003029 543 V-TTHTAQEWAE 553 (856)
Q Consensus 543 v-~~~~~~~W~~ 553 (856)
+ ..|++...++
T Consensus 342 ~~~~~s~~~~~~ 353 (355)
T cd03799 342 VEEEFDIRKQAA 353 (355)
T ss_pred HHHhcCHHHHhh
Confidence 7 4577666554
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-19 Score=195.22 Aligned_cols=279 Identities=22% Similarity=0.188 Sum_probs=201.9
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhh----cCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR----TLPSRSDLLRAVLAADLVGFHTYDYARHFVSAC 306 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr----~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~ 306 (856)
..|+|++|+++...+.. +.....+.++.+.+|.+++...... ...........+..+|.+.+.+....+.+.+.
T Consensus 85 ~~Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~- 162 (374)
T cd03801 85 RFDVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELREL- 162 (374)
T ss_pred CCcEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhc-
Confidence 46999999999887765 3444568899999999876432110 00111122233556788888887666555431
Q ss_pred HHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHH---hcCCceEEEeecccccCChHHHHH
Q 003029 307 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQET---FAGRKVMLGVDRLDMIKGIPQKLL 383 (856)
Q Consensus 307 ~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~---~~~~~iIl~V~Rld~~KGi~~~L~ 383 (856)
+.....++.++|+|+|...+.+.. ...+.. ..+++.|+++||+.+.||+..+++
T Consensus 163 --------------~~~~~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~ 219 (374)
T cd03801 163 --------------GGVPPEKITVIPNGVDTERFRPAP---------RAARRRLGIPEDEPVILFVGRLVPRKGVDLLLE 219 (374)
T ss_pred --------------CCCCCCcEEEecCcccccccCccc---------hHHHhhcCCcCCCeEEEEecchhhhcCHHHHHH
Confidence 001125789999999988775321 111111 235688999999999999999999
Q ss_pred HHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 003029 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (856)
Q Consensus 384 Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~ 463 (856)
|+..+.+++|+ +.|+++|. ++....+++ ++.+.+.. ..|. +.|.++.+++..+|+.||++
T Consensus 220 ~~~~~~~~~~~----~~l~i~G~-----~~~~~~~~~----~~~~~~~~------~~v~-~~g~~~~~~~~~~~~~~di~ 279 (374)
T cd03801 220 ALAKLRKEYPD----VRLVIVGD-----GPLREELEA----LAAELGLG------DRVT-FLGFVPDEDLPALYAAADVF 279 (374)
T ss_pred HHHHHhhhcCC----eEEEEEeC-----cHHHHHHHH----HHHHhCCC------cceE-EEeccChhhHHHHHHhcCEE
Confidence 99999887765 45777762 233333333 33222211 1355 58999999999999999999
Q ss_pred EECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHH-
Q 003029 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF- 540 (856)
Q Consensus 464 v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~- 540 (856)
++||..||+|++++|||+|+ .|+|+|..+|..+.+ +.+|+++++.|+++++++|.++++++. .+.++.++++
T Consensus 280 i~~~~~~~~~~~~~Ea~~~g----~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~-~~~~~~~~~~~ 354 (374)
T cd03801 280 VLPSLYEGFGLVLLEAMAAG----LPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPE-LRRRLGEAARE 354 (374)
T ss_pred EecchhccccchHHHHHHcC----CcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChH-HHHHHHHHHHH
Confidence 99999999999999999994 899999999998888 467999999999999999999998764 6666677766
Q ss_pred HHHHhcCHHHHHHHHHHHH
Q 003029 541 THVTTHTAQEWAETFVSEL 559 (856)
Q Consensus 541 ~~v~~~~~~~W~~~fl~~l 559 (856)
...+.+++..+++.+++.+
T Consensus 355 ~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 355 RVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHhcCHHHHHHHHHHhh
Confidence 4568899999999887654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.2e-19 Score=197.05 Aligned_cols=279 Identities=20% Similarity=0.178 Sum_probs=193.8
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCc-ccHHHHHH-hhcCCEEEEeCHHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP-SRSDLLRA-VLAADLVGFHTYDYARHFVSACTR 308 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp-~~~~il~~-ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (856)
..|+|++|+++...............++.+..|..++... ...+ ....+..- ...+|.+...+......+..
T Consensus 80 ~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~---- 153 (365)
T cd03807 80 RPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG--KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQA---- 153 (365)
T ss_pred CCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc--chhHhHHHHHHHHhccccCeEEeccHHHHHHHHH----
Confidence 4699999999987777776665467889999988654421 0001 11111111 12456665555443333321
Q ss_pred HhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHHHHHHH
Q 003029 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAF 385 (856)
Q Consensus 309 ~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~~L~Af 385 (856)
. +. ...++.++|+|+|...|.+... ....+++++ .++++|+++||+.+.||++.+++|+
T Consensus 154 ~-~~-----------~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~ 215 (365)
T cd03807 154 I-GY-----------PPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQKDHATLLRAA 215 (365)
T ss_pred c-CC-----------ChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHH
Confidence 0 11 2346788999999987764321 112233344 3567899999999999999999999
Q ss_pred HHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEE
Q 003029 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 465 (856)
Q Consensus 386 ~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~ 465 (856)
..+.+++|++ .|+++|.+. ....++.... ... +.. ..|.+ .+. .+++..+|+.||++++
T Consensus 216 ~~l~~~~~~~----~l~i~G~~~-----~~~~~~~~~~---~~~----~~~--~~v~~-~g~--~~~~~~~~~~adi~v~ 274 (365)
T cd03807 216 ALLLKKFPNA----RLLLVGDGP-----DRANLELLAL---KEL----GLE--DKVIL-LGE--RSDVPALLNALDVFVL 274 (365)
T ss_pred HHHHHhCCCe----EEEEecCCc-----chhHHHHHHH---Hhc----CCC--ceEEE-ccc--cccHHHHHHhCCEEEe
Confidence 9998887764 477776432 1111221111 121 111 12444 554 4689999999999999
Q ss_pred CCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-
Q 003029 466 TSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT- 544 (856)
Q Consensus 466 ~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~- 544 (856)
||..||+|++++|||+|+ .|+|+|+.+|..+.+..+|+++++.|+++++++|.++++++ +++.++.+++++++.
T Consensus 275 ps~~e~~~~~~~Ea~a~g----~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~ 349 (365)
T cd03807 275 SSLSEGFPNVLLEAMACG----LPVVATDVGDNAELVGDTGFLVPPGDPEALAEAIEALLADP-ALRQALGEAARERIEE 349 (365)
T ss_pred CCccccCCcHHHHHHhcC----CCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHH
Confidence 999999999999999994 89999999999888855899999999999999999999976 477777788888874
Q ss_pred hcCHHHHHHHHHHHH
Q 003029 545 THTAQEWAETFVSEL 559 (856)
Q Consensus 545 ~~~~~~W~~~fl~~l 559 (856)
.+++..-++.+++.+
T Consensus 350 ~~s~~~~~~~~~~~y 364 (365)
T cd03807 350 NFSIEAMVEAYEELY 364 (365)
T ss_pred hCCHHHHHHHHHHHh
Confidence 588888888877643
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.8e-19 Score=197.27 Aligned_cols=272 Identities=20% Similarity=0.195 Sum_probs=189.3
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccH---------HHH-HHhhcCCEEEEeCHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRS---------DLL-RAVLAADLVGFHTYDYAR 300 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~---------~il-~~ll~aDlIgf~t~~~~~ 300 (856)
..|+|++|+............+..+.++.+.+|.+++.. ....+... .+. ..+..+|.|.+.+.....
T Consensus 84 ~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 161 (374)
T cd03817 84 GPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDY--THYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIAD 161 (374)
T ss_pred CCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHH--HHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHH
Confidence 458999998754433333333345788999999887532 21111110 111 224468888887775444
Q ss_pred HHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCC
Q 003029 301 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKG 377 (856)
Q Consensus 301 ~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KG 377 (856)
.+.. . +...++.++|+|+|...|.+... .. .++.+ .+++.|+++||+.+.||
T Consensus 162 ~~~~-----~------------~~~~~~~vi~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~~i~~~G~~~~~k~ 216 (374)
T cd03817 162 LLRE-----Y------------GVKRPIEVIPTGIDLDRFEPVDG----DD----ERRKLGIPEDEPVLLYVGRLAKEKN 216 (374)
T ss_pred HHHh-----c------------CCCCceEEcCCccchhccCccch----hH----HHHhcCCCCCCeEEEEEeeeecccC
Confidence 3321 1 12235889999999987764321 11 12222 35678999999999999
Q ss_pred hHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHH
Q 003029 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 457 (856)
Q Consensus 378 i~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly 457 (856)
++.+++|+..+.++.|+ +.|+++|. ++.. ..+++++.+.+.. ..|. +.|.++.+++..+|
T Consensus 217 ~~~l~~~~~~~~~~~~~----~~l~i~G~-----~~~~----~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~~~ 276 (374)
T cd03817 217 IDFLIRAFARLLKEEPD----VKLVIVGD-----GPER----EELEELARELGLA------DRVI-FTGFVPREELPDYY 276 (374)
T ss_pred HHHHHHHHHHHHHhCCC----eEEEEEeC-----CchH----HHHHHHHHHcCCC------CcEE-EeccCChHHHHHHH
Confidence 99999999999887665 45777763 2222 2334444333221 1244 58999999999999
Q ss_pred HHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHH
Q 003029 458 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKR 535 (856)
Q Consensus 458 ~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r 535 (856)
+.||++++||..||+|++++|||+|+ .|+|+|..+|..+.+ +.+|+++++.|. +++++|.++++++. .+.++
T Consensus 277 ~~ad~~l~~s~~e~~~~~~~Ea~~~g----~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~-~~~~~ 350 (374)
T cd03817 277 KAADLFVFASTTETQGLVLLEAMAAG----LPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPE-LRRRL 350 (374)
T ss_pred HHcCEEEecccccCcChHHHHHHHcC----CcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChH-HHHHH
Confidence 99999999999999999999999994 899999999988887 468999999888 99999999999765 55677
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHH
Q 003029 536 HWHNFTHVTTHTAQEWAETFVSE 558 (856)
Q Consensus 536 ~~~~~~~v~~~~~~~W~~~fl~~ 558 (856)
.++.++.+.+++ |++.+.+-
T Consensus 351 ~~~~~~~~~~~~---~~~~~~~~ 370 (374)
T cd03817 351 SKNAEESAEKFS---FAKKVEKL 370 (374)
T ss_pred HHHHHHHHHHHH---HHHHHHHH
Confidence 788888887765 44444433
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.1e-19 Score=196.48 Aligned_cols=280 Identities=18% Similarity=0.161 Sum_probs=198.1
Q ss_pred cCCCCEEEEeC-ccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcC-cc-------cHHHH-HHhhcCCEEEEeCHHH
Q 003029 229 YKDGDVVWCHD-YHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL-PS-------RSDLL-RAVLAADLVGFHTYDY 298 (856)
Q Consensus 229 ~~~~DvIwvHD-yhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~l-p~-------~~~il-~~ll~aDlIgf~t~~~ 298 (856)
....|+|++|. ..+..++........+.++.+.+|..+|........ .. ...+. ..+..+|.+.+.+...
T Consensus 97 ~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~ 176 (394)
T cd03794 97 RRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGM 176 (394)
T ss_pred ccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHH
Confidence 34579999998 344444444444455789999999887754321111 11 11111 2345789999999877
Q ss_pred HHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCCh
Q 003029 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGI 378 (856)
Q Consensus 299 ~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi 378 (856)
.+.+.. .+ ....++.++|+|+|...+.+..... ..... ....++.+|+++||+.+.||+
T Consensus 177 ~~~~~~-----~~-----------~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~i~~~G~~~~~k~~ 235 (394)
T cd03794 177 REYLVR-----RG-----------VPPEKISVIPNGVDLELFKPPPADE----SLRKE-LGLDDKFVVLYAGNIGRAQGL 235 (394)
T ss_pred HHHHHh-----cC-----------CCcCceEEcCCCCCHHHcCCccchh----hhhhc-cCCCCcEEEEEecCcccccCH
Confidence 766541 11 1245788999999998776432110 01110 112467899999999999999
Q ss_pred HHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 003029 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (856)
Q Consensus 379 ~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~ 458 (856)
..+++|+..+.+. |+ +.|+++|. ++....+++. +... ....|.+ .|.++.+++..+|+
T Consensus 236 ~~l~~~~~~l~~~-~~----~~l~i~G~-----~~~~~~~~~~----~~~~-------~~~~v~~-~g~~~~~~~~~~~~ 293 (394)
T cd03794 236 DTLLEAAALLKDR-PD----IRFLIVGD-----GPEKEELKEL----AKAL-------GLDNVTF-LGRVPKEELPELLA 293 (394)
T ss_pred HHHHHHHHHHhhc-CC----eEEEEeCC-----cccHHHHHHH----HHHc-------CCCcEEE-eCCCChHHHHHHHH
Confidence 9999999998766 55 45777753 2333233322 2111 1224665 67999999999999
Q ss_pred HccEEEECCCCcCC-----ChhHHHHHhhcCCCCceEEEeCCCCchhhcc--CCeEEECCCCHHHHHHHHHHHHcCCHHH
Q 003029 459 VTDVALVTSLRDGM-----NLVSYEFVACQDLKKGVLILSEFAGAAQSLG--AGAILVNPWNITEVANAIARALNMSPEE 531 (856)
Q Consensus 459 ~ADv~v~~S~~EG~-----~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg--~~g~lVnP~d~~~lA~ai~~aL~~~~~e 531 (856)
.||++++||..|++ +++++|||+| |.|+|+|+.+|..+.+. .+|+++++.|+++++++|.++++++ ++
T Consensus 294 ~~di~i~~~~~~~~~~~~~p~~~~Ea~~~----G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~ 368 (394)
T cd03794 294 AADVGLVPLKPGPAFEGVSPSKLFEYMAA----GKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDP-EE 368 (394)
T ss_pred hhCeeEEeccCcccccccCchHHHHHHHC----CCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhCh-HH
Confidence 99999999999876 6678999999 48999999999998883 4799999999999999999999654 57
Q ss_pred HHHHHHHHHHHHH-hcCHHHHHHHHH
Q 003029 532 REKRHWHNFTHVT-THTAQEWAETFV 556 (856)
Q Consensus 532 r~~r~~~~~~~v~-~~~~~~W~~~fl 556 (856)
+.++.+++++++. .++++.+++.++
T Consensus 369 ~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 369 RAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 7888888888886 899999888763
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.7e-20 Score=194.91 Aligned_cols=204 Identities=17% Similarity=0.199 Sum_probs=129.6
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc--C--ceE
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--N--LWL 664 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l--~--lgl 664 (856)
++.|||++|+||||+++ +.+++++++++|++|.+ +|++|+|+|||++..+.+.++.. . .++
T Consensus 3 ~~~klia~DlDGTLL~~--------------~~~is~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~ 67 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKP--------------RNPITQEMKDTLAKLKS-KGFKIGVVGGSDYPKIKEQLGEDVLEDFDYV 67 (247)
T ss_pred CCCeEEEEECcCCCcCC--------------CCCCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHhhhhhcccCeE
Confidence 56899999999999987 46799999999999986 79999999999999999888743 2 368
Q ss_pred EeeCceEEEecCCe-eeecccccCChHHHHHHHHHHHHHH-----hcCCCcEEeeecceEEEEee--cCCh----hhh--
Q 003029 665 AAENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFT-----ERTPRSHFEQRETSLVWNYK--YADV----EFG-- 730 (856)
Q Consensus 665 iaenG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~-----~rt~gs~ie~k~~si~~~y~--~~d~----e~~-- 730 (856)
|+.||++|...++. +...++..++.++...+.++++.+. ....+.+++.........+. .... ++.
T Consensus 68 I~~NGa~I~~~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (247)
T PTZ00174 68 FSENGLVAYKDGELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKY 147 (247)
T ss_pred EeCCceEEEECCeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhc
Confidence 99999999864333 2222211234444455555443321 01122333322111111110 0000 000
Q ss_pred ---HHHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecC---Cccc
Q 003029 731 ---RIQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGKN 803 (856)
Q Consensus 731 ---~~qa~el~~~L~~~~~~~~~v~v~~-g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~---~~nD 803 (856)
.....++.+.+ ...+....+.... +..++||.|+|+|||.|++.|+++ .++|+||||. +.||
T Consensus 148 ~~~~~~~~~~~~~l-~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~----------~~eviafGD~~~~~~ND 216 (247)
T PTZ00174 148 DKEHHIREKFIQDL-KKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND----------FKEIHFFGDKTFEGGND 216 (247)
T ss_pred CCcchHHHHHHHHH-HHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh----------hhhEEEEcccCCCCCCc
Confidence 00112344444 3323322333333 347999999999999999999987 3689999993 4799
Q ss_pred ccccccccccCcceEE
Q 003029 804 CNLPLQFLMQTISTVR 819 (856)
Q Consensus 804 e~M~f~~~~~~~~~v~ 819 (856)
++| |++++-.|.+|.
T Consensus 217 ieM-l~~~~~~g~~v~ 231 (247)
T PTZ00174 217 YEI-YNDPRTIGHSVK 231 (247)
T ss_pred Hhh-hhcCCCceEEeC
Confidence 999 998765555554
|
|
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.6e-19 Score=201.06 Aligned_cols=268 Identities=14% Similarity=0.115 Sum_probs=177.3
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhc-CCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHH
Q 003029 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFV 303 (856)
Q Consensus 225 i~~~~~~~DvIwvHDyhl~llp~~lr~~-~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl 303 (856)
+++..+ .|+||+|+.....+..++++. ....++..+.|..++....+. ...+..+|.+...+..-.+.+.
T Consensus 79 ~l~~~~-~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~~~ 149 (359)
T PRK09922 79 WLKETQ-PDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQMM 149 (359)
T ss_pred HHHhcC-CCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHHHH
Confidence 333344 599999998776666666553 233455666676543321111 1223578888877765544443
Q ss_pred HHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeeccc--ccCChHHH
Q 003029 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLD--MIKGIPQK 381 (856)
Q Consensus 304 ~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld--~~KGi~~~ 381 (856)
. .+. ...++.++|+|||.+.+.... ++ ..++++|+++||+. +.||+..+
T Consensus 150 ~-----~~~-----------~~~ki~vi~N~id~~~~~~~~--~~-----------~~~~~~i~~~Grl~~~~~k~~~~l 200 (359)
T PRK09922 150 A-----RGI-----------SAQRISVIYNPVEIKTIIIPP--PE-----------RDKPAVFLYVGRLKFEGQKNVKEL 200 (359)
T ss_pred H-----cCC-----------CHHHEEEEcCCCCHHHccCCC--cc-----------cCCCcEEEEEEEEecccCcCHHHH
Confidence 1 121 134688899999976653211 10 13467899999996 45999999
Q ss_pred HHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCC--CHHHHHHHHHH
Q 003029 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL--DFPALCALYAV 459 (856)
Q Consensus 382 L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v--~~~el~aly~~ 459 (856)
++|+..+. + ++.|+++|. +++.+. +++++.+.|.. ..|+ |.|.+ +.+++..+|+.
T Consensus 201 ~~a~~~~~---~----~~~l~ivG~-----g~~~~~----l~~~~~~~~l~------~~v~-f~G~~~~~~~~~~~~~~~ 257 (359)
T PRK09922 201 FDGLSQTT---G----EWQLHIIGD-----GSDFEK----CKAYSRELGIE------QRII-WHGWQSQPWEVVQQKIKN 257 (359)
T ss_pred HHHHHhhC---C----CeEEEEEeC-----CccHHH----HHHHHHHcCCC------CeEE-EecccCCcHHHHHHHHhc
Confidence 99998762 2 366888863 333333 44444443321 1255 47766 45899999999
Q ss_pred ccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeC-CCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHH
Q 003029 460 TDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRH 536 (856)
Q Consensus 460 ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe-~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~ 536 (856)
||++|+||..||||++++|||||+ .|+|+|+ .+|..+.+ |.+|++|+|.|++++|++|.++++.+. .| ..
T Consensus 258 ~d~~v~~s~~Egf~~~~lEAma~G----~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~-~~--~~ 330 (359)
T PRK09922 258 VSALLLTSKFEGFPMTLLEAMSYG----IPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEV-KY--QH 330 (359)
T ss_pred CcEEEECCcccCcChHHHHHHHcC----CCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCcc-cC--CH
Confidence 999999999999999999999994 8999999 88888877 568999999999999999999998774 21 11
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHH
Q 003029 537 WHNFTHVTTHTAQEWAETFVSELN 560 (856)
Q Consensus 537 ~~~~~~v~~~~~~~W~~~fl~~l~ 560 (856)
....+.+.++..+.-..++...+.
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~ 354 (359)
T PRK09922 331 DAIPNSIERFYEVLYFKNLNNALF 354 (359)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHH
Confidence 222333444444444444444443
|
|
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.4e-19 Score=193.37 Aligned_cols=282 Identities=23% Similarity=0.216 Sum_probs=196.6
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHH
Q 003029 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (856)
Q Consensus 230 ~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (856)
...|+|++|......+......+..+.++.+..|.+++....... ..+......+..+|.+.+.+......+....
T Consensus 92 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~--- 167 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG--- 167 (377)
T ss_pred CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc---
Confidence 356999999655444333333334457888889987653221111 1122233345678999998876666654310
Q ss_pred hCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHH
Q 003029 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (856)
Q Consensus 310 lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l 389 (856)
....++.++|+|+|...+.+... .....+ ....+++.|+++||+.+.||+..+++|++.+.
T Consensus 168 -------------~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~ 228 (377)
T cd03798 168 -------------IDPEKVTVIPNGVDTERFSPADR-----AEARKL-GLPEDKKVILFVGRLVPRKGIDYLIEALARLL 228 (377)
T ss_pred -------------CCCCceEEcCCCcCcccCCCcch-----HHHHhc-cCCCCceEEEEeccCccccCHHHHHHHHHHHH
Confidence 12357889999999988764321 001111 11246788999999999999999999999998
Q ss_pred HhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 003029 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 469 (856)
Q Consensus 390 ~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~ 469 (856)
+++|+ +.|+++|.+ +....++ +++...+. .+.+.+.|.++.+++..+|+.||++++||..
T Consensus 229 ~~~~~----~~l~i~g~~-----~~~~~~~----~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~ 288 (377)
T cd03798 229 KKRPD----VHLVIVGDG-----PLREALE----ALAAELGL-------EDRVTFLGAVPHEEVPAYYAAADVFVLPSLR 288 (377)
T ss_pred hcCCC----eEEEEEcCC-----cchHHHH----HHHHhcCC-------cceEEEeCCCCHHHHHHHHHhcCeeecchhh
Confidence 87665 457766532 2222233 33322221 1234458999999999999999999999999
Q ss_pred cCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHH-HHHHhc
Q 003029 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF-THVTTH 546 (856)
Q Consensus 470 EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~-~~v~~~ 546 (856)
||+|++++|||+|+ .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.++++++.. ++..+.+ ...+.+
T Consensus 289 ~~~~~~~~Ea~~~G----~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~---~~~~~~~~~~~~~~ 361 (377)
T cd03798 289 EGFGLVLLEAMACG----LPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL---RLGRAARRRVAERF 361 (377)
T ss_pred ccCChHHHHHHhcC----CCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH---HHhHHHHHHHHHHh
Confidence 99999999999994 899999999988887 4457999999999999999999998753 3444444 445778
Q ss_pred CHHHHHHHHHHHHHH
Q 003029 547 TAQEWAETFVSELND 561 (856)
Q Consensus 547 ~~~~W~~~fl~~l~~ 561 (856)
++..+++.+.+.+++
T Consensus 362 s~~~~~~~~~~~~~~ 376 (377)
T cd03798 362 SWENVAERLLELYRE 376 (377)
T ss_pred hHHHHHHHHHHHHhh
Confidence 888888888876654
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.9e-19 Score=197.21 Aligned_cols=272 Identities=23% Similarity=0.189 Sum_probs=193.3
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCccc----HHHHHH-hhcCCEEEEeCHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR----SDLLRA-VLAADLVGFHTYDYARHFVSA 305 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~----~~il~~-ll~aDlIgf~t~~~~~~Fl~~ 305 (856)
..|+|++|.............+..++++.+++|..||........... ..+.+. ...+|.+.+.+......+..
T Consensus 83 ~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~- 161 (364)
T cd03814 83 APDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRA- 161 (364)
T ss_pred CCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHHHHhc-
Confidence 459999987544332222323345688888999877632211111111 122222 34678888877765542211
Q ss_pred HHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh--cCCceEEEeecccccCChHHHHH
Q 003029 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLDMIKGIPQKLL 383 (856)
Q Consensus 306 ~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iIl~V~Rld~~KGi~~~L~ 383 (856)
....++.++|+|+|.+.|.+..... ..++++ .++++|+++||+.+.||+..+++
T Consensus 162 -----------------~~~~~~~~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~i~~~G~~~~~k~~~~~i~ 217 (364)
T cd03814 162 -----------------RGFRRVRLWPRGVDTELFHPRRRDE-------ALRARLGPPDRPVLLYVGRLAPEKNLEALLD 217 (364)
T ss_pred -----------------cCCCceeecCCCccccccCcccccH-------HHHHHhCCCCCeEEEEEeccccccCHHHHHH
Confidence 0123678899999998876532211 112222 35788999999999999999999
Q ss_pred HHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 003029 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (856)
Q Consensus 384 Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~ 463 (856)
|+..+.++ |++ .|+++|. +++...++ .. ...|.+ .|.++.+++..+|+.||++
T Consensus 218 ~~~~l~~~-~~~----~l~i~G~-----~~~~~~~~--------~~--------~~~v~~-~g~~~~~~~~~~~~~~d~~ 270 (364)
T cd03814 218 ADLPLRRR-PPV----RLVIVGD-----GPARARLE--------AR--------YPNVHF-LGFLDGEELAAAYASADVF 270 (364)
T ss_pred HHHHhhhc-CCc----eEEEEeC-----CchHHHHh--------cc--------CCcEEE-EeccCHHHHHHHHHhCCEE
Confidence 99998776 654 4777763 22221221 10 113554 7789999999999999999
Q ss_pred EECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 003029 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (856)
Q Consensus 464 v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~ 541 (856)
++||..||||++++|||||+ .|+|+|+.+|..+.+ +..|++++|.|.++++++|.++++++ +++.++...+++
T Consensus 271 l~~s~~e~~~~~~lEa~a~g----~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~ 345 (364)
T cd03814 271 VFPSRTETFGLVVLEAMASG----LPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADP-ELRRRMAARARA 345 (364)
T ss_pred EECcccccCCcHHHHHHHcC----CCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHH
Confidence 99999999999999999994 899999999988888 35799999999999999999999865 477788888888
Q ss_pred HHHhcCHHHHHHHHHHHH
Q 003029 542 HVTTHTAQEWAETFVSEL 559 (856)
Q Consensus 542 ~v~~~~~~~W~~~fl~~l 559 (856)
.+..+++..+++.+++.+
T Consensus 346 ~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 346 EAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHhhcCHHHHHHHHHHhh
Confidence 888999999999887654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.6e-20 Score=194.13 Aligned_cols=192 Identities=17% Similarity=0.291 Sum_probs=131.0
Q ss_pred EEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEeeCceE
Q 003029 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGMF 671 (856)
Q Consensus 594 I~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliaenG~~ 671 (856)
||+|+||||+++ ...++++++++|++|.+ +|+.++|+|||++..+.++++.++ .++|++||++
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~ 65 (254)
T PF08282_consen 1 IFSDLDGTLLNS--------------DGKISPETIEALKELQE-KGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGAL 65 (254)
T ss_dssp EEEECCTTTCST--------------TSSSCHHHHHHHHHHHH-TTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTE
T ss_pred cEEEECCceecC--------------CCeeCHHHHHHHHhhcc-cceEEEEEccCcccccccccccccchhhhcccccce
Confidence 789999999986 35599999999999997 799999999999999999999885 5999999999
Q ss_pred EEecCCeeeecccccCChHHHHHHHHHHHHHHhcC-------CC-cEEeee-----------c-----------------
Q 003029 672 LRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERT-------PR-SHFEQR-----------E----------------- 715 (856)
Q Consensus 672 i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt-------~g-s~ie~k-----------~----------------- 715 (856)
+....++. +....++ .+.+..+++...+.. +. .++... .
T Consensus 66 i~~~~~~~--l~~~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (254)
T PF08282_consen 66 IDDPKGKI--LYEKPID---SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEE 140 (254)
T ss_dssp EEETTTEE--EEEESB----HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSS
T ss_pred eeeccccc--chhhhee---ccchhheeehhhhcccccccccceeeecccccccchhhhhhccccccccccccccccccc
Confidence 94333321 1112234 344555555443321 11 111111 0
Q ss_pred -ceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEE
Q 003029 716 -TSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVL 794 (856)
Q Consensus 716 -~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vl 794 (856)
..+.+. .++ .+...+.+.+ ...+......+..+..++||.|+++|||.|+++|++++| ++.++++
T Consensus 141 i~ki~~~---~~~----~~~~~l~~~l-~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~------i~~~~~~ 206 (254)
T PF08282_consen 141 IFKILFF---PDP----EDLEQLREEL-KKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLG------ISPEDII 206 (254)
T ss_dssp ESEEEEE---SCH----HHHHHHHHHH-HHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHHT------TSGGGEE
T ss_pred ceeeecc---ccc----hhhhhhhhhh-ccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhcc------cccceeE
Confidence 000000 011 1223333333 211121112345678999999999999999999999999 6789999
Q ss_pred EEecCCcccccccccccccCcceEEeCCCC
Q 003029 795 CIGHFLGKNCNLPLQFLMQTISTVRLDSSF 824 (856)
Q Consensus 795 a~GD~~~nDe~M~f~~~~~~~~~v~V~~~~ 824 (856)
|||| +.||++| |+.+ +.+|.+++..
T Consensus 207 ~~GD-~~ND~~M-l~~~---~~~~am~na~ 231 (254)
T PF08282_consen 207 AFGD-SENDIEM-LELA---GYSVAMGNAT 231 (254)
T ss_dssp EEES-SGGGHHH-HHHS---SEEEEETTS-
T ss_pred Eeec-ccccHhH-Hhhc---CeEEEEcCCC
Confidence 9999 9999999 8877 8899999873
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.6e-19 Score=192.91 Aligned_cols=262 Identities=17% Similarity=0.102 Sum_probs=182.9
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (856)
..|+|++|+.+...+...+... ..++.+..|..++...... .+.......+..+|.+.+.+......+
T Consensus 83 ~~d~i~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~-------- 150 (348)
T cd03820 83 KPDVVISFLTSLLTFLASLGLK--IVKLIVSEHNSPDAYKKRL--RRLLLRRLLYRRADAVVVLTEEDRALY-------- 150 (348)
T ss_pred CCCEEEEcCchHHHHHHHHhhc--cccEEEecCCCccchhhhh--HHHHHHHHHHhcCCEEEEeCHHHHHHh--------
Confidence 5699999998722222222221 1478888887654322110 011112333557888888876544111
Q ss_pred CcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHH
Q 003029 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (856)
Q Consensus 311 g~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~ 390 (856)
......++.++|+|+|...+... ...+++.++++||+.+.||++.+++|+..+.+
T Consensus 151 ----------~~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~ 205 (348)
T cd03820 151 ----------YKKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAK 205 (348)
T ss_pred ----------hccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHHh
Confidence 01123578899999998765432 12457899999999999999999999999988
Q ss_pred hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCc
Q 003029 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (856)
Q Consensus 391 ~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~E 470 (856)
.+|++ .|+++|.+ ++... +.+++.+.+. .+.+.+.+. .+++..+|+.||++++||..|
T Consensus 206 ~~~~~----~l~i~G~~-----~~~~~----~~~~~~~~~~-------~~~v~~~g~--~~~~~~~~~~ad~~i~ps~~e 263 (348)
T cd03820 206 KHPDW----KLRIVGDG-----PEREA----LEALIKELGL-------EDRVILLGF--TKNIEEYYAKASIFVLTSRFE 263 (348)
T ss_pred cCCCe----EEEEEeCC-----CCHHH----HHHHHHHcCC-------CCeEEEcCC--cchHHHHHHhCCEEEeCcccc
Confidence 77764 47777632 22222 3333333332 123334665 689999999999999999999
Q ss_pred CCChhHHHHHhhcCCCCceEEEeCCCCchhhc---cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcC
Q 003029 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547 (856)
Q Consensus 471 G~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l---g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~ 547 (856)
|||++++|||+|+ .|+|+|+..|..+.+ +.+|+++++.|++++|++|.++++++ +.+.++.++++..++.++
T Consensus 264 ~~~~~~~Ea~a~G----~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~ 338 (348)
T cd03820 264 GFPMVLLEAMAFG----LPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDE-ELRKRMGANARESAERFS 338 (348)
T ss_pred ccCHHHHHHHHcC----CCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhC
Confidence 9999999999994 899999876655444 34899999999999999999999865 466677777788889999
Q ss_pred HHHHHHHHH
Q 003029 548 AQEWAETFV 556 (856)
Q Consensus 548 ~~~W~~~fl 556 (856)
++..++.|.
T Consensus 339 ~~~~~~~~~ 347 (348)
T cd03820 339 IENIIKQWE 347 (348)
T ss_pred HHHHHHHhc
Confidence 998888764
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=1e-19 Score=200.37 Aligned_cols=195 Identities=18% Similarity=0.181 Sum_probs=145.8
Q ss_pred eecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCC
Q 003029 331 FPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 410 (856)
Q Consensus 331 iP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~ 410 (856)
+|+|||++.|.+... ...+..+.+...+++..+|++|||+++.||+..+|+|++++.+++|++..++.|+++|.
T Consensus 118 I~~GVD~~~f~p~~~--~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---- 191 (335)
T PHA01633 118 VFHGINFKIVENAEK--LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---- 191 (335)
T ss_pred eeCCCChhhcCccch--hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----
Confidence 678999999875321 01112222222234667899999999999999999999999999998766677776641
Q ss_pred ChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeC--CCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCc
Q 003029 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD--RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKG 488 (856)
Q Consensus 411 ~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~--g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g 488 (856)
. +++++ +..+ .|+|+. |.++.+++.++|+.||+||+||..||||++++|||||+ .
T Consensus 192 --~-------~~~~l--------~l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G----~ 248 (335)
T PHA01633 192 --K-------QFTQL--------EVPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMG----T 248 (335)
T ss_pred --H-------HHHHc--------CCCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcC----C
Confidence 1 11111 1111 366542 77789999999999999999999999999999999994 8
Q ss_pred eEEEeCCCCchhhcc------------------C--CeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCH
Q 003029 489 VLILSEFAGAAQSLG------------------A--GAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTA 548 (856)
Q Consensus 489 ~lVlSe~aG~~~~lg------------------~--~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~ 548 (856)
|+|+|..+|..+..| . .|+++++.|++++|++|.+++.++. +..+..++++..+++++
T Consensus 249 PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~--~~~~~~~~~~~a~~f~~ 326 (335)
T PHA01633 249 PVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD--REERSMKLKELAKKYDI 326 (335)
T ss_pred CEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC--hhhhhHHHHHHHHhcCH
Confidence 999998888777543 1 2557889999999999999988763 33445566788999999
Q ss_pred HHHHHHHH
Q 003029 549 QEWAETFV 556 (856)
Q Consensus 549 ~~W~~~fl 556 (856)
..-.++|+
T Consensus 327 ~~~~~~~~ 334 (335)
T PHA01633 327 RNLYTRFL 334 (335)
T ss_pred HHHHHHhh
Confidence 88777765
|
|
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.83 E-value=9e-19 Score=199.37 Aligned_cols=280 Identities=16% Similarity=0.122 Sum_probs=181.2
Q ss_pred HHHHHHHHHhcC--CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhc------CcccH----------H
Q 003029 219 QMFADVVNKHYK--DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRT------LPSRS----------D 280 (856)
Q Consensus 219 ~~fa~~i~~~~~--~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~------lp~~~----------~ 280 (856)
..+...+.+..+ +.|+|++|...+. .++.....+.+..+..|--. ++.+.. .|.+. .
T Consensus 90 ~~~~~~l~~~~~~~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (397)
T TIGR03087 90 RRLARWVNALLAAEPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVD--SDKWLQYARTKRWPLRWIYRREGRLLLA 164 (397)
T ss_pred HHHHHHHHHHHhhCCCCEEEEeccccc---eeccccccCCCeEeehhhHH--HHHHHHHHhccCcchhHHHHHHHHHHHH
Confidence 334445555543 4699999864332 33332334567777666421 111111 11110 0
Q ss_pred HHH-HhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHH
Q 003029 281 LLR-AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQET 359 (856)
Q Consensus 281 il~-~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~ 359 (856)
+-+ .+..+|.|.+.+....+.+.+ .. .....++.++|+|||.+.|.+....+ ..+
T Consensus 165 ~e~~~~~~ad~vi~~S~~~~~~l~~----~~-----------~~~~~~v~vipngvd~~~f~~~~~~~------~~~--- 220 (397)
T TIGR03087 165 YERAIAARFDAATFVSRAEAELFRR----LA-----------PEAAGRITAFPNGVDADFFSPDRDYP------NPY--- 220 (397)
T ss_pred HHHHHHhhCCeEEEcCHHHHHHHHH----hC-----------CCCCCCeEEeecccchhhcCCCcccc------CCC---
Confidence 001 234678888777766555432 11 11234788999999999886532110 000
Q ss_pred hcCCceEEEeecccccCChHHHH----HHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCC
Q 003029 360 FAGRKVMLGVDRLDMIKGIPQKL----LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT 435 (856)
Q Consensus 360 ~~~~~iIl~V~Rld~~KGi~~~L----~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~ 435 (856)
..++++|+++||+++.||++.++ .++..+.+.+|+++ |+++|.+ ++ .+++++.. .
T Consensus 221 ~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l~ivG~g-----~~-----~~~~~l~~----~--- 279 (397)
T TIGR03087 221 PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----FYIVGAK-----PS-----PAVRALAA----L--- 279 (397)
T ss_pred CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----EEEECCC-----Ch-----HHHHHhcc----C---
Confidence 13567999999999999999888 56666777788754 8777632 22 12333311 1
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc-cCCeEEECCCC
Q 003029 436 LTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-GAGAILVNPWN 513 (856)
Q Consensus 436 ~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~-~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l-g~~g~lVnP~d 513 (856)
..|+ +.|.++ ++..+|+.||++|+||. .||++++++|||||+ .|+|+|..++..... +..|+++. .|
T Consensus 280 ---~~V~-~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G----~PVV~t~~~~~~i~~~~~~g~lv~-~~ 348 (397)
T TIGR03087 280 ---PGVT-VTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMA----KPVVASPEAAEGIDALPGAELLVA-AD 348 (397)
T ss_pred ---CCeE-EeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcC----CCEEecCcccccccccCCcceEeC-CC
Confidence 1255 478886 68999999999999997 599999999999994 899998864322111 34588886 89
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Q 003029 514 ITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELN 560 (856)
Q Consensus 514 ~~~lA~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~ 560 (856)
++++|++|.++++++ +.+.++.+++++++ +.|+|...++.+.+-+.
T Consensus 349 ~~~la~ai~~ll~~~-~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 349 PADFAAAILALLANP-AEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 999999999999864 47778888889887 57899999888876553
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-19 Score=212.63 Aligned_cols=225 Identities=14% Similarity=0.142 Sum_probs=143.2
Q ss_pred HHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 582 SIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 582 ~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
..+-|+. ++|+|++|+||||++. +.+++++++++|++|.+ +|+.|+|+|||++..+.+.+..++
T Consensus 300 ~~~~~~~-~iKLIa~DLDGTLLn~--------------d~~Is~~t~eAI~kl~e-kGi~~vIATGR~~~~i~~~l~~L~ 363 (580)
T PLN02887 300 SLRFYKP-KFSYIFCDMDGTLLNS--------------KSQISETNAKALKEALS-RGVKVVIATGKARPAVIDILKMVD 363 (580)
T ss_pred chhhhcc-CccEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHhC
Confidence 4445554 6899999999999986 45799999999999996 799999999999999998888764
Q ss_pred c-----------eEEeeCceEEEe-cCC-eeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEE---------
Q 003029 662 L-----------WLAAENGMFLRC-TTG-KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLV--------- 719 (856)
Q Consensus 662 l-----------gliaenG~~i~~-~~~-~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~--------- 719 (856)
+ ++|+.||+.|.. .++ .+... ++ .+.+.++++...+..-...+...+....
T Consensus 364 l~~~~~~I~~~~p~I~~NGA~I~d~~g~~I~~~~----L~---~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~ 436 (580)
T PLN02887 364 LAGKDGIISESSPGVFLQGLLVYGRQGREIYRSN----LD---QEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDS 436 (580)
T ss_pred cccccceEeecccEEeecCeEEEECCCcEEEEEe----CC---HHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHH
Confidence 2 355679999985 222 23333 33 3445555544322111000111100000
Q ss_pred EE--ee--c---C-Ch-hh------------h--HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHH
Q 003029 720 WN--YK--Y---A-DV-EF------------G--RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDR 775 (856)
Q Consensus 720 ~~--y~--~---~-d~-e~------------~--~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ 775 (856)
++ +. . . +. ++ . ......+.+.+ .+.+. ..+.++ ++..++||.|+|+|||.|++.
T Consensus 437 ~~~~~~~~~~~~i~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l-~~~~~-~~~~v~~S~~~~lEI~p~gvSKG~ALk~ 514 (580)
T PLN02887 437 LHTIYHEPKAEIMSSVDQLLAAADIQKVIFLDTAEGVSSVLRPYW-SEATG-DRANVVQAQPDMLEIVPPGTSKGNGVKM 514 (580)
T ss_pred HHHhhccccccccCCHHHhhcccCeeEEEEEcChHHHHHHHHHHH-HHHhc-CcEEEEEecCcEEEEecCCCCHHHHHHH
Confidence 00 00 0 0 00 00 0 00011222222 22121 235544 456799999999999999999
Q ss_pred HHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccC--CHHHHHHHHHHHH
Q 003029 776 ILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLR--MKMCMRFLSQNYL 842 (856)
Q Consensus 776 ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~--~~~~~~~~l~~~~ 842 (856)
|++++| ++.++|+|||| +.||++| |+++ +.+|.++|.. + |=.. +-+-|.+.|++++
T Consensus 515 L~e~lG------I~~eeviAFGD-s~NDIeM-Le~A---G~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 515 LLNHLG------VSPDEIMAIGD-GENDIEM-LQLA---SLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred HHHHcC------CCHHHEEEEec-chhhHHH-HHHC---CCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 999999 67899999999 9999999 8876 6789998862 2 3222 3344777776653
|
|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.7e-18 Score=188.94 Aligned_cols=258 Identities=19% Similarity=0.191 Sum_probs=178.6
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (856)
..|+|++|.+..+..+.+...+...+++.+++|-.++... ....+. ...|.+...+....+.|.. .
T Consensus 96 ~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~------~~~~~~---~~~d~ii~~s~~~~~~~~~-----~ 161 (359)
T cd03823 96 RPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICP------RQGLFK---KGGDAVIAPSRFLLDRYVA-----N 161 (359)
T ss_pred CCCEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecc------hhhhhc---cCCCEEEEeCHHHHHHHHH-----c
Confidence 3599999987555444332223345899999997653211 111111 1128888877655554432 1
Q ss_pred CcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHH
Q 003029 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (856)
Q Consensus 311 g~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~ 390 (856)
+ ....++.++|+|+|...+.+... ....++.+|+++||+.+.||+..+++|+..+.+
T Consensus 162 ~-----------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~ 218 (359)
T cd03823 162 G-----------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR 218 (359)
T ss_pred C-----------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCHHHHHHHHHHHHh
Confidence 1 11357899999999987754211 012466789999999999999999999998866
Q ss_pred hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-C
Q 003029 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-R 469 (856)
Q Consensus 391 ~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~-~ 469 (856)
++ +.|+++|... ......... .. ...|. +.|.++.+++..+|+.||++++||. .
T Consensus 219 --~~----~~l~i~G~~~-----~~~~~~~~~-----~~--------~~~v~-~~g~~~~~~~~~~~~~ad~~i~ps~~~ 273 (359)
T cd03823 219 --GD----IELVIVGNGL-----ELEEESYEL-----EG--------DPRVE-FLGAYPQEEIDDFYAEIDVLVVPSIWP 273 (359)
T ss_pred --cC----cEEEEEcCch-----hhhHHHHhh-----cC--------CCeEE-EeCCCCHHHHHHHHHhCCEEEEcCccc
Confidence 44 5587776432 111111111 10 11355 5899999999999999999999998 7
Q ss_pred cCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcC
Q 003029 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547 (856)
Q Consensus 470 EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~ 547 (856)
||+|++++|||+|+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++.+ +.+..+.++.++.+..
T Consensus 274 e~~~~~~~Ea~a~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~-- 346 (359)
T cd03823 274 ENFPLVIREALAAG----VPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDP-DLLERLRAGIEPPRSI-- 346 (359)
T ss_pred CCCChHHHHHHHCC----CCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhCh-HHHHHHHHhHHHhhhH--
Confidence 99999999999994 899999999988888 34799999999999999999999854 4666666666666543
Q ss_pred HHHHHHHHHHH
Q 003029 548 AQEWAETFVSE 558 (856)
Q Consensus 548 ~~~W~~~fl~~ 558 (856)
...++.+++.
T Consensus 347 -~~~~~~~~~~ 356 (359)
T cd03823 347 -EDQAEEYLKL 356 (359)
T ss_pred -HHHHHHHHHH
Confidence 5555555443
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=99.83 E-value=3e-19 Score=189.90 Aligned_cols=213 Identities=15% Similarity=0.161 Sum_probs=134.3
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc-C---ceEEe
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY-N---LWLAA 666 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l-~---lglia 666 (856)
++++++|+||||+++ +.+++++++++|++|.+ . +.|+++|||+...+.+.|+.. . .++|+
T Consensus 7 ~~i~~~D~DGTLl~~--------------~~~i~~~~~~ai~~l~~-~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~ 70 (245)
T PLN02423 7 GVIALFDVDGTLTAP--------------RKEATPEMLEFMKELRK-V-VTVGVVGGSDLSKISEQLGKTVINDYDYVFS 70 (245)
T ss_pred ceEEEEeccCCCcCC--------------CCcCCHHHHHHHHHHHh-C-CEEEEECCcCHHHHHHHhcccccccCCEEEE
Confidence 346669999999986 45689999999999985 4 999999999999998888874 2 47899
Q ss_pred eCceEEEecCCe-eeecccccCChHHHHHHHHHHHHHHhc-----CCCcEEeeecceEEEEe--ecCChh----hh----
Q 003029 667 ENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTER-----TPRSHFEQRETSLVWNY--KYADVE----FG---- 730 (856)
Q Consensus 667 enG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~r-----t~gs~ie~k~~si~~~y--~~~d~e----~~---- 730 (856)
+||+++...++. +...++..++.+-...+.+.++.+... ..+.+++..+..+.+.+ .++... +.
T Consensus 71 ~NGa~i~~~g~~i~~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~ 150 (245)
T PLN02423 71 ENGLVAHKDGKLIGTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDK 150 (245)
T ss_pred CCceEEEeCCEEEEEecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCc
Confidence 999999854322 211121223323333333333332111 12344443322222221 222111 00
Q ss_pred -HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecC---Cccccc
Q 003029 731 -RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGKNCN 805 (856)
Q Consensus 731 -~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~---~~nDe~ 805 (856)
.....++.+.+ ...+.+..+.+. .|..++||+++|+|||.|++.|+ . +++++||||+ +.||.+
T Consensus 151 i~~~~~~~~~~l-~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~---~--------~~e~~aFGD~~~~~~ND~e 218 (245)
T PLN02423 151 VHNIRPKMVSVL-REKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE---D--------FDEIHFFGDKTYEGGNDHE 218 (245)
T ss_pred cchHHHHHHHHH-HHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc---C--------cCeEEEEeccCCCCCCcHH
Confidence 01112333444 332333344433 34589999999999999999998 2 6899999994 599999
Q ss_pred ccccccccCcceEEeCCCCccccCCHHHHHHHHHHHH
Q 003029 806 LPLQFLMQTISTVRLDSSFLHYLRMKMCMRFLSQNYL 842 (856)
Q Consensus 806 M~f~~~~~~~~~v~V~~~~~~~l~~~~~~~~~l~~~~ 842 (856)
| ++.-+-. + +.+.+|.|+..+|++++
T Consensus 219 M-l~~~~~~--~--------~~~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 219 I-FESERTI--G--------HTVTSPDDTREQCTALF 244 (245)
T ss_pred H-HhCCCcc--e--------EEeCCHHHHHHHHHHhc
Confidence 9 7643222 2 34468999999999875
|
|
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-18 Score=199.15 Aligned_cols=186 Identities=12% Similarity=0.034 Sum_probs=135.9
Q ss_pred eecccChhhhhhhhcCCchHHHHHHHHHHh-cC---CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEc
Q 003029 331 FPIGIDSERFIRALEINPVQVHIKELQETF-AG---RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 406 (856)
Q Consensus 331 iP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~---~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~ 406 (856)
.+.|||++.|.+.... +++.+ ++ .+++++||||.+.||+..+|+||..+.+..|++ .|+++|
T Consensus 201 ~v~GVd~~~f~~~~~~---------~~~~~~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~----~l~ivG- 266 (462)
T PLN02846 201 NVHGVNPKFLEIGKLK---------LEQQKNGEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGL----EVDLYG- 266 (462)
T ss_pred cCceechhhcCCCccc---------HhhhcCCCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCe----EEEEEC-
Confidence 4589999988754211 11122 22 346999999999999999999999998888874 477775
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCC
Q 003029 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 486 (856)
Q Consensus 407 p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~ 486 (856)
+||+..+|++.+. +++. .+++|.|..+.+ .+|+.+||||+||.+||||+|++|||||+
T Consensus 267 ----dGp~~~~L~~~a~----~l~l--------~~~vf~G~~~~~---~~~~~~DvFv~pS~~Et~g~v~lEAmA~G--- 324 (462)
T PLN02846 267 ----SGEDSDEVKAAAE----KLEL--------DVRVYPGRDHAD---PLFHDYKVFLNPSTTDVVCTTTAEALAMG--- 324 (462)
T ss_pred ----CCccHHHHHHHHH----hcCC--------cEEEECCCCCHH---HHHHhCCEEEECCCcccchHHHHHHHHcC---
Confidence 5666555554443 3321 144467765544 68999999999999999999999999994
Q ss_pred CceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003029 487 KGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 487 ~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (856)
.|+|+++..| .+.+ +.+|+++ .|.++++++|.++|+.+++++.. + ....++|+.-+++|+..+.-.
T Consensus 325 -~PVVa~~~~~-~~~v~~~~ng~~~--~~~~~~a~ai~~~l~~~~~~~~~---~---a~~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 325 -KIVVCANHPS-NEFFKQFPNCRTY--DDGKGFVRATLKALAEEPAPLTD---A---QRHELSWEAATERFLRVADLD 392 (462)
T ss_pred -CcEEEecCCC-cceeecCCceEec--CCHHHHHHHHHHHHccCchhHHH---H---HHHhCCHHHHHHHHHHHhccC
Confidence 8999998876 5766 6788887 48999999999999865433211 1 224788888888888766543
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-18 Score=200.86 Aligned_cols=264 Identities=11% Similarity=0.094 Sum_probs=162.8
Q ss_pred CCCEEEEeCcc-chhH--HHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHH--
Q 003029 231 DGDVVWCHDYH-LMFL--PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSA-- 305 (856)
Q Consensus 231 ~~DvIwvHDyh-l~ll--p~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~-- 305 (856)
+.||||+|..- |-.. +....+++ + +++..+||.|+.+--...+..-+.++. .++++|+..
T Consensus 434 ~PDVVHLatP~~LGw~~~Glr~ArKl-~-PVVasyHTny~eYl~~y~~g~L~~~ll-------------k~l~~~v~r~h 498 (794)
T PLN02501 434 DADIAILEEPEHLNWYHHGKRWTDKF-N-HVVGVVHTNYLEYIKREKNGALQAFFV-------------KHINNWVTRAY 498 (794)
T ss_pred CCCEEEECCchhhccHHHHHHHHHHc-C-CeEEEEeCCcHHHHhHhcchhHHHHHH-------------HHHHHHHHHhh
Confidence 56999999854 3333 22232333 2 688889999985322222221111111 122233332
Q ss_pred HHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhc---CCceEEEeecccccCChHHHH
Q 003029 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLDMIKGIPQKL 382 (856)
Q Consensus 306 ~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~iIl~V~Rld~~KGi~~~L 382 (856)
|+.++.++.... .+. ...+. ..+|||++.|.+.... ... ..++ ..+.+++||||.+.||+..+|
T Consensus 499 cD~VIaPS~atq--~L~--~~vI~-nVnGVDte~F~P~~r~-------~~~-r~lgi~~~~kgiLfVGRLa~EKGld~LL 565 (794)
T PLN02501 499 CHKVLRLSAATQ--DLP--KSVIC-NVHGVNPKFLKIGEKV-------AEE-RELGQQAFSKGAYFLGKMVWAKGYRELI 565 (794)
T ss_pred CCEEEcCCHHHH--Hhc--cccee-ecccccccccCCcchh-------HHH-HhcCCccccCceEEEEcccccCCHHHHH
Confidence 444444321000 011 11111 1259999999864221 111 1221 235589999999999999999
Q ss_pred HHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccE
Q 003029 383 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 462 (856)
Q Consensus 383 ~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv 462 (856)
+|+..+.++.|++ .|+++| +||+..+++ +++.+++. .|.| .|..+ +...+|+.+||
T Consensus 566 eAla~L~~~~pnv----rLvIVG-----DGP~reeLe----~la~eLgL--------~V~F-LG~~d--d~~~lyasaDV 621 (794)
T PLN02501 566 DLLAKHKNELDGF----NLDVFG-----NGEDAHEVQ----RAAKRLDL--------NLNF-LKGRD--HADDSLHGYKV 621 (794)
T ss_pred HHHHHHHhhCCCe----EEEEEc-----CCccHHHHH----HHHHHcCC--------EEEe-cCCCC--CHHHHHHhCCE
Confidence 9999988877764 488775 455544444 44433321 2554 55543 34579999999
Q ss_pred EEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 003029 463 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (856)
Q Consensus 463 ~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~ 540 (856)
||+||.+||||+|++|||||+ .|||+|+..|.. .+ |.+|++. .|+++++++|.++|.+++ ++..+.
T Consensus 622 FVlPS~sEgFGlVlLEAMA~G----lPVVATd~pG~e-~V~~g~nGll~--~D~EafAeAI~~LLsd~~-~rl~~~---- 689 (794)
T PLN02501 622 FINPSISDVLCTATAEALAMG----KFVVCADHPSNE-FFRSFPNCLTY--KTSEDFVAKVKEALANEP-QPLTPE---- 689 (794)
T ss_pred EEECCCcccchHHHHHHHHcC----CCEEEecCCCCc-eEeecCCeEec--CCHHHHHHHHHHHHhCch-hhhHHH----
Confidence 999999999999999999994 899999998754 34 4566653 799999999999999775 332221
Q ss_pred HHHHhcCHHHHHHHHHHHH
Q 003029 541 THVTTHTAQEWAETFVSEL 559 (856)
Q Consensus 541 ~~v~~~~~~~W~~~fl~~l 559 (856)
....++|..-++.++..-
T Consensus 690 -a~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 690 -QRYNLSWEAATQRFMEYS 707 (794)
T ss_pred -HHhhCCHHHHHHHHHHhh
Confidence 133677777777776543
|
|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-18 Score=199.16 Aligned_cols=271 Identities=9% Similarity=-0.011 Sum_probs=176.8
Q ss_pred CCCCEEEEeCccch--h-HHHHHHhcCCCCeEEEEEecCCCchhhhhcCccc------HHHHHH-h-hcCCEEEEeCHHH
Q 003029 230 KDGDVVWCHDYHLM--F-LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR------SDLLRA-V-LAADLVGFHTYDY 298 (856)
Q Consensus 230 ~~~DvIwvHDyhl~--l-lp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~------~~il~~-l-l~aDlIgf~t~~~ 298 (856)
+..|+|++|..... . ++.++++ ..+.|+.+.+|.-+++..-. ..+.. ...++. + ..||.|...+...
T Consensus 94 ~~~Dvi~~~~~~~~~~~~~a~~~~~-~~~~~~V~~~h~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~ 171 (415)
T cd03816 94 RPADYILIQNPPSIPTLLIAWLYCL-LRRTKLIIDWHNYGYTILAL-KLGENHPLVRLAKWYEKLFGRLADYNLCVTKAM 171 (415)
T ss_pred CCCCEEEEeCCCCchHHHHHHHHHH-HhCCeEEEEcCCchHHHHhc-ccCCCCHHHHHHHHHHHHHhhcCCEeeecCHHH
Confidence 35799999985432 2 2333333 34688999999754321100 01100 011111 1 3478887777654
Q ss_pred HHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHH---------------H--hc
Q 003029 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQE---------------T--FA 361 (856)
Q Consensus 299 ~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~---------------~--~~ 361 (856)
.+.+.. .+ ....++.++|+| +.+.|.+.... .....+.+ . -+
T Consensus 172 ~~~l~~-----~~-----------~~~~ki~vI~Ng-~~~~f~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (415)
T cd03816 172 KEDLQQ-----FN-----------NWKIRATVLYDR-PPEQFRPLPLE----EKHELFLKLAKTFLTRELRIGAVQLSEE 230 (415)
T ss_pred HHHHHh-----hh-----------ccCCCeeecCCC-CHHHceeCcHH----HHHHHHHhccccccccccccccceecCC
Confidence 443321 11 134678899999 55667654211 11111111 0 12
Q ss_pred CCceEEEeecccccCChHHHHHHHHHHHHhCcCc--cCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcc
Q 003029 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDW--RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~--~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~ 439 (856)
+..+++++||+.+.||+..+|+|+..+.+..++. ..++.|+++|. ++.. +++++++.+.+ ..
T Consensus 231 ~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~-----G~~~----~~l~~~~~~~~-------l~ 294 (415)
T cd03816 231 RPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGK-----GPLK----EKYLERIKELK-------LK 294 (415)
T ss_pred CceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEec-----CccH----HHHHHHHHHcC-------CC
Confidence 3467889999999999999999999987632110 01356888873 3333 34444444332 22
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECC---CCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCH
Q 003029 440 PIHHLDRSLDFPALCALYAVTDVALVTS---LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI 514 (856)
Q Consensus 440 pV~~~~g~v~~~el~aly~~ADv~v~~S---~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~ 514 (856)
.++++.|.++.+++..+|++||++|+++ ..+||+++++|||||+ .|+|+|+.+|..+.+ |.+|++|+ |+
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G----~PVI~s~~~~~~eiv~~~~~G~lv~--d~ 368 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCG----LPVCALDFKCIDELVKHGENGLVFG--DS 368 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcC----CCEEEeCCCCHHHHhcCCCCEEEEC--CH
Confidence 4777788999999999999999999743 3588999999999994 899999999998888 56899994 99
Q ss_pred HHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHh
Q 003029 515 TEVANAIARALNMS--PEEREKRHWHNFTHVTT 545 (856)
Q Consensus 515 ~~lA~ai~~aL~~~--~~er~~r~~~~~~~v~~ 545 (856)
+++|++|.++++++ ++++.++.+++++..+.
T Consensus 369 ~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~~ 401 (415)
T cd03816 369 EELAEQLIDLLSNFPNRGKLNSLKKGAQEESEL 401 (415)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhc
Confidence 99999999999983 66777777777777643
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.3e-19 Score=192.26 Aligned_cols=216 Identities=15% Similarity=0.190 Sum_probs=138.6
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEee
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAE 667 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliae 667 (856)
++|+|++|+||||++. ...++++++++|++|.+ +|+.|+|+|||++..+.+.++.++ .++|+.
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~~~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~ 66 (272)
T PRK10530 2 TYRVIALDLDGTLLTP--------------KKTILPESLEALARARE-AGYKVIIVTGRHHVAIHPFYQALALDTPAICC 66 (272)
T ss_pred CccEEEEeCCCceECC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCCEEEc
Confidence 4699999999999986 35689999999999986 799999999999999999998885 469999
Q ss_pred CceEEEe-cCCe--eeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecce------------EEE----------Ee
Q 003029 668 NGMFLRC-TTGK--WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS------------LVW----------NY 722 (856)
Q Consensus 668 nG~~i~~-~~~~--w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~s------------i~~----------~y 722 (856)
||+.+.. .++. +.. .++ .+.+.++++...+..-..++...+.. ..| .+
T Consensus 67 NGa~i~d~~~~~~l~~~----~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (272)
T PRK10530 67 NGTYLYDYQAKKVLEAD----PLP---VQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTF 139 (272)
T ss_pred CCcEEEecCCCEEEEec----CCC---HHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccce
Confidence 9999985 2222 222 233 34455555443322111111100000 000 00
Q ss_pred ecCCh--hh----h-----------HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCC
Q 003029 723 KYADV--EF----G-----------RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSK 784 (856)
Q Consensus 723 ~~~d~--e~----~-----------~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~ 784 (856)
...+. +. . .....++.+.+ .....+.+. ++..++||.+++++||.|++++++++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~g--- 212 (272)
T PRK10530 140 TQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHV----EHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQG--- 212 (272)
T ss_pred EEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHH----hhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcC---
Confidence 00000 00 0 00011222222 122234433 345689999999999999999999999
Q ss_pred cCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCC--HHHHHHHHHHHH
Q 003029 785 KMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRM--KMCMRFLSQNYL 842 (856)
Q Consensus 785 ~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~--~~~~~~~l~~~~ 842 (856)
++++++++||| +.||++| |+.++ ++|.+++.. + |-.++ -.-|.+.|++++
T Consensus 213 ---i~~~e~i~~GD-~~NDi~m-~~~ag---~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 213 ---WSMKNVVAFGD-NFNDISM-LEAAG---LGVAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred ---CCHHHeEEeCC-ChhhHHH-HHhcC---ceEEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 67899999999 9999999 88774 677787642 2 43333 234777777664
|
|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-18 Score=192.51 Aligned_cols=214 Identities=12% Similarity=0.082 Sum_probs=153.8
Q ss_pred cCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceE
Q 003029 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVM 366 (856)
Q Consensus 287 ~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iI 366 (856)
.+|.|...+......+.. .+.. ...++.++|+|||++.|.+... ...++.++
T Consensus 94 ~ad~ii~~S~~~~~~l~~-----~g~~----------~~~~i~vIpNGVd~~~f~~~~~-------------~~~~~~vl 145 (331)
T PHA01630 94 PVDEIVVPSQWSKNAFYT-----SGLK----------IPQPIYVIPHNLNPRMFEYKPK-------------EKPHPCVL 145 (331)
T ss_pred cCCEEEECCHHHHHHHHH-----cCCC----------CCCCEEEECCCCCHHHcCCCcc-------------ccCCCEEE
Confidence 488888888765555432 1110 1236889999999988864311 01244566
Q ss_pred EEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCC
Q 003029 367 LGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 446 (856)
Q Consensus 367 l~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g 446 (856)
++++|+.+.||++.+|+|++.+.+++|++ .|+++|.. +. +. .+. .+ ..+.+
T Consensus 146 ~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~----~llivG~~-----~~--~~--~l~----~~------------~~~~~ 196 (331)
T PHA01630 146 AILPHSWDRKGGDIVVKIFHELQNEGYDF----YFLIKSSN-----ML--DP--RLF----GL------------NGVKT 196 (331)
T ss_pred EEeccccccCCHHHHHHHHHHHHhhCCCE----EEEEEeCc-----cc--ch--hhc----cc------------cceec
Confidence 67778999999999999999998877764 47777621 11 10 110 00 01245
Q ss_pred CCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEEC--------------
Q 003029 447 SLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVN-------------- 510 (856)
Q Consensus 447 ~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVn-------------- 510 (856)
.++.+++..+|+.||+||+||..||||++++|||||+ .|+|+|+.+|..+.+ |.+|++|+
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G----~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~ 272 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALG----LDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIH 272 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcC----CCEEEeCCCCchhhccCCCceEEeeecccccccccCCcc
Confidence 6889999999999999999999999999999999994 899999999888877 45666653
Q ss_pred -----CCCHHHHHHHHHHHHcCC-HHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHH
Q 003029 511 -----PWNITEVANAIARALNMS-PEEREKRH-WHNFTHVTTHTAQEWAETFVSELND 561 (856)
Q Consensus 511 -----P~d~~~lA~ai~~aL~~~-~~er~~r~-~~~~~~v~~~~~~~W~~~fl~~l~~ 561 (856)
|.|.+++++++.++|.++ ++++++++ .......+++++...++.+++.+++
T Consensus 273 ~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 273 VGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred cccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 227888999999999875 23444444 4445667899999999999887753
|
|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=3e-18 Score=187.33 Aligned_cols=273 Identities=20% Similarity=0.133 Sum_probs=191.6
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCc--ccHHHH-HHhhcCCEEEEeCHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP--SRSDLL-RAVLAADLVGFHTYDYARHFVSACT 307 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp--~~~~il-~~ll~aDlIgf~t~~~~~~Fl~~~~ 307 (856)
..|+|++|..+..++..+.+......++.+.+|...+... ..... ....+. ..+-.+|.+.+.+....+.+.+.
T Consensus 80 ~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-- 156 (359)
T cd03808 80 RPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFT-SGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKL-- 156 (359)
T ss_pred CCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhc-cchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHHh--
Confidence 4599999988877777777665566777887776432111 00000 001111 12345789988888776665431
Q ss_pred HHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHH
Q 003029 308 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEK 387 (856)
Q Consensus 308 ~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~ 387 (856)
+.. ....++.+.|+|+|.+.+...... ...++..|+++||+.+.||+..+++|+..
T Consensus 157 ---~~~---------~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~ 212 (359)
T cd03808 157 ---GII---------KKKKTVLIPGSGVDLDRFSPSPEP------------IPEDDPVFLFVARLLKDKGIDELLEAARI 212 (359)
T ss_pred ---cCC---------CcCceEEecCCCCChhhcCccccc------------cCCCCcEEEEEeccccccCHHHHHHHHHH
Confidence 100 013467788999999877543210 12467899999999999999999999999
Q ss_pred HHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECC
Q 003029 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTS 467 (856)
Q Consensus 388 ~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S 467 (856)
+.+++|++ .|+++|..... .+ .... ++...+.. ..|.+ .|. .+++..+|+.||++++||
T Consensus 213 l~~~~~~~----~l~i~G~~~~~---~~--~~~~---~~~~~~~~------~~v~~-~g~--~~~~~~~~~~adi~i~ps 271 (359)
T cd03808 213 LKAKGPNV----RLLLVGDGDEE---NP--AAIL---EIEKLGLE------GRVEF-LGF--RDDVPELLAAADVFVLPS 271 (359)
T ss_pred HHhcCCCe----EEEEEcCCCcc---hh--hHHH---HHHhcCCc------ceEEE-eec--cccHHHHHHhccEEEecC
Confidence 98777764 58777654321 11 1111 12222111 13554 555 678999999999999999
Q ss_pred CCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHH-HH
Q 003029 468 LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VT 544 (856)
Q Consensus 468 ~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~-v~ 544 (856)
..||||++++|||+|+ .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.+++..+ +.+.++.++++++ ..
T Consensus 272 ~~e~~~~~~~Ea~~~G----~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~~~ 346 (359)
T cd03808 272 YREGLPRVLLEAMAMG----RPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDP-ELRARMGQAARKRAEE 346 (359)
T ss_pred cccCcchHHHHHHHcC----CCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHH
Confidence 9999999999999994 899999999999888 56799999999999999999988765 4666777777777 58
Q ss_pred hcCHHHHHHHHH
Q 003029 545 THTAQEWAETFV 556 (856)
Q Consensus 545 ~~~~~~W~~~fl 556 (856)
.+++..+++.++
T Consensus 347 ~~s~~~~~~~~~ 358 (359)
T cd03808 347 EFDEEIVVKKLL 358 (359)
T ss_pred hcCHHHHHHHhh
Confidence 889888888765
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.6e-18 Score=189.25 Aligned_cols=262 Identities=21% Similarity=0.202 Sum_probs=180.0
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHH-HHHhhcCCEEEEeCHHHHHHHHHHHHH
Q 003029 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL-LRAVLAADLVGFHTYDYARHFVSACTR 308 (856)
Q Consensus 230 ~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~i-l~~ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (856)
.+.|+|++|+...+.....+... .+.+..+++|........+. .....+ -..+..+|.|...+..+.+.+..
T Consensus 82 ~~~Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~---- 154 (357)
T cd03795 82 KKADVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV---- 154 (357)
T ss_pred CCCCEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH----
Confidence 45699999986544332222222 46778888886432211110 011112 22456788888887765554321
Q ss_pred HhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHH
Q 003029 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (856)
Q Consensus 309 ~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~ 388 (856)
. .....++.++|+|+|...|.+... .. ........++++|+++||+.+.||+..+++|++++
T Consensus 155 ~------------~~~~~~~~~i~~gi~~~~~~~~~~---~~---~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l 216 (357)
T cd03795 155 L------------RRFRDKVRVIPLGLDPARYPRPDA---LE---EAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAAL 216 (357)
T ss_pred h------------cCCccceEEecCCCChhhcCCcch---hh---hHhhcCCCCCcEEEEecccccccCHHHHHHHHHhc
Confidence 1 111257889999999987764311 00 01111124678999999999999999999999886
Q ss_pred HHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 003029 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (856)
Q Consensus 389 l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~ 468 (856)
. ++.|+++|. ++.. ..+.+++.+.+.. ..|+ +.|.++.+++..+|+.||++++||.
T Consensus 217 ~--------~~~l~i~G~-----g~~~----~~~~~~~~~~~~~------~~V~-~~g~v~~~~~~~~~~~ad~~i~ps~ 272 (357)
T cd03795 217 P--------DAPLVIVGE-----GPLE----AELEALAAALGLL------DRVR-FLGRLDDEEKAALLAACDVFVFPSV 272 (357)
T ss_pred c--------CcEEEEEeC-----ChhH----HHHHHHHHhcCCc------ceEE-EcCCCCHHHHHHHHHhCCEEEeCCc
Confidence 4 366887763 2322 2333443332211 1355 5899999999999999999999996
Q ss_pred --CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc---cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 003029 469 --RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 543 (856)
Q Consensus 469 --~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l---g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v 543 (856)
.||||++++|||+|+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++++ +++.++.+++++++
T Consensus 273 ~~~e~~g~~~~Ea~~~g----~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~ 347 (357)
T cd03795 273 ERSEAFGIVLLEAMAFG----KPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDP-ELRERLGEAARERA 347 (357)
T ss_pred ccccccchHHHHHHHcC----CCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHH
Confidence 599999999999994 899999999988876 45799999999999999999999865 57778888888887
Q ss_pred Hh
Q 003029 544 TT 545 (856)
Q Consensus 544 ~~ 545 (856)
.+
T Consensus 348 ~~ 349 (357)
T cd03795 348 EE 349 (357)
T ss_pred HH
Confidence 54
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.7e-19 Score=186.47 Aligned_cols=188 Identities=17% Similarity=0.216 Sum_probs=125.4
Q ss_pred EEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEeeCceE
Q 003029 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGMF 671 (856)
Q Consensus 594 I~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliaenG~~ 671 (856)
|++|+||||+++ ...++++++++|++|.+ .|+.|+++|||+...+.+++..++ .++|++||++
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~ 65 (225)
T TIGR01482 1 IASDIDGTLTDP--------------NRAINESALEAIRKAES-VGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGE 65 (225)
T ss_pred CeEeccCccCCC--------------CcccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcE
Confidence 689999999986 34689999999999986 799999999999999998888774 5799999999
Q ss_pred EEecCC---eeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCC
Q 003029 672 LRCTTG---KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 748 (856)
Q Consensus 672 i~~~~~---~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~ 748 (856)
|...+. .|...+ +..|................-.+. .+..........+++ ...++.+++ .
T Consensus 66 i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~-~----- 129 (225)
T TIGR01482 66 ISYNEGMDDIFLAYL----EEEWFLDIVIAKTFPFSRLKVQYP--RRASLVKMRYGIDVD----TVREIIKEL-G----- 129 (225)
T ss_pred EEeCCCCceEEeccc----CHHHHHHHHHhcccchhhhccccc--cccceEEEeecCCHH----HHHHHHHhc-C-----
Confidence 986332 244322 333432221111000000000000 011111111111222 123333333 1
Q ss_pred CCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC
Q 003029 749 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 749 ~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
..+.+..+..++||.|+++|||.|+++++++++ ++.+++++||| +.||++| |+.+ +.+|.++|.
T Consensus 130 ~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~------i~~~~~i~~GD-~~NDi~m-~~~a---g~~vam~Na 193 (225)
T TIGR01482 130 LNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLG------IKPGETLVCGD-SENDIDL-FEVP---GFGVAVANA 193 (225)
T ss_pred ceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhC------CCHHHEEEECC-CHhhHHH-HHhc---CceEEcCCh
Confidence 123333556799999999999999999999999 66899999999 9999999 8865 778999875
|
catalyze the same reaction as SPP. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.2e-19 Score=191.66 Aligned_cols=201 Identities=16% Similarity=0.245 Sum_probs=135.7
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC----ceEEe
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----LWLAA 666 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~----lglia 666 (856)
+.+|++|+||||++..+ .+.+.+|++.++|+++.+ +|+.++++|||+...+..+...++ ..+|+
T Consensus 1 ~~li~tDlDGTLl~~~~-----------~~~~~~~~~~~~i~~~~~-~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~ 68 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTD-----------GDNQALLRLNALLEDHRG-EDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVT 68 (249)
T ss_pred CeEEEEcCCCcCcCCCC-----------CChHHHHHHHHHHHHhhc-cCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEE
Confidence 35899999999998421 134578999999999986 799999999999999998876553 35899
Q ss_pred eCceEEEecCC-----eeeecccccCChHHH-HHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHH
Q 003029 667 ENGMFLRCTTG-----KWMTTMPEHLNMEWV-DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQH 740 (856)
Q Consensus 667 enG~~i~~~~~-----~w~~~~~~~~~~~w~-~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~ 740 (856)
+||+.|..++. .|.... ...|. +.+..+...+...++......+...+.+.+...+ ......++.+.
T Consensus 69 ~NGa~I~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~---~~~~~~~l~~~ 141 (249)
T TIGR01485 69 SVGSEIYYGGAEVPDQHWAEYL----SEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEA---APEVIKQLTEM 141 (249)
T ss_pred cCCceEEeCCCCcCCHHHHHHH----hcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechhh---hhHHHHHHHHH
Confidence 99999986431 122111 22233 3344444444444444434444455555543211 01112233333
Q ss_pred HhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEE
Q 003029 741 LWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVR 819 (856)
Q Consensus 741 L~~~~~~~~~v~v-~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~ 819 (856)
+ ... ...+.+ ..+..++||+|++++||.|+++++++++ ++.+.+++||| +.||++| |+.+. +.+|.
T Consensus 142 l-~~~--~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~------i~~~~~i~~GD-~~ND~~m-l~~~~--~~~va 208 (249)
T TIGR01485 142 L-KET--GLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKLA------MEPSQTLVCGD-SGNDIEL-FEIGS--VRGVI 208 (249)
T ss_pred H-Hhc--CCCEEEEEECCceEEEEeCCCChHHHHHHHHHHcC------CCccCEEEEEC-ChhHHHH-HHccC--CcEEE
Confidence 3 221 223443 5577899999999999999999999999 67899999999 9999999 87642 45777
Q ss_pred eCCC
Q 003029 820 LDSS 823 (856)
Q Consensus 820 V~~~ 823 (856)
|+|.
T Consensus 209 ~~na 212 (249)
T TIGR01485 209 VSNA 212 (249)
T ss_pred ECCC
Confidence 7764
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.9e-18 Score=186.21 Aligned_cols=242 Identities=19% Similarity=0.141 Sum_probs=166.3
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (856)
..|+|++|+....++ . .+..+.++.+++|..++... ..........+.+.+-+......+.
T Consensus 87 ~~Divh~~~~~~~~~--~--~~~~~~~~v~~~h~~~~~~~--------~~~~~~~~~~~~~~~~s~~~~~~~~------- 147 (335)
T cd03802 87 DFDIVHNHSLHLPLP--F--ARPLPVPVVTTLHGPPDPEL--------LKLYYAARPDVPFVSISDAQRRPWP------- 147 (335)
T ss_pred CCCEEEecCcccchh--h--hcccCCCEEEEecCCCCccc--------chHHHhhCcCCeEEEecHHHHhhcc-------
Confidence 369999999887766 2 23456789999998754221 1123344455555544433222111
Q ss_pred CcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHH
Q 003029 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (856)
Q Consensus 311 g~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~ 390 (856)
.. .++.++|+|||++.|.+. ..++.+|+++||+.+.||+..+++|+.+
T Consensus 148 ------------~~-~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~--- 195 (335)
T cd03802 148 ------------PL-PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPHLAIRAARR--- 195 (335)
T ss_pred ------------cc-cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHHHHHHHHHh---
Confidence 01 468899999999888641 1246789999999999999999999754
Q ss_pred hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-C
Q 003029 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-R 469 (856)
Q Consensus 391 ~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~-~ 469 (856)
++ +.|+++|... ..+ .+...+.+... ++ ..|. +.|.++.+++..+|+.||++++||. .
T Consensus 196 --~~----~~l~i~G~~~---~~~--~~~~~~~~~~~-~~--------~~v~-~~G~~~~~~~~~~~~~~d~~v~ps~~~ 254 (335)
T cd03802 196 --AG----IPLKLAGPVS---DPD--YFYREIAPELL-DG--------PDIE-YLGEVGGAEKAELLGNARALLFPILWE 254 (335)
T ss_pred --cC----CeEEEEeCCC---CHH--HHHHHHHHhcc-cC--------CcEE-EeCCCCHHHHHHHHHhCcEEEeCCccc
Confidence 23 4577777432 111 22222222210 11 1355 4899999999999999999999998 5
Q ss_pred cCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHH-HHhc
Q 003029 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VTTH 546 (856)
Q Consensus 470 EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~-v~~~ 546 (856)
||||++++|||||+ .|+|+|+.+|..+.+ |.+|+++++ +++++++|.+++..+.+ +.++. .+++
T Consensus 255 E~~~~~~lEAma~G----~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~~~-------~~~~~~~~~~ 321 (335)
T cd03802 255 EPFGLVMIEAMACG----TPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLDRA-------ACRRRAERRF 321 (335)
T ss_pred CCcchHHHHHHhcC----CCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccHHH-------HHHHHHHHhC
Confidence 99999999999994 899999999999888 347999987 99999999999765431 12222 3667
Q ss_pred CHHHHHHHHHH
Q 003029 547 TAQEWAETFVS 557 (856)
Q Consensus 547 ~~~~W~~~fl~ 557 (856)
++..-++++++
T Consensus 322 s~~~~~~~~~~ 332 (335)
T cd03802 322 SAARMVDDYLA 332 (335)
T ss_pred CHHHHHHHHHH
Confidence 77766666654
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-18 Score=186.87 Aligned_cols=197 Identities=16% Similarity=0.249 Sum_probs=128.8
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEeeCce
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGM 670 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliaenG~ 670 (856)
||++|+||||++. ...++++++++|++|.+ .|+.|+|+|||+...+.+.+..++ .++|+.||+
T Consensus 1 li~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR00099 1 LIFIDLDGTLLND--------------DHTISPSTKEALAKLRE-KGIKVVLATGRPYKEVKNILKELGLDTPFITANGA 65 (256)
T ss_pred CEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCc
Confidence 5899999999986 35689999999999986 699999999999999999998884 479999999
Q ss_pred EEEecC-Ce-eeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEE-------------Eeec----CChh---
Q 003029 671 FLRCTT-GK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVW-------------NYKY----ADVE--- 728 (856)
Q Consensus 671 ~i~~~~-~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~-------------~y~~----~d~e--- 728 (856)
.+...+ +. +.. .++ .+.+.++++......-...+...+..... .+.. .+.+
T Consensus 66 ~i~~~~~~~i~~~----~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (256)
T TIGR00099 66 AVIDDQGEILYKK----PLD---LDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLP 138 (256)
T ss_pred EEECCCCCEEeec----CCC---HHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhh
Confidence 998642 21 332 233 34445555443322111111111000000 0000 0000
Q ss_pred ---h-------hHHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEe
Q 003029 729 ---F-------GRIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (856)
Q Consensus 729 ---~-------~~~qa~el~~~L~~~~~~~~~v~v-~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~G 797 (856)
+ ......++.+.+ ........+.+ .++..++||.|+++|||.|++.++++++ +++++++|||
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~------~~~~~~~~~G 211 (256)
T TIGR00099 139 DDILKILLLFLDPEDLDLLIEAL-NKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEALG------ISLEDVIAFG 211 (256)
T ss_pred cccceEEEEECCHHHHHHHHHHh-hhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHcC------CCHHHEEEeC
Confidence 0 001112333333 21000123554 4567899999999999999999999998 6789999999
Q ss_pred cCCcccccccccccccCcceEEeCCC
Q 003029 798 HFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 798 D~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
| +.||++| |+.+ +.+|.+++.
T Consensus 212 D-~~nD~~m-~~~~---~~~~a~~na 232 (256)
T TIGR00099 212 D-GMNDIEM-LEAA---GYGVAMGNA 232 (256)
T ss_pred C-cHHhHHH-HHhC---CceeEecCc
Confidence 9 9999999 8876 466777653
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-17 Score=185.23 Aligned_cols=268 Identities=16% Similarity=0.054 Sum_probs=179.6
Q ss_pred CCCEEEEeCccch--hHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHH-----HHhhcCCEEEEeCHHHHHHHH
Q 003029 231 DGDVVWCHDYHLM--FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-----RAVLAADLVGFHTYDYARHFV 303 (856)
Q Consensus 231 ~~DvIwvHDyhl~--llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il-----~~ll~aDlIgf~t~~~~~~Fl 303 (856)
..|+++||..... .+..+++. .+.++.+.+|..-.....+.. + ...++ ..+..+|.|...+....+.+.
T Consensus 84 ~~~~~~i~~~~~~~~~~~~~~~~--~~~~~v~~~h~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~ 159 (363)
T cd04955 84 KRDIDHVHALGPAIAPFLPLLRL--KGKKVVVNMDGLEWKRAKWGR-P-AKRYLKFGEKLAVKFADRLIADSPGIKEYLK 159 (363)
T ss_pred cCCeEEEEecCccHHHHHHHHHh--cCCCEEEEccCcceeeccccc-c-hhHHHHHHHHHHHhhccEEEeCCHHHHHHHH
Confidence 3467777765544 33333333 367888888863111111110 0 11111 134568888887765444432
Q ss_pred HHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHH--hcCCceEEEeecccccCChHHH
Q 003029 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQET--FAGRKVMLGVDRLDMIKGIPQK 381 (856)
Q Consensus 304 ~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~--~~~~~iIl~V~Rld~~KGi~~~ 381 (856)
. ..+ ... .++|+|+|...+.+. ...++. +.+++.++++||+.+.||+..+
T Consensus 160 ~----~~~------------~~~--~~i~ngv~~~~~~~~----------~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~l 211 (363)
T cd04955 160 E----KYG------------RDS--TYIPYGADHVVSSEE----------DEILKKYGLEPGRYYLLVGRIVPENNIDDL 211 (363)
T ss_pred H----hcC------------CCC--eeeCCCcChhhcchh----------hhhHHhcCCCCCcEEEEEecccccCCHHHH
Confidence 1 111 111 789999998766430 011122 2355678999999999999999
Q ss_pred HHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 003029 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (856)
Q Consensus 382 L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~AD 461 (856)
++|+..+.. ++.|+++|..... ..+.+.+.+. .+. ...|+ +.|.++.+++..+|+.||
T Consensus 212 i~a~~~l~~-------~~~l~ivG~~~~~-----~~~~~~~~~~-------~~~--~~~V~-~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 212 IEAFSKSNS-------GKKLVIVGNADHN-----TPYGKLLKEK-------AAA--DPRII-FVGPIYDQELLELLRYAA 269 (363)
T ss_pred HHHHHhhcc-------CceEEEEcCCCCc-----chHHHHHHHH-------hCC--CCcEE-EccccChHHHHHHHHhCC
Confidence 999987632 3568888754211 1233333321 111 11355 489999999999999999
Q ss_pred EEEECCCC-cCCChhHHHHHhhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 003029 462 VALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (856)
Q Consensus 462 v~v~~S~~-EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~ 540 (856)
++++||.. ||||++++|||||+ .|+|+|..+|..+.++.+|.+++|.|. +|++|.++++++ +.+.++.++.+
T Consensus 270 ~~v~ps~~~e~~~~~~~EAma~G----~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~~~~-~~~~~~~~~~~ 342 (363)
T cd04955 270 LFYLHGHSVGGTNPSLLEAMAYG----CPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEELEADP-EEVSAMAKAAR 342 (363)
T ss_pred EEEeCCccCCCCChHHHHHHHcC----CCEEEecCCccceeecCCeeEecCchH--HHHHHHHHHhCH-HHHHHHHHHHH
Confidence 99999999 99999999999994 899999999988888778999988776 999999999976 46667777778
Q ss_pred HHHH-hcCHHHHHHHHHHHH
Q 003029 541 THVT-THTAQEWAETFVSEL 559 (856)
Q Consensus 541 ~~v~-~~~~~~W~~~fl~~l 559 (856)
+.+. .+++..=++++++.+
T Consensus 343 ~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 343 ERIREKYTWEKIADQYEELY 362 (363)
T ss_pred HHHHHhCCHHHHHHHHHHHh
Confidence 7775 488888787777644
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.2e-18 Score=187.26 Aligned_cols=248 Identities=20% Similarity=0.180 Sum_probs=169.1
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCC----ch-hhhhcCccc-------------HHHHHHhhcCCEE
Q 003029 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP----SS-EIHRTLPSR-------------SDLLRAVLAADLV 291 (856)
Q Consensus 230 ~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP----~~-e~fr~lp~~-------------~~il~~ll~aDlI 291 (856)
.+.|+|+++..... ...+ ..+..+..+++|.|.+ .. ......+.. ....+.+..+|.|
T Consensus 82 ~~~D~v~~~~~~~~--~~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 82 SGYDLVISSSHAVA--KGVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred cCCCEEEEcCcHHh--cccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 35789877653222 1112 3456778888898631 11 111111100 0112234678888
Q ss_pred EEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeec
Q 003029 292 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR 371 (856)
Q Consensus 292 gf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~R 371 (856)
...+....+.+.+ ..+ . +..++|+|+|.+.|.+.. ...++++++||
T Consensus 158 i~~S~~~~~~~~~----~~~------------~--~~~vi~~~~d~~~~~~~~----------------~~~~~il~~G~ 203 (351)
T cd03804 158 IANSRFVARRIKK----YYG------------R--DATVIYPPVDTDRFTPAE----------------EKEDYYLSVGR 203 (351)
T ss_pred EECCHHHHHHHHH----HhC------------C--CcEEECCCCCHhhcCcCC----------------CCCCEEEEEEc
Confidence 8887766555532 111 1 246789999998775421 23567999999
Q ss_pred ccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHH
Q 003029 372 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFP 451 (856)
Q Consensus 372 ld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~ 451 (856)
+.+.||++.+++|++++ | +.|+++|. +++...+++ ... ..|.| .|.++.+
T Consensus 204 ~~~~K~~~~li~a~~~~----~-----~~l~ivG~-----g~~~~~l~~-------~~~--------~~V~~-~g~~~~~ 253 (351)
T cd03804 204 LVPYKRIDLAIEAFNKL----G-----KRLVVIGD-----GPELDRLRA-------KAG--------PNVTF-LGRVSDE 253 (351)
T ss_pred CccccChHHHHHHHHHC----C-----CcEEEEEC-----ChhHHHHHh-------hcC--------CCEEE-ecCCCHH
Confidence 99999999999999865 3 33777763 333323322 110 13664 8999999
Q ss_pred HHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCH
Q 003029 452 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSP 529 (856)
Q Consensus 452 el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~ 529 (856)
++.++|+.||++++||. ||||++++|||||+ .|+|+|..+|..+.+ +.+|++++|.|++++|++|.++++++.
T Consensus 254 ~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G----~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~ 328 (351)
T cd03804 254 ELRDLYARARAFLFPAE-EDFGIVPVEAMASG----TPVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKNED 328 (351)
T ss_pred HHHHHHHhCCEEEECCc-CCCCchHHHHHHcC----CCEEEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcc
Confidence 99999999999999999 99999999999994 899999999988877 457999999999999999999998774
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHH
Q 003029 530 EEREKRHWHNFTHVTTHTAQEWAET 554 (856)
Q Consensus 530 ~er~~r~~~~~~~v~~~~~~~W~~~ 554 (856)
...+.+++.+..+++.+..++
T Consensus 329 ----~~~~~~~~~~~~~~~~~~~~~ 349 (351)
T cd03804 329 ----FDPQAIRAHAERFSESRFREK 349 (351)
T ss_pred ----cCHHHHHHHHHhcCHHHHHHH
Confidence 122334555566776665554
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-18 Score=181.92 Aligned_cols=188 Identities=15% Similarity=0.139 Sum_probs=121.8
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC---ceEEeeCc
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN---LWLAAENG 669 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~---lgliaenG 669 (856)
+|++|+||||+++. ..+++.++++|++|.+ +|+.|+|+|||+...+..++..++ .++||+||
T Consensus 1 ~i~~DlDGTLL~~~--------------~~~~~~~~~~l~~l~~-~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NG 65 (221)
T TIGR02463 1 WVFSDLDGTLLDSH--------------SYDWQPAAPWLTRLQE-AGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENG 65 (221)
T ss_pred CEEEeCCCCCcCCC--------------CCCcHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCC
Confidence 58999999999862 3345559999999986 799999999999999999999885 46999999
Q ss_pred eEEEecCCeeee-----cccccCChHHHHHHHHHHHHHHhcCCCc-EEee-----------------------ecceEEE
Q 003029 670 MFLRCTTGKWMT-----TMPEHLNMEWVDSLKHVFEYFTERTPRS-HFEQ-----------------------RETSLVW 720 (856)
Q Consensus 670 ~~i~~~~~~w~~-----~~~~~~~~~w~~~v~~i~~~~~~rt~gs-~ie~-----------------------k~~si~~ 720 (856)
+.|.... .|+. ......+ | +.+.++++...+...-. +... ......+
T Consensus 66 a~i~~~~-~~~~~~~~~~~~~~~~--~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (221)
T TIGR02463 66 AAIHLEE-LWREEPGYPRIILGIS--Y-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPL 141 (221)
T ss_pred cEEEcCc-ccccCCCceEEecCCC--H-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccE
Confidence 9998521 1110 0001122 2 44555554332210000 0000 0000111
Q ss_pred EeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCC
Q 003029 721 NYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL 800 (856)
Q Consensus 721 ~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~ 800 (856)
... .+++ ...++.+.+ .. ..+.+..+..++||.|++++||.|++++++++| +++++++|||| +
T Consensus 142 ~~~-~~~~----~~~~~~~~l-~~----~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~lg------i~~~~vi~~GD-~ 204 (221)
T TIGR02463 142 LWR-DSDS----RMPRFTALL-AD----LGLAIVQGNRFSHVLGASSSKGKAANWLKATYN------QPDVKTLGLGD-G 204 (221)
T ss_pred Eec-Cchh----HHHHHHHHH-HH----cCCeEEecCCeeEEecCCCCHHHHHHHHHHHhC------CCCCcEEEECC-C
Confidence 110 0111 112222223 21 245666677899999999999999999999999 67899999999 9
Q ss_pred cccccccccccccCcceEEe
Q 003029 801 GKNCNLPLQFLMQTISTVRL 820 (856)
Q Consensus 801 ~nDe~M~f~~~~~~~~~v~V 820 (856)
.||++| |+++ +.+|.|
T Consensus 205 ~NDi~m-l~~a---g~~va~ 220 (221)
T TIGR02463 205 PNDLPL-LEVA---DYAVVI 220 (221)
T ss_pred HHHHHH-HHhC---CceEEe
Confidence 999999 8876 445544
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.3e-18 Score=179.61 Aligned_cols=189 Identities=14% Similarity=0.211 Sum_probs=124.8
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEeeC
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliaen 668 (856)
+|+|++|+||||++. +..++++++++|++|++ +|+.|+|+|||++..+..++..++ .++|++|
T Consensus 1 ik~v~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~-~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~N 65 (215)
T TIGR01487 1 IKLVAIDIDGTLTEP--------------NRMISERAIEAIRKAEK-KGIPVSLVTGNTVPFARALAVLIGTSGPVVAEN 65 (215)
T ss_pred CcEEEEecCCCcCCC--------------CcccCHHHHHHHHHHHH-CCCEEEEEcCCcchhHHHHHHHhCCCCcEEEcc
Confidence 479999999999976 45699999999999986 799999999999999999988884 3799999
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCC
Q 003029 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 748 (856)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~ 748 (856)
|+++...++. ....+ ....|...-... ..+....-...+. .....+... ... ...+...+ ..
T Consensus 66 Ga~i~~~~~~-~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~--~~~-----~~~~~~~l-~~---- 127 (215)
T TIGR01487 66 GGVIFYNKED-IFLAN--MEEEWFLDEEKK-KRFPRDRLSNEYP--RASLVIMRE--GKD-----VDEVREII-KE---- 127 (215)
T ss_pred CcEEEeCCCc-EEEec--ccchhhHHHhhh-hhhhhhhcccccc--eeEEEEecC--Ccc-----HHHHHHHH-Hh----
Confidence 9999864322 11111 111111100000 0010000000000 011111111 111 11223333 21
Q ss_pred CCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC
Q 003029 749 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 749 ~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
..+.+..+...+||.|.+++||.|+++++++++ ++.+++++||| +.||++| |+.+ +.+|.++|.
T Consensus 128 ~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~------i~~~~~i~iGD-s~ND~~m-l~~a---g~~vam~na 191 (215)
T TIGR01487 128 RGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLG------IKPEEVAAIGD-SENDIDL-FRVV---GFKVAVANA 191 (215)
T ss_pred CCeEEEecCceEEEecCCCChHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHH-HHhC---CCeEEcCCc
Confidence 245555566789999999999999999999999 56789999999 9999999 8866 678888775
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-17 Score=180.79 Aligned_cols=246 Identities=20% Similarity=0.151 Sum_probs=167.7
Q ss_pred CCCEEEEeCc-cchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDY-HLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (856)
Q Consensus 231 ~~DvIwvHDy-hl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (856)
..|+|++|++ ...++..+.+. . +.++.+.+|..++.... ...+........+..+|.+.+.+....+.+...
T Consensus 81 ~~dii~~~~~~~~~~~~~~~~~-~-~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~---- 153 (353)
T cd03811 81 KPDVVISHLTTTPNVLALLAAR-L-GTKLIVWEHNSLSLELK-RKLRLLLLIRKLYRRADKIVAVSEGVKEDLLKL---- 153 (353)
T ss_pred CCCEEEEcCccchhHHHHHHhh-c-CCceEEEEcCcchhhhc-cchhHHHHHHhhccccceEEEeccchhhhHHHh----
Confidence 4699999998 44444444433 3 78999999987653221 111111123334567888888877655554431
Q ss_pred hCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHH
Q 003029 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (856)
Q Consensus 310 lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l 389 (856)
.+. ...++.++|+|+|.+.+.+.... .. .+ ....++.+|+++||+.+.||+..+++|+..+.
T Consensus 154 ~~~-----------~~~~~~vi~~~~~~~~~~~~~~~-----~~-~~-~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 154 LGI-----------PPDKIEVIYNPIDIEEIRALAEE-----PL-EL-GIPPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred hcC-----------CccccEEecCCcChhhcCcccch-----hh-hc-CCCCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 110 14578899999998877643211 00 00 11246789999999999999999999999998
Q ss_pred HhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 003029 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 469 (856)
Q Consensus 390 ~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~ 469 (856)
++++++ .|+++|.+ +....++ +++.+.+.. ..|. +.+.+ +++..+|+.||++++||..
T Consensus 216 ~~~~~~----~l~i~G~~-----~~~~~~~----~~~~~~~~~------~~v~-~~g~~--~~~~~~~~~~d~~i~ps~~ 273 (353)
T cd03811 216 KEGPDA----RLVILGDG-----PLREELE----ALAKELGLA------DRVH-FLGFQ--SNPYPYLKAADLFVLSSRY 273 (353)
T ss_pred hcCCCc----eEEEEcCC-----ccHHHHH----HHHHhcCCC------ccEE-Eeccc--CCHHHHHHhCCEEEeCccc
Confidence 776654 47777632 2222333 344343321 1244 46664 4688999999999999999
Q ss_pred cCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHH---HHHHHHHHcC
Q 003029 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEV---ANAIARALNM 527 (856)
Q Consensus 470 EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~l---A~ai~~aL~~ 527 (856)
||||++++|||+|+ .|+|+|+.+|..+.+ +.+|+++++.|.+++ +++|..++..
T Consensus 274 e~~~~~~~Ea~~~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 274 EGFPNVLLEAMALG----TPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLD 332 (353)
T ss_pred CCCCcHHHHHHHhC----CCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCC
Confidence 99999999999994 899999999999888 467999999999999 4555555544
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.7e-18 Score=182.95 Aligned_cols=192 Identities=16% Similarity=0.131 Sum_probs=127.7
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEeeCce
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGM 670 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliaenG~ 670 (856)
||++|+||||++.. ..+.+.++++|++|.+ .|+.|+++|||+...+.+++..++ .++|++||+
T Consensus 1 li~~DlDGTll~~~--------------~~~~~~~~~~i~~l~~-~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR01486 1 WIFTDLDGTLLDPH--------------GYDWGPAKEVLERLQE-LGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGG 65 (256)
T ss_pred CEEEcCCCCCcCCC--------------CcCchHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCe
Confidence 58999999999862 2133468999999986 799999999999999999999885 489999999
Q ss_pred EEEecCCe------eeecccccCChHHHHHHHHHHHHHHhcCCCcEEe-eecc--------e-------EEEE--eecC-
Q 003029 671 FLRCTTGK------WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFE-QRET--------S-------LVWN--YKYA- 725 (856)
Q Consensus 671 ~i~~~~~~------w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie-~k~~--------s-------i~~~--y~~~- 725 (856)
+|...++. |. .....+ .+.+.++++.+..+.+..+.. .... . .... +...
T Consensus 66 ~i~~~~~~~~~~~~~~--~~~~i~---~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (256)
T TIGR01486 66 AIYGPRGWFTEPEYPV--IALGIP---YEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETI 140 (256)
T ss_pred EEEeCCCcccCCCeEE--EEcCCC---HHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCce
Confidence 99863321 21 111223 256666666543321111100 0000 0 0000 0000
Q ss_pred --ChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCC--cceEEEEecCCc
Q 003029 726 --DVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTA--IDYVLCIGHFLG 801 (856)
Q Consensus 726 --d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~--~d~vla~GD~~~ 801 (856)
+++ ....+.+.+ . ...+.+..+..++||.|+++|||.|+++++++++ ++ .+++++||| +.
T Consensus 141 ~~~~~----~~~~~~~~~-~----~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~~------i~~~~~~~~a~GD-~~ 204 (256)
T TIGR01486 141 LWSEE----RRERFTEAL-V----ELGLEVTHGNRFYHVLGAGSDKGKAANALKQFYN------QPGGAIKVVGLGD-SP 204 (256)
T ss_pred ecChH----HHHHHHHHH-H----HcCCEEEeCCceEEEecCCCCHHHHHHHHHHHHh------hcCCCceEEEEcC-CH
Confidence 011 111222222 2 2245666666799999999999999999999998 56 889999999 99
Q ss_pred ccccccccccccCcceEEeCCCC
Q 003029 802 KNCNLPLQFLMQTISTVRLDSSF 824 (856)
Q Consensus 802 nDe~M~f~~~~~~~~~v~V~~~~ 824 (856)
||++| |+.+ +.+|.++|..
T Consensus 205 ND~~M-l~~a---g~~vam~Na~ 223 (256)
T TIGR01486 205 NDLPL-LEVV---DLAVVVPGPN 223 (256)
T ss_pred hhHHH-HHHC---CEEEEeCCCC
Confidence 99999 8865 7888887753
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.8e-17 Score=181.62 Aligned_cols=196 Identities=21% Similarity=0.303 Sum_probs=148.3
Q ss_pred EEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccc--cCChHHHHHHHHHHHHh-CcCccCce
Q 003029 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDM--IKGIPQKLLAFEKFLEE-NSDWRGKV 399 (856)
Q Consensus 326 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~--~KGi~~~L~Af~~~l~~-~P~~~~~v 399 (856)
.++.++|+|||.+.|.+.. . ...++.+ .++++++++++... .||+..+++|++.+.++ .|+ +
T Consensus 159 ~~~~vi~ngi~~~~~~~~~-----~---~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~----~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPRD-----K---REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDD----I 226 (365)
T ss_pred CceEEeCCCCcccccCCCc-----H---HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCC----e
Confidence 5788999999998875431 1 1223333 34566766767654 89999999999988665 343 5
Q ss_pred EEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCC-HHHHHHHHHHccEEEECCCCcCCChhHHH
Q 003029 400 VLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLD-FPALCALYAVTDVALVTSLRDGMNLVSYE 478 (856)
Q Consensus 400 ~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~-~~el~aly~~ADv~v~~S~~EG~~Lv~lE 478 (856)
.++++|... ... . . .++ ..|. +.|.++ .+++..+|+.||++++||..||||++++|
T Consensus 227 ~~~i~G~~~-----~~~----~--~---~~~--------~~v~-~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGASD-----PEI----P--P---DLP--------FPVH-YLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCCc-----hhh----h--c---cCC--------CceE-ecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 577776422 100 0 0 111 1255 478888 88999999999999999999999999999
Q ss_pred HHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHH
Q 003029 479 FVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETF 555 (856)
Q Consensus 479 ama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~f 555 (856)
||+| +.|+|+|+.+|..+.+ +.+|+++++.|++++|++|.++++.+ +++.++.+++++.+ ..++++..++.+
T Consensus 284 am~~----g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~ 358 (365)
T cd03825 284 ALAC----GTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAARELAENEFDSRVQAKRY 358 (365)
T ss_pred HHhc----CCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 9999 4899999999988888 34799999999999999999999865 46777777788877 568999999988
Q ss_pred HHHHHH
Q 003029 556 VSELND 561 (856)
Q Consensus 556 l~~l~~ 561 (856)
++-+++
T Consensus 359 ~~~y~~ 364 (365)
T cd03825 359 LSLYEE 364 (365)
T ss_pred HHHHhh
Confidence 876653
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.3e-18 Score=180.16 Aligned_cols=191 Identities=16% Similarity=0.200 Sum_probs=127.5
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc----eEEeeC
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL----WLAAEN 668 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l----gliaen 668 (856)
||++|+||||+++ +..+++.+ ++|+ +. ++|+.++|+|||+...+.+.++.+++ .+|++|
T Consensus 1 li~~DlDgTLl~~--------------~~~~~~~~-~~~~-~~-~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~n 63 (236)
T TIGR02471 1 LIITDLDNTLLGD--------------DEGLASFV-ELLR-GS-GDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARV 63 (236)
T ss_pred CeEEeccccccCC--------------HHHHHHHH-HHHH-hc-CCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECC
Confidence 5899999999985 34466655 7777 44 57999999999999999999988743 499999
Q ss_pred ceEEEecCC-----eeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecc--eEEEEeecCChhhhHHHHHHHHHHH
Q 003029 669 GMFLRCTTG-----KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRET--SLVWNYKYADVEFGRIQARDMLQHL 741 (856)
Q Consensus 669 G~~i~~~~~-----~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~--si~~~y~~~d~e~~~~qa~el~~~L 741 (856)
|+.|..... .|... ....|.. ..+ ..+....+|..++.+.. ...++|+.. ++.. ....++.+.+
T Consensus 64 Ga~i~~~~~~~~~~~~~~~----~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~~~~~~~~l 134 (236)
T TIGR02471 64 GTEIYYGPELQPDRFWQKH----IDHDWRR--QAV-VEALADIPGLTLQDDQEQGPFKISYLLD-PEGE-PILPQIRQRL 134 (236)
T ss_pred CceEEeCCCCCCChhHHHH----HhcCCCH--HHH-HHHHhcCCCcEeCChhcCCCeeEEEEEC-cccc-hHHHHHHHHH
Confidence 999864211 12110 0111111 112 23333456655554432 345566543 2111 1122334444
Q ss_pred hcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEe
Q 003029 742 WTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRL 820 (856)
Q Consensus 742 ~~~~~~~~~v~v-~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V 820 (856)
... ...+.+ ..+..++||.|+++|||.|++.|+++++ ++++++++||| +.||++| |+.+ +.+|.|
T Consensus 135 -~~~--~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g------~~~~~~i~~GD-~~nD~~m-l~~~---~~~iav 200 (236)
T TIGR02471 135 -RQQ--SQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWG------LPLEQILVAGD-SGNDEEM-LRGL---TLGVVV 200 (236)
T ss_pred -Hhc--cCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhC------CCHHHEEEEcC-CccHHHH-HcCC---CcEEEE
Confidence 222 123444 4456789999999999999999999999 56889999999 9999999 8865 788889
Q ss_pred CCC
Q 003029 821 DSS 823 (856)
Q Consensus 821 ~~~ 823 (856)
++.
T Consensus 201 ~na 203 (236)
T TIGR02471 201 GNH 203 (236)
T ss_pred cCC
Confidence 875
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.4e-17 Score=182.69 Aligned_cols=242 Identities=12% Similarity=-0.011 Sum_probs=159.0
Q ss_pred CCCCEEEEeCccchh--HHHHHHhcCCCCeEEEEEecCCCchhhhhcC--cc----cHHHHHH-hhcCCEEEEeCHHHHH
Q 003029 230 KDGDVVWCHDYHLMF--LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL--PS----RSDLLRA-VLAADLVGFHTYDYAR 300 (856)
Q Consensus 230 ~~~DvIwvHDyhl~l--lp~~lr~~~~~~~i~~flH~PfP~~e~fr~l--p~----~~~il~~-ll~aDlIgf~t~~~~~ 300 (856)
...|+|++|..+.+. ++..+-.+..+.|+.+.+|..+.+.-..... +. ...+.+. .-.+|.|...+....+
T Consensus 99 ~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~~~~~ 178 (371)
T PLN02275 99 PRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAMQH 178 (371)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCHHHHH
Confidence 356999999877532 2333323334678888888753211000000 00 0111122 2357888888876555
Q ss_pred HHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHH
Q 003029 301 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQ 380 (856)
Q Consensus 301 ~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~ 380 (856)
...+ ..| . ++.++|+|+ .+.|.+.... ..++ .+...+|+++||+.+.||+..
T Consensus 179 ~l~~----~~g------------~--~i~vi~n~~-~~~f~~~~~~-------~~~~--~~~~~~i~~~grl~~~k~~~~ 230 (371)
T PLN02275 179 ELDQ----NWG------------I--RATVLYDQP-PEFFRPASLE-------IRLR--PNRPALVVSSTSWTPDEDFGI 230 (371)
T ss_pred HHHH----hcC------------C--CeEEECCCC-HHHcCcCCch-------hccc--CCCcEEEEEeCceeccCCHHH
Confidence 4322 111 1 167889984 5677543210 0111 124467889999999999999
Q ss_pred HHHHHHHHHH-----------------hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEE
Q 003029 381 KLLAFEKFLE-----------------ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (856)
Q Consensus 381 ~L~Af~~~l~-----------------~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 443 (856)
+++|+..+.. .+|+ +.|+++|. |++..++++.+ .+.+. ..+++
T Consensus 231 li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG~-----G~~~~~l~~~~----~~~~l-------~~v~~ 290 (371)
T PLN02275 231 LLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITGK-----GPQKAMYEEKI----SRLNL-------RHVAF 290 (371)
T ss_pred HHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEeC-----CCCHHHHHHHH----HHcCC-------CceEE
Confidence 9999988742 2454 56888863 44444444444 33222 24777
Q ss_pred eCCCCCHHHHHHHHHHccEEEECC---CCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHH
Q 003029 444 LDRSLDFPALCALYAVTDVALVTS---LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 518 (856)
Q Consensus 444 ~~g~v~~~el~aly~~ADv~v~~S---~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA 518 (856)
+.+.++.+++..+|+.||+||+|+ ..|||+++++|||||+ .|+|+|..+|..+.+ |.+|++|+ |++++|
T Consensus 291 ~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G----~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la 364 (371)
T PLN02275 291 RTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCG----LPVCAVSYSCIGELVKDGKNGLLFS--SSSELA 364 (371)
T ss_pred EcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCC----CCEEEecCCChHHHccCCCCeEEEC--CHHHHH
Confidence 777899999999999999999853 2489999999999994 899999999988888 56899996 699999
Q ss_pred HHHHHHH
Q 003029 519 NAIARAL 525 (856)
Q Consensus 519 ~ai~~aL 525 (856)
++|.++|
T Consensus 365 ~~i~~l~ 371 (371)
T PLN02275 365 DQLLELL 371 (371)
T ss_pred HHHHHhC
Confidence 9998875
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.3e-17 Score=178.49 Aligned_cols=197 Identities=13% Similarity=0.138 Sum_probs=128.7
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc--eEEee
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAE 667 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--gliae 667 (856)
.+|+|++|+||||+++ ...+++.++++|++|.+ .|+.|+|+|||+...+...+..+++ ++|+.
T Consensus 3 ~~kli~~DlDGTLl~~--------------~~~~~~~~~~ai~~l~~-~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~ 67 (273)
T PRK00192 3 MKLLVFTDLDGTLLDH--------------HTYSYEPAKPALKALKE-KGIPVIPCTSKTAAEVEVLRKELGLEDPFIVE 67 (273)
T ss_pred cceEEEEcCcccCcCC--------------CCcCcHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEE
Confidence 4789999999999985 23467889999999986 7999999999999999999998853 79999
Q ss_pred CceEEEecCC--------------eeeecccccCChHHHHHHHHHHHHHHhcCCCcE-Eeee----cceEEEEee-----
Q 003029 668 NGMFLRCTTG--------------KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSH-FEQR----ETSLVWNYK----- 723 (856)
Q Consensus 668 nG~~i~~~~~--------------~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~-ie~k----~~si~~~y~----- 723 (856)
||++|...++ .|... ...+ .+.+.++++.+.......+ .... +.....++.
T Consensus 68 nGa~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (273)
T PRK00192 68 NGAAIYIPKNYFPFQPDGERLKGDYWVIE--LGPP---YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESAR 142 (273)
T ss_pred cCcEEEecccccccCCccccccCCceEEE--cCCC---HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHH
Confidence 9999985222 22211 1222 3455555544322111000 0000 000000000
Q ss_pred ---cCChh--h----hHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCc-ceE
Q 003029 724 ---YADVE--F----GRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAI-DYV 793 (856)
Q Consensus 724 ---~~d~e--~----~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~-d~v 793 (856)
..... + .......+...+ . ...+.+..++.++||.|.+ +||.|+++++++++ +++ +++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~l-~----~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~~------i~~~~~v 210 (273)
T PRK00192 143 LAKDREFSEPFLWNGSEAAKERFEEAL-K----RLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELYR------RQDGVET 210 (273)
T ss_pred HHHhcccCCceeecCchHHHHHHHHHH-H----HcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHHh------ccCCceE
Confidence 00000 0 001112222223 1 2346666677899999999 99999999999998 678 999
Q ss_pred EEEecCCcccccccccccccCcceEEeCCC
Q 003029 794 LCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 794 la~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
++||| +.||++| |+.+ +.+|.++|.
T Consensus 211 ~~~GD-s~NDi~m-~~~a---g~~vam~NA 235 (273)
T PRK00192 211 IALGD-SPNDLPM-LEAA---DIAVVVPGP 235 (273)
T ss_pred EEEcC-ChhhHHH-HHhC---CeeEEeCCC
Confidence 99999 9999999 8766 677777764
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.5e-17 Score=189.69 Aligned_cols=197 Identities=14% Similarity=0.157 Sum_probs=128.4
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEee
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAE 667 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliae 667 (856)
++|+||+|+||||++. ...++++++++|++|.+ +|+.|+++|||+...+..++..++ .++|++
T Consensus 415 ~~KLIfsDLDGTLLd~--------------d~~i~~~t~eAL~~L~e-kGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~e 479 (694)
T PRK14502 415 FKKIVYTDLDGTLLNP--------------LTYSYSTALDALRLLKD-KELPLVFCSAKTMGEQDLYRNELGIKDPFITE 479 (694)
T ss_pred eeeEEEEECcCCCcCC--------------CCccCHHHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEc
Confidence 6899999999999986 23466789999999986 799999999999999999998885 479999
Q ss_pred CceEEEecCCeee-------------ecccccCChHHHHHHHHHHHHHHhcCC----------CcEEeeecceEEEE---
Q 003029 668 NGMFLRCTTGKWM-------------TTMPEHLNMEWVDSLKHVFEYFTERTP----------RSHFEQRETSLVWN--- 721 (856)
Q Consensus 668 nG~~i~~~~~~w~-------------~~~~~~~~~~w~~~v~~i~~~~~~rt~----------gs~ie~k~~si~~~--- 721 (856)
||+.|...++ |. .+.....+ .+.+.++++...+... +.++.... ...++
T Consensus 480 NGA~I~~~~~-~~~~~~~~~~~~~~~iI~~~~l~---~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~-d~~~~ei~ 554 (694)
T PRK14502 480 NGGAIFIPKD-YFRLPFAYDRVAGNYLVIELGMA---YKDIRHILKKALAEACTEIENSEKAGNIFITSFG-DMSVEDVS 554 (694)
T ss_pred CCCEEEECCC-cccccccccccCCCeEEEEcCCC---HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCC-cccHHHHH
Confidence 9999986332 11 01111223 2344444443332110 11111100 00000
Q ss_pred -eecCChhh----------------h-HHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcC
Q 003029 722 -YKYADVEF----------------G-RIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHS 783 (856)
Q Consensus 722 -y~~~d~e~----------------~-~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~ 783 (856)
+.....+. + .....++.+.+ . ...+++..|..++||. .++|||.|++.|++.++
T Consensus 555 ~~TgL~~~~a~~a~~Re~seKIl~~gd~e~Leel~~~L-~----~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~~g-- 626 (694)
T PRK14502 555 RLTDLNLKQAELAKQREYSETVHIEGDKRSTNIVLNHI-Q----QSGLEYSFGGRFYEVT-GGNDKGKAIKILNELFR-- 626 (694)
T ss_pred HhhCCCHHHHHHHhhccCceeEEEcCCHHHHHHHHHHH-H----HcCcEEEECCEEEEeC-CCCCHHHHHHHHHHHhC--
Confidence 00000000 0 01122333333 2 2256677799999999 59999999999999998
Q ss_pred CcCCCCcceEEEE--ecCCcccccccccccccCcceEEeCCC
Q 003029 784 KKMKTAIDYVLCI--GHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 784 ~~~~~~~d~vla~--GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
++.+++++| || +.||++| |+++ +.+|.|++.
T Consensus 627 ----I~~~eViafalGD-s~NDisM-Le~A---g~gVAM~~~ 659 (694)
T PRK14502 627 ----LNFGNIHTFGLGD-SENDYSM-LETV---DSPILVQRP 659 (694)
T ss_pred ----CCccceEEEEcCC-cHhhHHH-HHhC---CceEEEcCC
Confidence 556788888 99 9999999 8877 567777543
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.74 E-value=1e-16 Score=170.15 Aligned_cols=194 Identities=16% Similarity=0.215 Sum_probs=127.1
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEeeC
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliaen 668 (856)
+|+||+|+||||+++ ....++.++++|++|.+ .|+.|+++|||+...+..+...++ .++|++|
T Consensus 1 ~KLIftDLDGTLLd~--------------~~~~~~~a~~aL~~Lk~-~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eN 65 (302)
T PRK12702 1 MRLVLSSLDGSLLDL--------------EFNSYGAARQALAALER-RSIPLVLYSLRTRAQLEHLCRQLRLEHPFICED 65 (302)
T ss_pred CcEEEEeCCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeC
Confidence 489999999999986 34577889999999996 799999999999999999999885 4899999
Q ss_pred ceEEEecCCeeeec-c-c---ccCChHH-------HHHHHHHHHHHHhcCCCcEE------------------------e
Q 003029 669 GMFLRCTTGKWMTT-M-P---EHLNMEW-------VDSLKHVFEYFTERTPRSHF------------------------E 712 (856)
Q Consensus 669 G~~i~~~~~~w~~~-~-~---~~~~~~w-------~~~v~~i~~~~~~rt~gs~i------------------------e 712 (856)
|+.|..... |... . + ...+..| ...++.+++.........+. .
T Consensus 66 GA~I~~p~~-~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~ 144 (302)
T PRK12702 66 GSAIYVPEH-YFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQ 144 (302)
T ss_pred CcEEEEccc-cccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHH
Confidence 999985322 3210 0 0 0011111 33444444433222111110 0
Q ss_pred eecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEe------------------C---CCCHHH
Q 003029 713 QRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRA------------------V---GVTKGA 771 (856)
Q Consensus 713 ~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p------------------~---gvnKG~ 771 (856)
.++.|-.+.+...+.. +.+.+ ....+.+++|..++.+.. . +++||.
T Consensus 145 ~Re~SEp~~w~~~~~~--------~~~~~-----~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~ 211 (302)
T PRK12702 145 KREYSEIFSYSGDPAR--------LREAF-----AQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQ 211 (302)
T ss_pred hccCCcceEecCCHHH--------HHHHH-----HHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHH
Confidence 1233333444332211 12222 223678888888887776 5 899999
Q ss_pred HHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC
Q 003029 772 AIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS 822 (856)
Q Consensus 772 av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~ 822 (856)
|++.|.+.+.... .++ .++++|| +.||++| ++++ .+.|.|.+
T Consensus 212 A~~~L~~~y~~~~---~~~-~tiaLGD-spND~~m-Le~~---D~~vvi~~ 253 (302)
T PRK12702 212 AVQLLLDCYQRHL---GPI-KALGIGC-SPPDLAF-LRWS---EQKVVLPS 253 (302)
T ss_pred HHHHHHHHHHhcc---CCc-eEEEecC-ChhhHHH-HHhC---CeeEEecC
Confidence 9999999987311 112 6899999 9999999 8877 34555533
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.9e-17 Score=185.76 Aligned_cols=203 Identities=16% Similarity=0.200 Sum_probs=129.5
Q ss_pred HhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHH-HHhhcCCCCeEEEEcCCCHhhHHHHhccc----C
Q 003029 587 LRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPL-NALCHDPKTTIVVLSGSDRNVLDKNFQEY----N 661 (856)
Q Consensus 587 ~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L-~~L~~d~g~~V~I~SGR~~~~l~~~~~~l----~ 661 (856)
..+.+-+|++|+||||++..+ ...+++....+| +++.+ +|+.++++|||+...+.++.+.+ +
T Consensus 5 ~~~~~~lI~sDLDGTLL~~~~------------~~~~s~~~~~~l~~~~~~-~gi~fv~aTGR~~~~~~~l~~~~~l~~p 71 (413)
T PLN02382 5 SGSPRLMIVSDLDHTMVDHHD------------PENLSLLRFNALWEAEYR-HDSLLVFSTGRSPTLYKELRKEKPLLTP 71 (413)
T ss_pred cCCCCEEEEEcCCCcCcCCCC------------ccchhHHHHHHHHHHhhc-CCeeEEEEcCCCHHHHHHHHHhCCCCCC
Confidence 345678999999999997631 235665566666 87775 79999999999988887776665 3
Q ss_pred ceEEeeCceEEEecC-----CeeeecccccCChHHHH-HHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHH
Q 003029 662 LWLAAENGMFLRCTT-----GKWMTTMPEHLNMEWVD-SLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQAR 735 (856)
Q Consensus 662 lgliaenG~~i~~~~-----~~w~~~~~~~~~~~w~~-~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~ 735 (856)
..+|+.||+.|...+ ..|...+ +..|.. .+.+.+..|.........+.+-..+.+.+... + .....+
T Consensus 72 ~~~I~~nGt~I~~~~~~~~d~~w~~~l----~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~--~-~~~~~~ 144 (413)
T PLN02382 72 DITIMSVGTEIAYGESMVPDHGWVEYL----NKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKK--K-AQEVIK 144 (413)
T ss_pred CEEEEcCCcEEEeCCCCccChhHHHHH----hccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechH--H-hHHHHH
Confidence 458888999997522 1233222 223332 12222322211111122233333444443321 1 111123
Q ss_pred HHHHHHhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHh---CcCCcCCCCcceEEEEecCCccccccccccc
Q 003029 736 DMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEI---VHSKKMKTAIDYVLCIGHFLGKNCNLPLQFL 811 (856)
Q Consensus 736 el~~~L~~~~~~~~~v~v-~~g~~~vEV~p~gvnKG~av~~ll~~l---~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~ 811 (856)
++.+.+ .. ....+.+ .+++.++||.|+++|||.|+++|++++ | ++++.+++||| +.||++| |+.+
T Consensus 145 ~l~~~~-~~--~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~g------i~~~~~iafGD-s~NDleM-l~~a 213 (413)
T PLN02382 145 ELSERL-EK--RGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEG------KAPVNTLVCGD-SGNDAEL-FSVP 213 (413)
T ss_pred HHHHHH-Hh--cCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcC------CChhcEEEEeC-CHHHHHH-HhcC
Confidence 333333 21 1224454 457789999999999999999999999 6 67899999999 9999999 8875
Q ss_pred ccCc-ceEEeCCC
Q 003029 812 MQTI-STVRLDSS 823 (856)
Q Consensus 812 ~~~~-~~v~V~~~ 823 (856)
+ .+|.|+|.
T Consensus 214 ---g~~gvam~NA 223 (413)
T PLN02382 214 ---DVYGVMVSNA 223 (413)
T ss_pred ---CCCEEEEcCC
Confidence 4 57888775
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.73 E-value=9e-16 Score=175.73 Aligned_cols=299 Identities=22% Similarity=0.219 Sum_probs=203.3
Q ss_pred CCCEEEEeCccchhHHHHHHhc---CCCCeEEEEEecC-----CC-chhhhhcCccc-------------HHHHHHhhcC
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEY---NSDMKVGWFLHTP-----FP-SSEIHRTLPSR-------------SDLLRAVLAA 288 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~---~~~~~i~~flH~P-----fP-~~e~fr~lp~~-------------~~il~~ll~a 288 (856)
.+|||++||||+-++|.++++. ...++.+|++|.- |+ .......||.. .-+-.++..|
T Consensus 130 ~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~a 209 (487)
T COG0297 130 LPDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYA 209 (487)
T ss_pred CCCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheec
Confidence 5799999999999999999997 7789999999963 33 11222344421 2233457788
Q ss_pred CEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcC-------Cch----HHHHHHHH
Q 003029 289 DLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI-------NPV----QVHIKELQ 357 (856)
Q Consensus 289 DlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~-------~~~----~~~~~~lr 357 (856)
|.|..-++.|++.... ...|. .-...+++ +.-++.-|=||||.+...+.... .++ .+....|.
T Consensus 210 d~vttVSptYa~Ei~t---~~~g~-gl~g~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~ 283 (487)
T COG0297 210 DAVTTVSPTYAGEIYT---PEYGE-GLEGLLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQ 283 (487)
T ss_pred cEEEEECHHHHHhhcc---ccccc-cchhhhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHH
Confidence 8888888888775441 11110 00011122 22467777889987766553211 001 11223355
Q ss_pred HHhc-----CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcc
Q 003029 358 ETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR 432 (856)
Q Consensus 358 ~~~~-----~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~ 432 (856)
++++ +.+++..|+||...||++.+++|+..+++.. + .|+++|.+. ..+++.+..++.++..+
T Consensus 284 ~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~----~~vilG~gd-------~~le~~~~~la~~~~~~ 350 (487)
T COG0297 284 ERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--W----QLVLLGTGD-------PELEEALRALASRHPGR 350 (487)
T ss_pred HHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--c----eEEEEecCc-------HHHHHHHHHHHHhcCce
Confidence 5552 5689999999999999999999999999876 3 477777531 25677888888876653
Q ss_pred cCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc-c--------
Q 003029 433 FGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-G-------- 503 (856)
Q Consensus 433 ~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l-g-------- 503 (856)
+ .+.-..+..-...+|..||++++||..|++||+-++||.-+ .++|+++.+|.++.+ .
T Consensus 351 ~---------~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryG----tvpIv~~tGGLadTV~~~~~~~~~~ 417 (487)
T COG0297 351 V---------LVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYG----TLPIVRETGGLADTVVDRNEWLIQG 417 (487)
T ss_pred E---------EEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcC----CcceEcccCCccceecCccchhccC
Confidence 2 12334466777889999999999999999999999999994 799999999999987 2
Q ss_pred -CCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHh
Q 003029 504 -AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV--TTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 504 -~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v--~~~~~~~W~~~fl~~l~~~ 562 (856)
.+|+++.|.|+++++.+|.+|+........ .++...... ..++|+.=+.++++-.+..
T Consensus 418 ~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~-~w~~~~~~~m~~d~sw~~sa~~y~~lY~~~ 478 (487)
T COG0297 418 VGTGFLFLQTNPDHLANALRRALVLYRAPPL-LWRKVQPNAMGADFSWDLSAKEYVELYKPL 478 (487)
T ss_pred ceeEEEEecCCHHHHHHHHHHHHHHhhCCHH-HHHHHHHhhcccccCchhHHHHHHHHHHHH
Confidence 358999999999999999999975432111 022222222 3455555566665555544
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.6e-15 Score=174.29 Aligned_cols=285 Identities=15% Similarity=0.132 Sum_probs=176.9
Q ss_pred HHHHHhcCCCCEEEEeCccchhHHHHHHh-cCCCCeEEEEEecCCC-chhhhhcCcccHHHHHHhh-cCCEEEEeCHHHH
Q 003029 223 DVVNKHYKDGDVVWCHDYHLMFLPKCLKE-YNSDMKVGWFLHTPFP-SSEIHRTLPSRSDLLRAVL-AADLVGFHTYDYA 299 (856)
Q Consensus 223 ~~i~~~~~~~DvIwvHDyhl~llp~~lr~-~~~~~~i~~flH~PfP-~~e~fr~lp~~~~il~~ll-~aDlIgf~t~~~~ 299 (856)
.++++..+| |+|++|.+.++ |.++.. +..++++.+..|.-.. +...++.+ ..+.+.++ .+|.|..++....
T Consensus 117 ~~~l~~~~P-d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~~~~ 190 (425)
T PRK05749 117 RRFLRFWRP-KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSEEDA 190 (425)
T ss_pred HHHHHhhCC-CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCHHHH
Confidence 344555565 89998877765 444432 2335677665554222 22222211 22333333 5799999998877
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh-cCCceEEEeecccccCCh
Q 003029 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGI 378 (856)
Q Consensus 300 ~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~V~Rld~~KGi 378 (856)
+.+.. +|.. .. +.++|++ +.+.+... ........+++.+ +++++++++++. .|+.
T Consensus 191 ~~l~~-----~g~~-----------~~-i~vi~n~-~~d~~~~~----~~~~~~~~~r~~~~~~~~vil~~~~~--~~~~ 246 (425)
T PRK05749 191 ERFLA-----LGAK-----------NE-VTVTGNL-KFDIEVPP----ELAARAATLRRQLAPNRPVWIAASTH--EGEE 246 (425)
T ss_pred HHHHH-----cCCC-----------CC-cEecccc-cccCCCCh----hhHHHHHHHHHHhcCCCcEEEEeCCC--chHH
Confidence 77653 2321 22 5566763 33322211 1112234566666 678899999875 6889
Q ss_pred HHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHH-HHHHHHHHHHHHHhhcc---cCC--C--CcccEEEeCCCCCH
Q 003029 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEY-QRLTSQVHEIVGRINGR---FGT--L--TAVPIHHLDRSLDF 450 (856)
Q Consensus 379 ~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~-~~l~~~l~~lv~~IN~~---~g~--~--~~~pV~~~~g~v~~ 450 (856)
..+|+||.++.+++|+++ |+++| ++++. .+++ +++.+.+-. |.. . .-..|. +.+ +.
T Consensus 247 ~~ll~A~~~l~~~~~~~~----liivG-----~g~~r~~~l~----~~~~~~gl~~~~~~~~~~~~~~~~v~-l~~--~~ 310 (425)
T PRK05749 247 ELVLDAHRALLKQFPNLL----LILVP-----RHPERFKEVE----ELLKKAGLSYVRRSQGEPPSADTDVL-LGD--TM 310 (425)
T ss_pred HHHHHHHHHHHHhCCCcE----EEEcC-----CChhhHHHHH----HHHHhCCCcEEEccCCCCCCCCCcEE-EEe--cH
Confidence 999999999988888754 77664 34443 3344 444332221 100 0 000122 222 35
Q ss_pred HHHHHHHHHccEEEE-CCCCcCCChhHHHHHhhcCCCCceEEEeCCCC-chh---hccCCeEEECCCCHHHHHHHHHHHH
Q 003029 451 PALCALYAVTDVALV-TSLRDGMNLVSYEFVACQDLKKGVLILSEFAG-AAQ---SLGAGAILVNPWNITEVANAIARAL 525 (856)
Q Consensus 451 ~el~aly~~ADv~v~-~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG-~~~---~lg~~g~lVnP~d~~~lA~ai~~aL 525 (856)
.++..+|+.||++++ +|+.||+|++++|||||+ .|+|++...| ..+ .+..+|.++.|.|++++|++|.+++
T Consensus 311 ~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G----~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll 386 (425)
T PRK05749 311 GELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFG----VPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLL 386 (425)
T ss_pred HHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhC----CCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHh
Confidence 799999999999665 688899999999999994 8888876543 222 2235688888999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 003029 526 NMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560 (856)
Q Consensus 526 ~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 560 (856)
++ ++.+.++++++++++.++. .-.+..++.+.
T Consensus 387 ~~-~~~~~~m~~~a~~~~~~~~--~~~~~~~~~l~ 418 (425)
T PRK05749 387 TD-PDARQAYGEAGVAFLKQNQ--GALQRTLQLLE 418 (425)
T ss_pred cC-HHHHHHHHHHHHHHHHhCc--cHHHHHHHHHH
Confidence 85 4578888888899987762 33444544444
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.2e-17 Score=171.29 Aligned_cols=192 Identities=15% Similarity=0.145 Sum_probs=119.5
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc--eEEeeCce
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAENGM 670 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--gliaenG~ 670 (856)
+|++|+||||++.. .++++++++|++|.+ .|+.|+++|||+...+..++..+++ ++|++||+
T Consensus 1 li~~DlDGTLl~~~---------------~~~~~~~~ai~~l~~-~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa 64 (225)
T TIGR02461 1 VIFTDLDGTLLPPG---------------YEPGPAREALEELKD-LGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGG 64 (225)
T ss_pred CEEEeCCCCCcCCC---------------CCchHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCc
Confidence 58999999999852 245679999999996 6999999999999999999988864 79999999
Q ss_pred EEEecCC-------------eeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecce-EEEEeecCChhhh------
Q 003029 671 FLRCTTG-------------KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS-LVWNYKYADVEFG------ 730 (856)
Q Consensus 671 ~i~~~~~-------------~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~s-i~~~y~~~d~e~~------ 730 (856)
+|..... .. .++...++ .+.++++++...+..+-.++..-... +. .+....++..
T Consensus 65 ~I~~~~~~~~~~~~~~~~~~~~-~i~~~~l~---~~~~~~il~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 139 (225)
T TIGR02461 65 AIFIPRGYFPFPVGAGREVGNY-EVIELGKP---VAKIRAALKEAENEYGLKYYGNSTAEEVE-KLTGLPRELAPLAKRR 139 (225)
T ss_pred EEEecCccccccccccccCCCe-EEEEcCCC---HHHHHHHHHHHHHhcCccchhcCCHHHHH-HHHCcCHHHHHHHHhh
Confidence 9986321 11 11111233 33445555433321111110000000 00 0000000000
Q ss_pred ----------HHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCC
Q 003029 731 ----------RIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL 800 (856)
Q Consensus 731 ----------~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~ 800 (856)
..+..++.+.+ . ...+.++++..++++. .++|||.|++.+++.++.. .+.+.++|||| +
T Consensus 140 ~~~ki~~~~~~e~~~~~~~~~-~----~~~~~~~~s~~~~~i~-~~~sK~~al~~l~~~~~~~----~~~~~~i~~GD-~ 208 (225)
T TIGR02461 140 EYSETIFLWSREGWEAILVTA-R----ARGLKYTHGGRFYTVH-GGSDKGKAIKRLLDLYKLR----PGAIESVGLGD-S 208 (225)
T ss_pred hcCCcccCCCHHHHHHHHHHH-H----HcCCcEEECCEEEEEC-CCCCHHHHHHHHHHHhccc----cCcccEEEEcC-C
Confidence 01112233333 1 2356777777778875 4999999999999998731 24568999999 9
Q ss_pred cccccccccccccCcceEEe
Q 003029 801 GKNCNLPLQFLMQTISTVRL 820 (856)
Q Consensus 801 ~nDe~M~f~~~~~~~~~v~V 820 (856)
.||++| |+++ +.+|.|
T Consensus 209 ~nD~~m-l~~a---g~~v~v 224 (225)
T TIGR02461 209 ENDFPM-FEVV---DLAFLV 224 (225)
T ss_pred HHHHHH-HHhC---CCcEec
Confidence 999999 9877 445544
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.9e-16 Score=158.22 Aligned_cols=156 Identities=27% Similarity=0.356 Sum_probs=120.6
Q ss_pred cCCceEEEeecccccCChHHHHHHHHHHHHh-CcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcc
Q 003029 361 AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEE-NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (856)
Q Consensus 361 ~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~-~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~ 439 (856)
.++++|+++||+++.||+..+++|+..+.++ .|+ +.|+++|. ++.. ..+..++...+.. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G~-----~~~~----~~~~~~~~~~~~~------~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPN----YKLVIVGD-----GEYK----KELKNLIEKLNLK------E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTT----EEEEEESH-----CCHH----HHHHHHHHHTTCG------T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCC----eEEEEEcc-----cccc----ccccccccccccc------c
Confidence 4789999999999999999999999999875 555 45777751 2222 2333333333221 1
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHH
Q 003029 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEV 517 (856)
Q Consensus 440 pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~l 517 (856)
.+.+ .+.++.+++.++|+.||++|.||..||||++++|||+| +.|+|+|..+|..+.+ +.+|+++++.|++++
T Consensus 74 ~i~~-~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~----g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l 148 (172)
T PF00534_consen 74 NIIF-LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMAC----GCPVIASDIGGNNEIINDGVNGFLFDPNDIEEL 148 (172)
T ss_dssp TEEE-EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHT----T-EEEEESSTHHHHHSGTTTSEEEESTTSHHHH
T ss_pred cccc-cccccccccccccccceecccccccccccccccccccc----ccceeeccccCCceeeccccceEEeCCCCHHHH
Confidence 3665 67778999999999999999999999999999999999 4899999988888877 457899999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHH
Q 003029 518 ANAIARALNMSPEEREKRHWHNFT 541 (856)
Q Consensus 518 A~ai~~aL~~~~~er~~r~~~~~~ 541 (856)
+++|.+++.++ +.+..+.++.++
T Consensus 149 ~~~i~~~l~~~-~~~~~l~~~~~~ 171 (172)
T PF00534_consen 149 ADAIEKLLNDP-ELRQKLGKNARE 171 (172)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHCCH-HHHHHHHHHhcC
Confidence 99999999976 466666665554
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.6e-16 Score=165.08 Aligned_cols=196 Identities=17% Similarity=0.288 Sum_probs=124.3
Q ss_pred CeEEEEecCCccC-CCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc----CceEE
Q 003029 591 NRLLILGFNATLT-EPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY----NLWLA 665 (856)
Q Consensus 591 ~rLI~lD~DGTL~-~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l----~lgli 665 (856)
++||++|+||||+ .+ ..-..++.+.++ ....+++.++++|||+.+.+.+.+... +.++|
T Consensus 2 ~~ll~sDlD~Tl~~~~---------------~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I 65 (247)
T PF05116_consen 2 PRLLASDLDGTLIDGD---------------DEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQPDYII 65 (247)
T ss_dssp SEEEEEETBTTTBHCH---------------HHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEE
T ss_pred CEEEEEECCCCCcCCC---------------HHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEE
Confidence 5899999999999 32 122356666666 333579999999999999999888875 45899
Q ss_pred eeCceEEEecC-----CeeeecccccCChHHH-HHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHH
Q 003029 666 AENGMFLRCTT-----GKWMTTMPEHLNMEWV-DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQ 739 (856)
Q Consensus 666 aenG~~i~~~~-----~~w~~~~~~~~~~~w~-~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~ 739 (856)
+.+|+.|.... ..|...+ +..|. +.+.+++..+..-.+..-.+.....+.+.+...+.. ....++.+
T Consensus 66 ~svGt~I~~~~~~~~d~~w~~~i----~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~~~---~~~~~i~~ 138 (247)
T PF05116_consen 66 TSVGTEIYYGENWQPDEEWQAHI----DERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDDSA---DILEEIRA 138 (247)
T ss_dssp ETTTTEEEESSTTEE-HHHHHHH----HTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTSHC---HHHHHHHH
T ss_pred ecCCeEEEEcCCCcChHHHHHHH----HhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEecccch---hHHHHHHH
Confidence 99999998621 1243322 22343 345555554432111111122233445555443322 12344555
Q ss_pred HHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceE
Q 003029 740 HLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTV 818 (856)
Q Consensus 740 ~L~~~~~~~~~v~v~~-g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v 818 (856)
.+ .. ....+.++. +...++|.|+++|||.|+++|+++++ ++.+.|+++|| +.||.+| |. ....+|
T Consensus 139 ~l-~~--~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~------~~~~~vl~aGD-SgND~~m-L~---~~~~~v 204 (247)
T PF05116_consen 139 RL-RQ--RGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWG------IPPEQVLVAGD-SGNDLEM-LE---GGDHGV 204 (247)
T ss_dssp HH-HC--CTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--------GGGEEEEES-SGGGHHH-HC---CSSEEE
T ss_pred HH-HH--cCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhC------CCHHHEEEEeC-CCCcHHH-Hc---CcCCEE
Confidence 55 22 233455554 56789999999999999999999998 67899999999 9999999 74 446788
Q ss_pred EeCCC
Q 003029 819 RLDSS 823 (856)
Q Consensus 819 ~V~~~ 823 (856)
.|+|.
T Consensus 205 vV~Na 209 (247)
T PF05116_consen 205 VVGNA 209 (247)
T ss_dssp E-TTS
T ss_pred EEcCC
Confidence 99884
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.8e-14 Score=153.52 Aligned_cols=168 Identities=17% Similarity=0.198 Sum_probs=135.2
Q ss_pred eeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh-cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEE
Q 003029 324 RLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLL 402 (856)
Q Consensus 324 ~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv 402 (856)
...+|.++||-|+++.|.|...+ +. .+...|+.++||.|.||++.++..+.++.+++|+.+ ++
T Consensus 167 ~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vr----fi 230 (426)
T KOG1111|consen 167 APAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVR----FI 230 (426)
T ss_pred CHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCCee----EE
Confidence 45689999999999999874321 12 345789999999999999999999999999999865 77
Q ss_pred EEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhh
Q 003029 403 QIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (856)
Q Consensus 403 ~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~ 482 (856)
++| |||....+++.+++. +- ..+|. +.|.++++++...|..-|||+.||+.|.|+++++||+.|
T Consensus 231 i~G-----DGPk~i~lee~lEk~----~l------~~rV~-~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaSc 294 (426)
T KOG1111|consen 231 IIG-----DGPKRIDLEEMLEKL----FL------QDRVV-MLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASC 294 (426)
T ss_pred Eec-----CCcccchHHHHHHHh----hc------cCceE-EecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhC
Confidence 664 666555555555544 11 13566 489999999999999999999999999999999999999
Q ss_pred cCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcC
Q 003029 483 QDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNM 527 (856)
Q Consensus 483 ~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~ 527 (856)
|.++|.+..+|..+.|..+-+...+-.++++++++.++++.
T Consensus 295 ----GL~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~~ 335 (426)
T KOG1111|consen 295 ----GLPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAITK 335 (426)
T ss_pred ----CCEEEEeecCCccccCCccceeccCCChHHHHHHHHHHHHH
Confidence 48899999999999994343445566788999999888863
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.3e-13 Score=153.97 Aligned_cols=264 Identities=17% Similarity=0.135 Sum_probs=164.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCccc-HHHHHHhhcCCEEEEeCHHHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-SDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~-~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (856)
+..++|.+..-...+... .+..++++-+|-.|+..... -+.. ...-..+..||+|...+....+.+..
T Consensus 102 ~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~--~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~----- 170 (373)
T cd04950 102 GRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGG--PPELLEAERRLLKRADLVFTTSPSLYEAKRR----- 170 (373)
T ss_pred CCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCC--CHHHHHHHHHHHHhCCEEEECCHHHHHHHhh-----
Confidence 456778875544444333 45667777666544422110 0111 11122345789988777755443211
Q ss_pred hCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHH
Q 003029 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (856)
Q Consensus 310 lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l 389 (856)
+ + .++.++|+|+|.+.|.+....+.. .+.+. ..++++|+|+|++.+.+++. +|.++ .
T Consensus 171 -----------~-~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~~--~~~~~~i~y~G~l~~~~d~~-ll~~l---a 227 (373)
T cd04950 171 -----------L-N--PNVVLVPNGVDYEHFAAARDPPPP---PADLA--ALPRPVIGYYGAIAEWLDLE-LLEAL---A 227 (373)
T ss_pred -----------C-C--CCEEEcccccCHHHhhcccccCCC---hhHHh--cCCCCEEEEEeccccccCHH-HHHHH---H
Confidence 1 1 467889999999999764321110 01111 24678999999999966664 44443 3
Q ss_pred HhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-
Q 003029 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL- 468 (856)
Q Consensus 390 ~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~- 468 (856)
+.+|++. |++||... ...+ ...+ .. ...|++ .|.++.+++.++|+.||++++|+.
T Consensus 228 ~~~p~~~----~vliG~~~--~~~~-------~~~~----~~------~~nV~~-~G~~~~~~l~~~l~~~Dv~l~P~~~ 283 (373)
T cd04950 228 KARPDWS----FVLIGPVD--VSID-------PSAL----LR------LPNVHY-LGPKPYKELPAYLAGFDVAILPFRL 283 (373)
T ss_pred HHCCCCE----EEEECCCc--CccC-------hhHh----cc------CCCEEE-eCCCCHHHHHHHHHhCCEEecCCcc
Confidence 4577764 77777431 0000 0111 00 123664 799999999999999999999986
Q ss_pred ----CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 003029 469 ----RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (856)
Q Consensus 469 ----~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~ 544 (856)
.+++++.++|||||| .|+|+|....+.+.. . +..+.+.|+++++++|.++|..+..++..+. ...++
T Consensus 284 ~~~~~~~~P~Kl~EylA~G----~PVVat~~~~~~~~~-~-~~~~~~~d~~~~~~ai~~~l~~~~~~~~~~~---~~~~~ 354 (373)
T cd04950 284 NELTRATSPLKLFEYLAAG----KPVVATPLPEVRRYE-D-EVVLIADDPEEFVAAIEKALLEDGPARERRR---LRLAA 354 (373)
T ss_pred chhhhcCCcchHHHHhccC----CCEEecCcHHHHhhc-C-cEEEeCCCHHHHHHHHHHHHhcCCchHHHHH---HHHHH
Confidence 357899999999994 888888765544332 3 3444467999999999998765543433322 23688
Q ss_pred hcCHHHHHHHHHHHHHH
Q 003029 545 THTAQEWAETFVSELND 561 (856)
Q Consensus 545 ~~~~~~W~~~fl~~l~~ 561 (856)
+|||+.=++.+++.|.+
T Consensus 355 ~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 355 QNSWDARAAEMLEALQE 371 (373)
T ss_pred HCCHHHHHHHHHHHHHh
Confidence 99999888888866653
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.54 E-value=2e-12 Score=146.77 Aligned_cols=217 Identities=10% Similarity=0.051 Sum_probs=139.9
Q ss_pred cCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCC
Q 003029 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGR 363 (856)
Q Consensus 287 ~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~ 363 (856)
.+|.+...+....+.+.. .|. ...++.+++++||++.+.+. + ....+|+++ +++
T Consensus 150 ~~d~~~~~s~~~~~~l~~-----~g~-----------~~~ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~ 206 (382)
T PLN02605 150 GVTRCFCPSEEVAKRALK-----RGL-----------EPSQIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDL 206 (382)
T ss_pred CCCEEEECCHHHHHHHHH-----cCC-----------CHHHEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCC
Confidence 578887766544333321 122 23467788999987543321 1 122355665 367
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHh----CcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcc
Q 003029 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEE----NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (856)
Q Consensus 364 ~iIl~V~Rld~~KGi~~~L~Af~~~l~~----~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~ 439 (856)
++|+++||....||+..+++++..++.. .|+ +.++++++. ++ .+++++++... + .
T Consensus 207 ~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~----~~~~vi~G~----~~---~~~~~L~~~~~--~--------~ 265 (382)
T PLN02605 207 PAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPI----GQVVVICGR----NK---KLQSKLESRDW--K--------I 265 (382)
T ss_pred cEEEEECCCcccccHHHHHHHHHHhhccccccCCC----ceEEEEECC----CH---HHHHHHHhhcc--c--------C
Confidence 8999999999999999999999876521 233 333334421 22 22333333210 1 1
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCC-----CCchhhccCCeEEECCCCH
Q 003029 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-----AGAAQSLGAGAILVNPWNI 514 (856)
Q Consensus 440 pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~-----aG~~~~lg~~g~lVnP~d~ 514 (856)
.|+ +.|+++ ++..+|++||++|.+| .|++++|||||+ .|+|++.. .|.++.+-.+|.-+.+.|+
T Consensus 266 ~v~-~~G~~~--~~~~l~~aaDv~V~~~----g~~ti~EAma~g----~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~ 334 (382)
T PLN02605 266 PVK-VRGFVT--NMEEWMGACDCIITKA----GPGTIAEALIRG----LPIILNGYIPGQEEGNVPYVVDNGFGAFSESP 334 (382)
T ss_pred CeE-EEeccc--cHHHHHHhCCEEEECC----CcchHHHHHHcC----CCEEEecCCCccchhhHHHHHhCCceeecCCH
Confidence 355 467774 7999999999999866 378999999994 89999985 2333444123333345899
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 003029 515 TEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSE 558 (856)
Q Consensus 515 ~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~ 558 (856)
++++++|.++|.++++.+.++.++++++...+.+..-++..++.
T Consensus 335 ~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 335 KEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLHEL 378 (382)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 99999999999975557777777778877766665555544433
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.44 E-value=7.3e-12 Score=141.86 Aligned_cols=249 Identities=14% Similarity=0.116 Sum_probs=168.7
Q ss_pred HHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh--
Q 003029 283 RAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-- 360 (856)
Q Consensus 283 ~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-- 360 (856)
+....+|.+.-.++-..+.|.. .+..++. ..+.+...+||.+.+.+...... .+.....|...
T Consensus 205 e~~~~~~~~~~ns~~~~~~f~~---~~~~L~~-----------~d~~~~y~ei~~s~~~~~~~~~~-~~~~~~~r~~~~v 269 (495)
T KOG0853|consen 205 ETTGLAWKILVNSYFTKRQFKA---TFVSLSN-----------SDITSTYPEIDGSWFTYGQYESH-LELRLPVRLYRGV 269 (495)
T ss_pred hhhhccceEecchhhhhhhhhh---hhhhcCC-----------CCcceeeccccchhccccccccc-hhcccccceeeee
Confidence 4456678775555433344332 2222221 12556667788776653111000 00011111111
Q ss_pred -cCCceEEEeecccccCChHHHHHHHHHHHHhCcCcc-CceEEEEEEcC-CCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003029 361 -AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWR-GKVVLLQIAVP-TRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (856)
Q Consensus 361 -~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~-~~v~Lv~v~~p-~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (856)
..+.++..+-|+.|.||+...|.||..+...-|+.. ....++..+.+ +.+...+...+.+++.+++++.+- +|
T Consensus 270 ~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l-~g--- 345 (495)
T KOG0853|consen 270 SGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL-LG--- 345 (495)
T ss_pred cccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc-cC---
Confidence 237889999999999999999999999988775411 13455545532 223334445556677777766432 12
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHH
Q 003029 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNIT 515 (856)
Q Consensus 438 ~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~ 515 (856)
.+++|..+.++.+...++..+.+.+.++..|.||+|++|||||+ .|+|++..+|-++.+ |.+|++++| +.+
T Consensus 346 --~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~g----lPvvAt~~GGP~EiV~~~~tG~l~dp-~~e 418 (495)
T KOG0853|consen 346 --QFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACG----LPVVATNNGGPAEIVVHGVTGLLIDP-GQE 418 (495)
T ss_pred --ceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcC----CCEEEecCCCceEEEEcCCcceeeCC-chH
Confidence 35556778888888888889999999998999999999999994 999999999999988 789999999 666
Q ss_pred ---HHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHh
Q 003029 516 ---EVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVSELNDT 562 (856)
Q Consensus 516 ---~lA~ai~~aL~~~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~~l~~~ 562 (856)
.+|++|.++.+++. .+.+++++++++|.+ +++ ..|.+.+...
T Consensus 419 ~~~~~a~~~~kl~~~p~-l~~~~~~~G~~rV~e~fs~----~~~~~ri~~~ 464 (495)
T KOG0853|consen 419 AVAELADALLKLRRDPE-LWARMGKNGLKRVKEMFSW----QHYSERIASV 464 (495)
T ss_pred HHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHhH----HHHHHHHHHH
Confidence 59999999999765 688899999999977 666 4455554444
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.6e-11 Score=130.55 Aligned_cols=198 Identities=25% Similarity=0.340 Sum_probs=143.7
Q ss_pred EEEEeecccChhhhhhh-hcCCchHHHHHHHHHHhcC--CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEE
Q 003029 327 RVAAFPIGIDSERFIRA-LEINPVQVHIKELQETFAG--RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (856)
Q Consensus 327 ~v~viP~GID~~~f~~~-~~~~~~~~~~~~lr~~~~~--~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~ 403 (856)
++.++|+|++++.+... ... ..+ ..+++++||+.+.||+...++|+..+....++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPARIGL-------------LPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCccccCC-------------CcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 67789999999987642 100 112 36999999999999999999999999887665 44666
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhc
Q 003029 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (856)
Q Consensus 404 v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~ 483 (856)
+|..... ...+.. ++...+.. ..|.+ .|.++.+++..+|+.||++++||..||||++++|||+|+
T Consensus 236 ~g~~~~~----~~~~~~----~~~~~~~~------~~v~~-~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g 300 (381)
T COG0438 236 VGDGPER----REELEK----LAKKLGLE------DNVKF-LGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAG 300 (381)
T ss_pred EcCCCcc----HHHHHH----HHHHhCCC------CcEEE-ecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcC
Confidence 6543211 122222 33332221 13554 888898899999999999999999999999999999994
Q ss_pred CCCCceEEEeCCCCchhhccCC--eEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Q 003029 484 DLKKGVLILSEFAGAAQSLGAG--AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELN 560 (856)
Q Consensus 484 ~~~~g~lVlSe~aG~~~~lg~~--g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~ 560 (856)
.|+|+|...|..+.+..+ |+++++.|.+++++++..++++. +.+.......++.+ ..+++..=+..++..+.
T Consensus 301 ----~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (381)
T COG0438 301 ----TPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEFSWERIAEQLLELYE 375 (381)
T ss_pred ----CcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 899999999888888443 78888888999999999999887 34444444344444 57776666655555444
Q ss_pred H
Q 003029 561 D 561 (856)
Q Consensus 561 ~ 561 (856)
.
T Consensus 376 ~ 376 (381)
T COG0438 376 E 376 (381)
T ss_pred H
Confidence 3
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.2e-10 Score=131.89 Aligned_cols=269 Identities=13% Similarity=0.083 Sum_probs=161.8
Q ss_pred HHHHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHH
Q 003029 223 DVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHF 302 (856)
Q Consensus 223 ~~i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~F 302 (856)
.++++..+| |+|++| +....++.+.+....++|+...+ +-|-. + ...+ .-.+|.+...+....+.+
T Consensus 97 ~~~l~~~~p-D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~-td~~~-------~-~~~~---~~~ad~i~~~s~~~~~~l 162 (380)
T PRK13609 97 KLLLQAEKP-DIVINT-FPIIAVPELKKQTGISIPTYNVL-TDFCL-------H-KIWV---HREVDRYFVATDHVKKVL 162 (380)
T ss_pred HHHHHHhCc-CEEEEc-ChHHHHHHHHHhcCCCCCeEEEe-CCCCC-------C-cccc---cCCCCEEEECCHHHHHHH
Confidence 444444554 899985 55556776666555567765332 22211 0 0111 125788887776544443
Q ss_pred HHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhc---CCc-eEEEeecccccCCh
Q 003029 303 VSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRK-VMLGVDRLDMIKGI 378 (856)
Q Consensus 303 l~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~-iIl~V~Rld~~KGi 378 (856)
.+ .|. ...++.++++.++. .|.... + ...++++++ +++ ++++.|++...||+
T Consensus 163 ~~-----~gi-----------~~~ki~v~G~p~~~-~f~~~~---~----~~~~~~~~~l~~~~~~il~~~G~~~~~k~~ 218 (380)
T PRK13609 163 VD-----IGV-----------PPEQVVETGIPIRS-SFELKI---N----PDIIYNKYQLCPNKKILLIMAGAHGVLGNV 218 (380)
T ss_pred HH-----cCC-----------ChhHEEEECcccCh-HHcCcC---C----HHHHHHHcCCCCCCcEEEEEcCCCCCCcCH
Confidence 32 122 12345554444432 243211 1 112455552 444 55567899999999
Q ss_pred HHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 003029 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (856)
Q Consensus 379 ~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~ 458 (856)
..+++++.. .|+ +.++++++. +.+ +++++++++...+ ..|++ .|+++ ++..+|+
T Consensus 219 ~~li~~l~~----~~~----~~~viv~G~---~~~----~~~~l~~~~~~~~--------~~v~~-~g~~~--~~~~l~~ 272 (380)
T PRK13609 219 KELCQSLMS----VPD----LQVVVVCGK---NEA----LKQSLEDLQETNP--------DALKV-FGYVE--NIDELFR 272 (380)
T ss_pred HHHHHHHhh----CCC----cEEEEEeCC---CHH----HHHHHHHHHhcCC--------CcEEE-Eechh--hHHHHHH
Confidence 999888742 354 446666532 122 3344555443322 13665 57764 6889999
Q ss_pred HccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeC-CCCc----hhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHH
Q 003029 459 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGA----AQSLGAGAILVNPWNITEVANAIARALNMSPEERE 533 (856)
Q Consensus 459 ~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe-~aG~----~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~ 533 (856)
+||+++. ++.|++++|||||+ .|+|++. ..|. +..+...|..+.+.|+++++++|.++++++ +.+.
T Consensus 273 ~aD~~v~----~~gg~t~~EA~a~g----~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~~~~~l~~~i~~ll~~~-~~~~ 343 (380)
T PRK13609 273 VTSCMIT----KPGGITLSEAAALG----VPVILYKPVPGQEKENAMYFERKGAAVVIRDDEEVFAKTEALLQDD-MKLL 343 (380)
T ss_pred hccEEEe----CCCchHHHHHHHhC----CCEEECCCCCCcchHHHHHHHhCCcEEEECCHHHHHHHHHHHHCCH-HHHH
Confidence 9999874 45589999999994 8888876 4442 122323455556789999999999999864 4666
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHhHH
Q 003029 534 KRHWHNFTHVTTHTAQEWAETFVSELNDTVV 564 (856)
Q Consensus 534 ~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~ 564 (856)
++.++.++....+++...++.+++.+...+.
T Consensus 344 ~m~~~~~~~~~~~s~~~i~~~i~~~~~~~~~ 374 (380)
T PRK13609 344 QMKEAMKSLYLPEPADHIVDDILAENHVEPN 374 (380)
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHhhhhhhh
Confidence 6667777777778888888888877765543
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.2e-10 Score=129.87 Aligned_cols=245 Identities=17% Similarity=0.145 Sum_probs=150.1
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHH
Q 003029 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVS 304 (856)
Q Consensus 225 i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~ 304 (856)
+++..+ .|+|+.|.....+ +..+..+..+.|+.++.|..+|. .. +.++ ...+|.|...++...+.
T Consensus 84 ~i~~~~-pDvI~~~~~~~~~-~~~~~a~~~~~p~v~~~~~~~~~--~~------~~~~--~~~~~~vi~~s~~~~~~--- 148 (350)
T cd03785 84 ILKKFK-PDVVVGFGGYVSG-PVGLAAKLLGIPLVIHEQNAVPG--LA------NRLL--ARFADRVALSFPETAKY--- 148 (350)
T ss_pred HHHhcC-CCEEEECCCCcch-HHHHHHHHhCCCEEEEcCCCCcc--HH------HHHH--HHhhCEEEEcchhhhhc---
Confidence 334344 5999998755433 33333344467776655554542 10 1111 12367777665533221
Q ss_pred HHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHHH
Q 003029 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 381 (856)
Q Consensus 305 ~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~~ 381 (856)
-...++.++|+|+|.+.+.+.. . ++++ .++++|+.+++....|+...+
T Consensus 149 ------------------~~~~~~~~i~n~v~~~~~~~~~-------~----~~~~~~~~~~~~i~~~~g~~~~~~~~~~ 199 (350)
T cd03785 149 ------------------FPKDKAVVTGNPVREEILALDR-------E----RARLGLRPGKPTLLVFGGSQGARAINEA 199 (350)
T ss_pred ------------------CCCCcEEEECCCCchHHhhhhh-------h----HHhcCCCCCCeEEEEECCcHhHHHHHHH
Confidence 0134778899999988765321 0 2222 367788889888888888765
Q ss_pred H-HHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 003029 382 L-LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (856)
Q Consensus 382 L-~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~A 460 (856)
+ +|++.+.+ ++ +.++.++++ + +.+++++.++ +. + ..|++ .+.+ +++..+|+.|
T Consensus 200 l~~a~~~l~~--~~----~~~~~i~G~----g-~~~~l~~~~~----~~----~----~~v~~-~g~~--~~~~~~l~~a 253 (350)
T cd03785 200 VPEALAELLR--KR----LQVIHQTGK----G-DLEEVKKAYE----EL----G----VNYEV-FPFI--DDMAAAYAAA 253 (350)
T ss_pred HHHHHHHhhc--cC----eEEEEEcCC----c-cHHHHHHHHh----cc----C----CCeEE-eehh--hhHHHHHHhc
Confidence 5 77776642 22 334333322 2 2233433332 21 1 12553 5655 7899999999
Q ss_pred cEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC--------chhhc--cCCeEEECCC--CHHHHHHHHHHHHcCC
Q 003029 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG--------AAQSL--GAGAILVNPW--NITEVANAIARALNMS 528 (856)
Q Consensus 461 Dv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG--------~~~~l--g~~g~lVnP~--d~~~lA~ai~~aL~~~ 528 (856)
|+++.+| | +.+++|||+|+ .|+|++...| .++.+ +..|++|+|. |+++++++|.++++.
T Consensus 254 d~~v~~s---g-~~t~~Eam~~G----~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~- 324 (350)
T cd03785 254 DLVISRA---G-ASTVAELAALG----LPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSD- 324 (350)
T ss_pred CEEEECC---C-HhHHHHHHHhC----CCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcC-
Confidence 9999877 3 57899999994 8888876543 13444 3468999987 999999999999974
Q ss_pred HHHHHHHHHHHHHHHHhcCH
Q 003029 529 PEEREKRHWHNFTHVTTHTA 548 (856)
Q Consensus 529 ~~er~~r~~~~~~~v~~~~~ 548 (856)
++.+.++..++++++..+..
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~ 344 (350)
T cd03785 325 PERLKAMAEAARSLARPDAA 344 (350)
T ss_pred HHHHHHHHHHHHhcCCCCHH
Confidence 55677777777777655443
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=8.7e-11 Score=131.78 Aligned_cols=252 Identities=16% Similarity=0.084 Sum_probs=158.9
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (856)
..|+|+.|+....+.+. +..+..+.|+.++.|..+|.. .+.++ ...+|.+...+++. +. .
T Consensus 91 ~pDvv~~~~~~~~~~~~-~~~~~~~~p~v~~~~~~~~~~--------~~r~~--~~~~d~ii~~~~~~---~~----~-- 150 (357)
T PRK00726 91 KPDVVVGFGGYVSGPGG-LAARLLGIPLVIHEQNAVPGL--------ANKLL--ARFAKKVATAFPGA---FP----E-- 150 (357)
T ss_pred CCCEEEECCCcchhHHH-HHHHHcCCCEEEEcCCCCccH--------HHHHH--HHHhchheECchhh---hh----c--
Confidence 36999999855444433 333445678887666544421 01111 11356555444311 10 0
Q ss_pred CcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh-cCCceEEEeecccccCChHHHH-HHHHHH
Q 003029 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKL-LAFEKF 388 (856)
Q Consensus 311 g~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~V~Rld~~KGi~~~L-~Af~~~ 388 (856)
....++.++|+|||.+.+.+. ... ..+ .. .+.++|+.+|+....|++..++ +|+.++
T Consensus 151 ------------~~~~~i~vi~n~v~~~~~~~~----~~~---~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~ 209 (357)
T PRK00726 151 ------------FFKPKAVVTGNPVREEILALA----APP---ARL--AGREGKPTLLVVGGSQGARVLNEAVPEALALL 209 (357)
T ss_pred ------------cCCCCEEEECCCCChHhhccc----chh---hhc--cCCCCCeEEEEECCcHhHHHHHHHHHHHHHHh
Confidence 123578999999998765431 100 111 11 3678889999999999987776 888877
Q ss_pred HHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 003029 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (856)
Q Consensus 389 l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~ 468 (856)
.+. | ..++++|. ++ .+++.+.+ . . + .. |. +.+++ +++..+|+.||+++.+|
T Consensus 210 ~~~-~-----~~~~~~G~-----g~-~~~~~~~~----~-~----~---~~-v~-~~g~~--~~~~~~~~~~d~~i~~~- 260 (357)
T PRK00726 210 PEA-L-----QVIHQTGK-----GD-LEEVRAAY----A-A----G---IN-AE-VVPFI--DDMAAAYAAADLVICRA- 260 (357)
T ss_pred hhC-c-----EEEEEcCC-----Cc-HHHHHHHh----h-c----C---Cc-EE-EeehH--hhHHHHHHhCCEEEECC-
Confidence 432 2 23555543 22 12222222 1 1 1 11 44 46665 68999999999999887
Q ss_pred CcCCChhHHHHHhhcCCCCceEEEeCCCC--------chhhc--cCCeEEECCCC--HHHHHHHHHHHHcCCHHHHHHHH
Q 003029 469 RDGMNLVSYEFVACQDLKKGVLILSEFAG--------AAQSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRH 536 (856)
Q Consensus 469 ~EG~~Lv~lEama~~~~~~g~lVlSe~aG--------~~~~l--g~~g~lVnP~d--~~~lA~ai~~aL~~~~~er~~r~ 536 (856)
| +.+++|||+|+ .|+|++...| .++.+ +..|++++|.| +++++++|.+++++ ++.+..+.
T Consensus 261 --g-~~~~~Ea~~~g----~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~ 332 (357)
T PRK00726 261 --G-ASTVAELAAAG----LPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSD-PERLEAMA 332 (357)
T ss_pred --C-HHHHHHHHHhC----CCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcC-HHHHHHHH
Confidence 3 58899999994 7888875532 12334 34688998888 99999999999997 45777777
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHH
Q 003029 537 WHNFTHVTTHTAQEWAETFVSELN 560 (856)
Q Consensus 537 ~~~~~~v~~~~~~~W~~~fl~~l~ 560 (856)
++++++.+.++...-++.+++.++
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 333 EAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHhcCCcCHHHHHHHHHHHHhh
Confidence 888888777777777777766543
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.8e-11 Score=122.01 Aligned_cols=118 Identities=27% Similarity=0.313 Sum_probs=86.1
Q ss_pred EeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCC
Q 003029 368 GVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS 447 (856)
Q Consensus 368 ~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~ 447 (856)
++||+.+.||+..+++|+..+.+++|++ .++++|... + .. .....+... +. ...|.+ .+.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~----~~~i~G~~~--~-~~--~~~~~~~~~--------~~--~~~v~~-~~~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDL----KLVIAGDGP--E-RE--YLEELLAAL--------LL--LDRVIF-LGG 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCe----EEEEEeCCC--C-hH--HHHHHHHhc--------CC--cccEEE-eCC
Confidence 9999999999999999999998887764 588777432 1 11 111111111 11 124665 556
Q ss_pred C-CHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEE
Q 003029 448 L-DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILV 509 (856)
Q Consensus 448 v-~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lV 509 (856)
+ +.+++..+++.||++++||..||++++++|||+|+ .|+|+|+..+..+.+ +.+|++|
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g----~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACG----LPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCC----CCEEEcCCCCcceEEECCCceEEC
Confidence 5 55666777777999999999999999999999994 899999999988766 3456653
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.4e-11 Score=121.66 Aligned_cols=194 Identities=18% Similarity=0.218 Sum_probs=118.9
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc---CceEEe
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY---NLWLAA 666 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l---~lglia 666 (856)
..+|||+|+||||++...+| +.....|.+|. |.|..|++||..+...+..+-+.+ +..+|+
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~---------------~pA~pv~~el~-d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~ia 69 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEW---------------QPAAPVLLELK-DAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIA 69 (274)
T ss_pred cceEEEEcccCcccCCCCCC---------------CccchHHHHHH-HcCCeEEEeccchHHHHHHHHHhcCCCCCceee
Confidence 35899999999999964433 23566777877 479999999999999998888887 468999
Q ss_pred eCceEEEecCCeeeec--cc------ccCCh-HHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChh-hh------
Q 003029 667 ENGMFLRCTTGKWMTT--MP------EHLNM-EWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVE-FG------ 730 (856)
Q Consensus 667 enG~~i~~~~~~w~~~--~~------~~~~~-~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e-~~------ 730 (856)
|||+.|..+ +.|... .+ ..... .-.+.+++.++...+. -|. ..|.++|.+ ..
T Consensus 70 EnG~aI~~p-~~~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~-~g~----------~~~~~~d~~ei~e~TGlp 137 (274)
T COG3769 70 ENGAAIYLP-KGWFPFDGKPREISGISHIELGKVLEKIREKLDKLEEH-FGF----------TTFDDVDDEEIAEWTGLP 137 (274)
T ss_pred cCCceEEec-ccccccCCCCceecceEeeehhhhHHHHHHHHHHHHHH-hCe----------eEeccCCHHHHHHHhCCC
Confidence 999999842 223210 00 00000 0123333333332221 110 011122111 00
Q ss_pred -----HHHHH------------HHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceE
Q 003029 731 -----RIQAR------------DMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYV 793 (856)
Q Consensus 731 -----~~qa~------------el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~v 793 (856)
..+.. +...++ ...+....+++++|..+--|....-.||.|++.+++.+..- ....-+
T Consensus 138 re~aaLa~~rEyseti~~rs~d~~~~~~-~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl----~~~r~t 212 (274)
T COG3769 138 REQAALAMLREYSETIIWRSSDERMAQF-TARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRRL----GGARTT 212 (274)
T ss_pred hHHhHHHHHHHhhhheeecccchHHHHH-HHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHhc----CceeEE
Confidence 00001 111111 22223357889999888888888888999999999976521 223458
Q ss_pred EEEecCCcccccccccccccCcceEE
Q 003029 794 LCIGHFLGKNCNLPLQFLMQTISTVR 819 (856)
Q Consensus 794 la~GD~~~nDe~M~f~~~~~~~~~v~ 819 (856)
++.|| +.||.+| |+++ ..++.|+
T Consensus 213 ~~~GD-g~nD~Pl-~ev~-d~AfiV~ 235 (274)
T COG3769 213 LGLGD-GPNDAPL-LEVM-DYAFIVK 235 (274)
T ss_pred EecCC-CCCcccH-HHhh-hhheeec
Confidence 99999 9999999 9977 3455554
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.1e-09 Score=116.57 Aligned_cols=310 Identities=13% Similarity=0.200 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHHHHHH---HhcC-CCCEEEEeC--ccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHH
Q 003029 211 FAAYIKANQMFADVVN---KHYK-DGDVVWCHD--YHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 284 (856)
Q Consensus 211 w~~Y~~vN~~fa~~i~---~~~~-~~DvIwvHD--yhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ 284 (856)
|..+.-.-|+.+.-|+ .+++ ++| |||-. |.+. .|.+ |. +.+.|||...|.|--|.+.+..+-.|..- +
T Consensus 126 ~~hfTllgQaigsmIl~~Eai~r~~Pd-i~IDtMGY~fs-~p~~-r~-l~~~~V~aYvHYP~iS~DML~~l~qrq~s--~ 199 (465)
T KOG1387|consen 126 WKHFTLLGQAIGSMILAFEAIIRFPPD-IFIDTMGYPFS-YPIF-RR-LRRIPVVAYVHYPTISTDMLKKLFQRQKS--G 199 (465)
T ss_pred ccceehHHHHHHHHHHHHHHHHhCCch-heEecCCCcch-hHHH-HH-HccCceEEEEecccccHHHHHHHHhhhhc--c
Confidence 4444444444443333 2344 556 47743 4433 3333 22 56899999999998888876554332111 1
Q ss_pred hhcCCEEEEeCHHHHHHHHHH------HHHHhCcccC--CCce-e-eCCeeEEEEEeecccChhhhhhhhcCCchHHHHH
Q 003029 285 VLAADLVGFHTYDYARHFVSA------CTRILGFEGT--PEGV-E-DQGRLTRVAAFPIGIDSERFIRALEINPVQVHIK 354 (856)
Q Consensus 285 ll~aDlIgf~t~~~~~~Fl~~------~~~~lg~~~~--~~~v-~-~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~ 354 (856)
+..+---.|-|.|..- |..+.-+..+ .+.| + ++. ..+.++.+-.+++.+.....+
T Consensus 200 -----~l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~qiW~~--~~~~iVyPPC~~e~lks~~~t-------- 264 (465)
T KOG1387|consen 200 -----ILVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQIWQS--NTCSIVYPPCSTEDLKSKFGT-------- 264 (465)
T ss_pred -----hhhhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHHHhhc--cceeEEcCCCCHHHHHHHhcc--------
Confidence 1111122344444321 1111101100 0111 1 222 233333333555544332211
Q ss_pred HHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcC--ccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcc
Q 003029 355 ELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSD--WRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR 432 (856)
Q Consensus 355 ~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~--~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~ 432 (856)
.-.....+|+||.+.|.|+.. .|+-++.++.+.|. ....+.|+++|+ .|+.. ++ +.-+.++.++.+++-.
T Consensus 265 ----e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGS-cRnee-D~-ervk~Lkd~a~~L~i~ 336 (465)
T KOG1387|consen 265 ----EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGS-CRNEE-DE-ERVKSLKDLAEELKIP 336 (465)
T ss_pred ----cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEec-cCChh-hH-HHHHHHHHHHHhcCCc
Confidence 012457899999999999999 78888888888887 345688887764 45432 22 2334556666666543
Q ss_pred cCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchh-hc----c-CCe
Q 003029 433 FGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL----G-AGA 506 (856)
Q Consensus 433 ~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~-~l----g-~~g 506 (856)
..|.| ...+|.+++..+|..|.+.+-+-..|-||+.+.||||++ ..+|+-..+|-.- .+ | .+|
T Consensus 337 ------~~v~F-~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAG----lIpi~h~SgGP~lDIV~~~~G~~tG 405 (465)
T KOG1387|consen 337 ------KHVQF-EKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAG----LIPIVHNSGGPLLDIVTPWDGETTG 405 (465)
T ss_pred ------cceEE-EecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcC----ceEEEeCCCCCceeeeeccCCccce
Confidence 13664 789999999999999999999999999999999999993 4444444444332 22 4 368
Q ss_pred EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003029 507 ILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 507 ~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (856)
++. | +.++.|++|.+++++..++|..+.+.+|..+.+++-+...+.|...+...
T Consensus 406 Fla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kl 459 (465)
T KOG1387|consen 406 FLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICKL 459 (465)
T ss_pred eec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHh
Confidence 887 3 56789999999999999998888888899999888888777777655543
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.2e-10 Score=127.53 Aligned_cols=181 Identities=16% Similarity=0.127 Sum_probs=118.6
Q ss_pred EEeecccChhhhhhhhcCCchHHHHHHHHHHh-cCCceEEEeecccccCChHHH-HHHHHHHHHhCcCccCceEEEEEEc
Q 003029 329 AAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQK-LLAFEKFLEENSDWRGKVVLLQIAV 406 (856)
Q Consensus 329 ~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIl~V~Rld~~KGi~~~-L~Af~~~l~~~P~~~~~v~Lv~v~~ 406 (856)
.++|+|+|...+.+.. + ...+ .+ ++.++|+++||....|++..+ ++|++.+.+. ++ .++.+++
T Consensus 153 ~~i~n~v~~~~~~~~~--~-----~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~----~~~~~~g 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLPV--P-----RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GI----QIVHQTG 217 (348)
T ss_pred eEEcCCcCHHHhcccc--h-----hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--Cc----EEEEECC
Confidence 6889999976554210 0 0111 12 367789999998889997664 4788776542 22 2333432
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCC
Q 003029 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 486 (856)
Q Consensus 407 p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~ 486 (856)
+++. .. +++.+.+.+. ..++.+. . .++..+|+.||++|.+| | +.+++|||+|+
T Consensus 218 ----~~~~-~~----l~~~~~~~~l-------~~~v~~~---~-~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g--- 270 (348)
T TIGR01133 218 ----KNDL-EK----VKNVYQELGI-------EAIVTFI---D-ENMAAAYAAADLVISRA---G-ASTVAELAAAG--- 270 (348)
T ss_pred ----cchH-HH----HHHHHhhCCc-------eEEecCc---c-cCHHHHHHhCCEEEECC---C-hhHHHHHHHcC---
Confidence 2221 23 3333333221 1233333 2 37899999999999875 4 78999999994
Q ss_pred CceEEEeCCCCc-------hhhc--cCCeEEECCCC--HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHH
Q 003029 487 KGVLILSEFAGA-------AQSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (856)
Q Consensus 487 ~g~lVlSe~aG~-------~~~l--g~~g~lVnP~d--~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (856)
.|+|++...|. ++.+ +.+|++++|.| +++++++|.+++++ ++.++++.+++++++..+...++++
T Consensus 271 -~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 271 -VPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred -CCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCccHHHHHHh
Confidence 88998877552 2344 45799999876 99999999999975 5577777788888777776666554
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.1e-09 Score=123.34 Aligned_cols=252 Identities=15% Similarity=0.145 Sum_probs=144.2
Q ss_pred HhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhh--cCCEEEEeCHHHHHHHHH
Q 003029 227 KHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVS 304 (856)
Q Consensus 227 ~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll--~aDlIgf~t~~~~~~Fl~ 304 (856)
+..+ +|+|++|......+...+-....++|+++..+.. -+.+.+. |+.+++.+-+. .+|++.-.+....+++++
T Consensus 83 ~~~~-pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s~~~~~~l~~ 158 (365)
T TIGR00236 83 LEEK-PDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAPTEQAKDNLLR 158 (365)
T ss_pred HHcC-CCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCCCHHHHHHHHH
Confidence 3344 4999999544433433333333467876532221 1111111 12222222211 256665566655555442
Q ss_pred HHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhc-CCceEEEe-eccc-ccCChHHH
Q 003029 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA-GRKVMLGV-DRLD-MIKGIPQK 381 (856)
Q Consensus 305 ~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~iIl~V-~Rld-~~KGi~~~ 381 (856)
.|. ...+|.++++|+....+...... ....++++++ ++.+++.. .|.. ..||+..+
T Consensus 159 -----~G~-----------~~~~I~vign~~~d~~~~~~~~~-----~~~~~~~~~~~~~~~vl~~~hr~~~~~k~~~~l 217 (365)
T TIGR00236 159 -----ENV-----------KADSIFVTGNTVIDALLTNVEIA-----YSSPVLSEFGEDKRYILLTLHRRENVGEPLENI 217 (365)
T ss_pred -----cCC-----------CcccEEEeCChHHHHHHHHHhhc-----cchhHHHhcCCCCCEEEEecCchhhhhhHHHHH
Confidence 122 34578999999633322221110 1123444453 33455554 4643 45999999
Q ss_pred HHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 003029 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (856)
Q Consensus 382 L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~AD 461 (856)
++|+..+.+++|+++ +++++.|. +. .+.++. ..++. ...|+ +.+.++..++..+|+.||
T Consensus 218 l~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~~~---~~~~~------~~~v~-~~~~~~~~~~~~~l~~ad 276 (365)
T TIGR00236 218 FKAIREIVEEFEDVQ----IVYPVHLN----PV---VREPLH---KHLGD------SKRVH-LIEPLEYLDFLNLAANSH 276 (365)
T ss_pred HHHHHHHHHHCCCCE----EEEECCCC----hH---HHHHHH---HHhCC------CCCEE-EECCCChHHHHHHHHhCC
Confidence 999999988888753 55554332 11 112222 22211 12365 467889999999999999
Q ss_pred EEEECCCCcCCChhHHHHHhhcCCCCceEEEe-CCCCchhhc-cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHH
Q 003029 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKR 535 (856)
Q Consensus 462 v~v~~S~~EG~~Lv~lEama~~~~~~g~lVlS-e~aG~~~~l-g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r 535 (856)
+++.+| |.+.+|||+|+ .|+|.+ ..+|..+.+ ...++++ |.|+++++++|.++|+.+ +.+.++
T Consensus 277 ~vv~~S-----g~~~~EA~a~g----~PvI~~~~~~~~~e~~~~g~~~lv-~~d~~~i~~ai~~ll~~~-~~~~~~ 341 (365)
T TIGR00236 277 LILTDS-----GGVQEEAPSLG----KPVLVLRDTTERPETVEAGTNKLV-GTDKENITKAAKRLLTDP-DEYKKM 341 (365)
T ss_pred EEEECC-----hhHHHHHHHcC----CCEEECCCCCCChHHHhcCceEEe-CCCHHHHHHHHHHHHhCh-HHHHHh
Confidence 999888 55689999994 788886 455555544 2345666 589999999999999854 344433
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.22 E-value=8.1e-09 Score=122.66 Aligned_cols=182 Identities=14% Similarity=0.128 Sum_probs=123.6
Q ss_pred CCceEEEeecccccCChHHHHHHHHHHHH--hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcc
Q 003029 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLE--ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~~L~Af~~~l~--~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~ 439 (856)
+.++|.+|.|+...||.+.++.+++++++ .+|+ ..+.+|+.|.+...+.. -+++.+.+.+++.+ -.|. +
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~--~pvq~V~~Gka~p~d~~-gk~~i~~i~~la~~--~~~~--~-- 458 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPE--RPVQIVFAGKAHPADGE-GKEIIQRIVEFSKR--PEFR--G-- 458 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCcccch-HHHHHHHHHHHHhc--ccCC--C--
Confidence 45688999999999999999999999985 5555 24778877765433322 23455556555442 0021 1
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEE-CCC-CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECC----
Q 003029 440 PIHHLDRSLDFPALCALYAVTDVALV-TSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP---- 511 (856)
Q Consensus 440 pV~~~~g~v~~~el~aly~~ADv~v~-~S~-~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP---- 511 (856)
.|.|+.+ .+..--..+|.+||+++. ||. +|..|+.-+=||.- |.|-.|-.-|...+. +.+|+.+.+
T Consensus 459 kv~f~~~-Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n-----GgL~~sv~DG~~~E~~~~~nGf~f~~~~~~ 532 (601)
T TIGR02094 459 RIVFLEN-YDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN-----GVLNLSILDGWWGEGYDGDNGWAIGDGEEY 532 (601)
T ss_pred CEEEEcC-CCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc-----CCceeecccCcccccCCCCcEEEECCCccc
Confidence 4676554 466666778999999999 888 99999999999985 778888877776654 568999985
Q ss_pred --------CCHHHHHHHHHHHH-----cCC----HHHHHHHHHHHHHH-HHhcCHHHHHHHHHHH
Q 003029 512 --------WNITEVANAIARAL-----NMS----PEEREKRHWHNFTH-VTTHTAQEWAETFVSE 558 (856)
Q Consensus 512 --------~d~~~lA~ai~~aL-----~~~----~~er~~r~~~~~~~-v~~~~~~~W~~~fl~~ 558 (856)
.|.+++-++|.+++ +.+ +....+++++.... ...++|.+=++.+.+.
T Consensus 533 ~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~ 597 (601)
T TIGR02094 533 DDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDK 597 (601)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 89999999998877 221 11223333333222 2246766666666543
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.2e-09 Score=122.33 Aligned_cols=266 Identities=11% Similarity=0.062 Sum_probs=155.8
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHH
Q 003029 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVS 304 (856)
Q Consensus 225 i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~ 304 (856)
+++..+ +|+|+++.. ...+..+.+....++|+. ++++-+..... | + --.+|.+...+....+.+..
T Consensus 99 ~l~~~k-PDvVi~~~p-~~~~~~l~~~~~~~iP~~-~v~td~~~~~~-----w---~---~~~~d~~~v~s~~~~~~l~~ 164 (391)
T PRK13608 99 LLIKEK-PDLILLTFP-TPVMSVLTEQFNINIPVA-TVMTDYRLHKN-----W---I---TPYSTRYYVATKETKQDFID 164 (391)
T ss_pred HHHHhC-cCEEEECCc-HHHHHHHHHhcCCCCCEE-EEeCCCCcccc-----c---c---cCCCCEEEECCHHHHHHHHH
Confidence 333344 589888522 223333333334467774 34444311100 1 1 12578877777654444332
Q ss_pred HHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCc-eEEEeecccccCChHH
Q 003029 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRK-VMLGVDRLDMIKGIPQ 380 (856)
Q Consensus 305 ~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~-iIl~V~Rld~~KGi~~ 380 (856)
.|. ...+|.++++.|+.. |.+.. + ...+++++ ++++ +++++||+...||+..
T Consensus 165 -----~gi-----------~~~ki~v~GiPv~~~-f~~~~---~----~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~ 220 (391)
T PRK13608 165 -----VGI-----------DPSTVKVTGIPIDNK-FETPI---D----QKQWLIDNNLDPDKQTILMSAGAFGVSKGFDT 220 (391)
T ss_pred -----cCC-----------CHHHEEEECeecChH-hcccc---c----HHHHHHHcCCCCCCCEEEEECCCcccchhHHH
Confidence 122 234566666667643 43211 1 12334444 2444 5667999999999999
Q ss_pred HHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 003029 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (856)
Q Consensus 381 ~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~A 460 (856)
+++++ ++..|++ .++++++. .+ ++.+++.+.. +.. ..|+ +.|++ +++..+|++|
T Consensus 221 li~~~---~~~~~~~----~~vvv~G~----~~---~l~~~l~~~~---~~~------~~v~-~~G~~--~~~~~~~~~a 274 (391)
T PRK13608 221 MITDI---LAKSANA----QVVMICGK----SK---ELKRSLTAKF---KSN------ENVL-ILGYT--KHMNEWMASS 274 (391)
T ss_pred HHHHH---HhcCCCc----eEEEEcCC----CH---HHHHHHHHHh---ccC------CCeE-EEecc--chHHHHHHhh
Confidence 99985 3344543 46556532 12 1223333221 110 1354 46665 5799999999
Q ss_pred cEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchh-----hccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHH
Q 003029 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ-----SLGAGAILVNPWNITEVANAIARALNMSPEEREKR 535 (856)
Q Consensus 461 Dv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~-----~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r 535 (856)
|+++.. +.|+++.|||||+ .|+|++...+..+ .+.+.|.-+.+.|+++++++|.++++++ +.+.++
T Consensus 275 Dl~I~k----~gg~tl~EA~a~G----~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~~~~~l~~~i~~ll~~~-~~~~~m 345 (391)
T PRK13608 275 QLMITK----PGGITISEGLARC----IPMIFLNPAPGQELENALYFEEKGFGKIADTPEEAIKIVASLTNGN-EQLTNM 345 (391)
T ss_pred hEEEeC----CchHHHHHHHHhC----CCEEECCCCCCcchhHHHHHHhCCcEEEeCCHHHHHHHHHHHhcCH-HHHHHH
Confidence 999863 4589999999994 8899885432222 1123333334669999999999999864 577777
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHhH
Q 003029 536 HWHNFTHVTTHTAQEWAETFVSELNDTV 563 (856)
Q Consensus 536 ~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 563 (856)
.+++++....+++..-++.+++.+....
T Consensus 346 ~~~~~~~~~~~s~~~i~~~l~~l~~~~~ 373 (391)
T PRK13608 346 ISTMEQDKIKYATQTICRDLLDLIGHSS 373 (391)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHhhhhh
Confidence 7888888888888888888877766543
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.9e-09 Score=120.92 Aligned_cols=244 Identities=15% Similarity=0.064 Sum_probs=139.8
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (856)
..|+|++|.+....++..+..+..++|+.++.|.-. +.+ +..|+........-.+|.+...+....+++.+
T Consensus 88 ~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~-s~~--~~~~~~~~r~~~~~~ad~~~~~s~~~~~~l~~------ 158 (363)
T cd03786 88 KPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLR-SFD--RGMPDEENRHAIDKLSDLHFAPTEEARRNLLQ------ 158 (363)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccc-cCC--CCCCchHHHHHHHHHhhhccCCCHHHHHHHHH------
Confidence 459999998766555555544445788876554211 000 01121110000111345544444433333321
Q ss_pred CcccCCCceeeCCeeEEEEEeeccc-ChhhhhhhhcCCchHHHHHHHHHHh--c-CCceEEEeecccc---cCChHHHHH
Q 003029 311 GFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETF--A-GRKVMLGVDRLDM---IKGIPQKLL 383 (856)
Q Consensus 311 g~~~~~~~v~~~g~~~~v~viP~GI-D~~~f~~~~~~~~~~~~~~~lr~~~--~-~~~iIl~V~Rld~---~KGi~~~L~ 383 (856)
.+....+|.++++++ |...+.+..... ...++.+ . ++.+++.++|+.. .||+..+++
T Consensus 159 ----------~G~~~~kI~vign~v~d~~~~~~~~~~~------~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~~ 222 (363)
T cd03786 159 ----------EGEPPERIFVVGNTMIDALLRLLELAKK------ELILELLGLLPKKYILVTLHRVENVDDGEQLEEILE 222 (363)
T ss_pred ----------cCCCcccEEEECchHHHHHHHHHHhhcc------chhhhhcccCCCCEEEEEeCCccccCChHHHHHHHH
Confidence 122345788888885 654433221100 1112222 2 3457778999875 799999999
Q ss_pred HHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 003029 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (856)
Q Consensus 384 Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~ 463 (856)
|++.+.+. + +.++..+. .+....+++. +.+.+.. ...|. +.+....+++..+|+.||++
T Consensus 223 al~~l~~~--~----~~vi~~~~-----~~~~~~l~~~----~~~~~~~-----~~~v~-~~~~~~~~~~~~l~~~ad~~ 281 (363)
T cd03786 223 ALAELAEE--D----VPVVFPNH-----PRTRPRIREA----GLEFLGH-----HPNVL-LISPLGYLYFLLLLKNADLV 281 (363)
T ss_pred HHHHHHhc--C----CEEEEECC-----CChHHHHHHH----HHhhccC-----CCCEE-EECCcCHHHHHHHHHcCcEE
Confidence 99987432 2 33443322 2222333333 3332210 01355 46667789999999999999
Q ss_pred EECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhccCCeEEECCC-CHHHHHHHHHHHHcCCH
Q 003029 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW-NITEVANAIARALNMSP 529 (856)
Q Consensus 464 v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~-d~~~lA~ai~~aL~~~~ 529 (856)
|.+|- | +..|||+|+ .|+|++...+....+..+|+.+.+. |+++++++|.++++++.
T Consensus 282 v~~Sg----g-i~~Ea~~~g----~PvI~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 282 LTDSG----G-IQEEASFLG----VPVLNLRDRTERPETVESGTNVLVGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred EEcCc----c-HHhhhhhcC----CCEEeeCCCCccchhhheeeEEecCCCHHHHHHHHHHHhcCch
Confidence 99994 4 479999994 8888887655444443556555443 79999999999998754
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.6e-08 Score=118.57 Aligned_cols=261 Identities=12% Similarity=0.079 Sum_probs=166.9
Q ss_pred cCCCCEEE--EeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHH
Q 003029 229 YKDGDVVW--CHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSAC 306 (856)
Q Consensus 229 ~~~~DvIw--vHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~ 306 (856)
..++|++. ++.-|... +....|..++.+..|+ -+. ........+..+..+|.|...|..-.+......
T Consensus 222 ~~~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~-~~~-----~~~~y~~~l~~~~~~d~iIv~T~~q~~~l~~~~ 291 (519)
T TIGR03713 222 VKDDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS-ERN-----RHHTYLDLYESLSRADLIIVDREDIERLLEENY 291 (519)
T ss_pred CCCCCEEEEEcCchhhhh----HhhcCccceEEEEecc-Ccc-----cccchhhhhhChhhcCeEEEcCHHHHHHHHHHh
Confidence 56788888 67777665 3333443444446665 111 001124566677788877776754333332211
Q ss_pred HHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHH
Q 003029 307 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFE 386 (856)
Q Consensus 307 ~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~ 386 (856)
.. .. ...+|..+|++.- . .... ..++..++.|.+++||| +.|-+..+|+|+.
T Consensus 292 ~~------------~~-~~~~v~~Ip~~~~-~-~~~~------------~s~r~~~~~I~v~idrL-~ek~~~~~I~av~ 343 (519)
T TIGR03713 292 RE------------NY-VEFDISRITPFDT-R-LRLG------------QSQQLYETEIGFWIDGL-SDEELQQILQQLL 343 (519)
T ss_pred hh------------cc-cCCcceeeCccce-E-EecC------------hhhcccceEEEEEcCCC-ChHHHHHHHHHHH
Confidence 10 00 1234556776544 1 1110 01223355566666699 9999999999999
Q ss_pred HHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC----------------------cccEEEe
Q 003029 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT----------------------AVPIHHL 444 (856)
Q Consensus 387 ~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~----------------------~~pV~~~ 444 (856)
++.+++|+.. |.+.|... .. ++.+.+++++.++|..++... -...+.|
T Consensus 344 ~~~~~~p~~~----L~~~gy~~---~~---~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f 413 (519)
T TIGR03713 344 QYILKNPDYE----LKILTYNN---DN---DITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERIAF 413 (519)
T ss_pred HHHhhCCCeE----EEEEEecC---ch---hHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhcccccEEEE
Confidence 9999999854 66565432 11 234566666666655532100 0024446
Q ss_pred CCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHH
Q 003029 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIA 522 (856)
Q Consensus 445 ~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~ 522 (856)
.|..+..++.+.|..|.++|.+|..|||+ ..+||++. |.|.| .-|.++.+ |.+|++| .|..++++||.
T Consensus 414 ~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~----GiPqI---nyg~~~~V~d~~NG~li--~d~~~l~~al~ 483 (519)
T TIGR03713 414 TTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISA----GIPQI---NKVETDYVEHNKNGYII--DDISELLKALD 483 (519)
T ss_pred EecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHc----CCCee---ecCCceeeEcCCCcEEe--CCHHHHHHHHH
Confidence 88888889999999999999999999999 99999998 35666 55667777 7899999 79999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHHHHhcCH
Q 003029 523 RALNMSPEEREKRHWHNFTHVTTHTA 548 (856)
Q Consensus 523 ~aL~~~~~er~~r~~~~~~~v~~~~~ 548 (856)
.+|+.+. ...+......+.+.+++.
T Consensus 484 ~~L~~~~-~wn~~~~~sy~~~~~yS~ 508 (519)
T TIGR03713 484 YYLDNLK-NWNYSLAYSIKLIDDYSS 508 (519)
T ss_pred HHHhCHH-HHHHHHHHHHHHHHHhhH
Confidence 9998654 455555555665555544
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.8e-08 Score=112.45 Aligned_cols=240 Identities=14% Similarity=0.031 Sum_probs=145.0
Q ss_pred HHHhcCCCCEEEEeCccchh--HHH-HHHh-cCCCCeEEEEEecCCCchhhhhcCc-ccHHHHHHhhcCCEEEEeCHHHH
Q 003029 225 VNKHYKDGDVVWCHDYHLMF--LPK-CLKE-YNSDMKVGWFLHTPFPSSEIHRTLP-SRSDLLRAVLAADLVGFHTYDYA 299 (856)
Q Consensus 225 i~~~~~~~DvIwvHDyhl~l--lp~-~lr~-~~~~~~i~~flH~PfP~~e~fr~lp-~~~~il~~ll~aDlIgf~t~~~~ 299 (856)
+....++||+|++|..-+.. ++. +++. +..++++++++|--+|-. +.... ........+-.||.|..++....
T Consensus 58 ~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~--~~~~~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLR--FDSNYYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHh--ccccchhhHHHHHHHHhCCEEEECCHHHH
Confidence 45567899999999854432 222 2222 112799999999876532 11111 12223344557899999988765
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChH
Q 003029 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 379 (856)
Q Consensus 300 ~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~ 379 (856)
+.+.+ .|. ...++.++|+..++..... +....+++.|+++||+....++.
T Consensus 136 ~~l~~-----~g~-----------~~~~i~~~~~~~~~~~~~~--------------~~~~~~~~~i~yaG~l~k~~~l~ 185 (333)
T PRK09814 136 DRLVE-----EGL-----------TTDKIIVQGIFDYLNDIEL--------------VKTPSFQKKINFAGNLEKSPFLK 185 (333)
T ss_pred HHHHH-----cCC-----------CcCceEecccccccccccc--------------cccccCCceEEEecChhhchHHH
Confidence 55432 122 1223444444333211100 01123456899999999443211
Q ss_pred HHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 003029 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (856)
Q Consensus 380 ~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ 459 (856)
+..|+ +.|+++|.+ ++.. .. ...|.| .|.++.+++..+|+.
T Consensus 186 ----------~~~~~----~~l~i~G~g-----~~~~-----------~~--------~~~V~f-~G~~~~eel~~~l~~ 226 (333)
T PRK09814 186 ----------NWSQG----IKLTVFGPN-----PEDL-----------EN--------SANISY-KGWFDPEELPNELSK 226 (333)
T ss_pred ----------hcCCC----CeEEEECCC-----cccc-----------cc--------CCCeEE-ecCCCHHHHHHHHhc
Confidence 12344 457777632 2110 00 113664 899999999999998
Q ss_pred ccEEEECCC-----------CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHc
Q 003029 460 TDVALVTSL-----------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN 526 (856)
Q Consensus 460 ADv~v~~S~-----------~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~ 526 (856)
|+++++.- .-.++--..||||| |.|+|++..++.++.+ +..|++|+ +.++++++|..+
T Consensus 227 -~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~----G~PVI~~~~~~~~~~V~~~~~G~~v~--~~~el~~~l~~~-- 297 (333)
T PRK09814 227 -GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAA----GLPVIVWSKAAIADFIVENGLGFVVD--SLEELPEIIDNI-- 297 (333)
T ss_pred -CcCeEEcCCCCCccchhhhhccchHHHHHHHHC----CCCEEECCCccHHHHHHhCCceEEeC--CHHHHHHHHHhc--
Confidence 76666432 12345558899999 4999999999999888 45799997 678999999874
Q ss_pred CCHHHHHHHHHHHHHHHHh
Q 003029 527 MSPEEREKRHWHNFTHVTT 545 (856)
Q Consensus 527 ~~~~er~~r~~~~~~~v~~ 545 (856)
+++++.++.++.++....
T Consensus 298 -~~~~~~~m~~n~~~~~~~ 315 (333)
T PRK09814 298 -TEEEYQEMVENVKKISKL 315 (333)
T ss_pred -CHHHHHHHHHHHHHHHHH
Confidence 356777766666665543
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.07 E-value=6.2e-10 Score=106.61 Aligned_cols=130 Identities=25% Similarity=0.318 Sum_probs=89.6
Q ss_pred CceEEEeecccccCChHHHHH-HHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003029 363 RKVMLGVDRLDMIKGIPQKLL-AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (856)
Q Consensus 363 ~~iIl~V~Rld~~KGi~~~L~-Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (856)
..+|++.|++.+.||+..+++ |++++.+++|+ +.|.++|.. ++ +++++ .. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~----~~l~i~G~~-----~~------~l~~~-~~----------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPD----IELIIIGNG-----PD------ELKRL-RR----------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTT----EEEEEECES-----S-------HHCCH-HH----------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcC----EEEEEEeCC-----HH------HHHHh-cC----------CCE
Confidence 357899999999999999999 99999999987 457777642 22 12222 01 136
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCC-CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHH
Q 003029 442 HHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 518 (856)
Q Consensus 442 ~~~~g~v~~~el~aly~~ADv~v~~S~-~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA 518 (856)
.+ .+.+ +++.++|+.||+++.|+. .++++..++|||++| .|+|+|.. |....+ ...++++ +.|+++++
T Consensus 56 ~~-~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G----~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~ 126 (135)
T PF13692_consen 56 RF-HGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAG----KPVIASDN-GAEGIVEEDGCGVLV-ANDPEELA 126 (135)
T ss_dssp EE-E-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT------EEEEHH-HCHCHS---SEEEE--TT-HHHHH
T ss_pred EE-cCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhC----CCEEECCc-chhhheeecCCeEEE-CCCHHHHH
Confidence 65 6777 689999999999999985 789999999999994 89999888 555555 2456677 89999999
Q ss_pred HHHHHHHcC
Q 003029 519 NAIARALNM 527 (856)
Q Consensus 519 ~ai~~aL~~ 527 (856)
++|.+++++
T Consensus 127 ~~i~~l~~d 135 (135)
T PF13692_consen 127 EAIERLLND 135 (135)
T ss_dssp HHHHHHHH-
T ss_pred HHHHHHhcC
Confidence 999999863
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.5e-08 Score=112.81 Aligned_cols=150 Identities=19% Similarity=0.184 Sum_probs=97.9
Q ss_pred HHHHhc---CCceE-EEee-cccccCC-hHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHh
Q 003029 356 LQETFA---GRKVM-LGVD-RLDMIKG-IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 429 (856)
Q Consensus 356 lr~~~~---~~~iI-l~V~-Rld~~KG-i~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~I 429 (856)
+++.++ ++++| +..| |....|+ ++.+++|++.+.+++|++ .+++++. +.+.. +++++++.+.
T Consensus 176 ~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~----~~ii~~~----~~~~~----~~~~~~~~~~ 243 (380)
T PRK00025 176 ARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDL----RFVLPLV----NPKRR----EQIEEALAEY 243 (380)
T ss_pred HHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCe----EEEEecC----ChhhH----HHHHHHHhhc
Confidence 444453 45543 4334 7766554 788999999998888764 3665643 12222 3333333321
Q ss_pred hcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEe----------------
Q 003029 430 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS---------------- 493 (856)
Q Consensus 430 N~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlS---------------- 493 (856)
. | . .+.++. .++..+|+.||+++++| |.+.+|+|+|+ .|+|++
T Consensus 244 ~---~---~-~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G----~PvI~~~~~~~~~~~~~~~~~~ 302 (380)
T PRK00025 244 A---G---L-EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLK----VPMVVGYKVSPLTFWIAKRLVK 302 (380)
T ss_pred C---C---C-CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhC----CCEEEEEccCHHHHHHHHHHHc
Confidence 0 1 1 244433 47899999999999998 78889999994 888887
Q ss_pred -CCCCchhhccC----CeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 003029 494 -EFAGAAQSLGA----GAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (856)
Q Consensus 494 -e~aG~~~~lg~----~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~ 539 (856)
.+.|.++.+.. .+++.++.|+++++++|.++|++++ .+.++.+++
T Consensus 303 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~~~ 352 (380)
T PRK00025 303 VPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGA-RRQALLEGF 352 (380)
T ss_pred CCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHH-HHHHHHHHH
Confidence 45555666622 2467788899999999999998653 555555554
|
|
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.4e-08 Score=100.50 Aligned_cols=220 Identities=16% Similarity=0.216 Sum_probs=150.2
Q ss_pred HHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc--C-
Q 003029 585 RYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--N- 661 (856)
Q Consensus 585 ~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l--~- 661 (856)
++++-..-|+.||.||||++. ..+++|++.+.|++|.+ ..++-++-|.+++-+.+.++.- +
T Consensus 5 a~~r~~~~l~lfdvdgtLt~~--------------r~~~~~e~~~~l~~lr~--~v~ig~VggsDl~k~~eqlG~~Vl~~ 68 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTPP--------------RQKVTPEMLEFLQKLRK--KVTIGFVGGSDLSKQQEQLGDNVLEE 68 (252)
T ss_pred hhhcCCceEEEEecCCccccc--------------cccCCHHHHHHHHHHhh--heEEEEeecHHHHHHHHHhchhHHhh
Confidence 344455669999999999987 56789999999999874 8999999999888888888552 3
Q ss_pred -ceEEeeCceEEEecCCeeeecccccCChHHH--HHHHHH----HHHHHhc----CCCcEEeeecceEEEEe--ecCCh-
Q 003029 662 -LWLAAENGMFLRCTTGKWMTTMPEHLNMEWV--DSLKHV----FEYFTER----TPRSHFEQRETSLVWNY--KYADV- 727 (856)
Q Consensus 662 -lgliaenG~~i~~~~~~w~~~~~~~~~~~w~--~~v~~i----~~~~~~r----t~gs~ie~k~~si~~~y--~~~d~- 727 (856)
.+.-+|||..-...++... ...-..|. +.++++ +.+..+- ..|.+||-++..+.+.- |+|..
T Consensus 69 fDY~F~ENGl~~yk~gk~~~----~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~E 144 (252)
T KOG3189|consen 69 FDYVFSENGLVAYKGGKLLS----KQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQE 144 (252)
T ss_pred hcccccCCCeeEeeCCcchh----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHH
Confidence 4788999998764433211 00111222 223333 3333321 34889998777665543 44432
Q ss_pred ---hhhHH-----HHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEec
Q 003029 728 ---EFGRI-----QARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (856)
Q Consensus 728 ---e~~~~-----qa~el~~~L~~~~~~~~~v~v~~-g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD 798 (856)
+|... ....+.+.| ++-+....+..-- |.-+++|-|.|++|-..+++|-++ | .+.+-.|||
T Consensus 145 ER~eF~e~Dkk~~iR~K~v~~L-r~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-g--------f~~IhFFGD 214 (252)
T KOG3189|consen 145 ERNEFEELDKKHKIREKFVEAL-REEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-G--------FDTIHFFGD 214 (252)
T ss_pred HHHHHHHhhhhhhhHHHHHHHH-HHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc-C--------CceEEEecc
Confidence 22211 112344555 3333455666544 456899999999999999887654 3 689999999
Q ss_pred CCcccccccccccccCcceEEeCCCCc-cccCCHHHHHHHHHHHHH
Q 003029 799 FLGKNCNLPLQFLMQTISTVRLDSSFL-HYLRMKMCMRFLSQNYLM 843 (856)
Q Consensus 799 ~~~nDe~M~f~~~~~~~~~v~V~~~~~-~~l~~~~~~~~~l~~~~~ 843 (856)
..| -++....|.+++.+. |++.+|+|..+.++++++
T Consensus 215 -----kT~----~GGNDyEIf~dprtiGhsV~~PdDT~~~~~~if~ 251 (252)
T KOG3189|consen 215 -----KTM----PGGNDYEIFADPRTIGHSVTSPDDTVRICEEIFK 251 (252)
T ss_pred -----ccC----CCCCcceeeeCCccccccccCchHHHHHHHHHhc
Confidence 344 456678888888888 999999999999998874
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=98.92 E-value=5.7e-07 Score=103.95 Aligned_cols=305 Identities=17% Similarity=0.193 Sum_probs=153.3
Q ss_pred EEEEeCccchhHHHHHHhcCCCCeEEEEEecCCC-------chhhhhcCcc---cH-----------HHHHH-hhcCCEE
Q 003029 234 VVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP-------SSEIHRTLPS---RS-----------DLLRA-VLAADLV 291 (856)
Q Consensus 234 vIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP-------~~e~fr~lp~---~~-----------~il~~-ll~aDlI 291 (856)
+.+.|.|..-+-..++|.+.|++.-.|+.|---+ ..++|..|+. .+ -+-+. -..||..
T Consensus 146 iaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~AdvF 225 (633)
T PF05693_consen 146 IAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYADVF 225 (633)
T ss_dssp EEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHSSEE
T ss_pred EEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhcCee
Confidence 3377888877777789999999999999996432 1123333331 00 11111 2233443
Q ss_pred EEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhc----CCchHHHHHHH-HHHh-c----
Q 003029 292 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALE----INPVQVHIKEL-QETF-A---- 361 (856)
Q Consensus 292 gf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~----~~~~~~~~~~l-r~~~-~---- 361 (856)
-.-+.--+. .|..+|+ |. .=.|.|||+|.+.|....+ ....++++.++ +..+ +
T Consensus 226 TTVSeITa~----Ea~~LL~------------r~-pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~df 288 (633)
T PF05693_consen 226 TTVSEITAK----EAEHLLK------------RK-PDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDF 288 (633)
T ss_dssp EESSHHHHH----HHHHHHS------------S---SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S
T ss_pred eehhhhHHH----HHHHHhC------------CC-CCEEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 322221111 1222332 21 1136799999887754311 00122333333 2222 1
Q ss_pred --CCceEEE-eeccc-ccCChHHHHHHHHHHHH---h-CcCccCceEEEEEEcCCCCCh---H------HHHHHHHHHHH
Q 003029 362 --GRKVMLG-VDRLD-MIKGIPQKLLAFEKFLE---E-NSDWRGKVVLLQIAVPTRTDV---P------EYQRLTSQVHE 424 (856)
Q Consensus 362 --~~~iIl~-V~Rld-~~KGi~~~L~Af~~~l~---~-~P~~~~~v~Lv~v~~p~r~~~---~------~~~~l~~~l~~ 424 (856)
++.++++ .||.+ ..||++..|+|+.+|-. . ..+ ..|+.+ +-.|+.... + -+.+|++-+.+
T Consensus 289 d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~--~tVVaF-ii~pa~~~~~~ve~l~~~a~~~~l~~t~~~ 365 (633)
T PF05693_consen 289 DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSD--KTVVAF-IIVPAKTNSFNVESLKGQAVTKQLRDTVDE 365 (633)
T ss_dssp -GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S---EEEEE-EE---SEEEE-HHHHHHHHHHHHHHHHHHH
T ss_pred CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCC--CeEEEE-EEecCccCCcCHHHHhhHHHHHHHHHHHHH
Confidence 3455444 89999 57999999999998743 2 222 124433 334554321 1 01223322222
Q ss_pred HHHHhhcc--------------------------------------------------------------c-CCCCcccE
Q 003029 425 IVGRINGR--------------------------------------------------------------F-GTLTAVPI 441 (856)
Q Consensus 425 lv~~IN~~--------------------------------------------------------------~-g~~~~~pV 441 (856)
+..+|..+ + ...+...|
T Consensus 366 i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKV 445 (633)
T PF05693_consen 366 IQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKV 445 (633)
T ss_dssp HHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEE
T ss_pred HHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEE
Confidence 22222110 0 00122345
Q ss_pred EEeCCCCCH------HHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc-------cCCeEE
Q 003029 442 HHLDRSLDF------PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-------GAGAIL 508 (856)
Q Consensus 442 ~~~~g~v~~------~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l-------g~~g~l 508 (856)
+|...+++. -++..+.+.+|+.|+||+||++|.+++|+.|+ +.|-|.|+.+|....+ ...|+.
T Consensus 446 IF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~----gVPsITTnLsGFG~~~~~~~~~~~~~GV~ 521 (633)
T PF05693_consen 446 IFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAF----GVPSITTNLSGFGCWMQEHIEDPEEYGVY 521 (633)
T ss_dssp EE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHT----T--EEEETTBHHHHHHHTTS-HHGGGTEE
T ss_pred EEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhc----CCceeeccchhHHHHHHHhhccCcCCcEE
Confidence 555444433 46788999999999999999999999999999 4899999999988655 134665
Q ss_pred E-CC--CC----HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003029 509 V-NP--WN----ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 509 V-nP--~d----~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (856)
| += .+ ++++|+.|.....++..+|.....+..+.....+|..-...+.+....+
T Consensus 522 VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~A 582 (633)
T PF05693_consen 522 VVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLA 582 (633)
T ss_dssp EE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 5 22 23 3566777777788888777776666655556666666555555544433
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=98.91 E-value=6.7e-07 Score=108.46 Aligned_cols=182 Identities=16% Similarity=0.113 Sum_probs=120.5
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHH--hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003029 364 KVMLGVDRLDMIKGIPQKLLAFEKFLE--ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (856)
Q Consensus 364 ~iIl~V~Rld~~KGi~~~L~Af~~~l~--~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (856)
.+|.++.|+...||...++..++++.+ .+|+ ..+.+|..|.+...+.. -+++.+.+.+++.. -+|. ..|
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~~-gK~iIk~i~~~a~~--p~~~----~kV 549 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADEP-GKELIQEIVEFSRR--PEFR----GRI 549 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccchH-HHHHHHHHHHHHhC--cCCC----CcE
Confidence 378899999999999999999999865 2444 24778877755433322 13445555555431 0221 147
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECC------
Q 003029 442 HHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP------ 511 (856)
Q Consensus 442 ~~~~g~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP------ 511 (856)
+|+.+ .+-.--..++..|||++.||. .|.-|+.-+=||.- |+|-+|..-|.-.+. |.+|..+.+
T Consensus 550 vfle~-Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~N-----G~LnlSvlDGww~E~~~g~nGwaig~~~~~~~ 623 (778)
T cd04299 550 VFLED-YDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALN-----GGLNLSVLDGWWDEGYDGENGWAIGDGDEYED 623 (778)
T ss_pred EEEcC-CCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHc-----CCeeeecccCccccccCCCCceEeCCCccccC
Confidence 76554 466666778999999999999 99999999998885 889999888877766 678999988
Q ss_pred ------CCHHHHHHHHHHHHc----CC-----HHHHHHHHHHHHH-HHHhcCHHHHHHHHHHHHH
Q 003029 512 ------WNITEVANAIARALN----MS-----PEEREKRHWHNFT-HVTTHTAQEWAETFVSELN 560 (856)
Q Consensus 512 ------~d~~~lA~ai~~aL~----~~-----~~er~~r~~~~~~-~v~~~~~~~W~~~fl~~l~ 560 (856)
.|.+++.+.|.+.+- .. +.+..+++++... ..-.+++.+=++.|++.+.
T Consensus 624 ~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 624 DEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred hhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 455555566644332 10 1233344433322 2245666666666666554
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5 | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.1e-08 Score=102.47 Aligned_cols=193 Identities=16% Similarity=0.238 Sum_probs=118.7
Q ss_pred HHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhc-c-c---CceEEeeCceEEEecC-CeeeecccccCChHHHHH-HHHHH
Q 003029 627 LKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ-E-Y---NLWLAAENGMFLRCTT-GKWMTTMPEHLNMEWVDS-LKHVF 699 (856)
Q Consensus 627 ~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~-~-l---~lgliaenG~~i~~~~-~~w~~~~~~~~~~~w~~~-v~~i~ 699 (856)
+.+.|++|.+ +..|.|+||-.+.-+++.+. . + -.++-++||..++..+ ..|...+.+.+..+-... +..++
T Consensus 1 M~~~L~~L~~--~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKLRK--KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHHHT--TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHh--cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 4678899985 79999999999999998884 3 2 2589999999877544 346443322222222222 22222
Q ss_pred HHHHh----cCCCcEEeeecceEEEEe--ecCChh----hhHH-----HHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEE
Q 003029 700 EYFTE----RTPRSHFEQRETSLVWNY--KYADVE----FGRI-----QARDMLQHLWTGPISNASVEVVQ-GSKSVEVR 763 (856)
Q Consensus 700 ~~~~~----rt~gs~ie~k~~si~~~y--~~~d~e----~~~~-----qa~el~~~L~~~~~~~~~v~v~~-g~~~vEV~ 763 (856)
++..+ ...|.+||.+...|.+.- ++|..+ |..+ ..+.+.+.| ++.+....+++.. |.-+++|.
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L-~~~f~d~~L~~siGGqiSiDvf 157 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEAL-KKEFPDFGLTFSIGGQISIDVF 157 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHH-HHHTCCCSEEEEEETTTEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHH-HHHCCCCceEEecCCceEEccc
Confidence 33221 135899999999998864 344321 2111 012355555 4334556788765 56899999
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecC---CcccccccccccccCcceEEeCCCCc-cccCCHHHHHHHHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGKNCNLPLQFLMQTISTVRLDSSFL-HYLRMKMCMRFLSQ 839 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~---~~nDe~M~f~~~~~~~~~v~V~~~~~-~~l~~~~~~~~~l~ 839 (856)
|+|++|..++++|.+. ..+.+++|||. +.||-+. |.. +... |.+.+|.|..+.|+
T Consensus 158 p~GwDKty~Lr~l~~~---------~~~~I~FfGDkt~pGGNDyei-~~~-----------~rt~g~~V~~p~DT~~~l~ 216 (220)
T PF03332_consen 158 PKGWDKTYCLRHLEDE---------GFDEIHFFGDKTFPGGNDYEI-FED-----------PRTIGHTVTSPEDTIKQLK 216 (220)
T ss_dssp ETT-SGGGGGGGTTTT---------T-SEEEEEESS-STTSTTHHH-HHS-----------TTSEEEE-SSHHHHHHHHH
T ss_pred cCCccHHHHHHHHHhc---------ccceEEEEehhccCCCCCcee-eec-----------CCccEEEeCCHHHHHHHHH
Confidence 9999999999987543 26899999991 2456555 432 2222 56689999999999
Q ss_pred HHHH
Q 003029 840 NYLM 843 (856)
Q Consensus 840 ~~~~ 843 (856)
++++
T Consensus 217 ~l~~ 220 (220)
T PF03332_consen 217 ELFF 220 (220)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 9874
|
4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.59 E-value=7.9e-08 Score=90.89 Aligned_cols=63 Identities=19% Similarity=0.291 Sum_probs=48.9
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
+++||+||||++...... ......+.+.+.+.|++|++ .|+.++|+||+....+..++...++
T Consensus 1 ~~vfD~D~tl~~~~~~~~------~~~~~~~~~~~~~~l~~l~~-~g~~i~ivS~~~~~~~~~~~~~~~~ 63 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIA------EIEELELYPGVKEALKELKE-KGIKLALATNKSRREVLELLEELGL 63 (139)
T ss_pred CeEEccCCceEccCcccc------ccccCCcCcCHHHHHHHHHH-CCCeEEEEeCchHHHHHHHHHHcCC
Confidence 489999999998742100 00123678899999999997 5899999999999999998877643
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.3e-05 Score=91.39 Aligned_cols=135 Identities=16% Similarity=0.115 Sum_probs=84.6
Q ss_pred CCceEEE--eecccc-cCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCc
Q 003029 362 GRKVMLG--VDRLDM-IKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 438 (856)
Q Consensus 362 ~~~iIl~--V~Rld~-~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~ 438 (856)
++++|+. .+|..+ .|+++.+++|++.+.+.+|+++ +++.+.+. ... ..++++....+ . +
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~~----~~~~~~~~~~~----~-~- 251 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KRR----LQFEQIKAEYG----P-D- 251 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hhH----HHHHHHHHHhC----C-C-
Confidence 5565543 359988 7999999999999988888754 54433221 111 12222222221 1 1
Q ss_pred ccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeC-----------------CCCchhh
Q 003029 439 VPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-----------------FAGAAQS 501 (856)
Q Consensus 439 ~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe-----------------~aG~~~~ 501 (856)
..|.++.+ +...+|++||++|.+| |.+.+|+|+|+ .|+|++- +.+.+..
T Consensus 252 ~~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G----~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~ni 317 (385)
T TIGR00215 252 LQLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIK----TPMVVGYRMKPLTFLIARRLVKTDYISLPNI 317 (385)
T ss_pred CcEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcC----CCEEEEEcCCHHHHHHHHHHHcCCeeeccHH
Confidence 13544433 3457999999999999 77888999995 7877772 2222222
Q ss_pred c-cCCeE--EE-CCCCHHHHHHHHHHHHcCC
Q 003029 502 L-GAGAI--LV-NPWNITEVANAIARALNMS 528 (856)
Q Consensus 502 l-g~~g~--lV-nP~d~~~lA~ai~~aL~~~ 528 (856)
+ +.+++ ++ .-.+++.+++++.++|+++
T Consensus 318 l~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 318 LANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred hcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 3 22211 11 3357889999999999876
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=98.53 E-value=4.8e-07 Score=81.13 Aligned_cols=88 Identities=28% Similarity=0.341 Sum_probs=74.1
Q ss_pred EEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 003029 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (856)
Q Consensus 462 v~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~ 539 (856)
|++.|+..+|+++..+|+|||| +|+|.+...+....+ |..++.++ |+++++++|..+|+.| +++++..+++
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G----~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~-~~~~~ia~~a 73 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACG----TPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENP-EERRRIAKNA 73 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCC----CeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCH-HHHHHHHHHH
Confidence 4677888999999999999994 677777777888877 55688887 9999999999999965 5888889999
Q ss_pred HHHHH-hcCHHHHHHHHH
Q 003029 540 FTHVT-THTAQEWAETFV 556 (856)
Q Consensus 540 ~~~v~-~~~~~~W~~~fl 556 (856)
+++|. .|++.+-++.||
T Consensus 74 ~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 74 RERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHHhCCHHHHHHHHH
Confidence 99986 888888777776
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=98.38 E-value=5.3e-05 Score=87.28 Aligned_cols=136 Identities=11% Similarity=0.125 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 003029 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (856)
Q Consensus 379 ~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~ 458 (856)
...|+|++.+.+..|++. |=+ |.++ + +...+.++ .+ | ..++.+.+. ....+..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~t--e------~s~kL~~L-~~----y-----~nvvly~~~-~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALT--E------MSSKLMSL-DK----Y-----DNVKLYPNI-TTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecC--c------ccHHHHHH-Hh----c-----CCcEEECCc-ChHHHHHHHH
Confidence 899999999999999965 543 5443 1 11334444 22 2 235654554 4567999999
Q ss_pred HccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCC-CCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHH
Q 003029 459 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-AGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (856)
Q Consensus 459 ~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~-aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~ 537 (856)
.||++|.+|..||+++++.||+..+ .|+|.=+. .|-.+.+ ..|.+|++.|+++++++|.++|+++. ...++..
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~G----~pI~afd~t~~~~~~i-~~g~l~~~~~~~~m~~~i~~lL~d~~-~~~~~~~ 420 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEYN----LLILGFEETAHNRDFI-ASENIFEHNEVDQLISKLKDLLNDPN-QFRELLE 420 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHcC----CcEEEEecccCCcccc-cCCceecCCCHHHHHHHHHHHhcCHH-HHHHHHH
Confidence 9999999999999999999999972 45554444 4555555 45899999999999999999999774 3333333
Q ss_pred HHHHHHH
Q 003029 538 HNFTHVT 544 (856)
Q Consensus 538 ~~~~~v~ 544 (856)
.-+++..
T Consensus 421 ~q~~~a~ 427 (438)
T TIGR02919 421 QQREHAN 427 (438)
T ss_pred HHHHHhc
Confidence 3344443
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.7e-06 Score=85.64 Aligned_cols=66 Identities=18% Similarity=0.111 Sum_probs=52.4
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-------CccccCCHHH---HHHH
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS-------FLHYLRMKMC---MRFL 837 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~-------~~~~l~~~~~---~~~~ 837 (856)
+|..++.+++++++ .+++.++++|| +.||.+| ++.+ ++++.|.+. +.|.+..+.. +.++
T Consensus 76 ~k~~~~~~~~~~~~------~~~~~~~~vGD-s~~D~~~-~~~a---g~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~ 144 (154)
T TIGR01670 76 NKLIAFSDILEKLA------LAPENVAYIGD-DLIDWPV-MEKV---GLSVAVADAHPLLIPRADYVTRIAGGRGAVREV 144 (154)
T ss_pred chHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHH-HHHC---CCeEecCCcCHHHHHhCCEEecCCCCCcHHHHH
Confidence 48899999999998 56899999999 9999999 6655 567888654 3377776654 8888
Q ss_pred HHHHHHH
Q 003029 838 SQNYLMM 844 (856)
Q Consensus 838 l~~~~~~ 844 (856)
++.++..
T Consensus 145 ~~~~~~~ 151 (154)
T TIGR01670 145 CELLLLA 151 (154)
T ss_pred HHHHHHh
Confidence 8888754
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.30 E-value=1e-06 Score=87.51 Aligned_cols=77 Identities=13% Similarity=0.087 Sum_probs=56.1
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHH---HHhcc-------cC-
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD---KNFQE-------YN- 661 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~---~~~~~-------l~- 661 (856)
++++|+||||++.... ++..+-+ ....+++.+.+++++|.+ +|+.|+++|||+..... +|+.. ++
T Consensus 1 iVisDIDGTL~~sd~~-~~~~~~~--~~~~~~~~~~~a~~~l~~-~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~ 76 (157)
T smart00775 1 IVISDIDGTITKSDVL-GHVVPII--GKDWTHPGVAKLYRDIQN-NGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH 76 (157)
T ss_pred CEEEecCCCCcccccc-ccccccc--ccCcCCHHHHHHHHHHHH-cCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC
Confidence 4899999999987310 0000000 014678999999999986 79999999999998874 67766 22
Q ss_pred ceEEeeCceEEE
Q 003029 662 LWLAAENGMFLR 673 (856)
Q Consensus 662 lgliaenG~~i~ 673 (856)
.++++.||+++.
T Consensus 77 g~li~~~g~~~~ 88 (157)
T smart00775 77 GPVLLSPDRLFA 88 (157)
T ss_pred ceEEEcCCcchh
Confidence 378999999885
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.25 E-value=2.9e-06 Score=86.47 Aligned_cols=43 Identities=19% Similarity=0.155 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS 822 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~ 822 (856)
|..++++++++++ .+++++++||| +.||.+| ++.+ ++++.|++
T Consensus 97 k~~~l~~~~~~~g------l~~~ev~~VGD-s~~D~~~-a~~a---G~~~~v~~ 139 (183)
T PRK09484 97 KLIAFSDLLEKLA------IAPEQVAYIGD-DLIDWPV-MEKV---GLSVAVAD 139 (183)
T ss_pred HHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHH-HHHC---CCeEecCC
Confidence 6688999999998 56899999999 9999999 7665 45666654
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.23 E-value=0.00098 Score=74.71 Aligned_cols=309 Identities=18% Similarity=0.210 Sum_probs=177.1
Q ss_pred HHHHHHHHHHHHHhcCCCCEEEEeCccc----hhHH--HHHHhcCCCCeEEEEEecCCC---------chhhhhcCccc-
Q 003029 215 IKANQMFADVVNKHYKDGDVVWCHDYHL----MFLP--KCLKEYNSDMKVGWFLHTPFP---------SSEIHRTLPSR- 278 (856)
Q Consensus 215 ~~vN~~fa~~i~~~~~~~DvIwvHDyhl----~llp--~~lr~~~~~~~i~~flH~PfP---------~~e~fr~lp~~- 278 (856)
++.+.+|+-.-.....++-.||+|--.. ...| .-++++.|+.+|..+.-||-- +.-....+|..
T Consensus 32 ~r~~eRfg~~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D~ 111 (419)
T COG1519 32 KRLGERFGFYKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLDL 111 (419)
T ss_pred HHHHHHhcccCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcCc
Confidence 3456777621122223567999997552 2333 448899999999988766632 11122334432
Q ss_pred HHHHHHh---hcCCEEEEeCHHHHHHHHHHHHHHhCccc-------CC--------------------Cce---------
Q 003029 279 SDLLRAV---LAADLVGFHTYDYARHFVSACTRILGFEG-------TP--------------------EGV--------- 319 (856)
Q Consensus 279 ~~il~~l---l~aDlIgf~t~~~~~~Fl~~~~~~lg~~~-------~~--------------------~~v--------- 319 (856)
...++.. ...|+..|...+.=.|++..|.+. |... +. +.+
T Consensus 112 ~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li~aQse~D~~ 190 (419)
T COG1519 112 PIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIPLVLVNARLSDRSFARYAKLKFLARLLFKNIDLILAQSEEDAQ 190 (419)
T ss_pred hHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCCEEEEeeeechhhhHHHHHHHHHHHHHHHhcceeeecCHHHHH
Confidence 1222222 245666666666666666665432 1110 00 000
Q ss_pred ---eeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcC-CceEEEeecccccCChHHHHHHHHHHHHhCcCc
Q 003029 320 ---EDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDW 395 (856)
Q Consensus 320 ---~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~ 395 (856)
..+.+. |.+.-| |- ... ...+........+|.++++ +++++..+. ...--...+.|+..+++++|+.
T Consensus 191 Rf~~LGa~~--v~v~GN-lK--fd~--~~~~~~~~~~~~~r~~l~~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~ 261 (419)
T COG1519 191 RFRSLGAKP--VVVTGN-LK--FDI--EPPPQLAAELAALRRQLGGHRPVWVAAST--HEGEEEIILDAHQALKKQFPNL 261 (419)
T ss_pred HHHhcCCcc--eEEecc-ee--ecC--CCChhhHHHHHHHHHhcCCCCceEEEecC--CCchHHHHHHHHHHHHhhCCCc
Confidence 011111 222211 10 000 0123344556678888877 899999888 3333444789999999999985
Q ss_pred cCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC-------cccEEEeCCCCCHHHHHHHHHHccEEEECC-
Q 003029 396 RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT-------AVPIHHLDRSLDFPALCALYAVTDVALVTS- 467 (856)
Q Consensus 396 ~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~-------~~pV~~~~g~v~~~el~aly~~ADv~v~~S- 467 (856)
. ||+| | ..||. -..+++++.+.|-+++.-+ -++|.. . -+.-|+..+|+.|||+.+--
T Consensus 262 l----lIlV--P---RHpER---f~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l-~--DtmGEL~l~y~~adiAFVGGS 326 (419)
T COG1519 262 L----LILV--P---RHPER---FKAVENLLKRKGLSVTRRSQGDPPFSDTDVLL-G--DTMGELGLLYGIADIAFVGGS 326 (419)
T ss_pred e----EEEe--c---CChhh---HHHHHHHHHHcCCeEEeecCCCCCCCCCcEEE-E--ecHhHHHHHHhhccEEEECCc
Confidence 3 4333 4 23442 3567777777766654311 123432 1 25679999999999988743
Q ss_pred C--CcCCChhHHHHHhhcCCCCceEEEe----CCCCchhhc-c-CCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 003029 468 L--RDGMNLVSYEFVACQDLKKGVLILS----EFAGAAQSL-G-AGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (856)
Q Consensus 468 ~--~EG~~Lv~lEama~~~~~~g~lVlS----e~aG~~~~l-g-~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~ 539 (856)
+ .-|.| ++|+.+|+ .|+|.. .|.-+++.+ . .+|+.|+ |.+.++.++..++++ +++|.++.++.
T Consensus 327 lv~~GGHN--~LEpa~~~----~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~--~~~~l~~~v~~l~~~-~~~r~~~~~~~ 397 (419)
T COG1519 327 LVPIGGHN--PLEPAAFG----TPVIFGPYTFNFSDIAERLLQAGAGLQVE--DADLLAKAVELLLAD-EDKREAYGRAG 397 (419)
T ss_pred ccCCCCCC--hhhHHHcC----CCEEeCCccccHHHHHHHHHhcCCeEEEC--CHHHHHHHHHHhcCC-HHHHHHHHHHH
Confidence 3 45666 58999993 677754 444455544 2 3466665 477888888887776 67888888888
Q ss_pred HHHHHhcCHHHHHHHHHHHH
Q 003029 540 FTHVTTHTAQEWAETFVSEL 559 (856)
Q Consensus 540 ~~~v~~~~~~~W~~~fl~~l 559 (856)
...+..+. .-.++.+..|
T Consensus 398 ~~~v~~~~--gal~r~l~~l 415 (419)
T COG1519 398 LEFLAQNR--GALARTLEAL 415 (419)
T ss_pred HHHHHHhh--HHHHHHHHHh
Confidence 88887662 3334444444
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=98.00 E-value=1.1e-05 Score=76.74 Aligned_cols=54 Identities=13% Similarity=0.112 Sum_probs=42.0
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHH
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD 654 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~ 654 (856)
|+|++|+||||+.....+- ....+.++++++|++|.+ .|+.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y--------~~~~~~~~~ie~L~~l~~-~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDY--------ANVAPILAVIEKLRHYKA-LGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcc--------cccccCHHHHHHHHHHHH-CCCEEEEECCCCchhhh
Confidence 6899999999987531110 124578899999999975 69999999999987653
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.87 E-value=2.6e-05 Score=83.74 Aligned_cols=72 Identities=15% Similarity=0.269 Sum_probs=58.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCC-ChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc----eE
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKL-HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL----WL 664 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~-s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l----gl 664 (856)
..++|+||+||||+++.. ..++ +|.+.++|.+|.+ .|+.++|+|++++..+...++.+++ ..
T Consensus 125 ~~kvIvFDLDgTLi~~~~------------~v~irdPgV~EaL~~Lke-kGikLaIaTS~~Re~v~~~L~~lGLd~YFdv 191 (301)
T TIGR01684 125 PPHVVVFDLDSTLITDEE------------PVRIRDPRIYDSLTELKK-RGCILVLWSYGDRDHVVESMRKVKLDRYFDI 191 (301)
T ss_pred cceEEEEecCCCCcCCCC------------ccccCCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHcCCCcccCE
Confidence 468999999999999832 1223 4899999999997 7999999999999999988888864 36
Q ss_pred EeeCceEEEe
Q 003029 665 AAENGMFLRC 674 (856)
Q Consensus 665 iaenG~~i~~ 674 (856)
|..+|...+.
T Consensus 192 IIs~Gdv~~~ 201 (301)
T TIGR01684 192 IISGGHKAEE 201 (301)
T ss_pred EEECCccccC
Confidence 7778887663
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=8.5e-06 Score=90.20 Aligned_cols=45 Identities=11% Similarity=0.152 Sum_probs=38.8
Q ss_pred CCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeC
Q 003029 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLD 821 (856)
Q Consensus 766 gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~ 821 (856)
+-.|+.+++++++++| ++++++++||| +.||++| ++.+ +++|.+.
T Consensus 246 ~k~K~~~L~~la~~lg------i~~~qtIaVGD-g~NDl~m-~~~A---GlgiA~n 290 (322)
T PRK11133 246 AQYKADTLTRLAQEYE------IPLAQTVAIGD-GANDLPM-IKAA---GLGIAYH 290 (322)
T ss_pred cccHHHHHHHHHHHcC------CChhhEEEEEC-CHHHHHH-HHHC---CCeEEeC
Confidence 3589999999999999 67899999999 9999999 7766 5677774
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00021 Score=74.62 Aligned_cols=51 Identities=14% Similarity=0.187 Sum_probs=42.4
Q ss_pred EEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC
Q 003029 762 VRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 762 V~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
..-.+-+|..+++.+++.+| ++++.++|+|| +.||.+| |+.+ +..|.|.+.
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g------~~~~~~~a~gD-s~nDlpm-l~~a---g~~ia~n~~ 188 (212)
T COG0560 138 PICDGEGKAKALRELAAELG------IPLEETVAYGD-SANDLPM-LEAA---GLPIAVNPK 188 (212)
T ss_pred eecCcchHHHHHHHHHHHcC------CCHHHeEEEcC-chhhHHH-HHhC---CCCeEeCcC
Confidence 33445689999999999999 66889999999 9999999 8877 567777665
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00024 Score=71.40 Aligned_cols=141 Identities=11% Similarity=0.090 Sum_probs=92.5
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeCc
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENG 669 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaenG 669 (856)
..|+++||+||||++..-. -++.-+.....+.+-...|+.|.+ .|..++|+|+.+...+...++.+++.
T Consensus 6 ~i~~~v~d~dGv~tdg~~~----~~~~g~~~~~~~~~D~~~~~~L~~-~Gi~laIiT~k~~~~~~~~l~~lgi~------ 74 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIV----INDEGIESRNFDIKDGMGVIVLQL-CGIDVAIITSKKSGAVRHRAEELKIK------ 74 (169)
T ss_pred cCeEEEEeCceeeECCeEE----EcCCCcEEEEEecchHHHHHHHHH-CCCEEEEEECCCcHHHHHHHHHCCCc------
Confidence 3799999999999986210 011111233455566777888875 68889999988777766666554321
Q ss_pred eEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCC
Q 003029 670 MFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNA 749 (856)
Q Consensus 670 ~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~ 749 (856)
.| +
T Consensus 75 --------~~---f------------------------------------------------------------------ 77 (169)
T TIGR02726 75 --------RF---H------------------------------------------------------------------ 77 (169)
T ss_pred --------EE---E------------------------------------------------------------------
Confidence 00 0
Q ss_pred CeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC-----
Q 003029 750 SVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF----- 824 (856)
Q Consensus 750 ~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~----- 824 (856)
.+ + -.|-..+..++++++ +.++++++||| +.||++| ++. .++++.+.+..
T Consensus 78 -----~~-----~----kpkp~~~~~~~~~l~------~~~~ev~~iGD-~~nDi~~-~~~---ag~~~am~nA~~~lk~ 132 (169)
T TIGR02726 78 -----EG-----I----KKKTEPYAQMLEEMN------ISDAEVCYVGD-DLVDLSM-MKR---VGLAVAVGDAVADVKE 132 (169)
T ss_pred -----ec-----C----CCCHHHHHHHHHHcC------cCHHHEEEECC-CHHHHHH-HHH---CCCeEECcCchHHHHH
Confidence 00 0 145567888888888 56889999999 9999999 665 47888888752
Q ss_pred -c-cccC---CHHHHHHHHHHHHH
Q 003029 825 -L-HYLR---MKMCMRFLSQNYLM 843 (856)
Q Consensus 825 -~-~~l~---~~~~~~~~l~~~~~ 843 (856)
+ |-+. ..-.++++.+.+|+
T Consensus 133 ~A~~I~~~~~~~g~v~e~~e~il~ 156 (169)
T TIGR02726 133 AAAYVTTARGGHGAVREVAELILK 156 (169)
T ss_pred hCCEEcCCCCCCCHHHHHHHHHHH
Confidence 2 3332 22357788877775
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00019 Score=77.30 Aligned_cols=71 Identities=15% Similarity=0.234 Sum_probs=55.5
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCC-ChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc----eE
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKL-HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL----WL 664 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~-s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l----gl 664 (856)
..++|+||+||||+++.. ..++ +|.+.++|.+|.+ .|..++|+|+.+...+...++.+++ -.
T Consensus 127 ~~~~i~~D~D~TL~~~~~------------~v~irdp~V~EtL~eLke-kGikLaIvTNg~Re~v~~~Le~lgL~~yFDv 193 (303)
T PHA03398 127 IPHVIVFDLDSTLITDEE------------PVRIRDPFVYDSLDELKE-RGCVLVLWSYGNREHVVHSLKETKLEGYFDI 193 (303)
T ss_pred eccEEEEecCCCccCCCC------------ccccCChhHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHcCCCccccE
Confidence 358999999999998832 1112 5899999999996 7999999998888888888888754 25
Q ss_pred EeeCceEEE
Q 003029 665 AAENGMFLR 673 (856)
Q Consensus 665 iaenG~~i~ 673 (856)
|..+|....
T Consensus 194 II~~g~i~~ 202 (303)
T PHA03398 194 IICGGRKAG 202 (303)
T ss_pred EEECCCccc
Confidence 666776554
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0018 Score=67.58 Aligned_cols=45 Identities=9% Similarity=0.149 Sum_probs=36.7
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
.|+..+++++++++ +++++++++|| +.+|.++ .+.+ ++.|.++.+
T Consensus 152 ~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~Di~a-a~~a---g~~i~~~~~ 196 (219)
T TIGR00338 152 YKGKTLLILLRKEG------ISPENTVAVGD-GANDLSM-IKAA---GLGIAFNAK 196 (219)
T ss_pred ccHHHHHHHHHHcC------CCHHHEEEEEC-CHHHHHH-HHhC---CCeEEeCCC
Confidence 48999999999988 56889999999 9999888 5544 666777654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0023 Score=65.39 Aligned_cols=46 Identities=15% Similarity=0.309 Sum_probs=37.9
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF 824 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~ 824 (856)
+|+.++++++++++ .+++.++++|| +.+|.+| .+.+ +..+.+.+..
T Consensus 147 ~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~D~~~-a~~a---g~~~a~~~~~ 192 (201)
T TIGR01491 147 NKGEAVERLKRELN------PSLTETVAVGD-SKNDLPM-FEVA---DISISLGDEG 192 (201)
T ss_pred cHHHHHHHHHHHhC------CCHHHEEEEcC-CHhHHHH-HHhc---CCeEEECCCc
Confidence 69999999999988 56889999999 9999999 6654 6777776543
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0042 Score=64.97 Aligned_cols=62 Identities=8% Similarity=-0.104 Sum_probs=40.8
Q ss_pred CCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC----C-----CccccCCHHHHH
Q 003029 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS----S-----FLHYLRMKMCMR 835 (856)
Q Consensus 765 ~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~----~-----~~~~l~~~~~~~ 835 (856)
.+-.|..++.+++++++ .+.+++||| +.+|..| -+... ..+.+..+. + +.|-+.++.++.
T Consensus 152 ~~~~K~~~i~~~~~~~~--------~~~~i~iGD-s~~Di~a-a~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~ 220 (224)
T PLN02954 152 RSGGKAEAVQHIKKKHG--------YKTMVMIGD-GATDLEA-RKPGG-ADLFIGYGGVQVREAVAAKADWFVTDFQDLI 220 (224)
T ss_pred CCccHHHHHHHHHHHcC--------CCceEEEeC-CHHHHHh-hhcCC-CCEEEecCCCccCHHHHhcCCEEECCHHHHH
Confidence 34568999999998876 357999999 9999988 55432 222332331 1 126677777765
Q ss_pred HH
Q 003029 836 FL 837 (856)
Q Consensus 836 ~~ 837 (856)
.+
T Consensus 221 ~~ 222 (224)
T PLN02954 221 EV 222 (224)
T ss_pred Hh
Confidence 54
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.00053 Score=73.45 Aligned_cols=66 Identities=5% Similarity=0.145 Sum_probs=52.3
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC---CCHhhHHHHhcccCc-----
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQEYNL----- 662 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~l~l----- 662 (856)
.|+|+||+||||++.. ..+ +.+.++|++|.+ .|+.|+++|| |+...+...+..+++
T Consensus 1 ~~~~~~D~DGtl~~~~--------------~~i-~~a~~~l~~l~~-~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~ 64 (249)
T TIGR01457 1 YKGYLIDLDGTMYKGK--------------ERI-PEAETFVHELQK-RDIPYLFVTNNSTRTPESVAEMLASFDIPATLE 64 (249)
T ss_pred CCEEEEeCCCceEcCC--------------eeC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChh
Confidence 3789999999999862 223 478999999996 7999999995 999999888888743
Q ss_pred eEEeeCceEE
Q 003029 663 WLAAENGMFL 672 (856)
Q Consensus 663 gliaenG~~i 672 (856)
.+++.+|+..
T Consensus 65 ~iit~~~~~~ 74 (249)
T TIGR01457 65 TVFTASMATA 74 (249)
T ss_pred hEeeHHHHHH
Confidence 3777777643
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.00085 Score=64.22 Aligned_cols=64 Identities=22% Similarity=0.357 Sum_probs=48.0
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC--------HhhHHHHhcccCc
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD--------RNVLDKNFQEYNL 662 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~--------~~~l~~~~~~l~l 662 (856)
|+++||+||||++.... .+ +.....+.+.+.++|+.|.+ .|+.++|+|+++ ...+...+..+++
T Consensus 1 k~~~~D~dgtL~~~~~~----~~--~~~~~~~~~~v~~~l~~L~~-~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPY----VD--DEDERILYPEVPDALAELKE-AGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred CEEEEeCCCceecCCCC----CC--CHHHheeCCCHHHHHHHHHH-CCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 68999999999953110 00 11245678899999999985 699999999998 6777777777654
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0009 Score=72.02 Aligned_cols=55 Identities=7% Similarity=0.111 Sum_probs=42.0
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhc
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 658 (856)
|+|+||+||||...... ...+.|.+.++|++|.+ .|..|+++|||+....+....
T Consensus 2 k~i~~D~DGtl~~~~~~-----------~~~~~~~a~~al~~l~~-~G~~~~~~Tn~~~~~~~~~~~ 56 (257)
T TIGR01458 2 KGVLLDISGVLYISDAK-----------SGVAVPGSQEAVKRLRG-ASVKVRFVTNTTKESKQDLLE 56 (257)
T ss_pred CEEEEeCCCeEEeCCCc-----------ccCcCCCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHH
Confidence 78999999999976210 11267799999999986 699999999987776443333
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.00095 Score=71.45 Aligned_cols=54 Identities=11% Similarity=0.114 Sum_probs=45.9
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
+|+|+||+||||.... .+.|.+.++|+.|.+ .|..++++|+|+......+...+
T Consensus 1 ~~~v~~DlDGtL~~~~---------------~~~p~a~~~l~~L~~-~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 1 IKNVICDIDGVLMHDN---------------VAVPGAAEFLHRILD-KGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CcEEEEeCCCceEeCC---------------eeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHH
Confidence 4789999999999762 467889999999996 79999999999998777766665
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.12 Score=56.52 Aligned_cols=165 Identities=15% Similarity=0.200 Sum_probs=112.1
Q ss_pred CCceEEEeecccccCChHHHHHHHHHHHHh-------CcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccC
Q 003029 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEE-------NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFG 434 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~-------~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g 434 (856)
...++++--.+.|-..+--+|.|+..+-+. +|. + |.+|+ |.||..+.+.++|++.
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~----l-lciIT----GKGPlkE~Y~~~I~~~--------- 315 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPS----L-LCIIT----GKGPLKEKYSQEIHEK--------- 315 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCc----E-EEEEc----CCCchhHHHHHHHHHh---------
Confidence 346788888999999999999999865221 332 3 33344 2456666666666654
Q ss_pred CCCcccEEEeCCCCCHHHHHHHHHHccEEE--ECCCCcCCCh--hHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEE
Q 003029 435 TLTAVPIHHLDRSLDFPALCALYAVTDVAL--VTSLRDGMNL--VSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAIL 508 (856)
Q Consensus 435 ~~~~~pV~~~~g~v~~~el~aly~~ADv~v--~~S~~EG~~L--v~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~l 508 (856)
.|..|.+.+-.+.-++++.++..||..| -||. -|.-| -+....-| +.|+++-.|.-..|.+ |.||++
T Consensus 316 --~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGc----glPvcA~~fkcl~ELVkh~eNGlv 388 (444)
T KOG2941|consen 316 --NLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGC----GLPVCAVNFKCLDELVKHGENGLV 388 (444)
T ss_pred --cccceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcC----CCceeeecchhHHHHHhcCCCceE
Confidence 4567888888899999999999999765 4554 45544 45566667 3677777887777766 789999
Q ss_pred ECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 003029 509 VNPWNITEVANAIARALNM---SPEEREKRHWHNFTHVTTHTAQEWAETFVS 557 (856)
Q Consensus 509 VnP~d~~~lA~ai~~aL~~---~~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 557 (856)
++ |.+++|+.|..+.+. +..+-....+..++ ..-.+|.+..-.
T Consensus 389 F~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e----~~e~RW~~~W~~ 434 (444)
T KOG2941|consen 389 FE--DSEELAEQLQMLFKNFPDNADELNQLKKNLRE----EQELRWDESWER 434 (444)
T ss_pred ec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHH----HHhhhHHHHHHH
Confidence 96 899999999999982 23333332223233 334567665543
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0024 Score=61.20 Aligned_cols=65 Identities=14% Similarity=0.095 Sum_probs=43.8
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCC-CHhhHHHHhcc
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS-DRNVLDKNFQE 659 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR-~~~~l~~~~~~ 659 (856)
|+|++|+||||++.....- ....+ .....+.+.+.+.|+.|.+ .|+.++|+|++ +.......++.
T Consensus 1 kli~~DlD~Tl~~~~~~~~-~~~~~-~~~~~~~~gv~e~L~~Lk~-~g~~l~i~Sn~~~~~~~~~~l~~ 66 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVV-GEDPI-IDLEVTIKEIRDKLQTLKK-NGFLLALASYNDDPHVAYELLKI 66 (128)
T ss_pred CEEEEeCCCCCCCCCcccc-cCCcc-hhhHHHHHHHHHHHHHHHH-CCeEEEEEeCCCCHHHHHHHHHh
Confidence 6899999999998731000 00000 0000357899999999986 69999999999 77666655544
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0014 Score=72.47 Aligned_cols=55 Identities=11% Similarity=0.162 Sum_probs=44.0
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
++++|+||+||||.... .+-+.+.++|++|.+ .|.+|+++|+|+......++..+
T Consensus 27 ~~~~~~~D~DGtl~~~~---------------~~~~ga~e~l~~lr~-~g~~~~~~TN~~~~~~~~~~~~l 81 (311)
T PLN02645 27 SVETFIFDCDGVIWKGD---------------KLIEGVPETLDMLRS-MGKKLVFVTNNSTKSRAQYGKKF 81 (311)
T ss_pred hCCEEEEeCcCCeEeCC---------------ccCcCHHHHHHHHHH-CCCEEEEEeCCCCCCHHHHHHHH
Confidence 47899999999999762 245778999999986 69999999999966655555443
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.002 Score=70.19 Aligned_cols=52 Identities=10% Similarity=0.121 Sum_probs=39.9
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhc
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 658 (856)
+++|+||+||||.+.. .+-+.+.++|++|.+ +|..|+++|||+......++.
T Consensus 2 ~~~~~~D~DGtl~~~~---------------~~~~ga~e~l~~L~~-~g~~~~~~Tnns~~~~~~~~~ 53 (279)
T TIGR01452 2 AQGFIFDCDGVLWLGE---------------RVVPGAPELLDRLAR-AGKAALFVTNNSTKSRAEYAL 53 (279)
T ss_pred ccEEEEeCCCceEcCC---------------eeCcCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHH
Confidence 5789999999998752 234559999999986 799999999987554444333
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0063 Score=64.54 Aligned_cols=84 Identities=10% Similarity=0.041 Sum_probs=54.8
Q ss_pred cchHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccc--c-------------------ccccCCChhHHHHHHHhh
Q 003029 577 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQI--R-------------------EMELKLHPDLKQPLNALC 635 (856)
Q Consensus 577 l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~--~-------------------~~~~~~s~~~~~~L~~L~ 635 (856)
.+++++.++....+.-.|+||+||||+++.+.- ..+.+. + .....+-+-+++.|+.|.
T Consensus 49 ~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~-~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~ 127 (237)
T TIGR01672 49 ISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGF-WRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQ 127 (237)
T ss_pred EEHHHHHHhcCCCCCeEEEEeCCCccccCcHHH-hCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHH
Confidence 366777777776555589999999999885410 001010 0 011233334899999998
Q ss_pred cCCCCeEEEEcCC----CHhhHHHHhcccCc
Q 003029 636 HDPKTTIVVLSGS----DRNVLDKNFQEYNL 662 (856)
Q Consensus 636 ~d~g~~V~I~SGR----~~~~l~~~~~~l~l 662 (856)
+ .|.+++|+|+| ....++.+++.+++
T Consensus 128 ~-~G~~i~iVTnr~~~k~~~~a~~ll~~lGi 157 (237)
T TIGR01672 128 R-RGDAIFFVTGRTPGKTDTVSKTLAKNFHI 157 (237)
T ss_pred H-CCCEEEEEeCCCCCcCHHHHHHHHHHhCC
Confidence 6 79999999999 44566666655543
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.012 Score=64.07 Aligned_cols=65 Identities=11% Similarity=0.021 Sum_probs=47.9
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-----------CccccCCHHHHHH
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS-----------FLHYLRMKMCMRF 836 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~-----------~~~~l~~~~~~~~ 836 (856)
.|..++.+++++++ .+++++++||| +.+|+.+ -+.++- .+|.|... +.|.+.++.++..
T Consensus 196 ~k~~~~~~~l~~~~------~~p~~~l~IGD-s~~Di~a-A~~AG~--~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~ 265 (273)
T PRK13225 196 SKRRALSQLVAREG------WQPAAVMYVGD-ETRDVEA-ARQVGL--IAVAVTWGFNDRQSLVAACPDWLLETPSDLLQ 265 (273)
T ss_pred CCHHHHHHHHHHhC------cChhHEEEECC-CHHHHHH-HHHCCC--eEEEEecCCCCHHHHHHCCCCEEECCHHHHHH
Confidence 46788999999988 56789999999 9998777 443322 34444221 2389999999999
Q ss_pred HHHHHH
Q 003029 837 LSQNYL 842 (856)
Q Consensus 837 ~l~~~~ 842 (856)
++.+|+
T Consensus 266 ~~~~~~ 271 (273)
T PRK13225 266 AVTQLM 271 (273)
T ss_pred HHHHHh
Confidence 888775
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.0095 Score=59.77 Aligned_cols=57 Identities=14% Similarity=0.128 Sum_probs=38.1
Q ss_pred CCeEEEEecCCccCCCCCC-CCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCH
Q 003029 590 NNRLLILGFNATLTEPVDT-PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~-p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~ 650 (856)
+.|+++||+||||+...+. +- -+.++.-..+-+.+.++|++|.+ .|..++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~---~~~~~~~~~~~pgv~e~L~~Lk~-~G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVF---PTSASDWRFLYPEIPAKLQELDD-EGYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcc---cCChHHeEEecCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 5689999999999975210 00 00000011134789999999986 6999999997654
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.32 Score=54.51 Aligned_cols=152 Identities=15% Similarity=0.138 Sum_probs=85.6
Q ss_pred CCceEEEee-ccc-ccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcc
Q 003029 362 GRKVMLGVD-RLD-MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (856)
Q Consensus 362 ~~~iIl~V~-Rld-~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~ 439 (856)
.+.+.+--| |-. -.+-++-.++|+..+.+++|+++ ++.-.. .+.|+.++.+... .-.. . .
T Consensus 188 ~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~----~vlp~~-----~~~~~~~~~~~~~---~~~~-----~-~ 249 (381)
T COG0763 188 EKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK----FVLPLV-----NAKYRRIIEEALK---WEVA-----G-L 249 (381)
T ss_pred CCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce----EEEecC-----cHHHHHHHHHHhh---cccc-----C-c
Confidence 344444444 433 34456777889999988999976 432222 1333333332211 1000 0 0
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC-----------------chhhc
Q 003029 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG-----------------AAQSL 502 (856)
Q Consensus 440 pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG-----------------~~~~l 502 (856)
.++ +...+....+.+||+.+..| |.+.+|++.|+ .|.|++=-.. ....+
T Consensus 250 ~~~-----~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g----~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi 315 (381)
T COG0763 250 SLI-----LIDGEKRKAFAAADAALAAS-----GTATLEAALAG----TPMVVAYKVKPITYFIAKRLVKLPYVSLPNIL 315 (381)
T ss_pred eEE-----ecCchHHHHHHHhhHHHHhc-----cHHHHHHHHhC----CCEEEEEeccHHHHHHHHHhccCCcccchHHh
Confidence 122 24467788899999999998 79999999995 6766653222 22222
Q ss_pred cCCeEEECC-----CCHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHHHhc
Q 003029 503 GAGAILVNP-----WNITEVANAIARALNMSP--EEREKRHWHNFTHVTTH 546 (856)
Q Consensus 503 g~~g~lVnP-----~d~~~lA~ai~~aL~~~~--~er~~r~~~~~~~v~~~ 546 (856)
.+-.+|+- ..++.+|+++..++.++. ++..+....+.+.+.+.
T Consensus 316 -~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~ 365 (381)
T COG0763 316 -AGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLRED 365 (381)
T ss_pred -cCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCC
Confidence 11122211 347899999999998762 12233344455555544
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.0097 Score=57.92 Aligned_cols=70 Identities=19% Similarity=0.330 Sum_probs=45.1
Q ss_pred hcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
..++||+++|+||||++-.---+.-+..+ +.-+-.---.|+.|.+ -|++|.|+|||.-..+++..+++++
T Consensus 5 a~~IkLli~DVDGvLTDG~ly~~~~Gee~----KaFnv~DG~Gik~l~~-~Gi~vAIITGr~s~ive~Ra~~LGI 74 (170)
T COG1778 5 AKNIKLLILDVDGVLTDGKLYYDENGEEI----KAFNVRDGHGIKLLLK-SGIKVAIITGRDSPIVEKRAKDLGI 74 (170)
T ss_pred hhhceEEEEeccceeecCeEEEcCCCcee----eeeeccCcHHHHHHHH-cCCeEEEEeCCCCHHHHHHHHHcCC
Confidence 35789999999999998520000001111 1111112234566654 5999999999999999999988765
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.023 Score=55.96 Aligned_cols=65 Identities=17% Similarity=0.188 Sum_probs=56.5
Q ss_pred HhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEE
Q 003029 587 LRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLA 665 (856)
Q Consensus 587 ~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgli 665 (856)
++...|-|++|+|.||++.. ....+|++++-+.++.+ .|+.|+|+|.-...-+..+...+++.+|
T Consensus 24 ~~~Gikgvi~DlDNTLv~wd-------------~~~~tpe~~~W~~e~k~-~gi~v~vvSNn~e~RV~~~~~~l~v~fi 88 (175)
T COG2179 24 KAHGIKGVILDLDNTLVPWD-------------NPDATPELRAWLAELKE-AGIKVVVVSNNKESRVARAAEKLGVPFI 88 (175)
T ss_pred HHcCCcEEEEeccCceeccc-------------CCCCCHHHHHHHHHHHh-cCCEEEEEeCCCHHHHHhhhhhcCCcee
Confidence 44678999999999999984 45688999999999986 7999999999999999989888877665
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.035 Score=59.34 Aligned_cols=93 Identities=23% Similarity=0.344 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHhcCC------CCeEEEEEecC-CC---chhhhh--cCccc-
Q 003029 212 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNS------DMKVGWFLHTP-FP---SSEIHR--TLPSR- 278 (856)
Q Consensus 212 ~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~~~~------~~~i~~flH~P-fP---~~e~fr--~lp~~- 278 (856)
..|.-.++.-++.+...-...||||+||||..++|.++|.... ++++.+++|.. |. +.+.+. .+|+.
T Consensus 114 ~rf~~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~ 193 (245)
T PF08323_consen 114 ERFAFFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEY 193 (245)
T ss_dssp HHHHHHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGG
T ss_pred HHHHHHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHH
Confidence 3443334444444333212579999999999999999998753 69999999974 22 112221 23321
Q ss_pred -------------HHHHHHhhcCCEEEEeCHHHHHHHHH
Q 003029 279 -------------SDLLRAVLAADLVGFHTYDYARHFVS 304 (856)
Q Consensus 279 -------------~~il~~ll~aDlIgf~t~~~~~~Fl~ 304 (856)
.-+-.|+..||.|..-++.|++.-++
T Consensus 194 ~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 194 FQNLDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp S-STTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred hccccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 24556799999999999999876543
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.013 Score=57.36 Aligned_cols=54 Identities=19% Similarity=0.187 Sum_probs=38.9
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCH
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~ 650 (856)
++++||+||||++..... .... ....++-+.+.++|+.|.+ .|..++|+|+.+.
T Consensus 1 ~~~~~d~dgtl~~~~~~~--~~~~--~~~~~~~~g~~~~l~~Lk~-~g~~~~I~Sn~~~ 54 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSD--YPRS--LDDWQLRPGAVPALLTLRA-AGYTVVVVTNQSG 54 (147)
T ss_pred CeEEEeCCCceeccCCcc--cCCC--HHHeEEcCChHHHHHHHHH-CCCEEEEEeCCCc
Confidence 468999999999874211 0011 1123567889999999986 7999999998763
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.031 Score=54.75 Aligned_cols=92 Identities=16% Similarity=0.236 Sum_probs=47.8
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCccc-----HHHHHH-hhcCCEEEEeCHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-----SDLLRA-VLAADLVGFHTYDYARHFVS 304 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~-----~~il~~-ll~aDlIgf~t~~~~~~Fl~ 304 (856)
+.|+|++|.++...+...... +.++.+++|.+++.........+. ..+... ...+|.|..-+....+.+.+
T Consensus 80 ~~DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l~~ 156 (177)
T PF13439_consen 80 KPDIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDELIK 156 (177)
T ss_dssp T-SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHHHH
T ss_pred CCCeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHHHH
Confidence 569999999887765544333 889999999987421111111111 111111 34688888777655554432
Q ss_pred HHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhh
Q 003029 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFI 341 (856)
Q Consensus 305 ~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~ 341 (856)
.|. ...++.++|+|||.+.|+
T Consensus 157 -----~~~-----------~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 157 -----FGI-----------PPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp -----HT-------------SS-EEE----B-CCCH-
T ss_pred -----hCC-----------cccCCEEEECCccHHHcC
Confidence 232 246899999999999884
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.049 Score=59.16 Aligned_cols=65 Identities=9% Similarity=-0.119 Sum_probs=44.3
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC----------Cc-cccCCHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS----------FL-HYLRMKM 832 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~----------~~-~~l~~~~ 832 (856)
+.+-.+..+++.+++++| ++++.+++||| ..+|++| -+.++-. ++.|... .+ |-+.++.
T Consensus 154 ~~~Kp~p~~~~~~~~~~g------~~~~~~l~IGD-~~~Di~a-A~~aGi~--~i~v~~G~~~~~~l~~~~~~~vi~~l~ 223 (272)
T PRK13223 154 PQKKPDPAALLFVMKMAG------VPPSQSLFVGD-SRSDVLA-AKAAGVQ--CVALSYGYNHGRPIAEESPALVIDDLR 223 (272)
T ss_pred CCCCCCcHHHHHHHHHhC------CChhHEEEECC-CHHHHHH-HHHCCCe--EEEEecCCCCchhhhhcCCCEEECCHH
Confidence 334556788999999998 56899999999 9999998 5554322 4444211 12 6777776
Q ss_pred HHHHHH
Q 003029 833 CMRFLS 838 (856)
Q Consensus 833 ~~~~~l 838 (856)
++.+++
T Consensus 224 el~~~~ 229 (272)
T PRK13223 224 ALLPGC 229 (272)
T ss_pred HHHHHH
Confidence 666443
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.5 Score=54.88 Aligned_cols=203 Identities=13% Similarity=0.136 Sum_probs=104.1
Q ss_pred eecccChhhhhhhhcCC-chHHH-HHHHHHHhc---CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEE
Q 003029 331 FPIGIDSERFIRALEIN-PVQVH-IKELQETFA---GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 405 (856)
Q Consensus 331 iP~GID~~~f~~~~~~~-~~~~~-~~~lr~~~~---~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~ 405 (856)
+-||.-.......+.+. ++... +-.-|+.|+ +..++.+..++ .|=-+..++.+.++|+..|+.+ |++..
T Consensus 248 ~~~~~~~~~~~~~~~~g~~~~~~~v~~~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~ 321 (468)
T PF13844_consen 248 VQNGLATTQTNNKAATGEEVPQNIVVTTRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLR 321 (468)
T ss_dssp EEECCGHHHH-HHHHTTSS--SSEEEEETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEE
T ss_pred eecccchhhhhccccCCccCCccccccCHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEee
Confidence 46777666555433221 11100 011234442 44444445554 5667899999999999999854 66665
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCC
Q 003029 406 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDL 485 (856)
Q Consensus 406 ~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~ 485 (856)
.+. ... +.+++.+.+ .|- +-..++| .+..+.++..+.|+.+||+|-|..+-| +.+.+||+.+
T Consensus 322 ~~~--~~~------~~l~~~~~~----~Gv-~~~Ri~f-~~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwm--- 383 (468)
T PF13844_consen 322 FPA--SGE------ARLRRRFAA----HGV-DPDRIIF-SPVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWM--- 383 (468)
T ss_dssp TST--THH------HHHHHHHHH----TTS--GGGEEE-EE---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHH---
T ss_pred CCH--HHH------HHHHHHHHH----cCC-ChhhEEE-cCCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHc---
Confidence 443 111 223333333 232 2234665 667788999999999999999987776 5678999999
Q ss_pred CCceEEEeCCCC-chh-----hc---cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh---cCHHHHHH
Q 003029 486 KKGVLILSEFAG-AAQ-----SL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTT---HTAQEWAE 553 (856)
Q Consensus 486 ~~g~lVlSe~aG-~~~-----~l---g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~---~~~~~W~~ 553 (856)
|++|+|--+- .+. .+ |-.-++ -.|.++..+.-.++-+++ +.++...++.++...+ +|...|+.
T Consensus 384 --GVPvVTl~G~~~~sR~~aSiL~~lGl~ElI--A~s~~eYv~~Av~La~D~-~~l~~lR~~Lr~~~~~SpLfd~~~~ar 458 (468)
T PF13844_consen 384 --GVPVVTLPGETMASRVGASILRALGLPELI--ADSEEEYVEIAVRLATDP-ERLRALRAKLRDRRSKSPLFDPKRFAR 458 (468)
T ss_dssp --T--EEB---SSGGGSHHHHHHHHHT-GGGB---SSHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHSGGG-HHHHHH
T ss_pred --CCCEEeccCCCchhHHHHHHHHHcCCchhc--CCCHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHhhCCCCCHHHHHH
Confidence 5666663221 111 11 322222 246677666656666644 3555555555555432 57788888
Q ss_pred HHHHHHHHh
Q 003029 554 TFVSELNDT 562 (856)
Q Consensus 554 ~fl~~l~~~ 562 (856)
.|-..+.+.
T Consensus 459 ~lE~a~~~m 467 (468)
T PF13844_consen 459 NLEAAYRQM 467 (468)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 777766653
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.045 Score=55.07 Aligned_cols=60 Identities=13% Similarity=0.161 Sum_probs=46.8
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC-HhhHHHHhcccCc
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD-RNVLDKNFQEYNL 662 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~-~~~l~~~~~~l~l 662 (856)
-..+++++|+||||+... ...+.+.+.+.|++|.+ .|..++|+|+.+ ...+..+...+++
T Consensus 23 ~~v~~vv~D~Dgtl~~~~-------------~~~~~pgv~e~L~~Lk~-~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPD-------------HNEAYPALRDWIEELKA-AGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CCCCEEEEecCCccccCC-------------CCCcChhHHHHHHHHHH-cCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 567999999999999763 23577899999999986 689999999998 4555555554443
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.045 Score=58.07 Aligned_cols=72 Identities=10% Similarity=-0.012 Sum_probs=46.7
Q ss_pred cchHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCcc-----c----------------cccccCCChhHHHHHHHhh
Q 003029 577 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQ-----I----------------REMELKLHPDLKQPLNALC 635 (856)
Q Consensus 577 l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~-----~----------------~~~~~~~s~~~~~~L~~L~ 635 (856)
..++++.++-..-+.-.|+||+|||++++.+.... +.+ . ......|-+.+++.|+.|.
T Consensus 49 ~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~-~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~ 127 (237)
T PRK11009 49 VSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWR-GKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHV 127 (237)
T ss_pred EEHHHhhhhccCCCCcEEEEECcCccccCCchhee-eeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHH
Confidence 35666666664333448999999999975321100 000 0 0123445566999999998
Q ss_pred cCCCCeEEEEcCCCH
Q 003029 636 HDPKTTIVVLSGSDR 650 (856)
Q Consensus 636 ~d~g~~V~I~SGR~~ 650 (856)
+ .|+.++++|||+.
T Consensus 128 ~-~G~~I~iVTnR~~ 141 (237)
T PRK11009 128 K-RGDSIYFITGRTA 141 (237)
T ss_pred H-CCCeEEEEeCCCC
Confidence 5 7999999999963
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.22 E-value=2.8 Score=47.65 Aligned_cols=129 Identities=16% Similarity=0.175 Sum_probs=79.3
Q ss_pred eecccccCCh-HHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCC
Q 003029 369 VDRLDMIKGI-PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS 447 (856)
Q Consensus 369 V~Rld~~KGi-~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~ 447 (856)
=+|-...|-+ +..++|.+++.+++|+++ +++...+. .. .+.+++.....+.. .++...
T Consensus 192 GSR~~EI~rllP~~l~aa~~l~~~~p~l~----fvvp~a~~-----~~---~~~i~~~~~~~~~~------~~~~~~--- 250 (373)
T PF02684_consen 192 GSRKSEIKRLLPIFLEAAKLLKKQRPDLQ----FVVPVAPE-----VH---EELIEEILAEYPPD------VSIVII--- 250 (373)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecCCH-----HH---HHHHHHHHHhhCCC------CeEEEc---
Confidence 3477766655 888999999999999865 54333221 11 22233332221111 123322
Q ss_pred CCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEe-----------------CCCCchhhc-cCC---e
Q 003029 448 LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-----------------EFAGAAQSL-GAG---A 506 (856)
Q Consensus 448 v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlS-----------------e~aG~~~~l-g~~---g 506 (856)
..+...++++||+.+++| |.+.+|++..+ .|.|+. .+.|.+-.+ |.. -
T Consensus 251 --~~~~~~~m~~ad~al~~S-----GTaTLE~Al~g----~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PE 319 (373)
T PF02684_consen 251 --EGESYDAMAAADAALAAS-----GTATLEAALLG----VPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPE 319 (373)
T ss_pred --CCchHHHHHhCcchhhcC-----CHHHHHHHHhC----CCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchh
Confidence 245677899999999999 79999999985 554443 333333333 111 1
Q ss_pred EEECCCCHHHHHHHHHHHHcCCH
Q 003029 507 ILVNPWNITEVANAIARALNMSP 529 (856)
Q Consensus 507 ~lVnP~d~~~lA~ai~~aL~~~~ 529 (856)
++-+-.+++.+++++..+|.+++
T Consensus 320 liQ~~~~~~~i~~~~~~ll~~~~ 342 (373)
T PF02684_consen 320 LIQEDATPENIAAELLELLENPE 342 (373)
T ss_pred hhcccCCHHHHHHHHHHHhcCHH
Confidence 12234688999999999998765
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.011 Score=54.14 Aligned_cols=54 Identities=15% Similarity=0.266 Sum_probs=38.0
Q ss_pred EEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHH---HHhcccCce
Q 003029 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD---KNFQEYNLW 663 (856)
Q Consensus 594 I~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~---~~~~~l~lg 663 (856)
|+||+||||... .++-|.+.++|+.|.+ .|..++++|-.+...-+ +.+..+++.
T Consensus 1 ~l~D~dGvl~~g---------------~~~ipga~e~l~~L~~-~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 1 FLFDLDGVLYNG---------------NEPIPGAVEALDALRE-RGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp EEEESTTTSEET---------------TEE-TTHHHHHHHHHH-TTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CEEeCccEeEeC---------------CCcCcCHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 689999999975 2355778999999986 68999999977654444 444444443
|
... |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.024 Score=57.23 Aligned_cols=52 Identities=10% Similarity=0.116 Sum_probs=38.3
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCH
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~ 650 (856)
|++|||.||||+...+.. . ...+..+.|.+.++|++|.+ .|..++|+|.-+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~----~--~~~~~~~~pgv~e~L~~Lk~-~G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYV----H--EIDNFEFIDGVIDALRELKK-MGYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCC----C--CHHHeEECCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 789999999999543211 0 01244567889999999986 7999999997643
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=94.82 E-value=3.5 Score=45.87 Aligned_cols=167 Identities=19% Similarity=0.196 Sum_probs=102.2
Q ss_pred EEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEee-cccccCChHHHHHHHHHHHHhCcCccCceEEEEE
Q 003029 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVD-RLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQI 404 (856)
Q Consensus 326 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~-Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v 404 (856)
..+-.+|.-+|+..-.... ......++-+-|| .-|++-+....|+++..... .+ +.++ |
T Consensus 160 ~~~lyfPt~m~~~~~~~~~-------------~~~~~~~ltILvGNSgd~sNnHieaL~~L~~~~~--~~----~kIi-v 219 (360)
T PF07429_consen 160 ASLLYFPTRMDPALTLSEK-------------NKKNKGKLTILVGNSGDPSNNHIEALEALKQQFG--DD----VKII-V 219 (360)
T ss_pred ceEEEcCCCCchhhhcccc-------------ccCCCCceEEEEcCCCCCCccHHHHHHHHHHhcC--CC----eEEE-E
Confidence 3466778878765322110 0111223333344 66888888888877765432 12 3332 1
Q ss_pred EcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC-cCCChhHHHHHhhc
Q 003029 405 AVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR-DGMNLVSYEFVACQ 483 (856)
Q Consensus 405 ~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~-EG~~Lv~lEama~~ 483 (856)
|- +-+...+++.++|.+.+.++ ||.. .+..+...++.+|+.++++.||++++...| .|+|..++ .+.+
T Consensus 220 --PL-sYg~~n~~Yi~~V~~~~~~l---F~~~---~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~- 288 (360)
T PF07429_consen 220 --PL-SYGANNQAYIQQVIQAGKEL---FGAE---NFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL- 288 (360)
T ss_pred --EC-CCCCchHHHHHHHHHHHHHh---cCcc---ceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc-
Confidence 21 11112345566776665554 4421 355578899999999999999999999975 89998655 3445
Q ss_pred CCCCceEEEeCCCCchhhccCCeEEE----CCCCHHHHHHHHHHHHc
Q 003029 484 DLKKGVLILSEFAGAAQSLGAGAILV----NPWNITEVANAIARALN 526 (856)
Q Consensus 484 ~~~~g~lVlSe~aG~~~~lg~~g~lV----nP~d~~~lA~ai~~aL~ 526 (856)
|.++++|+-.-....+...++.| +.-|...+++|=+++..
T Consensus 289 ---G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 289 ---GKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQLAN 332 (360)
T ss_pred ---CCeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHHHHhh
Confidence 58999999887777773345433 44566666666555544
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.11 Score=54.40 Aligned_cols=63 Identities=8% Similarity=-0.100 Sum_probs=44.1
Q ss_pred HHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC---------CccccCCHHHHHHHHHH
Q 003029 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS---------FLHYLRMKMCMRFLSQN 840 (856)
Q Consensus 770 G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~---------~~~~l~~~~~~~~~l~~ 840 (856)
-..+..+++.++ .+++.++.+|| +.+|+.| =+.++-..+.|.-+.. +.+.+.++.++...|.+
T Consensus 148 P~~l~~~~~~~~------~~~~~~l~VGD-s~~Di~a-A~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~~ 219 (220)
T COG0546 148 PEPLLLLLEKLG------LDPEEALMVGD-SLNDILA-AKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALLAE 219 (220)
T ss_pred HHHHHHHHHHhC------CChhheEEECC-CHHHHHH-HHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHhc
Confidence 456677888888 44578999999 9999999 6666533344444421 12888999888877653
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.032 Score=55.54 Aligned_cols=53 Identities=15% Similarity=0.260 Sum_probs=33.4
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG 647 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG 647 (856)
|+.+||+||||..... +..-.+.+..-.-.++.+.++|++|.+ .|..|+|+|-
T Consensus 1 Kia~fD~DgTLi~~~s--~~~f~~~~~D~~~~~~~v~~~L~~l~~-~Gy~IvIvTN 53 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS--GKKFPKDPDDWKFFPPGVPEALRELHK-KGYKIVIVTN 53 (159)
T ss_dssp SEEEE-SCTTTEE-ST--STTS-SSTCGGEEC-TTHHHHHHHHHH-TTEEEEEEEE
T ss_pred CEEEEeCCCCccCCCC--CCcCcCCHHHhhhcchhHHHHHHHHHh-cCCeEEEEeC
Confidence 6899999999996532 100011111123356689999999986 6999999985
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.096 Score=54.00 Aligned_cols=71 Identities=15% Similarity=0.208 Sum_probs=51.2
Q ss_pred chHHHHHHHHhcCCeEEEEecCCccCCCCC----CCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhh
Q 003029 578 READSIERYLRSNNRLLILGFNATLTEPVD----TPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (856)
Q Consensus 578 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~----~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~ 652 (856)
.++.+.+.+++..+|+|++|+|-||++... +|. .........++|+.+..+.+|.+ .|+.|+|+|=.+...
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~---~~~~~~~~~~tpefk~~~~~l~~-~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPD---NDDIRVLTSVTPDFKILGKRLKN-SNIKISVVTFSDKEL 104 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCC---cchhhhhccCCHHHHHHHHHHHH-CCCeEEEEEccchhh
Confidence 456678888999999999999999998211 110 00011233478999999999985 799999999765543
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.055 Score=57.55 Aligned_cols=56 Identities=18% Similarity=0.306 Sum_probs=43.4
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHH--HHhcccC
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD--KNFQEYN 661 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~--~~~~~l~ 661 (856)
++++++||+||||... ..+-|.+.++|++|.+ .|..++|+|..+....+ +.+..++
T Consensus 7 ~~~~~~~D~dG~l~~~---------------~~~~pga~e~L~~L~~-~G~~~~ivTN~~~~~~~~~~~L~~~g 64 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDG---------------NHTYPGAVQNLNKIIA-QGKPVYFVSNSPRNIFSLHKTLKSLG 64 (242)
T ss_pred cCCEEEEecccccccC---------------CccCccHHHHHHHHHH-CCCEEEEEeCCCCChHHHHHHHHHCC
Confidence 4678999999999875 2356889999999986 69999999887665433 5555554
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=94.35 E-value=0.066 Score=54.24 Aligned_cols=53 Identities=13% Similarity=0.110 Sum_probs=39.6
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 649 (856)
+|+++||.||||...... +..... ...+-+.+.++|++|.+ .|..++|+|+.+
T Consensus 3 ~~~~~~d~~~t~~~~~~~---~~~~~~--~~~~~pgv~e~L~~Lk~-~g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDG---YVKSPD--EWIPIPGSIEAIARLKQ-AGYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCcc---ccCCHH--HeEECCCHHHHHHHHHH-CCCEEEEEeCCc
Confidence 689999999999765321 222221 33567889999999986 699999999876
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.12 Score=51.77 Aligned_cols=65 Identities=20% Similarity=0.228 Sum_probs=48.5
Q ss_pred HHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCC-eEEEEcCCC-------HhhHHHHh
Q 003029 586 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKT-TIVVLSGSD-------RNVLDKNF 657 (856)
Q Consensus 586 y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~-~V~I~SGR~-------~~~l~~~~ 657 (856)
.++..+|.++||.|.||++.. ...++++..+.++++++.-+. .|+|+|-.. ...++..-
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~-------------~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~ 102 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPY-------------EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALE 102 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCC-------------cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHH
Confidence 466789999999999999773 567899999999999874332 599999863 44454444
Q ss_pred cccCce
Q 003029 658 QEYNLW 663 (856)
Q Consensus 658 ~~l~lg 663 (856)
..+++.
T Consensus 103 ~~lgIp 108 (168)
T PF09419_consen 103 KALGIP 108 (168)
T ss_pred HhhCCc
Confidence 455543
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=94.27 E-value=5.5 Score=45.15 Aligned_cols=73 Identities=19% Similarity=0.085 Sum_probs=52.0
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHH
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 518 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA 518 (856)
+. +.+.++..++.+|++.||+++-.|. | ...||.+.+ .|+|.- ..-.+.+ |.+.++| +.|++++.
T Consensus 264 v~-l~~~l~~~~~l~Ll~~a~~vitdSS----g-gi~EA~~lg----~Pvv~l--~~R~e~~~~g~nvl~v-g~~~~~I~ 330 (365)
T TIGR03568 264 FR-LFKSLGQERYLSLLKNADAVIGNSS----S-GIIEAPSFG----VPTINI--GTRQKGRLRADSVIDV-DPDKEEIV 330 (365)
T ss_pred EE-EECCCChHHHHHHHHhCCEEEEcCh----h-HHHhhhhcC----CCEEee--cCCchhhhhcCeEEEe-CCCHHHHH
Confidence 54 5889999999999999999995552 1 238999984 555522 2222222 4556667 77899999
Q ss_pred HHHHHHHc
Q 003029 519 NAIARALN 526 (856)
Q Consensus 519 ~ai~~aL~ 526 (856)
+++.++++
T Consensus 331 ~a~~~~~~ 338 (365)
T TIGR03568 331 KAIEKLLD 338 (365)
T ss_pred HHHHHHhC
Confidence 99999654
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.078 Score=58.16 Aligned_cols=68 Identities=18% Similarity=0.150 Sum_probs=49.6
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
+.+++++|+||||....... -.+-.......+.+.+++.|++|.+ .|..++|+|||+....+..+..+
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~-~g~~i~i~T~r~~~~~~~~l~~l 224 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRS--PYDWTKVKEDKPNPMVVELVKMYKA-AGYEIIVVSGRDGVCEEDTVEWL 224 (300)
T ss_pred CCCEEEEECCCcCcCCCCCC--ccchhhcccCCCChhHHHHHHHHHh-CCCEEEEEeCCChhhHHHHHHHH
Confidence 45789999999999764210 0000001234678899999999986 69999999999998887777665
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=94.16 E-value=0.081 Score=52.80 Aligned_cols=53 Identities=15% Similarity=0.182 Sum_probs=38.0
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCC
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR 648 (856)
|++|||.||||....+. ....+.+ ...++-+.+.++|++|.+ +|.+++|+|..
T Consensus 2 ~~~~~d~dg~l~~~~~~--~~~~~~~-~~~~~~pgv~e~L~~L~~-~g~~l~IvSN~ 54 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPS--DFQVDAL-EKLRFEKGVIPALLKLKK-AGYKFVMVTNQ 54 (161)
T ss_pred CEEEEeCCCCccccCCC--ccccCCH-HHeeECCCHHHHHHHHHH-CCCeEEEEeCC
Confidence 68999999999985321 1111111 234567889999999986 79999999985
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=94.15 E-value=1.4 Score=50.67 Aligned_cols=138 Identities=16% Similarity=0.193 Sum_probs=80.3
Q ss_pred eEEEeec-ccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhc---------ccC
Q 003029 365 VMLGVDR-LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING---------RFG 434 (856)
Q Consensus 365 iIl~V~R-ld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~---------~~g 434 (856)
+++.-+| =+-.++++..++|++.+.++ |+ +.++....+. ..+..+++.+.+. .++. .|.
T Consensus 209 llLpGSR~ae~~~~lp~~l~al~~L~~~-~~----~~~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~~~ 277 (396)
T TIGR03492 209 ALLPGSRPPEAYRNLKLLLRALEALPDS-QP----FVFLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSLFQ 277 (396)
T ss_pred EEECCCCHHHHHccHHHHHHHHHHHhhC-CC----eEEEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchhhc
Confidence 3444556 44556888999999998655 54 4455444332 2233333333221 1100 000
Q ss_pred CCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCc---hhhcc------CC
Q 003029 435 TLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA---AQSLG------AG 505 (856)
Q Consensus 435 ~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~---~~~lg------~~ 505 (856)
. ..+.++ ....+...+|++||++|..| |.+..|+++++ .|.|+--+.+- +..+. ..
T Consensus 278 ~---~~~~v~---~~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg----~P~Ilip~~~~q~na~~~~~~~~l~g~ 342 (396)
T TIGR03492 278 K---GTLEVL---LGRGAFAEILHWADLGIAMA-----GTATEQAVGLG----KPVIQLPGKGPQFTYGFAEAQSRLLGG 342 (396)
T ss_pred c---CceEEE---echHhHHHHHHhCCEEEECc-----CHHHHHHHHhC----CCEEEEeCCCCHHHHHHHHhhHhhcCC
Confidence 0 012221 12367899999999999986 45669999994 67777653222 11110 25
Q ss_pred eEEECCCCHHHHHHHHHHHHcCC
Q 003029 506 AILVNPWNITEVANAIARALNMS 528 (856)
Q Consensus 506 g~lVnP~d~~~lA~ai~~aL~~~ 528 (856)
++.+...+++.+++++.++|+++
T Consensus 343 ~~~l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 343 SVFLASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred EEecCCCCHHHHHHHHHHHHcCH
Confidence 56666678899999999999854
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=94.15 E-value=6.7 Score=44.15 Aligned_cols=243 Identities=15% Similarity=0.103 Sum_probs=119.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhh--cCCEEEEeCHHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVSACTR 308 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll--~aDlIgf~t~~~~~~Fl~~~~~ 308 (856)
.+|+|.||.=-.-.++..+-....++||++. |-=--+.+.. -|.-++..|.+. -||+-.--|..+.++.++
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d~~--~g~~de~~R~~i~~la~lhf~~t~~~~~~L~~---- 139 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGDRT--EGMPDEINRHAIDKLAHLHFAPTEEARERLLQ---- 139 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S-TT--SSTTHHHHHHHHHHH-SEEEESSHHHHHHHHH----
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCccccC--CCCchhhhhhhhhhhhhhhccCCHHHHHHHHh----
Confidence 3499999876666666555555667887652 2211111211 123344444322 356666667776666553
Q ss_pred HhCcccCCCceeeCCeeEEEEEe-ecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeeccccc---CChHHHHHH
Q 003029 309 ILGFEGTPEGVEDQGRLTRVAAF-PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMI---KGIPQKLLA 384 (856)
Q Consensus 309 ~lg~~~~~~~v~~~g~~~~v~vi-P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~---KGi~~~L~A 384 (856)
.|.+ ..+|.++ ..++|.-........+... ...+.....++.+++..=|.... ......+.+
T Consensus 140 -~G~~-----------~~rI~~vG~~~~D~l~~~~~~~~~~~~--~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~ 205 (346)
T PF02350_consen 140 -EGEP-----------PERIFVVGNPGIDALLQNKEEIEEKYK--NSGILQDAPKPYILVTLHPVTNEDNPERLEQILEA 205 (346)
T ss_dssp -TT-------------GGGEEE---HHHHHHHHHHHTTCC-HH--HHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHH
T ss_pred -cCCC-----------CCeEEEEChHHHHHHHHhHHHHhhhhh--hHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHH
Confidence 2321 2233333 4567754322211111110 11221122333444444343332 345677777
Q ss_pred HHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 003029 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (856)
Q Consensus 385 f~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v 464 (856)
++.+.+. ++ +.+|....++ | .....+.+...+++ .+++ ..+++..++.++++.|++.|
T Consensus 206 l~~L~~~-~~----~~vi~~~hn~----p---~~~~~i~~~l~~~~---------~v~~-~~~l~~~~~l~ll~~a~~vv 263 (346)
T PF02350_consen 206 LKALAER-QN----VPVIFPLHNN----P---RGSDIIIEKLKKYD---------NVRL-IEPLGYEEYLSLLKNADLVV 263 (346)
T ss_dssp HHHHHHH-TT----EEEEEE--S-----H---HHHHHHHHHHTT-T---------TEEE-E----HHHHHHHHHHESEEE
T ss_pred HHHHHhc-CC----CcEEEEecCC----c---hHHHHHHHHhcccC---------CEEE-ECCCCHHHHHHHHhcceEEE
Confidence 7777766 44 3344443211 2 22333333332221 2554 67899999999999999998
Q ss_pred ECCCCcCCChhHH-HHHhhcCCCCceEEEeCCCCchhhc-c-CCeEEECCCCHHHHHHHHHHHHcC
Q 003029 465 VTSLRDGMNLVSY-EFVACQDLKKGVLILSEFAGAAQSL-G-AGAILVNPWNITEVANAIARALNM 527 (856)
Q Consensus 465 ~~S~~EG~~Lv~l-Eama~~~~~~g~lVlSe~aG~~~~l-g-~~g~lVnP~d~~~lA~ai~~aL~~ 527 (856)
--|- .+. ||.+++ .|+|.=...|-.++. . ...++|. .|.+++.++|.+++..
T Consensus 264 gdSs------GI~eEa~~lg----~P~v~iR~~geRqe~r~~~~nvlv~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 264 GDSS------GIQEEAPSLG----KPVVNIRDSGERQEGRERGSNVLVG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp ESSH------HHHHHGGGGT------EEECSSS-S-HHHHHTTSEEEET-SSHHHHHHHHHHHHH-
T ss_pred EcCc------cHHHHHHHhC----CeEEEecCCCCCHHHHhhcceEEeC-CCHHHHHHHHHHHHhC
Confidence 8773 345 999994 677766667766665 1 3455665 8999999999999975
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.067 Score=56.76 Aligned_cols=50 Identities=16% Similarity=0.225 Sum_probs=41.2
Q ss_pred EEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEc---CCCHhhHHHHhcc
Q 003029 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQE 659 (856)
Q Consensus 594 I~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~ 659 (856)
++||+||||.+.. .+-+.+.++|+.|.+ .|.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~~~---------------~~~~~a~e~i~~l~~-~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWLGH---------------KPIPGAAEALNRLRA-KGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCcCC---------------ccCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHH
Confidence 5799999999862 234589999999986 689999998 9999988877766
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=93.83 E-value=2.8 Score=46.90 Aligned_cols=198 Identities=14% Similarity=0.179 Sum_probs=106.5
Q ss_pred cchHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHH
Q 003029 577 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 656 (856)
Q Consensus 577 l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~ 656 (856)
||.+++..--+..+-+|+-||=|+||-+++. .-..+..++.-|-+|-+ .|..|.|+|.=.+...+++
T Consensus 133 LN~AQi~al~~~~~L~LvTFDgDvTLY~DG~------------sl~~d~pvi~~ii~LL~-~gv~VgIVTAAGY~~a~kY 199 (408)
T PF06437_consen 133 LNTAQIMALAKNYGLKLVTFDGDVTLYEDGA------------SLEPDNPVIPRIIKLLR-RGVKVGIVTAAGYPGAEKY 199 (408)
T ss_pred HHHHHHHHhcccCCceEEEEcCCcccccCCC------------CCCCCchHHHHHHHHHh-cCCeEEEEeCCCCCChHHH
Confidence 3445555444445789999999999999853 22345556666666665 5999999999888776655
Q ss_pred hccc-C----------c---------eEEeeCceEEEec-----------CCeeeecccccCChHHH-HHHHHHHHH---
Q 003029 657 FQEY-N----------L---------WLAAENGMFLRCT-----------TGKWMTTMPEHLNMEWV-DSLKHVFEY--- 701 (856)
Q Consensus 657 ~~~l-~----------l---------gliaenG~~i~~~-----------~~~w~~~~~~~~~~~w~-~~v~~i~~~--- 701 (856)
...+ | + -+-+|.-+.++.. .+.|... + -..|. +.+.++++.
T Consensus 200 ~~RL~GLL~a~~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~--~--m~~W~~~dI~~lLD~AE~ 275 (408)
T PF06437_consen 200 EERLHGLLDAFKDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLP--E--MKTWSEEDITELLDIAEA 275 (408)
T ss_pred HHHHHHHHHHHHhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccCc--c--ccCcCHHHHHHHHHHHHH
Confidence 4443 1 1 2334444455431 1245321 1 12343 344444432
Q ss_pred ----HHh--cCCCcEEeeecceEEEEeecCChhhhHHHHHHHH----HHHhcC--CCCCCCeEEEEcC--cEEEEEeCCC
Q 003029 702 ----FTE--RTPRSHFEQRETSLVWNYKYADVEFGRIQARDML----QHLWTG--PISNASVEVVQGS--KSVEVRAVGV 767 (856)
Q Consensus 702 ----~~~--rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~----~~L~~~--~~~~~~v~v~~g~--~~vEV~p~gv 767 (856)
... ..| .-|-.|+-++-+--. ....+...|.+|+. ..| +. .-.+-++-...|. -+|+| .
T Consensus 276 ~L~~~~~~l~Lp-a~IiRK~RAVGivP~-~~~ki~rE~LEE~VL~vq~~L-~~~~~~~~ipfCAFNGGsDVwVDI----G 348 (408)
T PF06437_consen 276 ALRDCVKRLNLP-ATIIRKERAVGIVPK-PGVKIIREQLEEIVLTVQKTL-EESPPGRRIPFCAFNGGSDVWVDI----G 348 (408)
T ss_pred HHHHHHHHcCCC-eeEEeecceeeEecC-CCCcchhhhHHHHHHHHHHHH-HhcCCCCCCceeeecCCcceEEEc----C
Confidence 221 133 334445444432211 11111223333332 333 21 1122455556553 36776 4
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG 801 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~ 801 (856)
||.-||..+.+.+. +...|.+.+++-+|| .+
T Consensus 349 dKs~GV~~lQ~y~~--~~~~i~~~~tLHVGD-QF 379 (408)
T PF06437_consen 349 DKSLGVRALQKYFD--PEGGIKPSETLHVGD-QF 379 (408)
T ss_pred CcHHhHHHHHHHHH--hccCCCccceeeehh-hh
Confidence 79999999888881 011167899999999 54
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=93.72 E-value=0.066 Score=54.00 Aligned_cols=53 Identities=15% Similarity=0.165 Sum_probs=39.3
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 649 (856)
+.+|+|++|.||||..+..-. ....-.+-|.+.+.|++|.+ .|.+++|+|+.+
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~-------~~~~~~~~pgv~e~L~~Lk~-~G~~l~I~Tn~~ 54 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIH-------YPGSFTLFPFTKASLQKLKA-NHIKIFSFTNQP 54 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCC-------CHHHeEECCCHHHHHHHHHH-CCCEEEEEECCc
Confidence 468999999999997652100 00133567899999999986 699999999864
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=93.67 E-value=0.11 Score=49.74 Aligned_cols=84 Identities=18% Similarity=0.122 Sum_probs=44.2
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccH----HHH-HHhhcCCEEEEeCHHHHHHHHH
Q 003029 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRS----DLL-RAVLAADLVGFHTYDYARHFVS 304 (856)
Q Consensus 230 ~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~----~il-~~ll~aDlIgf~t~~~~~~Fl~ 304 (856)
.+.|+|++|+++..+++.++++. .++|+.+.+|..+.... .++.. .+. ..+-.||.|...+....+.+.+
T Consensus 72 ~~~Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 72 ERPDVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp ---SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred cCCeEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 46799999998877777777733 47999999997543211 11111 122 3355789999998877776653
Q ss_pred HHHHHhCcccCCCceeeCCeeEEEEEeecc
Q 003029 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIG 334 (856)
Q Consensus 305 ~~~~~lg~~~~~~~v~~~g~~~~v~viP~G 334 (856)
.|. ...+|.++|||
T Consensus 147 -----~g~-----------~~~ri~vipnG 160 (160)
T PF13579_consen 147 -----YGV-----------PPDRIHVIPNG 160 (160)
T ss_dssp -----H--------------GGGEEE----
T ss_pred -----hCC-----------CCCcEEEeCcC
Confidence 222 34578899987
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=93.33 E-value=0.091 Score=55.31 Aligned_cols=70 Identities=14% Similarity=0.099 Sum_probs=47.3
Q ss_pred CCeEEEEecCCccCCCCCCCC-C-CCc------c----ccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhh---HH
Q 003029 590 NNRLLILGFNATLTEPVDTPG-R-RGD------Q----IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV---LD 654 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~-~-~~~------~----~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~---l~ 654 (856)
.+-+++||+|-|++++.+--. + ++. . .....+.+-+.++++++.|.+ .|+.|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~-~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIE-LGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHH
Confidence 456899999999998642000 0 000 0 112355677899999999986 799999999999766 33
Q ss_pred HHhccc
Q 003029 655 KNFQEY 660 (856)
Q Consensus 655 ~~~~~l 660 (856)
+++...
T Consensus 155 ~nL~~~ 160 (229)
T TIGR01675 155 DNLINA 160 (229)
T ss_pred HHHHHc
Confidence 444443
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=93.32 E-value=0.17 Score=51.06 Aligned_cols=37 Identities=19% Similarity=0.378 Sum_probs=31.1
Q ss_pred hhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 625 PDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 625 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
+++.+.|+.+.+ .|..|+|+||-+...++.....+++
T Consensus 92 ~~~~e~i~~~~~-~~~~v~IvS~~~~~~i~~~~~~~~i 128 (192)
T PF12710_consen 92 PDAMELIRELKD-NGIKVVIVSGSPDEIIEPIAERLGI 128 (192)
T ss_dssp TTHHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTS
T ss_pred hhHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcCC
Confidence 567899999876 6999999999999999888776654
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=93.01 E-value=0.18 Score=52.40 Aligned_cols=61 Identities=8% Similarity=-0.091 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-----------CccccCCHHHHHHH
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS-----------FLHYLRMKMCMRFL 837 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~-----------~~~~l~~~~~~~~~ 837 (856)
|...+.+++++++ .+++.+++||| +.+|+.+ -+.++- .+|.|... +.|.+.++.++..+
T Consensus 140 ~p~~~~~~~~~~~------~~~~~~~~iGD-s~~Di~a-a~~aG~--~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~ 209 (214)
T PRK13288 140 DPEPVLKALELLG------AKPEEALMVGD-NHHDILA-GKNAGT--KTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAI 209 (214)
T ss_pred CcHHHHHHHHHcC------CCHHHEEEECC-CHHHHHH-HHHCCC--eEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHH
Confidence 4556677888887 56789999999 9999888 544432 34444211 12778888877666
Q ss_pred HH
Q 003029 838 SQ 839 (856)
Q Consensus 838 l~ 839 (856)
+.
T Consensus 210 i~ 211 (214)
T PRK13288 210 VG 211 (214)
T ss_pred Hh
Confidence 54
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.97 E-value=0.18 Score=56.69 Aligned_cols=55 Identities=18% Similarity=0.199 Sum_probs=40.2
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCC
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR 648 (856)
++|++|||.||||....... ...+. .....+-|.+.+.|..|.+ .|.+++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~--y~~~~-~~~~~l~pGV~e~L~~Lk~-~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTD--FQVDS-LDKLAFEPGVIPALLKLQK-AGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCcc--ccccC-cccceECcCHHHHHHHHHh-CCCeEEEEECC
Confidence 46899999999999863211 00111 1245678899999999975 79999999984
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=92.94 E-value=8.9 Score=43.41 Aligned_cols=87 Identities=21% Similarity=0.203 Sum_probs=58.1
Q ss_pred HHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCch--hh------c-c-CCeEEECCCC--HHHHH
Q 003029 451 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA--QS------L-G-AGAILVNPWN--ITEVA 518 (856)
Q Consensus 451 ~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~--~~------l-g-~~g~lVnP~d--~~~lA 518 (856)
+++.++|++||+.+.=|= ++++.|..|++ .|.|+=-+...+ ++ + . ..|..+.-.+ ++.++
T Consensus 244 ~dm~~~~~~ADLvIsRaG----a~Ti~E~~a~g----~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~ 315 (357)
T COG0707 244 DDMAALLAAADLVISRAG----ALTIAELLALG----VPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLA 315 (357)
T ss_pred hhHHHHHHhccEEEeCCc----ccHHHHHHHhC----CCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHH
Confidence 569999999999886542 58899999995 677766665552 22 2 1 2466665555 88999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHhc
Q 003029 519 NAIARALNMSPEEREKRHWHNFTHVTTH 546 (856)
Q Consensus 519 ~ai~~aL~~~~~er~~r~~~~~~~v~~~ 546 (856)
+.|.++++. ++....|..+.+.....+
T Consensus 316 ~~i~~l~~~-~~~l~~m~~~a~~~~~p~ 342 (357)
T COG0707 316 ELILRLLSN-PEKLKAMAENAKKLGKPD 342 (357)
T ss_pred HHHHHHhcC-HHHHHHHHHHHHhcCCCC
Confidence 999999986 334444444444433333
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.73 E-value=0.18 Score=51.71 Aligned_cols=49 Identities=6% Similarity=-0.141 Sum_probs=36.7
Q ss_pred cceEEEEecCCcccccccccccccCcceEEeCCC-------Cc-cccCCHHHHHHHHHHHHH
Q 003029 790 IDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS-------FL-HYLRMKMCMRFLSQNYLM 843 (856)
Q Consensus 790 ~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~-------~~-~~l~~~~~~~~~l~~~~~ 843 (856)
.+.+++||| +.+|..| .++++ .+|.++.. .+ +.+.++.++..+|..++.
T Consensus 144 ~~~~v~iGD-s~~D~~~-~~aa~---~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~ 200 (205)
T PRK13582 144 GYRVIAAGD-SYNDTTM-LGEAD---AGILFRPPANVIAEFPQFPAVHTYDELLAAIDKASA 200 (205)
T ss_pred CCeEEEEeC-CHHHHHH-HHhCC---CCEEECCCHHHHHhCCcccccCCHHHHHHHHHHHHh
Confidence 367999999 9999999 77665 34555432 12 479999999998888764
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=92.62 E-value=0.1 Score=54.49 Aligned_cols=62 Identities=13% Similarity=0.061 Sum_probs=39.6
Q ss_pred CCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC--------C-CccccCCHHHHHH
Q 003029 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS--------S-FLHYLRMKMCMRF 836 (856)
Q Consensus 766 gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~--------~-~~~~l~~~~~~~~ 836 (856)
|..|..+++. ++ ..++.+++||| +.+|..| .+.+ ++.+.-+. . +.+.+.+..++..
T Consensus 146 ~~~K~~~l~~----~~------~~~~~~i~iGD-s~~Di~a-a~~A---g~~~a~~~l~~~~~~~~~~~~~~~~f~ei~~ 210 (219)
T PRK09552 146 GCCKPSLIRK----LS------DTNDFHIVIGD-SITDLEA-AKQA---DKVFARDFLITKCEELGIPYTPFETFHDVQT 210 (219)
T ss_pred CCchHHHHHH----hc------cCCCCEEEEeC-CHHHHHH-HHHC---CcceeHHHHHHHHHHcCCCccccCCHHHHHH
Confidence 4457776654 34 34568999999 9999988 6544 33222110 1 2266788888888
Q ss_pred HHHHHH
Q 003029 837 LSQNYL 842 (856)
Q Consensus 837 ~l~~~~ 842 (856)
.|+++.
T Consensus 211 ~l~~~~ 216 (219)
T PRK09552 211 ELKHLL 216 (219)
T ss_pred HHHHHh
Confidence 777653
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=92.41 E-value=0.25 Score=50.03 Aligned_cols=70 Identities=16% Similarity=0.167 Sum_probs=48.6
Q ss_pred CeEEEEecCCccCCCCCC-----CCCCCcccc-------ccccCCChhHHHHHHHhhcCCCCeEEEEcCC-CHhhHHHHh
Q 003029 591 NRLLILGFNATLTEPVDT-----PGRRGDQIR-------EMELKLHPDLKQPLNALCHDPKTTIVVLSGS-DRNVLDKNF 657 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~-----p~~~~~~~~-------~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR-~~~~l~~~~ 657 (856)
.||++||+|+||.+..-. |-...++.. .....+-+.+.++|+.|.+ +|..++|+|+. +...++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKD-AGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHH
Confidence 489999999999986421 100011111 1234566889999999986 79999999998 888777777
Q ss_pred cccC
Q 003029 658 QEYN 661 (856)
Q Consensus 658 ~~l~ 661 (856)
+.++
T Consensus 81 ~~~~ 84 (174)
T TIGR01685 81 GTFE 84 (174)
T ss_pred HhCC
Confidence 6654
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=92.38 E-value=0.23 Score=58.69 Aligned_cols=71 Identities=7% Similarity=0.110 Sum_probs=46.4
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCH------------hhHHHH
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR------------NVLDKN 656 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~------------~~l~~~ 656 (856)
...|++|||+||||......- .... .+..-..+.+.+.+.|++|.+ .|..++|+|..+. ..+..+
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~-~~~~-~~~d~~~l~pgV~e~L~~L~~-~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~i 242 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGK-VFPK-GPDDWQIIFPEIPEKLKELEA-DGFKICIFTNQGGIARGKINADDFKAKIEAI 242 (526)
T ss_pred ccCcEEEEECCCCccccCCCc-cCCC-CHHHeeecccCHHHHHHHHHH-CCCEEEEEECCcccccCcccHHHHHHHHHHH
Confidence 457999999999999653100 0000 000111256889999999986 6999999998665 235566
Q ss_pred hcccCc
Q 003029 657 FQEYNL 662 (856)
Q Consensus 657 ~~~l~l 662 (856)
+..+++
T Consensus 243 L~~lgi 248 (526)
T TIGR01663 243 VAKLGV 248 (526)
T ss_pred HHHcCC
Confidence 666654
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=92.25 E-value=0.26 Score=53.28 Aligned_cols=73 Identities=14% Similarity=0.191 Sum_probs=47.7
Q ss_pred cCCeEEEEecCCccCCCCCCCC-----CCC---ccc----cccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHH--
Q 003029 589 SNNRLLILGFNATLTEPVDTPG-----RRG---DQI----REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD-- 654 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~-----~~~---~~~----~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~-- 654 (856)
.+...|+||+|+|+++..+--+ ..+ ... ......+-|.+.+.|+.|.+ .|..++|+|+|+....+
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~-~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANS-KGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCeEEEEeCCCcchHHHH
Confidence 4567899999999997642100 000 001 01234566789999999986 69999999999865544
Q ss_pred -HHhcccCc
Q 003029 655 -KNFQEYNL 662 (856)
Q Consensus 655 -~~~~~l~l 662 (856)
.++...++
T Consensus 152 ~~~Lkk~Gi 160 (266)
T TIGR01533 152 LKNLKRFGF 160 (266)
T ss_pred HHHHHHcCc
Confidence 55555444
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=92.06 E-value=0.32 Score=47.66 Aligned_cols=70 Identities=17% Similarity=0.226 Sum_probs=48.1
Q ss_pred CCeEEEEecCCccCCCCC--CCCCC-Ccc-cc--------ccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHh
Q 003029 590 NNRLLILGFNATLTEPVD--TPGRR-GDQ-IR--------EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 657 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~--~p~~~-~~~-~~--------~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 657 (856)
+++++++|+||||+.... .++.. ..+ .. .....+-|-+.+.|..|.+ +..++|+|+.+...++..+
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASE--LFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHh--ccEEEEEeCCcHHHHHHHH
Confidence 357899999999998632 11100 000 00 1122456789999999973 7999999999999998888
Q ss_pred cccC
Q 003029 658 QEYN 661 (856)
Q Consensus 658 ~~l~ 661 (856)
+.++
T Consensus 79 ~~l~ 82 (148)
T smart00577 79 DLLD 82 (148)
T ss_pred HHhC
Confidence 7764
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=91.91 E-value=0.25 Score=49.22 Aligned_cols=40 Identities=18% Similarity=0.374 Sum_probs=34.9
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCccccccccccc
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFL 811 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~ 811 (856)
+.+.+|+.+++.+++.++ ++++.++++|| +.||.+| ++.+
T Consensus 138 ~~~~~K~~~l~~~~~~~~------~~~~~~~~iGD-s~~D~~~-~~~a 177 (177)
T TIGR01488 138 PEGECKGKVLKELLEESK------ITLKKIIAVGD-SVNDLPM-LKLA 177 (177)
T ss_pred CCcchHHHHHHHHHHHhC------CCHHHEEEEeC-CHHHHHH-HhcC
Confidence 567899999999999887 56789999999 9999999 8754
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=91.89 E-value=0.092 Score=52.42 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=22.6
Q ss_pred hhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 625 PDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 625 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
+.+.+.|+.|.+ .|..++|+||.....++.++..++
T Consensus 76 ~g~~~~l~~l~~-~g~~~~ivS~~~~~~i~~~~~~~g 111 (177)
T TIGR01488 76 PGARELISWLKE-RGIDTVIVSGGFDFFVEPVAEKLG 111 (177)
T ss_pred cCHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcC
Confidence 455666666654 466677777776666666666554
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=91.70 E-value=0.42 Score=51.56 Aligned_cols=57 Identities=5% Similarity=-0.078 Sum_probs=34.0
Q ss_pred HHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcc-eEEeCCC--------CccccCCHHHHHHHHH
Q 003029 772 AIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIS-TVRLDSS--------FLHYLRMKMCMRFLSQ 839 (856)
Q Consensus 772 av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~-~v~V~~~--------~~~~l~~~~~~~~~l~ 839 (856)
.+.+++++++ .+++.+++||| +.+|+.+ +...|+ +|.|... +.|-+.++.++...+-
T Consensus 170 ~~~~a~~~l~------~~p~~~l~IgD-s~~Di~a----A~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~~~ 235 (260)
T PLN03243 170 MFMYAAERLG------FIPERCIVFGN-SNSSVEA----AHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVVDL 235 (260)
T ss_pred HHHHHHHHhC------CChHHeEEEcC-CHHHHHH----HHHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHHHH
Confidence 4455566677 56788999999 8888665 444443 4455321 1255666666554443
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=91.69 E-value=22 Score=40.34 Aligned_cols=72 Identities=14% Similarity=0.142 Sum_probs=49.9
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCc----hhhc-c-CCeEEECCC--CHH
Q 003029 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA----AQSL-G-AGAILVNPW--NIT 515 (856)
Q Consensus 444 ~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~----~~~l-g-~~g~lVnP~--d~~ 515 (856)
+.+++++. +++..||++| ..-|+ -+..|+++++ .|+|+.-..+= +..+ . ..|+.+++. +.+
T Consensus 292 ~~~~~p~~---~ll~~~d~~I---~hgG~-~t~~eal~~G----vP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~ 360 (401)
T cd03784 292 VVDFVPHD---WLLPRCAAVV---HHGGA-GTTAAALRAG----VPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAE 360 (401)
T ss_pred EeCCCCHH---HHhhhhheee---ecCCc-hhHHHHHHcC----CCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHH
Confidence 46777765 4578899999 34565 5679999994 77777766541 2222 1 235555554 789
Q ss_pred HHHHHHHHHHc
Q 003029 516 EVANAIARALN 526 (856)
Q Consensus 516 ~lA~ai~~aL~ 526 (856)
++++++.++|+
T Consensus 361 ~l~~al~~~l~ 371 (401)
T cd03784 361 RLAAALRRLLD 371 (401)
T ss_pred HHHHHHHHHhC
Confidence 99999999997
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.40 E-value=0.076 Score=51.88 Aligned_cols=46 Identities=15% Similarity=0.131 Sum_probs=39.7
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
-+|-.+.+.|+++++ +.++++.++|| |.||.++ |+.+ ++++.|.+.
T Consensus 82 ~dK~~a~~~L~~~~~------l~~e~~ayiGD-D~~Dlpv-m~~v---Gls~a~~dA 127 (170)
T COG1778 82 SDKLAAFEELLKKLN------LDPEEVAYVGD-DLVDLPV-MEKV---GLSVAVADA 127 (170)
T ss_pred HhHHHHHHHHHHHhC------CCHHHhhhhcC-ccccHHH-HHHc---CCccccccc
Confidence 489999999999999 67899999999 9999999 7755 777777654
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=91.26 E-value=0.022 Score=60.25 Aligned_cols=84 Identities=8% Similarity=0.095 Sum_probs=51.7
Q ss_pred CCeEEEEecCCccCCCCCC------------CCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHh
Q 003029 590 NNRLLILGFNATLTEPVDT------------PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 657 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~------------p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 657 (856)
+...|+||+|+|++++... |.....-.......+-|.+++.++.+.+ .|..|+++|||+...-+...
T Consensus 71 ~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~-~G~~V~~iT~R~~~~r~~T~ 149 (229)
T PF03767_consen 71 KPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARS-RGVKVFFITGRPESQREATE 149 (229)
T ss_dssp SEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHH-TTEEEEEEEEEETTCHHHHH
T ss_pred CCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHH-CCCeEEEEecCCchhHHHHH
Confidence 4568999999999864211 0000000001123444568899999986 79999999999988666555
Q ss_pred ccc-CceEEeeCceEEEe
Q 003029 658 QEY-NLWLAAENGMFLRC 674 (856)
Q Consensus 658 ~~l-~lgliaenG~~i~~ 674 (856)
..+ ..|+-.-++.+++.
T Consensus 150 ~nL~~~G~~~~~~l~lr~ 167 (229)
T PF03767_consen 150 KNLKKAGFPGWDHLILRP 167 (229)
T ss_dssp HHHHHHTTSTBSCGEEEE
T ss_pred HHHHHcCCCccchhcccc
Confidence 555 23433335555554
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=91.19 E-value=0.17 Score=52.57 Aligned_cols=41 Identities=12% Similarity=0.037 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHhCcCCcCCCC-cceEEEEecCCcccccccccccccCcce--EEe
Q 003029 769 KGAAIDRILAEIVHSKKMKTA-IDYVLCIGHFLGKNCNLPLQFLMQTIST--VRL 820 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~-~d~vla~GD~~~nDe~M~f~~~~~~~~~--v~V 820 (856)
+..++.+++++++ ++ ++.+++||| ..+|+.+ ++..|+. |.|
T Consensus 147 ~p~~~~~a~~~~~------~~~~~~~~~igD-~~~Di~a----a~~aG~~~~i~~ 190 (220)
T TIGR03351 147 APDLILRAMELTG------VQDVQSVAVAGD-TPNDLEA----GINAGAGAVVGV 190 (220)
T ss_pred CHHHHHHHHHHcC------CCChhHeEEeCC-CHHHHHH----HHHCCCCeEEEE
Confidence 4556677777777 43 688999999 8888766 5555543 445
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=91.09 E-value=0.32 Score=48.20 Aligned_cols=63 Identities=11% Similarity=0.125 Sum_probs=43.0
Q ss_pred EEEEecCCccCCCCCCCCCCCcccccc-ccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhH---HHHhccc
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREM-ELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL---DKNFQEY 660 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~-~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l---~~~~~~l 660 (856)
++++|+|||++.+.- +++-.+-. ....++-+.++.+++++ +|..++-+|+|+.... ..|+...
T Consensus 1 VVvsDIDGTiT~SD~----~G~i~~~~G~d~~h~g~~~l~~~i~~-~GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 1 VVVSDIDGTITKSDV----LGHILPILGKDWTHPGAAELYRKIAD-NGYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred CEEEeccCCcCccch----hhhhhhccCchhhhhcHHHHHHHHHH-CCeEEEEECcCcHHHHHHHHHHHHHH
Confidence 478999999998731 11111100 12567789999999985 7999999999997654 3455544
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.04 E-value=0.41 Score=49.98 Aligned_cols=42 Identities=2% Similarity=-0.155 Sum_probs=30.2
Q ss_pred HHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC
Q 003029 771 AAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS 822 (856)
Q Consensus 771 ~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~ 822 (856)
..+..+++.+| .+++++++||| +.+|+++ -+.++- -+|.|..
T Consensus 152 ~~~~~~~~~~~------~~~~~~~~igD-s~~Di~a-A~~aG~--~~i~v~~ 193 (222)
T PRK10826 152 EVYLNCAAKLG------VDPLTCVALED-SFNGMIA-AKAARM--RSIVVPA 193 (222)
T ss_pred HHHHHHHHHcC------CCHHHeEEEcC-ChhhHHH-HHHcCC--EEEEecC
Confidence 45677888888 56899999999 9999888 444432 3555643
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.72 E-value=0.41 Score=49.79 Aligned_cols=61 Identities=8% Similarity=-0.117 Sum_probs=44.4
Q ss_pred HHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC-----------CCccccCCHHHHHHHH
Q 003029 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS-----------SFLHYLRMKMCMRFLS 838 (856)
Q Consensus 770 G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~-----------~~~~~l~~~~~~~~~l 838 (856)
..++..++++++ .+++.++.||| +.+|.++ .+.++-. +|.|.. .+.|.+.++.++..+|
T Consensus 152 ~~~~~~~~~~~~------~~~~~~i~igD-~~~Di~~-a~~~g~~--~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l 221 (226)
T PRK13222 152 PAPLLLACEKLG------LDPEEMLFVGD-SRNDIQA-ARAAGCP--SVGVTYGYNYGEPIALSEPDVVIDHFAELLPLL 221 (226)
T ss_pred hHHHHHHHHHcC------CChhheEEECC-CHHHHHH-HHHCCCc--EEEECcCCCCccchhhcCCCEEECCHHHHHHHH
Confidence 567888888887 56789999999 9999999 6665433 444421 1228899999988877
Q ss_pred HH
Q 003029 839 QN 840 (856)
Q Consensus 839 ~~ 840 (856)
++
T Consensus 222 ~~ 223 (226)
T PRK13222 222 GL 223 (226)
T ss_pred HH
Confidence 54
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=90.66 E-value=0.32 Score=51.15 Aligned_cols=62 Identities=8% Similarity=-0.109 Sum_probs=42.3
Q ss_pred HHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcce--EEeCCC------Cc-cccCCHHHHHHHHHH
Q 003029 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIST--VRLDSS------FL-HYLRMKMCMRFLSQN 840 (856)
Q Consensus 770 G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~--v~V~~~------~~-~~l~~~~~~~~~l~~ 840 (856)
-....+++++++ .+++.+++||| ..+|... +...|+. +.|.+. .+ ..+++..++..+|+.
T Consensus 152 p~~~~~~~~~~~------~~p~~~l~igD-s~~di~a----A~~aG~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (224)
T PRK14988 152 QRLWQAVAEHTG------LKAERTLFIDD-SEPILDA----AAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPS 220 (224)
T ss_pred HHHHHHHHHHcC------CChHHEEEEcC-CHHHHHH----HHHcCCeEEEEEeCCCCCccchhccCCCcHHHHHHHhhh
Confidence 455677778887 56889999999 8887444 6666653 456331 12 566888888888776
Q ss_pred HH
Q 003029 841 YL 842 (856)
Q Consensus 841 ~~ 842 (856)
+.
T Consensus 221 l~ 222 (224)
T PRK14988 221 LM 222 (224)
T ss_pred hc
Confidence 53
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=90.16 E-value=0.72 Score=47.20 Aligned_cols=40 Identities=18% Similarity=0.362 Sum_probs=35.0
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
.+-+.+.++|+.|.+ .|+.++|+||-...........+++
T Consensus 127 ~~~~~~~~~l~~L~~-~Gi~~~i~TGD~~~~a~~~~~~lgi 166 (215)
T PF00702_consen 127 PLRPGAKEALQELKE-AGIKVAILTGDNESTASAIAKQLGI 166 (215)
T ss_dssp EBHTTHHHHHHHHHH-TTEEEEEEESSEHHHHHHHHHHTTS
T ss_pred cchhhhhhhhhhhhc-cCcceeeeecccccccccccccccc
Confidence 466789999999987 6999999999999999888888776
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=90.14 E-value=0.34 Score=52.13 Aligned_cols=70 Identities=14% Similarity=0.157 Sum_probs=46.1
Q ss_pred CCeEEEEecCCccCCCCCCCCC--CC------cccc-----ccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHH
Q 003029 590 NNRLLILGFNATLTEPVDTPGR--RG------DQIR-----EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 656 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~--~~------~~~~-----~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~ 656 (856)
.+-+++||+|+|++++.+--+. .+ .... ...+++-|.+++..+.|.+ .|.+|+++|||+-..-...
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~-~G~kIf~VSgR~e~~r~aT 178 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVS-LGFKIIFLSGRLKDKQAVT 178 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHH-CCCEEEEEeCCchhHHHHH
Confidence 3568999999999965321000 00 0011 1245667789999999986 7999999999987654444
Q ss_pred hccc
Q 003029 657 FQEY 660 (856)
Q Consensus 657 ~~~l 660 (856)
..++
T Consensus 179 ~~NL 182 (275)
T TIGR01680 179 EANL 182 (275)
T ss_pred HHHH
Confidence 4444
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.11 E-value=3.7 Score=48.98 Aligned_cols=169 Identities=14% Similarity=0.089 Sum_probs=87.8
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeCceEEEecCCeeeecccccCChHHHHHHHHHHHH
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEY 701 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~ 701 (856)
++.+.++-.|+-|.+ .|++||..||-..+... .||-+-..+.. +...+.+. +..-+..+..-++.
T Consensus 658 kLQ~dVk~tLElLRN-AgikiWMLTGDKlETA~---------ciAkSs~L~sR-~q~ihv~~----~v~sr~dah~eL~~ 722 (1051)
T KOG0210|consen 658 KLQDDVKPTLELLRN-AGIKIWMLTGDKLETAI---------CIAKSSRLFSR-GQYIHVIR----SVTSRGDAHNELNN 722 (1051)
T ss_pred HHhhhhHhHHHHHhh-cCcEEEEEcCcchhhee---------eeehhccceec-CceEEEEE----ecCCchHHHHHHHH
Confidence 466778888888885 79999999998766542 23322222221 11111111 11124555555666
Q ss_pred HHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhC
Q 003029 702 FTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIV 781 (856)
Q Consensus 702 ~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~ 781 (856)
+...+..+.+-. +.++ ++ ..+-+.+++ -++....+ ..|=+|..-.-|+..+..|-++-+
T Consensus 723 lR~k~~~aLvi~-G~Sl---------~~---cl~yye~Ef-~el~~~~~-------aVv~CRctPtQKA~v~~llq~~t~ 781 (1051)
T KOG0210|consen 723 LRRKTDCALVID-GESL---------EF---CLKYYEDEF-IELVCELP-------AVVCCRCTPTQKAQVVRLLQKKTG 781 (1051)
T ss_pred hhcCCCcEEEEc-CchH---------HH---HHHHHHHHH-HHHHHhcC-------cEEEEecChhHHHHHHHHHHHhhC
Confidence 654333333221 1111 11 111111111 11111111 123335445568777766555533
Q ss_pred cCCcCCCCcceEEEEecCCcccccccccccccCcceEE--eCCC---Cc-cccCCHHHHHHHH
Q 003029 782 HSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVR--LDSS---FL-HYLRMKMCMRFLS 838 (856)
Q Consensus 782 ~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~--V~~~---~~-~~l~~~~~~~~~l 838 (856)
..|.|||| +.||..| +++++ .|++|- -|+. +| |.+..-.++.++|
T Consensus 782 ---------krvc~IGD-GGNDVsM-Iq~A~-~GiGI~gkEGkQASLAADfSItqF~Hv~rLL 832 (1051)
T KOG0210|consen 782 ---------KRVCAIGD-GGNDVSM-IQAAD-VGIGIVGKEGKQASLAADFSITQFSHVSRLL 832 (1051)
T ss_pred ---------ceEEEEcC-CCccchh-eeecc-cceeeecccccccchhccccHHHHHHHHHHh
Confidence 57999999 9999999 98874 333331 1222 23 8877777777765
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=89.84 E-value=0.85 Score=54.78 Aligned_cols=66 Identities=17% Similarity=0.323 Sum_probs=52.1
Q ss_pred HHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCC-CeEEEEcCCCHhhHHHHhcccCc
Q 003029 585 RYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPK-TTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 585 ~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g-~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
.+.....+.+++..||+++..-. ....+-|.+.++|++|.+ .| ++++|+||.+....+...+++++
T Consensus 358 ~~~~~g~~~~~v~~~~~~~g~i~-----------~~d~~~~g~~e~l~~L~~-~g~i~v~ivTgd~~~~a~~i~~~lgi 424 (556)
T TIGR01525 358 EGESQGKTVVFVAVDGELLGVIA-----------LRDQLRPEAKEAIAALKR-AGGIKLVMLTGDNRSAAEAVAAELGI 424 (556)
T ss_pred HHhhCCcEEEEEEECCEEEEEEE-----------ecccchHhHHHHHHHHHH-cCCCeEEEEeCCCHHHHHHHHHHhCC
Confidence 44555678899999998875421 134578899999999986 68 99999999999999888877654
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=89.74 E-value=0.77 Score=47.86 Aligned_cols=38 Identities=16% Similarity=0.284 Sum_probs=31.1
Q ss_pred CCChhHHHHHH-HhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 622 KLHPDLKQPLN-ALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 622 ~~s~~~~~~L~-~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
.+-|.+++.|+ .+.+ .|..++|+|+.+...++++....
T Consensus 94 ~l~pga~e~L~~~l~~-~G~~v~IvSas~~~~~~~ia~~~ 132 (210)
T TIGR01545 94 TAFPLVAERLRQYLES-SDADIWLITGSPQPLVEAVYFDS 132 (210)
T ss_pred CCCccHHHHHHHHHHh-CCCEEEEEcCCcHHHHHHHHHhc
Confidence 45688999996 6664 69999999999999998888663
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=89.67 E-value=0.61 Score=51.85 Aligned_cols=65 Identities=22% Similarity=0.245 Sum_probs=48.4
Q ss_pred CCeEEEEecCCccCCCCC-CCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcc
Q 003029 590 NNRLLILGFNATLTEPVD-TPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~-~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 659 (856)
.+|+|++|+|+||..-+- +-|..+-+ ...+.+.+.+.|++|.+ +|+.++|+|..+...+...+..
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~----~~~~~~~~~e~L~~L~~-~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLN----LSPLHKTLQEKIKTLKK-QGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccc----cCccHHHHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHh
Confidence 368999999999997530 00100000 12345789999999986 7999999999999999998887
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=89.30 E-value=12 Score=42.60 Aligned_cols=99 Identities=11% Similarity=0.085 Sum_probs=62.1
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchh----hc-c-CCeEEECC--CCHH
Q 003029 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ----SL-G-AGAILVNP--WNIT 515 (856)
Q Consensus 444 ~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~----~l-g-~~g~lVnP--~d~~ 515 (856)
+.+.+++. .++..||++|..+ |.| +..|+++++ .|+|+.-..+--. .+ . ..|..++. .+.+
T Consensus 279 ~~~~~p~~---~ll~~~~~~I~hg---G~~-t~~Eal~~G----~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~ 347 (392)
T TIGR01426 279 VRQWVPQL---EILKKADAFITHG---GMN-STMEALFNG----VPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAE 347 (392)
T ss_pred EeCCCCHH---HHHhhCCEEEECC---Cch-HHHHHHHhC----CCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHH
Confidence 46778865 5678999988654 655 679999994 7777755443221 12 1 23566654 4689
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-cCHHHHHHHH
Q 003029 516 EVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETF 555 (856)
Q Consensus 516 ~lA~ai~~aL~~~~~er~~r~~~~~~~v~~-~~~~~W~~~f 555 (856)
+++++|.++|.++ +.+++.+++.+.+.. ......++.+
T Consensus 348 ~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~~i 386 (392)
T TIGR01426 348 KLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAADEI 386 (392)
T ss_pred HHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999864 344444555554443 3445555433
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=89.19 E-value=0.75 Score=46.15 Aligned_cols=37 Identities=16% Similarity=0.238 Sum_probs=29.0
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCccccccccccc
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFL 811 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~ 811 (856)
+.|..|+..++++++.. ++.++++|| +.||..| -+.+
T Consensus 145 ~~g~~K~~~~~~~~~~~---------~~~~i~iGD-~~~D~~a-a~~~ 181 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPK---------YQHIIYIGD-GVTDVCP-AKLS 181 (188)
T ss_pred CCCCCHHHHHHHHHhhc---------CceEEEECC-Ccchhch-HhcC
Confidence 56778999888887642 467999999 9999888 5544
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.80 E-value=0.47 Score=51.30 Aligned_cols=47 Identities=11% Similarity=0.192 Sum_probs=37.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhh
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~ 652 (856)
+++.++||+||||... .++-|...++|++|.+ .|..++++|-.+...
T Consensus 7 ~y~~~l~DlDGvl~~G---------------~~~ipga~e~l~~L~~-~g~~~iflTNn~~~s 53 (269)
T COG0647 7 KYDGFLFDLDGVLYRG---------------NEAIPGAAEALKRLKA-AGKPVIFLTNNSTRS 53 (269)
T ss_pred hcCEEEEcCcCceEeC---------------CccCchHHHHHHHHHH-cCCeEEEEeCCCCCC
Confidence 4677999999999965 2355789999999997 799999998665543
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=88.46 E-value=0.91 Score=53.33 Aligned_cols=47 Identities=17% Similarity=0.178 Sum_probs=38.5
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc--eEEeeCc
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAENG 669 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--gliaenG 669 (856)
+..+.+++.|+++.+ .|.+++|+|+.+...++...+++++ .+++.++
T Consensus 72 p~~pga~e~L~~lk~-~G~~v~LaTas~~~~a~~i~~~lGlFd~Vigsd~ 120 (479)
T PRK08238 72 PYNEEVLDYLRAERA-AGRKLVLATASDERLAQAVAAHLGLFDGVFASDG 120 (479)
T ss_pred CCChhHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCEEEeCCC
Confidence 356889999999986 7999999999999999988888763 4555544
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.21 E-value=0.89 Score=47.76 Aligned_cols=39 Identities=21% Similarity=0.236 Sum_probs=29.5
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
.+-+-+.+.|..|.+ .|+.++++|+.+...++..+..++
T Consensus 86 ~~~pGv~~~l~~L~~-~~i~~avaS~s~~~~~~~~L~~~g 124 (221)
T COG0637 86 KPIPGVVELLEQLKA-RGIPLAVASSSPRRAAERVLARLG 124 (221)
T ss_pred CCCccHHHHHHHHHh-cCCcEEEecCChHHHHHHHHHHcc
Confidence 455667888888875 578888888888888777776654
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=88.05 E-value=1.1 Score=46.77 Aligned_cols=39 Identities=8% Similarity=0.089 Sum_probs=31.4
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 621 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
..+.|.+.+.|+.|.+ .|+.++|+||.....++.++..+
T Consensus 69 ~~l~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 107 (214)
T TIGR03333 69 AEIREGFREFVAFINE-HGIPFYVISGGMDFFVYPLLEGI 107 (214)
T ss_pred CcccccHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHhh
Confidence 3566778888888875 68999999999888888887765
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.61 E-value=0.021 Score=69.46 Aligned_cols=251 Identities=12% Similarity=0.071 Sum_probs=132.9
Q ss_pred CcchHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhh---
Q 003029 576 SLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV--- 652 (856)
Q Consensus 576 ~l~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~--- 652 (856)
.++..++.+..-.-+.-|.++|+||||-.+..++. .+.++..+..+-.+..+ .-.-.++|||.+..
T Consensus 174 pfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~a---------rhFls~c~R~l~~~~~s--~~~~~~v~~rgr~~~v~ 242 (732)
T KOG1050|consen 174 PFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYA---------RHFLSTCSRLLGLEVAS--KFPTAGVSGRGRDVSVK 242 (732)
T ss_pred CCChHHHHHhcccHHHHHHhhhccCccccccccHH---------HHHHHHHHHHHHhhhhc--cCCcceEEeccceeeee
Confidence 34445555444444555889999999999877762 45566555555555543 23345589998665
Q ss_pred -------HHHHhcccCceEEeeCceEEEec--CCeeeecccccC-----ChHHHHHHHHHHHHHHhcCCCcE--------
Q 003029 653 -------LDKNFQEYNLWLAAENGMFLRCT--TGKWMTTMPEHL-----NMEWVDSLKHVFEYFTERTPRSH-------- 710 (856)
Q Consensus 653 -------l~~~~~~l~lgliaenG~~i~~~--~~~w~~~~~~~~-----~~~w~~~v~~i~~~~~~rt~gs~-------- 710 (856)
.....+..+++.++++|..++.. ++.-..-. +.+ ...+.....+.++.|.+-.+...
T Consensus 243 ~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgv-D~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~ 321 (732)
T KOG1050|consen 243 ALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGV-DRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPK 321 (732)
T ss_pred ecccccchHHhhccccchhHHHHHHHHhhhccCCceEecc-cccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCC
Confidence 66666666888999999988742 22110000 111 12344455555555533211111
Q ss_pred ------EeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCC-CCeEEEEcCcEEEEEe-CCCCHHHHHHHHHHHhCc
Q 003029 711 ------FEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN-ASVEVVQGSKSVEVRA-VGVTKGAAIDRILAEIVH 782 (856)
Q Consensus 711 ------ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~-~~v~v~~g~~~vEV~p-~gvnKG~av~~ll~~l~~ 782 (856)
+++-..++..||+..+.+|+...+..+ ..+... ...+...+....|+++ ..+.||.++..+...++.
T Consensus 322 ~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV-----~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~ 396 (732)
T KOG1050|consen 322 RTDGKEVEELKFCVSVHVRRINEKFGSASYQPV-----HSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQ 396 (732)
T ss_pred cccchHHHHHHHHhHhhhhhhhhccCCcccceE-----EEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhh
Confidence 111112222222222222211110000 000000 0112233445789997 569999999998887763
Q ss_pred CCcCCCCcceEEEEecCCcccccccccccccC-c--ceEEeCC---C--CccccCCHHHHHH-HHHHHHHHHH
Q 003029 783 SKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQT-I--STVRLDS---S--FLHYLRMKMCMRF-LSQNYLMMAR 846 (856)
Q Consensus 783 ~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~-~--~~v~V~~---~--~~~~l~~~~~~~~-~l~~~~~~~~ 846 (856)
.. .+.+.=...++|| +.+|++- +..++++ . ++..|.. . ..+.++++..+.. .++.+..-++
T Consensus 397 ~~-~~~~lVlsef~G~-~~tl~d~-aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~ 466 (732)
T KOG1050|consen 397 EN-KKSVLVLSEFIGD-DTTLEDA-AIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAK 466 (732)
T ss_pred cc-cCCceEEeeeccc-ccccccc-CEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHH
Confidence 21 0011224578999 9999999 9999887 2 4444432 1 2266666666655 4444444443
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=87.53 E-value=1.2 Score=50.67 Aligned_cols=23 Identities=9% Similarity=0.065 Sum_probs=17.8
Q ss_pred HHHHhcCCeEEEEecCCccCCCC
Q 003029 584 ERYLRSNNRLLILGFNATLTEPV 606 (856)
Q Consensus 584 ~~y~~s~~rLI~lD~DGTL~~~~ 606 (856)
..-..+..+.|+||+||||+++.
T Consensus 124 ~~~~~~~~~~VIFDlDGTLIDS~ 146 (381)
T PLN02575 124 QERMGCGWLGAIFEWEGVIIEDN 146 (381)
T ss_pred HHhccCCCCEEEEcCcCcceeCH
Confidence 33334678999999999999864
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.45 E-value=0.93 Score=47.72 Aligned_cols=61 Identities=5% Similarity=-0.159 Sum_probs=41.0
Q ss_pred HHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC----------CccccCCHHHHHHHHH
Q 003029 771 AAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS----------FLHYLRMKMCMRFLSQ 839 (856)
Q Consensus 771 ~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~----------~~~~l~~~~~~~~~l~ 839 (856)
..+.++++++| ++++++++||| +.+|+.+ -+.++-..+.|.-+.. +.|.+.++.++...|+
T Consensus 155 ~~~~~~~~~l~------~~p~~~l~IGD-s~~Di~a-A~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~~ 225 (229)
T PRK13226 155 LPLLVAAERIG------VAPTDCVYVGD-DERDILA-ARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPAT 225 (229)
T ss_pred HHHHHHHHHhC------CChhhEEEeCC-CHHHHHH-HHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHhc
Confidence 45667788888 56899999999 9999888 5555433333322211 1288888888877664
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=86.90 E-value=1.2 Score=49.73 Aligned_cols=52 Identities=13% Similarity=0.131 Sum_probs=37.1
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCC----CCeEEEEc---CCCHhhHHHHh-ccc
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDP----KTTIVVLS---GSDRNVLDKNF-QEY 660 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~----g~~V~I~S---GR~~~~l~~~~-~~l 660 (856)
.|+||+||||.... .+-+...++|+.|.. . |..++++| |++.......+ ..+
T Consensus 2 ~~ifD~DGvL~~g~---------------~~i~ga~eal~~L~~-~~~~~g~~~~flTNn~g~s~~~~~~~l~~~l 61 (321)
T TIGR01456 2 GFAFDIDGVLFRGK---------------KPIAGASDALRRLNR-NQGQLKIPYIFLTNGGGFSERARAEEISSLL 61 (321)
T ss_pred EEEEeCcCceECCc---------------cccHHHHHHHHHHhc-cccccCCCEEEEecCCCCCHHHHHHHHHHHc
Confidence 48999999999762 356889999999985 5 67777666 56666644443 443
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.58 E-value=11 Score=41.35 Aligned_cols=124 Identities=18% Similarity=0.153 Sum_probs=82.5
Q ss_pred ceEEEee-cccccCChHHHHHHHHHHHHhCcCccCceEEEEE-EcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003029 364 KVMLGVD-RLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQI-AVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (856)
Q Consensus 364 ~iIl~V~-Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v-~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (856)
++.+-|| .=|++-.+.+.|+++.+++.+ ++.++.- +.|+ + .+ ++.++|.+...+ .||.. .+
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~------~v~ii~PlsYp~-g-n~---~Yi~~V~~~~~~---lF~~~---~~ 208 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGD------NVKIIVPMGYPA-N-NQ---AYIEEVRQAGLA---LFGAE---NF 208 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCC------CeEEEEECCcCC-C-CH---HHHHHHHHHHHH---hcCcc---cE
Confidence 4444454 678999999999998877543 2334322 2232 2 23 445666666554 35521 46
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCC-CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhccCCeEEE
Q 003029 442 HHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILV 509 (856)
Q Consensus 442 ~~~~g~v~~~el~aly~~ADv~v~~S~-~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~~g~lV 509 (856)
..++..++.+|+.++++.+|+.++.-- ..|+|..++=- .. |.|+++|+-.-.-..+...|+-|
T Consensus 209 ~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi-~~----G~~v~l~r~n~fwqdl~e~gv~V 272 (322)
T PRK02797 209 QILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLI-QL----GKPVVLSRDNPFWQDLTEQGLPV 272 (322)
T ss_pred EehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHH-HC----CCcEEEecCCchHHHHHhCCCeE
Confidence 667899999999999999999999876 59999877643 33 47888887776666663444444
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=86.53 E-value=4.8 Score=43.84 Aligned_cols=98 Identities=12% Similarity=0.048 Sum_probs=61.4
Q ss_pred CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003029 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (856)
.+++++..|-.|+.+.....++|+..+. +++ .+..|.++.. +.++ ++++++.. + + .+
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~----~i~vv~G~~~---~~~~----~l~~~~~~-~---~-----~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAESQ---INI----SITLVTGSSN---PNLD----ELKKFAKE-Y---P-----NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhccc---cCc----eEEEEECCCC---cCHH----HHHHHHHh-C---C-----CE
Confidence 3578999999999887777788876542 222 2333444432 2222 33444332 1 1 23
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeC
Q 003029 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE 494 (856)
Q Consensus 442 ~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe 494 (856)
.. .++ .+++..++..||+++.+ -|.++.|+++|+ .|.|+-.
T Consensus 227 ~~-~~~--~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g----~P~i~i~ 267 (279)
T TIGR03590 227 IL-FID--VENMAELMNEADLAIGA-----AGSTSWERCCLG----LPSLAIC 267 (279)
T ss_pred EE-EeC--HHHHHHHHHHCCEEEEC-----CchHHHHHHHcC----CCEEEEE
Confidence 32 333 36899999999999984 458999999994 5655443
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=86.10 E-value=0.71 Score=45.54 Aligned_cols=67 Identities=18% Similarity=0.265 Sum_probs=41.8
Q ss_pred eEEEEecCCccCCCCCCCCCCCcc-----ccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQ-----IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~-----~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
|+++||+||||+.....+....+. .....-.+-|.+.+.|+.|++ ...|+|.|..+.......+..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHhh
Confidence 689999999999765322100000 000112244678888998864 6899999999998888888776
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=86.09 E-value=1.4 Score=44.41 Aligned_cols=72 Identities=19% Similarity=0.271 Sum_probs=38.3
Q ss_pred CeEEEEecCCccCCCCCC-----CCCC-Ccc-----ccccccCCChhHHHHHHHhhcCCCCeEEEEcCC-CHhhHHHHhc
Q 003029 591 NRLLILGFNATLTEPVDT-----PGRR-GDQ-----IREMELKLHPDLKQPLNALCHDPKTTIVVLSGS-DRNVLDKNFQ 658 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~-----p~~~-~~~-----~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR-~~~~l~~~~~ 658 (856)
-|||+||+|+||-+..-+ |-.. ... .....-.+-|.+.++|++|.+ .|+.+++||-- ..+...+.++
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~-~gv~lavASRt~~P~~A~~~L~ 81 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKE-RGVKLAVASRTDEPDWARELLK 81 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHH-CT--EEEEE--S-HHHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHH-CCCEEEEEECCCChHHHHHHHH
Confidence 479999999999985321 1000 000 011234567889999999986 79999999953 3455666666
Q ss_pred ccCce
Q 003029 659 EYNLW 663 (856)
Q Consensus 659 ~l~lg 663 (856)
.+++.
T Consensus 82 ~l~i~ 86 (169)
T PF12689_consen 82 LLEID 86 (169)
T ss_dssp HTT-C
T ss_pred hcCCC
Confidence 66543
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=86.06 E-value=3.2 Score=49.67 Aligned_cols=64 Identities=16% Similarity=0.242 Sum_probs=48.7
Q ss_pred HhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCC-eEEEEcCCCHhhHHHHhcccCc
Q 003029 587 LRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKT-TIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 587 ~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~-~V~I~SGR~~~~l~~~~~~l~l 662 (856)
.....+.+++-.||++...-. ....+-+.+.++|++|.+ .|. +++|+||.+....+...+.+++
T Consensus 338 ~~~~~~~~~v~~~~~~~g~i~-----------~~d~l~~~~~e~i~~L~~-~Gi~~v~vvTgd~~~~a~~i~~~lgi 402 (536)
T TIGR01512 338 ESAGKTIVHVARDGTYLGYIL-----------LSDEPRPDAAEAIAELKA-LGIEKVVMLTGDRRAVAERVARELGI 402 (536)
T ss_pred hhCCCeEEEEEECCEEEEEEE-----------EeccchHHHHHHHHHHHH-cCCCcEEEEcCCCHHHHHHHHHHcCC
Confidence 334456677778888765421 234577899999999986 799 9999999999999888887664
|
. |
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=85.91 E-value=4.6 Score=45.25 Aligned_cols=117 Identities=15% Similarity=0.223 Sum_probs=81.5
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCC---CcCC---ChhHHHHHhhcCCCCceEEEeCCCCchhhccCCeEEECCCCH
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSL---RDGM---NLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNI 514 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~---~EG~---~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~ 514 (856)
+.++....+.......|+.-|+++.=+. -++. +.-..|+++|+ |++|.+-..++-..++.+--++--.|.
T Consensus 239 ~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~----~~liT~~~~~~e~~f~pgk~~iv~~d~ 314 (373)
T COG4641 239 VQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCG----GFLITDYWKDLEKFFKPGKDIIVYQDS 314 (373)
T ss_pred hhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcC----CccccccHHHHHHhcCCchheEEecCH
Confidence 3443333344777777788887775443 2333 88899999994 777777777766666544333335799
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHh
Q 003029 515 TEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 515 ~~lA~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~ 562 (856)
.++.+++..++.-+ +||++..+.+++.| ..|+-..=+..++..+...
T Consensus 315 kdl~~~~~yll~h~-~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI 362 (373)
T COG4641 315 KDLKEKLKYLLNHP-DERKEIAECAYERVLARHTYEERIFKLLNEIASI 362 (373)
T ss_pred HHHHHHHHHHhcCc-chHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHH
Confidence 99999999999865 48889888887776 5577666666677766653
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=85.71 E-value=1.1 Score=46.34 Aligned_cols=39 Identities=13% Similarity=0.058 Sum_probs=30.2
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
.+.|.+.+.|+.|.+ .+ .++|+||-....+++++..+++
T Consensus 68 ~l~pga~ell~~lk~-~~-~~~IVS~~~~~~~~~il~~lgi 106 (203)
T TIGR02137 68 KPLEGAVEFVDWLRE-RF-QVVILSDTFYEFSQPLMRQLGF 106 (203)
T ss_pred CCCccHHHHHHHHHh-CC-eEEEEeCChHHHHHHHHHHcCC
Confidence 567788888888876 34 8888888888888887777654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=85.31 E-value=1.4 Score=50.33 Aligned_cols=36 Identities=17% Similarity=0.232 Sum_probs=29.7
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhc
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 658 (856)
.+-+.+.+.|+.|.+ .|+.++|+|+.+...+...+.
T Consensus 93 ~l~pGv~elL~~Lk~-~g~~l~IvTn~~~~~~~~~l~ 128 (382)
T PLN02940 93 KALPGANRLIKHLKS-HGVPMALASNSPRANIEAKIS 128 (382)
T ss_pred CCCcCHHHHHHHHHH-CCCcEEEEeCCcHHHHHHHHH
Confidence 345677889999986 699999999999988877665
|
|
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=85.15 E-value=1.7 Score=43.20 Aligned_cols=72 Identities=18% Similarity=0.120 Sum_probs=51.1
Q ss_pred hcCCeEEEEecCCccCCCCCCCCCCCccc---------------------cccccCCChhHHHHHHHhhcCCCCeEEEEc
Q 003029 588 RSNNRLLILGFNATLTEPVDTPGRRGDQI---------------------REMELKLHPDLKQPLNALCHDPKTTIVVLS 646 (856)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~~~p~~~~~~~---------------------~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S 646 (856)
.+++..+++|+|.||+.....|....... .....++-|.+.+.|++|++ +..++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~--~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASK--LYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHh--hcEEEEEe
Confidence 35677899999999998765442110000 00122345789999999984 69999999
Q ss_pred CCCHhhHHHHhcccC
Q 003029 647 GSDRNVLDKNFQEYN 661 (856)
Q Consensus 647 GR~~~~l~~~~~~l~ 661 (856)
..+...+...++.++
T Consensus 81 ~~~~~yA~~vl~~ld 95 (156)
T TIGR02250 81 MGTRAYAQAIAKLID 95 (156)
T ss_pred CCcHHHHHHHHHHhC
Confidence 999999998888873
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=84.45 E-value=0.85 Score=46.64 Aligned_cols=49 Identities=18% Similarity=0.160 Sum_probs=39.0
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
..+-.|..+++.++++.+ ++++.++++|| +.+|.+| ++.+ +..+.|.++
T Consensus 151 ~~g~~K~~~l~~~~~~~~------~~~~~~~~~gD-s~~D~~~-~~~a---~~~~~v~~~ 199 (202)
T TIGR01490 151 CKGEGKVHALAELLAEEQ------IDLKDSYAYGD-SISDLPL-LSLV---GHPYVVNPD 199 (202)
T ss_pred CCChHHHHHHHHHHHHcC------CCHHHcEeeeC-CcccHHH-HHhC---CCcEEeCCC
Confidence 456789999999999887 56789999999 9999999 7766 455555544
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=84.07 E-value=2.8 Score=52.94 Aligned_cols=69 Identities=14% Similarity=0.202 Sum_probs=50.1
Q ss_pred HHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 582 SIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 582 ~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
....+.....+++++-+||+++-.-. ....+-+...++|++|.+ .|++++++||......+...+.++
T Consensus 621 ~~~~~~~~g~~~v~va~~~~~~g~~~-----------l~d~~r~~a~~~i~~L~~-~gi~v~~~Tgd~~~~a~~ia~~lg 688 (834)
T PRK10671 621 EITAQASQGATPVLLAVDGKAAALLA-----------IRDPLRSDSVAALQRLHK-AGYRLVMLTGDNPTTANAIAKEAG 688 (834)
T ss_pred HHHHHHhCCCeEEEEEECCEEEEEEE-----------ccCcchhhHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcC
Confidence 34455556678888889998763211 122356778899999975 699999999999988887777655
Q ss_pred c
Q 003029 662 L 662 (856)
Q Consensus 662 l 662 (856)
+
T Consensus 689 i 689 (834)
T PRK10671 689 I 689 (834)
T ss_pred C
Confidence 3
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=83.92 E-value=84 Score=35.75 Aligned_cols=136 Identities=18% Similarity=0.242 Sum_probs=84.7
Q ss_pred CceEEEeeccccc-CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003029 363 RKVMLGVDRLDMI-KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (856)
Q Consensus 363 ~~iIl~V~Rld~~-KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (856)
+.+++..=|-.-. +++...+.|+.++.+++|+.. ++ .|..-. +.. ++.+ +.+++.. ..|
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----vi---yp~H~~-~~v-------~e~~---~~~L~~~--~~v 264 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VI---YPVHPR-PRV-------RELV---LKRLKNV--ERV 264 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EE---EeCCCC-hhh-------hHHH---HHHhCCC--CcE
Confidence 3455556676655 999999999999999998753 22 222111 222 2222 1112221 124
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCce-EEEeCCCCchhhccCC-eEEECCCCHHHHHH
Q 003029 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV-LILSEFAGAAQSLGAG-AILVNPWNITEVAN 519 (856)
Q Consensus 442 ~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~-lVlSe~aG~~~~lg~~-g~lVnP~d~~~lA~ 519 (856)
+ +..++...+...|+..|-+.+--| |=..-||-.-+ .| +++-+.+-=++.+..+ -++|+ .|.+.+.+
T Consensus 265 ~-li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg----~Pvl~lR~~TERPE~v~agt~~lvg-~~~~~i~~ 333 (383)
T COG0381 265 K-LIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLG----KPVLVLRDTTERPEGVEAGTNILVG-TDEENILD 333 (383)
T ss_pred E-EeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcC----CcEEeeccCCCCccceecCceEEeC-ccHHHHHH
Confidence 4 567889999999999997666555 33466887773 33 3344444444444233 45554 57899999
Q ss_pred HHHHHHcCCH
Q 003029 520 AIARALNMSP 529 (856)
Q Consensus 520 ai~~aL~~~~ 529 (856)
++.++++++.
T Consensus 334 ~~~~ll~~~~ 343 (383)
T COG0381 334 AATELLEDEE 343 (383)
T ss_pred HHHHHhhChH
Confidence 9999998754
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.78 E-value=1.1 Score=45.43 Aligned_cols=51 Identities=16% Similarity=0.244 Sum_probs=38.6
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccc-cccCCChhHHHHHHHhhcCCCCeEEEEcCC
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIRE-MELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~-~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR 648 (856)
.++||+|-||||..+.++ +++. .+-...+.++++|.+|.+ .|..++|+|--
T Consensus 5 ~k~lflDRDGtin~d~~~------yv~~~~~~~~~~g~i~al~~l~~-~gy~lVvvTNQ 56 (181)
T COG0241 5 QKALFLDRDGTINIDKGD------YVDSLDDFQFIPGVIPALLKLQR-AGYKLVVVTNQ 56 (181)
T ss_pred CcEEEEcCCCceecCCCc------ccCcHHHhccCccHHHHHHHHHh-CCCeEEEEECC
Confidence 578999999999876431 2211 244677889999999985 79999999863
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=83.17 E-value=3.8 Score=44.24 Aligned_cols=61 Identities=16% Similarity=0.265 Sum_probs=48.0
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
...+|+||+|-||..+... ...+.|.+.+.|.+|.+ .|..+++=|--+.+-+...+..+++
T Consensus 121 ~phVIVfDlD~TLItd~~~-----------v~Ir~~~v~~sL~~Lk~-~g~vLvLWSyG~~eHV~~sl~~~~L 181 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDEGD-----------VRIRDPAVYDSLRELKE-QGCVLVLWSYGNREHVRHSLKELKL 181 (297)
T ss_pred CCcEEEEECCCcccccCCc-----------cccCChHHHHHHHHHHH-cCCEEEEecCCCHHHHHHHHHHhCC
Confidence 3468999999999987531 23457899999999997 6888888888788888777777653
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=83.16 E-value=0.66 Score=46.79 Aligned_cols=42 Identities=5% Similarity=-0.114 Sum_probs=30.7
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCc-ceEEe
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTI-STVRL 820 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~-~~v~V 820 (856)
-+-..+.+++++++ .+++.+++||| ...|.+. +...| -+|.|
T Consensus 143 P~p~~~~~~~~~~~------~~~~~~l~igD-s~~di~a----A~~aG~~~i~~ 185 (188)
T PRK10725 143 PAPDTFLRCAQLMG------VQPTQCVVFED-ADFGIQA----ARAAGMDAVDV 185 (188)
T ss_pred CChHHHHHHHHHcC------CCHHHeEEEec-cHhhHHH----HHHCCCEEEee
Confidence 45567899999998 56789999999 8888555 55554 34444
|
|
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=82.02 E-value=64 Score=39.69 Aligned_cols=149 Identities=15% Similarity=0.146 Sum_probs=87.4
Q ss_pred CCceEEEeecccccCChHHH-H---HHHHHHHHhCcCcc-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCC
Q 003029 362 GRKVMLGVDRLDMIKGIPQK-L---LAFEKFLEENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 436 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~~-L---~Af~~~l~~~P~~~-~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~ 436 (856)
+.-++++|-|+..-|--... | .-+.++ ...|+.. ..+++|..|-...++.. -+++-+.+.+++..||..=...
T Consensus 443 ~slfdv~~rR~heYKRq~LniL~ii~~y~ri-k~~p~~~~~Pv~~IFaGKAhP~d~~-gK~iIk~I~~va~~in~Dp~v~ 520 (713)
T PF00343_consen 443 DSLFDVQARRFHEYKRQLLNILHIIDRYNRI-KNNPNKKIRPVQFIFAGKAHPGDYM-GKEIIKLINNVAEVINNDPEVG 520 (713)
T ss_dssp TSEEEEEES-SCCCCTHHHHHHHHHHHHHHH-HHSTTSCCS-EEEEEE----TT-HH-HHHHHHHHHHHHHHHCT-TTTC
T ss_pred chhhhhhhhhcccccccCcccccHHHHHHHH-HhcccCCCCCeEEEEeccCCCCcHH-HHHHHHHHHHHHHHHhcChhhc
Confidence 45577899999999986663 3 334444 3456432 23566655543333322 2456667777777777631111
Q ss_pred CcccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc----c-CCeEEE
Q 003029 437 TAVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILV 509 (856)
Q Consensus 437 ~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l----g-~~g~lV 509 (856)
+.-.|+|+. ..+-.--..++.+|||.+-+|+ .|.-|..-+=||.- |++.+|..-|+.-++ | ++.+++
T Consensus 521 ~~lkVvFle-nYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~N-----GaL~lstlDG~niEi~e~vG~eN~fiF 594 (713)
T PF00343_consen 521 DRLKVVFLE-NYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMN-----GALNLSTLDGWNIEIAEAVGEENIFIF 594 (713)
T ss_dssp CGEEEEEET-T-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHT-----T-EEEEESSTCHHHHHHHH-GGGSEEE
T ss_pred cceeEEeec-CCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcC-----CCeEEecccchhHHHHHhcCCCcEEEc
Confidence 223578755 4566677788999999999998 59999998888885 899999999986655 5 467777
Q ss_pred CCCCHHHHHH
Q 003029 510 NPWNITEVAN 519 (856)
Q Consensus 510 nP~d~~~lA~ 519 (856)
-.+.+++.+
T Consensus 595 -G~~~~ev~~ 603 (713)
T PF00343_consen 595 -GLTAEEVEE 603 (713)
T ss_dssp -S-BHHHHHH
T ss_pred -CCCHHHHHH
Confidence 345666544
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=81.32 E-value=1.4 Score=44.93 Aligned_cols=30 Identities=20% Similarity=0.275 Sum_probs=21.6
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCCHh
Q 003029 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 651 (856)
Q Consensus 621 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~ 651 (856)
.+|-|.+.++|++|.+ .|..++++|+|+..
T Consensus 72 l~p~~gA~e~l~~L~~-~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRD-KGHEIVIITARPPE 101 (191)
T ss_dssp --B-TTHHHHHHHHHT-STTEEEEEEE-SSS
T ss_pred CCccHHHHHHHHHHHH-cCCcEEEEEecCcc
Confidence 4577789999999996 68788888888754
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=80.57 E-value=0.92 Score=47.26 Aligned_cols=43 Identities=5% Similarity=-0.147 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCc-ceEEeCC
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTI-STVRLDS 822 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~-~~v~V~~ 822 (856)
+.......++.+| +++++++.||| +.+|+.. +...| .+|.|..
T Consensus 140 ~p~~~~~~~~~~g------~~p~~~l~igD-s~~di~a----A~~aG~~~i~v~~ 183 (218)
T PRK11587 140 EPDAYLLGAQLLG------LAPQECVVVED-APAGVLS----GLAAGCHVIAVNA 183 (218)
T ss_pred CcHHHHHHHHHcC------CCcccEEEEec-chhhhHH----HHHCCCEEEEECC
Confidence 4567778888888 66899999999 9888665 55555 4677753
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=80.43 E-value=3.2 Score=41.40 Aligned_cols=69 Identities=14% Similarity=0.209 Sum_probs=46.4
Q ss_pred CeEEEEecCCccCCCCCCCCCC-Cc---ccc------ccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 591 NRLLILGFNATLTEPVDTPGRR-GD---QIR------EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~-~~---~~~------~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
++.+++|+|+||+.....|... .+ .++ ..--..-|-+.+.|..|.+ ...|+|.|.-+...++..+..+
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~--~yei~I~Ts~~~~yA~~il~~l 78 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSK--WYELVIFTASLEEYADPVLDIL 78 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHh--cCEEEEEcCCcHHHHHHHHHHH
Confidence 4679999999999765444210 00 000 0111344668899999875 4889999999888888888776
Q ss_pred C
Q 003029 661 N 661 (856)
Q Consensus 661 ~ 661 (856)
+
T Consensus 79 d 79 (162)
T TIGR02251 79 D 79 (162)
T ss_pred C
Confidence 3
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 856 | ||||
| 1uqu_A | 482 | Trehalose-6-Phosphate From E. Coli Bound With Udp-G | 4e-66 | ||
| 2wtx_A | 474 | Insight Into The Mechanism Of Enzymatic Glycosyltra | 5e-66 | ||
| 1gz5_A | 456 | Trehalose-6-Phosphate Synthase. Otsa Length = 456 | 3e-64 | ||
| 4f96_B | 497 | Crystal Structure Of Vlde, The Pseudo-Glycosyltrans | 2e-15 | ||
| 3t5t_A | 496 | Vall From Streptomyces Hygroscopicus In Apo Form Le | 2e-15 | ||
| 3t7d_A | 497 | Vall From Streptomyces Hygroscopicus In Complex Wit | 1e-14 |
| >pdb|1UQU|A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. Length = 482 | Back alignment and structure |
|
| >pdb|2WTX|A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase Length = 474 | Back alignment and structure |
|
| >pdb|1GZ5|A Chain A, Trehalose-6-Phosphate Synthase. Otsa Length = 456 | Back alignment and structure |
|
| >pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase, In Complex With Gdp Length = 497 | Back alignment and structure |
|
| >pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form Length = 496 | Back alignment and structure |
|
| >pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With Trehalose Length = 497 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Length = 482 | Back alignment and structure |
|---|
Score = 689 bits (1781), Expect = 0.0
Identities = 160/495 (32%), Positives = 248/495 (50%), Gaps = 22/495 (4%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQK 153
RL+VV+NR+ SAGGL +LG K W GW+G ++ K
Sbjct: 3 RLVVVSNRIAPPDEHAA--------SAGGLAVGILGALKAAGGLWFGWSGETGNEDQPLK 54
Query: 154 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 213
+ K L E + +YYN + N +LWP FHY RL + + +
Sbjct: 55 KVKKG--NITWASFNLSEQDLDEYYNQFSNAVLWPAFHY-------RLDLVQFQRPAWDG 105
Query: 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR 273
Y++ N + AD + +D D++W HDYHL+ L++ + ++G+FLH PFP+ EI
Sbjct: 106 YLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFN 165
Query: 274 TLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVED-QGRLTRVAAFP 332
LP+ LL + DL+GF T + F+ + + G+ R +P
Sbjct: 166 ALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYP 225
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
IGI+ + + P+ + +L+ + + V+RLD KG+P++ LA+E LE+
Sbjct: 226 IGIEPKEIAKQAA-GPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKY 284
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
GK+ QIA +R DV YQ + Q+ GRING++G L P+++L++ D
Sbjct: 285 PQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKL 344
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQ-DLKKGVLILSEFAGAAQSLGAGAILVNP 511
L ++ +DV LVT LRDGMNLV+ E+VA Q GVL+LS+FAGAA L A++VNP
Sbjct: 345 LMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT-SALIVNP 403
Query: 512 WNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIK 571
++ EVA A+ RAL MS ER RH + + W E F+S+L V + +
Sbjct: 404 YDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPRSAESQQ 463
Query: 572 QVPPSLREADSIERY 586
+ + ++E +
Sbjct: 464 RDKVATFPKLALEHH 478
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 3t7d_A* Length = 496 | Back alignment and structure |
|---|
Score = 655 bits (1692), Expect = 0.0
Identities = 107/500 (21%), Positives = 187/500 (37%), Gaps = 28/500 (5%)
Query: 92 SRQRLLVVANRLPVSAIRRGED-SWSLEISAGGLVSALLGV-KEFEARWIGWAGVNV--- 146
+ + + + R ++ ++ GG + + WI A
Sbjct: 1 TGSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVVAEQAGVLNISWIASADSEDDRR 60
Query: 147 PDEIGQKALTKALAEKRCIPVFL---DEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLAT 203
+ +T L R I V L D + N N++W +Y + + +
Sbjct: 61 ASALNPDGVTMELHSGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYG-WDRWTQPSF 119
Query: 204 TRSFQSQFAAYIKANQMFADVVNKHY--KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWF 261
+ +A + + + FAD + K V HDY L+ +P L+E D + F
Sbjct: 120 GSDAREGWADFGRFTRDFADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLF 179
Query: 262 LHTPFPSSEIHRTLPS--RSDLLRAVLAADLVGFHTYDYARHFVSACTRILG---FEGTP 316
+H P+PS++ R LP R+ +L +L A +GF + R+F+ + +L +
Sbjct: 180 VHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDARIDREA 239
Query: 317 EGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIK 376
VE +G TR+ P+G + ++E G ++++ R D IK
Sbjct: 240 MTVEWRGHRTRLRTMPLGYSPLTLDGR-----NPQLPEGIEEWADGHRLVVHSGRTDPIK 294
Query: 377 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 436
+ + AF L K +L P R VP +V V N G+
Sbjct: 295 NAERAVRAF--VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGS- 351
Query: 437 TAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA 496
+D D A + D+ + S DG NL ++E + + +ILSE
Sbjct: 352 ---DTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNE-RDADVILSETC 407
Query: 497 GAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 556
GAA+ LG VNP+++ E A AI+ AL P +R + T + W + +
Sbjct: 408 GAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAARPWTLEAWVQAQL 467
Query: 557 SELNDTVVEAQLRIKQVPPS 576
L ++ +
Sbjct: 468 DGLAADHAARTATAERFDTA 487
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 Length = 239 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 9e-26
Identities = 24/187 (12%), Positives = 61/187 (32%), Gaps = 18/187 (9%)
Query: 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652
L+ L ++ TL + P ++ L ++ L + +++G
Sbjct: 3 LIFLDYDGTLVPIIMNP----EESY-----ADAGLLSLISDL--KERFDTYIVTGRSPEE 51
Query: 653 LDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFE 712
+ + F ++ + +G + + + D + + P
Sbjct: 52 ISR-FLPLDINMICYHGACSKINGQIVYNNGSDRF-LGVFDRIYEDTRSWVSDFPGLRIY 109
Query: 713 QRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAA 772
++ +++++ + + + VE G +E+R GV KG+A
Sbjct: 110 RKNLAVLYHLGLMGAD----MKPKLRSRI-EEIARIFGVETYYGKMIIELRVPGVNKGSA 164
Query: 773 IDRILAE 779
I + E
Sbjct: 165 IRSVRGE 171
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 66.0 bits (160), Expect = 4e-11
Identities = 72/484 (14%), Positives = 141/484 (29%), Gaps = 163/484 (33%)
Query: 2 PGNSYNSNSSNIP------PDRVTRLVREKIERDLRKSSRASHPN------DVTDNGGRE 49
S + +SSNI + RL++ K + N +V +
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSK-----------PYENCLLVLLNVQNAKAWN 260
Query: 50 VFEDEQRL----RDG---DNLGPSI---VDEDLEGPASTPNEGCERLDGRTFSRQRLLVV 99
F ++ R D L + + D TP+E L + L
Sbjct: 261 AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL------LKYLDCR 314
Query: 100 ANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKAL 159
LP + +S +++ + ++ A W W VN LT +
Sbjct: 315 PQDLPREVLTTN----PRRLS---IIAESI--RDGLATWDNWKHVNC------DKLTTII 359
Query: 160 AEKRCIPVFLDEDIVHQYYNG--------------YCNNILWPLFHYLGLPQEDRLATTR 205
+ + V L+ + ++ ++W + + D
Sbjct: 360 --ESSLNV-LEPAEYRKMFDRLSVFPPSAHIPTILLS--LIW-----FDVIKSD----VM 405
Query: 206 SFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTP 265
++ Y +V K K+ + +L K EY
Sbjct: 406 VVVNKLHKY--------SLVEKQPKES-TISIPSIYLELKVKLENEY------------- 443
Query: 266 FPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDY-----ARHFVSACTRILGFEGTPEGVE 320
+HR++ ++ + + DL+ + Y H +
Sbjct: 444 ----ALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNI--------------- 484
Query: 321 DQGRLTRVAAFP-IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL-DMIK-- 376
+ R+ F + +D RF+ K ++ A ++ L +
Sbjct: 485 EHPE--RMTLFRMVFLDF-RFLEQ----------KIRHDSTAWNASGSILNTLQQLKFYK 531
Query: 377 -------GIPQKLL-AFEKFL---EENSDWRGKVV-LLQIAVPTRTDVPEYQRLTSQVHE 424
++L+ A FL EEN K LL+IA+ + E + + + H+
Sbjct: 532 PYICDNDPKYERLVNAILDFLPKIEENL-ICSKYTDLLRIAL-----MAEDEAIFEEAHK 585
Query: 425 IVGR 428
V R
Sbjct: 586 QVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 64.9 bits (157), Expect = 8e-11
Identities = 84/579 (14%), Positives = 156/579 (26%), Gaps = 176/579 (30%)
Query: 338 ERFIRALEINPVQVHIK------ELQETFAGRKVMLGVDRL-DMIKGIPQKLLA--FEKF 388
+ F+ + VQ K E+ + + G RL + ++++ E+
Sbjct: 27 DAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEV 86
Query: 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448
L N + ++ I R + Q + + +++ R
Sbjct: 87 LRINYKF----LMSPIKTEQRQPSMMTRMYIEQR-------DRLYNDNQVFAKYNVSRLQ 135
Query: 449 DFPAL-CALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAG-A 506
+ L AL LR N++ GVL G+G
Sbjct: 136 PYLKLRQALL---------ELRPAKNVLID----------GVL------------GSGKT 164
Query: 507 ILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQ-EWAETF-------VSE 558
+ +V + M K W N + + E + +
Sbjct: 165 WVAL-----DVCLSYKVQCKMD----FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTS 215
Query: 559 LNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIRE 618
+D +LRI + LR + Y LL+L ++
Sbjct: 216 RSDHSSNIKLRIHSIQAELRRLLKSKPYENC---LLVL-----------------LNVQN 255
Query: 619 MELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD--KNFQEYNLWLAAENGMFLRCTT 676
+ NA + I++ + + V D ++ L +
Sbjct: 256 AKA---------WNAF--NLSCKILLTT-RFKQVTDFLSAATTTHISLDHHSMTLTPDEV 303
Query: 677 ----GKWM------------TTMPEHLNM-------------EW----VDSLKHVFEYFT 703
K++ TT P L++ W D L + E
Sbjct: 304 KSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSL 363
Query: 704 ER-TPRSHFEQRETSLVWNYKY-----ADVEFGRIQARDMLQHLWTGPISNASVEVVQG- 756
P E R+ + I +L +W I + + VV
Sbjct: 364 NVLEPA---EYRK-----MFDRLSVFPPSA---HIPT-ILLSLIWFDVIKSDVMVVVNKL 411
Query: 757 -SKSVEVRAVGVTKGAAIDRI-LAEIVHSKKMKTAIDYVL---CIGHFLGKNCNLPLQFL 811
S+ V K I + I K+K +Y L + H+ N+P F
Sbjct: 412 HKYSL------VEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHY-----NIPKTFD 460
Query: 812 MQTISTVRLDSSFLHYL--RMKMCMRFLSQNYLMMARAF 848
+ LD F ++ +K + + F
Sbjct: 461 SDDLIPPYLDQYFYSHIGHHLKNIEH--PERMTLFRMVF 497
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 2e-07
Identities = 48/281 (17%), Positives = 81/281 (28%), Gaps = 47/281 (16%)
Query: 205 RSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHT 264
+ + Y+ N+ + ++ D V HD L ++ Y W H
Sbjct: 102 KLTEEMKELYLNVNRENSKFIDLS--SFDYVLVHDPQPAAL---IEFYEKKSPWLWRCHI 156
Query: 265 PFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGR 324
S L R V D FH +Y + +
Sbjct: 157 DLSS----PNREFWEFLRRFVEKYDRYIFHLPEYVQPELDR------------------- 193
Query: 325 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 381
+ P ID + Q I + E F + ++ V R D KGI
Sbjct: 194 -NKAVIMPPSIDPLSE---KNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDV 249
Query: 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441
+ + K E+ + L + D PE + +G + +
Sbjct: 250 IEIYRKVKEKIPGVQ-----LLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGV 304
Query: 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482
H + + A +DV L S+R+G L E +
Sbjct: 305 HARE-------VNAFQRASDVILQMSIREGFGLTVTEAMWK 338
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 48.8 bits (116), Expect = 7e-06
Identities = 49/361 (13%), Positives = 104/361 (28%), Gaps = 53/361 (14%)
Query: 212 AAYIKANQMFADVVNKHYKDGDVV-----------WCHDYHLMFLPKCLKEYNSDMKVGW 260
K D++ +Y DG++V C H + K +SD+
Sbjct: 398 VELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYP---DSDIYWKK 454
Query: 261 FLHTPFPSSEIH--RTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEG 318
S + + +D + ++ G +A T +
Sbjct: 455 LDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGI 514
Query: 319 VEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF----------------AG 362
+ V G D + E E
Sbjct: 515 DVFDPKFNIV---SPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKK 571
Query: 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT--RTDVPEYQRLTS 420
+ ++ + RLD +K + + + K VV + + E +++
Sbjct: 572 KPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYD 631
Query: 421 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT-DVALVTSLRDGMNLVSYEF 479
+ E ++NG+F +++ +DR L T + +L + L E
Sbjct: 632 LIEEY--KLNGQFRWISS----QMDRV-RNGELYRYICDTKGAFVQPALYEAFGLTVVEA 684
Query: 480 VACQDLKKGV-LILSEFAGAAQSLGAG--AILVNPWNITEVANAIARALNMSPEEREKRH 536
+ C G+ + G A+ + G ++P++ + A+ +A E+
Sbjct: 685 MTC-----GLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWD 739
Query: 537 W 537
Sbjct: 740 E 740
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 48.2 bits (114), Expect = 7e-06
Identities = 22/264 (8%), Positives = 59/264 (22%), Gaps = 49/264 (18%)
Query: 295 TYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIK 354
TY Y ++ L + T F I++ +
Sbjct: 189 TYKYRGPQIAVFNSELLKQYFNNKG---YNFTDEYFFQPKINTTLKNYINDKRQ------ 239
Query: 355 ELQETFAGRKVMLGVDRLDMI-KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVP 413
K++L R + + A + F+++ ++
Sbjct: 240 -------KEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKII------------ 280
Query: 414 EYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMN 473
VG + + ++ L L L + + + + +
Sbjct: 281 -----------SVGEKHKDIALGKGIHLNSL-GKLTLEDYADLLKRSSIGISLMISPHPS 328
Query: 474 LVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 531
E G+ +++ + + + N +A +
Sbjct: 329 YPPLEMAHF-----GLRVITNKYENKDLSNWHSNIVSLEQLNPENIAETLVELCMS-FNN 382
Query: 532 REKRHWHNFTHVTTHTAQEWAETF 555
R+ + +
Sbjct: 383 RDVDKKESSNMMFYINEFNEFSFI 406
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 5e-05
Identities = 42/213 (19%), Positives = 71/213 (33%), Gaps = 29/213 (13%)
Query: 327 RVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFE 386
R++ G D E + + + + KV+ V RL KG + A
Sbjct: 209 RISVVSPGADVELYSPGNDRATERS--RRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVA 266
Query: 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHE--IVGRINGRFGTLTAVPIHHL 444
+ + D +V+ I E + RI RF +
Sbjct: 267 ALFDRDPDRNLRVI---ICGGPSGPNATPDTYRHMAEELGVEKRI--RF-------LDPR 314
Query: 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV-LILSEFAGAAQSLG 503
L A+Y D+ V S + LV+ E A G +I + G ++
Sbjct: 315 PP----SELVAVYRAADIVAVPSFNESFGLVAMEAQAS-----GTPVIAARVGGLPIAVA 365
Query: 504 AG--AILVNPWNITEVANAIARALNMSPEEREK 534
G +LV+ + A+A+A L+ E R +
Sbjct: 366 EGETGLLVDGHSPHAWADALATLLD-DDETRIR 397
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 2e-04
Identities = 58/379 (15%), Positives = 112/379 (29%), Gaps = 58/379 (15%)
Query: 194 GLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDG-----------DVVWCHDYHL 242
LP+E+ + ++ + + F VV HY DG + + H
Sbjct: 93 FLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHS 152
Query: 243 MFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHF 302
+ K K + I + AD + T
Sbjct: 153 LGAQKMEKLNVNTSNFKEMDERFKFHRRII-------AERLTMSYADKIIVSTSQERFGQ 205
Query: 303 VSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG 362
S + + + P G+++ F K L+
Sbjct: 206 YSHDLYRGAVNVEDDD--------KFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGS 257
Query: 363 ----RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV---PEY 415
++ RLD K + A+ + E + L I P E
Sbjct: 258 ERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEE 317
Query: 416 QRLTSQVHEIVGR--INGRFGTLTAVPIHHLDRSLDFPALCALYAVT-DVALVTSLRDGM 472
+ + ++ E++ G+ ++ + + L A A V +TS +
Sbjct: 318 KEILGKIIELIDNNDCRGKV----SMFPLNSQQEL--AGCYAYLASKGSVFALTSFYEPF 371
Query: 473 NLVSYEFVACQDLKKGV-LILSEFAGAAQSLGAG--AILVNPWNITEVANAIARALNMSP 529
L E +A G+ +++ G A+ L G +LV+P + ++A + +A S
Sbjct: 372 GLAPVEAMAS-----GLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFE-SE 425
Query: 530 EERE-------KRHWHNFT 541
E +R +T
Sbjct: 426 ETWSAYQEKGKQRVEERYT 444
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 38/307 (12%), Positives = 86/307 (28%), Gaps = 53/307 (17%)
Query: 258 VGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTR----ILGFE 313
+ + E L + R A + F + + +
Sbjct: 98 AADVCYAEKVAQE-KGFLYRLTSRYRHYAAFERATFEQGK-STKLMMLTDKQIADFQKHY 155
Query: 314 GTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLD 373
T R P GI +R N +++ ++ + ++L V
Sbjct: 156 QTEPE--------RFQILPPGIYPDRKYSEQIPNSREIYRQKNG-IKEQQNLLLQVGSDF 206
Query: 374 MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHE--IVGRING 431
KG+ + + A E LL + + ++ + + + +
Sbjct: 207 GRKGVDRSIEALASLPESLRHNT----LLFVV-----GQDKPRKFEALAEKLGVRSNV-- 255
Query: 432 RF-GTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV- 489
F V L A D+ L + ++ +V E + G+
Sbjct: 256 HFFSGRNDVS--------------ELMAAADLLLHPAYQEAAGIVLLEAITA-----GLP 296
Query: 490 LILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 546
++ + G A + G ++ P++ ++ + +AL R + + T
Sbjct: 297 VLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALT-QSPLRMAWAENARHYADTQ 355
Query: 547 TAQEWAE 553
E
Sbjct: 356 DLYSLPE 362
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 856 | |||
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 100.0 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.96 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.94 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.93 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.93 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.93 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.93 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 99.92 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.92 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.92 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.92 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.91 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.91 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.91 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.9 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 99.88 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.88 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.88 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.87 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.86 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.86 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.86 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.86 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.85 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 99.84 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 99.84 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.83 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.83 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.83 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.82 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.82 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.82 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.82 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.81 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.81 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.81 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.81 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.81 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.8 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.8 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.8 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.79 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.77 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.76 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.76 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.76 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.74 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.71 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.68 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.65 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.63 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.6 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.6 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.41 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.33 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.09 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.05 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.04 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.04 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 98.98 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 98.95 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.95 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 98.88 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.82 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 98.77 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.76 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.67 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.63 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.62 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 98.58 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.57 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 98.55 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.52 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.49 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.48 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 98.47 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 98.42 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 98.4 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.4 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 98.37 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 98.36 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.35 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.34 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.28 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 98.26 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 98.25 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.25 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 98.21 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 98.18 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 98.17 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 98.16 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.11 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.1 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.09 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.09 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.09 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.08 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.06 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 98.03 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.0 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.97 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.95 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 97.92 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.91 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.9 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.88 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.88 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 97.84 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.81 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.8 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.75 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.75 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 97.75 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 97.73 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 97.69 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 97.67 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.6 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.53 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.52 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 97.5 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 97.45 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 97.41 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.4 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 97.4 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 97.24 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.19 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 97.11 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 97.09 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.02 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 97.01 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 96.92 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 96.88 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 96.87 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 96.86 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.77 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 96.69 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 96.61 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 96.61 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 96.47 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 96.39 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 96.31 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 96.27 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.16 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 95.9 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 95.89 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 95.88 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.86 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.62 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 95.53 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 95.31 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 95.26 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 95.2 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 95.09 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 95.04 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 94.9 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 94.85 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 94.79 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 94.68 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 94.51 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 94.51 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 94.48 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 94.43 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 94.23 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 94.06 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 94.03 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 93.67 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 93.49 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 93.32 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 93.14 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 93.04 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 92.83 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 92.83 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 92.55 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 92.3 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 92.24 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 92.03 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 91.75 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 91.64 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 91.26 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 91.15 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 90.94 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 90.93 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 90.51 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 90.09 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 89.85 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 89.82 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 89.72 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 89.69 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 89.67 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 89.58 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 88.85 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 88.77 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 88.64 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 88.46 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 88.34 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 88.28 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 87.73 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 87.72 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 87.62 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 87.59 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 86.74 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 86.13 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 85.2 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 85.02 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 84.72 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 84.59 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 84.47 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 84.34 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 84.14 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 83.25 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 82.1 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 81.56 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 81.25 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 81.19 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 80.24 |
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-103 Score=897.56 Aligned_cols=453 Identities=23% Similarity=0.320 Sum_probs=403.6
Q ss_pred CCcEEEEEcCCccceeec-CCCcE---EEEecCCcHHHhhcccccCCcEEEEeCCCCCCCchhhHHHHH----------h
Q 003029 93 RQRLLVVANRLPVSAIRR-GEDSW---SLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTK----------A 158 (856)
Q Consensus 93 ~~~livvsnrlP~~~~~~-~~~~~---~~~~~~ggl~~~l~~~~~~~~~Wvg~~g~~~~~~~~~~~~~~----------~ 158 (856)
..+||||||||||.++++ ++|.| .++.++|||++||.++. +|+||||+|... +.....+ .
T Consensus 2 ~~~livvsnR~P~~~~~~~~~g~~~~~~~~~s~GGLv~al~~~~--~~~Wvgw~~~~~----~~~~~~~~~~~~~~~~~~ 75 (496)
T 3t5t_A 2 GSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVVAEQAGVL--NISWIASADSED----DRRASALNPDGVTMELHS 75 (496)
T ss_dssp --CEEEEESCCCEEEEECTTTCSEEEEECSSHHHHHHHHHHHHH--TCCEEEECCSHH----HHHHHHHCTTCEEEECTT
T ss_pred CCCEEEEECCCCeeEEEecCCCceeeeeeccCCCchHHHHhhhc--CCEEEecCCCcc----chhhhhcccccccccccc
Confidence 468999999999999988 57887 67788999999999987 899999998531 1112211 2
Q ss_pred hcCceEEEEecChHhHHHHHhhhhhhhccccccCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHHhc--CCCCEE
Q 003029 159 LAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHY--KDGDVV 235 (856)
Q Consensus 159 ~~~~~~~pV~l~~~~~~~~y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fa~~i~~~~--~~~DvI 235 (856)
..+++|+||+|+++++++||+||||++|||+|||+.+.+. .+ ....|+ +.|++|++||++||++|.+.+ +++|+|
T Consensus 76 ~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPl~H~~~~~~~-~p-~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~~D~V 153 (496)
T 3t5t_A 76 GREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWT-QP-SFGSDAREGWADFGRFTRDFADAILKSSAQSADPVY 153 (496)
T ss_dssp SCEEEEEEECCCHHHHHHHHHHHSTTTHHHHHTTCCCSSS-CC-CBCHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSCEE
T ss_pred CCCeEEEEEeCCHHHHHHHHHHhHhhhcchhhccccccCC-CC-ccchhhHHHHHHHHHHHHHHHHHHHHHhccCCCCEE
Confidence 4679999999999999999999999999999999843220 00 012344 569999999999999999999 589999
Q ss_pred EEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCc--ccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh-Cc
Q 003029 236 WCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP--SRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL-GF 312 (856)
Q Consensus 236 wvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp--~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l-g~ 312 (856)
|||||||+++|.+||+++|+++||||||||||++|+|++|| ||++|++|||+||+|||||++|++||+++|++++ |.
T Consensus 154 wVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~ 233 (496)
T 3t5t_A 154 LVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDA 233 (496)
T ss_dssp EEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTC
T ss_pred EEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999 7999999999999999999999999999999999 87
Q ss_pred cc--CCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHH
Q 003029 313 EG--TPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (856)
Q Consensus 313 ~~--~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~ 390 (856)
+. ...+++++|+.++|.++|+|||++.|.+... ++ .+.+|++++++++||+||||++.||+..+|+|| +|++
T Consensus 234 ~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~--~~---~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Af-~ll~ 307 (496)
T 3t5t_A 234 RIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNP--QL---PEGIEEWADGHRLVVHSGRTDPIKNAERAVRAF-VLAA 307 (496)
T ss_dssp EEETTTTEEEETTEEEEEEECCCCBCGGGC----C--CC---CTTHHHHHTTSEEEEEEEESSGGGCHHHHHHHH-HHHH
T ss_pred cccccCCeEEECCEEEEEEEeccEeCHHHhchhhH--HH---HHHHHHHhCCceEEEEcccCccccCHHHHHHHH-HHHH
Confidence 65 3457899999999999999999999987643 11 145778888999999999999999999999999 9999
Q ss_pred hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCc
Q 003029 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (856)
Q Consensus 391 ~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~E 470 (856)
++|+++ +++|+|||.|+++++++|+++++++++++++||++||+. ||+| .+.++.+++.++|++|||||+||++|
T Consensus 308 ~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~---~V~f-~g~v~~~el~aly~~ADv~vv~SlrE 382 (496)
T 3t5t_A 308 RGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD---TVRI-DNDNDVNHTIACFRRADLLIFNSTVD 382 (496)
T ss_dssp HTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT---SEEE-EECCCHHHHHHHHHHCSEEEECCSSB
T ss_pred hCcccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc---CEEE-eCCCCHHHHHHHHHhccEEEECcccc
Confidence 999999 999999999999999999999999999999999999875 7886 57899999999999999999999999
Q ss_pred CCChhHHHHHhhcCCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHH
Q 003029 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQE 550 (856)
Q Consensus 471 G~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~ 550 (856)
|||||++|||||+ +++||+|+|+++|++++++.+|++|||+|++++|+||.++|+|+++||++|+++++++|.+||+.+
T Consensus 383 GfgLv~~EamA~~-~~~g~lVlSe~aGa~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~~d~~~ 461 (496)
T 3t5t_A 383 GQNLSTFEAPLVN-ERDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAARPWTLEA 461 (496)
T ss_dssp SCCSHHHHHHHHC-SSCCEEEEETTBTTHHHHGGGSEEECTTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCBHHH
T ss_pred cCChhHHHHHHhC-CCCCCEEEeCCCCCHHHhCCCEEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHH
Confidence 9999999999996 457999999999999999778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHh
Q 003029 551 WAETFVSELNDTVVE 565 (856)
Q Consensus 551 W~~~fl~~l~~~~~~ 565 (856)
|+++||++|..+...
T Consensus 462 W~~~fl~~L~~~~~~ 476 (496)
T 3t5t_A 462 WVQAQLDGLAADHAA 476 (496)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcccc
Confidence 999999999887544
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-90 Score=797.41 Aligned_cols=449 Identities=35% Similarity=0.622 Sum_probs=407.9
Q ss_pred CcEEEEEcCCccceeecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEEecChH
Q 003029 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDED 172 (856)
Q Consensus 94 ~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~ 172 (856)
+||||||||+|+.. ++ +.++|||++||.++ +..+++||||+|.. ++ +++........+++|+||||+++
T Consensus 2 ~~livvsnr~p~~~----~~----~~~~ggl~~~l~~~~~~~~~~wvgw~g~~-~~-~~~~~~~~~~~~~~~~~v~l~~~ 71 (482)
T 1uqt_A 2 SRLVVVSNRIAPPD----EH----AASAGGLAVGILGALKAAGGLWFGWSGET-GN-EDQPLKKVKKGNITWASFNLSEQ 71 (482)
T ss_dssp CCEEEEEEECCCCC------------CCCHHHHHHHHHHHHHCEEEEEEEEEE-SC-CSSCCEEEEETTEEEEEEEECHH
T ss_pred CCEEEEECCCCCCC----CC----CcCCCcHHHHHHHHHhhCCCEEEeCCCCC-Cc-ccchhhhhccCCceEEEEECCHH
Confidence 57999999999972 11 36899999999998 77899999999965 22 11111112346899999999999
Q ss_pred hHHHHHhhhhhhhccccccCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHh
Q 003029 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (856)
Q Consensus 173 ~~~~~y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~ 251 (856)
++++||+||||++|||+|||..... .|+ ..|.+|.++|+.||+++.+.++++|+|||||||++++|.++|+
T Consensus 72 ~~~~~y~gf~~~~lWp~~H~~~~~~--------~~~~~~w~~y~~vN~~fa~~l~~~~~~~DiV~vHdyhl~~l~~~lr~ 143 (482)
T 1uqt_A 72 DLDEYYNQFSNAVLWPAFHYRLDLV--------QFQRPAWDGYLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRK 143 (482)
T ss_dssp HHHHHTTTHHHHTHHHHHTTCGGGC--------CCCHHHHHHHHHHHHHHHHHHGGGCCTTCEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHhhhhhccccccCcCCcc--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECchHHHHHHHHHH
Confidence 9999999999999999999985322 366 4599999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCC-CceeeCCeeEEEEE
Q 003029 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVAA 330 (856)
Q Consensus 252 ~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~-~~v~~~g~~~~v~v 330 (856)
+.++++|+||+|+|||++++|+++|++++++++++++|+|+||++.|+++|+++|+++++.+... ..++++|+..+|.+
T Consensus 144 ~~~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~v 223 (482)
T 1uqt_A 144 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEV 223 (482)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEE
T ss_pred hCCCCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccCCeEEECCeEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999886543 44778899999999
Q ss_pred eecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCC
Q 003029 331 FPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 410 (856)
Q Consensus 331 iP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~ 410 (856)
+|+|||++.|.+....+++.+ ...+|++++++++|++||||++.||+..+|+||++|++++|+++++++|+|||.|+++
T Consensus 224 ip~GID~~~f~~~~~~~~~~~-~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~ 302 (482)
T 1uqt_A 224 YPIGIEPKEIAKQAAGPLPPK-LAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRG 302 (482)
T ss_dssp CCCCCCHHHHHHHHHSCCCHH-HHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCST
T ss_pred EeccCCHHHHHHHhcCcchHH-HHHHHHHhCCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCcc
Confidence 999999999987665565555 6778888999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcC-CCCce
Q 003029 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-LKKGV 489 (856)
Q Consensus 411 ~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~-~~~g~ 489 (856)
++++|+++++++++++++||.+||..+|.||+|+.|.++++++.++|++|||||+||++||||||++||||||. +++||
T Consensus 303 ~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gp 382 (482)
T 1uqt_A 303 DVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGV 382 (482)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCE
T ss_pred chHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999983 45689
Q ss_pred EEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003029 490 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 490 lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (856)
||+|+++|+++++ .+|++|||+|++++|++|.++|+|++++|++++++++++|.+||+..|++.|++.|+++
T Consensus 383 vV~S~~~G~~~~l-~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 383 LVLSQFAGAANEL-TSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp EEEETTBGGGGTC-TTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred EEEECCCCCHHHh-CCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 9999999999999 79999999999999999999999999999999999999999999999999999999887
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-26 Score=262.13 Aligned_cols=313 Identities=18% Similarity=0.185 Sum_probs=237.0
Q ss_pred HHHHHHHHHHHHHHHHHh---cCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCch---hhhh--------cCc
Q 003029 211 FAAYIKANQMFADVVNKH---YKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS---EIHR--------TLP 276 (856)
Q Consensus 211 w~~Y~~vN~~fa~~i~~~---~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~fr--------~lp 276 (856)
+..+....+.....+... -...|+|++|+++..+++.++++ ..++++.+++|..++.. ..+. ...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~-~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 177 (439)
T 3fro_A 99 IRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKK-YFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYP 177 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHH-HHCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSS
T ss_pred hhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhh-ccCCCEEEEecccccccCchHHhCccccccccccc
Confidence 344444444444444444 34679999999999888888874 35789999999987531 1111 111
Q ss_pred ccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHH
Q 003029 277 SRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKEL 356 (856)
Q Consensus 277 ~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~l 356 (856)
........+..+|.|.+.+..+.+.... .++. ...++.++|+|||.+.|.+....+...+....+
T Consensus 178 ~~~~~~~~~~~ad~ii~~S~~~~~~~~~----~~~~-----------~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~ 242 (439)
T 3fro_A 178 DIDPEHTGGYIADIVTTVSRGYLIDEWG----FFRN-----------FEGKITYVFNGIDCSFWNESYLTGSRDERKKSL 242 (439)
T ss_dssp EECHHHHHHHHCSEEEESCHHHHHHTHH----HHGG-----------GTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHH
T ss_pred eeeHhhhhhhhccEEEecCHHHHHHHhh----hhhh-----------cCCceeecCCCCCchhcCcccccchhhhhHHHH
Confidence 1123334456799999999877766322 1111 234688999999999998764333334455667
Q ss_pred HHHhc--CCceEEEeeccc-ccCChHHHHHHHHHHHHhC--cCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhc
Q 003029 357 QETFA--GRKVMLGVDRLD-MIKGIPQKLLAFEKFLEEN--SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING 431 (856)
Q Consensus 357 r~~~~--~~~iIl~V~Rld-~~KGi~~~L~Af~~~l~~~--P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~ 431 (856)
+++++ ++++|+++||+. +.||++.+++|++.+.+++ |+ +.|+++|.+ +. .+.+.+++++.+.+
T Consensus 243 ~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~----~~l~i~G~g-----~~--~~~~~l~~~~~~~~- 310 (439)
T 3fro_A 243 LSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKG-----DP--ELEGWARSLEEKHG- 310 (439)
T ss_dssp HHHHTCCSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGG----EEEEEECCC-----CH--HHHHHHHHHHHHCT-
T ss_pred HHHcCCCCCcEEEEEcccccccccHHHHHHHHHHHHhcccCCC----eEEEEEcCC-----Ch--hHHHHHHHHHhhcC-
Confidence 77763 448999999999 9999999999999998765 65 558877632 21 23456666665543
Q ss_pred ccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc-cCCeEEEC
Q 003029 432 RFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-GAGAILVN 510 (856)
Q Consensus 432 ~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l-g~~g~lVn 510 (856)
.++++.|.++.+++..+|+.||++|+||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++
T Consensus 311 --------~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G----~Pvi~s~~~~~~e~~~~~~g~~~~ 378 (439)
T 3fro_A 311 --------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG----AIPIASAVGGLRDIITNETGILVK 378 (439)
T ss_dssp --------TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTT----CEEEEESSTHHHHHCCTTTCEEEC
T ss_pred --------CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCC----CCeEEcCCCCcceeEEcCceEEeC
Confidence 25667999999999999999999999999999999999999994 899999999999988 44899999
Q ss_pred CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhH
Q 003029 511 PWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563 (856)
Q Consensus 511 P~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 563 (856)
|.|++++|++|.++++++++.+.++.++++++++.+++..+++.+++.++++.
T Consensus 379 ~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 431 (439)
T 3fro_A 379 AGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSI 431 (439)
T ss_dssp TTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCS
T ss_pred CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Confidence 99999999999999995566888888999999999999999999999888764
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-25 Score=261.40 Aligned_cols=297 Identities=17% Similarity=0.206 Sum_probs=206.3
Q ss_pred CCCCEEEEeCccchhHHHHHHhcC------CCCeEEEEEecCC-----Cchhhh-hcCcc--------------------
Q 003029 230 KDGDVVWCHDYHLMFLPKCLKEYN------SDMKVGWFLHTPF-----PSSEIH-RTLPS-------------------- 277 (856)
Q Consensus 230 ~~~DvIwvHDyhl~llp~~lr~~~------~~~~i~~flH~Pf-----P~~e~f-r~lp~-------------------- 277 (856)
.++||+++||||..++|.+++... .+++++|++|..- |....- ..++.
T Consensus 152 ~~ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (536)
T 3vue_A 152 GEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRK 231 (536)
T ss_dssp CSCEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEE
T ss_pred CCCEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccc
Confidence 356899999999999999998754 3789999999752 111100 01111
Q ss_pred cHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcC--------Cch
Q 003029 278 RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI--------NPV 349 (856)
Q Consensus 278 ~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~--------~~~ 349 (856)
-.-+-.++..||.|..-++.|++..++. .+. ..++....+..++.+||||||.+.|.+.... ...
T Consensus 232 ~n~~k~~i~~ad~v~tVS~~~a~ei~~~----~~~---g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~ 304 (536)
T 3vue_A 232 INWMKAGILEADRVLTVSPYYAEELISG----IAR---GCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTA 304 (536)
T ss_dssp EEHHHHHHHHCSEEEESCHHHHHHHHTT----CCC---CSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTH
T ss_pred hhHHHHHHHhccEEEEcCHHHhhhhhcc----ccc---ccccccccccCCeEEEECCcchhhcCCCCccccccccchhhh
Confidence 1234567888999999999888765421 111 0111222345678999999999999864211 000
Q ss_pred ---H-HHHHHHHHHh-----cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHH
Q 003029 350 ---Q-VHIKELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTS 420 (856)
Q Consensus 350 ---~-~~~~~lr~~~-----~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~ 420 (856)
+ .....+++.+ ++.++|++|||+++.||++.+|+|+++++++++ .|+++|.+ +. .+ ..
T Consensus 305 ~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~------~l~l~G~G---~~-~~---~~ 371 (536)
T 3vue_A 305 IEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDV------QIVLLGTG---KK-KF---EK 371 (536)
T ss_dssp HHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSC------EEEEECCB---CH-HH---HH
T ss_pred hhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCC------eEEEEecc---Cc-hH---HH
Confidence 1 1122344444 367899999999999999999999999976543 35556532 22 22 23
Q ss_pred HHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchh
Q 003029 421 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ 500 (856)
Q Consensus 421 ~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~ 500 (856)
.++.+...++. .+.+ .+..+.+++..+|+.||+||+||.+||||++++|||||+ .|+|+|+.+|+.+
T Consensus 372 ~~~~~~~~~~~--------~v~~-~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G----~PvI~s~~gG~~e 438 (536)
T 3vue_A 372 LLKSMEEKYPG--------KVRA-VVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYG----TPCACASTGGLVD 438 (536)
T ss_dssp HHHHHHHHSTT--------TEEE-ECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTT----CCEEECSCTHHHH
T ss_pred HHHHHHhhcCC--------ceEE-EEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHcC----CCEEEcCCCCchh
Confidence 33344333322 2554 677899999999999999999999999999999999994 9999999999999
Q ss_pred hc--cCCeE----------EECCCCHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003029 501 SL--GAGAI----------LVNPWNITEVANAIARALN--MSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 501 ~l--g~~g~----------lVnP~d~~~lA~ai~~aL~--~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (856)
.+ |.+|+ +|+|.|++++|++|.++|. ..+ +++++.++.. .+.++|..=++++++-+.+.
T Consensus 439 ~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~-~~~~~~~~am--~~~fSW~~~A~~y~~ly~~L 511 (536)
T 3vue_A 439 TVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTP-AYEEMVRNCM--NQDLSWKGPAKNWENVLLGL 511 (536)
T ss_dssp HCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSH-HHHHHHHHHH--HSCCSSHHHHHHHHHHHHTT
T ss_pred eeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcH-HHHHHHHHHH--HhcCCHHHHHHHHHHHHHHh
Confidence 88 56777 7888999999999999986 333 3333333322 24688888888888877654
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.2e-24 Score=246.42 Aligned_cols=300 Identities=19% Similarity=0.161 Sum_probs=212.2
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCch----hhhhc--Cc-------------ccHHHHHHhhcCCEE
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS----EIHRT--LP-------------SRSDLLRAVLAADLV 291 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~----e~fr~--lp-------------~~~~il~~ll~aDlI 291 (856)
..|+|++|+++..+++.+++.+..++|+++++|..++.. ..+.. ++ ........+..+|.|
T Consensus 129 ~~Divh~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 208 (485)
T 2qzs_A 129 RPDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHI 208 (485)
T ss_dssp CCSEEEEETGGGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEE
T ss_pred CCCEEEeeccchhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeE
Confidence 579999999998888888763456899999999875421 11111 01 011222335579999
Q ss_pred EEeCHHHHHHHHHHHHHHhCcccCCCceeeCCee--EEEEEeecccChhhhhhhhcC-----------CchHHHHHHHHH
Q 003029 292 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRL--TRVAAFPIGIDSERFIRALEI-----------NPVQVHIKELQE 358 (856)
Q Consensus 292 gf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~--~~v~viP~GID~~~f~~~~~~-----------~~~~~~~~~lr~ 358 (856)
...+....+.+... .+|... +.+ ...+. .++.++|+|||.+.|.+.... +........+++
T Consensus 209 i~~S~~~~~~~~~~---~~~~~~--~~~-~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 282 (485)
T 2qzs_A 209 TAVSPTYAREITEP---QFAYGM--EGL-LQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQI 282 (485)
T ss_dssp EESSHHHHHHTTSH---HHHTTC--HHH-HHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHH
T ss_pred EecCHHHHHHHhcc---ccCcch--HHH-HHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHH
Confidence 99988766554321 011000 000 00011 468899999999988754210 001112345666
Q ss_pred Hhc-----CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhccc
Q 003029 359 TFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF 433 (856)
Q Consensus 359 ~~~-----~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~ 433 (856)
+++ ++++|++|||+.+.||++.+|+|++.+.+ ++ +.|+++|.+ +. .+.+++++++.+.+.
T Consensus 283 ~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~----~~l~ivG~g-----~~--~~~~~l~~~~~~~~~-- 347 (485)
T 2qzs_A 283 AMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QG----GQLALLGAG-----DP--VLQEGFLAAAAEYPG-- 347 (485)
T ss_dssp HHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TT----CEEEEEEEE-----CH--HHHHHHHHHHHHSTT--
T ss_pred HcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CC----cEEEEEeCC-----ch--HHHHHHHHHHHhCCC--
Confidence 663 56899999999999999999999999876 23 568888742 21 234566666655431
Q ss_pred CCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--c--------
Q 003029 434 GTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G-------- 503 (856)
Q Consensus 434 g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g-------- 503 (856)
.|+++.|. +.+++..+|+.||++|+||.+||||++++||||| |.|+|+|+.+|..+.+ |
T Consensus 348 ------~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~----G~PvI~s~~gg~~e~v~~~~~~~~~~~ 416 (485)
T 2qzs_A 348 ------QVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKY----GTLPLVRRTGGLADTVSDCSLENLADG 416 (485)
T ss_dssp ------TEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH----TCEEEEESSHHHHHHCCBCCHHHHHTT
T ss_pred ------cEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHC----CCCEEECCCCCccceeccCcccccccc
Confidence 37656777 8888999999999999999999999999999999 4999999999999888 4
Q ss_pred -CCeEEECCCCHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHH
Q 003029 504 -AGAILVNPWNITEVANAIARALN--MSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVV 564 (856)
Q Consensus 504 -~~g~lVnP~d~~~lA~ai~~aL~--~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~ 564 (856)
.+|++|+|.|++++|++|.++++ ..++.+.++.+++++ +.+++...++.+++-+++...
T Consensus 417 ~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~~~ 478 (485)
T 2qzs_A 417 VASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRLKL 478 (485)
T ss_dssp CCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHC-
T ss_pred ccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHHHhhh
Confidence 68999999999999999999994 245566666666653 789999999999888877643
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.3e-25 Score=255.29 Aligned_cols=303 Identities=16% Similarity=0.082 Sum_probs=215.9
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhh-hhc--C--c---------ccHHH-HHHhhcCCEEEEeC
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI-HRT--L--P---------SRSDL-LRAVLAADLVGFHT 295 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~-fr~--l--p---------~~~~i-l~~ll~aDlIgf~t 295 (856)
..|+||+|+++..+++.++.+. .++|+.+++|..++.... +.. . | .+..+ ...+..+|.|.+.+
T Consensus 120 ~~Divh~~~~~~~~~~~~~~~~-~~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S 198 (499)
T 2r60_A 120 FPQVVTTHYGDGGLAGVLLKNI-KGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVST 198 (499)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHH-HCCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESS
T ss_pred CCCEEEEcCCcchHHHHHHHHh-cCCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECC
Confidence 5699999998766666655543 367889999986432110 000 0 0 00011 12345689998888
Q ss_pred HHHHHHHHHHHHHH--hC-cccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhc--------CCc
Q 003029 296 YDYARHFVSACTRI--LG-FEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA--------GRK 364 (856)
Q Consensus 296 ~~~~~~Fl~~~~~~--lg-~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~--------~~~ 364 (856)
....+.+.. . +| ... .....++.++|+|||.+.|.+... .+....++++++ +++
T Consensus 199 ~~~~~~~~~----~~~~g~~~~-------~~~~~ki~vi~ngvd~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~ 263 (499)
T 2r60_A 199 SQERFGQYS----HDLYRGAVN-------VEDDDKFSVIPPGVNTRVFDGEYG----DKIKAKITKYLERDLGSERMELP 263 (499)
T ss_dssp HHHHHHTTT----SGGGTTTCC-------TTCGGGEEECCCCBCTTTSSSCCC----HHHHHHHHHHHHHHSCGGGTTSC
T ss_pred HHHHHHHHh----hhccccccc-------ccCCCCeEEECCCcChhhcCccch----hhhHHHHHHHhcccccccCCCCc
Confidence 755544321 1 11 100 002357889999999998865311 122234555543 678
Q ss_pred eEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCC----h---HHHHHHHHHHHHHHHHhhcccCCCC
Q 003029 365 VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD----V---PEYQRLTSQVHEIVGRINGRFGTLT 437 (856)
Q Consensus 365 iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~----~---~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (856)
+|++|||+.+.||+..+|+|+..+.+++|+. +.|+++|... +. . .+..++.+++++++.+++..
T Consensus 264 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~~l~i~G~~~-~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~----- 334 (499)
T 2r60_A 264 AIIASSRLDQKKNHYGLVEAYVQNKELQDKA---NLVLTLRGIE-NPFEDYSRAGQEEKEILGKIIELIDNNDCR----- 334 (499)
T ss_dssp EEEECSCCCGGGCHHHHHHHHHTCHHHHHHC---EEEEEESSCS-BTTTBCTTSCHHHHHHHHHHHHHHHHTTCB-----
T ss_pred EEEEeecCccccCHHHHHHHHHHHHHhCCCc---eEEEEECCCC-CcccccccccccchHHHHHHHHHHHhcCCC-----
Confidence 9999999999999999999999998776652 3466665411 11 0 11223456677777665432
Q ss_pred cccEEEeCCCCCHHHHHHHHHHc----cEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECC
Q 003029 438 AVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP 511 (856)
Q Consensus 438 ~~pV~~~~g~v~~~el~aly~~A----Dv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP 511 (856)
..|+| .|.++.+++..+|+.| |++|+||.+||||++++|||||+ .|+|+|+.+|..+.+ |.+|++|+|
T Consensus 335 -~~V~~-~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G----~PvI~s~~~g~~e~v~~~~~g~l~~~ 408 (499)
T 2r60_A 335 -GKVSM-FPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASG----LPAVVTRNGGPAEILDGGKYGVLVDP 408 (499)
T ss_dssp -TTEEE-EECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTT----CCEEEESSBHHHHHTGGGTSSEEECT
T ss_pred -ceEEE-CCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcC----CCEEEecCCCHHHHhcCCceEEEeCC
Confidence 13664 8999999999999999 99999999999999999999994 899999999988888 447999999
Q ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHhHHh
Q 003029 512 WNITEVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVSELNDTVVE 565 (856)
Q Consensus 512 ~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~~l~~~~~~ 565 (856)
.|++++|++|.+++++ ++.+.++.+++++++.+ +++...++.+++.++++...
T Consensus 409 ~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~ 462 (499)
T 2r60_A 409 EDPEDIARGLLKAFES-EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADR 462 (499)
T ss_dssp TCHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 9999999999999985 45778888888998877 99999999999988877544
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4e-24 Score=242.75 Aligned_cols=295 Identities=18% Similarity=0.180 Sum_probs=214.2
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhh-hhcC----cc-cHHHH-HHhhcCCEEEEeCHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI-HRTL----PS-RSDLL-RAVLAADLVGFHTYDYARHFV 303 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~-fr~l----p~-~~~il-~~ll~aDlIgf~t~~~~~~Fl 303 (856)
..|+|++|++....++.++.+. .++++.+++|..++.... +... +. +..+. ..+-.+|.|.+.+....+.+.
T Consensus 122 ~~Div~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~ 200 (438)
T 3c48_A 122 TYDLIHSHYWLSGQVGWLLRDL-WRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLM 200 (438)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHH-HTCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHH
T ss_pred CCCEEEeCCccHHHHHHHHHHH-cCCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHH
Confidence 3799999987665555555443 368899999987532110 0000 00 11111 224468999999887666554
Q ss_pred HHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHH
Q 003029 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQ 380 (856)
Q Consensus 304 ~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~ 380 (856)
. .+|. ...++.++|+|||.+.|.+... .....+++++ .++++|+++||+.+.||++.
T Consensus 201 ~----~~g~-----------~~~k~~vi~ngvd~~~~~~~~~-----~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ 260 (438)
T 3c48_A 201 H----HYDA-----------DPDRISVVSPGADVELYSPGND-----RATERSRRELGIPLHTKVVAFVGRLQPFKGPQV 260 (438)
T ss_dssp H----HHCC-----------CGGGEEECCCCCCTTTSCCC---------CHHHHHHTTCCSSSEEEEEESCBSGGGCHHH
T ss_pred H----HhCC-----------ChhheEEecCCccccccCCccc-----chhhhhHHhcCCCCCCcEEEEEeeecccCCHHH
Confidence 3 2232 1346889999999988865321 1122355555 36789999999999999999
Q ss_pred HHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 003029 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (856)
Q Consensus 381 ~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~A 460 (856)
+|+|+..+.+++|+. ++.|+++|.+.. +++. .+++++++.+.+.. ..|. +.|.++.+++..+|+.|
T Consensus 261 li~a~~~l~~~~p~~--~~~l~i~G~~~~-~g~~----~~~l~~~~~~~~l~------~~v~-~~g~~~~~~~~~~~~~a 326 (438)
T 3c48_A 261 LIKAVAALFDRDPDR--NLRVIICGGPSG-PNAT----PDTYRHMAEELGVE------KRIR-FLDPRPPSELVAVYRAA 326 (438)
T ss_dssp HHHHHHHHHHHCTTC--SEEEEEECCBC-----------CHHHHHHHHTTCT------TTEE-EECCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhhCCCc--ceEEEEEeCCCC-CCcH----HHHHHHHHHHcCCC------CcEE-EcCCCChHHHHHHHHhC
Confidence 999999999998842 366888875321 1222 33455555543321 1366 47999999999999999
Q ss_pred cEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Q 003029 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 538 (856)
Q Consensus 461 Dv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~ 538 (856)
|++|+||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++|.|++++|++|.+++++ ++.+.++.++
T Consensus 327 dv~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~ 401 (438)
T 3c48_A 327 DIVAVPSFNESFGLVAMEAQASG----TPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDD-DETRIRMGED 401 (438)
T ss_dssp SEEEECCSCCSSCHHHHHHHHTT----CCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHC-HHHHHHHHHH
T ss_pred CEEEECccccCCchHHHHHHHcC----CCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcC-HHHHHHHHHH
Confidence 99999999999999999999994 899999999999988 4579999999999999999999995 4577788888
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHHhHHh
Q 003029 539 NFTHVTTHTAQEWAETFVSELNDTVVE 565 (856)
Q Consensus 539 ~~~~v~~~~~~~W~~~fl~~l~~~~~~ 565 (856)
+++++.++++...++.+++.++++...
T Consensus 402 ~~~~~~~~s~~~~~~~~~~~~~~~~~~ 428 (438)
T 3c48_A 402 AVEHARTFSWAATAAQLSSLYNDAIAN 428 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHhhh
Confidence 899998899999999999988877544
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=99.93 E-value=9.4e-24 Score=243.52 Aligned_cols=299 Identities=17% Similarity=0.194 Sum_probs=211.5
Q ss_pred CCCEEEEeCccchhHHHHHHhc-CCCCeEEEEEecCCCch----hhhhc--Ccc-------------cHHHHHHhhcCCE
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPSS----EIHRT--LPS-------------RSDLLRAVLAADL 290 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~-~~~~~i~~flH~PfP~~----e~fr~--lp~-------------~~~il~~ll~aDl 290 (856)
..|+||+|+++..+++.+++.. ..++|+.+++|..++.. ..+.. ++. ....-..+..+|.
T Consensus 130 ~~DiIh~~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 209 (485)
T 1rzu_A 130 RPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATA 209 (485)
T ss_dssp CCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSE
T ss_pred CCCEEEecccchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCE
Confidence 5799999999888888887764 46789999999975421 11111 110 1122233557999
Q ss_pred EEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcC-----------CchHHHHHHHHHH
Q 003029 291 VGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI-----------NPVQVHIKELQET 359 (856)
Q Consensus 291 Igf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~-----------~~~~~~~~~lr~~ 359 (856)
|...+....+.+... .+|... .. .+.....++.++|+|||.+.|.+.... +...+....++++
T Consensus 210 vi~~S~~~~~~~~~~---~~g~~~--~~-~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 283 (485)
T 1rzu_A 210 LSTVSPSYAEEILTA---EFGMGL--EG-VIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEH 283 (485)
T ss_dssp EEESCHHHHHHTTSH---HHHTTC--HH-HHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHH
T ss_pred EEecCHhHHHHHhcc---ccCcch--HH-HHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHh
Confidence 999888766654321 011000 00 000013468899999999988754211 0011123446666
Q ss_pred hc---C-CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCC
Q 003029 360 FA---G-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT 435 (856)
Q Consensus 360 ~~---~-~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~ 435 (856)
++ + +++|++|||+.+.||++.+|+|+..+.+ ++ +.|+++|.+ +. .+++.+++++.+.+.
T Consensus 284 ~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~----~~l~ivG~g-----~~--~~~~~l~~~~~~~~~---- 346 (485)
T 1rzu_A 284 FRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LG----GRLVVLGAG-----DV--ALEGALLAAASRHHG---- 346 (485)
T ss_dssp HTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TT----CEEEEEECB-----CH--HHHHHHHHHHHHTTT----
T ss_pred cCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cC----ceEEEEeCC-----ch--HHHHHHHHHHHhCCC----
Confidence 53 2 6799999999999999999999999876 23 568888742 21 234566666665431
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--c---------C
Q 003029 436 LTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G---------A 504 (856)
Q Consensus 436 ~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g---------~ 504 (856)
.|+++.|. +.+++..+|+.||++|+||.+||||++++|||||+ .|+|+|+.+|..+.+ | .
T Consensus 347 ----~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G----~PvI~s~~gg~~e~v~~~~~~~~~~~~~ 417 (485)
T 1rzu_A 347 ----RVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYG----CIPVVARTGGLADTVIDANHAALASKAA 417 (485)
T ss_dssp ----TEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHT----CEEEEESSHHHHHHCCBCCHHHHHTTCC
T ss_pred ----cEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCC----CCEEEeCCCChhheecccccccccccCC
Confidence 37756777 88889999999999999999999999999999994 999999999999988 4 5
Q ss_pred CeEEECCCCHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhH
Q 003029 505 GAILVNPWNITEVANAIARALN--MSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563 (856)
Q Consensus 505 ~g~lVnP~d~~~lA~ai~~aL~--~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 563 (856)
+|++|+|.|++++|++|.++++ ..++.+.++.+++++ +.+++...++.+++-++++.
T Consensus 418 ~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y~~~~ 476 (485)
T 1rzu_A 418 TGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQLI 476 (485)
T ss_dssp CBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHHT
T ss_pred cceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHHHHHHHhh
Confidence 7999999999999999999994 245566666666654 78999999999988887654
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=229.41 Aligned_cols=219 Identities=12% Similarity=0.126 Sum_probs=161.3
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeCce
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGM 670 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaenG~ 670 (856)
+|||++|+||||++....| ....++++++++|++|++ .| .|+|+|||++..+.++++.+ +++|++||+
T Consensus 1 ikli~~DlDGTLl~~~~~~---------~~~~i~~~~~~al~~l~~-~g-~v~iaTGR~~~~~~~~~~~l-~~~I~~nGa 68 (239)
T 1u02_A 1 MSLIFLDYDGTLVPIIMNP---------EESYADAGLLSLISDLKE-RF-DTYIVTGRSPEEISRFLPLD-INMICYHGA 68 (239)
T ss_dssp -CEEEEECBTTTBCCCSCG---------GGCCCCHHHHHHHHHHHH-HS-EEEEECSSCHHHHHHHSCSS-CEEEEGGGT
T ss_pred CeEEEEecCCCCcCCCCCc---------ccCCCCHHHHHHHHHHhc-CC-CEEEEeCCCHHHHHHHhccc-hheEEECCE
Confidence 4899999999999864322 245799999999999997 58 99999999999999999988 899999999
Q ss_pred EEEecCCeeee----cccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCC
Q 003029 671 FLRCTTGKWMT----TMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPI 746 (856)
Q Consensus 671 ~i~~~~~~w~~----~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~ 746 (856)
+|.. ++.+.. +....++ .+.+..+++... +.++.+++.++..+.++|+..++ +.....+.+.+.+ ...
T Consensus 69 ~i~~-~~~~~~~~~~~~~~~l~---~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l-~~~- 140 (239)
T 1u02_A 69 CSKI-NGQIVYNNGSDRFLGVF---DRIYEDTRSWVS-DFPGLRIYRKNLAVLYHLGLMGA-DMKPKLRSRIEEI-ARI- 140 (239)
T ss_dssp EEEE-TTEEEECTTGGGGHHHH---HHHHHHHTTHHH-HSTTCEEEEETTEEEEECTTSCS-TTHHHHHHHHHHH-HHH-
T ss_pred EEee-CCeeeecccccccchhh---HHHHHHHHHHHh-hCCCcEEEecCCEEEEEcCCCCh-hHHHHHHHHHHHH-hcc-
Confidence 9987 344321 1111111 234455555443 34677788888888888875432 1111123333333 211
Q ss_pred CCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC--C
Q 003029 747 SNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS--F 824 (856)
Q Consensus 747 ~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~--~ 824 (856)
..+.+.++..++||+|+++|||.|+++|+++++ ++|||| +.||++| |+++.. +.+|.|+|. .
T Consensus 141 --~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g-----------via~GD-~~ND~~M-l~~a~~-g~~vam~Na~~~ 204 (239)
T 1u02_A 141 --FGVETYYGKMIIELRVPGVNKGSAIRSVRGERP-----------AIIAGD-DATDEAA-FEANDD-ALTIKVGEGETH 204 (239)
T ss_dssp --HTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC-----------EEEEES-SHHHHHH-HHTTTT-SEEEEESSSCCC
T ss_pred --CCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC-----------eEEEeC-CCccHHH-HHHhhC-CcEEEECCCCCc
Confidence 135567788899999999999999999998752 899999 9999999 998754 889999885 2
Q ss_pred c-cccCC---HHHHHHHHHHHHHHH
Q 003029 825 L-HYLRM---KMCMRFLSQNYLMMA 845 (856)
Q Consensus 825 ~-~~l~~---~~~~~~~l~~~~~~~ 845 (856)
+ |.+.+ ...|.++|+.++...
T Consensus 205 A~~v~~~~~~~~gV~~~l~~~~~~~ 229 (239)
T 1u02_A 205 AKFHVADYIEMRKILKFIEMLGVQK 229 (239)
T ss_dssp CSEEESSHHHHHHHHHHHHHHHHHH
T ss_pred ceEEeCCCCCHHHHHHHHHHHHHhc
Confidence 3 88888 888999999998543
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-23 Score=234.18 Aligned_cols=281 Identities=18% Similarity=0.219 Sum_probs=210.0
Q ss_pred CCCEEEEeCccchh-HHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHH-hhcCCEEEEeCHHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMF-LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFVSACTR 308 (856)
Q Consensus 231 ~~DvIwvHDyhl~l-lp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~-ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (856)
..|+||+|+...+. +...++. ....++.+.+|...+ .+...+..+.+.+. +..+|.|.+.+....+.+..
T Consensus 86 ~~Dvv~~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~---~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~---- 157 (394)
T 3okp_A 86 EIDNVWFGAAAPLALMAGTAKQ-AGASKVIASTHGHEV---GWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKS---- 157 (394)
T ss_dssp TCSEEEESSCTTGGGGHHHHHH-TTCSEEEEECCSTHH---HHTTSHHHHHHHHHHHHHCSEEEESCHHHHHHHHH----
T ss_pred CCCEEEECCcchHHHHHHHHHh-cCCCcEEEEeccchh---hhhhcchhhHHHHHHHHhCCEEEEcCHHHHHHHHH----
Confidence 35999999876553 3334443 333458888896432 12222333333333 45789999999876665543
Q ss_pred HhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhc---CCceEEEeecccccCChHHHHHHH
Q 003029 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLDMIKGIPQKLLAF 385 (856)
Q Consensus 309 ~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~iIl~V~Rld~~KGi~~~L~Af 385 (856)
..+ ...++.++|+|||.+.|.+.. ......++++++ ++++|+++||+.+.||++.+++|+
T Consensus 158 ~~~------------~~~~~~vi~ngv~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~ 220 (394)
T 3okp_A 158 AFG------------SHPTFEHLPSGVDVKRFTPAT-----PEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAM 220 (394)
T ss_dssp HHC------------SSSEEEECCCCBCTTTSCCCC-----HHHHHHHHHHTTCCTTCCEEEEESCSCGGGCHHHHHHHH
T ss_pred hcC------------CCCCeEEecCCcCHHHcCCCC-----chhhHHHHHhcCCCcCceEEEEEeccccccCHHHHHHHH
Confidence 212 234789999999999886521 123455666663 558999999999999999999999
Q ss_pred HHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEE
Q 003029 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 465 (856)
Q Consensus 386 ~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~ 465 (856)
+.+.+++|+++ |+++|. ++.. +.+++++..++. .|.+ .|.++.+++..+|+.||++|+
T Consensus 221 ~~l~~~~~~~~----l~i~G~-----g~~~----~~l~~~~~~~~~--------~v~~-~g~~~~~~~~~~~~~ad~~v~ 278 (394)
T 3okp_A 221 PQVIAARPDAQ----LLIVGS-----GRYE----STLRRLATDVSQ--------NVKF-LGRLEYQDMINTLAAADIFAM 278 (394)
T ss_dssp HHHHHHSTTCE----EEEECC-----CTTH----HHHHHHTGGGGG--------GEEE-EESCCHHHHHHHHHHCSEEEE
T ss_pred HHHHhhCCCeE----EEEEcC-----chHH----HHHHHHHhcccC--------eEEE-cCCCCHHHHHHHHHhCCEEEe
Confidence 99999988754 777763 2322 334444322221 3664 789999999999999999999
Q ss_pred CCCC-------cCCChhHHHHHhhcCCCCceEEEeCCCCchhhccC-CeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHH
Q 003029 466 TSLR-------DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA-GAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (856)
Q Consensus 466 ~S~~-------EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~lg~-~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~ 537 (856)
||.. ||||++++|||||+ .|+|+|+.+|..+.+.. +|++++|.|++++|++|.+++++ ++.+.++.+
T Consensus 279 ps~~~~~~~~~e~~~~~~~Ea~a~G----~PvI~~~~~~~~e~i~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~ 353 (394)
T 3okp_A 279 PARTRGGGLDVEGLGIVYLEAQACG----VPVIAGTSGGAPETVTPATGLVVEGSDVDKLSELLIELLDD-PIRRAAMGA 353 (394)
T ss_dssp CCCCBGGGTBCCSSCHHHHHHHHTT----CCEEECSSTTGGGGCCTTTEEECCTTCHHHHHHHHHHHHTC-HHHHHHHHH
T ss_pred cCccccccccccccCcHHHHHHHcC----CCEEEeCCCChHHHHhcCCceEeCCCCHHHHHHHHHHHHhC-HHHHHHHHH
Confidence 9999 99999999999994 89999999999998822 89999999999999999999985 557788888
Q ss_pred HHHHHHHh-cCHHHHHHHHHHHHHHhH
Q 003029 538 HNFTHVTT-HTAQEWAETFVSELNDTV 563 (856)
Q Consensus 538 ~~~~~v~~-~~~~~W~~~fl~~l~~~~ 563 (856)
++++++.+ +++..+++.+++.+++..
T Consensus 354 ~~~~~~~~~~s~~~~~~~~~~~~~~~~ 380 (394)
T 3okp_A 354 AGRAHVEAEWSWEIMGERLTNILQSEP 380 (394)
T ss_dssp HHHHHHHHHTBHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 88888865 899999999999888754
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.9e-24 Score=260.82 Aligned_cols=311 Identities=12% Similarity=0.097 Sum_probs=214.7
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHH-------------HHHhhcCCEEEEeCHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL-------------LRAVLAADLVGFHTYD 297 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~i-------------l~~ll~aDlIgf~t~~ 297 (856)
..|+||.|++...+++.++++.. ++|++++.|...+.........| +.+ ...+-.||.|...+..
T Consensus 407 ~PDVIHsH~~~sglva~llar~~-gvP~V~T~Hsl~~~k~~~~~~~~-~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~ 484 (816)
T 3s28_A 407 KPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYW-KKLDDKYHFSCQFTADIFAMNHTDFIITSTFQ 484 (816)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHHH-TCCEEEECSCCHHHHSTTTTTTH-HHHHHHHCHHHHHHHHHHHHHHSSEEEESCHH
T ss_pred CCeEEEeCCchHHHHHHHHHHHc-CCCEEEEEecccccccccccchh-hhHHHHHHHHHHHHHHHHHHHhCCEEEECCHH
Confidence 57999999877766766666554 78999999975322111111111 011 1146689999988876
Q ss_pred HHHHHHHHHHHHhCccc---CCC------ceeeCCeeEEEEEeecccChhhhhhhhcCCc----hHHHHHHH-------H
Q 003029 298 YARHFVSACTRILGFEG---TPE------GVEDQGRLTRVAAFPIGIDSERFIRALEINP----VQVHIKEL-------Q 357 (856)
Q Consensus 298 ~~~~Fl~~~~~~lg~~~---~~~------~v~~~g~~~~v~viP~GID~~~f~~~~~~~~----~~~~~~~l-------r 357 (856)
..+.....+.. .+... .+. ++..... ++.++|+|||.+.|.+...... .......+ +
T Consensus 485 ~~~~l~~~~~~-y~~~~~~~~p~Lyr~~~gI~~~~~--ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r 561 (816)
T 3s28_A 485 EIAGSKETVGQ-YESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENK 561 (816)
T ss_dssp HHHCCSSSCCT-TGGGSSEEETTTEEEEESCCTTCT--TEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBT
T ss_pred HHHHHHHHHHH-hhhhhccccchhhhcccccccCCC--CEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHH
Confidence 55431110000 00000 000 1111111 7899999999999986542211 00111111 1
Q ss_pred HH-----hcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCC--CCChHHHHHHHHHHHHHHHHhh
Q 003029 358 ET-----FAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT--RTDVPEYQRLTSQVHEIVGRIN 430 (856)
Q Consensus 358 ~~-----~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~--r~~~~~~~~l~~~l~~lv~~IN 430 (856)
+. ..++++|++|||+++.||+..+++||..+.+.+|++ .|+++|.+. .....+..+..+++.+++.+.+
T Consensus 562 ~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v----~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lg 637 (816)
T 3s28_A 562 EHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELA----NLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYK 637 (816)
T ss_dssp TEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHC----EEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTT
T ss_pred HHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCe----EEEEEeCCCcccccchhhHHHHHHHHHHHHHcC
Confidence 11 136789999999999999999999999998877764 588887543 1122334445667777777654
Q ss_pred cccCCCCcccEEEeCC----CCCHHHHHHHHH-HccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--c
Q 003029 431 GRFGTLTAVPIHHLDR----SLDFPALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G 503 (856)
Q Consensus 431 ~~~g~~~~~pV~~~~g----~v~~~el~aly~-~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g 503 (856)
.. ..|.| .| .++.+++..+|+ +||+||+||.+||||++++||||| |.|+|+|+.+|..+.+ |
T Consensus 638 L~------~~V~f-lG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~----G~PVIasd~GG~~EiV~dg 706 (816)
T 3s28_A 638 LN------GQFRW-ISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTC----GLPTFATCKGGPAEIIVHG 706 (816)
T ss_dssp CB------BBEEE-ECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHT----TCCEEEESSBTHHHHCCBT
T ss_pred CC------CcEEE-ccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHc----CCCEEEeCCCChHHHHccC
Confidence 32 13665 56 445699999998 689999999999999999999999 4999999999999998 6
Q ss_pred CCeEEECCCCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHh
Q 003029 504 AGAILVNPWNITEVANAIARAL----NMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 504 ~~g~lVnP~d~~~lA~ai~~aL----~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~ 562 (856)
.+|++|+|.|++++|++|.+++ .++ +.+.++.+++++++ +.++|..+++++++-++..
T Consensus 707 ~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~-~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 707 KSGFHIDPYHGDQAADTLADFFTKCKEDP-SHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp TTBEEECTTSHHHHHHHHHHHHHHHHHCT-HHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred CcEEEeCCCCHHHHHHHHHHHHHHhccCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 7899999999999999998877 555 57888888999998 7899999999999877654
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8.4e-24 Score=238.85 Aligned_cols=280 Identities=21% Similarity=0.209 Sum_probs=201.4
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (856)
..|+|++|+++...+..+++. ..++.+++|..++.... ...+.+.+.+..+|.+.+.+.++.+.
T Consensus 126 ~~Dvv~~~~~~~~~~~~~~~~---~~p~v~~~h~~~~~~~~----~~~~~~~~~~~~~~~~i~~~s~~~~~--------- 189 (416)
T 2x6q_A 126 SFDYVLVHDPQPAALIEFYEK---KSPWLWRCHIDLSSPNR----EFWEFLRRFVEKYDRYIFHLPEYVQP--------- 189 (416)
T ss_dssp GSSEEEEESSTTGGGGGGSCC---CSCEEEECCSCCSSCCH----HHHHHHHHHHTTSSEEEESSGGGSCT---------
T ss_pred CCCEEEEeccchhhHHHHHHh---cCCEEEEEccccCCccH----HHHHHHHHHHHhCCEEEEechHHHHh---------
Confidence 469999999887766555443 27899999987653210 00111222234556655444332211
Q ss_pred CcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHHHHHHHHH
Q 003029 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEK 387 (856)
Q Consensus 311 g~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~~L~Af~~ 387 (856)
.+ ...++.++|+|||+..|.+... .......+++++ .++++|+++||+.+.||++.+|+|+..
T Consensus 190 -------~~----~~~~~~vi~ngvd~~~~~~~~~---~~~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~ 255 (416)
T 2x6q_A 190 -------EL----DRNKAVIMPPSIDPLSEKNVEL---KQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRK 255 (416)
T ss_dssp -------TS----CTTTEEECCCCBCTTSTTTSCC---CHHHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHH
T ss_pred -------hC----CccceEEeCCCCChhhhccccc---ChhhHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHHH
Confidence 11 1135779999999877654211 122345566666 367899999999999999999999999
Q ss_pred HHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCC---CCCHHHHHHHHHHccEEE
Q 003029 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR---SLDFPALCALYAVTDVAL 464 (856)
Q Consensus 388 ~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g---~v~~~el~aly~~ADv~v 464 (856)
+.+++|+++ |+++|.+.. +.+++ .+.+++++.+.+.. ..|.+ .| .++.+++..+|+.||++|
T Consensus 256 l~~~~~~~~----l~i~G~g~~-~~~~~---~~~l~~~~~~~~~~------~~V~~-~G~~~~~~~~~~~~~~~~ad~~v 320 (416)
T 2x6q_A 256 VKEKIPGVQ----LLLVGVMAH-DDPEG---WIYFEKTLRKIGED------YDVKV-LTNLIGVHAREVNAFQRASDVIL 320 (416)
T ss_dssp HHHHCTTCE----EEEEECCCT-TCHHH---HHHHHHHHHHHTTC------TTEEE-EEGGGTCCHHHHHHHHHHCSEEE
T ss_pred HHHhCCCeE----EEEEecCcc-cchhH---HHHHHHHHHHhCCC------CcEEE-ecccCCCCHHHHHHHHHhCCEEE
Confidence 999888754 887875432 11332 33445555554431 13665 55 456899999999999999
Q ss_pred ECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 003029 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (856)
Q Consensus 465 ~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~ 542 (856)
+||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++ |++++|++|.+++++ ++.+.++.++++++
T Consensus 321 ~ps~~E~~~~~~lEAma~G----~PvI~~~~~g~~e~i~~~~~g~l~~--d~~~la~~i~~ll~~-~~~~~~~~~~a~~~ 393 (416)
T 2x6q_A 321 QMSIREGFGLTVTEAMWKG----KPVIGRAVGGIKFQIVDGETGFLVR--DANEAVEVVLYLLKH-PEVSKEMGAKAKER 393 (416)
T ss_dssp ECCSSCSSCHHHHHHHHTT----CCEEEESCHHHHHHCCBTTTEEEES--SHHHHHHHHHHHHHC-HHHHHHHHHHHHHH
T ss_pred ECCCcCCCccHHHHHHHcC----CCEEEccCCCChhheecCCCeEEEC--CHHHHHHHHHHHHhC-HHHHHHHHHHHHHH
Confidence 9999999999999999994 899999999999888 56899997 999999999999985 45777788888888
Q ss_pred HH-hcCHHHHHHHHHHHHHHh
Q 003029 543 VT-THTAQEWAETFVSELNDT 562 (856)
Q Consensus 543 v~-~~~~~~W~~~fl~~l~~~ 562 (856)
+. .+++...++.+++.++++
T Consensus 394 ~~~~fs~~~~~~~~~~~~~~l 414 (416)
T 2x6q_A 394 VRKNFIITKHMERYLDILNSL 414 (416)
T ss_dssp HHHHTBHHHHHHHHHHHHHTC
T ss_pred HHHHcCHHHHHHHHHHHHHHh
Confidence 85 799999999998877653
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.8e-23 Score=233.09 Aligned_cols=283 Identities=14% Similarity=0.094 Sum_probs=203.9
Q ss_pred CCCEEEEeCccchhHHHHHHhc-CC-CCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCC--EEEEeCHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEY-NS-DMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAAD--LVGFHTYDYARHFVSAC 306 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~-~~-~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aD--lIgf~t~~~~~~Fl~~~ 306 (856)
..|+|++|.+...+.+.+.+.. .| ..++...+|...+... ..+...+..+| .|.+.+....+.+..
T Consensus 81 ~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ii~~S~~~~~~~~~-- 150 (413)
T 3oy2_A 81 KPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIR--------ENLWWIFSHPKVVGVMAMSKCWISDICN-- 150 (413)
T ss_dssp CCSEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBSCC--------GGGGGGGGCTTEEEEEESSTHHHHHHHH--
T ss_pred CCCEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchhhH--------HHHHHHHhccCCceEEEcCHHHHHHHHH--
Confidence 4599999955444433333322 22 3456666665443211 11222344577 888888765555432
Q ss_pred HHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---c--CCceEEEeecccccCChHHH
Q 003029 307 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---A--GRKVMLGVDRLDMIKGIPQK 381 (856)
Q Consensus 307 ~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~--~~~iIl~V~Rld~~KGi~~~ 381 (856)
++. ..++.++|+|||++.|.. .++++ . ++++|+++||+.+.||++.+
T Consensus 151 ---~~~------------~~~~~vi~ngvd~~~~~~-------------~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~l 202 (413)
T 3oy2_A 151 ---YGC------------KVPINIVSHFVDTKTIYD-------------ARKLVGLSEYNDDVLFLNMNRNTARKRLDIY 202 (413)
T ss_dssp ---TTC------------CSCEEECCCCCCCCCCTT-------------HHHHTTCGGGTTSEEEECCSCSSGGGTHHHH
T ss_pred ---cCC------------CCceEEeCCCCCHHHHHH-------------HHHhcCCCcccCceEEEEcCCCchhcCcHHH
Confidence 222 247889999999987721 12223 2 57899999999999999999
Q ss_pred HHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC-cccEEEeCCCCCHHHHHHHHHHc
Q 003029 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT-AVPIHHLDRSLDFPALCALYAVT 460 (856)
Q Consensus 382 L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~-~~pV~~~~g~v~~~el~aly~~A 460 (856)
|+||..+.+++|+++ |+++|.+..... ..+++.+++++.+.+..- ... +..|+++.|.++.+++..+|+.|
T Consensus 203 i~a~~~l~~~~~~~~----l~ivG~g~~~~~---~~l~~~~~~~~~~~~l~~-~v~~l~~vv~~~g~~~~~~~~~~~~~a 274 (413)
T 3oy2_A 203 VLAAARFISKYPDAK----VRFLCNSHHESK---FDLHSIALRELVASGVDN-VFTHLNKIMINRTVLTDERVDMMYNAC 274 (413)
T ss_dssp HHHHHHHHHHCTTCC----EEEEEECCTTCS---CCHHHHHHHHHHHHTCSC-HHHHHTTEEEECSCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCcE----EEEEeCCcccch---hhHHHHHHHHHHHcCccc-ccccccceeeccCcCCHHHHHHHHHhC
Confidence 999999999999875 777875432211 124455666665544320 000 00156679999999999999999
Q ss_pred cEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCC---------------eE--EECCCCHHHHHHHH
Q 003029 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAG---------------AI--LVNPWNITEVANAI 521 (856)
Q Consensus 461 Dv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~---------------g~--lVnP~d~~~lA~ai 521 (856)
|++|+||..||||++++|||||+ .|+|+|+.+|..+.+ +.+ |+ +++|.|++++|++|
T Consensus 275 dv~v~pS~~E~~~~~~lEAma~G----~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i 350 (413)
T 3oy2_A 275 DVIVNCSSGEGFGLCSAEGAVLG----KPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF 350 (413)
T ss_dssp SEEEECCSCCSSCHHHHHHHTTT----CCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH
T ss_pred CEEEeCCCcCCCCcHHHHHHHcC----CCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH
Confidence 99999999999999999999994 899999999999888 344 88 99999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHhHHh
Q 003029 522 ARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDTVVE 565 (856)
Q Consensus 522 ~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~~~~ 565 (856)
+++++ ++++.++.+++++++ +.++++.+++.+++.++++...
T Consensus 351 -~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 393 (413)
T 3oy2_A 351 -TFFKD-EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRV 393 (413)
T ss_dssp -HHTTS-HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC-
T ss_pred -HHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 99984 557788888899998 5789999999999999887543
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.8e-23 Score=231.74 Aligned_cols=279 Identities=18% Similarity=0.212 Sum_probs=201.3
Q ss_pred CCCEEEEeCccchhHHHHH-HhcC-CCCeEEEEEecCCCchhhhhcCcccHHHHH-HhhcCCEEEEeCHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCL-KEYN-SDMKVGWFLHTPFPSSEIHRTLPSRSDLLR-AVLAADLVGFHTYDYARHFVSACT 307 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~l-r~~~-~~~~i~~flH~PfP~~e~fr~lp~~~~il~-~ll~aDlIgf~t~~~~~~Fl~~~~ 307 (856)
..|+|++|......++.++ +... .+.|+.+++|...+ ..+..-+....+.+ .+-.+|.|...+....+.+..
T Consensus 99 ~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~--~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~--- 173 (394)
T 2jjm_A 99 NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI--TVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINETHE--- 173 (394)
T ss_dssp TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH--HTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHHHHH---
T ss_pred CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc--cccCCCHHHHHHHHHHHhhCCEEEECCHHHHHHHHH---
Confidence 3599999986654444443 3332 36899999997421 11111122223333 345799999988766655432
Q ss_pred HHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCCceEEEeecccccCChHHHHHH
Q 003029 308 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLA 384 (856)
Q Consensus 308 ~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~V~Rld~~KGi~~~L~A 384 (856)
..+ ...++.++|+|||++.|.+.. . ..+++++ .++++|+++||+.+.||+..+++|
T Consensus 174 -~~~------------~~~~~~vi~ngv~~~~~~~~~--~------~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a 232 (394)
T 2jjm_A 174 -LVK------------PNKDIQTVYNFIDERVYFKRD--M------TQLKKEYGISESEKILIHISNFRKVKRVQDVVQA 232 (394)
T ss_dssp -HTC------------CSSCEEECCCCCCTTTCCCCC--C------HHHHHHTTCC---CEEEEECCCCGGGTHHHHHHH
T ss_pred -hhC------------CcccEEEecCCccHHhcCCcc--h------HHHHHHcCCCCCCeEEEEeeccccccCHHHHHHH
Confidence 211 124688999999998886431 1 2344444 357899999999999999999999
Q ss_pred HHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 003029 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (856)
Q Consensus 385 f~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v 464 (856)
++.+.++ ++ +.|+++|. ++... ++++++.+.+.. ..|.+ .|. .+++..+|+.||++|
T Consensus 233 ~~~l~~~-~~----~~l~i~G~-----g~~~~----~l~~~~~~~~l~------~~v~~-~g~--~~~~~~~~~~adv~v 289 (394)
T 2jjm_A 233 FAKIVTE-VD----AKLLLVGD-----GPEFC----TILQLVKNLHIE------DRVLF-LGK--QDNVAELLAMSDLML 289 (394)
T ss_dssp HHHHHHS-SC----CEEEEECC-----CTTHH----HHHHHHHTTTCG------GGBCC-CBS--CSCTHHHHHTCSEEE
T ss_pred HHHHHhh-CC----CEEEEECC-----chHHH----HHHHHHHHcCCC------CeEEE-eCc--hhhHHHHHHhCCEEE
Confidence 9998776 33 45777763 23333 344444443311 12443 554 578999999999999
Q ss_pred ECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 003029 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (856)
Q Consensus 465 ~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~ 542 (856)
+||..||||++++|||||+ .|+|+|+.+|..+.+ |.+|++++|.|++++|++|.+++++ ++.+.++.++++++
T Consensus 290 ~ps~~e~~~~~~~EAma~G----~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~~~~~ 364 (394)
T 2jjm_A 290 LLSEKESFGLVLLEAMACG----VPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKD-EELHRNMGERARES 364 (394)
T ss_dssp ECCSCCSCCHHHHHHHHTT----CCEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHH
T ss_pred eccccCCCchHHHHHHhcC----CCEEEecCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHH
Confidence 9999999999999999994 899999999999988 5689999999999999999999985 45777888888998
Q ss_pred H-HhcCHHHHHHHHHHHHHHhH
Q 003029 543 V-TTHTAQEWAETFVSELNDTV 563 (856)
Q Consensus 543 v-~~~~~~~W~~~fl~~l~~~~ 563 (856)
+ ..+++...++.+++.++++.
T Consensus 365 ~~~~~s~~~~~~~~~~~~~~~~ 386 (394)
T 2jjm_A 365 VYEQFRSEKIVSQYETIYYDVL 386 (394)
T ss_dssp HHHHSCHHHHHHHHHHHHHHTC
T ss_pred HHHhCCHHHHHHHHHHHHHHHH
Confidence 8 88999999999999888764
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.5e-23 Score=230.98 Aligned_cols=275 Identities=17% Similarity=0.100 Sum_probs=209.3
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (856)
..|+|++|.+....++..+.+. .+.++.+++|..+|....+..+-.. +-..+-.+|.|.+.+....+.+.+ .+
T Consensus 107 ~~Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~--~~~~~~~~d~ii~~s~~~~~~~~~----~~ 179 (406)
T 2gek_A 107 DFDVLHIHEPNAPSLSMLALQA-AEGPIVATFHTSTTKSLTLSVFQGI--LRPYHEKIIGRIAVSDLARRWQME----AL 179 (406)
T ss_dssp CCSEEEEECCCSSSHHHHHHHH-EESSEEEEECCCCCSHHHHHHHHST--THHHHTTCSEEEESSHHHHHHHHH----HH
T ss_pred CCCEEEECCccchHHHHHHHHh-cCCCEEEEEcCcchhhhhHHHHHHH--HHHHHhhCCEEEECCHHHHHHHHH----hc
Confidence 4599999998877765555443 3688999999988765332211111 113456799999999766665543 12
Q ss_pred CcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecc-cccCChHHHHHHHHHHH
Q 003029 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL-DMIKGIPQKLLAFEKFL 389 (856)
Q Consensus 311 g~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rl-d~~KGi~~~L~Af~~~l 389 (856)
+ ..++ ++|+|||.+.|.+...... + -.++++|+++||+ .+.||+..+++|+..+.
T Consensus 180 ~-------------~~~~-vi~~~v~~~~~~~~~~~~~-------~---~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~ 235 (406)
T 2gek_A 180 G-------------SDAV-EIPNGVDVASFADAPLLDG-------Y---PREGRTVLFLGRYDEPRKGMAVLLAALPKLV 235 (406)
T ss_dssp S-------------SCEE-ECCCCBCHHHHHTCCCCTT-------C---SCSSCEEEEESCTTSGGGCHHHHHHHHHHHH
T ss_pred C-------------CCcE-EecCCCChhhcCCCchhhh-------c---cCCCeEEEEEeeeCccccCHHHHHHHHHHHH
Confidence 2 1367 9999999998875432110 0 1256899999999 99999999999999998
Q ss_pred HhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-
Q 003029 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL- 468 (856)
Q Consensus 390 ~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~- 468 (856)
+++|+++ |+++|. ++. ..+ ++++.++. ..|. +.|.++.+++..+|+.||++|+||.
T Consensus 236 ~~~~~~~----l~i~G~-----~~~-~~l----~~~~~~~~--------~~v~-~~g~~~~~~~~~~~~~adv~v~ps~~ 292 (406)
T 2gek_A 236 ARFPDVE----ILIVGR-----GDE-DEL----REQAGDLA--------GHLR-FLGQVDDATKASAMRSADVYCAPHLG 292 (406)
T ss_dssp TTSTTCE----EEEESC-----SCH-HHH----HHHTGGGG--------GGEE-ECCSCCHHHHHHHHHHSSEEEECCCS
T ss_pred HHCCCeE----EEEEcC-----CcH-HHH----HHHHHhcc--------CcEE-EEecCCHHHHHHHHHHCCEEEecCCC
Confidence 8888754 777763 232 333 33333321 1366 4899999999999999999999997
Q ss_pred CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc
Q 003029 469 RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 546 (856)
Q Consensus 469 ~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~ 546 (856)
.||||++++|||||+ .|+|+|+.+|..+.+ |.+|++++|.|+++++++|.+++++ ++.+.++.+++++++..+
T Consensus 293 ~e~~~~~~~Ea~a~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~ 367 (406)
T 2gek_A 293 GESFGIVLVEAMAAG----TAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILED-DQLRAGYVARASERVHRY 367 (406)
T ss_dssp CCSSCHHHHHHHHHT----CEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHGGGG
T ss_pred CCCCchHHHHHHHcC----CCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHhC
Confidence 999999999999994 899999999988888 4679999999999999999999985 457778888889998899
Q ss_pred CHHHHHHHHHHHHHHhHH
Q 003029 547 TAQEWAETFVSELNDTVV 564 (856)
Q Consensus 547 ~~~~W~~~fl~~l~~~~~ 564 (856)
++...++.+++.+++...
T Consensus 368 s~~~~~~~~~~~~~~~~~ 385 (406)
T 2gek_A 368 DWSVVSAQIMRVYETVSG 385 (406)
T ss_dssp BHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999998887653
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=8.1e-22 Score=230.06 Aligned_cols=313 Identities=12% Similarity=0.057 Sum_probs=205.2
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecC----C----CchhhhhcCc--------------ccHH-HHHHhhc
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTP----F----PSSEIHRTLP--------------SRSD-LLRAVLA 287 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~P----f----P~~e~fr~lp--------------~~~~-il~~ll~ 287 (856)
..||+|+||||..++|.+||+..++++.+|+.|.- + -..+++..+. ..-. .-.++..
T Consensus 181 ~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~~ 260 (725)
T 3nb0_A 181 HAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAHS 260 (725)
T ss_dssp EEEEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHHh
Confidence 46999999999999999999999999999999975 1 1111121111 0111 2334668
Q ss_pred CCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCC----chHHHHHH-HHHHh--
Q 003029 288 ADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEIN----PVQVHIKE-LQETF-- 360 (856)
Q Consensus 288 aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~----~~~~~~~~-lr~~~-- 360 (856)
||.|..-++.|++.-. .+++.. ...+ ||||||++.|.+..... +.++.++. ++..+
T Consensus 261 AD~ITTVS~~yA~Ei~----~Ll~r~-----------~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~ 323 (725)
T 3nb0_A 261 ADVFTTVSQITAFEAE----HLLKRK-----------PDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHG 323 (725)
T ss_dssp SSEEEESSHHHHHHHH----HHTSSC-----------CSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCEEEECCHHHHHHHH----HHhcCC-----------CCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhccc
Confidence 9999999888776533 344321 1233 99999999987631100 11111211 22222
Q ss_pred -----cCCceEEE-eeccc-ccCChHHHHHHHHHHHHhC--cCccCceEEEEEEcCCCCChHH-----HHHHHHHHHHHH
Q 003029 361 -----AGRKVMLG-VDRLD-MIKGIPQKLLAFEKFLEEN--SDWRGKVVLLQIAVPTRTDVPE-----YQRLTSQVHEIV 426 (856)
Q Consensus 361 -----~~~~iIl~-V~Rld-~~KGi~~~L~Af~~~l~~~--P~~~~~v~Lv~v~~p~r~~~~~-----~~~l~~~l~~lv 426 (856)
.+++++++ +||++ ..||++.+++|+.++...- ......|+-+ |..|+...... .+...+++++.+
T Consensus 324 ~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvaf-ii~p~~~~~~~~~~l~~~~~~~~l~~~~ 402 (725)
T 3nb0_A 324 CFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAF-IVMPAKNNSFTVEALKGQAEVRALENTV 402 (725)
T ss_dssp CCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEE-EECCCCEEEECHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEE-EEeCCCCCCCchhhhcchhHHHHHHHHH
Confidence 14566666 79999 5799999999999986431 1111223333 33455433321 111111111111
Q ss_pred H-----------------------------------------------------------------------------Hh
Q 003029 427 G-----------------------------------------------------------------------------RI 429 (856)
Q Consensus 427 ~-----------------------------------------------------------------------------~I 429 (856)
. ++
T Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l 482 (725)
T 3nb0_A 403 HEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQV 482 (725)
T ss_dssp HHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhc
Confidence 1 11
Q ss_pred hcccCCCCcccEEEeCCCCCHH------HHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc-
Q 003029 430 NGRFGTLTAVPIHHLDRSLDFP------ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL- 502 (856)
Q Consensus 430 N~~~g~~~~~pV~~~~g~v~~~------el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l- 502 (856)
+-.=...+...|+|+.+.++.. ++..+|+.||+||+||++||||++++||||| |.|+|+|+.+|+.+.+
T Consensus 483 ~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~----G~PvI~s~~gG~~d~V~ 558 (725)
T 3nb0_A 483 QLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVM----GVPSITTNVSGFGSYME 558 (725)
T ss_dssp TCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHT----TCCEEEETTBHHHHHHH
T ss_pred CCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHc----CCCEEEeCCCChhhhhh
Confidence 1000011234578888888876 5899999999999999999999999999999 4999999999998877
Q ss_pred -c-------CCeEEEC---CCCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHh
Q 003029 503 -G-------AGAILVN---PWNITEVANAIARAL----NMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565 (856)
Q Consensus 503 -g-------~~g~lVn---P~d~~~lA~ai~~aL----~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~ 565 (856)
+ .+|++|. |.|+++++++|.++| .+++.+|..+.++.++....++|..-++.+++.++.+...
T Consensus 559 dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 559 DLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKARQLALRR 636 (725)
T ss_dssp TTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 2 2588884 557776666666665 4677777777777777788999999999999988877543
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-22 Score=213.63 Aligned_cols=217 Identities=13% Similarity=0.131 Sum_probs=149.2
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcc-c---CceEE
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE-Y---NLWLA 665 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~-l---~lgli 665 (856)
++|||++|+||||+++ ...++++++++|++|.+ +|+.|+|+|||++..+.+.++. + ..++|
T Consensus 3 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~~l~~l~~-~g~~~~iaTGR~~~~~~~~l~~~~~~~~~~~i 67 (246)
T 3f9r_A 3 KRVLLLFDVDGTLTPP--------------RLCQTDEMRALIKRARG-AGFCVGTVGGSDFAKQVEQLGRDVLTQFDYVF 67 (246)
T ss_dssp CSEEEEECSBTTTBST--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHCTTHHHHCSEEE
T ss_pred CceEEEEeCcCCcCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHhhhhccccCCEEE
Confidence 5799999999999987 45789999999999997 7999999999999998888874 1 25899
Q ss_pred eeCceEEEecCCe-eeecccccCChHHHHHHHHHHHHHH-----hcCCCcEEeeecceEEEEe--ecCCh----hhhHHH
Q 003029 666 AENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFT-----ERTPRSHFEQRETSLVWNY--KYADV----EFGRIQ 733 (856)
Q Consensus 666 aenG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~-----~rt~gs~ie~k~~si~~~y--~~~d~----e~~~~q 733 (856)
++||+++...++. |...++..++.++...+.+.++.+. ....+.|++.+...+.+.. +.... ++....
T Consensus 68 ~~NGa~i~~~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (246)
T 3f9r_A 68 AENGLLAYRNGLEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVEYRNGMINVSPIGRNCSQAERDEFEVYD 147 (246)
T ss_dssp EGGGTEEEETTEEEEECCHHHHTCHHHHHHHHHHHHHHHHTCCCSCCCSCCEEECSSCEEECSSCTTSCHHHHHHHHHHH
T ss_pred ECCCcEEEECCEEEEEeeccccCCHHHHHHHHHHHHhhhhceeeecCCceEEEeecceeccccccccCchhhceeeeEec
Confidence 9999999875432 4433211134444555555544332 1234567776655444321 11111 111111
Q ss_pred -----HHHHHHHHhcCCCCCCCeE-EEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCC----ccc
Q 003029 734 -----ARDMLQHLWTGPISNASVE-VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL----GKN 803 (856)
Q Consensus 734 -----a~el~~~L~~~~~~~~~v~-v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~----~nD 803 (856)
..++.+.| .+.+.+..+. +.+|..++||+|+|+|||.|+++|++ . +++++|||| + .||
T Consensus 148 ~~~~~~~~~~~~l-~~~~~~~~~~~~~sg~~~leI~~~gv~Kg~al~~L~~--~--------~~ev~afGD-~~~~g~ND 215 (246)
T 3f9r_A 148 NEHRVRASLIAEL-ENSFPDFGLKYSIGGQISFDVFPVGWDKTYCLQFVED--D--------FEEIHFFGD-KTQEGGND 215 (246)
T ss_dssp HHHCHHHHHHHHH-HHHCGGGCEEEEEETTTEEEEEETTCSGGGGGGGTTT--T--------CSEEEEEES-CCSTTSTT
T ss_pred ccchHHHHHHHHH-HhhCcCCcEEEEecCCeEEEEEeCCCCHHHHHHHHHc--C--------cccEEEEeC-CCCCCCCC
Confidence 13344444 3223333365 45678999999999999999999987 3 689999999 8 999
Q ss_pred ccccccccccCcceEEeCCCCccccCCHHHHHHHHHHHHHH
Q 003029 804 CNLPLQFLMQTISTVRLDSSFLHYLRMKMCMRFLSQNYLMM 844 (856)
Q Consensus 804 e~M~f~~~~~~~~~v~V~~~~~~~l~~~~~~~~~l~~~~~~ 844 (856)
++| |++++. .++. +.++.+..+.|++++.|
T Consensus 216 i~M-l~~a~~--~g~~--------v~n~~~~~~~~~~~~~~ 245 (246)
T 3f9r_A 216 YEI-YTDKRT--IGHK--------VTSYKDTIAEVEKIIAM 245 (246)
T ss_dssp HHH-HTCTTS--EEEE--------CSSHHHHHHHHHHHHHT
T ss_pred HHH-HhCCCc--cEEE--------eCCHHHHHHHHHHHhcC
Confidence 999 997632 2333 35899999999998854
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.7e-22 Score=212.82 Aligned_cols=219 Identities=16% Similarity=0.147 Sum_probs=147.8
Q ss_pred HHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC-
Q 003029 583 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN- 661 (856)
Q Consensus 583 ~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~- 661 (856)
-..|...++|+|+||+||||+++. ...++++++++|++|.+ .|+.|+++|||+...+..+++.++
T Consensus 13 ~~~~~~~~~kli~~DlDGTLl~~~-------------~~~i~~~~~~al~~l~~-~G~~v~iaTGR~~~~~~~~~~~l~~ 78 (283)
T 3dao_A 13 ENLYFQGMIKLIATDIDGTLVKDG-------------SLLIDPEYMSVIDRLID-KGIIFVVCSGRQFSSEFKLFAPIKH 78 (283)
T ss_dssp ------CCCCEEEECCBTTTBSTT-------------CSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHTGGGGG
T ss_pred hhhhhccCceEEEEeCcCCCCCCC-------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 357888999999999999999872 22689999999999986 699999999999999999999884
Q ss_pred -ceEEeeCceEEEecCCe-eeecccccCChHHHHHHHHHHHHHHhcC----------CCcEEeee---------------
Q 003029 662 -LWLAAENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERT----------PRSHFEQR--------------- 714 (856)
Q Consensus 662 -lgliaenG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt----------~gs~ie~k--------------- 714 (856)
.++|+.||+.+...++. +. ..++. +.+.++++.+.+.. .+.+....
T Consensus 79 ~~~~I~~NGa~i~~~~~~i~~----~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (283)
T 3dao_A 79 KLLYITDGGTVVRTPKEILKT----YPMDE---DIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFE 151 (283)
T ss_dssp GCEEEETTTTEEECSSCEEEE----CCCCH---HHHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCC
T ss_pred CcEEEECCCcEEEECCEEEEE----ecCCH---HHHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCC
Confidence 58999999999864332 22 22343 33444444433221 11111100
Q ss_pred --------------cceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHH
Q 003029 715 --------------ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAE 779 (856)
Q Consensus 715 --------------~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v-~~g~~~vEV~p~gvnKG~av~~ll~~ 779 (856)
-..+.+.. +++......+.+.+.+ . ..+.+ ..+..++||.|+++|||.|+++++++
T Consensus 152 ~~~~~~l~~l~~~~~~ki~i~~---~~~~~~~~~~~l~~~~-~-----~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~ 222 (283)
T 3dao_A 152 MREVDDITRLDRNDIIKFTVFH---PDKCEELCTPVFIPAW-N-----KKAHLAAAGKEWVDCNAKGVSKWTALSYLIDR 222 (283)
T ss_dssp EEECSCGGGCCCSCCCEEEEEC---SSCHHHHHTTTHHHHH-T-----TTEEEEEETTTEEEEEETTCCHHHHHHHHHHH
T ss_pred ceEcCCHHHcCccCceEEEEEc---ChHHHHHHHHHHHHHh-c-----CCEEEEEecCceEEEeeCCCcHHHHHHHHHHH
Confidence 00000000 0110011112233333 1 23554 45788999999999999999999999
Q ss_pred hCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHHH--HHHHHHHHH
Q 003029 780 IVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKMC--MRFLSQNYL 842 (856)
Q Consensus 780 l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~~--~~~~l~~~~ 842 (856)
+| +++++++|||| +.||++| |+++ +.+|.++|.. + |-..+.++ |.+.|+++|
T Consensus 223 lg------i~~~e~ia~GD-~~NDi~m-l~~a---g~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~~~l 283 (283)
T 3dao_A 223 FD------LLPDEVCCFGD-NLNDIEM-LQNA---GISYAVSNARQEVIAAAKHTCAPYWENGVLSVLKSFL 283 (283)
T ss_dssp TT------CCGGGEEEEEC-SGGGHHH-HHHS---SEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHHHTC
T ss_pred hC------CCHHHEEEECC-CHHHHHH-HHhC---CCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHHHhC
Confidence 99 67899999999 9999999 8877 5899998863 2 66666665 888887763
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.88 E-value=3.4e-21 Score=195.07 Aligned_cols=190 Identities=21% Similarity=0.220 Sum_probs=150.5
Q ss_pred eecccChhhhh--hhhcCCchHHHHHHHHHHhc--CCceEEEeeccc-ccCChHHHHHHHHHHH--HhCcCccCceEEEE
Q 003029 331 FPIGIDSERFI--RALEINPVQVHIKELQETFA--GRKVMLGVDRLD-MIKGIPQKLLAFEKFL--EENSDWRGKVVLLQ 403 (856)
Q Consensus 331 iP~GID~~~f~--~~~~~~~~~~~~~~lr~~~~--~~~iIl~V~Rld-~~KGi~~~L~Af~~~l--~~~P~~~~~v~Lv~ 403 (856)
+|+|||++.|. +.. ....+....++++++ ++++|+++||+. +.||+..+++|+..+. +++|+ +.|++
T Consensus 2 ipngvd~~~f~~~~~~--~~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~----~~l~i 75 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLT--GSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFII 75 (200)
T ss_dssp ---CCCTTTSSGGGSC--SCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGG----EEEEE
T ss_pred CCCccChhhccccccc--cchhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCC----eEEEE
Confidence 69999999997 532 112223455677764 677999999999 9999999999999997 77776 45877
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhc
Q 003029 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (856)
Q Consensus 404 v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~ 483 (856)
+|.. + ....+++++++.+.+ .|+++.|.++.+++..+|+.||++|+||..||||++++|||||+
T Consensus 76 ~G~~-----~--~~~~~~l~~~~~~~~---------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G 139 (200)
T 2bfw_A 76 IGKG-----D--PELEGWARSLEEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG 139 (200)
T ss_dssp ECCB-----C--HHHHHHHHHHHHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTT
T ss_pred ECCC-----C--hHHHHHHHHHHHhcC---------CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCC
Confidence 7642 2 012345555555433 26644899999999999999999999999999999999999994
Q ss_pred CCCCceEEEeCCCCchhhc-cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc
Q 003029 484 DLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 546 (856)
Q Consensus 484 ~~~~g~lVlSe~aG~~~~l-g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~ 546 (856)
.|+|+|..+|..+.+ +.+|++++|.|+++++++|.++++|.++++.++.+++++++.+|
T Consensus 140 ----~PvI~~~~~~~~e~~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~f 199 (200)
T 2bfw_A 140 ----AIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSF 199 (200)
T ss_dssp ----CEEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred ----CCEEEeCCCChHHHcCCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc
Confidence 899999999999988 77899999999999999999999967778888888888887654
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-21 Score=213.93 Aligned_cols=239 Identities=14% Similarity=0.011 Sum_probs=182.4
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (856)
..|+|++|.++...+. .+..+.+ .+++|..++... .+|.|.+.+....+.+..
T Consensus 84 ~~Dvi~~~~~~~~~~~----~~~~~~p-v~~~h~~~~~~~----------------~~d~ii~~S~~~~~~~~~------ 136 (342)
T 2iuy_A 84 DVDVVHDHSGGVIGPA----GLPPGTA-FISSHHFTTRPV----------------NPVGCTYSSRAQRAHCGG------ 136 (342)
T ss_dssp CCSEEEECSSSSSCST----TCCTTCE-EEEEECSSSBCS----------------CCTTEEESCHHHHHHTTC------
T ss_pred CCCEEEECCchhhHHH----HhhcCCC-EEEecCCCCCcc----------------cceEEEEcCHHHHHHHhc------
Confidence 4699999997765432 3345778 889999876321 188888888655443321
Q ss_pred CcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHH
Q 003029 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (856)
Q Consensus 311 g~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~ 390 (856)
..++.++|+|||++.|.+... ...++++|+++||+.+.||++.+++|++.+
T Consensus 137 --------------~~~~~vi~ngvd~~~~~~~~~-------------~~~~~~~i~~vG~~~~~Kg~~~li~a~~~~-- 187 (342)
T 2iuy_A 137 --------------GDDAPVIPIPVDPARYRSAAD-------------QVAKEDFLLFMGRVSPHKGALEAAAFAHAC-- 187 (342)
T ss_dssp --------------CTTSCBCCCCBCGGGSCCSTT-------------CCCCCSCEEEESCCCGGGTHHHHHHHHHHH--
T ss_pred --------------CCceEEEcCCCChhhcCcccc-------------cCCCCCEEEEEeccccccCHHHHHHHHHhc--
Confidence 135678999999988865321 123567899999999999999999999886
Q ss_pred hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC--
Q 003029 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-- 468 (856)
Q Consensus 391 ~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~-- 468 (856)
+ +.|+++|.+ +.. +.+++++.+++. .|+| .|.++.+++..+|+.||++|+||.
T Consensus 188 ---~----~~l~i~G~g-----~~~----~~l~~~~~~~~~--------~v~~-~g~~~~~~l~~~~~~adv~v~ps~~~ 242 (342)
T 2iuy_A 188 ---G----RRLVLAGPA-----WEP----EYFDEITRRYGS--------TVEP-IGEVGGERRLDLLASAHAVLAMSQAV 242 (342)
T ss_dssp ---T----CCEEEESCC-----CCH----HHHHHHHHHHTT--------TEEE-CCCCCHHHHHHHHHHCSEEEECCCCC
T ss_pred ---C----cEEEEEeCc-----ccH----HHHHHHHHHhCC--------CEEE-eccCCHHHHHHHHHhCCEEEECCccc
Confidence 3 447777642 222 233444444331 3664 899999999999999999999999
Q ss_pred --------CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc----cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHH
Q 003029 469 --------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----GAGAILVNPWNITEVANAIARALNMSPEEREKRH 536 (856)
Q Consensus 469 --------~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l----g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~ 536 (856)
.||||++++|||||+ .|+|+|+.+|..+.+ |.+|++++| |++++|++|.++++ .
T Consensus 243 ~~~~~~~~~E~~~~~~~EAma~G----~PvI~s~~~~~~e~~~~~~~~~g~~~~~-d~~~l~~~i~~l~~---------~ 308 (342)
T 2iuy_A 243 TGPWGGIWCEPGATVVSEAAVSG----TPVVGTGNGCLAEIVPSVGEVVGYGTDF-APDEARRTLAGLPA---------S 308 (342)
T ss_dssp CCTTCSCCCCCCCHHHHHHHHTT----CCEEECCTTTHHHHGGGGEEECCSSSCC-CHHHHHHHHHTSCC---------H
T ss_pred ccccccccccCccHHHHHHHhcC----CCEEEcCCCChHHHhcccCCCceEEcCC-CHHHHHHHHHHHHH---------H
Confidence 899999999999994 999999999999988 347999999 99999999999987 3
Q ss_pred HHHHHHH-HhcCHHHHHHHHHHHHHHhHH
Q 003029 537 WHNFTHV-TTHTAQEWAETFVSELNDTVV 564 (856)
Q Consensus 537 ~~~~~~v-~~~~~~~W~~~fl~~l~~~~~ 564 (856)
+++++++ +.+++...++.+++.++++..
T Consensus 309 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 337 (342)
T 2iuy_A 309 DEVRRAAVRLWGHVTIAERYVEQYRRLLA 337 (342)
T ss_dssp HHHHHHHHHHHBHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHc
Confidence 3445555 788999999999988887654
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.86 E-value=9.6e-21 Score=205.93 Aligned_cols=218 Identities=13% Similarity=0.217 Sum_probs=152.9
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChh-HHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEE
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPD-LKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLA 665 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~-~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgli 665 (856)
..+|+|+||+||||++. ...++++ ++++|++|.+ +|+.|+++|||+...+.+++..++ .++|
T Consensus 35 M~iKli~fDlDGTLld~--------------~~~i~~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i 99 (304)
T 3l7y_A 35 MSVKVIATDMDGTFLNS--------------KGSYDHNRFQRILKQLQE-RDIRFVVASSNPYRQLREHFPDCHEQLTFV 99 (304)
T ss_dssp -CCSEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHHH-TTCEEEEECSSCHHHHHTTCTTTGGGSEEE
T ss_pred eeeEEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHhCCCCcEE
Confidence 46899999999999987 3568888 8999999986 699999999999999999998874 6899
Q ss_pred eeCceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCC----------cEEeee---------------------
Q 003029 666 AENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPR----------SHFEQR--------------------- 714 (856)
Q Consensus 666 aenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~g----------s~ie~k--------------------- 714 (856)
++||+.+...++.... ..++. +.+.++++.+.+..++ .++...
T Consensus 100 ~~nGa~i~~~~~~i~~---~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (304)
T 3l7y_A 100 GENGANIISKNQSLIE---VFQQR---EDIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNS 173 (304)
T ss_dssp EGGGTEEEETTEEEEE---CCCCH---HHHHHHHHHHHHHCTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESC
T ss_pred eCCCcEEEECCEEEEE---ecCCH---HHHHHHHHHHHHhcCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCC
Confidence 9999999754333211 12342 3445555544332111 111100
Q ss_pred ------cceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCC
Q 003029 715 ------ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMK 787 (856)
Q Consensus 715 ------~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~-g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~ 787 (856)
.....+.... +++ ...++.+.+ ...+....+.++. +..++||.|+++|||.|++++++++|
T Consensus 174 l~~~~~~~~~ki~~~~-~~~----~~~~~~~~l-~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lg------ 241 (304)
T 3l7y_A 174 FSPLPDERFFKLTLQV-KEE----ESAQIMKAI-ADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWN------ 241 (304)
T ss_dssp CSSCC-CCEEEEEEEC-CGG----GHHHHHHHH-HTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHTT------
T ss_pred HHHcCcCCeEEEEEEc-CHH----HHHHHHHHH-HHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhC------
Confidence 0000000000 111 123455555 4333322366554 67899999999999999999999999
Q ss_pred CCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHHH--HHHHHHHHHHH
Q 003029 788 TAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKMC--MRFLSQNYLMM 844 (856)
Q Consensus 788 ~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~~--~~~~l~~~~~~ 844 (856)
+++++++|||| +.||++| |+.+ +++|.++|.. + |-..+.++ |.+.|++++..
T Consensus 242 i~~~e~i~~GD-s~NDi~m-~~~a---g~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~~~~ 302 (304)
T 3l7y_A 242 FTSDHLMAFGD-GGNDIEM-LKLA---KYSYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLAS 302 (304)
T ss_dssp CCGGGEEEEEC-SGGGHHH-HHHC---TEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHHHC
T ss_pred cCHHHEEEECC-CHHHHHH-HHhc---CCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHHHHHHh
Confidence 67899999999 9999999 8876 5889998852 3 77777777 99999998754
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-21 Score=209.63 Aligned_cols=222 Identities=15% Similarity=0.194 Sum_probs=143.6
Q ss_pred HHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC-
Q 003029 583 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN- 661 (856)
Q Consensus 583 ~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~- 661 (856)
-.+|+.+++|+|+||+||||+++ ...++++++++|++|.+ +|+.|+|+|||+...+..+++.++
T Consensus 13 ~~~~~~~~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~v~iaTGR~~~~~~~~~~~l~~ 77 (285)
T 3pgv_A 13 ENLYFQGMYQVVASDLDGTLLSP--------------DHFLTPYAKETLKLLTA-RGINFVFATGRHYIDVGQIRDNLGI 77 (285)
T ss_dssp --------CCEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHHT-TTCEEEEECSSCGGGGHHHHHHHCS
T ss_pred ccccccCcceEEEEeCcCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHhcCC
Confidence 36799999999999999999987 45789999999999985 799999999999999999998885
Q ss_pred -ceEEeeCceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCc----------EEeeecce-------------
Q 003029 662 -LWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRS----------HFEQRETS------------- 717 (856)
Q Consensus 662 -lgliaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs----------~ie~k~~s------------- 717 (856)
.++|++||+.+...++... ....++ .+.+.++++.+.. ..+. +.......
T Consensus 78 ~~~~I~~nGa~i~~~~~~~l--~~~~l~---~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (285)
T 3pgv_A 78 RSYMITSNGARVHDSDGQQI--FAHNLD---RDIAADLFEIVRN-DPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYK 151 (285)
T ss_dssp CCEEEEGGGTEEECTTSCEE--EECCCC---HHHHHHHTTTTTT-CTTCEEEEEETTEEEESSCC-----CTTSCCCCEE
T ss_pred CccEEEcCCeEEECCCCCEE--EecCCC---HHHHHHHHHHHhh-cCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccE
Confidence 4789999999985333321 112233 3445555552211 1111 11000000
Q ss_pred ------------EEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCC
Q 003029 718 ------------LVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSK 784 (856)
Q Consensus 718 ------------i~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~ 784 (856)
..+.+...+++......+.+.+.+ . ..+.++ .+..++||.|+++|||.|+++|++++|
T Consensus 152 ~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~-~-----~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lg--- 222 (285)
T 3pgv_A 152 LYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARW-G-----DRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLG--- 222 (285)
T ss_dssp ECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHH-G-----GGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTT---
T ss_pred EecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHh-c-----CCEEEEEeCCceEEEecCCCChHHHHHHHHHHhC---
Confidence 000011112221111112222222 1 135544 467899999999999999999999999
Q ss_pred cCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-c--ccCC--HHHHHHHHHHHH
Q 003029 785 KMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-H--YLRM--KMCMRFLSQNYL 842 (856)
Q Consensus 785 ~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~--~l~~--~~~~~~~l~~~~ 842 (856)
+++++++|||| +.||++| |+.+ +.+|.++|.. + | -..+ -.-|.+.|++++
T Consensus 223 ---i~~~~~ia~GD-~~NDi~m-l~~a---g~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~~~~ 283 (285)
T 3pgv_A 223 ---YTLSDCIAFGD-GMNDAEM-LSMA---GKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLRKLY 283 (285)
T ss_dssp ---CCGGGEEEEEC-SGGGHHH-HHHS---SEEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHHHHH
T ss_pred ---CCHHHEEEECC-cHhhHHH-HHhc---CCEEEccCCCHHHHHhCCCCEecccCCcchHHHHHHHHh
Confidence 67899999999 9999999 8877 6899998862 2 3 2333 344888888875
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5e-22 Score=219.92 Aligned_cols=228 Identities=14% Similarity=0.161 Sum_probs=177.3
Q ss_pred cCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCC
Q 003029 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGR 363 (856)
Q Consensus 287 ~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~ 363 (856)
.+|.|.+.+....+.+.+ .+|. ...++.++|+|||.+.|.+....+ ....+++++ .++
T Consensus 136 ~~d~ii~~s~~~~~~~~~----~~~~-----------~~~~~~vi~ngv~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 196 (374)
T 2iw1_A 136 KSTKLMMLTDKQIADFQK----HYQT-----------EPERFQILPPGIYPDRKYSEQIPN----SREIYRQKNGIKEQQ 196 (374)
T ss_dssp CCCEEEESCHHHHHHHHH----HHCC-----------CGGGEEECCCCCCGGGSGGGSCTT----HHHHHHHHTTCCTTC
T ss_pred CCcEEEEcCHHHHHHHHH----HhCC-----------ChhheEEecCCcCHHhcCcccchh----HHHHHHHHhCCCCCC
Confidence 589999998877666643 2232 234688999999999887653221 234466666 367
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHh-CcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 003029 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEE-NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (856)
Q Consensus 364 ~iIl~V~Rld~~KGi~~~L~Af~~~l~~-~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~ 442 (856)
++|+++||+.+.||+..+++|+..+.++ +|+ +.|+++|.+. + ..+ ++++.+.+.. ..|.
T Consensus 197 ~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G~g~-----~-~~~----~~~~~~~~~~------~~v~ 256 (374)
T 2iw1_A 197 NLLLQVGSDFGRKGVDRSIEALASLPESLRHN----TLLFVVGQDK-----P-RKF----EALAEKLGVR------SNVH 256 (374)
T ss_dssp EEEEEECSCTTTTTHHHHHHHHHTSCHHHHHT----EEEEEESSSC-----C-HHH----HHHHHHHTCG------GGEE
T ss_pred eEEEEeccchhhcCHHHHHHHHHHhHhccCCc----eEEEEEcCCC-----H-HHH----HHHHHHcCCC------CcEE
Confidence 8999999999999999999999998776 455 4588776422 1 223 3344333211 1366
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEEC-CCCHHHHHH
Q 003029 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVN-PWNITEVAN 519 (856)
Q Consensus 443 ~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVn-P~d~~~lA~ 519 (856)
+ .|. .+++..+|+.||++|+||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++ |.|++++|+
T Consensus 257 ~-~g~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~ 329 (374)
T 2iw1_A 257 F-FSG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAG----LPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNE 329 (374)
T ss_dssp E-ESC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHT----CCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHH
T ss_pred E-CCC--cccHHHHHHhcCEEEeccccCCcccHHHHHHHCC----CCEEEecCCCchhhhccCCceEEeCCCCCHHHHHH
Confidence 5 554 4789999999999999999999999999999994 899999999999888 57899998 999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 003029 520 AIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (856)
Q Consensus 520 ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 561 (856)
+|.+++++ ++.+.++.+++++++.++++..|++.+.+.++.
T Consensus 330 ~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 330 VLRKALTQ-SPLRMAWAENARHYADTQDLYSLPEKAADIITG 370 (374)
T ss_dssp HHHHHHHC-HHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHC
T ss_pred HHHHHHcC-hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999985 557888888899999999999999988887764
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=3e-20 Score=199.78 Aligned_cols=221 Identities=14% Similarity=0.226 Sum_probs=153.3
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEee
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAE 667 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliae 667 (856)
++|+|+||+||||+++ ...++++++++|++|.+ +|+.|+++|||+...+..++..++ .++|++
T Consensus 5 ~~kli~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~ 69 (290)
T 3dnp_A 5 SKQLLALNIDGALLRS--------------NGKIHQATKDAIEYVKK-KGIYVTLVTNRHFRSAQKIAKSLKLDAKLITH 69 (290)
T ss_dssp -CCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEG
T ss_pred cceEEEEcCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCCeEEEc
Confidence 5799999999999987 45689999999999986 699999999999999999888885 389999
Q ss_pred CceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEE-------------------------EEe
Q 003029 668 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLV-------------------------WNY 722 (856)
Q Consensus 668 nG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~-------------------------~~y 722 (856)
||+.+....+.+... ..++ .+.+.++++.+.+......+........ ..+
T Consensus 70 nGa~i~~~~~~~~~~--~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (290)
T 3dnp_A 70 SGAYIAEKIDAPFFE--KRIS---DDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFV 144 (290)
T ss_dssp GGTEEESSTTSCSEE--CCCC---HHHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEEC
T ss_pred CCeEEEcCCCCEEEe--cCCC---HHHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhcccccccccccccc
Confidence 999998522322111 1233 4566677766654321111111110000 000
Q ss_pred e------------------cCChhhhHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcC
Q 003029 723 K------------------YADVEFGRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHS 783 (856)
Q Consensus 723 ~------------------~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~ 783 (856)
. ..+++. ..++.+.+ .... ..+.++ .+..++||.|+++|||.|++++++++|
T Consensus 145 ~~~~~~~~~~~~~~~ki~~~~~~~~----~~~~~~~l-~~~~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lg-- 215 (290)
T 3dnp_A 145 ESLSDLLMDEPVSAPVIEVYTEHDI----QHDITETI-TKAF--PAVDVIRVNDEKLNIVPKGVSKEAGLALVASELG-- 215 (290)
T ss_dssp SCHHHHHHHSCCCCSEEEEECCGGG----HHHHHHHH-HHHC--TTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTT--
T ss_pred CCHHHHHhcCCCCceEEEEeCCHHH----HHHHHHHH-HhhC--CcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcC--
Confidence 0 001111 12222332 1111 245544 468899999999999999999999999
Q ss_pred CcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHHH--HHHHHHHHHHHHHhc
Q 003029 784 KKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKMC--MRFLSQNYLMMARAF 848 (856)
Q Consensus 784 ~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~~--~~~~l~~~~~~~~~~ 848 (856)
+++++++|||| +.||++| |+++ +++|.++|.. + |-..+..+ |.+.|++++..-.+-
T Consensus 216 ----i~~~~~i~~GD-~~NDi~m-~~~a---g~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~~~~~~~~~ 280 (290)
T 3dnp_A 216 ----LSMDDVVAIGH-QYDDLPM-IELA---GLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFRMQQRK 280 (290)
T ss_dssp ----CCGGGEEEEEC-SGGGHHH-HHHS---SEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHHHHHHHHHHC
T ss_pred ----CCHHHEEEECC-chhhHHH-HHhc---CCEEEecCCcHHHHHhcCEECCCCCccHHHHHHHHHHHhcCcc
Confidence 67899999999 9999999 8876 6899998863 2 77777776 999999998765443
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.5e-20 Score=199.24 Aligned_cols=221 Identities=13% Similarity=0.110 Sum_probs=145.3
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC-----ce
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN-----LW 663 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-----lg 663 (856)
.++|+|+||+||||+++ ...++++++++|++|.+ +|+.|+++|||+...+.+++..++ .+
T Consensus 3 M~~kli~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~ 67 (279)
T 4dw8_A 3 LKYKLIVLDLDGTLTNS--------------KKEISSRNRETLIRIQE-QGIRLVLASGRPTYGIVPLANELRMNEFGGF 67 (279)
T ss_dssp -CCCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTTGGGTTCE
T ss_pred CcceEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHhCCCCCCCE
Confidence 35799999999999987 45689999999999986 699999999999999999988875 47
Q ss_pred EEeeCceEEEec-CCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEE----------------EEeecCC
Q 003029 664 LAAENGMFLRCT-TGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLV----------------WNYKYAD 726 (856)
Q Consensus 664 liaenG~~i~~~-~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~----------------~~y~~~d 726 (856)
+|++||+.+... ++.... ...++.+. +.++++.+.+..-...+...+.... ..+...+
T Consensus 68 ~i~~nGa~i~~~~~~~~~~--~~~l~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (279)
T 4dw8_A 68 ILSYNGGEIINWESKEMMY--ENVLPNEV---VPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETN 142 (279)
T ss_dssp EEEGGGTEEEETTTCCEEE--ECCCCGGG---HHHHHHHHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECS
T ss_pred EEEeCCeEEEECCCCeEEE--EecCCHHH---HHHHHHHHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHH
Confidence 999999999852 222111 12233333 3344443332211111111000000 0000000
Q ss_pred hhh---------------hHHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCc
Q 003029 727 VEF---------------GRIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAI 790 (856)
Q Consensus 727 ~e~---------------~~~qa~el~~~L~~~~~~~~~v~v-~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~ 790 (856)
++ ......++.+.+ .+.+. ..+.+ ..+..++||.|+++|||.|++++++++| +++
T Consensus 143 -~~~~~~~~~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lg------i~~ 213 (279)
T 4dw8_A 143 -DFLTDITLPVAKCLIVGDAGKLIPVESEL-CIRLQ-GKINVFRSEPYFLELVPQGIDKALSLSVLLENIG------MTR 213 (279)
T ss_dssp -CHHHHSCSCCSCEEEESCHHHHHHHHHHH-HHHTT-TTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHT------CCG
T ss_pred -HHHHhhcCCceEEEEeCCHHHHHHHHHHH-HHHhc-CCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcC------CCH
Confidence 00 011223333444 21111 13454 4568899999999999999999999999 678
Q ss_pred ceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHH--HHHHHHHHHHH
Q 003029 791 DYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKM--CMRFLSQNYLM 843 (856)
Q Consensus 791 d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~--~~~~~l~~~~~ 843 (856)
++++|||| +.||++| |+.+ +++|.+++.. + |-..+.+ -|.+.|++++.
T Consensus 214 ~~~i~~GD-~~NDi~m-~~~a---g~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~ 270 (279)
T 4dw8_A 214 EEVIAIGD-GYNDLSM-IKFA---GMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIERIFN 270 (279)
T ss_dssp GGEEEEEC-SGGGHHH-HHHS---SEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHC-
T ss_pred HHEEEECC-ChhhHHH-HHHc---CcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHHHHh
Confidence 99999999 9999999 8876 5899998852 2 6565544 38888887763
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=99.84 E-value=9.3e-21 Score=199.67 Aligned_cols=206 Identities=16% Similarity=0.196 Sum_probs=128.7
Q ss_pred hcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcc-c---Cce
Q 003029 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE-Y---NLW 663 (856)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~-l---~lg 663 (856)
.+++|||++|+||||+++ +..++++++++|++|++ + +.|+|+|||+...+.+.++. + ..+
T Consensus 3 ~~~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~ 66 (246)
T 2amy_A 3 APGPALCLFDVDGTLTAP--------------RQKITKEMDDFLQKLRQ-K-IKIGVVGGSDFEKVQEQLGNDVVEKYDY 66 (246)
T ss_dssp -CCSEEEEEESBTTTBCT--------------TSCCCHHHHHHHHHHTT-T-SEEEEECSSCHHHHHHHHCTTHHHHCSE
T ss_pred CCCceEEEEECCCCcCCC--------------CcccCHHHHHHHHHHHh-C-CeEEEEcCCCHHHHHHHhccccccccCE
Confidence 356899999999999987 45689999999999986 6 99999999999888877762 2 247
Q ss_pred EEeeCceEEEecCCe-eeecccccCChHHHHHHHHHHHHHH-----hcCCCcEEeeecceEEEE-e-ecCCh----hhhH
Q 003029 664 LAAENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFT-----ERTPRSHFEQRETSLVWN-Y-KYADV----EFGR 731 (856)
Q Consensus 664 liaenG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~-----~rt~gs~ie~k~~si~~~-y-~~~d~----e~~~ 731 (856)
+|++||++|...++. |...++..++.+....+.+.++.+. ....+.+.+.+...+.+. + +.... .+..
T Consensus 67 ~I~~NGa~i~~~~~~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (246)
T 2amy_A 67 VFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYE 146 (246)
T ss_dssp EESGGGTEEEETTEEEEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHH
T ss_pred EEECCCcEEEeCCcEEEeeecccccCHHHHHHHHHHHHhcCceEEEecCCceeEecccceeehhhhcCcCchhhhhhhee
Confidence 999999999864332 3322100013233333333333221 112344544333222221 1 11111 1111
Q ss_pred H-----HHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecC---Ccc
Q 003029 732 I-----QARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGK 802 (856)
Q Consensus 732 ~-----qa~el~~~L~~~~~~~~~v~v~~-g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~---~~n 802 (856)
. ...++.+.+ .+.+....+.+.. +..++||.|+++|||.|+++| ++ +++++++||||+ +.|
T Consensus 147 ~~~~~~~~~~~~~~l-~~~~~~~~~~~~~s~~~~leI~~~~~~Kg~al~~l---~~------i~~~~viafGD~~~~~~N 216 (246)
T 2amy_A 147 LDKKENIRQKFVADL-RKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHV---EN------DGYKTIYFFGDKTMPGGN 216 (246)
T ss_dssp HHHHHCHHHHHHHHH-HHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGT---TT------SCCSEEEEEECSCC---C
T ss_pred ecCCHHHHHHHHHHH-HHhcCCCcEEEEEcCCcEEEEecCCCchHHHHHHH---hC------CCHHHEEEECCCCCCCCC
Confidence 1 012233334 2222222466654 678999999999999999999 67 678999999995 689
Q ss_pred cccccccccccCcceEEeCC
Q 003029 803 NCNLPLQFLMQTISTVRLDS 822 (856)
Q Consensus 803 De~M~f~~~~~~~~~v~V~~ 822 (856)
|++| |++++ ..++.|+|
T Consensus 217 D~~M-l~~a~--~ag~av~N 233 (246)
T 2amy_A 217 DHEI-FTDPR--TMGYSVTA 233 (246)
T ss_dssp CCHH-HHCTT--EEEEECSS
T ss_pred cHHH-HHhCC--cceEEeeC
Confidence 9999 98763 22677776
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=9.7e-21 Score=201.73 Aligned_cols=208 Identities=18% Similarity=0.231 Sum_probs=127.8
Q ss_pred HHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcc---
Q 003029 583 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE--- 659 (856)
Q Consensus 583 ~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~--- 659 (856)
..+|+..++|||++|+||||+++ +..++++++++|++|++ + +.|+|+|||+...+.+.++.
T Consensus 5 ~~~~~~~~~kli~~DlDGTLl~~--------------~~~is~~~~~al~~l~~-~-i~v~iaTGR~~~~~~~~l~~~~~ 68 (262)
T 2fue_A 5 AQAARRKERVLCLFDVDGTLTPA--------------RQKIDPEVAAFLQKLRS-R-VQIGVVGGSDYCKIAEQLGDGDE 68 (262)
T ss_dssp --------CEEEEEESBTTTBST--------------TSCCCHHHHHHHHHHTT-T-SEEEEECSSCHHHHHHHHSSTTT
T ss_pred cccccccCeEEEEEeCccCCCCC--------------CCcCCHHHHHHHHHHHh-C-CEEEEEcCCCHHHHHHHHhhhhc
Confidence 45677888999999999999987 45689999999999975 6 99999999999999888875
Q ss_pred -c--CceEEeeCceEEEecCCe-eeecccccCChHHHHHHHHHHHHHHh--------cCCCcEEeeecceEEEE-e-ecC
Q 003029 660 -Y--NLWLAAENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTE--------RTPRSHFEQRETSLVWN-Y-KYA 725 (856)
Q Consensus 660 -l--~lgliaenG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~--------rt~gs~ie~k~~si~~~-y-~~~ 725 (856)
+ ..++|++||+++..+++. |...++..++ .+.+.++++...+ ...+.+++.+...+.+. + +..
T Consensus 69 ~~~~~~~~I~~NGa~i~~~~~~i~~~~~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (262)
T 2fue_A 69 VIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLG---EELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSC 145 (262)
T ss_dssp HHHHCSEEEEGGGTEEEETTEECCCCCHHHHHC---HHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTC
T ss_pred ccccCCeEEECCCcEEEeCCeEEEEeeccccCC---HHHHHHHHHHHHHcCceEEEEeCCeEEEechHHhhhHHhhcCCC
Confidence 2 247999999999863321 2111000012 3444444443221 12334443322222221 1 111
Q ss_pred Chh----hhHH-----HHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEE
Q 003029 726 DVE----FGRI-----QARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLC 795 (856)
Q Consensus 726 d~e----~~~~-----qa~el~~~L~~~~~~~~~v~v~~-g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla 795 (856)
+.+ +... ...++.+.+ ...+....+.+.. +..++||.|+++|||.|+++| ++ +++++++|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~s~~~~leI~~~~vsKg~al~~l---~g------i~~~~via 215 (262)
T 2fue_A 146 TLEERIEFSELDKKEKIREKFVEAL-KTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSL---DQ------DSFDTIHF 215 (262)
T ss_dssp CHHHHHHHHHHHHHHCHHHHHHHHH-HHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHH---TT------SCCSEEEE
T ss_pred cccccccEEEEcCCHHHHHHHHHHH-HHhCCCceEEEEECCCcEEEEecCCCCHHHHHHHH---HC------CCHHHEEE
Confidence 111 1101 112233334 2222222466654 567899999999999999999 77 67899999
Q ss_pred EecC---CcccccccccccccCcceEEeCC
Q 003029 796 IGHF---LGKNCNLPLQFLMQTISTVRLDS 822 (856)
Q Consensus 796 ~GD~---~~nDe~M~f~~~~~~~~~v~V~~ 822 (856)
|||. +.||++| |+.++. .++.|+|
T Consensus 216 fGDs~~~~~NDi~M-l~~~~~--~g~av~N 242 (262)
T 2fue_A 216 FGNETSPGGNDFEI-FADPRT--VGHSVVS 242 (262)
T ss_dssp EESCCSTTSTTHHH-HHSTTS--EEEECSS
T ss_pred ECCCCCCCCCCHHH-HhcCcc--CcEEecC
Confidence 9994 5899999 987632 3566665
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-19 Score=193.34 Aligned_cols=214 Identities=15% Similarity=0.169 Sum_probs=147.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhH-HHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEe
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDL-KQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAA 666 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~-~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lglia 666 (856)
++|+|++|+||||+++ ...+++++ +++|++|.+ +|+.|+|+|||+...+.++++.++ .++|+
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~ 66 (271)
T 1rlm_A 2 AVKVIVTDMDGTFLND--------------AKTYNQPRFMAQYQELKK-RGIKFVVASGNQYYQLISFFPELKDEISFVA 66 (271)
T ss_dssp CCCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHHH-HTCEEEEECSSCHHHHGGGCTTTTTTSEEEE
T ss_pred CccEEEEeCCCCCCCC--------------CCcCCHHHHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHhcCCCCEEEE
Confidence 4689999999999987 35688885 999999986 799999999999999999888774 58999
Q ss_pred eCceEEEecCCe-eeecccccCChHHHHHHHHHHHHHHhcC---------CCcEEeeecc------------eEE-----
Q 003029 667 ENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERT---------PRSHFEQRET------------SLV----- 719 (856)
Q Consensus 667 enG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt---------~gs~ie~k~~------------si~----- 719 (856)
+||+.+...++. +.. .++ .+.+.++++.+.+.. .+.+...... .+.
T Consensus 67 ~NGa~i~~~~~~i~~~----~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (271)
T 1rlm_A 67 ENGALVYEHGKQLFHG----ELT---RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDY 139 (271)
T ss_dssp GGGTEEEETTEEEEEC----CCC---HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCG
T ss_pred CCccEEEECCeEEEEe----cCC---HHHHHHHHHHHHhCCCccEEEEeCCCEEeeCCCCHHHHHHHHHhCCCCEEeCch
Confidence 999999864332 222 233 345566665554321 1122211000 000
Q ss_pred ---------EEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCC
Q 003029 720 ---------WNYKYADVEFGRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTA 789 (856)
Q Consensus 720 ---------~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~ 789 (856)
+... .+++ ...++.+.+ ...+. ..+.++ .+..++||.+++++||.+++++++++| ++
T Consensus 140 ~~~~~~~~ki~i~-~~~~----~~~~~~~~l-~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~------i~ 206 (271)
T 1rlm_A 140 QEIDDVLFKFSLN-LPDE----QIPLVIDKL-HVALD-GIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWD------LS 206 (271)
T ss_dssp GGCCSCEEEEEEE-CCGG----GHHHHHHHH-HHHTT-TSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHT------CC
T ss_pred hhCCCceEEEEEE-cCHH----HHHHHHHHH-HHHcC-CcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhC------CC
Confidence 0000 0111 123344444 21111 135554 467899999999999999999999999 67
Q ss_pred cceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHHH--HHHHHHHHHH
Q 003029 790 IDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKMC--MRFLSQNYLM 843 (856)
Q Consensus 790 ~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~~--~~~~l~~~~~ 843 (856)
++++++||| +.||++| ++.+ +.+|.+++.. + |-..+..+ |.+.|+.++.
T Consensus 207 ~~~~~~~GD-~~nD~~m-~~~a---g~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~~~~~ 264 (271)
T 1rlm_A 207 PQNVVAIGD-SGNDAEM-LKMA---RYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLD 264 (271)
T ss_dssp GGGEEEEEC-SGGGHHH-HHHC---SEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred HHHEEEECC-cHHHHHH-HHHc---CCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHHHHHh
Confidence 899999999 9999999 8876 5678888752 2 66767655 9999998875
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.83 E-value=1e-19 Score=195.89 Aligned_cols=220 Identities=13% Similarity=0.227 Sum_probs=146.3
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc-----eEE
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL-----WLA 665 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l-----gli 665 (856)
+|+|++|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+..++..+++ ++|
T Consensus 5 ~kli~~DlDGTLl~~--------------~~~i~~~~~~aL~~l~~-~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I 69 (282)
T 1rkq_A 5 IKLIAIDMDGTLLLP--------------DHTISPAVKNAIAAARA-RGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCI 69 (282)
T ss_dssp CCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEE
T ss_pred ceEEEEeCCCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEE
Confidence 689999999999987 45689999999999986 7999999999999999999888753 699
Q ss_pred eeCceEEEe--cCCe-eeecccccCChHHHHHHHHHHHHHHh----cCC-CcEEeeecc-----------eEEEEe---e
Q 003029 666 AENGMFLRC--TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTE----RTP-RSHFEQRET-----------SLVWNY---K 723 (856)
Q Consensus 666 aenG~~i~~--~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~----rt~-gs~ie~k~~-----------si~~~y---~ 723 (856)
++||+++.. .++. +.. .++.++...+.+.++.+.- .+. +.+.+.+.. .+.... .
T Consensus 70 ~~NGa~i~~~~~~~~i~~~----~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (282)
T 1rkq_A 70 TYNGALVQKAADGSTVAQT----ALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAE 145 (282)
T ss_dssp EGGGTEEEETTTCCEEEEC----CBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGG
T ss_pred EeCCeEEEECCCCeEEEEe----cCCHHHHHHHHHHHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchh
Confidence 999999986 3332 332 3454454545444443210 011 122221100 000000 0
Q ss_pred cC--Chhh-------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceE
Q 003029 724 YA--DVEF-------GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYV 793 (856)
Q Consensus 724 ~~--d~e~-------~~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~v 793 (856)
.. +.+. ......++.+.+ ...+. ..+.++ ++..++||.|++++||.|+++++++++ ++++++
T Consensus 146 ~~~~~~~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~------~~~~~~ 217 (282)
T 1rkq_A 146 KMDPNTQFLKVMMIDEPAILDQAIARI-PQEVK-EKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLG------IKPEEI 217 (282)
T ss_dssp GSCTTCCBCEEEEECCHHHHHHHHHHS-CHHHH-HHEEEEEEETTEEEEEETTCSHHHHHHHHHHHHT------CCGGGE
T ss_pred HhcccCCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEeCCceEEecCCCCCCHHHHHHHHHHhC------CCHHHE
Confidence 00 0000 001122333332 11000 135554 577899999999999999999999999 678999
Q ss_pred EEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHHH--HHHHHHHHH
Q 003029 794 LCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKMC--MRFLSQNYL 842 (856)
Q Consensus 794 la~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~~--~~~~l~~~~ 842 (856)
++||| +.||++| ++.+ +.+|.+++.. + |.+.+..+ |.+.|++++
T Consensus 218 ~~~GD-~~nD~~m-~~~a---g~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~~~~ 270 (282)
T 1rkq_A 218 MAIGD-QENDIAM-IEYA---GVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYV 270 (282)
T ss_dssp EEEEC-SGGGHHH-HHHS---SEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHT
T ss_pred EEECC-cHHHHHH-HHHC---CcEEEecCCcHHHHhhCCEEecCCCcchHHHHHHHHH
Confidence 99999 9999999 8876 4688887742 2 66766554 888888875
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=6.1e-20 Score=196.27 Aligned_cols=216 Identities=12% Similarity=0.181 Sum_probs=124.7
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc-----eE
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL-----WL 664 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l-----gl 664 (856)
++|+|+||+||||+++ ...++++++++|++|.+ +|+.|+++|||+...+.+++..+++ ++
T Consensus 4 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~ 68 (279)
T 3mpo_A 4 TIKLIAIDIDGTLLNE--------------KNELAQATIDAVQAAKA-QGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYA 68 (279)
T ss_dssp -CCEEEECC-------------------------CHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTTCCSSSCEE
T ss_pred ceEEEEEcCcCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEE
Confidence 5799999999999987 45689999999999986 6999999999999999999988753 69
Q ss_pred EeeCceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEE-------------------------
Q 003029 665 AAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLV------------------------- 719 (856)
Q Consensus 665 iaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~------------------------- 719 (856)
|++||+.+....+.+... ...+ .+.+.++++.+.+..-...+...+....
T Consensus 69 i~~nGai~~~~~~~~~~~--~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (279)
T 3mpo_A 69 ITFNGSVAQTISGKVLTN--HSLT---YEDYIDLEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREV 143 (279)
T ss_dssp EEGGGTEEEETTSCEEEE--CCCC---HHHHHHHHHHHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCG
T ss_pred EEcCcEEEECCCCCEEEe--cCCC---HHHHHHHHHHHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCH
Confidence 999999443333332211 1233 3445555555443311111111110000
Q ss_pred -----------EEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCC
Q 003029 720 -----------WNYKYADVEFGRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMK 787 (856)
Q Consensus 720 -----------~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~ 787 (856)
+.+. .++ ....++.+.+ ...+. ..+.++ .+..++||.|+++|||.|++++++++|
T Consensus 144 ~~~~~~~~~~ki~~~-~~~----~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lg------ 210 (279)
T 3mpo_A 144 SETPRDLTISKAMFV-DYP----QVIEQVKANM-PQDFK-DRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLG------ 210 (279)
T ss_dssp GGSCTTCCCCEEEEE-CCH----HHHHHHHHHC-CHHHH-HHEEEECCSSSEEEEEESSCCHHHHHHHHHHHTT------
T ss_pred HHhhccCCcEEEEEc-CCH----HHHHHHHHHH-HHHhC-CCEEEEEecCceEEEecCCCChHHHHHHHHHHcC------
Confidence 0000 011 1122233333 11001 125544 467899999999999999999999999
Q ss_pred CCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHHH--HHHHHHHHHH
Q 003029 788 TAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKMC--MRFLSQNYLM 843 (856)
Q Consensus 788 ~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~~--~~~~l~~~~~ 843 (856)
+++++++|||| +.||++| |+++ +++|.++|.. + |-..+..+ |.+.|++++.
T Consensus 211 i~~~~~i~~GD-~~NDi~m-~~~a---g~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~ 270 (279)
T 3mpo_A 211 LTADDVMTLGD-QGNDLTM-IKYA---GLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIRKYAL 270 (279)
T ss_dssp CCGGGEEEC---CCTTHHH-HHHS---TEECBC---CCHHHHHCSCBC------CHHHHHC----
T ss_pred CCHHHEEEECC-chhhHHH-HHhc---CceeeccCCCHHHHHhcceeccCCCccHHHHHHHHHhc
Confidence 67899999999 9999999 8877 5777777642 2 54544433 7777777653
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.82 E-value=3.1e-19 Score=194.17 Aligned_cols=221 Identities=13% Similarity=0.169 Sum_probs=145.1
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHh--cccC-----
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF--QEYN----- 661 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~--~~l~----- 661 (856)
..+|||++|+||||++.. +..++++++++|++|.+ .|+.|+|+|||++..+..++ ..++
T Consensus 25 M~ikli~~DlDGTLl~~~-------------~~~is~~~~~al~~l~~-~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~ 90 (301)
T 2b30_A 25 ADIKLLLIDFDGTLFVDK-------------DIKVPSENIDAIKEAIE-KGYMVSICTGRSKVGILSAFGEENLKKMNFY 90 (301)
T ss_dssp CCCCEEEEETBTTTBCCT-------------TTCSCHHHHHHHHHHHH-HTCEEEEECSSCHHHHHHHHCHHHHHHHTCC
T ss_pred ccccEEEEECCCCCcCCC-------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHhhHHhhcccccC
Confidence 357999999999999861 24589999999999986 69999999999999999988 7655
Q ss_pred -ceEEeeCceEEEe-cCCe-eeecccccCChHHHHHHHHHHHHHHhcC---------C-CcEEeee-cce--------EE
Q 003029 662 -LWLAAENGMFLRC-TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERT---------P-RSHFEQR-ETS--------LV 719 (856)
Q Consensus 662 -lgliaenG~~i~~-~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt---------~-gs~ie~k-~~s--------i~ 719 (856)
.++|++||+++.. .++. +.. .++. +.+.++++...+.. . +.+.+.. ... ..
T Consensus 91 ~~~~I~~NGa~i~~~~~~~i~~~----~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 163 (301)
T 2b30_A 91 GMPGVYINGTIVYDQIGYTLLDE----TIET---DVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSEN 163 (301)
T ss_dssp SCSEEEGGGTEEECTTCCEEEEC----CCCH---HHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCC
T ss_pred CCeEEEcCCeEEEeCCCCEEEEc----cCCH---HHHHHHHHHHHHcCCceEEEEEeCCEEEEcCchHHHHHHHHhhccC
Confidence 3699999999986 3332 222 2343 33444444332211 1 1111110 000 00
Q ss_pred EEeecCChhhh-------------HHHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhCcCCc
Q 003029 720 WNYKYADVEFG-------------RIQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKK 785 (856)
Q Consensus 720 ~~y~~~d~e~~-------------~~qa~el~~~L~~~~~~~~~v~v~~-g~~~vEV~p~gvnKG~av~~ll~~l~~~~~ 785 (856)
++++..+.++. .....++.+.+ ...+. ..+.++. +..++||.|++++||.|++.+++++|
T Consensus 164 ~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~---- 237 (301)
T 2b30_A 164 RSIIIRHNEMLKYRTMNKLMIVLDPSESKTVIGNL-KQKFK-NKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYN---- 237 (301)
T ss_dssp CCEEECHHHHTTCCCCSEEEECCCTTTHHHHHHHH-HHHST-TTEEEEECTTSCEEEEETTCCHHHHHHHHHHHTT----
T ss_pred CceeecchhhhccCCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEeCCcceEecCCCCCcHHHHHHHHHHcC----
Confidence 00110000000 00122333333 21111 2466655 56889999999999999999999999
Q ss_pred CCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccC-CH--HHHHHHHHHHHH
Q 003029 786 MKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLR-MK--MCMRFLSQNYLM 843 (856)
Q Consensus 786 ~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~-~~--~~~~~~l~~~~~ 843 (856)
++++++++||| +.||++| |+.+ +++|.+++.. + |.+. +. .-|.+.|++++.
T Consensus 238 --~~~~~~~~~GD-~~nD~~m-~~~a---g~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~~~~~ 298 (301)
T 2b30_A 238 --ISNDQVLVVGD-AENDIAM-LSNF---KYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFD 298 (301)
T ss_dssp --CCGGGEEEEEC-SGGGHHH-HHSC---SEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHT
T ss_pred --CCHHHEEEECC-CHHHHHH-HHHc---CCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHHHHHh
Confidence 67899999999 9999999 8876 5688888752 2 6666 54 358999988864
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.3e-19 Score=192.48 Aligned_cols=192 Identities=16% Similarity=0.158 Sum_probs=130.3
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc---eEE
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL---WLA 665 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l---gli 665 (856)
.++|||++|+||||++. ...++++++++|++|.+ +|+.|+|+|||+...+..++..+++ ++|
T Consensus 7 m~~~li~~DlDGTLl~~--------------~~~~~~~~~~~l~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I 71 (275)
T 1xvi_A 7 QQPLLVFSDLDGTLLDS--------------HSYDWQPAAPWLTRLRE-ANVPVILCSSKTSAEMLYLQKTLGLQGLPLI 71 (275)
T ss_dssp CCCEEEEEECTTTTSCS--------------SCCSCCTTHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHTTCTTSCEE
T ss_pred cCceEEEEeCCCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCeEE
Confidence 35799999999999986 23466789999999986 7999999999999999999988753 699
Q ss_pred eeCceEEE-ecCCe-------eeecccccCChHHHHHHHHHHHHHHhcCCCcEEee------------------------
Q 003029 666 AENGMFLR-CTTGK-------WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQ------------------------ 713 (856)
Q Consensus 666 aenG~~i~-~~~~~-------w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~------------------------ 713 (856)
++||+++. ..++. +... ++. +.+.++++.+.......+...
T Consensus 72 ~~NGa~i~~~~~~~~~~~~~~~~~~----l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (275)
T 1xvi_A 72 AENGAVIQLAEQWQEIDGFPRIISG----ISH---GEISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQL 144 (275)
T ss_dssp EGGGTEEECCTTCTTSTTTTEEECS----SCH---HHHHHHHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHC
T ss_pred EeCCCeEEecCcccccCceEEEecC----CCH---HHHHHHHHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHh
Confidence 99999997 32111 3322 332 334444443322111111000
Q ss_pred ecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhC-cCCcCCCCcce
Q 003029 714 RETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIV-HSKKMKTAIDY 792 (856)
Q Consensus 714 k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~-~~~~~~~~~d~ 792 (856)
+.....+.+. .+++ ...++.+.+ .. ..+.++.+..++||.|++++||.|+++++++++ ++ +++
T Consensus 145 ~~~~~~~~~~-~~~~----~~~~~~~~l-~~----~~~~~~~~~~~leI~~~~~~K~~~l~~l~~~~~~~~------~~~ 208 (275)
T 1xvi_A 145 HEASVTLIWR-DSDE----RMAQFTARL-NE----LGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLS------GKR 208 (275)
T ss_dssp CSSCEEEEEC-SCHH----HHHHHHHHH-HH----TTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHHH------SSC
T ss_pred hccCceeEec-CCHH----HHHHHHHHH-Hh----hCeEEEECCceEEEecCCCCHHHHHHHHHHHhhhcc------ccc
Confidence 0011111221 1111 122334444 22 246777777889999999999999999999988 53 567
Q ss_pred --EEEEecCCcccccccccccccCcceEEeCCC
Q 003029 793 --VLCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 793 --vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
+++||| +.||++| |+.+ +.+|.|++.
T Consensus 209 ~~~~~~GD-~~nD~~m-~~~a---g~~va~~n~ 236 (275)
T 1xvi_A 209 PTTLGLGD-GPNDAPL-LEVM---DYAVIVKGL 236 (275)
T ss_dssp CEEEEEES-SGGGHHH-HHTS---SEEEECCCC
T ss_pred CcEEEECC-ChhhHHH-HHhC---CceEEecCC
Confidence 999999 9999999 8876 567888774
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.8e-19 Score=190.10 Aligned_cols=205 Identities=15% Similarity=0.183 Sum_probs=141.4
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC-ceEEeeCc
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN-LWLAAENG 669 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-lgliaenG 669 (856)
+|+|+||+||||+++ ...++++++++|++|.+ +|+.|+++|||+...+.+++..++ .++|++||
T Consensus 5 ~kli~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nG 69 (274)
T 3fzq_A 5 YKLLILDIDGTLRDE--------------VYGIPESAKHAIRLCQK-NHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGG 69 (274)
T ss_dssp CCEEEECSBTTTBBT--------------TTBCCHHHHHHHHHHHH-TTCEEEEECSSCTTTSCHHHHTTCCSEEEETTT
T ss_pred ceEEEEECCCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEeCCChHHHHHHHHHcCCCEEEecCc
Confidence 699999999999987 34689999999999986 799999999999999999888885 36899999
Q ss_pred eEEEecCCe-eeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecc--------------------------------
Q 003029 670 MFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRET-------------------------------- 716 (856)
Q Consensus 670 ~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~-------------------------------- 716 (856)
+++...++. +.. ..+. +.+.++++.+.+..-...+.....
T Consensus 70 a~i~~~~~~~~~~----~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (274)
T 3fzq_A 70 NYIQYHGELLYNQ----SFNQ---RLIKEVVCLLKKREVAFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEK 142 (274)
T ss_dssp TEEEETTEEEEEC----CCCH---HHHHHHHHHHHHHTCEEEEECSSCEEECHHHHHHHHHHHHTTTSCCTTHHHHCCSS
T ss_pred cEEEECCEEEEEc----CCCH---HHHHHHHHHHHHCCceEEEEeCCceEeCCchHHHHHHHHhhhccchhhhhhhhhhh
Confidence 999864332 222 2333 344444444433211111111100
Q ss_pred ----------------eEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEE-EEcC--cEEEEEeCCCCHHHHHHHHH
Q 003029 717 ----------------SLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEV-VQGS--KSVEVRAVGVTKGAAIDRIL 777 (856)
Q Consensus 717 ----------------si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v-~~g~--~~vEV~p~gvnKG~av~~ll 777 (856)
.+.+. .++ .....+.+.+ .. .+.+ ..+. .++||.|++++||.|+++++
T Consensus 143 ~~~~~~~~~~~~~~~~ki~~~---~~~----~~~~~~~~~l-~~-----~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~ 209 (274)
T 3fzq_A 143 ITYENNIEEYKSQDIHKICLW---SNE----KVFDEVKDIL-QD-----KMELAQRDISSQYYEIIQKDFHKGKAIKRLQ 209 (274)
T ss_dssp SCCCCCGGGCSSCCCCEEEEE---CCH----HHHHHHHHHH-GG-----GEEEEEEEGGGTEEEEEETTCSHHHHHHHHH
T ss_pred cccccchhhhcccCeEEEEEE---cCH----HHHHHHHHHh-hc-----ceEEEeccCCCceEEEeeCCCCHHHHHHHHH
Confidence 00000 111 1233445555 22 1343 3445 89999999999999999999
Q ss_pred HHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHH--HHHHHHHHH
Q 003029 778 AEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKM--CMRFLSQNY 841 (856)
Q Consensus 778 ~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~--~~~~~l~~~ 841 (856)
+++| +++++++|||| +.||++| ++++ +++|.+++.. + |-..+.. -|.+.|+++
T Consensus 210 ~~lg------i~~~~~i~~GD-~~NDi~m-~~~a---g~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~~ 271 (274)
T 3fzq_A 210 ERLG------VTQKETICFGD-GQNDIVM-FQAS---DVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKRR 271 (274)
T ss_dssp HHHT------CCSTTEEEECC-SGGGHHH-HHTC---SEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHHT
T ss_pred HHcC------CCHHHEEEECC-ChhHHHH-HHhc---CceEEecCccHHHHHhhhheeCCCchhHHHHHHHHh
Confidence 9999 67899999999 9999999 8877 4888888752 2 5555544 366666654
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.82 E-value=2e-19 Score=192.07 Aligned_cols=217 Identities=13% Similarity=0.120 Sum_probs=141.5
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc---eEEee
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL---WLAAE 667 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l---gliae 667 (856)
+|+|++|+||||+++ ...++++++++|++ . +.|+.|+|+|||+...+.+++..+++ ++|++
T Consensus 2 ikli~~DlDGTLl~~--------------~~~i~~~~~~al~~-~-~~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~ 65 (268)
T 1nf2_A 2 YRVFVFDLDGTLLND--------------NLEISEKDRRNIEK-L-SRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAY 65 (268)
T ss_dssp BCEEEEECCCCCSCT--------------TSCCCHHHHHHHHH-H-TTTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEG
T ss_pred ccEEEEeCCCcCCCC--------------CCccCHHHHHHHHH-H-hCCCEEEEECCCChHHHHHHHHHhCCCCCeEEEe
Confidence 589999999999987 45689999999999 6 47999999999999999999988854 69999
Q ss_pred CceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhc--------CCCcEEeeec---------ceEEEE-eecCChhh
Q 003029 668 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTER--------TPRSHFEQRE---------TSLVWN-YKYADVEF 729 (856)
Q Consensus 668 nG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~r--------t~gs~ie~k~---------~si~~~-y~~~d~e~ 729 (856)
||+.+...++.. +....++.+ .+.++++.+.+. ..+.+.+.+. ..+... +... .++
T Consensus 66 NGa~i~~~~~~~--i~~~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 139 (268)
T 1nf2_A 66 NGAIVYLPEEGV--ILNEKIPPE---VAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNL-SEL 139 (268)
T ss_dssp GGTEEEETTTEE--EEECCBCHH---HHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTH-HHH
T ss_pred CCeEEECCCCCE--EEecCCCHH---HHHHHHHHHHhCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCH-HHh
Confidence 999998622232 111223433 344444444322 1112221110 000000 0000 000
Q ss_pred h-------------HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEE
Q 003029 730 G-------------RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLC 795 (856)
Q Consensus 730 ~-------------~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla 795 (856)
. .....++.+.+ ...+. ..+.++ .+..++||.|++++||.+++.++++++ ++++++++
T Consensus 140 ~~~~~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~------~~~~~~~~ 211 (268)
T 1nf2_A 140 VSKMGTTKLLLIDTPERLDELKEIL-SERFK-DVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMN------WKKEEIVV 211 (268)
T ss_dssp HHHHCBSEEEEECCHHHHHHHHHHH-HHHHT-TTSEEEEEETTEEEEECTTCCHHHHHHHHHHHHT------CCGGGEEE
T ss_pred cccCCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEecCceEEEeCCCCChHHHHHHHHHHcC------CCHHHeEE
Confidence 0 01122333333 11111 235554 567899999999999999999999999 67899999
Q ss_pred EecCCcccccccccccccCcceEEeCCCC------c-cccCCHH--HHHHHHHHHH
Q 003029 796 IGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKM--CMRFLSQNYL 842 (856)
Q Consensus 796 ~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~--~~~~~l~~~~ 842 (856)
||| +.||++| ++.+ +.+|.+++.. + |.+.+.. -|.++|+.++
T Consensus 212 ~GD-~~nD~~~-~~~a---g~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~~~~ 262 (268)
T 1nf2_A 212 FGD-NENDLFM-FEEA---GLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLERIS 262 (268)
T ss_dssp EEC-SHHHHHH-HTTC---SEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBC
T ss_pred EcC-chhhHHH-HHHc---CCEEEecCCCHHHHhhCCEEEccCCcchHHHHHHHHH
Confidence 999 9999999 8866 5688888742 2 6665543 4777776654
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=3.8e-19 Score=188.91 Aligned_cols=214 Identities=12% Similarity=0.080 Sum_probs=139.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC-ceEEeeC
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN-LWLAAEN 668 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-lgliaen 668 (856)
.+|+|+||+||||++.. ...++++++++|++|.+ .|+.|+++|||+...+ +.+..++ .++|++|
T Consensus 11 miKli~~DlDGTLl~~~-------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~-~~~~~l~~~~~i~~n 75 (268)
T 3r4c_A 11 MIKVLLLDVDGTLLSFE-------------THKVSQSSIDALKKVHD-SGIKIVIATGRAASDL-HEIDAVPYDGVIALN 75 (268)
T ss_dssp CCCEEEECSBTTTBCTT-------------TCSCCHHHHHHHHHHHH-TTCEEEEECSSCTTCC-GGGTTSCCCEEEEGG
T ss_pred ceEEEEEeCCCCCcCCC-------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHh-HHHHhcCCCcEEEeC
Confidence 47999999999999842 35689999999999997 6999999999999887 4566664 4789999
Q ss_pred ceEE-EecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHH---------------
Q 003029 669 GMFL-RCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRI--------------- 732 (856)
Q Consensus 669 G~~i-~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~--------------- 732 (856)
|+.+ ...++.. ....++ .+.+.++++.+.+..-...+...+... .....+.+...
T Consensus 76 Ga~i~~~~~~~~---~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (268)
T 3r4c_A 76 GAECVLRDGSVI---RKVAIP---AQDFRKSMELAREFDFAVALELNEGVF---VNRLTPTVEQIAGIVEHPVPPVVDIE 146 (268)
T ss_dssp GTEEEETTSCEE---EECCCC---HHHHHHHHHHHHHTTCEEEEEETTEEE---ESCCCHHHHHHHHHHTCCCCCBCCHH
T ss_pred CcEEEEcCCeEE---EEecCC---HHHHHHHHHHHHHcCcEEEEEECCEEE---EeCCcHHHHHHHHHcCCCCCcccchH
Confidence 9999 7543321 112234 344555555543321111122111110 00001110000
Q ss_pred -H-------------HHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEe
Q 003029 733 -Q-------------ARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (856)
Q Consensus 733 -q-------------a~el~~~L~~~~~~~~~v~v-~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~G 797 (856)
. ..+....+... + ..+.+ ..+..++||.|+++|||.|++++++++| ++++++++||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lg------i~~~~~ia~G 217 (268)
T 3r4c_A 147 EMFERKECCQLCFYFDEEAEQKVMPL-L--SGLSATRWHPLFADVNVAGTSKATGLSLFADYYR------VKVSEIMACG 217 (268)
T ss_dssp HHHHHSCCCCEEEECCHHHHHHHGGG-C--TTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTT------CCGGGEEEEE
T ss_pred HHhccCceEEEEEecChHHHHHHHHh-C--CCcEEEEecCCeEEEeeCCCCHHHHHHHHHHHcC------CCHHHEEEEC
Confidence 0 00111122111 1 23443 4567899999999999999999999999 6789999999
Q ss_pred cCCcccccccccccccCcceEEeCCCC------c-cccCCHHH--HHHHHHHH
Q 003029 798 HFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKMC--MRFLSQNY 841 (856)
Q Consensus 798 D~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~~--~~~~l~~~ 841 (856)
| +.||++| |+.+ +++|.++|.. + |-..+..+ |.+.|++|
T Consensus 218 D-~~NDi~m-~~~a---g~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~ 265 (268)
T 3r4c_A 218 D-GGNDIPM-LKAA---GIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKHF 265 (268)
T ss_dssp C-SGGGHHH-HHHS---SEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHHHT
T ss_pred C-cHHhHHH-HHhC---CCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHHh
Confidence 9 9999999 8876 6889998852 3 55555433 77777665
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.81 E-value=4.4e-19 Score=174.19 Aligned_cols=162 Identities=14% Similarity=0.078 Sum_probs=123.9
Q ss_pred CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 003029 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (856)
Q Consensus 363 ~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~ 442 (856)
+.+|+++||+.+.||+..+++|+..+ +++|+ +.|+++|. ++....+ ++++.+.+. .|.
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~~----~~l~i~G~-----g~~~~~~----~~~~~~~~~--------~v~ 59 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALS-KYKQD----IVLLLKGK-----GPDEKKI----KLLAQKLGV--------KAE 59 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTC-TTGGG----EEEEEECC-----STTHHHH----HHHHHHHTC--------EEE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHh-ccCCC----eEEEEEeC-----CccHHHH----HHHHHHcCC--------eEE
Confidence 46899999999999999999999987 44454 55887763 2333333 344433322 244
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCc-eEEEeC-CCCchhhccCCeEEECCCCHHHHHHH
Q 003029 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKG-VLILSE-FAGAAQSLGAGAILVNPWNITEVANA 520 (856)
Q Consensus 443 ~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g-~lVlSe-~aG~~~~lg~~g~lVnP~d~~~lA~a 520 (856)
+ |.++.+++..+|+.||++++||..||||++++||||| |. |+|+|. .+|..+.+..++.+++|.|+++++++
T Consensus 60 -~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~----G~vPvi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 133 (166)
T 3qhp_A 60 -F-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISV----GIVPVIANSPLSATRQFALDERSLFEPNNAKDLSAK 133 (166)
T ss_dssp -C-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHT----TCCEEEECCTTCGGGGGCSSGGGEECTTCHHHHHHH
T ss_pred -E-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhc----CCCcEEeeCCCCchhhhccCCceEEcCCCHHHHHHH
Confidence 5 9999999999999999999999999999999999999 46 777744 55555665566779999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHH
Q 003029 521 IARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (856)
Q Consensus 521 i~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (856)
|.++++. ++.+.++.++++++++.+++..+++
T Consensus 134 i~~l~~~-~~~~~~~~~~~~~~~~~~s~~~~~~ 165 (166)
T 3qhp_A 134 IDWWLEN-KLERERMQNEYAKSALNYTLENSVI 165 (166)
T ss_dssp HHHHHHC-HHHHHHHHHHHHHHHHHHC------
T ss_pred HHHHHhC-HHHHHHHHHHHHHHHHHCChhhhhc
Confidence 9999995 5577888888888898888877664
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.3e-19 Score=187.17 Aligned_cols=208 Identities=15% Similarity=0.126 Sum_probs=140.5
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc--eEEee
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAE 667 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--gliae 667 (856)
.+|+|++|+||||++. ...++++++++|++|++ .|+.|+|+|||+...+..++..+++ ++|++
T Consensus 4 m~kli~~DlDGTLl~~--------------~~~i~~~~~~~l~~l~~-~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~ 68 (227)
T 1l6r_A 4 MIRLAAIDVDGNLTDR--------------DRLISTKAIESIRSAEK-KGLTVSLLSGNVIPVVYALKIFLGINGPVFGE 68 (227)
T ss_dssp CCCEEEEEHHHHSBCT--------------TSCBCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTCCSCEEEG
T ss_pred ceEEEEEECCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEECCCCcHHHHHHHHHhCCCCeEEEe
Confidence 3689999999999986 35689999999999986 7999999999999999999988754 59999
Q ss_pred CceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcC--CCcEEee-ecceEEEEeecCChhhhHHHHHHHHHHHhcC
Q 003029 668 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERT--PRSHFEQ-RETSLVWNYKYADVEFGRIQARDMLQHLWTG 744 (856)
Q Consensus 668 nG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt--~gs~ie~-k~~si~~~y~~~d~e~~~~qa~el~~~L~~~ 744 (856)
||+++...++.... ....+ +.+.++ +...+.. ...+... +-..+.......++ +..+.+.+.
T Consensus 69 NGa~i~~~~~~~i~-~~~~l-----~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 133 (227)
T 1l6r_A 69 NGGIMFDNDGSIKK-FFSNE-----GTNKFL-EEMSKRTSMRSILTNRWREASTGFDIDPEDV--------DYVRKEAES 133 (227)
T ss_dssp GGTEEECTTSCEEE-SSCSH-----HHHHHH-HHHTTTSSCBCCGGGGGCSSSEEEBCCGGGH--------HHHHHHHHT
T ss_pred CCcEEEeCCCCEEE-EeccH-----HHHHHH-HHHHHHhcCCccccccceecccceEEecCCH--------HHHHHHHHh
Confidence 99999852233210 11111 444444 4332200 0000000 00000000000011 112222133
Q ss_pred CCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC
Q 003029 745 PISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF 824 (856)
Q Consensus 745 ~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~ 824 (856)
+ .+.++++..++||.|++++||.++++++++++ ++++++++||| +.||++| |+.+ +.+|.+++..
T Consensus 134 -~---~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~------~~~~~~~~iGD-~~nD~~m-~~~a---g~~va~~n~~ 198 (227)
T 1l6r_A 134 -R---GFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYS------LEYDEILVIGD-SNNDMPM-FQLP---VRKACPANAT 198 (227)
T ss_dssp -T---TEEEEEETTEEEEEETTCSHHHHHHHHHHHTT------CCGGGEEEECC-SGGGHHH-HTSS---SEEEECTTSC
T ss_pred -c---CEEEEecCcEEEEecCCCCHHHHHHHHHHHhC------cCHHHEEEECC-cHHhHHH-HHHc---CceEEecCch
Confidence 2 46666788999999999999999999999998 66889999999 9999999 8876 5678887652
Q ss_pred -------ccccCCH--HHHHHHHHHHH
Q 003029 825 -------LHYLRMK--MCMRFLSQNYL 842 (856)
Q Consensus 825 -------~~~l~~~--~~~~~~l~~~~ 842 (856)
.|-+.+. .-|.++|+.++
T Consensus 199 ~~~k~~a~~v~~~~~~~Gv~~~l~~~~ 225 (227)
T 1l6r_A 199 DNIKAVSDFVSDYSYGEEIGQIFKHFE 225 (227)
T ss_dssp HHHHHHCSEECSCCTTHHHHHHHHHTT
T ss_pred HHHHHhCCEEecCCCCcHHHHHHHHHh
Confidence 2666554 45888887765
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.81 E-value=7.7e-19 Score=185.81 Aligned_cols=211 Identities=11% Similarity=0.147 Sum_probs=139.4
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc-eEEeeC
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL-WLAAEN 668 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l-gliaen 668 (856)
++|+|+||+||||++. ...++++++++|++|.+ .|+.|+++|||+...+.+++..+++ ++|+.|
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~n 66 (258)
T 2pq0_A 2 GRKIVFFDIDGTLLDE--------------QKQLPLSTIEAVRRLKQ-SGVYVAIATGRAPFMFEHVRKQLGIDSFVSFN 66 (258)
T ss_dssp CCCEEEECTBTTTBCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCGGGSHHHHHHHTCCCEEEGG
T ss_pred CceEEEEeCCCCCcCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHhcCCCEEEECC
Confidence 3689999999999987 34689999999999986 7999999999999999888887743 589999
Q ss_pred ceEEEecCCe-eeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEE-----------------eecCChhh-
Q 003029 669 GMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWN-----------------YKYADVEF- 729 (856)
Q Consensus 669 G~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~-----------------y~~~d~e~- 729 (856)
|+++...++. +.. ..+ .+.+.++++.+.+..-...+..... +... +......+
T Consensus 67 Ga~i~~~~~~i~~~----~~~---~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (258)
T 2pq0_A 67 GQYVVFEGNVLYKQ----PLR---REKVRALTEEAHKNGHPLVFMDAEK-MRASIGDHPHIHVSMASLKFAHPPVDPLYY 138 (258)
T ss_dssp GTEEEETTEEEEEC----CCC---HHHHHHHHHHHHHTTCCEEEECSSC-EEESSSSCHHHHHHHHHTTCCCCCBCTTGG
T ss_pred CCEEEECCEEEEEe----cCC---HHHHHHHHHHHHhCCCeEEEEeCCc-EEEecCCcHHHHHHHHhhcCCccccccchh
Confidence 9999864332 222 223 3555666665543211111110000 0000 00000000
Q ss_pred -----------h-HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEE
Q 003029 730 -----------G-RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCI 796 (856)
Q Consensus 730 -----------~-~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~ 796 (856)
+ ......+.+.+ ..+.+. ++..++||.|+++|||.|++++++++| +++++++||
T Consensus 139 ~~~~~~k~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lg------i~~~~~ia~ 205 (258)
T 2pq0_A 139 ENKDIYQALLFCRAEEEEPYVRNY-------PEFRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLG------IDKKDVYAF 205 (258)
T ss_dssp GGSCCCEEEECSCHHHHHHHHHHC-------TTEEEEEEETTEEEEEESSCCHHHHHHHHHHHHT------CCGGGEEEE
T ss_pred hccCceEEEEECCHHHHHHHHHhC-------CCeEEEEeCCceEEEEECCCChHHHHHHHHHHhC------CCHHHEEEE
Confidence 0 00111111111 134443 467899999999999999999999999 678999999
Q ss_pred ecCCcccccccccccccCcceEEeCCCC------c-cccCCHH--HHHHHHHHH
Q 003029 797 GHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKM--CMRFLSQNY 841 (856)
Q Consensus 797 GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~--~~~~~l~~~ 841 (856)
|| +.||++| |+.+ +.+|.++|.. + |-..+.. -|.+.|+++
T Consensus 206 GD-s~NDi~m-l~~a---g~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~~~ 254 (258)
T 2pq0_A 206 GD-GLNDIEM-LSFV---GTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLKQL 254 (258)
T ss_dssp CC-SGGGHHH-HHHS---SEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHHHT
T ss_pred CC-cHHhHHH-HHhC---CcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHHHh
Confidence 99 9999999 8866 5688888742 2 5444443 377777665
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.3e-18 Score=185.70 Aligned_cols=214 Identities=11% Similarity=0.156 Sum_probs=142.5
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc--eEEeeC
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAEN 668 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--gliaen 668 (856)
.|+|+||+||||++. ...++++++++|++|.+ .|+.|+++|||+...+.+++..+++ .+|++|
T Consensus 4 ikli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 68 (288)
T 1nrw_A 4 MKLIAIDLDGTLLNS--------------KHQVSLENENALRQAQR-DGIEVVVSTGRAHFDVMSIFEPLGIKTWVISAN 68 (288)
T ss_dssp CCEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGG
T ss_pred eEEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcC
Confidence 689999999999987 45689999999999986 7999999999999999999988753 699999
Q ss_pred ceEEEe-cCCe-eeecccccCChHHHHHHHHHHHHHHhcC--------CCcEEeeec------c---e------------
Q 003029 669 GMFLRC-TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERT--------PRSHFEQRE------T---S------------ 717 (856)
Q Consensus 669 G~~i~~-~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt--------~gs~ie~k~------~---s------------ 717 (856)
|+.+.. .++. +.. ..+ .+.+.++++...+.. .+.+.+... . .
T Consensus 69 Ga~i~~~~~~~~~~~----~~~---~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (288)
T 1nrw_A 69 GAVIHDPEGRLYHHE----TID---KKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVL 141 (288)
T ss_dssp GTEEECTTCCEEEEC----CCC---HHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHH
T ss_pred CeEEEcCCCcEEEEe----eCC---HHHHHHHHHHHHHCCcEEEEEeCCEEEEcCchHHHHHHHHHHHhhcccccchHHH
Confidence 999986 3222 222 223 345555555443221 111111000 0 0
Q ss_pred ----------EEEEeecCChhh-----------------hHHHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCH
Q 003029 718 ----------LVWNYKYADVEF-----------------GRIQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTK 769 (856)
Q Consensus 718 ----------i~~~y~~~d~e~-----------------~~~qa~el~~~L~~~~~~~~~v~v~~-g~~~vEV~p~gvnK 769 (856)
..+.+...-.++ ......++.+.+ .. . ..+.++. +..++||.|++++|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~~l-~~-~--~~~~~~~s~~~~lei~~~~~~K 217 (288)
T 1nrw_A 142 KQAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRY-EH-A--EDLTLVSSAEHNFELSSRKASK 217 (288)
T ss_dssp HHHHHHHHHTCCEEECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHH-TT-C--TTEEEECSSTTEEEEEETTCSH
T ss_pred HhhhhhhhhcCCceEcCCHHHhhccccCCCceEEEEEcCCHHHHHHHHHHH-hh-C--CCEEEEeeCCCcEEEecCCCCh
Confidence 001110000000 012233445555 33 1 2466654 56899999999999
Q ss_pred HHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHHH--HHHHHHH
Q 003029 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKMC--MRFLSQN 840 (856)
Q Consensus 770 G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~~--~~~~l~~ 840 (856)
|.|++.+++++| ++++++++||| +.||++| ++.+ +++|.|++.. + |-+.+..+ |.+.|++
T Consensus 218 ~~~~~~~~~~~~------~~~~~~~~~GD-~~nD~~m-~~~a---g~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~~ 286 (288)
T 1nrw_A 218 GQALKRLAKQLN------IPLEETAAVGD-SLNDKSM-LEAA---GKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKH 286 (288)
T ss_dssp HHHHHHHHHHTT------CCGGGEEEEES-SGGGHHH-HHHS---SEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred HHHHHHHHHHhC------CCHHHEEEEcC-CHHHHHH-HHHc---CcEEEEcCCCHHHHhhCceeecCCCcChHHHHHHH
Confidence 999999999999 67899999999 9999999 8876 5688887642 2 55555443 6666665
Q ss_pred H
Q 003029 841 Y 841 (856)
Q Consensus 841 ~ 841 (856)
+
T Consensus 287 ~ 287 (288)
T 1nrw_A 287 L 287 (288)
T ss_dssp T
T ss_pred h
Confidence 4
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-19 Score=190.74 Aligned_cols=190 Identities=15% Similarity=0.195 Sum_probs=128.0
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC----ceEEee
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----LWLAAE 667 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~----lgliae 667 (856)
+||++|+||||+++ +..+ ++++++|+++. .|+.|+|+|||++..+.++++.++ .++|++
T Consensus 4 ~li~~DlDGTLl~~--------------~~~~-~~~~~~l~~~~--~gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~ 66 (244)
T 1s2o_A 4 LLLISDLDNTWVGD--------------QQAL-EHLQEYLGDRR--GNFYLAYATGRSYHSARELQKQVGLMEPDYWLTA 66 (244)
T ss_dssp EEEEECTBTTTBSC--------------HHHH-HHHHHHHHTTG--GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEET
T ss_pred eEEEEeCCCCCcCC--------------HHHH-HHHHHHHHHhc--CCCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEEC
Confidence 59999999999986 2223 68899999965 379999999999999999988853 479999
Q ss_pred CceEEEecC---CeeeecccccCChHH-HHHHHHHHHHHHhcCCCcEE----eeecceEEEEeecCChhhhHHHHHHHHH
Q 003029 668 NGMFLRCTT---GKWMTTMPEHLNMEW-VDSLKHVFEYFTERTPRSHF----EQRETSLVWNYKYADVEFGRIQARDMLQ 739 (856)
Q Consensus 668 nG~~i~~~~---~~w~~~~~~~~~~~w-~~~v~~i~~~~~~rt~gs~i----e~k~~si~~~y~~~d~e~~~~qa~el~~ 739 (856)
||+++.... ..|...+ +..| .+.+..++..+ ++... +.+...+.+++..... .....++.+
T Consensus 67 NGa~i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ki~~~~~~~~~---~~~~~~l~~ 135 (244)
T 1s2o_A 67 VGSEIYHPEGLDQHWADYL----SEHWQRDILQAIADGF----EALKPQSPLEQNPWKISYHLDPQAC---PTVIDQLTE 135 (244)
T ss_dssp TTTEEEETTEECHHHHHHH----HTTCCHHHHHHHHHTC----TTEEECCGGGCBTTBEEEEECTTSC---THHHHHHHH
T ss_pred CCcEEEeCCCcChHHHHHH----hccccHHHHHHHHHhc----cCccccCcccCCCeEEEEEeChhhH---HHHHHHHHH
Confidence 999998531 1122111 1112 22233333222 22111 1233445555432211 112234444
Q ss_pred HHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceE
Q 003029 740 HLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTV 818 (856)
Q Consensus 740 ~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v 818 (856)
.+ ... ...+.++ ++..++||.|++++||.|+++++++++ ++++++++||| +.||++| |+.+ +.+|
T Consensus 136 ~~-~~~--~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~------~~~~~~~~~GD-~~nD~~m-~~~~---g~~v 201 (244)
T 1s2o_A 136 ML-KET--GIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLA------MEPSQTLVCGD-SGNDIGL-FETS---ARGV 201 (244)
T ss_dssp HH-HTS--SCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTT------CCGGGEEEEEC-SGGGHHH-HTSS---SEEE
T ss_pred HH-Hhc--CCCeEEEEecCceEEeccCCCChHHHHHHHHHHhC------CCHHHEEEECC-chhhHHH-Hhcc---CcEE
Confidence 45 332 2256664 467899999999999999999999998 67899999999 9999999 8854 5688
Q ss_pred EeCCC
Q 003029 819 RLDSS 823 (856)
Q Consensus 819 ~V~~~ 823 (856)
.+++.
T Consensus 202 a~~na 206 (244)
T 1s2o_A 202 IVRNA 206 (244)
T ss_dssp ECTTC
T ss_pred EEcCC
Confidence 88764
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=7.2e-19 Score=199.74 Aligned_cols=161 Identities=9% Similarity=0.036 Sum_probs=125.6
Q ss_pred EEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecc-cccCChHHHHHHHHHHHHhCcCccCceEEEEEE
Q 003029 327 RVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL-DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 405 (856)
Q Consensus 327 ~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rl-d~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~ 405 (856)
++.++|+|+|.+.|.+... ...+++.|+++||+ .+.||++.+|+||+.+.+++|+. .++.|+++|
T Consensus 218 ~~~~i~~g~d~~~~~~~~~-------------~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~-~~~~l~ivG 283 (413)
T 2x0d_A 218 DEYFFQPKINTTLKNYIND-------------KRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRS-NEWKIISVG 283 (413)
T ss_dssp EEEEECCCCCHHHHTTTTS-------------CCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTG-GGCEEEEEE
T ss_pred ceEEeCCCcCchhhccccc-------------ccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCC-CceEEEEEc
Confidence 5788999999887753210 12356789999996 68999999999999998888862 125588787
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCC
Q 003029 406 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDL 485 (856)
Q Consensus 406 ~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~ 485 (856)
.+.. . .+ .+.. ..|+ |.|.++.+++.++|+.||+||+||.+||||++++|||||+
T Consensus 284 ~~~~-~---------------~~----l~~~--~~v~-f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G-- 338 (413)
T 2x0d_A 284 EKHK-D---------------IA----LGKG--IHLN-SLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFG-- 338 (413)
T ss_dssp SCCC-C---------------EE----EETT--EEEE-EEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTT--
T ss_pred CCch-h---------------hh----cCCc--CcEE-EcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCC--
Confidence 4321 0 01 1111 1355 5899999999999999999999999999999999999994
Q ss_pred CCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCH
Q 003029 486 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSP 529 (856)
Q Consensus 486 ~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~ 529 (856)
.|||++ .+|..+.+ |.+|++|+|.|++++|++|.++++++.
T Consensus 339 --~PVV~~-~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 339 --LRVITN-KYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFN 381 (413)
T ss_dssp --CEEEEE-CBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC
T ss_pred --CcEEEe-CCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHH
Confidence 788875 45777766 568999999999999999999998654
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.80 E-value=4.3e-19 Score=187.51 Aligned_cols=185 Identities=16% Similarity=0.116 Sum_probs=123.3
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEeeC
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliaen 668 (856)
+|+|++|+||||+ . ...++ +++++|++|.+ +|+.|+|+|||+...+..++..++ .++|++|
T Consensus 2 ikli~~DlDGTLl-~--------------~~~~~-~~~~~l~~l~~-~g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~N 64 (249)
T 2zos_A 2 IRLIFLDIDKTLI-P--------------GYEPD-PAKPIIEELKD-MGFEIIFNSSKTRAEQEYYRKELEVETPFISEN 64 (249)
T ss_dssp EEEEEECCSTTTC-T--------------TSCSG-GGHHHHHHHHH-TTEEEEEBCSSCHHHHHHHHHHHTCCSCEEETT
T ss_pred ccEEEEeCCCCcc-C--------------CCCcH-HHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCccEEEeC
Confidence 4899999999999 5 22344 49999999986 799999999999999999998875 4899999
Q ss_pred ceEEEecC-------------CeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEe-----------------------
Q 003029 669 GMFLRCTT-------------GKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFE----------------------- 712 (856)
Q Consensus 669 G~~i~~~~-------------~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie----------------------- 712 (856)
|++|...+ +.+... ..++. +.+.++++.+.+.. +....
T Consensus 65 Ga~i~~~~~~~~~~~~~~~~~~~~i~~--~~l~~---~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (249)
T 2zos_A 65 GSAIFIPKGYFPFDVKGKEVGNYIVIE--LGIRV---EKIREELKKLENIY-GLKYYGNSTKEEIEKFTGMPPELVPLAM 138 (249)
T ss_dssp TTEEECCTTCCC------CCCCCCEEE--CSCCH---HHHHHHHHHHHHHH-TCEEGGGSCHHHHHHHHCCCTTTHHHHH
T ss_pred CeEEEccCCcccccccccccCceEEEe--cCCCH---HHHHHHHHHHHhhc-CEEEecCCCHHHHHHHhCCChhHhhhhh
Confidence 99998532 222111 12332 33344443332210 00000
Q ss_pred eecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCC-Ccc
Q 003029 713 QRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKT-AID 791 (856)
Q Consensus 713 ~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~-~~d 791 (856)
.+.....+.+.. +++. .+.+ .. ..+.++.+..++||.| ++|||.|+++|+++++ + +++
T Consensus 139 ~~~~~~~~~~~~-~~~~--------~~~l-~~----~~~~~~~s~~~~ei~~-g~sKg~al~~l~~~~~------~~~~~ 197 (249)
T 2zos_A 139 EREYSETIFEWS-RDGW--------EEVL-VE----GGFKVTMGSRFYTVHG-NSDKGKAAKILLDFYK------RLGQI 197 (249)
T ss_dssp CCSSCEEEEECS-SSCH--------HHHH-HH----TTCEEEECSSSEEEEC-SCCHHHHHHHHHHHHH------TTSCE
T ss_pred hhhhcCceEecC-CHHH--------HHHH-Hh----CCEEEEecCCeEEEeC-CCChHHHHHHHHHHhc------cCCCc
Confidence 000000011111 1111 1222 11 1456666667899999 9999999999999988 5 579
Q ss_pred eEEEEecCCcccccccccccccCcceEEeCCCC
Q 003029 792 YVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF 824 (856)
Q Consensus 792 ~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~ 824 (856)
+++|||| +.||++| |+.+ +.+|.+++..
T Consensus 198 ~viafGD-~~NDi~M-l~~a---g~~va~gna~ 225 (249)
T 2zos_A 198 ESYAVGD-SYNDFPM-FEVV---DKVFIVGSLK 225 (249)
T ss_dssp EEEEEEC-SGGGHHH-HTTS---SEEEEESSCC
T ss_pred eEEEECC-CcccHHH-HHhC---CcEEEeCCCC
Confidence 9999999 9999999 9876 5688888753
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.79 E-value=4.2e-18 Score=177.70 Aligned_cols=209 Identities=13% Similarity=0.140 Sum_probs=146.5
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEeeC
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliaen 668 (856)
+|+|+||+||||++. ...++++++++|++|.+ .|+.|+++|||+...+.+++..++ ..+|++|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~n 67 (231)
T 1wr8_A 3 IKAISIDIDGTITYP--------------NRMIHEKALEAIRRAES-LGIPIMLVTGNTVQFAEAASILIGTSGPVVAED 67 (231)
T ss_dssp CCEEEEESTTTTBCT--------------TSCBCHHHHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGG
T ss_pred eeEEEEECCCCCCCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeC
Confidence 689999999999987 35689999999999986 799999999999999998888774 3599999
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEee-ec---ceEEEEeecCChhhhHHHHHHHHHHHhcC
Q 003029 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQ-RE---TSLVWNYKYADVEFGRIQARDMLQHLWTG 744 (856)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~-k~---~si~~~y~~~d~e~~~~qa~el~~~L~~~ 744 (856)
|+.+...+ ... ....+ +.+.++++.+.+..||..++. +. ..+.+.....+++ ...++.+.+ .
T Consensus 68 Ga~i~~~~-~~~--~~~~l-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~- 133 (231)
T 1wr8_A 68 GGAISYKK-KRI--FLASM-----DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVE----TVREIINEL-N- 133 (231)
T ss_dssp GTEEEETT-EEE--ESCCC-----SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHH----HHHHHHHHT-T-
T ss_pred CcEEEeCC-EEE--EeccH-----HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHH----HHHHHHHhc-C-
Confidence 99987632 221 11112 344555555442334433210 00 0111111011221 223344433 1
Q ss_pred CCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-
Q 003029 745 PISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS- 823 (856)
Q Consensus 745 ~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~- 823 (856)
..+.++.+..++||.|++.+|+.+++++++++| ++++++++||| +.||++| ++.+ +++|.|++.
T Consensus 134 ----~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~------~~~~~~~~iGD-~~nD~~~-~~~a---g~~v~~~~~~ 198 (231)
T 1wr8_A 134 ----LNLVAVDSGFAIHVKKPWINKGSGIEKASEFLG------IKPKEVAHVGD-GENDLDA-FKVV---GYKVAVAQAP 198 (231)
T ss_dssp ----CSCEEEECSSCEEEECTTCCHHHHHHHHHHHHT------SCGGGEEEEEC-SGGGHHH-HHHS---SEEEECTTSC
T ss_pred ----CcEEEEecCcEEEEecCCCChHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHH-HHHc---CCeEEecCCC
Confidence 245656777899999999999999999999999 56899999999 9999999 8766 566778764
Q ss_pred -----Cc-cccCCHHH--HHHHHHHHHH
Q 003029 824 -----FL-HYLRMKMC--MRFLSQNYLM 843 (856)
Q Consensus 824 -----~~-~~l~~~~~--~~~~l~~~~~ 843 (856)
.+ |-+.+..+ |.++|+.++.
T Consensus 199 ~~~~~~a~~v~~~~~e~Gv~~~l~~~~~ 226 (231)
T 1wr8_A 199 KILKENADYVTKKEYGEGGAEAIYHILE 226 (231)
T ss_dssp HHHHTTCSEECSSCHHHHHHHHHHHHHH
T ss_pred HHHHhhCCEEecCCCcchHHHHHHHHHH
Confidence 22 77777665 9999988873
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-18 Score=184.83 Aligned_cols=213 Identities=15% Similarity=0.189 Sum_probs=139.8
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccC-CChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC----c-eEE
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELK-LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----L-WLA 665 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~-~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~----l-gli 665 (856)
|+|+||+||||++. +.. ++++++++|++|++ .|+.|+++|||+ ..+.+++..++ + ++|
T Consensus 3 kli~~DlDGTLl~~--------------~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i 66 (261)
T 2rbk_A 3 KALFFDIDGTLVSF--------------ETHRIPSSTIEALEAAHA-KGLKIFIATGRP-KAIINNLSELQDRNLIDGYI 66 (261)
T ss_dssp CEEEECSBTTTBCT--------------TTSSCCHHHHHHHHHHHH-TTCEEEEECSSC-GGGCCSCHHHHHTTCCCEEE
T ss_pred cEEEEeCCCCCcCC--------------CCCcCCHHHHHHHHHHHH-CCCEEEEECCCh-HHHHHHHHHhCcccccCeEE
Confidence 89999999999987 344 89999999999986 799999999999 88877766554 3 689
Q ss_pred eeCceEEEecCCe-eeecccccCChHHHHHHHHHHHHHHhc-CC-------CcEEeeecceEE-EEeecC--------Ch
Q 003029 666 AENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTER-TP-------RSHFEQRETSLV-WNYKYA--------DV 727 (856)
Q Consensus 666 aenG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~r-t~-------gs~ie~k~~si~-~~y~~~--------d~ 727 (856)
++||+++...++. +.. .++. +.+.++++...+. .+ +.+.+.....+. .++... .+
T Consensus 67 ~~nGa~i~~~~~~i~~~----~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (261)
T 2rbk_A 67 TMNGAYCFVGEEVIYKS----AIPQ---EEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSF 139 (261)
T ss_dssp EGGGTEEEETTEEEEEC----CCCH---HHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCH
T ss_pred EeCCEEEEECCEEEEec----CCCH---HHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCcccc
Confidence 9999999863322 222 2343 3344444433322 11 112211000000 000000 00
Q ss_pred hhhH---------HHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEe
Q 003029 728 EFGR---------IQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (856)
Q Consensus 728 e~~~---------~qa~el~~~L~~~~~~~~~v~v~~-g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~G 797 (856)
++.. ....+....+ ...+. .+.++. +..++||.|++++||.+++++++++| ++++++++||
T Consensus 140 ~~~~~~~~~k~~~~~~~~~~~~~-~~~~~--~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~------~~~~~~~~iG 210 (261)
T 2rbk_A 140 EEASNKEVIQMTPFITEEEEKEV-LPSIP--TCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFG------IKLEETMSFG 210 (261)
T ss_dssp HHHHTSCCSEEEECCCHHHHHHH-GGGST--TCEEECSSTTCCEEESTTCSHHHHHHHHHHHHT------CCGGGEEEEE
T ss_pred chhccCceeEEEEEeCHHHHHHH-HHhcC--CeEEEEecCCeEEecCCCCChHHHHHHHHHHcC------CCHHHEEEEC
Confidence 0000 0000111123 22222 355554 56799999999999999999999999 6789999999
Q ss_pred cCCcccccccccccccCcceEEeCCCC-------ccccCCHHH--HHHHHHHH
Q 003029 798 HFLGKNCNLPLQFLMQTISTVRLDSSF-------LHYLRMKMC--MRFLSQNY 841 (856)
Q Consensus 798 D~~~nDe~M~f~~~~~~~~~v~V~~~~-------~~~l~~~~~--~~~~l~~~ 841 (856)
| +.||++| ++.+ +.+|.+++.. .|.+.+..+ |.++|+++
T Consensus 211 D-~~nD~~~-~~~a---g~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~~~ 258 (261)
T 2rbk_A 211 D-GGNDISM-LRHA---AIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHF 258 (261)
T ss_dssp C-SGGGHHH-HHHS---SEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred C-CHHHHHH-HHHc---CceEEecCccHHHHhhCCEEeccCchhhHHHHHHHh
Confidence 9 9999999 8876 5678887642 288889999 99998876
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=8.5e-18 Score=187.17 Aligned_cols=279 Identities=13% Similarity=0.127 Sum_probs=176.1
Q ss_pred HhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHh-h-cCCEEEEeCHHHHHHHHH
Q 003029 227 KHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV-L-AADLVGFHTYDYARHFVS 304 (856)
Q Consensus 227 ~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~l-l-~aDlIgf~t~~~~~~Fl~ 304 (856)
+..+ .|+|++|+.....++..+..+..++|+.+..|... +...+. ++...+.+.+ . .+|.+...+....+.|..
T Consensus 83 ~~~~-pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~~l~~ 158 (384)
T 1vgv_A 83 AEFK-PDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR-TGDLYS--PWPEEANRTLTGHLAMYHFSPTETSRQNLLR 158 (384)
T ss_dssp HHHC-CSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC-CSCTTS--STTHHHHHHHHHTTCSEEEESSHHHHHHHHH
T ss_pred HHhC-CCEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc-cccccC--CCchHhhHHHHHhhccEEEcCcHHHHHHHHH
Confidence 3334 59999997533333333333345788877666432 111111 1122233332 2 389998888766665532
Q ss_pred HHHHHhCcccCCCceeeCCeeEEEEEeeccc-ChhhhhhhhcCCchHHHHHHHHHHhc----CC-ceEEEeeccccc-CC
Q 003029 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETFA----GR-KVMLGVDRLDMI-KG 377 (856)
Q Consensus 305 ~~~~~lg~~~~~~~v~~~g~~~~v~viP~GI-D~~~f~~~~~~~~~~~~~~~lr~~~~----~~-~iIl~V~Rld~~-KG 377 (856)
.|.. ..++.++|+|+ |...+.+.. .+........++++++ ++ .+++++||+.+. ||
T Consensus 159 -----~g~~-----------~~~i~vi~n~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~kg 221 (384)
T 1vgv_A 159 -----ENVA-----------DSRIFITGNTVIDALLWVRDQ-VMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRG 221 (384)
T ss_dssp -----TTCC-----------GGGEEECCCHHHHHHHHHHHH-TTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCHH
T ss_pred -----cCCC-----------hhhEEEeCChHHHHHHhhhhc-cccchhhhHHHHHhccccCCCCCEEEEEeCCccccchH
Confidence 2321 23577899995 543332210 0000011124455432 33 477899999987 99
Q ss_pred hHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHH
Q 003029 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 457 (856)
Q Consensus 378 i~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly 457 (856)
+..+++|+..+.+++|++ .|++++++ ++ .++++++++++. ...|.+ .+.++.+++..+|
T Consensus 222 ~~~li~a~~~l~~~~~~~----~l~i~~g~----~~---~~~~~l~~~~~~---------~~~v~~-~g~~~~~~~~~~~ 280 (384)
T 1vgv_A 222 FEEICHALADIATTHQDI----QIVYPVHL----NP---NVREPVNRILGH---------VKNVIL-IDPQEYLPFVWLM 280 (384)
T ss_dssp HHHHHHHHHHHHHHCTTE----EEEEECCB----CH---HHHHHHHHHHTT---------CTTEEE-ECCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCe----EEEEEcCC----CH---HHHHHHHHHhhc---------CCCEEE-eCCCCHHHHHHHH
Confidence 999999999999888875 35544322 22 234455554321 013664 6788889999999
Q ss_pred HHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCC-CCchhhc--cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHH
Q 003029 458 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-AGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREK 534 (856)
Q Consensus 458 ~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~-aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~ 534 (856)
+.||+||+|| |.+++|||||+ .|+|+|.. +|..+.+ | +|++|+| |++++|++|.++|+++ +.+.+
T Consensus 281 ~~ad~~v~~S-----g~~~lEA~a~G----~PvI~~~~~~~~~e~v~~g-~g~lv~~-d~~~la~~i~~ll~d~-~~~~~ 348 (384)
T 1vgv_A 281 NHAWLILTDS-----GGIQEEAPSLG----KPVLVMRDTTERPEAVTAG-TVRLVGT-DKQRIVEEVTRLLKDE-NEYQA 348 (384)
T ss_dssp HHCSEEEESS-----STGGGTGGGGT----CCEEEESSCCSCHHHHHHT-SEEEECS-SHHHHHHHHHHHHHCH-HHHHH
T ss_pred HhCcEEEECC-----cchHHHHHHcC----CCEEEccCCCCcchhhhCC-ceEEeCC-CHHHHHHHHHHHHhCh-HHHhh
Confidence 9999999999 44589999994 89999987 7777666 5 8999988 9999999999999854 46666
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHH
Q 003029 535 RHWHNFTHVTTHTAQEWAETFVSEL 559 (856)
Q Consensus 535 r~~~~~~~v~~~~~~~W~~~fl~~l 559 (856)
+.++.+++...+++...++.+++.+
T Consensus 349 ~~~~~~~~~~~~~~~~i~~~~~~~~ 373 (384)
T 1vgv_A 349 MSRAHNPYGDGQACSRILEALKNNR 373 (384)
T ss_dssp HHSSCCTTCCSCHHHHHHHHHHHTC
T ss_pred hhhccCCCcCCCHHHHHHHHHHHHH
Confidence 6666666555566666555554433
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.76 E-value=7.1e-18 Score=186.98 Aligned_cols=269 Identities=14% Similarity=0.125 Sum_probs=174.2
Q ss_pred CCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhh--cCCEEEEeCHHHHHHHHHHHHHH
Q 003029 232 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVSACTRI 309 (856)
Q Consensus 232 ~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll--~aDlIgf~t~~~~~~Fl~~~~~~ 309 (856)
.|+|++|......++..+..+..++|+.++.|.. .+...+. ++...+.+.++ .+|.+...+....+.+..
T Consensus 96 pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~----- 167 (375)
T 3beo_A 96 PDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL-RTWDKYS--PYPEEMNRQLTGVMADLHFSPTAKSATNLQK----- 167 (375)
T ss_dssp CSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC-CCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHHHH-----
T ss_pred CCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc-ccccccC--CChhHhhhhHHhhhhheeeCCCHHHHHHHHH-----
Confidence 5999998753333332222223467787655542 2211111 22234444433 389998888766655532
Q ss_pred hCcccCCCceeeCCeeEEEEEeecc-cChhhhhhhhcCCchHHHHHHHHHHhcC-CceEEEeeccccc-CChHHHHHHHH
Q 003029 310 LGFEGTPEGVEDQGRLTRVAAFPIG-IDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMI-KGIPQKLLAFE 386 (856)
Q Consensus 310 lg~~~~~~~v~~~g~~~~v~viP~G-ID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~iIl~V~Rld~~-KGi~~~L~Af~ 386 (856)
.|. ...++.++|+| +|...+.+..... ..+++++.+ +.+++++||+.+. ||+..+++|+.
T Consensus 168 ~g~-----------~~~~i~vi~n~~~d~~~~~~~~~~~------~~~~~~~~~~~~vl~~~gr~~~~~K~~~~li~a~~ 230 (375)
T 3beo_A 168 ENK-----------DESRIFITGNTAIDALKTTVKETYS------HPVLEKLGNNRLVLMTAHRRENLGEPMRNMFRAIK 230 (375)
T ss_dssp TTC-----------CGGGEEECCCHHHHHHHHHCCSSCC------CHHHHTTTTSEEEEEECCCGGGTTHHHHHHHHHHH
T ss_pred cCC-----------CcccEEEECChhHhhhhhhhhhhhh------HHHHHhccCCCeEEEEecccccchhHHHHHHHHHH
Confidence 232 12367899999 8987765321111 123344433 4467789999986 99999999999
Q ss_pred HHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 003029 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (856)
Q Consensus 387 ~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~ 466 (856)
.+.+++|+++ ++ ++.. ++ ..++++++++++. ...|++ .|.++..++..+|+.||++|+|
T Consensus 231 ~l~~~~~~~~----~i-~~~g-----~~-~~~~~~~~~~~~~---------~~~v~~-~g~~~~~~~~~~~~~ad~~v~~ 289 (375)
T 3beo_A 231 RLVDKHEDVQ----VV-YPVH-----MN-PVVRETANDILGD---------YGRIHL-IEPLDVIDFHNVAARSYLMLTD 289 (375)
T ss_dssp HHHHHCTTEE----EE-EECC-----SC-HHHHHHHHHHHTT---------CTTEEE-ECCCCHHHHHHHHHTCSEEEEC
T ss_pred HHHhhCCCeE----EE-EeCC-----CC-HHHHHHHHHHhhc---------cCCEEE-eCCCCHHHHHHHHHhCcEEEEC
Confidence 9988888753 44 3321 11 1344555554321 013664 7889999999999999999999
Q ss_pred CCCcCCChhHHHHHhhcCCCCceEEEeC-CCCchhhc-cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 003029 467 SLRDGMNLVSYEFVACQDLKKGVLILSE-FAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (856)
Q Consensus 467 S~~EG~~Lv~lEama~~~~~~g~lVlSe-~aG~~~~l-g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~ 544 (856)
| |.+++|||||+ .|+|+|. ++|..+.+ ..+|++|+| |++++|++|.++++++ +.+.++.++.+++..
T Consensus 290 s-----g~~~lEA~a~G----~Pvi~~~~~~~~~e~v~~g~g~~v~~-d~~~la~~i~~ll~~~-~~~~~~~~~~~~~~~ 358 (375)
T 3beo_A 290 S-----GGVQEEAPSLG----VPVLVLRDTTERPEGIEAGTLKLAGT-DEETIFSLADELLSDK-EAHDKMSKASNPYGD 358 (375)
T ss_dssp C-----HHHHHHHHHHT----CCEEECSSCCSCHHHHHTTSEEECCS-CHHHHHHHHHHHHHCH-HHHHHHCCCCCTTCC
T ss_pred C-----CChHHHHHhcC----CCEEEecCCCCCceeecCCceEEcCC-CHHHHHHHHHHHHhCh-HhHhhhhhcCCCCCC
Confidence 9 67799999994 8999996 47777766 228999987 9999999999999854 466666555566555
Q ss_pred hcCHHHHHHHHHH
Q 003029 545 THTAQEWAETFVS 557 (856)
Q Consensus 545 ~~~~~~W~~~fl~ 557 (856)
.+++...++.+.+
T Consensus 359 ~~~~~~i~~~~~~ 371 (375)
T 3beo_A 359 GRASERIVEAILK 371 (375)
T ss_dssp SCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHH
Confidence 5665555555443
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.9e-18 Score=195.81 Aligned_cols=240 Identities=9% Similarity=-0.037 Sum_probs=159.9
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHH-HHHhhcCCEEEEeCHHHHHHHHHHHHHH
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL-LRAVLAADLVGFHTYDYARHFVSACTRI 309 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~i-l~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (856)
..|+|+.++.-...+..+.+.. +.++.+++|....- ..+...+....+ ...+..+|.|...+....+.
T Consensus 124 ~~DvIh~~~~~~~~~~~~~~~~--~~p~v~~~h~~~~~-~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~-------- 192 (406)
T 2hy7_A 124 ESDVIVFESGIAVAFIELAKRV--NPAAKLVYRASDGL-STINVASYIEREFDRVAPTLDVIALVSPAMAAE-------- 192 (406)
T ss_dssp HCSEEEEESSGGGGGHHHHHHH--CTTSEEEEEESSCH-HHHTCCHHHHHHHHHHGGGCSEEEESCGGGGGG--------
T ss_pred CCCEEEECCchHHHHHHHHHHh--CCCEEEEEeccchh-hcccccHHHHHHHHHHHHhCCEEEEcCHHHHHH--------
Confidence 4588885443222222333433 45667778864321 111111222222 23345677777665432211
Q ss_pred hCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHH
Q 003029 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (856)
Q Consensus 310 lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l 389 (856)
+.-.+ ++.++|+|||.+.|.+.... ...++++|++|||+.+.||+ ++.+.
T Consensus 193 ---------~~~~~---~i~vipngvd~~~f~~~~~~------------~~~~~~~i~~vGrl~~~Kg~------~~~l~ 242 (406)
T 2hy7_A 193 ---------VVSRD---NVFHVGHGVDHNLDQLGDPS------------PYAEGIHAVAVGSMLFDPEF------FVVAS 242 (406)
T ss_dssp ---------CSCST---TEEECCCCBCTTHHHHHCSC------------SCCSSEEEEEECCTTBCHHH------HHHHH
T ss_pred ---------HHhcC---CEEEEcCCcChHhcCccccc------------ccCCCcEEEEEeccccccCH------HHHHH
Confidence 11112 78899999999988754221 11244899999999999999 45556
Q ss_pred HhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 003029 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 469 (856)
Q Consensus 390 ~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~ 469 (856)
+..|++ .|+++|. ++ +.+ .+.. ..|+| .|.++.+++.++|+.||+||+||..
T Consensus 243 ~~~~~~----~l~ivG~-----g~------------~~~----~~l~--~~V~f-~G~~~~~~l~~~~~~adv~v~ps~~ 294 (406)
T 2hy7_A 243 KAFPQV----TFHVIGS-----GM------------GRH----PGYG--DNVIV-YGEMKHAQTIGYIKHARFGIAPYAS 294 (406)
T ss_dssp HHCTTE----EEEEESC-----SS------------CCC----TTCC--TTEEE-ECCCCHHHHHHHHHTCSEEECCBSC
T ss_pred HhCCCe----EEEEEeC-----ch------------HHh----cCCC--CCEEE-cCCCCHHHHHHHHHhcCEEEECCCc
Confidence 667764 4887763 22 111 1111 13665 7999999999999999999999999
Q ss_pred cCCChhHHHHH-------hhcCCCCceEEEeCCCCchhhc-cCCeEE-ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 003029 470 DGMNLVSYEFV-------ACQDLKKGVLILSEFAGAAQSL-GAGAIL-VNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (856)
Q Consensus 470 EG~~Lv~lEam-------a~~~~~~g~lVlSe~aG~~~~l-g~~g~l-VnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~ 540 (856)
||||++++||| ||+ .|+|+|+. .. +.+|++ |+|.|++++|++|.++++++. +
T Consensus 295 E~~~~~~lEAm~Kl~eYla~G----~PVIas~~-----v~~~~~G~l~v~~~d~~~la~ai~~ll~~~~----------~ 355 (406)
T 2hy7_A 295 EQVPVYLADSSMKLLQYDFFG----LPAVCPNA-----VVGPYKSRFGYTPGNADSVIAAITQALEAPR----------V 355 (406)
T ss_dssp SCCCTTHHHHCHHHHHHHHHT----CCEEEEGG-----GTCSCSSEEEECTTCHHHHHHHHHHHHHCCC----------C
T ss_pred ccCchHHHHHHHHHHHHhhCC----CcEEEehh-----cccCcceEEEeCCCCHHHHHHHHHHHHhCcc----------h
Confidence 99999999999 994 89999987 22 567999 999999999999999999875 1
Q ss_pred HHHHhcCHHHHHHHHHHH
Q 003029 541 THVTTHTAQEWAETFVSE 558 (856)
Q Consensus 541 ~~v~~~~~~~W~~~fl~~ 558 (856)
...+.++|...++++++.
T Consensus 356 ~~~~~~sw~~~a~~~~~~ 373 (406)
T 2hy7_A 356 RYRQCLNWSDTTDRVLDP 373 (406)
T ss_dssp CCSCCCBHHHHHHHHHCG
T ss_pred hhhhcCCHHHHHHHHHHh
Confidence 334668888888777654
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.9e-17 Score=175.60 Aligned_cols=209 Identities=13% Similarity=0.099 Sum_probs=135.4
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeCceEE
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFL 672 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaenG~~i 672 (856)
||+||+||||+++ . .++++++++|++|.+ +|+.|+++|||+...+. .++ +..++|++||+.+
T Consensus 2 li~~DlDGTLl~~--------------~-~i~~~~~~al~~l~~-~Gi~v~iaTGR~~~~~~-~l~-~~~~~i~~nGa~i 63 (259)
T 3zx4_A 2 IVFTDLDGTLLDE--------------R-GELGPAREALERLRA-LGVPVVPVTAKTRKEVE-ALG-LEPPFIVENGGGL 63 (259)
T ss_dssp EEEECCCCCCSCS--------------S-SSCSTTHHHHHHHHH-TTCCEEEBCSSCHHHHH-HTT-CCSSEEEGGGTEE
T ss_pred EEEEeCCCCCcCC--------------C-cCCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHH-HcC-CCCcEEEECCcEE
Confidence 7999999999987 4 688999999999986 79999999999999998 332 2457999999999
Q ss_pred EecCCe----e-----eecccccCChHHHHHHHHHHHHHHh-c-CC-CcEEee---------------------ecceEE
Q 003029 673 RCTTGK----W-----MTTMPEHLNMEWVDSLKHVFEYFTE-R-TP-RSHFEQ---------------------RETSLV 719 (856)
Q Consensus 673 ~~~~~~----w-----~~~~~~~~~~~w~~~v~~i~~~~~~-r-t~-gs~ie~---------------------k~~si~ 719 (856)
...+.. | ..+.....+ .+.+.++++.+.+ . .. ..+... ......
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (259)
T 3zx4_A 64 YLPRDWPVRAGRPKGGYRVVSLAWP---YRKVRARLREAEALAGRPILGYGDLTAEAVARLTGLSREAARRAKAREYDET 140 (259)
T ss_dssp EEETTCSSCCSEEETTEEEEECSCC---HHHHHHHHHHHHHHHTSCCCBGGGBCHHHHHHHHCCCHHHHHHHTCCSSCEE
T ss_pred EeCCCCcccccccCCceEEEEcCCC---HHHHHHHHHHHHHhcCceEEEcCCCCHHHHHHHcCCCHHHhhhhhcccccee
Confidence 864332 0 011111233 2333444433321 0 00 000000 000000
Q ss_pred EEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCc--ceEEEEe
Q 003029 720 WNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAI--DYVLCIG 797 (856)
Q Consensus 720 ~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~--d~vla~G 797 (856)
+.+ .++ ....+.+.+ .. ..+.++.+..++||.|+ ++||.|+++++++++ +++ +++++||
T Consensus 141 ~~~--~~~-----~~~~~~~~l-~~----~~~~~~~s~~~~ei~~~-~~K~~~l~~l~~~~~------i~~~~~~~~~~G 201 (259)
T 3zx4_A 141 LVL--CPE-----EVEAVLEAL-EA----VGLEWTHGGRFYHAAKG-ADKGRAVARLRALWP------DPEEARFAVGLG 201 (259)
T ss_dssp BCC--CTT-----THHHHHHHH-HH----TTCEEEECSSSEEEESS-CCHHHHHHHHHHTCS------SHHHHTSEEEEE
T ss_pred EEe--CcH-----HHHHHHHHH-HH----CCcEEEecCceEEEcCC-CCHHHHHHHHHHHhC------CCCCCceEEEEe
Confidence 000 011 122334444 21 24677777677899999 999999999999999 556 8999999
Q ss_pred cCCcccccccccccccCcceEEeCCCC---c-ccc--CCHHHHHHHHHHHHHHHH
Q 003029 798 HFLGKNCNLPLQFLMQTISTVRLDSSF---L-HYL--RMKMCMRFLSQNYLMMAR 846 (856)
Q Consensus 798 D~~~nDe~M~f~~~~~~~~~v~V~~~~---~-~~l--~~~~~~~~~l~~~~~~~~ 846 (856)
| +.||++| |+++ +++|.++|.. + |.. .+..-|+++++.++...|
T Consensus 202 D-~~nD~~m-~~~a---g~~va~~na~~~~~~~~~~~~~~~gv~~~~~~~~~~~~ 251 (259)
T 3zx4_A 202 D-SLNDLPL-FRAV---DLAVYVGRGDPPEGVLATPAPGPEGFRYAVERYLLPRL 251 (259)
T ss_dssp S-SGGGHHH-HHTS---SEEEECSSSCCCTTCEECSSCHHHHHHHHHHHHTTTC-
T ss_pred C-CHHHHHH-HHhC---CCeEEeCChhhcCCcEEeCCCCchHHHHHHHHHHHhCc
Confidence 9 9999999 8876 5778887643 2 332 234568889988886544
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.71 E-value=5.4e-17 Score=161.96 Aligned_cols=142 Identities=18% Similarity=0.155 Sum_probs=113.7
Q ss_pred cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 003029 361 AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (856)
Q Consensus 361 ~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~p 440 (856)
.++++|+++||+.+.||+..+++|+..+ |++ .|+++|.+. ....+++.+.++ ..+. . ..
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~----~l~i~G~~~-----~~~~l~~~~~~~--~~~l--~----~~ 79 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL----QDE----KLYIVGWFS-----KGDHAERYARKI--MKIA--P----DN 79 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC----TTS----CEEEEBCCC-----TTSTHHHHHHHH--HHHS--C----TT
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC----CCc----EEEEEecCc-----cHHHHHHHHHhh--hccc--C----Cc
Confidence 3678999999999999999999999886 554 477777432 112233333311 1111 0 13
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHH
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 518 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA 518 (856)
|.+ .|.++.+++..+|+.||++++||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|+++ |.|+++++
T Consensus 80 v~~-~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~e~i~~~~~g~~~-~~d~~~l~ 153 (177)
T 2f9f_A 80 VKF-LGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASG----KPVIAVNEGGFKETVINEKTGYLV-NADVNEII 153 (177)
T ss_dssp EEE-EESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTT----CCEEEESSHHHHHHCCBTTTEEEE-CSCHHHHH
T ss_pred EEE-eCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcC----CcEEEeCCCCHHHHhcCCCccEEe-CCCHHHHH
Confidence 664 799999999999999999999999999999999999994 899999998888887 5689999 99999999
Q ss_pred HHHHHHHcCCH
Q 003029 519 NAIARALNMSP 529 (856)
Q Consensus 519 ~ai~~aL~~~~ 529 (856)
++|.++++++.
T Consensus 154 ~~i~~l~~~~~ 164 (177)
T 2f9f_A 154 DAMKKVSKNPD 164 (177)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHHhCHH
Confidence 99999998876
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.4e-16 Score=169.52 Aligned_cols=222 Identities=13% Similarity=0.158 Sum_probs=146.9
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHH-------HhhcCCCCeEEEEcCCCHhhHHHHhcccC-
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLN-------ALCHDPKTTIVVLSGSDRNVLDKNFQEYN- 661 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~-------~L~~d~g~~V~I~SGR~~~~l~~~~~~l~- 661 (856)
.+|+|+||+||||+++ . +++++..+|. +++.++|+.++++|||+...+..++..++
T Consensus 21 ~~kliifDlDGTLlds--------------~--i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~~g~ 84 (289)
T 3gyg_A 21 PQYIVFCDFDETYFPH--------------T--IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKF 84 (289)
T ss_dssp CSEEEEEETBTTTBCS--------------S--CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHTTC
T ss_pred CCeEEEEECCCCCcCC--------------C--CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHhhcc
Confidence 5799999999999986 2 5566666665 34456899999999999999998887764
Q ss_pred ----ceEEeeCceEEEe---cCC-----eeeecccccCChHHHHHHHHHHHHHHhc-C----CCcEEeeecceEEEEeec
Q 003029 662 ----LWLAAENGMFLRC---TTG-----KWMTTMPEHLNMEWVDSLKHVFEYFTER-T----PRSHFEQRETSLVWNYKY 724 (856)
Q Consensus 662 ----lgliaenG~~i~~---~~~-----~w~~~~~~~~~~~w~~~v~~i~~~~~~r-t----~gs~ie~k~~si~~~y~~ 724 (856)
..+++.+|..+.. .+. .|...+... ...+.+.++++.+.++ . ..+..+.+...+.++|+.
T Consensus 85 ~~~~~~~i~~~g~~i~~~~~ng~~~~~~~~~~~~~~~---~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~ 161 (289)
T 3gyg_A 85 RYFPHFIASDLGTEITYFSEHNFGQQDNKWNSRINEG---FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQE 161 (289)
T ss_dssp CBCCSEEEETTTTEEEECCSSSTTEECHHHHHHHHTT---CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEEC
T ss_pred CCCCCeEeecCCceEEEEcCCCcEeecCchhhhhccc---CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEec
Confidence 3477777776654 111 122211111 1245677777766543 1 111223344456778876
Q ss_pred CChhhhHHHHHHHHHHHhcCCCCCCCeEEEEc---------CcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEE
Q 003029 725 ADVEFGRIQARDMLQHLWTGPISNASVEVVQG---------SKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLC 795 (856)
Q Consensus 725 ~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g---------~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla 795 (856)
.++.........+...+ ... .....+... ..++|+.+.+.+|+.++.++++++| ++++++++
T Consensus 162 ~~~~~~~~~~~~~~~~l-~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~------~~~~~~~~ 232 (289)
T 3gyg_A 162 QDEINDKKNLLAIEKIC-EEY--GVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKYN------LNTERAIA 232 (289)
T ss_dssp CCHHHHHHHHHHHHHHH-HHH--TEEEEEEECCGGGTCCTTEEEEEEEESCCSHHHHHHHHHHHHT------CCGGGEEE
T ss_pred cccccchHHHHHHHHHH-HHc--CCCEEEEEccccccCCCCceEEEEEeCCCCHHHHHHHHHHHcC------CChhhEEE
Confidence 65432111112222222 110 112223332 2689999999999999999999999 67899999
Q ss_pred EecCCcccccccccccccCcceEEeCCCC-------ccccCCHHH--HHHHHHHHHHH
Q 003029 796 IGHFLGKNCNLPLQFLMQTISTVRLDSSF-------LHYLRMKMC--MRFLSQNYLMM 844 (856)
Q Consensus 796 ~GD~~~nDe~M~f~~~~~~~~~v~V~~~~-------~~~l~~~~~--~~~~l~~~~~~ 844 (856)
||| +.||++| ++.+ +++|.+++.. .|-+.++.+ +.+.|++++.-
T Consensus 233 ~GD-s~~D~~~-~~~a---g~~~~~~~~~~~~~~~a~~v~~~~~~~gv~~~~~~~~~~ 285 (289)
T 3gyg_A 233 FGD-SGNDVRM-LQTV---GNGYLLKNATQEAKNLHNLITDSEYSKGITNTLKKLIGF 285 (289)
T ss_dssp EEC-SGGGHHH-HTTS---SEEEECTTCCHHHHHHCCCBCSSCHHHHHHHHHHHHTCC
T ss_pred EcC-CHHHHHH-HHhC---CcEEEECCccHHHHHhCCEEcCCCCcCHHHHHHHHHHHH
Confidence 999 9999999 8876 4888888752 277777776 88888887753
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=9.6e-16 Score=180.18 Aligned_cols=199 Identities=13% Similarity=0.025 Sum_probs=149.3
Q ss_pred EEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh--cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEE
Q 003029 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (856)
Q Consensus 326 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~ 403 (856)
.++.++|+++++....+..... .+|+++ ++.++++++||+.+ ||++.+|+||.++++++|+++ |++
T Consensus 344 ~~i~~ipn~~~~~~~~~~~~~~-------~~r~~~~~~~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~----l~i 411 (568)
T 2vsy_A 344 EHVLRLQGAFQPSDTSRVVAEP-------PSRTQCGLPEQGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSV----LWL 411 (568)
T ss_dssp SEEEECSSCSCCCCTTCCCCCC-------CCTGGGTCCTTSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCE----EEE
T ss_pred ceeEcCCCcCCCCCCCCCCCCC-------CCccccCCCCCCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcE----EEE
Confidence 5788999966543221110000 123334 34567889999999 999999999999999998754 777
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhc
Q 003029 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (856)
Q Consensus 404 v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~ 483 (856)
+|. +++... ++++++.+.+.. ...|+ |.|.++.+++..+|+.|||||+||.+ |||++++|||||+
T Consensus 412 ~G~----~g~~~~----~l~~~~~~~~l~-----~~~v~-~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G 476 (568)
T 2vsy_A 412 LSG----PGEADA----RLRAFAHAQGVD-----AQRLV-FMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTG 476 (568)
T ss_dssp ECC----STTHHH----HHHHHHHHTTCC-----GGGEE-EECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTT
T ss_pred ecC----CHHHHH----HHHHHHHHcCCC-----hhHEE-eeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCC
Confidence 762 334333 444444443211 01366 48999999999999999999999999 9999999999994
Q ss_pred CCCCceEEE-------eCCC-------CchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH---Hhc
Q 003029 484 DLKKGVLIL-------SEFA-------GAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV---TTH 546 (856)
Q Consensus 484 ~~~~g~lVl-------Se~a-------G~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v---~~~ 546 (856)
.|+|+ |+.+ |..+.+ .+ |+++++++|.++++++ +.+.++.+++++.+ ..+
T Consensus 477 ----~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v-~~-------~~~~la~~i~~l~~~~-~~~~~~~~~~~~~~~~~~~f 543 (568)
T 2vsy_A 477 ----CPVLTTPGETFAARVAGSLNHHLGLDEMN-VA-------DDAAFVAKAVALASDP-AALTALHARVDVLRRASGVF 543 (568)
T ss_dssp ----CCEEBCCCSSGGGSHHHHHHHHHTCGGGB-CS-------SHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHSSTT
T ss_pred ----CCEEeccCCCchHHHHHHHHHHCCChhhh-cC-------CHHHHHHHHHHHhcCH-HHHHHHHHHHHHhhhcCCCC
Confidence 89999 9988 888776 22 8999999999999864 47777788888888 679
Q ss_pred CHHHHHHHHHHHHHHhHH
Q 003029 547 TAQEWAETFVSELNDTVV 564 (856)
Q Consensus 547 ~~~~W~~~fl~~l~~~~~ 564 (856)
++...++.+++.+++...
T Consensus 544 ~~~~~~~~~~~~y~~~~~ 561 (568)
T 2vsy_A 544 HMDGFADDFGALLQALAR 561 (568)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999888877654
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.63 E-value=2.6e-15 Score=166.88 Aligned_cols=252 Identities=15% Similarity=0.128 Sum_probs=157.0
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHh--hcCCEEEEeCHHHHHHH
Q 003029 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV--LAADLVGFHTYDYARHF 302 (856)
Q Consensus 225 i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~l--l~aDlIgf~t~~~~~~F 302 (856)
+.+..+ .|+|++|++....++..+..+..++|+. ..|.++.+...+. ++.....+.+ ..+|.+...+....+.+
T Consensus 86 ~l~~~~-pDvv~~~~~~~~~~~~~~~a~~~~ip~v-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~~l 161 (376)
T 1v4v_A 86 ALKEMG-ADYVLVHGDTLTTFAVAWAAFLEGIPVG-HVEAGLRSGNLKE--PFPEEANRRLTDVLTDLDFAPTPLAKANL 161 (376)
T ss_dssp HHHHTT-CSEEEEESSCHHHHHHHHHHHHTTCCEE-EETCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHH
T ss_pred HHHHcC-CCEEEEeCChHHHHHHHHHHHHhCCCEE-EEeCCCccccccC--CCchHHHHHHHHHHhceeeCCCHHHHHHH
Confidence 334444 5999999875554543333334467775 4554443222111 1222233332 24788888877665554
Q ss_pred HHHHHHHhCcccCCCceeeCCeeEEEEEeecc-cChhhhhhhhcCCchHHHHHHHHHHhc-CCceEEEeecccccCChHH
Q 003029 303 VSACTRILGFEGTPEGVEDQGRLTRVAAFPIG-IDSERFIRALEINPVQVHIKELQETFA-GRKVMLGVDRLDMIKGIPQ 380 (856)
Q Consensus 303 l~~~~~~lg~~~~~~~v~~~g~~~~v~viP~G-ID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~iIl~V~Rld~~KGi~~ 380 (856)
.. .|. ...++.++|++ +|...+.... ..++++++ ++.+++++||+...||+..
T Consensus 162 ~~-----~g~-----------~~~ki~vi~n~~~d~~~~~~~~---------~~~~~~~~~~~~vl~~~gr~~~~k~~~~ 216 (376)
T 1v4v_A 162 LK-----EGK-----------REEGILVTGQTGVDAVLLAAKL---------GRLPEGLPEGPYVTVTMHRRENWPLLSD 216 (376)
T ss_dssp HT-----TTC-----------CGGGEEECCCHHHHHHHHHHHH---------CCCCTTCCSSCEEEECCCCGGGGGGHHH
T ss_pred HH-----cCC-----------CcceEEEECCchHHHHhhhhhh---------hHHHHhcCCCCEEEEEeCcccchHHHHH
Confidence 32 122 12457788885 4543332110 01222233 3456678999999999999
Q ss_pred HHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 003029 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (856)
Q Consensus 381 ~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~A 460 (856)
+++|++.+.+++|+++ |++++++ ++ .++++++++++. ...|++ .+.++..++..+|+.|
T Consensus 217 ll~a~~~l~~~~~~~~----lv~~~g~----~~---~~~~~l~~~~~~---------~~~v~~-~g~~g~~~~~~~~~~a 275 (376)
T 1v4v_A 217 LAQALKRVAEAFPHLT----FVYPVHL----NP---VVREAVFPVLKG---------VRNFVL-LDPLEYGSMAALMRAS 275 (376)
T ss_dssp HHHHHHHHHHHCTTSE----EEEECCS----CH---HHHHHHHHHHTT---------CTTEEE-ECCCCHHHHHHHHHTE
T ss_pred HHHHHHHHHhhCCCeE----EEEECCC----CH---HHHHHHHHHhcc---------CCCEEE-ECCCCHHHHHHHHHhC
Confidence 9999999988888753 5544322 22 234455555421 014664 6788888999999999
Q ss_pred cEEEECCCCcCCChhHHHHHhhcCCCCceEEEeC-CCCchhhc-cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHH
Q 003029 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (856)
Q Consensus 461 Dv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe-~aG~~~~l-g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~ 537 (856)
|+||.|| +|+ .+|||||+ .|+|++. .+|..+.+ +.+|++|+ .|++++|++|.++|+++ +.++++.+
T Consensus 276 d~~v~~S--~g~---~lEA~a~G----~PvI~~~~~~~~~~~~~~g~g~lv~-~d~~~la~~i~~ll~d~-~~~~~~~~ 343 (376)
T 1v4v_A 276 LLLVTDS--GGL---QEEGAALG----VPVVVLRNVTERPEGLKAGILKLAG-TDPEGVYRVVKGLLENP-EELSRMRK 343 (376)
T ss_dssp EEEEESC--HHH---HHHHHHTT----CCEEECSSSCSCHHHHHHTSEEECC-SCHHHHHHHHHHHHTCH-HHHHHHHH
T ss_pred cEEEECC--cCH---HHHHHHcC----CCEEeccCCCcchhhhcCCceEECC-CCHHHHHHHHHHHHhCh-Hhhhhhcc
Confidence 9999999 543 88999994 8888874 56666655 34688885 59999999999999854 35555443
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=8.4e-15 Score=161.66 Aligned_cols=250 Identities=13% Similarity=0.002 Sum_probs=161.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 003029 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (856)
Q Consensus 231 ~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (856)
..|+|++|.....+...++. +..++|+.+..|..+|..- ...+ ...+|.+...+..
T Consensus 96 ~pDvv~~~~~~~~~~~~~~~-~~~~~p~v~~~~~~~~~~~--------~~~~--~~~~d~v~~~~~~------------- 151 (364)
T 1f0k_A 96 KPDVVLGMGGYVSGPGGLAA-WSLGIPVVLHEQNGIAGLT--------NKWL--AKIATKVMQAFPG------------- 151 (364)
T ss_dssp CCSEEEECSSTTHHHHHHHH-HHTTCCEEEEECSSSCCHH--------HHHH--TTTCSEEEESSTT-------------
T ss_pred CCCEEEEeCCcCchHHHHHH-HHcCCCEEEEecCCCCcHH--------HHHH--HHhCCEEEecChh-------------
Confidence 35999999754333222332 3346788888887664310 1111 1135655432211
Q ss_pred CcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh-cCCc-eEEEeecccccCChHHHHHHHHHH
Q 003029 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRK-VMLGVDRLDMIKGIPQKLLAFEKF 388 (856)
Q Consensus 311 g~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~-iIl~V~Rld~~KGi~~~L~Af~~~ 388 (856)
. +. ++.++|+|||.+.|.+. .. ...+ .. .+++ +++++||+.+.||++.+++|++.+
T Consensus 152 -------~--~~----~~~~i~n~v~~~~~~~~----~~---~~~~--~~~~~~~~il~~~g~~~~~k~~~~li~a~~~l 209 (364)
T 1f0k_A 152 -------A--FP----NAEVVGNPVRTDVLALP----LP---QQRL--AGREGPVRVLVVGGSQGARILNQTMPQVAAKL 209 (364)
T ss_dssp -------S--SS----SCEECCCCCCHHHHTSC----CH---HHHH--TTCCSSEEEEEECTTTCCHHHHHHHHHHHHHH
T ss_pred -------h--cC----CceEeCCccchhhcccc----hh---hhhc--ccCCCCcEEEEEcCchHhHHHHHHHHHHHHHh
Confidence 0 11 35689999998876431 11 1111 11 2445 555667999999999999999987
Q ss_pred HHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 003029 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (856)
Q Consensus 389 l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~ 468 (856)
.+ ++.++.++++ ++ +.++ ++++.+.+. ..|.+ .|.+ +++..+|+.||++|+||
T Consensus 210 ~~-------~~~~l~i~G~----~~-~~~l----~~~~~~~~~-------~~v~~-~g~~--~~~~~~~~~ad~~v~~s- 262 (364)
T 1f0k_A 210 GD-------SVTIWHQSGK----GS-QQSV----EQAYAEAGQ-------PQHKV-TEFI--DDMAAAYAWADVVVCRS- 262 (364)
T ss_dssp GG-------GEEEEEECCT----TC-HHHH----HHHHHHTTC-------TTSEE-ESCC--SCHHHHHHHCSEEEECC-
T ss_pred cC-------CcEEEEEcCC----ch-HHHH----HHHHhhcCC-------CceEE-ecch--hhHHHHHHhCCEEEECC-
Confidence 43 2444334322 22 2333 334433221 13554 6777 78999999999999999
Q ss_pred CcCCChhHHHHHhhcCCCCceEEEeCCCCch-------hhc--cCCeEEECCCC--HHHHHHHHHHHHcCCHHHHHHHHH
Q 003029 469 RDGMNLVSYEFVACQDLKKGVLILSEFAGAA-------QSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRHW 537 (856)
Q Consensus 469 ~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~-------~~l--g~~g~lVnP~d--~~~lA~ai~~aL~~~~~er~~r~~ 537 (856)
| |++++|||||+ .|+|+|..+|.. +.+ +..|++++|.| ++++|++|.++ +++.+.++.+
T Consensus 263 --g-~~~~~EAma~G----~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l---~~~~~~~~~~ 332 (364)
T 1f0k_A 263 --G-ALTVSEIAAAG----LPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW---SRETLLTMAE 332 (364)
T ss_dssp --C-HHHHHHHHHHT----CCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC---CHHHHHHHHH
T ss_pred --c-hHHHHHHHHhC----CCEEEeeCCCCchhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc---CHHHHHHHHH
Confidence 4 99999999994 899999998763 233 33599999988 99999999988 4667778888
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHhH
Q 003029 538 HNFTHVTTHTAQEWAETFVSELNDTV 563 (856)
Q Consensus 538 ~~~~~v~~~~~~~W~~~fl~~l~~~~ 563 (856)
++++++..+++..-++.+++.+++..
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~y~~~~ 358 (364)
T 1f0k_A 333 RARAASIPDATERVANEVSRVARALE 358 (364)
T ss_dssp HHHHTCCTTHHHHHHHHHHHHHTTC-
T ss_pred HHHHhhccCHHHHHHHHHHHHHHHHH
Confidence 88888877877777777766665543
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.1e-14 Score=163.00 Aligned_cols=249 Identities=12% Similarity=-0.004 Sum_probs=159.3
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHH-hhcCCEEEEeCHHHHHHHH
Q 003029 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFV 303 (856)
Q Consensus 225 i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~-ll~aDlIgf~t~~~~~~Fl 303 (856)
+++..+| |+|+++.++++. .++..... |+.+..+. +.. +. +.+. +-.+|.|.+++....+.|.
T Consensus 106 ~l~~~~p-Div~~~~~~~~~--~~~~~~~~--p~~~~~~~-~~~---------~~-~~~~~~~~~d~ii~~S~~~~~~l~ 169 (374)
T 2xci_A 106 FEELSKP-KALIVVEREFWP--SLIIFTKV--PKILVNAY-AKG---------SL-IEKILSKKFDLIIMRTQEDVEKFK 169 (374)
T ss_dssp HHHHHCC-SEEEEESCCCCH--HHHHHCCS--CEEEEEEC-CCC---------CH-HHHHHHTTCSEEEESCHHHHHHHH
T ss_pred HHHHhCC-CEEEEECccCcH--HHHHHHhC--CEEEEEee-cCc---------hH-HHHHHHHhCCEEEECCHHHHHHHH
Confidence 3444455 899888777663 33332221 55443332 211 11 2222 3468999999988776654
Q ss_pred HHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHH
Q 003029 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLL 383 (856)
Q Consensus 304 ~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~ 383 (856)
. +| .. ++.++|+|. |..... + ++.+ .+++++++++. .||+..+|+
T Consensus 170 ~-----~g------------~~-ki~vi~n~~----f~~~~~-~---------~~~l-~~~vi~~~~~~--~k~~~~ll~ 214 (374)
T 2xci_A 170 T-----FG------------AK-RVFSCGNLK----FICQKG-K---------GIKL-KGEFIVAGSIH--TGEVEIILK 214 (374)
T ss_dssp T-----TT------------CC-SEEECCCGG----GCCCCC-S---------CCCC-SSCEEEEEEEC--GGGHHHHHH
T ss_pred H-----cC------------CC-eEEEcCCCc----cCCCcC-h---------hhhh-cCCEEEEEeCC--CchHHHHHH
Confidence 2 12 12 677888872 221110 0 0011 23677888763 589999999
Q ss_pred HHHHHHHhCcCccCceEEEEEEcCCCCChHHH-HHHHHHHHHHHHHhhcccCC--CCcccEEEeCCCCCHHHHHHHHHHc
Q 003029 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEY-QRLTSQVHEIVGRINGRFGT--LTAVPIHHLDRSLDFPALCALYAVT 460 (856)
Q Consensus 384 Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~-~~l~~~l~~lv~~IN~~~g~--~~~~pV~~~~g~v~~~el~aly~~A 460 (856)
||.++.+++|+++ |+++|. +++. .++ ++++.+.+-.+.. .+...|. +.+. .+++..+|+.|
T Consensus 215 A~~~l~~~~p~~~----lvivG~-----g~~~~~~l----~~~~~~~gl~~~~~~~~~~~v~-~~~~--~~dl~~~y~~a 278 (374)
T 2xci_A 215 AFKEIKKTYSSLK----LILVPR-----HIENAKIF----EKKARDFGFKTSFFENLEGDVI-LVDR--FGILKELYPVG 278 (374)
T ss_dssp HHHHHHTTCTTCE----EEEEES-----SGGGHHHH----HHHHHHTTCCEEETTCCCSSEE-ECCS--SSCHHHHGGGE
T ss_pred HHHHHHhhCCCcE----EEEECC-----CHHHHHHH----HHHHHHCCCceEEecCCCCcEE-EECC--HHHHHHHHHhC
Confidence 9999988888865 777762 3432 234 4444443322100 0001344 4553 37899999999
Q ss_pred cEEEECCC-CcCCChhHHHHHhhcCCCCceEEEe-CCCCchhhc---cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHH
Q 003029 461 DVALVTSL-RDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKR 535 (856)
Q Consensus 461 Dv~v~~S~-~EG~~Lv~lEama~~~~~~g~lVlS-e~aG~~~~l---g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r 535 (856)
|++++||. .|++|++++|||||+ .|+|++ +.+|+.+.+ +.+|.++.|.|++++|++|.++|++ +.|.++
T Consensus 279 Dv~vl~ss~~e~gg~~~lEAmA~G----~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll~d--~~r~~m 352 (374)
T 2xci_A 279 KIAIVGGTFVNIGGHNLLEPTCWG----IPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELLSV--KKEIKV 352 (374)
T ss_dssp EEEEECSSSSSSCCCCCHHHHTTT----CCEEECSCCTTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHHHS--CCCCCH
T ss_pred CEEEECCcccCCCCcCHHHHHHhC----CCEEECCCccChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHhH--HHHHHH
Confidence 99888764 577899999999994 788876 567777654 2578889999999999999999985 577788
Q ss_pred HHHHHHHHHhc
Q 003029 536 HWHNFTHVTTH 546 (856)
Q Consensus 536 ~~~~~~~v~~~ 546 (856)
+++++++++++
T Consensus 353 g~~ar~~~~~~ 363 (374)
T 2xci_A 353 EEKSREIKGCY 363 (374)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 88888887653
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.41 E-value=4.6e-12 Score=142.90 Aligned_cols=258 Identities=15% Similarity=0.154 Sum_probs=160.8
Q ss_pred HHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHh--hcCCEEEEeCHHHHHHHH
Q 003029 226 NKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV--LAADLVGFHTYDYARHFV 303 (856)
Q Consensus 226 ~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~l--l~aDlIgf~t~~~~~~Fl 303 (856)
.+..+ +|+|++|+.-...++..+..+..++|+++ +|.+..+...+. |+..++.+-+ ..+|++...+....++|.
T Consensus 107 l~~~k-PDvVi~~g~~~~~~~~~~aa~~~~IPv~h-~~ag~rs~~~~~--~~~~~~~r~~~~~~a~~~~~~se~~~~~l~ 182 (396)
T 3dzc_A 107 LSSEQ-PDVVLVHGDTATTFAASLAAYYQQIPVGH-VEAGLRTGNIYS--PWPEEGNRKLTAALTQYHFAPTDTSRANLL 182 (396)
T ss_dssp HHHHC-CSEEEEETTSHHHHHHHHHHHTTTCCEEE-ETCCCCCSCTTS--STTHHHHHHHHHHTCSEEEESSHHHHHHHH
T ss_pred HHhcC-CCEEEEECCchhHHHHHHHHHHhCCCEEE-EECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHHHHH
Confidence 33445 49999998666656655555566788764 333332222221 3445555554 357999888888777765
Q ss_pred HHHHHHhCcccCCCceeeCCeeEEEEEeec-ccChhhhhhhhc-CCchHHHHHHHHHHhc----CCce-EEEeeccc-cc
Q 003029 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPI-GIDSERFIRALE-INPVQVHIKELQETFA----GRKV-MLGVDRLD-MI 375 (856)
Q Consensus 304 ~~~~~~lg~~~~~~~v~~~g~~~~v~viP~-GID~~~f~~~~~-~~~~~~~~~~lr~~~~----~~~i-Il~V~Rld-~~ 375 (856)
+ .|.. ..+|.++++ ++|...+.+... .. .....+++++++ ++++ ++..+|.. ..
T Consensus 183 ~-----~G~~-----------~~ki~vvGn~~~d~~~~~~~~~~~~--~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~ 244 (396)
T 3dzc_A 183 Q-----ENYN-----------AENIFVTGNTVIDALLAVREKIHTD--MDLQATLESQFPMLDASKKLILVTGHRRESFG 244 (396)
T ss_dssp H-----TTCC-----------GGGEEECCCHHHHHHHHHHHHHHHC--HHHHHHHHHTCTTCCTTSEEEEEECSCBCCCT
T ss_pred H-----cCCC-----------cCcEEEECCcHHHHHHHhhhhcccc--hhhHHHHHHHhCccCCCCCEEEEEECCcccch
Confidence 3 2332 235667765 566443322100 00 011245666653 3454 44566755 34
Q ss_pred CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHH
Q 003029 376 KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCA 455 (856)
Q Consensus 376 KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~a 455 (856)
|++..+++|+..+.+++|+++ ++..+.+ .+. +++.++++. +. ...|++ .+++++.++..
T Consensus 245 ~~~~~ll~A~~~l~~~~~~~~----~v~~~g~----~~~---~~~~l~~~~---~~------~~~v~~-~~~lg~~~~~~ 303 (396)
T 3dzc_A 245 GGFERICQALITTAEQHPECQ----ILYPVHL----NPN---VREPVNKLL---KG------VSNIVL-IEPQQYLPFVY 303 (396)
T ss_dssp THHHHHHHHHHHHHHHCTTEE----EEEECCB----CHH---HHHHHHHHT---TT------CTTEEE-ECCCCHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCce----EEEEeCC----ChH---HHHHHHHHH---cC------CCCEEE-eCCCCHHHHHH
Confidence 889999999999999888753 5544322 132 344444432 11 124664 67889899999
Q ss_pred HHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEe-CCCCchhhcc-CCeEEECCCCHHHHHHHHHHHHcCCHHHHH
Q 003029 456 LYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSLG-AGAILVNPWNITEVANAIARALNMSPEERE 533 (856)
Q Consensus 456 ly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlS-e~aG~~~~lg-~~g~lVnP~d~~~lA~ai~~aL~~~~~er~ 533 (856)
+|+.||++|.+| | |++ +||++|+ .|+|++ +.++..+.+. ..+++|++ |+++++++|.++|+++ +.+.
T Consensus 304 l~~~ad~vv~~S---G-g~~-~EA~a~G----~PvV~~~~~~~~~e~v~~G~~~lv~~-d~~~l~~ai~~ll~d~-~~~~ 372 (396)
T 3dzc_A 304 LMDRAHIILTDS---G-GIQ-EEAPSLG----KPVLVMRETTERPEAVAAGTVKLVGT-NQQQICDALSLLLTDP-QAYQ 372 (396)
T ss_dssp HHHHCSEEEESC---S-GGG-TTGGGGT----CCEEECCSSCSCHHHHHHTSEEECTT-CHHHHHHHHHHHHHCH-HHHH
T ss_pred HHHhcCEEEECC---c-cHH-HHHHHcC----CCEEEccCCCcchHHHHcCceEEcCC-CHHHHHHHHHHHHcCH-HHHH
Confidence 999999999999 6 665 9999994 889988 5666555552 24677755 8999999999999864 3444
Q ss_pred HHHH
Q 003029 534 KRHW 537 (856)
Q Consensus 534 ~r~~ 537 (856)
++.+
T Consensus 373 ~m~~ 376 (396)
T 3dzc_A 373 AMSQ 376 (396)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 4433
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.4e-11 Score=137.32 Aligned_cols=253 Identities=15% Similarity=0.146 Sum_probs=156.6
Q ss_pred HHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhh--cCCEEEEeCHHHHHHHH
Q 003029 226 NKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFV 303 (856)
Q Consensus 226 ~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll--~aDlIgf~t~~~~~~Fl 303 (856)
.+..+ +|+|++|+.-...++..+..+..++|+++ ++.+..+...++ |+.+++.+.++ .+|++...+..+.++|.
T Consensus 110 l~~~k-PD~Vi~~gd~~~~l~~~laA~~~~IPv~h-~~aglrs~~~~~--~~p~~~~r~~~~~~a~~~~~~se~~~~~l~ 185 (403)
T 3ot5_A 110 IAAEN-PDIVLVHGDTTTSFAAGLATFYQQKMLGH-VEAGLRTWNKYS--PFPEEMNRQLTGVMADIHFSPTKQAKENLL 185 (403)
T ss_dssp HHHHC-CSEEEEETTCHHHHHHHHHHHHTTCEEEE-ESCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHHH
T ss_pred HHHcC-CCEEEEECCchhHHHHHHHHHHhCCCEEE-EECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHHHHH
Confidence 34445 49999998655555544444455788753 333332222222 33345555433 37888888888887776
Q ss_pred HHHHHHhCcccCCCceeeCCeeEEEEEeec-ccChhhhhhhhcCCchHHHHHHHHHHhcC-CceEEEeecccc-cCChHH
Q 003029 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPI-GIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDM-IKGIPQ 380 (856)
Q Consensus 304 ~~~~~~lg~~~~~~~v~~~g~~~~v~viP~-GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~iIl~V~Rld~-~KGi~~ 380 (856)
+ .|.. ..+|.++++ ++|...+........ .+++++.+ +.+++.++|... .|++..
T Consensus 186 ~-----~Gi~-----------~~~i~vvGn~~~D~~~~~~~~~~~~------~~~~~l~~~~~vlv~~~r~~~~~~~l~~ 243 (403)
T 3ot5_A 186 A-----EGKD-----------PATIFVTGNTAIDALKTTVQKDYHH------PILENLGDNRLILMTAHRRENLGEPMQG 243 (403)
T ss_dssp H-----TTCC-----------GGGEEECCCHHHHHHHHHSCTTCCC------HHHHSCTTCEEEEECCCCHHHHTTHHHH
T ss_pred H-----cCCC-----------cccEEEeCCchHHHHHhhhhhhcch------HHHHhccCCCEEEEEeCcccccCcHHHH
Confidence 4 2331 235666765 567654432110000 12222333 345667888754 478999
Q ss_pred HHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 003029 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (856)
Q Consensus 381 ~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~A 460 (856)
+++|+..+.+++|+++ ++.++.| .+ .+++.+++..+ . +..|+ +.++++..++..+|+.|
T Consensus 244 ll~a~~~l~~~~~~~~----~v~~~~~----~~---~~~~~l~~~~~---~------~~~v~-l~~~l~~~~~~~l~~~a 302 (403)
T 3ot5_A 244 MFEAVREIVESREDTE----LVYPMHL----NP---AVREKAMAILG---G------HERIH-LIEPLDAIDFHNFLRKS 302 (403)
T ss_dssp HHHHHHHHHHHCTTEE----EEEECCS----CH---HHHHHHHHHHT---T------CTTEE-EECCCCHHHHHHHHHHE
T ss_pred HHHHHHHHHHhCCCce----EEEecCC----CH---HHHHHHHHHhC---C------CCCEE-EeCCCCHHHHHHHHHhc
Confidence 9999999999998753 5544332 12 23344444321 1 12465 47888999999999999
Q ss_pred cEEEECCCCcCCChhHHHHHhhcCCCCceEEEe-CCCCchhhc-cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHH
Q 003029 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRH 536 (856)
Q Consensus 461 Dv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlS-e~aG~~~~l-g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~ 536 (856)
|++|.+| |-+.+||++|+ .|+|++ ..++..+.+ ..++++|.+ |+++++++|.++|+++ +.+.++.
T Consensus 303 d~vv~~S-----Gg~~~EA~a~g----~PvV~~~~~~~~~e~v~~g~~~lv~~-d~~~l~~ai~~ll~~~-~~~~~m~ 369 (403)
T 3ot5_A 303 YLVFTDS-----GGVQEEAPGMG----VPVLVLRDTTERPEGIEAGTLKLIGT-NKENLIKEALDLLDNK-ESHDKMA 369 (403)
T ss_dssp EEEEECC-----HHHHHHGGGTT----CCEEECCSSCSCHHHHHHTSEEECCS-CHHHHHHHHHHHHHCH-HHHHHHH
T ss_pred CEEEECC-----ccHHHHHHHhC----CCEEEecCCCcchhheeCCcEEEcCC-CHHHHHHHHHHHHcCH-HHHHHHH
Confidence 9999888 33449999994 888888 555555555 236888876 9999999999999864 3444443
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.09 E-value=7.5e-11 Score=124.72 Aligned_cols=187 Identities=8% Similarity=0.070 Sum_probs=105.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC---CCHhhHHHHhcccCc----
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQEYNL---- 662 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~l~l---- 662 (856)
++|+|+||+||||++. ..++++++++|++|.+ .|+.|+++|| |+...+.+.+..+++
T Consensus 5 ~~kli~~DlDGTLl~~---------------~~~~~~~~~ai~~l~~-~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~ 68 (266)
T 3pdw_A 5 TYKGYLIDLDGTMYNG---------------TEKIEEACEFVRTLKD-RGVPYLFVTNNSSRTPKQVADKLVSFDIPATE 68 (266)
T ss_dssp CCSEEEEECSSSTTCH---------------HHHHHHHHHHHHHHHH-TTCCEEEEESCCSSCHHHHHHHHHHTTCCCCG
T ss_pred cCCEEEEeCcCceEeC---------------CEeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCH
Confidence 4899999999999975 2356789999999997 7999999988 777888787777654
Q ss_pred -eEEeeCceEEEe--cCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHH
Q 003029 663 -WLAAENGMFLRC--TTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQ 739 (856)
Q Consensus 663 -gliaenG~~i~~--~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~ 739 (856)
++++.||+.+.. ......... .... ..+.+.++.+ |..+........+........+ ....+...
T Consensus 69 ~~ii~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 136 (266)
T 3pdw_A 69 EQVFTTSMATAQHIAQQKKDASVY-VIGE----EGIRQAIEEN-----GLTFGGENADFVVVGIDRSITY--EKFAVGCL 136 (266)
T ss_dssp GGEEEHHHHHHHHHHHHCTTCEEE-EESC----HHHHHHHHHT-----TCEECCTTCSEEEECCCTTCCH--HHHHHHHH
T ss_pred HHccCHHHHHHHHHHhhCCCCEEE-EEeC----hhHHHHHHHc-----CCccCCCCCCEEEEeCCCCCCH--HHHHHHHH
Confidence 356666654421 000000011 0001 2233333322 1111111111111111111111 11112222
Q ss_pred HHhcC---CCCCCCeEE------EEc----------CcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCC
Q 003029 740 HLWTG---PISNASVEV------VQG----------SKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL 800 (856)
Q Consensus 740 ~L~~~---~~~~~~v~v------~~g----------~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~ 800 (856)
.+... +..+..... ..+ ....|+...+..|+.+++.+++++| ++++++++||| +
T Consensus 137 ~l~~~~~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg------i~~~~~~~iGD-~ 209 (266)
T 3pdw_A 137 AIRNGARFISTNGDIAIPTERGLLPGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLG------TDVSETLMVGD-N 209 (266)
T ss_dssp HHHTTCEEEESCCCCEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSSHHHHHHHHHHT------CCGGGEEEEES-C
T ss_pred HHHCCCeEEEEcCCceeECCCceEecchHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcC------CChhhEEEECC-C
Confidence 22111 001111100 111 0135677889999999999999999 67899999999 9
Q ss_pred -cccccccccccc
Q 003029 801 -GKNCNLPLQFLM 812 (856)
Q Consensus 801 -~nDe~M~f~~~~ 812 (856)
.||++| ++.++
T Consensus 210 ~~~Di~~-~~~aG 221 (266)
T 3pdw_A 210 YATDIMA-GINAG 221 (266)
T ss_dssp TTTHHHH-HHHHT
T ss_pred cHHHHHH-HHHCC
Confidence 799999 88775
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=1.9e-10 Score=121.70 Aligned_cols=208 Identities=11% Similarity=0.068 Sum_probs=120.2
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEc---CCCHhhHHHHhcccCc---
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYNL--- 662 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~l~l--- 662 (856)
.+.+.|+||+||||++. ..+++.++++|++|.+ .|..|+++| ||+...+.+.+..+++
T Consensus 15 ~~~~~v~~DlDGTLl~~---------------~~~~~~~~~~l~~l~~-~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~ 78 (271)
T 1vjr_A 15 DKIELFILDMDGTFYLD---------------DSLLPGSLEFLETLKE-KNKRFVFFTNNSSLGAQDYVRKLRNMGVDVP 78 (271)
T ss_dssp GGCCEEEECCBTTTEET---------------TEECTTHHHHHHHHHH-TTCEEEEEESCTTSCHHHHHHHHHHTTCCCC
T ss_pred cCCCEEEEcCcCcEEeC---------------CEECcCHHHHHHHHHH-cCCeEEEEECCCCCCHHHHHHHHHHcCCCCC
Confidence 45789999999999986 2366889999999986 799999999 9999999998888753
Q ss_pred --eEEeeCceEEEec-----CCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHH
Q 003029 663 --WLAAENGMFLRCT-----TGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQAR 735 (856)
Q Consensus 663 --gliaenG~~i~~~-----~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~ 735 (856)
.++++||+.+... +...... .. ..+.+.++.+ |..+........+........+ ....
T Consensus 79 ~~~ii~~~~~~~~~~~~~~~~~~~~~~----~~----~~~~~~l~~~-----g~~~~~~~~~~~~~~~~~~~~~--~~~~ 143 (271)
T 1vjr_A 79 DDAVVTSGEITAEHMLKRFGRCRIFLL----GT----PQLKKVFEAY-----GHVIDEENPDFVVLGFDKTLTY--ERLK 143 (271)
T ss_dssp GGGEEEHHHHHHHHHHHHHCSCEEEEE----SC----HHHHHHHHHT-----TCEECSSSCSEEEECCCTTCCH--HHHH
T ss_pred hhhEEcHHHHHHHHHHHhCCCCeEEEE----cC----HHHHHHHHHc-----CCccCCCCCCEEEEeCCCCcCH--HHHH
Confidence 3677777654310 1111000 01 1222222221 1111110011111111111111 1122
Q ss_pred HHHHHHhcCC----CCCCCeEE------EEc----------CcEEEE-EeCCCCHHHHHHHHHHHhCcCCcCCCCcceEE
Q 003029 736 DMLQHLWTGP----ISNASVEV------VQG----------SKSVEV-RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVL 794 (856)
Q Consensus 736 el~~~L~~~~----~~~~~v~v------~~g----------~~~vEV-~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vl 794 (856)
+.+..+ ..- +.+..... ... ....|. .+.+.+|+.+++.+++++| +++++++
T Consensus 144 ~~l~~l-~~~~~~i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lg------i~~~e~i 216 (271)
T 1vjr_A 144 KACILL-RKGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFG------VPKERMA 216 (271)
T ss_dssp HHHHHH-TTTCEEEESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHT------CCGGGEE
T ss_pred HHHHHH-HCCCeEEEECCCccccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhC------CCCceEE
Confidence 333333 210 01110000 000 012355 7889999999999999999 6789999
Q ss_pred EEecCC-cccccccccccccCcceEEeCCC-------------CccccCCHHHHHHHH
Q 003029 795 CIGHFL-GKNCNLPLQFLMQTISTVRLDSS-------------FLHYLRMKMCMRFLS 838 (856)
Q Consensus 795 a~GD~~-~nDe~M~f~~~~~~~~~v~V~~~-------------~~~~l~~~~~~~~~l 838 (856)
+||| + .||++| .+.++- .+|.|... +.|.+.+..++.++|
T Consensus 217 ~iGD-~~~nDi~~-a~~aG~--~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l 270 (271)
T 1vjr_A 217 MVGD-RLYTDVKL-GKNAGI--VSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 270 (271)
T ss_dssp EEES-CHHHHHHH-HHHHTC--EEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred EECC-CcHHHHHH-HHHcCC--eEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 9999 9 599999 887743 24555321 226677777776654
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.04 E-value=1.2e-10 Score=123.27 Aligned_cols=212 Identities=12% Similarity=0.083 Sum_probs=116.5
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC---CCHhhHHHHhcccCc----
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQEYNL---- 662 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~l~l---- 662 (856)
++|+|+||+||||++.. .+.++++++|++|.+ .|+.|+++|| |+...+.+.+..+++
T Consensus 7 ~~kli~~DlDGTLl~~~---------------~~~~~~~~ai~~l~~-~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~ 70 (268)
T 3qgm_A 7 DKKGYIIDIDGVIGKSV---------------TPIPEGVEGVKKLKE-LGKKIIFVSNNSTRSRRILLERLRSFGLEVGE 70 (268)
T ss_dssp CCSEEEEECBTTTEETT---------------EECHHHHHHHHHHHH-TTCEEEEEECCSSSCHHHHHHHHHHTTCCCCG
T ss_pred cCCEEEEcCcCcEECCC---------------EeCcCHHHHHHHHHH-cCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCH
Confidence 58999999999999862 256789999999986 7999999999 788888888877654
Q ss_pred -eEEeeCceEEEe--cCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEE-eeecceEEEEeecCChhhhHHHHHHHH
Q 003029 663 -WLAAENGMFLRC--TTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF-EQRETSLVWNYKYADVEFGRIQARDML 738 (856)
Q Consensus 663 -gliaenG~~i~~--~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~i-e~k~~si~~~y~~~d~e~~~~qa~el~ 738 (856)
.+++.||+.... ......... .... ..+...+... |..+ ........+.-......+. ...+..
T Consensus 71 ~~ii~~~~~~~~~~~~~~~~~~~~-~~~~----~~l~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 138 (268)
T 3qgm_A 71 DEILVATYATARFIAREKPNAKVF-TTGE----EGLIEELRLA-----GLEIVDYDEAEYLVVGSNRKINFE--LMTKAL 138 (268)
T ss_dssp GGEEEHHHHHHHHHHHHSTTCEEE-ECCC----HHHHHHHHHT-----TCEECCTTTCSEEEECCCTTCBHH--HHHHHH
T ss_pred HHeeCHHHHHHHHHHhhCCCCeEE-EEcC----HHHHHHHHHc-----CCeecCCCCCCEEEEecCCCCCHH--HHHHHH
Confidence 477777764321 000000000 0001 1222222221 1111 1111111111000011111 011111
Q ss_pred HHHhcC---CCCCCCeEE------EEcC----------cEEEE-EeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEec
Q 003029 739 QHLWTG---PISNASVEV------VQGS----------KSVEV-RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (856)
Q Consensus 739 ~~L~~~---~~~~~~v~v------~~g~----------~~vEV-~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD 798 (856)
..+... +..+..... ..+. ...|+ ...+-.|+.+++.+++++| ++++++++|||
T Consensus 139 ~~l~~~~~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~------~~~~~~~~vGD 212 (268)
T 3qgm_A 139 RACLRGIRYIATNPDRIFPAEDGPIPGTGMIIGALYWMTGREPDVVVGKPSEVIMREALDILG------LDAKDVAVVGD 212 (268)
T ss_dssp HHHHHTCEEEESCCCCEEEETTEEEECTHHHHHHHHHHHSCCCSEECSTTSHHHHHHHHHHHT------CCGGGEEEEES
T ss_pred HHHhCCCcEEEEeCCCcccCCCCceeChHHHHHHHHHHhCCCcceecCCCCHHHHHHHHHHhC------CCchhEEEECC
Confidence 222011 111111110 1111 12355 6778899999999999999 67899999999
Q ss_pred CC-cccccccccccccCcceEEeC--CC---------------CccccCCHHHHHHHHH
Q 003029 799 FL-GKNCNLPLQFLMQTISTVRLD--SS---------------FLHYLRMKMCMRFLSQ 839 (856)
Q Consensus 799 ~~-~nDe~M~f~~~~~~~~~v~V~--~~---------------~~~~l~~~~~~~~~l~ 839 (856)
+ .||++| .+.++-. +|.|. +. +.|.+.+..++.++|+
T Consensus 213 -~~~~Di~~-~~~~g~~--~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el~~~l~ 267 (268)
T 3qgm_A 213 -QIDVDVAA-GKAIGAE--TVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDMVEALE 267 (268)
T ss_dssp -CTTTHHHH-HHHHTCE--EEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHHHHTC-
T ss_pred -CchHHHHH-HHHCCCc--EEEECCCCCCHHHHHhhccccCCCCCEEECCHHHHHHHHh
Confidence 9 699999 7776533 45553 21 1266777777766553
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.04 E-value=5.2e-11 Score=124.90 Aligned_cols=209 Identities=12% Similarity=0.039 Sum_probs=114.4
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEc---CCCHhhHHHHhcccCc----
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYNL---- 662 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~l~l---- 662 (856)
.+|+|+||+||||+++.. ....+++.+.++++.|.+ .|+.++++| ||+...+.+.+..+++
T Consensus 11 ~~k~i~fDlDGTLl~s~~-----------~~~~~~~~~~~a~~~l~~-~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~~~ 78 (271)
T 2x4d_A 11 GVRGVLLDISGVLYDSGA-----------GGGTAIAGSVEAVARLKR-SRLKVRFCTNESAASRAELVGQLQRLGFDISE 78 (271)
T ss_dssp TCCEEEECCBTTTEECCT-----------TTCEECTTHHHHHHHHHH-SSSEEEEECCCCSSCHHHHHHHHHHTTCCCCG
T ss_pred cCCEEEEeCCCeEEecCC-----------CCCccCcCHHHHHHHHHH-CCCcEEEEECCCCCCHHHHHHHHHHCCCCCCH
Confidence 479999999999998520 012366788999999986 799999999 9999988888877543
Q ss_pred -eEEeeCceEEEe--cCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHH
Q 003029 663 -WLAAENGMFLRC--TTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQ 739 (856)
Q Consensus 663 -gliaenG~~i~~--~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~ 739 (856)
.+++.+|+.+.. ....+..... .+.+.++++..... ...+.+ +...+..+......+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~l~ 141 (271)
T 2x4d_A 79 QEVTAPAPAACQILKERGLRPYLLI-------HDGVRSEFDQIDTS---------NPNCVV-IADAGESFSYQNMNNAFQ 141 (271)
T ss_dssp GGEECHHHHHHHHHHHHTCCEEEEC-------CGGGGGGGTTSCCS---------SCSEEE-ECCCGGGCCHHHHHHHHH
T ss_pred HHeecHHHHHHHHHHHcCCEEEEEe-------CHHHHHHHHHcCCC---------CCCEEE-EecCCCCcCHHHHHHHHH
Confidence 355555543211 0000000000 00011111111000 000000 000000000001111222
Q ss_pred HHhcCCCCCCCeEEEE------------------------cCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEE
Q 003029 740 HLWTGPISNASVEVVQ------------------------GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLC 795 (856)
Q Consensus 740 ~L~~~~~~~~~v~v~~------------------------g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla 795 (856)
.+.... ...+ +.. +....|+.+.+.+|+.+++.+++++| ++++++++
T Consensus 142 ~l~~~~--~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lg------i~~~~~i~ 212 (271)
T 2x4d_A 142 VLMELE--KPVL-ISLGKGRYYAATSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIG------VEAHQAVM 212 (271)
T ss_dssp HHHHCS--SCCE-EEECCCSEEEETTEEEECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHT------CCGGGEEE
T ss_pred HHHhcC--CCeE-EEEcCCcccccCCCcccChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhC------CCcceEEE
Confidence 221100 0001 000 01123667788899999999999999 67899999
Q ss_pred EecCCc-ccccccccccccCcceEEeCCC-------------CccccCCHHHHHHHHHH
Q 003029 796 IGHFLG-KNCNLPLQFLMQTISTVRLDSS-------------FLHYLRMKMCMRFLSQN 840 (856)
Q Consensus 796 ~GD~~~-nDe~M~f~~~~~~~~~v~V~~~-------------~~~~l~~~~~~~~~l~~ 840 (856)
||| +. ||++| ++.++-. ++.|... +.+.+.+..++..+|.+
T Consensus 213 iGD-~~~nDi~~-a~~aG~~--~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 267 (271)
T 2x4d_A 213 IGD-DIVGDVGG-AQRCGMR--ALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQ 267 (271)
T ss_dssp EES-CTTTTHHH-HHHTTCE--EEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHHHHH
T ss_pred ECC-CcHHHHHH-HHHCCCc--EEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHHHHh
Confidence 999 98 99999 8877532 3344221 12677888888776654
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=2.4e-08 Score=110.07 Aligned_cols=244 Identities=13% Similarity=0.040 Sum_probs=151.6
Q ss_pred HHHHhcCCCCEEEEeCccch--hH-HHHHHhc-CCCCeEEEEEecCCCchhhhhcCcccHHH-HHHhhcCCEEEEeCHHH
Q 003029 224 VVNKHYKDGDVVWCHDYHLM--FL-PKCLKEY-NSDMKVGWFLHTPFPSSEIHRTLPSRSDL-LRAVLAADLVGFHTYDY 298 (856)
Q Consensus 224 ~i~~~~~~~DvIwvHDyhl~--ll-p~~lr~~-~~~~~i~~flH~PfP~~e~fr~lp~~~~i-l~~ll~aDlIgf~t~~~ 298 (856)
.+....+++|+|+++-..+. .+ ..+++.. ..++++.+.+|--||-.- ..-+..... ...+-.||.|..+++..
T Consensus 67 ~~~~~~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~--~~~~~~~~~E~~~y~~aD~Ii~~S~~~ 144 (339)
T 3rhz_A 67 GIVAGLRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMF--SGNFYLMDRTIAYYNKADVVVAPSQKM 144 (339)
T ss_dssp HHTTTCCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHC--GGGGGGHHHHHHHHTTCSEEEESCHHH
T ss_pred HHHhcCCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhC--ccchhhHHHHHHHHHHCCEEEECCHHH
Confidence 35556788999999876642 22 2333332 238999999998765221 000011111 22355799999999876
Q ss_pred HHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeeccc-ChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCC
Q 003029 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKG 377 (856)
Q Consensus 299 ~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GI-D~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KG 377 (856)
.+.+.+ .|.. ..++. +.++ |.. .+ .+. ....++++|+++||+....+
T Consensus 145 ~~~l~~-----~G~~-----------~~ki~--~~~~~~~~--~~---~~~---------~~~~~~~~i~yaG~l~k~~~ 192 (339)
T 3rhz_A 145 IDKLRD-----FGMN-----------VSKTV--VQGMWDHP--TQ---APM---------FPAGLKREIHFPGNPERFSF 192 (339)
T ss_dssp HHHHHH-----TTCC-----------CSEEE--ECCSCCCC--CC---CCC---------CCCEEEEEEEECSCTTTCGG
T ss_pred HHHHHH-----cCCC-----------cCcee--ecCCCCcc--Cc---ccc---------cccCCCcEEEEeCCcchhhH
Confidence 655542 1321 12443 3333 211 00 000 01134678999999985322
Q ss_pred hHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHH
Q 003029 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 457 (856)
Q Consensus 378 i~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly 457 (856)
+.. + .|++ .|+++|.+. +. + .. .|+| .|.++.++++.+|
T Consensus 193 L~~-------l---~~~~----~f~ivG~G~-----~~------------~-------l~--nV~f-~G~~~~~el~~~l 231 (339)
T 3rhz_A 193 VKE-------W---KYDI----PLKVYTWQN-----VE------------L-------PQ--NVHK-INYRPDEQLLMEM 231 (339)
T ss_dssp GGG-------C---CCSS----CEEEEESCC-----CC------------C-------CT--TEEE-EECCCHHHHHHHH
T ss_pred HHh-------C---CCCC----eEEEEeCCc-----cc------------C-------cC--CEEE-eCCCCHHHHHHHH
Confidence 211 1 3554 488887532 10 0 01 3775 7999999999999
Q ss_pred HHccEEEECCCCcC---------CChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHHc
Q 003029 458 AVTDVALVTSLRDG---------MNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN 526 (856)
Q Consensus 458 ~~ADv~v~~S~~EG---------~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai~~aL~ 526 (856)
+.||+.++. .++ ++..+.|||||+ .|+|++..++.++.+ +..|+.++ +.++++++|..+
T Consensus 232 ~~~~~~lv~--~~~~~~~y~~~~~P~Kl~eymA~G----~PVI~~~~~~~~~~v~~~~~G~~~~--~~~e~~~~i~~l-- 301 (339)
T 3rhz_A 232 SQGGFGLVW--MDDKDKEYQSLYCSYKLGSFLAAG----IPVIVQEGIANQELIENNGLGWIVK--DVEEAIMKVKNV-- 301 (339)
T ss_dssp HTEEEEECC--CCGGGHHHHTTCCCHHHHHHHHHT----CCEEEETTCTTTHHHHHHTCEEEES--SHHHHHHHHHHC--
T ss_pred HhCCEEEEE--CCCchhHHHHhcChHHHHHHHHcC----CCEEEccChhHHHHHHhCCeEEEeC--CHHHHHHHHHHh--
Confidence 999999987 233 477899999994 899999999988888 45689887 578888888764
Q ss_pred CCHHHHHHHHHHHHHHHHhcCHHHHHH
Q 003029 527 MSPEEREKRHWHNFTHVTTHTAQEWAE 553 (856)
Q Consensus 527 ~~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (856)
.++++.++.+++++..+......-.+
T Consensus 302 -~~~~~~~m~~na~~~a~~~~~~~f~k 327 (339)
T 3rhz_A 302 -NEDEYIELVKNVRSFNPILRKGFFTR 327 (339)
T ss_dssp -CHHHHHHHHHHHHHHTHHHHTTHHHH
T ss_pred -CHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 46678777777777655543333333
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=98.95 E-value=1.4e-09 Score=115.15 Aligned_cols=195 Identities=8% Similarity=0.051 Sum_probs=109.9
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEc---CCCHhhHHHHhcccCc----
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYNL---- 662 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~l~l---- 662 (856)
++|+|+||+||||++. +..+ +.++++|++|.+ .|+.|+++| ||+...+.+.+..+++
T Consensus 4 ~~kli~~DlDGTLl~~--------------~~~i-~~~~eal~~l~~-~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~ 67 (264)
T 3epr_A 4 AYKGYLIDLDGTIYKG--------------KSRI-PAGERFIERLQE-KGIPYMLVTNNTTRTPESVQEMLRGFNVETPL 67 (264)
T ss_dssp CCCEEEECCBTTTEET--------------TEEC-HHHHHHHHHHHH-HTCCEEEEECCCSSCHHHHHHHHHTTTCCCCG
T ss_pred CCCEEEEeCCCceEeC--------------CEEC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHCCCCCCh
Confidence 5799999999999987 3456 799999999986 799999999 8999999888887754
Q ss_pred -eEEeeCceEEEe--cCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHH
Q 003029 663 -WLAAENGMFLRC--TTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQ 739 (856)
Q Consensus 663 -gliaenG~~i~~--~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~ 739 (856)
.+++.||+.+.. ......... .... +.+.+.++.+ |..+........+........+ ....+...
T Consensus 68 ~~ii~~~~~~~~~l~~~~~~~~~~-~~~~----~~l~~~l~~~-----g~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~ 135 (264)
T 3epr_A 68 ETIYTATMATVDYMNDMNRGKTAY-VIGE----EGLKKAIADA-----GYVEDTKNPAYVVVGLDWNVTY--DKLATATL 135 (264)
T ss_dssp GGEEEHHHHHHHHHHHHTCCSEEE-EESC----HHHHHHHHHT-----TCEECSSSCSEEEECCCTTCCH--HHHHHHHH
T ss_pred hheecHHHHHHHHHHHhCCCCeEE-EECC----HHHHHHHHHc-----CCcccCCcCCEEEEeCCCCCCH--HHHHHHHH
Confidence 367777765431 100111111 0011 2233333322 2112111111111111111111 11112222
Q ss_pred HHhcC---CCCCCCeEEEEcC----------------cEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCC
Q 003029 740 HLWTG---PISNASVEVVQGS----------------KSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL 800 (856)
Q Consensus 740 ~L~~~---~~~~~~v~v~~g~----------------~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~ 800 (856)
.+... +..+......... ...|....+-.|+.+++.++++++ ++++++++||| +
T Consensus 136 ~l~~~~~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~------~~~~~~~~vGD-~ 208 (264)
T 3epr_A 136 AIQNGALFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILN------IPRNQAVMVGD-N 208 (264)
T ss_dssp HHHTTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHSCCCEECSTTSHHHHHHHHHHHT------SCGGGEEEEES-C
T ss_pred HHHCCCeEEEEcCCccccCCCceecCccHHHHHHHHHhCCCcccCCCCCHHHHHHHHHHhC------cCcccEEEECC-C
Confidence 22111 0111111100000 013445566778888999999999 67899999999 9
Q ss_pred -cccccccccccccCcceEEeCC
Q 003029 801 -GKNCNLPLQFLMQTISTVRLDS 822 (856)
Q Consensus 801 -~nDe~M~f~~~~~~~~~v~V~~ 822 (856)
.||++| .+.++- -+|.|..
T Consensus 209 ~~~Di~~-a~~aG~--~~~~v~~ 228 (264)
T 3epr_A 209 YLTDIMA-GINNDI--DTLLVTT 228 (264)
T ss_dssp TTTHHHH-HHHHTC--EEEEETT
T ss_pred cHHHHHH-HHHCCC--eEEEECC
Confidence 799999 776642 3666643
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=4.3e-09 Score=104.96 Aligned_cols=142 Identities=18% Similarity=0.170 Sum_probs=100.6
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeC
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAEN 668 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaen 668 (856)
..+|+|+||+||||++....- ....+....++++..++|++|.+ .|+.++|+|||+...+...+..+++.-.. +
T Consensus 6 ~~ik~i~~DlDGTL~~~~~~~----~~~~~~~~~~~~~~~~~l~~L~~-~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~-~ 79 (180)
T 1k1e_A 6 ENIKFVITDVDGVLTDGQLHY----DANGEAIKSFHVRDGLGIKMLMD-ADIQVAVLSGRDSPILRRRIADLGIKLFF-L 79 (180)
T ss_dssp GGCCEEEEECTTTTSCSEEEE----ETTEEEEEEEEHHHHHHHHHHHH-TTCEEEEEESCCCHHHHHHHHHHTCCEEE-E
T ss_pred hCCeEEEEeCCCCcCCCCeee----ccCcceeeeeccchHHHHHHHHH-CCCeEEEEeCCCcHHHHHHHHHcCCceee-c
Confidence 357999999999999862100 00000122467789999999986 69999999999999988888776542110 0
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCC
Q 003029 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 748 (856)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~ 748 (856)
|
T Consensus 80 ~------------------------------------------------------------------------------- 80 (180)
T 1k1e_A 80 G------------------------------------------------------------------------------- 80 (180)
T ss_dssp S-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 0
Q ss_pred CCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC----
Q 003029 749 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF---- 824 (856)
Q Consensus 749 ~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~---- 824 (856)
..+|+.+++.++++++ ++++.+++||| +.||.+| ++.+ ++++.+++..
T Consensus 81 -----------------~k~k~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~-~~~a---g~~~~~~~~~~~~~ 132 (180)
T 1k1e_A 81 -----------------KLEKETACFDLMKQAG------VTAEQTAYIGD-DSVDLPA-FAAC---GTSFAVADAPIYVK 132 (180)
T ss_dssp -----------------CSCHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHH-HHHS---SEEEECTTSCHHHH
T ss_pred -----------------CCCcHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHH-HHHc---CCeEEeCCccHHHH
Confidence 0579999999999998 66899999999 9999999 6655 6677776531
Q ss_pred --c-cccCCHH---HHHHHHHHHHH
Q 003029 825 --L-HYLRMKM---CMRFLSQNYLM 843 (856)
Q Consensus 825 --~-~~l~~~~---~~~~~l~~~~~ 843 (856)
+ |-+.++. .++.+++.++.
T Consensus 133 ~~ad~v~~~~~~~g~~~~~~~~~l~ 157 (180)
T 1k1e_A 133 NAVDHVLSTHGGKGAFREMSDMILQ 157 (180)
T ss_dssp TTSSEECSSCTTTTHHHHHHHHHHH
T ss_pred hhCCEEecCCCCCcHHHHHHHHHHH
Confidence 2 6666542 23366666654
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=98.88 E-value=3.7e-10 Score=116.38 Aligned_cols=46 Identities=11% Similarity=-0.065 Sum_probs=41.2
Q ss_pred EEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCC-cccccccccccc
Q 003029 759 SVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL-GKNCNLPLQFLM 812 (856)
Q Consensus 759 ~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~-~nDe~M~f~~~~ 812 (856)
..|+.+.+.+|+.+++++++++| ++++++++||| + .||++| ++.++
T Consensus 168 ~~~~~~~~kpk~~~~~~~~~~lg------i~~~~~i~iGD-~~~nDi~~-~~~aG 214 (250)
T 2c4n_A 168 GRKPFYVGKPSPWIIRAALNKMQ------AHSEETVIVGD-NLRTDILA-GFQAG 214 (250)
T ss_dssp CCCCEECSTTSTHHHHHHHHHHT------CCGGGEEEEES-CTTTHHHH-HHHTT
T ss_pred CCCceEeCCCCHHHHHHHHHHcC------CCcceEEEECC-CchhHHHH-HHHcC
Confidence 35778899999999999999999 67899999999 9 799999 88774
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.82 E-value=1.7e-11 Score=134.80 Aligned_cols=210 Identities=8% Similarity=-0.020 Sum_probs=115.1
Q ss_pred HHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCH---hhHH---HHh-
Q 003029 585 RYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR---NVLD---KNF- 657 (856)
Q Consensus 585 ~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~---~~l~---~~~- 657 (856)
.+.....|+|+||+||||++.. . .++|.++.. .|+.|+++|||+. ..+. .++
T Consensus 15 ~~~~~~~kli~fDlDGTLld~~--------------~------~~~l~~~~~-~g~~~~~~tGR~~~~~~~~~~~~~~~~ 73 (332)
T 1y8a_A 15 ENLYFQGHMFFTDWEGPWILTD--------------F------ALELCMAVF-NNARFFSNLSEYDDYLAYEVRREGYEA 73 (332)
T ss_dssp -----CCCEEEECSBTTTBCCC--------------H------HHHHHHHHH-CCHHHHHHHHHHHHHHHHTTCCTTCCT
T ss_pred hhhCCCceEEEEECcCCCcCcc--------------H------HHHHHHHHH-CCCEEEEEcCCCchhhhhhhhccCeec
Confidence 3444567999999999999862 1 167777775 5789999999998 6665 555
Q ss_pred -cccC--ceEEeeCceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEE-eeec----------ceE--EEE
Q 003029 658 -QEYN--LWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF-EQRE----------TSL--VWN 721 (856)
Q Consensus 658 -~~l~--lgliaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~i-e~k~----------~si--~~~ 721 (856)
..++ ..+++.||+++...++.+.... . .++.+.++++...+ .-...+ ..+. ..+ .+.
T Consensus 74 ~~~l~~~~~~i~~nGa~i~~~~~~~~~~~---~---~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~ 146 (332)
T 1y8a_A 74 GYTLKLLTPFLAAAGVKNRDVERIAELSA---K---FVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELH 146 (332)
T ss_dssp TTHHHHHHHHHHHTTCCHHHHHHHHHHHC---C---BCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEE
T ss_pred hhhcCCcCeEEEcCCcEEEECCeEeeccC---C---CHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhc
Confidence 4443 3578899998763211111100 1 13445555555543 111111 1110 000 000
Q ss_pred eecCChh-------hhH-------HHH-----HHHHHHHhcCCCCCCCeEEEEc--CcEEE--EEeCCCCHHHHHHHHHH
Q 003029 722 YKYADVE-------FGR-------IQA-----RDMLQHLWTGPISNASVEVVQG--SKSVE--VRAVGVTKGAAIDRILA 778 (856)
Q Consensus 722 y~~~d~e-------~~~-------~qa-----~el~~~L~~~~~~~~~v~v~~g--~~~vE--V~p~gvnKG~av~~ll~ 778 (856)
....+.+ ... ... +++ +.+ .+ + +... ..++| +.+++++||.|++.+
T Consensus 147 ~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~l-~~~-~~------~-~~~s~~~~~~e~ii~~~g~~K~~al~gi-- 215 (332)
T 1y8a_A 147 GTEVDFDSIAVPEGLREELLSIIDVIASLSGEELF-RKL-DE------L-FSRSEVRKIVESVKAVGAGEKAKIMRGY-- 215 (332)
T ss_dssp EEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHH-HHH-HH------H-HHSHHHHHHHHTCBCCCHHHHHHHHHHH--
T ss_pred ccccchhhhccccccceeEEecCHHHHhhhhHHHH-HHH-HH------H-HhhcCCCceeeEEecCCCCCHHHHHhcc--
Confidence 0000000 000 000 111 222 10 1 2212 12344 889999999999832
Q ss_pred HhCcCCcCCCCcce----EEEEecCCccccccccccccc-CcceEEeCCC------Cc-cccCC--HHHHHHHHHHHHHH
Q 003029 779 EIVHSKKMKTAIDY----VLCIGHFLGKNCNLPLQFLMQ-TISTVRLDSS------FL-HYLRM--KMCMRFLSQNYLMM 844 (856)
Q Consensus 779 ~l~~~~~~~~~~d~----vla~GD~~~nDe~M~f~~~~~-~~~~v~V~~~------~~-~~l~~--~~~~~~~l~~~~~~ 844 (856)
+++. |++||| +.||++| |+.+.. .+++|.| +. .+ |-+.+ ...|.++|+.++..
T Consensus 216 ----------~~~~~~~~via~GD-s~NDi~m-l~~A~~~~g~~vam-na~~~lk~~Ad~v~~~~~~dGV~~~l~~~~~~ 282 (332)
T 1y8a_A 216 ----------CESKGIDFPVVVGD-SISDYKM-FEAARGLGGVAIAF-NGNEYALKHADVVIISPTAMSEAKVIELFMER 282 (332)
T ss_dssp ----------HHHHTCSSCEEEEC-SGGGHHH-HHHHHHTTCEEEEE-SCCHHHHTTCSEEEECSSTHHHHHHHHHHHHH
T ss_pred ----------ChhhcCceEEEEeC-cHhHHHH-HHHHhhcCCeEEEe-cCCHHHHhhCcEEecCCCCCHHHHHHHHHHHc
Confidence 2456 999999 9999999 998721 2456777 53 23 66655 66788999988754
Q ss_pred HH
Q 003029 845 AR 846 (856)
Q Consensus 845 ~~ 846 (856)
-|
T Consensus 283 ~~ 284 (332)
T 1y8a_A 283 KE 284 (332)
T ss_dssp GG
T ss_pred CC
Confidence 44
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=98.77 E-value=4.3e-07 Score=101.81 Aligned_cols=244 Identities=10% Similarity=0.061 Sum_probs=142.9
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhh--cCCEEEEeCHHHHHHH
Q 003029 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHF 302 (856)
Q Consensus 225 i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll--~aDlIgf~t~~~~~~F 302 (856)
+.+..+ +|+|.+|+.-...++ .+.....++|+++ ++.+..+.+ + +..+++.+-+. .+|++...+....++|
T Consensus 89 ~l~~~k-PD~Vlv~gd~~~~~a-alaA~~~~IPv~h-~eaglrs~~--~--~~pee~nR~~~~~~a~~~~~~te~~~~~l 161 (385)
T 4hwg_A 89 VLEKEK-PDAVLFYGDTNSCLS-AIAAKRRKIPIFH-MEAGNRCFD--Q--RVPEEINRKIIDHISDVNITLTEHARRYL 161 (385)
T ss_dssp HHHHHC-CSEEEEESCSGGGGG-HHHHHHTTCCEEE-ESCCCCCSC--T--TSTHHHHHHHHHHHCSEEEESSHHHHHHH
T ss_pred HHHhcC-CcEEEEECCchHHHH-HHHHHHhCCCEEE-EeCCCcccc--c--cCcHHHHHHHHHhhhceeecCCHHHHHHH
Confidence 334445 499999985444444 3444445788754 343332211 1 22234444432 4788877888777777
Q ss_pred HHHHHHHhCcccCCCceeeCCeeEEEEEeec-ccChhhhhhhhcCCchHHHHHHHHHHhc---CCceEEEeeccc---cc
Q 003029 303 VSACTRILGFEGTPEGVEDQGRLTRVAAFPI-GIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLD---MI 375 (856)
Q Consensus 303 l~~~~~~lg~~~~~~~v~~~g~~~~v~viP~-GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~iIl~V~Rld---~~ 375 (856)
.+ .|.. ..+|.++++ ++|.-.+.... .....++++++ ++.+++..+|.. ..
T Consensus 162 ~~-----~G~~-----------~~~I~vtGnp~~D~~~~~~~~------~~~~~~~~~lgl~~~~~iLvt~hr~e~~~~~ 219 (385)
T 4hwg_A 162 IA-----EGLP-----------AELTFKSGSHMPEVLDRFMPK------ILKSDILDKLSLTPKQYFLISSHREENVDVK 219 (385)
T ss_dssp HH-----TTCC-----------GGGEEECCCSHHHHHHHHHHH------HHHCCHHHHTTCCTTSEEEEEECCC-----C
T ss_pred HH-----cCCC-----------cCcEEEECCchHHHHHHhhhh------cchhHHHHHcCCCcCCEEEEEeCCchhcCcH
Confidence 54 2332 234555554 56643332100 01123455553 344566677854 44
Q ss_pred CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHh-hcccCCCCcccEEEeCCCCCHHHHH
Q 003029 376 KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI-NGRFGTLTAVPIHHLDRSLDFPALC 454 (856)
Q Consensus 376 KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~I-N~~~g~~~~~pV~~~~g~v~~~el~ 454 (856)
|++..+++|+..+.+++ ++ .+|... .|. +++.++ +. +. .+ ....|+ +.+.++..++.
T Consensus 220 ~~l~~ll~al~~l~~~~-~~----~vv~p~------~p~---~~~~l~----~~~~~-~~--~~~~v~-l~~~lg~~~~~ 277 (385)
T 4hwg_A 220 NNLKELLNSLQMLIKEY-NF----LIIFST------HPR---TKKRLE----DLEGF-KE--LGDKIR-FLPAFSFTDYV 277 (385)
T ss_dssp HHHHHHHHHHHHHHHHH-CC----EEEEEE------CHH---HHHHHH----TSGGG-GG--TGGGEE-ECCCCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcC-Ce----EEEEEC------ChH---HHHHHH----HHHHH-hc--CCCCEE-EEcCCCHHHHH
Confidence 78999999999987765 43 233322 132 233332 22 10 00 112465 47888999999
Q ss_pred HHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC-chhhc-cCCeEEECCCCHHHHHHHHHHHHcCCH
Q 003029 455 ALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG-AAQSL-GAGAILVNPWNITEVANAIARALNMSP 529 (856)
Q Consensus 455 aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG-~~~~l-g~~g~lVnP~d~~~lA~ai~~aL~~~~ 529 (856)
.+|+.||+++..| |.+..||++++ .|+|+....+ -.+.+ ..++++|.+ |.+++++++.++|+++.
T Consensus 278 ~l~~~adlvvt~S-----Ggv~~EA~alG----~Pvv~~~~~ter~e~v~~G~~~lv~~-d~~~i~~ai~~ll~d~~ 344 (385)
T 4hwg_A 278 KLQMNAFCILSDS-----GTITEEASILN----LPALNIREAHERPEGMDAGTLIMSGF-KAERVLQAVKTITEEHD 344 (385)
T ss_dssp HHHHHCSEEEECC-----TTHHHHHHHTT----CCEEECSSSCSCTHHHHHTCCEECCS-SHHHHHHHHHHHHTTCB
T ss_pred HHHHhCcEEEECC-----ccHHHHHHHcC----CCEEEcCCCccchhhhhcCceEEcCC-CHHHHHHHHHHHHhChH
Confidence 9999999999887 45679999994 7777765433 33444 225677754 99999999999998753
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.76 E-value=2.7e-08 Score=96.91 Aligned_cols=142 Identities=14% Similarity=0.050 Sum_probs=99.8
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeC
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAEN 668 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaen 668 (856)
...|+|+||+||||++..... .........+++.+.++|++|.+ .|+.++|+||++...+...+..+++.-.
T Consensus 7 ~~~k~v~~DlDGTL~~~~~~~----~~~~~~~~~~~~~~~~~l~~l~~-~g~~~~i~T~~~~~~~~~~l~~~gl~~~--- 78 (162)
T 2p9j_A 7 KKLKLLIMDIDGVLTDGKLYY----TEHGETIKVFNVLDGIGIKLLQK-MGITLAVISGRDSAPLITRLKELGVEEI--- 78 (162)
T ss_dssp HHCCEEEECCTTTTSCSEEEE----ETTEEEEEEEEHHHHHHHHHHHT-TTCEEEEEESCCCHHHHHHHHHTTCCEE---
T ss_pred cceeEEEEecCcceECCceee----cCCCceeeeecccHHHHHHHHHH-CCCEEEEEeCCCcHHHHHHHHHcCCHhh---
Confidence 347999999999999752100 00001123456788999999986 6999999999999888888877653210
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCC
Q 003029 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 748 (856)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~ 748 (856)
+ +
T Consensus 79 --------------~----~------------------------------------------------------------ 80 (162)
T 2p9j_A 79 --------------Y----T------------------------------------------------------------ 80 (162)
T ss_dssp --------------E----E------------------------------------------------------------
T ss_pred --------------c----c------------------------------------------------------------
Confidence 0 0
Q ss_pred CCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-----
Q 003029 749 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS----- 823 (856)
Q Consensus 749 ~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~----- 823 (856)
.+..|..++++++++++ ++++.+++||| +.+|..| .+.+ ++.+.+.+.
T Consensus 81 ----------------~~kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~-a~~a---g~~~~~~~~~~~~~ 133 (162)
T 2p9j_A 81 ----------------GSYKKLEIYEKIKEKYS------LKDEEIGFIGD-DVVDIEV-MKKV---GFPVAVRNAVEEVR 133 (162)
T ss_dssp ----------------CC--CHHHHHHHHHHTT------CCGGGEEEEEC-SGGGHHH-HHHS---SEEEECTTSCHHHH
T ss_pred ----------------CCCCCHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHH-HHHC---CCeEEecCccHHHH
Confidence 03468899999999998 56899999999 9999999 6544 566666543
Q ss_pred --CccccCCHHH---HHHHHHHHHH
Q 003029 824 --FLHYLRMKMC---MRFLSQNYLM 843 (856)
Q Consensus 824 --~~~~l~~~~~---~~~~l~~~~~ 843 (856)
+.|.+.+..+ ++.+++.++.
T Consensus 134 ~~a~~v~~~~~~~g~~~~~~~~~~~ 158 (162)
T 2p9j_A 134 KVAVYITQRNGGEGALREVAELIHF 158 (162)
T ss_dssp HHCSEECSSCSSSSHHHHHHHHHHH
T ss_pred hhCCEEecCCCCCcHHHHHHHHHHH
Confidence 2276777655 6677777764
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=1.1e-07 Score=95.46 Aligned_cols=147 Identities=13% Similarity=0.112 Sum_probs=100.1
Q ss_pred HHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEE
Q 003029 586 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLA 665 (856)
Q Consensus 586 y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgli 665 (856)
++....|+|+||+||||++....- ....+...........+|++|.+ .|+.++|+||++...++..+..+++.-.
T Consensus 21 ~~~~~ik~vifD~DGTL~~~~~~~----~~~~~~~~~~~~~d~~~l~~L~~-~g~~v~ivT~~~~~~~~~~l~~lgl~~~ 95 (188)
T 2r8e_A 21 AKAENIRLLILDVDGVLSDGLIYM----GNNGEELKAFNVRDGYGIRCALT-SDIEVAIITGRKAKLVEDRCATLGITHL 95 (188)
T ss_dssp HHHHTCSEEEECCCCCCBCSEEEE----ETTSCEEEEEEHHHHHHHHHHHT-TTCEEEEECSSCCHHHHHHHHHHTCCEE
T ss_pred HHHhcCCEEEEeCCCCcCCCCEEe----cCCCcEEEEeecccHHHHHHHHH-CCCeEEEEeCCChHHHHHHHHHcCCcee
Confidence 345678999999999999742100 00000011122333457888885 6999999999999888877776653211
Q ss_pred eeCceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCC
Q 003029 666 AENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGP 745 (856)
Q Consensus 666 aenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~ 745 (856)
+
T Consensus 96 -----------------~-------------------------------------------------------------- 96 (188)
T 2r8e_A 96 -----------------Y-------------------------------------------------------------- 96 (188)
T ss_dssp -----------------E--------------------------------------------------------------
T ss_pred -----------------e--------------------------------------------------------------
Confidence 0
Q ss_pred CCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC-
Q 003029 746 ISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF- 824 (856)
Q Consensus 746 ~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~- 824 (856)
+.+..|+.++++++++++ ++++++++||| +.||++| ++.+ ++++.+++..
T Consensus 97 ------------------~~~kpk~~~~~~~~~~~g------~~~~~~~~iGD-~~~Di~~-a~~a---g~~~~~~~~~~ 147 (188)
T 2r8e_A 97 ------------------QGQSNKLIAFSDLLEKLA------IAPENVAYVGD-DLIDWPV-MEKV---GLSVAVADAHP 147 (188)
T ss_dssp ------------------CSCSCSHHHHHHHHHHHT------CCGGGEEEEES-SGGGHHH-HTTS---SEEEECTTSCT
T ss_pred ------------------cCCCCCHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHH-HHHC---CCEEEecCcCH
Confidence 013578999999999998 56889999999 9999999 6655 6667775431
Q ss_pred -----c-cccCCH---HHHHHHHHHHHHHH
Q 003029 825 -----L-HYLRMK---MCMRFLSQNYLMMA 845 (856)
Q Consensus 825 -----~-~~l~~~---~~~~~~l~~~~~~~ 845 (856)
+ |.+.++ ..++++++.++..-
T Consensus 148 ~~~~~ad~v~~~~~~~g~~~~~l~~ll~~~ 177 (188)
T 2r8e_A 148 LLIPRADYVTRIAGGRGAVREVCDLLLLAQ 177 (188)
T ss_dssp TTGGGSSEECSSCTTTTHHHHHHHHHHHHT
T ss_pred HHHhcCCEEEeCCCCCcHHHHHHHHHHHhc
Confidence 2 677765 45667777777653
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.63 E-value=7.2e-08 Score=95.84 Aligned_cols=53 Identities=17% Similarity=0.080 Sum_probs=43.7
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC-------ccccCC
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF-------LHYLRM 830 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~-------~~~l~~ 830 (856)
.+|+.++++++++++ ++++.+++||| +.||.+| ++.+ +++|.+++.. .|.+.+
T Consensus 85 ~~k~~~l~~~~~~~~------~~~~~~~~vGD-~~nD~~~-~~~a---g~~v~~~~~~~~~~~~ad~v~~~ 144 (176)
T 3mmz_A 85 DRKDLALKQWCEEQG------IAPERVLYVGN-DVNDLPC-FALV---GWPVAVASAHDVVRGAARAVTTV 144 (176)
T ss_dssp SCHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHH-HHHS---SEEEECTTCCHHHHHHSSEECSS
T ss_pred CChHHHHHHHHHHcC------CCHHHEEEEcC-CHHHHHH-HHHC---CCeEECCChhHHHHHhCCEEecC
Confidence 679999999999999 67899999999 9999999 7765 5778886642 266666
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=1.8e-07 Score=91.21 Aligned_cols=139 Identities=14% Similarity=0.119 Sum_probs=94.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCce-EEeeC
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLW-LAAEN 668 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lg-liaen 668 (856)
+.|+|+||+||||++....-..... ...........+|+.|.+ .|..++|+||++...++..+..+++. +...
T Consensus 3 ~ik~vifD~DGTL~~~~~~~~~~~~----~~~~~~~~~~~~l~~l~~-~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~- 76 (164)
T 3e8m_A 3 EIKLILTDIDGVWTDGGMFYDQTGN----EWKKFNTSDSAGIFWAHN-KGIPVGILTGEKTEIVRRRAEKLKVDYLFQG- 76 (164)
T ss_dssp CCCEEEECSTTTTSSSEEEECSSSC----EEEEEEGGGHHHHHHHHH-TTCCEEEECSSCCHHHHHHHHHTTCSEEECS-
T ss_pred cceEEEEcCCCceEcCcEEEcCCCc----EEEEecCChHHHHHHHHH-CCCEEEEEeCCChHHHHHHHHHcCCCEeecc-
Confidence 5789999999999985210000000 011122222336888876 69999999999988888888776531 1100
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCC
Q 003029 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 748 (856)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~ 748 (856)
T Consensus 77 -------------------------------------------------------------------------------- 76 (164)
T 3e8m_A 77 -------------------------------------------------------------------------------- 76 (164)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC----
Q 003029 749 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF---- 824 (856)
Q Consensus 749 ~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~---- 824 (856)
.-.|..+++.++++++ ++++++++||| +.||.+| .+.+ ++++.+++..
T Consensus 77 -----------------~kpk~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~-~~~a---g~~~~~~~~~~~~~ 128 (164)
T 3e8m_A 77 -----------------VVDKLSAAEELCNELG------INLEQVAYIGD-DLNDAKL-LKRV---GIAGVPASAPFYIR 128 (164)
T ss_dssp -----------------CSCHHHHHHHHHHHHT------CCGGGEEEECC-SGGGHHH-HTTS---SEEECCTTSCHHHH
T ss_pred -----------------cCChHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHH-HHHC---CCeEEcCChHHHHH
Confidence 1579999999999998 67899999999 9999999 6554 6677776542
Q ss_pred --c-cccCCHH---HHHHHHHHHH
Q 003029 825 --L-HYLRMKM---CMRFLSQNYL 842 (856)
Q Consensus 825 --~-~~l~~~~---~~~~~l~~~~ 842 (856)
+ |.+.+.. .++++++.++
T Consensus 129 ~~ad~v~~~~~~~g~~~e~~~~ll 152 (164)
T 3e8m_A 129 RLSTIFLEKRGGEGVFREFVEKVL 152 (164)
T ss_dssp TTCSSCCCCCTTTTHHHHHHHHHT
T ss_pred HhCcEEeccCCCCcHHHHHHHHHH
Confidence 2 6666643 3777777765
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=98.58 E-value=5.6e-07 Score=93.72 Aligned_cols=67 Identities=10% Similarity=-0.090 Sum_probs=50.8
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCcceEEeCCC-------------CccccC
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTISTVRLDSS-------------FLHYLR 829 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~v~V~~~-------------~~~~l~ 829 (856)
..+-.|+.+++.+++++| ++++++++||| +. ||+.| .+.++- .+|.|... +.|.+.
T Consensus 176 ~~~Kp~~~~~~~~~~~lg------i~~~~~~~iGD-~~~~Di~~-a~~aG~--~~i~v~~g~~~~~~~~~~~~~~~~~~~ 245 (259)
T 2ho4_A 176 VVGKPEKTFFLEALRDAD------CAPEEAVMIGD-DCRDDVDG-AQNIGM--LGILVKTGKYKAADEEKINPPPYLTCE 245 (259)
T ss_dssp ECSTTSHHHHHHHGGGGT------CCGGGEEEEES-CTTTTHHH-HHHTTC--EEEEESSTTCCTTGGGGSSSCCSEEES
T ss_pred EecCCCHHHHHHHHHHcC------CChHHEEEECC-CcHHHHHH-HHHCCC--cEEEECCCCCCcccccccCCCCCEEEC
Confidence 446678999999999999 67899999999 98 99999 777643 34555321 126788
Q ss_pred CHHHHHHHHHH
Q 003029 830 MKMCMRFLSQN 840 (856)
Q Consensus 830 ~~~~~~~~l~~ 840 (856)
+..++..+|.+
T Consensus 246 ~l~~l~~~l~~ 256 (259)
T 2ho4_A 246 SFPHAVDHILQ 256 (259)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 88888777654
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.57 E-value=7.9e-08 Score=92.17 Aligned_cols=69 Identities=16% Similarity=0.112 Sum_probs=52.9
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC---HhhHHHHhcccCc--eE
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD---RNVLDKNFQEYNL--WL 664 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~---~~~l~~~~~~l~l--gl 664 (856)
+.|+||+|+||||++..... ...+.+.++++|++|.+ .|+.|+|+|||+ ...+..|+...++ .+
T Consensus 2 ~~k~i~~DlDGTL~~~~~~~----------i~~~~~~~~~al~~l~~-~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~ 70 (142)
T 2obb_A 2 NAMTIAVDFDGTIVEHRYPR----------IGEEIPFAVETLKLLQQ-EKHRLILWSVREGELLDEAIEWCRARGLEFYA 70 (142)
T ss_dssp CCCEEEECCBTTTBCSCTTS----------CCCBCTTHHHHHHHHHH-TTCEEEECCSCCHHHHHHHHHHHHTTTCCCSE
T ss_pred CCeEEEEECcCCCCCCCCcc----------ccccCHHHHHHHHHHHH-CCCEEEEEeCCCcccHHHHHHHHHHcCCCeEE
Confidence 47899999999999863110 12355789999999986 799999999998 5667778877653 56
Q ss_pred EeeCc
Q 003029 665 AAENG 669 (856)
Q Consensus 665 iaenG 669 (856)
++.|+
T Consensus 71 I~~n~ 75 (142)
T 2obb_A 71 ANKDY 75 (142)
T ss_dssp ESSSS
T ss_pred EEcCC
Confidence 77774
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=1.5e-07 Score=101.62 Aligned_cols=192 Identities=14% Similarity=0.089 Sum_probs=107.4
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEc---CCCHhhHHHHhcccCc----
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYNL---- 662 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~l~l---- 662 (856)
++|+|+||+||||++.. .+.+.+.++|++|.+ .|+.|+++| ||+...+...+..+++
T Consensus 20 ~~k~i~~D~DGTL~~~~---------------~~~~~~~~~l~~l~~-~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~~~~ 83 (306)
T 2oyc_A 20 RAQGVLFDCDGVLWNGE---------------RAVPGAPELLERLAR-AGKAALFVSNNSRRARPELALRFARLGFGGLR 83 (306)
T ss_dssp HCSEEEECSBTTTEETT---------------EECTTHHHHHHHHHH-TTCEEEEEECCCSSCHHHHHHHHHHTTCCSCC
T ss_pred hCCEEEECCCCcEecCC---------------ccCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHhcCCCcCC
Confidence 47899999999999752 355789999999986 799999999 6888888888777643
Q ss_pred --eEEeeCceEEEe--c--------CCeeeecccccCChHHHHHHHHHHHHHHhc-CCC---cEEeeecceEEEEeecCC
Q 003029 663 --WLAAENGMFLRC--T--------TGKWMTTMPEHLNMEWVDSLKHVFEYFTER-TPR---SHFEQRETSLVWNYKYAD 726 (856)
Q Consensus 663 --gliaenG~~i~~--~--------~~~w~~~~~~~~~~~w~~~v~~i~~~~~~r-t~g---s~ie~k~~si~~~y~~~d 726 (856)
.+++.||+.+.. . +.. .... . ...+...++...-. ... .+.........+...+.
T Consensus 84 ~~~i~~~~~~~~~~l~~~~~~~~~~~~~-v~~~----g---~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~- 154 (306)
T 2oyc_A 84 AEQLFSSALCAARLLRQRLPGPPDAPGA-VFVL----G---GEGLRAELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDE- 154 (306)
T ss_dssp GGGEEEHHHHHHHHHHHHCCSCSSSCCE-EEEE----S---CHHHHHHHHHTTCEETTSCCCC---CCCEEEEEECCCT-
T ss_pred hhhEEcHHHHHHHHHHhhCCccccCCCe-EEEE----C---CHHHHHHHHHCCCEeecccccccccCCCCCEEEEeCCC-
Confidence 366666554321 0 110 0000 0 01222223221100 000 01111111222221111
Q ss_pred hhhhHHHHHHHHHHHhcCCCCCCCeEEEEcC-c------------------------EEEEEeCCCCHHHHHHHHHHHhC
Q 003029 727 VEFGRIQARDMLQHLWTGPISNASVEVVQGS-K------------------------SVEVRAVGVTKGAAIDRILAEIV 781 (856)
Q Consensus 727 ~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~-~------------------------~vEV~p~gvnKG~av~~ll~~l~ 781 (856)
.+......++++.| ... .. +-++.+. . ..|....+..|+.+++.+++++|
T Consensus 155 -~~~~~~~~~~l~~l-~~~--g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lg 229 (306)
T 2oyc_A 155 -HFSFAKLREACAHL-RDP--EC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFS 229 (306)
T ss_dssp -TCCHHHHHHHHHHH-TST--TS-EEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSC
T ss_pred -CCCHHHHHHHHHHH-HcC--CC-EEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcC
Confidence 11112234555555 321 11 1122111 1 11334567889999999999999
Q ss_pred cCCcCCCCcceEEEEecCCc-ccccccccccccCcceEEeC
Q 003029 782 HSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTISTVRLD 821 (856)
Q Consensus 782 ~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~v~V~ 821 (856)
++++++++||| +. ||+.| .+.++- -+|.|.
T Consensus 230 ------i~~~e~l~vGD-~~~~Di~~-a~~aG~--~~i~v~ 260 (306)
T 2oyc_A 230 ------IDPARTLMVGD-RLETDILF-GHRCGM--TTVLTL 260 (306)
T ss_dssp ------CCGGGEEEEES-CTTTHHHH-HHHHTC--EEEEES
T ss_pred ------CChHHEEEECC-CchHHHHH-HHHCCC--eEEEEC
Confidence 67899999999 95 99999 776642 345553
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.52 E-value=1.9e-07 Score=94.21 Aligned_cols=46 Identities=20% Similarity=0.107 Sum_probs=39.2
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
-+|+.+++.++++++ ++++.+++||| +.||++| ++.+ ++++.+++.
T Consensus 93 kpk~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~-~~~a---g~~~~~~~~ 138 (191)
T 3n1u_A 93 VDKRSAYQHLKKTLG------LNDDEFAYIGD-DLPDLPL-IQQV---GLGVAVSNA 138 (191)
T ss_dssp SSCHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHH-HHHS---SEEEECTTC
T ss_pred CChHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHH-HHHC---CCEEEeCCc
Confidence 478999999999998 67899999999 9999999 6655 677778764
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.49 E-value=6.9e-07 Score=88.32 Aligned_cols=66 Identities=12% Similarity=0.084 Sum_probs=50.7
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHH---HHHHH
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKM---CMRFL 837 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~---~~~~~ 837 (856)
+|+.+++.++++++ ++++++++||| +.||.+| ++.+ ++++.+++.. + |-+.+.. .++++
T Consensus 83 ~K~~~l~~~~~~~g------i~~~~~~~vGD-~~nDi~~-~~~a---g~~~a~~na~~~~k~~Ad~v~~~~~~~G~~~~~ 151 (168)
T 3ewi_A 83 DKLATVDEWRKEMG------LCWKEVAYLGN-EVSDEEC-LKRV---GLSAVPADACSGAQKAVGYICKCSGGRGAIREF 151 (168)
T ss_dssp CHHHHHHHHHHHTT------CCGGGEEEECC-SGGGHHH-HHHS---SEEEECTTCCHHHHTTCSEECSSCTTTTHHHHH
T ss_pred ChHHHHHHHHHHcC------cChHHEEEEeC-CHhHHHH-HHHC---CCEEEeCChhHHHHHhCCEEeCCCCCccHHHHH
Confidence 59999999999998 67899999999 9999999 7655 6788887642 2 5555432 36667
Q ss_pred HHHHHHH
Q 003029 838 SQNYLMM 844 (856)
Q Consensus 838 l~~~~~~ 844 (856)
.+.++..
T Consensus 152 ~~~il~~ 158 (168)
T 3ewi_A 152 AEHIFLL 158 (168)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7766643
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.48 E-value=1.5e-06 Score=87.91 Aligned_cols=143 Identities=15% Similarity=0.158 Sum_probs=95.2
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeC
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAEN 668 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaen 668 (856)
.+.|+|+||+||||++....- ....+............|+.|.+ .|..++|+||++...++..+..+++.-
T Consensus 23 ~~ik~vifD~DGtL~d~~~~~----~~~~~~~~~~~~~d~~~l~~L~~-~G~~~~ivT~~~~~~~~~~l~~lgi~~---- 93 (195)
T 3n07_A 23 KQIKLLICDVDGVFSDGLIYM----GNQGEELKTFHTRDGYGVKALMN-AGIEIAIITGRRSQIVENRMKALGISL---- 93 (195)
T ss_dssp HTCCEEEECSTTTTSCSCCEE----CTTSCEECCCCTTHHHHHHHHHH-TTCEEEEECSSCCHHHHHHHHHTTCCE----
T ss_pred hCCCEEEEcCCCCcCCCcEEE----ccCchhhheeecccHHHHHHHHH-CCCEEEEEECcCHHHHHHHHHHcCCcE----
Confidence 468999999999999842100 00000112233334456888886 699999999998777766666554210
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCC
Q 003029 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 748 (856)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~ 748 (856)
. |.
T Consensus 94 -------------~---------------------------------------~~------------------------- 96 (195)
T 3n07_A 94 -------------I---------------------------------------YQ------------------------- 96 (195)
T ss_dssp -------------E---------------------------------------EC-------------------------
T ss_pred -------------E---------------------------------------ee-------------------------
Confidence 0 00
Q ss_pred CCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC----
Q 003029 749 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF---- 824 (856)
Q Consensus 749 ~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~---- 824 (856)
+ .-+|+.+++.++++++ ++++++++||| +.||++| ++.+ +++|.+++..
T Consensus 97 -------~---------~k~k~~~~~~~~~~~~------~~~~~~~~vGD-~~nDi~~-~~~a---g~~va~~na~~~~~ 149 (195)
T 3n07_A 97 -------G---------QDDKVQAYYDICQKLA------IAPEQTGYIGD-DLIDWPV-MEKV---ALRVCVADGHPLLA 149 (195)
T ss_dssp -------S---------CSSHHHHHHHHHHHHC------CCGGGEEEEES-SGGGHHH-HTTS---SEEEECTTSCHHHH
T ss_pred -------C---------CCCcHHHHHHHHHHhC------CCHHHEEEEcC-CHHHHHH-HHHC---CCEEEECChHHHHH
Confidence 0 0379999999999999 67899999999 9999999 7765 6788887652
Q ss_pred --c-cccCCHH---HHHHHHHHHHHH
Q 003029 825 --L-HYLRMKM---CMRFLSQNYLMM 844 (856)
Q Consensus 825 --~-~~l~~~~---~~~~~l~~~~~~ 844 (856)
+ |-+.+.. .++++.+.++..
T Consensus 150 ~~ad~v~~~~~~~G~~~~~~~~il~~ 175 (195)
T 3n07_A 150 QRANYVTHIKGGHGAVREVCDLILQA 175 (195)
T ss_dssp HHCSEECSSCTTTTHHHHHHHHHHHH
T ss_pred HhCCEEEcCCCCCCHHHHHHHHHHHh
Confidence 2 5555432 356666666554
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=3.5e-06 Score=94.08 Aligned_cols=158 Identities=14% Similarity=0.048 Sum_probs=103.9
Q ss_pred CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003029 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (856)
...+++++|++. .|+...+..+++.+.+ .+ +.++.++++.. ... ++++ + ...|
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l~~-~~-----~~~~~~~g~~~-~~~-------~l~~----~--------~~~v 294 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGLAG-LD-----ADVLVASGPSL-DVS-------GLGE----V--------PANV 294 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHHHT-SS-----SEEEEECCSSC-CCT-------TCCC----C--------CTTE
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHHHc-CC-----CEEEEEECCCC-Chh-------hhcc----C--------CCcE
Confidence 345778899996 6676666666665533 22 23444443221 000 1110 0 0135
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC----chhhc--cCCeEEECCC--C
Q 003029 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW--N 513 (856)
Q Consensus 442 ~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG----~~~~l--g~~g~lVnP~--d 513 (856)
.+ .++++ +..+|+.||+||.+|- ..+++|||+|+ .|+|+....+ .++.+ +..|++++|. |
T Consensus 295 ~~-~~~~~---~~~~l~~ad~~v~~~g----~~t~~Ea~a~G----~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~ 362 (412)
T 3otg_A 295 RL-ESWVP---QAALLPHVDLVVHHGG----SGTTLGALGAG----VPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNIS 362 (412)
T ss_dssp EE-ESCCC---HHHHGGGCSEEEESCC----HHHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCC
T ss_pred EE-eCCCC---HHHHHhcCcEEEECCc----hHHHHHHHHhC----CCEEecCCchhHHHHHHHHHHcCCEEecCcccCC
Confidence 54 67774 7788999999998762 36899999994 8888865554 55555 3579999887 9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 003029 514 ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (856)
Q Consensus 514 ~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l 559 (856)
+++++++|.++|+++ +.+.++.+..++....+++..-++.+.+-+
T Consensus 363 ~~~l~~ai~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 407 (412)
T 3otg_A 363 PDSVSGAAKRLLAEE-SYRAGARAVAAEIAAMPGPDEVVRLLPGFA 407 (412)
T ss_dssp HHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHSCCHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHhCH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHh
Confidence 999999999999864 466666666677777777777666554443
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=98.42 E-value=8.8e-07 Score=88.97 Aligned_cols=46 Identities=15% Similarity=0.181 Sum_probs=39.5
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
.+|+.+++.+++++| ++++.+++||| +.||++| ++.+ ++++.+++.
T Consensus 93 ~~K~~~~~~~~~~~g------~~~~~~~~vGD-~~nDi~~-~~~a---g~~~~~~~~ 138 (189)
T 3mn1_A 93 EDKLVVLDKLLAELQ------LGYEQVAYLGD-DLPDLPV-IRRV---GLGMAVANA 138 (189)
T ss_dssp SCHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHH-HHHS---SEEEECTTS
T ss_pred CChHHHHHHHHHHcC------CChhHEEEECC-CHHHHHH-HHHC---CCeEEeCCc
Confidence 689999999999999 67899999999 9999999 6655 677888664
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=98.40 E-value=2e-05 Score=94.31 Aligned_cols=151 Identities=11% Similarity=0.080 Sum_probs=105.5
Q ss_pred CCceEEEeecccccCChHHH-HHHHHHHH--HhCcCccC-ceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003029 362 GRKVMLGVDRLDMIKGIPQK-LLAFEKFL--EENSDWRG-KVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~~-L~Af~~~l--~~~P~~~~-~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (856)
+..+++.|.|++..||.... +..+++++ ..+|+..- .+++|..|.+..++ ...+.+-+.+.+++..+|..=...+
T Consensus 549 d~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIkli~~va~~in~Dp~v~~ 627 (824)
T 2gj4_A 549 NSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGY-HMAKMIIKLITAIGDVVNHDPVVGD 627 (824)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHTTCTTTGG
T ss_pred CcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhH-HHHHHHHHHHHHHHHHhccCcccCC
Confidence 56889999999999999998 88888875 35664311 35677666544333 3334566678888888875311112
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHhhcCCCCceEEEeCCCCchhh----cc-CCeEEEC
Q 003029 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS----LG-AGAILVN 510 (856)
Q Consensus 438 ~~pV~~~~g~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~----lg-~~g~lVn 510 (856)
.-.|+|+. ..+-.--..+|.+||+++.||. .|.-|+.-+=||.- |.|-+|..-|+.-+ +| .+|+++.
T Consensus 628 ~lKVvFl~-nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlN-----GaLtigtlDGanvEi~e~vG~~Ngf~FG 701 (824)
T 2gj4_A 628 RLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN-----GALTIGTMDGANVEMAEEAGEENFFIFG 701 (824)
T ss_dssp GEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CceEEEEecCccchhhhccCCCCEEEeC
Confidence 22477755 4466777788999999999999 99999999999986 56666666676533 34 4789997
Q ss_pred CCCHHHHHHHH
Q 003029 511 PWNITEVANAI 521 (856)
Q Consensus 511 P~d~~~lA~ai 521 (856)
.. .+++ .++
T Consensus 702 ~~-~~ev-~~l 710 (824)
T 2gj4_A 702 MR-VEDV-DRL 710 (824)
T ss_dssp CC-HHHH-HHH
T ss_pred Cc-HHHH-HHH
Confidence 65 6666 444
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=4e-07 Score=91.10 Aligned_cols=46 Identities=9% Similarity=0.122 Sum_probs=39.3
Q ss_pred CCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeC
Q 003029 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLD 821 (856)
Q Consensus 765 ~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~ 821 (856)
.+.+|+.++..+++++| ++++++++||| +.||++| ++.+ +++|.++
T Consensus 140 ~~~~K~~~l~~~~~~lg------i~~~~~~~iGD-~~~Di~~-~~~a---g~~~~~~ 185 (211)
T 1l7m_A 140 KENAKGEILEKIAKIEG------INLEDTVAVGD-GANDISM-FKKA---GLKIAFC 185 (211)
T ss_dssp STTHHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHH-HHHC---SEEEEES
T ss_pred CCccHHHHHHHHHHHcC------CCHHHEEEEec-ChhHHHH-HHHC---CCEEEEC
Confidence 47799999999999999 67899999999 9999999 7766 4556665
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=2e-05 Score=94.02 Aligned_cols=150 Identities=15% Similarity=0.122 Sum_probs=107.7
Q ss_pred CCceEEEeecccccCChHH-HHHHHHHHHH--hCcCcc-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003029 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFLE--ENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~-~L~Af~~~l~--~~P~~~-~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (856)
+..+++.|.|++..||... ++..+.++++ .+|+.. ..+++|..|.+..++ ...+.+-+.+..++.-||..=...+
T Consensus 525 d~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~Dp~~~~ 603 (796)
T 1l5w_A 525 QAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVADVINNDPLVGD 603 (796)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTGG
T ss_pred CcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhH-HHHHHHHHHHHHHHHHhccccccCC
Confidence 5688999999999999999 8888888765 455421 247777666544333 3334556677888887776211111
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc----c-CCeEEEC
Q 003029 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILVN 510 (856)
Q Consensus 438 ~~pV~~~~g~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l----g-~~g~lVn 510 (856)
.-.|+|+. ..+-.--..+|.+||+++.||. .|.-|+.-+=||.- |.|-+|...|+..++ | .+|+++.
T Consensus 604 ~lKVvfl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N-----GaL~iGtLDGanvEi~e~vG~~NgF~FG 677 (796)
T 1l5w_A 604 KLKVVFLP-DYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN-----GALTVGTLDGANVEIAEKVGEENIFIFG 677 (796)
T ss_dssp GEEEEECS-SCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CCeeecCcCCeeeehhhccCCCcEEEec
Confidence 22477644 4577777888999999999999 99999999999986 556668877777654 5 5899997
Q ss_pred CCCHHHHHH
Q 003029 511 PWNITEVAN 519 (856)
Q Consensus 511 P~d~~~lA~ 519 (856)
. +.+++.+
T Consensus 678 ~-~~~ev~~ 685 (796)
T 1l5w_A 678 H-TVEQVKA 685 (796)
T ss_dssp C-CHHHHHH
T ss_pred C-CHHHHHH
Confidence 7 7777763
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=98.36 E-value=1.2e-05 Score=95.91 Aligned_cols=150 Identities=13% Similarity=0.164 Sum_probs=107.1
Q ss_pred CCceEEEeecccccCChHH-HHHHHHHHHH--hCcCcc-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003029 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFLE--ENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~-~L~Af~~~l~--~~P~~~-~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (856)
+..+++.|.|++..||... ++..+.++++ .+|+.. ..+++|..|.+..++ ...+.+-+.+..++.-||..=...+
T Consensus 515 d~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~dp~~~~ 593 (796)
T 2c4m_A 515 ESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGY-VRAKAIIKLINSIADLVNNDPEVSP 593 (796)
T ss_dssp TSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTTT
T ss_pred CCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhH-HHHHHHHHHHHHHHHHhccccccCC
Confidence 5688999999999999999 8999988875 566421 246777666544333 3334556677888887776211112
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc----c-CCeEEEC
Q 003029 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILVN 510 (856)
Q Consensus 438 ~~pV~~~~g~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l----g-~~g~lVn 510 (856)
.-.|+|+. ..+-.--..+|.+||+++.||. .|.-|+.-+=||.- |.|-+|...|+..++ | .+|+++.
T Consensus 594 ~lKVvFl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N-----GaL~iGtLDGanvEi~e~vG~~NgF~FG 667 (796)
T 2c4m_A 594 LLKVVFVE-NYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMN-----GALTLGTMDGANVEIVDSVGEENAYIFG 667 (796)
T ss_dssp TEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHT-----TCEEEEESSTHHHHHHHHHCGGGSEEES
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CCeEEeccCCeEeehhhhcCCCcEEEec
Confidence 22477755 4466777788999999999999 99999999999986 555667777777654 5 5899997
Q ss_pred C--CCHHHHH
Q 003029 511 P--WNITEVA 518 (856)
Q Consensus 511 P--~d~~~lA 518 (856)
. .++.++-
T Consensus 668 ~~~~ev~~l~ 677 (796)
T 2c4m_A 668 ARVEELPALR 677 (796)
T ss_dssp CCTTTHHHHH
T ss_pred CchhhHHHHH
Confidence 6 5665544
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.35 E-value=1.3e-06 Score=87.49 Aligned_cols=73 Identities=10% Similarity=-0.098 Sum_probs=55.5
Q ss_pred CcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC---------Cccc
Q 003029 757 SKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS---------FLHY 827 (856)
Q Consensus 757 ~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~---------~~~~ 827 (856)
....++.+.+.+|+.+++.+.+.++ ++++++++||| +.||++| ++ ++-..+.|.++.. +.|.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~vGD-~~~Di~~-~~-~G~~~~~v~~~~~~~~~~~~~~ad~v 207 (219)
T 3kd3_A 137 GSFKELDNSNGACDSKLSAFDKAKG------LIDGEVIAIGD-GYTDYQL-YE-KGYATKFIAYMEHIEREKVINLSKYV 207 (219)
T ss_dssp SBEEEEECTTSTTTCHHHHHHHHGG------GCCSEEEEEES-SHHHHHH-HH-HTSCSEEEEECSSCCCHHHHHHCSEE
T ss_pred CceeccCCCCCCcccHHHHHHHHhC------CCCCCEEEEEC-CHhHHHH-Hh-CCCCcEEEeccCccccHHHHhhccee
Confidence 3456788889999999999999888 56899999999 9999999 85 4333455555432 2288
Q ss_pred cCCHHHHHHHH
Q 003029 828 LRMKMCMRFLS 838 (856)
Q Consensus 828 l~~~~~~~~~l 838 (856)
+++..++..+|
T Consensus 208 ~~~~~el~~~l 218 (219)
T 3kd3_A 208 ARNVAELASLI 218 (219)
T ss_dssp ESSHHHHHHHH
T ss_pred eCCHHHHHHhh
Confidence 88888877654
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.34 E-value=1.5e-06 Score=89.03 Aligned_cols=67 Identities=18% Similarity=0.124 Sum_probs=51.2
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHH---HHHH
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKM---CMRF 836 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~---~~~~ 836 (856)
-+|+.+++.++++++ ++++.+++||| +.||++| ++.+ ++++.+++.. + |-+.++. .+++
T Consensus 123 k~K~~~l~~~~~~lg------~~~~~~~~vGD-s~nDi~~-~~~a---g~~~a~~~~~~~~~~~Ad~v~~~~~~~G~v~e 191 (211)
T 3ij5_A 123 SDKLVAYHELLATLQ------CQPEQVAYIGD-DLIDWPV-MAQV---GLSVAVADAHPLLLPKAHYVTRIKGGRGAVRE 191 (211)
T ss_dssp SSHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHH-HTTS---SEEEECTTSCTTTGGGSSEECSSCTTTTHHHH
T ss_pred CChHHHHHHHHHHcC------cCcceEEEEcC-CHHHHHH-HHHC---CCEEEeCCccHHHHhhCCEEEeCCCCCcHHHH
Confidence 469999999999999 67899999999 9999999 7655 6777776531 2 6665552 4677
Q ss_pred HHHHHHHH
Q 003029 837 LSQNYLMM 844 (856)
Q Consensus 837 ~l~~~~~~ 844 (856)
+++.++.+
T Consensus 192 ~~~~ll~~ 199 (211)
T 3ij5_A 192 VCDLILLA 199 (211)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77766653
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.28 E-value=2.6e-06 Score=86.90 Aligned_cols=199 Identities=10% Similarity=0.040 Sum_probs=110.2
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhH-HHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeC
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDL-KQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAEN 668 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~-~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaen 668 (856)
+.|+|+||+||||++. ...+.+.. .++++++.. +...+...+|++....-..+..... ....
T Consensus 24 ~~k~i~fDlDGTL~d~--------------~~~~~~~~~~~~~~~~g~-~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~ 86 (231)
T 3kzx_A 24 QPTAVIFDWYNTLIDT--------------SINIDRTTFYQVLDQMGY-KNIDLDSIPNSTIPKYLITLLGKRW--KEAT 86 (231)
T ss_dssp CCSEEEECTBTTTEET--------------TSSCCHHHHHHHHHHTTC-CCCCCTTSCTTTHHHHHHHHHGGGH--HHHH
T ss_pred CCCEEEECCCCCCcCC--------------chhHHHHHHHHHHHHcCC-CHHHHHHHhCccHHHHHHHHhCchH--HHHH
Confidence 5799999999999986 34567788 899999875 5677777888876543222211000 0000
Q ss_pred ceEEEe-c-CCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCC
Q 003029 669 GMFLRC-T-TGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPI 746 (856)
Q Consensus 669 G~~i~~-~-~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~ 746 (856)
..+... . ....... ...+.+.++++...++ |. .+.+- .+.... .....++.+ . +.
T Consensus 87 ~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~l~~~--g~-------~~~i~-T~~~~~----~~~~~l~~~-g-l~ 143 (231)
T 3kzx_A 87 ILYENSLEKSQKSDNF-------MLNDGAIELLDTLKEN--NI-------TMAIV-SNKNGE----RLRSEIHHK-N-LT 143 (231)
T ss_dssp HHHHHHHHHCCSCCCC-------EECTTHHHHHHHHHHT--TC-------EEEEE-EEEEHH----HHHHHHHHT-T-CG
T ss_pred HHHHHHHhhhcccccc-------eECcCHHHHHHHHHHC--CC-------eEEEE-ECCCHH----HHHHHHHHC-C-ch
Confidence 000000 0 0000000 0112344455544432 21 11111 111111 122333333 1 11
Q ss_pred CCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcc-eEEEEecCCcccccccccccccCcceEEeCCCC-
Q 003029 747 SNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAID-YVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF- 824 (856)
Q Consensus 747 ~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d-~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~- 824 (856)
..... ++.+.. ...+-.|+.+++.+++++| ++++ ++++||| +.||++| .+.++ -.+|.|++..
T Consensus 144 ~~f~~-i~~~~~----~~~~Kp~~~~~~~~~~~lg------i~~~~~~v~vGD-~~~Di~~-a~~aG--~~~v~~~~~~~ 208 (231)
T 3kzx_A 144 HYFDS-IIGSGD----TGTIKPSPEPVLAALTNIN------IEPSKEVFFIGD-SISDIQS-AIEAG--CLPIKYGSTNI 208 (231)
T ss_dssp GGCSE-EEEETS----SSCCTTSSHHHHHHHHHHT------CCCSTTEEEEES-SHHHHHH-HHHTT--CEEEEECC---
T ss_pred hheee-EEcccc----cCCCCCChHHHHHHHHHcC------CCcccCEEEEcC-CHHHHHH-HHHCC--CeEEEECCCCC
Confidence 11121 222221 2345667899999999999 6677 8999999 9999999 77664 2477776642
Q ss_pred ---ccccCCHHHHHHHHHHHHH
Q 003029 825 ---LHYLRMKMCMRFLSQNYLM 843 (856)
Q Consensus 825 ---~~~l~~~~~~~~~l~~~~~ 843 (856)
.+.+.+..++..+|++++.
T Consensus 209 ~~~~~~~~~~~el~~~l~~~l~ 230 (231)
T 3kzx_A 209 IKDILSFKNFYDIRNFICQLIN 230 (231)
T ss_dssp --CCEEESSHHHHHHHHHHHHC
T ss_pred CCCceeeCCHHHHHHHHHHHhc
Confidence 2899999999999998864
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=5.6e-06 Score=91.91 Aligned_cols=155 Identities=11% Similarity=0.049 Sum_probs=102.4
Q ss_pred CCceEEEeecccccCCh-HHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 003029 362 GRKVMLGVDRLDMIKGI-PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi-~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~p 440 (856)
...+++++|++...|+. ..+++++... ++.|+++ +++++.+ +....+ . .+ ...
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~----~v~~~~~-----~~~~~l----~----~~--------~~~ 271 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVE----AVIAVPP-----EHRALL----T----DL--------PDN 271 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEE----EEEECCG-----GGGGGC----T----TC--------CTT
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeE----EEEEECC-----cchhhc----c----cC--------CCC
Confidence 34677788999886666 8888888877 7777643 5555432 111111 1 00 013
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCC----CCchhhc--cCCeEEECC---
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF----AGAAQSL--GAGAILVNP--- 511 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~----aG~~~~l--g~~g~lVnP--- 511 (856)
|. +.++++..++ +..||++|.. |-..+.+|||+|+ .|+|+... .+.++.+ +..|++++|
T Consensus 272 v~-~~~~~~~~~l---l~~ad~~v~~----~G~~t~~Ea~~~G----~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~ 339 (391)
T 3tsa_A 272 AR-IAESVPLNLF---LRTCELVICA----GGSGTAFTATRLG----IPQLVLPQYFDQFDYARNLAAAGAGICLPDEQA 339 (391)
T ss_dssp EE-ECCSCCGGGT---GGGCSEEEEC----CCHHHHHHHHHTT----CCEEECCCSTTHHHHHHHHHHTTSEEECCSHHH
T ss_pred EE-EeccCCHHHH---HhhCCEEEeC----CCHHHHHHHHHhC----CCEEecCCcccHHHHHHHHHHcCCEEecCcccc
Confidence 55 4778877654 4999999954 4456889999994 78888443 3344444 346899998
Q ss_pred -CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 003029 512 -WNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETF 555 (856)
Q Consensus 512 -~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~f 555 (856)
.|+++++++|.++|+++. .+.++.+...+......+...++.+
T Consensus 340 ~~~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i 383 (391)
T 3tsa_A 340 QSDHEQFTDSIATVLGDTG-FAAAAIKLSDEITAMPHPAALVRTL 383 (391)
T ss_dssp HTCHHHHHHHHHHHHTCTH-HHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 799999999999999764 4555555555555666666655544
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=98.25 E-value=4.4e-06 Score=83.35 Aligned_cols=71 Identities=13% Similarity=0.128 Sum_probs=49.2
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccc-----------cccccCCChhHHHHHHHhhcCCCCeEEEEcCCC-HhhHHHH
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQI-----------REMELKLHPDLKQPLNALCHDPKTTIVVLSGSD-RNVLDKN 656 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~-----------~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~-~~~l~~~ 656 (856)
+..|+|+||+||||++..... ..+... ......+.|.+.++|++|.+ .|+.++|+||++ ...++..
T Consensus 25 ~~~k~vifDlDGTL~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~-~G~~v~ivT~~~~~~~~~~~ 102 (187)
T 2wm8_A 25 RLPKLAVFDLDYTLWPFWVDT-HVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQS-LGVPGAAASRTSEIEGANQL 102 (187)
T ss_dssp TSCSEEEECSBTTTBSSCTTT-SSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHH-HTCCEEEEECCSCHHHHHHH
T ss_pred hccCEEEEcCCCCcchHHHhh-ccCcchhhhcccchhhccCcccCcchhHHHHHHHHHH-CCceEEEEeCCCChHHHHHH
Confidence 457899999999998542100 000000 01234678899999999986 699999999998 6777777
Q ss_pred hcccC
Q 003029 657 FQEYN 661 (856)
Q Consensus 657 ~~~l~ 661 (856)
+..++
T Consensus 103 l~~~g 107 (187)
T 2wm8_A 103 LELFD 107 (187)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 76654
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.25 E-value=2.3e-06 Score=84.32 Aligned_cols=54 Identities=19% Similarity=0.196 Sum_probs=40.8
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCH
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~ 650 (856)
+|++|||+||||+.....- .. .....++.|.+.++|++|.+ .|..++|+|+++.
T Consensus 1 ~k~v~~D~DGtL~~~~~~~---~~--~~~~~~~~~g~~~~l~~L~~-~g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 1 MKLIILDRDGVVNQDSDAF---VK--SPDEWIALPGSLQAIARLTQ-ADWTVVLATNQSG 54 (179)
T ss_dssp CCEEEECSBTTTBCCCTTC---CC--SGGGCCBCTTHHHHHHHHHH-TTCEEEEEEECTT
T ss_pred CCEEEEcCCCccccCCCcc---CC--CHHHceECcCHHHHHHHHHH-CCCEEEEEECCCc
Confidence 4799999999999763210 00 01244678899999999986 6999999999873
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=1e-05 Score=90.19 Aligned_cols=100 Identities=15% Similarity=0.049 Sum_probs=66.0
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCC----CCchhhc--cCCeEEECCC--
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF----AGAAQSL--GAGAILVNPW-- 512 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~----aG~~~~l--g~~g~lVnP~-- 512 (856)
|.+ .++++ ...++..||++|. .|-+.++.|||+|+ .|+|+... .+.++.+ ...|+++++.
T Consensus 286 v~~-~~~~~---~~~ll~~ad~~v~----~gG~~t~~Ea~~~G----~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~ 353 (398)
T 4fzr_A 286 VLA-AGQFP---LSAIMPACDVVVH----HGGHGTTLTCLSEG----VPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQA 353 (398)
T ss_dssp EEE-ESCCC---HHHHGGGCSEEEE----CCCHHHHHHHHHTT----CCEEECCCSGGGHHHHHHHHHTTSEEECC----
T ss_pred EEE-eCcCC---HHHHHhhCCEEEe----cCCHHHHHHHHHhC----CCEEecCCchhHHHHHHHHHHcCCEEecCcccC
Confidence 554 67776 4567778999995 44467899999994 88888544 3555555 3468999887
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHH
Q 003029 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (856)
Q Consensus 513 d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (856)
|.++++++|.++|+++. .|.++.+..++......+...++
T Consensus 354 ~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 393 (398)
T 4fzr_A 354 GVESVLAACARIRDDSS-YVGNARRLAAEMATLPTPADIVR 393 (398)
T ss_dssp ---CHHHHHHHHHHCTH-HHHHHHHHHHHHTTSCCHHHHHH
T ss_pred CHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHcCCCHHHHHH
Confidence 78999999999999764 45555455555555565555443
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.18 E-value=5.9e-07 Score=93.34 Aligned_cols=70 Identities=9% Similarity=-0.083 Sum_probs=53.8
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCcceEEeCC---------------CCcc-ccCC
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTISTVRLDS---------------SFLH-YLRM 830 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~v~V~~---------------~~~~-~l~~ 830 (856)
.++.++..+++++| ++++++++||| +. ||+.| .+.++- .+|.|.. .+.+ .+.+
T Consensus 163 p~~~~~~~~~~~l~------~~~~~~i~iGD-~~~~Di~~-a~~aG~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~ 232 (251)
T 2pke_A 163 KDPQTYARVLSEFD------LPAERFVMIGN-SLRSDVEP-VLAIGG--WGIYTPYAVTWAHEQDHGVAADEPRLREVPD 232 (251)
T ss_dssp CSHHHHHHHHHHHT------CCGGGEEEEES-CCCCCCHH-HHHTTC--EEEECCCC-------------CCTTEEECSS
T ss_pred CCHHHHHHHHHHhC------cCchhEEEECC-CchhhHHH-HHHCCC--EEEEECCCCccccccccccccCCCCeeeeCC
Confidence 46899999999999 67899999999 98 99999 776643 2344421 1225 7999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 003029 831 KMCMRFLSQNYLMMARA 847 (856)
Q Consensus 831 ~~~~~~~l~~~~~~~~~ 847 (856)
..++..+|+++...|..
T Consensus 233 ~~el~~~l~~~~~~~~~ 249 (251)
T 2pke_A 233 PSGWPAAVRALDAQAGR 249 (251)
T ss_dssp GGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhChhhcc
Confidence 99999999988765543
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=98.17 E-value=1.9e-06 Score=80.87 Aligned_cols=53 Identities=17% Similarity=0.204 Sum_probs=41.0
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhh
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~ 652 (856)
.|+|+||+||||++....+ . ....+++.+.++|++|.+ +|+.++|+|||+...
T Consensus 1 ik~i~~DlDGTL~~~~~~~------~--~~~~~~~~~~~~l~~l~~-~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQANTSD------Y--RNVLPRLDVIEQLREYHQ-LGFEIVISTARNMRT 53 (126)
T ss_dssp CCEEEECSTTTTBCCCCSC------G--GGCCBCHHHHHHHHHHHH-TTCEEEEEECTTTTT
T ss_pred CCEEEEecCCCCCCCCCCc------c--ccCCCCHHHHHHHHHHHh-CCCeEEEEeCCChhh
Confidence 4799999999999863210 0 012577899999999986 699999999998743
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=98.16 E-value=2.7e-05 Score=91.07 Aligned_cols=172 Identities=9% Similarity=-0.040 Sum_probs=109.9
Q ss_pred CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEE-EEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003029 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ-IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (856)
Q Consensus 363 ~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~-v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (856)
..++.+..|+ .|..+..++++.+++++.|+. +.++. ++. . .+... .+.+++.+. .|.. .|
T Consensus 441 ~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s---~L~l~~~g~-~--~g~~~-~~~~~~~~~--GI~~--------Rv 501 (631)
T 3q3e_A 441 VVNIGIASTT--MKLNPYFLEALKAIRDRAKVK---VHFHFALGQ-S--NGITH-PYVERFIKS--YLGD--------SA 501 (631)
T ss_dssp EEEEEEEECS--TTCCHHHHHHHHHHHHHCSSE---EEEEEEESS-C--CGGGH-HHHHHHHHH--HHGG--------GE
T ss_pred eEEEEECCcc--ccCCHHHHHHHHHHHHhCCCc---EEEEEecCC-C--chhhH-HHHHHHHHc--CCCc--------cE
Confidence 3456667775 699999999999999999973 22222 331 1 22222 222222221 2221 35
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--------cCCeEEECCCC
Q 003029 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--------GAGAILVNPWN 513 (856)
Q Consensus 442 ~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--------g~~g~lVnP~d 513 (856)
. |.+.++.++..++|+.|||||.|+.+.| |++++|||+|| .|||.....+.+.-+ |-...+| ..|
T Consensus 502 ~-F~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmG----VPVVTl~G~~~asRvgaSlL~~~GLpE~LI-A~d 574 (631)
T 3q3e_A 502 T-AHPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLG----LVGVCKTGAEVHEHIDEGLFKRLGLPEWLI-ANT 574 (631)
T ss_dssp E-EECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTT----CCEEEECCSSHHHHHHHHHHHHTTCCGGGE-ESS
T ss_pred E-EcCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcC----CCEEeccCCcHHHHhHHHHHHhcCCCccee-cCC
Confidence 5 4789999999999999999999998877 99999999993 677765544444332 3333223 247
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHhH
Q 003029 514 ITEVANAIARALNMSPEEREKRHWHNFTHVTT---HTAQEWAETFVSELNDTV 563 (856)
Q Consensus 514 ~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~---~~~~~W~~~fl~~l~~~~ 563 (856)
.++.+++..++.++++ .+.+..+++++...+ ++ .|.+.|-+.++++.
T Consensus 575 ~eeYv~~Av~La~D~~-~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~~ 624 (631)
T 3q3e_A 575 VDEYVERAVRLAENHQ-ERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEKL 624 (631)
T ss_dssp HHHHHHHHHHHHHCHH-HHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHH-HHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHHH
Confidence 8999999999988754 566655555554322 22 45555555555443
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=3e-06 Score=85.07 Aligned_cols=64 Identities=9% Similarity=-0.067 Sum_probs=51.6
Q ss_pred CCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcc-eEEeCCCC-------ccccCCHHHHHHH
Q 003029 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIS-TVRLDSSF-------LHYLRMKMCMRFL 837 (856)
Q Consensus 766 gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~-~v~V~~~~-------~~~l~~~~~~~~~ 837 (856)
+-.|+.+++.+++++| ++++++++||| +.||++| .+.+ |+ +|.|++.. .|.+.+..++...
T Consensus 126 ~kp~~~~~~~~~~~~g------~~~~~~i~iGD-~~~Di~~-a~~a---G~~~i~v~~~~~~~~~~ad~v~~~~~el~~~ 194 (205)
T 3m9l_A 126 PKPHPGGLLKLAEAWD------VSPSRMVMVGD-YRFDLDC-GRAA---GTRTVLVNLPDNPWPELTDWHARDCAQLRDL 194 (205)
T ss_dssp CTTSSHHHHHHHHHTT------CCGGGEEEEES-SHHHHHH-HHHH---TCEEEECSSSSCSCGGGCSEECSSHHHHHHH
T ss_pred CCCCHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHH-HHHc---CCEEEEEeCCCCcccccCCEEeCCHHHHHHH
Confidence 4457889999999999 67899999999 9999999 6655 54 88886642 2888999988887
Q ss_pred HHH
Q 003029 838 SQN 840 (856)
Q Consensus 838 l~~ 840 (856)
|++
T Consensus 195 ~~~ 197 (205)
T 3m9l_A 195 LSA 197 (205)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=2.7e-06 Score=86.78 Aligned_cols=55 Identities=9% Similarity=0.076 Sum_probs=41.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHh
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 651 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~ 651 (856)
++|+++||+||||+....-. .. .....+.+.+.++|++|.+ .|+.++|+|+++..
T Consensus 24 ~~k~v~~D~DGTL~~~~~~~----~~--~~~~~~~pg~~e~L~~L~~-~G~~~~ivTn~~~~ 78 (211)
T 2gmw_A 24 SVPAIFLDRDGTINVDHGYV----HE--IDNFEFIDGVIDAMRELKK-MGFALVVVTNQSGI 78 (211)
T ss_dssp CBCEEEECSBTTTBCCCSSC----CS--GGGCCBCTTHHHHHHHHHH-TTCEEEEEEECTHH
T ss_pred cCCEEEEcCCCCeECCCCcc----cC--cccCcCCcCHHHHHHHHHH-CCCeEEEEECcCCc
Confidence 46899999999999763111 00 1234677899999999986 69999999999864
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.09 E-value=7.1e-07 Score=90.92 Aligned_cols=69 Identities=9% Similarity=-0.076 Sum_probs=52.7
Q ss_pred CCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCcceEEeCCC-------CccccCCHHHHHHH
Q 003029 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTISTVRLDSS-------FLHYLRMKMCMRFL 837 (856)
Q Consensus 766 gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~v~V~~~-------~~~~l~~~~~~~~~ 837 (856)
+-.|+.+++.+++++| ++++++++||| +. ||++| .+.++-..+.|.-++. +.|.+.+..++..+
T Consensus 154 ~kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~~Di~~-a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~~~el~~~ 225 (234)
T 3u26_A 154 FKPHPRIFELALKKAG------VKGEEAVYVGD-NPVKDCGG-SKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKI 225 (234)
T ss_dssp CTTSHHHHHHHHHHHT------CCGGGEEEEES-CTTTTHHH-HHTTTCEEEEECSSSTTGGGGGGCSEEESSTHHHHHH
T ss_pred CCcCHHHHHHHHHHcC------CCchhEEEEcC-CcHHHHHH-HHHcCCEEEEECCCCCccccccCCCEeeCCHHHHHHH
Confidence 4567888999999999 67899999999 97 99999 8777533233332332 22889999999999
Q ss_pred HHHHH
Q 003029 838 SQNYL 842 (856)
Q Consensus 838 l~~~~ 842 (856)
|+++.
T Consensus 226 l~~~~ 230 (234)
T 3u26_A 226 VDELN 230 (234)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 88764
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.09 E-value=1.3e-06 Score=88.70 Aligned_cols=70 Identities=10% Similarity=-0.148 Sum_probs=54.2
Q ss_pred EeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC---------CccccCCHHH
Q 003029 763 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS---------FLHYLRMKMC 833 (856)
Q Consensus 763 ~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~---------~~~~l~~~~~ 833 (856)
.+.+..|+.+++.+++++| ++++++++||| +.||++| .+.++-..+.|.-++. +.|.+.+..+
T Consensus 138 ~~~~kp~~~~~~~~~~~lg------i~~~~~i~iGD-~~~Di~~-a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~e 209 (226)
T 3mc1_A 138 DGKLSTKEDVIRYAMESLN------IKSDDAIMIGD-REYDVIG-ALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDE 209 (226)
T ss_dssp TSSSCSHHHHHHHHHHHHT------CCGGGEEEEES-SHHHHHH-HHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHH
T ss_pred CCCCCCCHHHHHHHHHHhC------cCcccEEEECC-CHHHHHH-HHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHH
Confidence 3667899999999999999 67889999999 9999999 8877543333333332 1288889988
Q ss_pred HHHHHHH
Q 003029 834 MRFLSQN 840 (856)
Q Consensus 834 ~~~~l~~ 840 (856)
+..+|++
T Consensus 210 l~~~~~~ 216 (226)
T 3mc1_A 210 LHKKILE 216 (226)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 8888764
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.09 E-value=9.7e-06 Score=81.61 Aligned_cols=47 Identities=9% Similarity=0.151 Sum_probs=39.8
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeC
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLD 821 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~ 821 (856)
..+..|+.+++.+++++| ++++++++||| +.||++| ++.+ |+++.+.
T Consensus 138 ~~~k~k~~~~~~~~~~~g------~~~~~~i~vGD-s~~Di~~-a~~a---G~~~~~~ 184 (217)
T 3m1y_A 138 MFSHSKGEMLLVLQRLLN------ISKTNTLVVGD-GANDLSM-FKHA---HIKIAFN 184 (217)
T ss_dssp CSTTHHHHHHHHHHHHHT------CCSTTEEEEEC-SGGGHHH-HTTC---SEEEEES
T ss_pred CCCCChHHHHHHHHHHcC------CCHhHEEEEeC-CHHHHHH-HHHC---CCeEEEC
Confidence 467899999999999999 67899999999 9999999 6655 5666663
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.08 E-value=3.2e-06 Score=86.41 Aligned_cols=70 Identities=9% Similarity=-0.089 Sum_probs=54.9
Q ss_pred EeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC---------CccccCCHHH
Q 003029 763 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS---------FLHYLRMKMC 833 (856)
Q Consensus 763 ~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~---------~~~~l~~~~~ 833 (856)
.+.+..|+.+++.+++++| ++++++++||| +.||++| .+.++-..+.|.-++. +.|.+.+..+
T Consensus 156 ~~~~kp~~~~~~~~~~~lg------~~~~~~i~vGD-~~~Di~~-a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~e 227 (237)
T 4ex6_A 156 VERGKPHPDMALHVARGLG------IPPERCVVIGD-GVPDAEM-GRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPA 227 (237)
T ss_dssp SSSCTTSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHH-HHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHH
T ss_pred CCCCCCCHHHHHHHHHHcC------CCHHHeEEEcC-CHHHHHH-HHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHH
Confidence 3567889999999999999 67899999999 9999999 8877543334433432 2288999999
Q ss_pred HHHHHHH
Q 003029 834 MRFLSQN 840 (856)
Q Consensus 834 ~~~~l~~ 840 (856)
+..+|++
T Consensus 228 l~~~l~~ 234 (237)
T 4ex6_A 228 AVTAVLD 234 (237)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 9888875
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.06 E-value=3e-07 Score=93.79 Aligned_cols=208 Identities=10% Similarity=0.034 Sum_probs=106.3
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh-hcCCCCeEEEEcCCCHhh-HHHHhcccCce----
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL-CHDPKTTIVVLSGSDRNV-LDKNFQEYNLW---- 663 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L-~~d~g~~V~I~SGR~~~~-l~~~~~~l~lg---- 663 (856)
.+|+|+||+||||++.. ....+...++++++ .......+..++||+... +..++..+++.
T Consensus 3 ~~k~iifDlDGTL~d~~--------------~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 68 (234)
T 2hcf_A 3 SRTLVLFDIDGTLLKVE--------------SMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEI 68 (234)
T ss_dssp CCEEEEECCBTTTEEEC--------------THHHHHHHHHHHHHHSCCCCC---CCTTCCHHHHHHHHHHTTTCCHHHH
T ss_pred cceEEEEcCCCCcccCc--------------cchHHHHHHHHHHHhCCCCccchhhhcCCChHHHHHHHHHHcCCCcccc
Confidence 46899999999999862 23456677778773 322223577889999877 66666654431
Q ss_pred ---EEeeCceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHH
Q 003029 664 ---LAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQH 740 (856)
Q Consensus 664 ---liaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~ 740 (856)
+...+|.+...-...+.. . .....+.+.++++...++ +|. .+.+- -+...+. ....++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~l~~l~~~-~g~-------~~~i~-t~~~~~~----~~~~l~~ 130 (234)
T 2hcf_A 69 ADKFDKAKETYIALFRERARR---E--DITLLEGVRELLDALSSR-SDV-------LLGLL-TGNFEAS----GRHKLKL 130 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHCCG---G--GEEECTTHHHHHHHHHTC-TTE-------EEEEE-CSSCHHH----HHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHhcc---C--CCCcCCCHHHHHHHHHhC-CCc-------eEEEE-cCCcHHH----HHHHHHH
Confidence 222233322110000000 0 000012344455544322 121 11111 1112111 1122222
Q ss_pred HhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEe
Q 003029 741 LWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRL 820 (856)
Q Consensus 741 L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V 820 (856)
+ .+...... ++.+.. +.+++-.+..+++++++++|.. ++++++++||| +.||++| .+.++-. +|.|
T Consensus 131 ~--~l~~~f~~-~~~~~~---~~~~~k~~~~~~~~~~~~lg~~----~~~~~~i~iGD-~~~Di~~-a~~aG~~--~i~v 196 (234)
T 2hcf_A 131 P--GIDHYFPF-GAFADD---ALDRNELPHIALERARRMTGAN----YSPSQIVIIGD-TEHDIRC-ARELDAR--SIAV 196 (234)
T ss_dssp T--TCSTTCSC-EECTTT---CSSGGGHHHHHHHHHHHHHCCC----CCGGGEEEEES-SHHHHHH-HHTTTCE--EEEE
T ss_pred C--CchhhcCc-ceecCC---CcCccchHHHHHHHHHHHhCCC----CCcccEEEECC-CHHHHHH-HHHCCCc--EEEE
Confidence 2 11111111 222321 1122224567889999998710 24789999999 9999999 7766422 3555
Q ss_pred CCC-----------CccccCCHHHHHHHHHHHHH
Q 003029 821 DSS-----------FLHYLRMKMCMRFLSQNYLM 843 (856)
Q Consensus 821 ~~~-----------~~~~l~~~~~~~~~l~~~~~ 843 (856)
... +.|.+.+..++..+|++++.
T Consensus 197 ~~~~~~~~~~~~~~a~~v~~~~~el~~~l~~~~~ 230 (234)
T 2hcf_A 197 ATGNFTMEELARHKPGTLFKNFAETDEVLASILT 230 (234)
T ss_dssp CCSSSCHHHHHTTCCSEEESCSCCHHHHHHHHHC
T ss_pred cCCCCCHHHHHhCCCCEEeCCHHhHHHHHHHHhc
Confidence 432 23778899999999988763
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=98.03 E-value=8.6e-06 Score=85.37 Aligned_cols=67 Identities=7% Similarity=0.119 Sum_probs=50.0
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcc----cCc---
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE----YNL--- 662 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~----l~l--- 662 (856)
..|+|+||+||||++.. ..+ +.+.++|+.|.+ .|..++++|||+......+... +++
T Consensus 4 ~~k~v~fDlDGTL~~~~--------------~~~-~~~~~~l~~l~~-~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~~ 67 (264)
T 1yv9_A 4 DYQGYLIDLDGTIYLGK--------------EPI-PAGKRFVERLQE-KDLPFLFVTNNTTKSPETVAQRLANEFDIHVP 67 (264)
T ss_dssp SCCEEEECCBTTTEETT--------------EEC-HHHHHHHHHHHH-TTCCEEEEECCCSSCHHHHHHHHHHHSCCCCC
T ss_pred cCCEEEEeCCCeEEeCC--------------EEC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCC
Confidence 47899999999999862 224 688899999986 6999999999988776665543 332
Q ss_pred --eEEeeCceEE
Q 003029 663 --WLAAENGMFL 672 (856)
Q Consensus 663 --gliaenG~~i 672 (856)
.+++.+|+.+
T Consensus 68 ~~~~~~~~~~~~ 79 (264)
T 1yv9_A 68 ASLVYTATLATI 79 (264)
T ss_dssp GGGEEEHHHHHH
T ss_pred hhhEEcHHHHHH
Confidence 3666666543
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=6e-06 Score=84.87 Aligned_cols=66 Identities=9% Similarity=-0.085 Sum_probs=49.0
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC---------CC-ccccCCHHHHHH
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS---------SF-LHYLRMKMCMRF 836 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~---------~~-~~~l~~~~~~~~ 836 (856)
-.|..++..+++++| ++++++++||| +.||+.| .+.++- .++.|.. .+ .|.+.+..++..
T Consensus 161 Kp~~~~~~~~~~~~~------~~~~~~~~iGD-~~~Di~~-a~~aG~--~~~~v~~~~~~~~~~~~~~~~~~~~~~el~~ 230 (240)
T 2no4_A 161 KPDPRIYQFACDRLG------VNPNEVCFVSS-NAWDLGG-AGKFGF--NTVRINRQGNPPEYEFAPLKHQVNSLSELWP 230 (240)
T ss_dssp TTSHHHHHHHHHHHT------CCGGGEEEEES-CHHHHHH-HHHHTC--EEEEECTTCCCCCCTTSCCSEEESSGGGHHH
T ss_pred CCCHHHHHHHHHHcC------CCcccEEEEeC-CHHHHHH-HHHCCC--EEEEECCCCCCCcccCCCCceeeCCHHHHHH
Confidence 357788999999999 67899999999 9999999 776642 2344421 13 467888999988
Q ss_pred HHHHHH
Q 003029 837 LSQNYL 842 (856)
Q Consensus 837 ~l~~~~ 842 (856)
+|++++
T Consensus 231 ~l~~~~ 236 (240)
T 2no4_A 231 LLAKNV 236 (240)
T ss_dssp HHCC--
T ss_pred HHHHhh
Confidence 887766
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.97 E-value=1.1e-07 Score=95.84 Aligned_cols=70 Identities=9% Similarity=-0.033 Sum_probs=47.5
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-----------CccccCCHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS-----------FLHYLRMKM 832 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~-----------~~~~l~~~~ 832 (856)
..+..|+.++..+++++| ++++.+++||| +.||++| ++.++- .++.|.+. +.|.+.+..
T Consensus 142 ~~~k~~~~~~~~~~~~~~------~~~~~~i~iGD-~~nDi~~-~~~aG~--~~~~~~~~~~~~~~l~~~~ad~v~~~~~ 211 (225)
T 3d6j_A 142 THHKPDPEGLLLAIDRLK------ACPEEVLYIGD-STVDAGT-AAAAGV--SFTGVTSGMTTAQEFQAYPYDRIISTLG 211 (225)
T ss_dssp SSCTTSTHHHHHHHHHTT------CCGGGEEEEES-SHHHHHH-HHHHTC--EEEEETTSSCCTTGGGGSCCSEEESSGG
T ss_pred CCCCCChHHHHHHHHHhC------CChHHeEEEcC-CHHHHHH-HHHCCC--eEEEECCCCCChHHHhhcCCCEEECCHH
Confidence 445677899999999999 67899999999 9999999 876632 24454321 127788888
Q ss_pred HHHHHHHHHHH
Q 003029 833 CMRFLSQNYLM 843 (856)
Q Consensus 833 ~~~~~l~~~~~ 843 (856)
++..+|+++..
T Consensus 212 el~~~l~~~~~ 222 (225)
T 3d6j_A 212 QLISVPEDKSG 222 (225)
T ss_dssp GGC--------
T ss_pred HHHHhhhhhcC
Confidence 88888877653
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.95 E-value=2.9e-07 Score=93.68 Aligned_cols=67 Identities=7% Similarity=-0.034 Sum_probs=51.6
Q ss_pred CCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCcceEEeCCC---------CccccCCHHHH
Q 003029 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTISTVRLDSS---------FLHYLRMKMCM 834 (856)
Q Consensus 765 ~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~v~V~~~---------~~~~l~~~~~~ 834 (856)
.+-.|+.+++.+++++| ++++++++||| +. ||+.| .+.++- .++.|... +.|.+.+..++
T Consensus 153 ~~kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~~Di~~-a~~aG~--~~~~v~~~~~~~~~~~~~~~~~~~l~el 222 (230)
T 3vay_A 153 IGKPDPAPFLEALRRAK------VDASAAVHVGD-HPSDDIAG-AQQAGM--RAIWYNPQGKAWDADRLPDAEIHNLSQL 222 (230)
T ss_dssp CCTTSHHHHHHHHHHHT------CCGGGEEEEES-CTTTTHHH-HHHTTC--EEEEECTTCCCCCSSSCCSEEESSGGGH
T ss_pred CCCcCHHHHHHHHHHhC------CCchheEEEeC-ChHHHHHH-HHHCCC--EEEEEcCCCCCCcccCCCCeeECCHHHH
Confidence 45567999999999999 67899999999 97 99999 766532 24555321 12899999999
Q ss_pred HHHHHHH
Q 003029 835 RFLSQNY 841 (856)
Q Consensus 835 ~~~l~~~ 841 (856)
..+|+++
T Consensus 223 ~~~l~~~ 229 (230)
T 3vay_A 223 PEVLARW 229 (230)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 9888754
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.92 E-value=0.0003 Score=77.90 Aligned_cols=146 Identities=13% Similarity=0.034 Sum_probs=86.5
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEE
Q 003029 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (856)
Q Consensus 364 ~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 443 (856)
.+++..|++...+.-..+++|++.+... .++.++.+++. ..++.+.+... ..+. ++.+
T Consensus 182 ~ilv~gGs~g~~~~~~~~~~al~~l~~~-----~~~~vi~~~G~-----~~~~~~~~~~~----~~~~--------~~~v 239 (365)
T 3s2u_A 182 NLLVLGGSLGAEPLNKLLPEALAQVPLE-----IRPAIRHQAGR-----QHAEITAERYR----TVAV--------EADV 239 (365)
T ss_dssp EEEECCTTTTCSHHHHHHHHHHHTSCTT-----TCCEEEEECCT-----TTHHHHHHHHH----HTTC--------CCEE
T ss_pred EEEEECCcCCccccchhhHHHHHhcccc-----cceEEEEecCc-----cccccccceec----cccc--------cccc
Confidence 3455567877766666666776655322 12334444322 12233333332 2221 1222
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCch--------hhc-c-CCeEEECCC-
Q 003029 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA--------QSL-G-AGAILVNPW- 512 (856)
Q Consensus 444 ~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~--------~~l-g-~~g~lVnP~- 512 (856)
.+++ +++..+|+.||++|.-| | +.++.|+++|+ .|.|+..+.++. +.+ . ..|++++..
T Consensus 240 -~~f~--~dm~~~l~~aDlvI~ra---G-~~Tv~E~~a~G----~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~ 308 (365)
T 3s2u_A 240 -APFI--SDMAAAYAWADLVICRA---G-ALTVSELTAAG----LPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKS 308 (365)
T ss_dssp -ESCC--SCHHHHHHHCSEEEECC---C-HHHHHHHHHHT----CCEEECC-----CCHHHHHHHHHHTTTSEEECCTTT
T ss_pred -ccch--hhhhhhhccceEEEecC---C-cchHHHHHHhC----CCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCC
Confidence 3444 46899999999998644 5 67888999994 788887665442 223 2 247888655
Q ss_pred -CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 003029 513 -NITEVANAIARALNMSPEEREKRHWHNFTHV 543 (856)
Q Consensus 513 -d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v 543 (856)
+++.++++|.++|++++ .+++|.+++++..
T Consensus 309 ~~~~~L~~~i~~ll~d~~-~~~~m~~~a~~~~ 339 (365)
T 3s2u_A 309 TGAAELAAQLSEVLMHPE-TLRSMADQARSLA 339 (365)
T ss_dssp CCHHHHHHHHHHHHHCTH-HHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHCCHH-HHHHHHHHHHhcC
Confidence 58999999999999874 5566666665543
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.91 E-value=5.9e-06 Score=83.47 Aligned_cols=62 Identities=15% Similarity=0.007 Sum_probs=46.1
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCcceEEeC------CC-------C-ccccCCH
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTISTVRLD------SS-------F-LHYLRMK 831 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~v~V~------~~-------~-~~~l~~~ 831 (856)
-.|+.+++.+++++| ++++++++||| +. ||++| .+.++- .+|.|. +. . .|.+.+.
T Consensus 157 kpk~~~~~~~~~~lg------i~~~~~i~iGD-~~~~Di~~-a~~aG~--~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l 226 (234)
T 3ddh_A 157 DKTEKEYLRLLSILQ------IAPSELLMVGN-SFKSDIQP-VLSLGG--YGVHIPFEVMWKHEVTETFAHERLKQVKRL 226 (234)
T ss_dssp CCSHHHHHHHHHHHT------CCGGGEEEEES-CCCCCCHH-HHHHTC--EEEECCCCTTCCCC---CCCCTTEEECSSG
T ss_pred CCCHHHHHHHHHHhC------CCcceEEEECC-CcHHHhHH-HHHCCC--eEEEecCCcccccCCcccccCCCceecccH
Confidence 369999999999999 67899999999 96 99999 776642 244441 11 1 2667787
Q ss_pred HHHHHHH
Q 003029 832 MCMRFLS 838 (856)
Q Consensus 832 ~~~~~~l 838 (856)
.++..+|
T Consensus 227 ~el~~~l 233 (234)
T 3ddh_A 227 DDLLSLL 233 (234)
T ss_dssp GGHHHHC
T ss_pred HHHHHhc
Confidence 7776654
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.90 E-value=1.5e-06 Score=89.32 Aligned_cols=72 Identities=7% Similarity=-0.180 Sum_probs=58.2
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-----------CccccCCHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS-----------FLHYLRMKM 832 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~-----------~~~~l~~~~ 832 (856)
..+..|+.+++.+++++| ++++++++||| +.||++| .+.++- .+|.|... +.|.+.+..
T Consensus 162 ~~~kp~~~~~~~~~~~lg------~~~~~~i~vGD-~~~Di~~-a~~aG~--~~i~v~~~~~~~~~l~~~~ad~v~~~~~ 231 (247)
T 3dv9_A 162 KYGKPNPEPYLMALKKGG------FKPNEALVIEN-APLGVQA-GVAAGI--FTIAVNTGPLHDNVLLNEGANLLFHSMP 231 (247)
T ss_dssp SSCTTSSHHHHHHHHHHT------CCGGGEEEEEC-SHHHHHH-HHHTTS--EEEEECCSSSCHHHHHTTTCSEEESSHH
T ss_pred CCCCCCCHHHHHHHHHcC------CChhheEEEeC-CHHHHHH-HHHCCC--eEEEEcCCCCCHHHHHhcCCCEEECCHH
Confidence 567788999999999999 67899999999 9999999 776642 35666542 228899999
Q ss_pred HHHHHHHHHHHHH
Q 003029 833 CMRFLSQNYLMMA 845 (856)
Q Consensus 833 ~~~~~l~~~~~~~ 845 (856)
++..+|++++.+.
T Consensus 232 el~~~l~~~~~~~ 244 (247)
T 3dv9_A 232 DFNKNWETLQSAL 244 (247)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987643
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.88 E-value=8.7e-07 Score=90.05 Aligned_cols=64 Identities=8% Similarity=-0.010 Sum_probs=49.2
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCcce-EEe--CCC-------CccccCCHHHHH
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTIST-VRL--DSS-------FLHYLRMKMCMR 835 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~-v~V--~~~-------~~~~l~~~~~~~ 835 (856)
-.|..++..+++++| ++++++++||| +. ||++| .+.+ |+. +.| ++. +.|.+.+..++.
T Consensus 158 kp~~~~~~~~~~~lg------i~~~~~~~iGD-~~~nDi~~-a~~a---G~~~~~~~~~~~~~~~~~~~~~~~~~~~el~ 226 (235)
T 2om6_A 158 KPRKEMFEKVLNSFE------VKPEESLHIGD-TYAEDYQG-ARKV---GMWAVWINQEGDKVRKLEERGFEIPSIANLK 226 (235)
T ss_dssp TTCHHHHHHHHHHTT------CCGGGEEEEES-CTTTTHHH-HHHT---TSEEEEECTTCCSCEEEETTEEEESSGGGHH
T ss_pred CCCHHHHHHHHHHcC------CCccceEEECC-ChHHHHHH-HHHC---CCEEEEECCCCCCcccCCCCcchHhhHHHHH
Confidence 357899999999999 67899999999 98 99999 7765 333 333 321 127889999998
Q ss_pred HHHHHH
Q 003029 836 FLSQNY 841 (856)
Q Consensus 836 ~~l~~~ 841 (856)
.+|+++
T Consensus 227 ~~l~~~ 232 (235)
T 2om6_A 227 DVIELI 232 (235)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 888765
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.88 E-value=3.3e-06 Score=87.15 Aligned_cols=69 Identities=4% Similarity=-0.205 Sum_probs=53.3
Q ss_pred EEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeC---------------CCCc
Q 003029 761 EVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLD---------------SSFL 825 (856)
Q Consensus 761 EV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~---------------~~~~ 825 (856)
|..+.+..|+.+++.+++++| ++++++++||| +.||++| .+.++- .++.|. ...+
T Consensus 167 ~~~~~~kp~~~~~~~~~~~lg------i~~~~~~~iGD-~~~Di~~-a~~aG~--~~~~~~~~~~~g~~~~~~l~~~~~a 236 (254)
T 3umc_A 167 DLFGHYKPDPQVYLGACRLLD------LPPQEVMLCAA-HNYDLKA-ARALGL--KTAFIARPLEYGPGQSQDLAAEQDW 236 (254)
T ss_dssp HHHTCCTTSHHHHHHHHHHHT------CCGGGEEEEES-CHHHHHH-HHHTTC--EEEEECCTTTTCTTCCSSSSCSSCC
T ss_pred cccccCCCCHHHHHHHHHHcC------CChHHEEEEcC-chHhHHH-HHHCCC--eEEEEecCCccCCCCCcccccCCCC
Confidence 445678899999999999999 67899999999 9999999 776642 234443 0112
Q ss_pred -cccCCHHHHHHHHH
Q 003029 826 -HYLRMKMCMRFLSQ 839 (856)
Q Consensus 826 -~~l~~~~~~~~~l~ 839 (856)
|.+.+..++..+|.
T Consensus 237 d~v~~~l~el~~~l~ 251 (254)
T 3umc_A 237 DLIASDLLDLHRQLA 251 (254)
T ss_dssp SEEESSHHHHHHHHH
T ss_pred cEEECCHHHHHHHhc
Confidence 78888888887764
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=97.84 E-value=6.7e-05 Score=84.34 Aligned_cols=103 Identities=13% Similarity=-0.032 Sum_probs=72.8
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC----chhhc--cCCeEEECCC--
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG----~~~~l--g~~g~lVnP~-- 512 (856)
|.+ .+++++. .+|+.||+||..| |. .+.+|||+|+ .|+|++...| .++.+ ...|+++++.
T Consensus 285 v~~-~~~~~~~---~~l~~ad~~v~~~---G~-~t~~Ea~~~G----~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~ 352 (430)
T 2iyf_A 285 VEV-HDWVPQL---AILRQADLFVTHA---GA-GGSQEGLATA----TPMIAVPQAVDQFGNADMLQGLGVARKLATEEA 352 (430)
T ss_dssp EEE-ESSCCHH---HHHTTCSEEEECC---CH-HHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHTTSEEECCCC-C
T ss_pred eEE-EecCCHH---HHhhccCEEEECC---Cc-cHHHHHHHhC----CCEEECCCccchHHHHHHHHHcCCEEEcCCCCC
Confidence 554 6788865 6899999999865 33 6899999994 8899887755 23334 3468899877
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 003029 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 556 (856)
Q Consensus 513 d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl 556 (856)
|+++++++|.++|+++ +.++++.+..++....+++...++.+.
T Consensus 353 ~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~ 395 (430)
T 2iyf_A 353 TADLLRETALALVDDP-EVARRLRRIQAEMAQEGGTRRAADLIE 395 (430)
T ss_dssp CHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 8999999999999854 355554455555555555555555443
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.81 E-value=4.3e-06 Score=85.53 Aligned_cols=55 Identities=18% Similarity=0.279 Sum_probs=41.9
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHh
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 651 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~ 651 (856)
..|++++|+||||+....-. . ......+.+.+.++|++|.+ .|..++|+|+++..
T Consensus 30 ~~k~i~~D~DGtl~~~~~y~----~--~~~~~~~~~g~~e~L~~L~~-~G~~~~i~Tn~~~~ 84 (218)
T 2o2x_A 30 HLPALFLDRDGTINVDTDYP----S--DPAEIVLRPQMLPAIATANR-AGIPVVVVTNQSGI 84 (218)
T ss_dssp SCCCEEECSBTTTBCCCSCT----T--CGGGCCBCGGGHHHHHHHHH-HTCCEEEEEECHHH
T ss_pred cCCEEEEeCCCCcCCCCccc----C--CcccCeECcCHHHHHHHHHH-CCCEEEEEcCcCCC
Confidence 47899999999999762111 0 01235678899999999986 69999999999764
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.80 E-value=1.9e-06 Score=88.85 Aligned_cols=68 Identities=7% Similarity=-0.150 Sum_probs=55.2
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-----------CccccCCHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS-----------FLHYLRMKM 832 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~-----------~~~~l~~~~ 832 (856)
..+..|+.+++.+++++| ++++++++||| +.||++| .+.++- .+|.|... +.|.+.+..
T Consensus 163 ~~~kp~~~~~~~~~~~lg------~~~~~~i~vGD-~~~Di~~-a~~aG~--~~i~v~~~~~~~~~l~~~~ad~v~~s~~ 232 (243)
T 3qxg_A 163 KYGKPNPEPYLMALKKGG------LKADEAVVIEN-APLGVEA-GHKAGI--FTIAVNTGPLDGQVLLDAGADLLFPSMQ 232 (243)
T ss_dssp SSCTTSSHHHHHHHHHTT------CCGGGEEEEEC-SHHHHHH-HHHTTC--EEEEECCSSSCHHHHHHTTCSEEESCHH
T ss_pred CCCCCChHHHHHHHHHcC------CCHHHeEEEeC-CHHHHHH-HHHCCC--EEEEEeCCCCCHHHHHhcCCCEEECCHH
Confidence 456788999999999999 67899999999 9999999 776632 25666432 228899999
Q ss_pred HHHHHHHHH
Q 003029 833 CMRFLSQNY 841 (856)
Q Consensus 833 ~~~~~l~~~ 841 (856)
++..+|+++
T Consensus 233 el~~~l~~l 241 (243)
T 3qxg_A 233 TLCDSWDTI 241 (243)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999999887
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=8.6e-07 Score=93.96 Aligned_cols=68 Identities=15% Similarity=0.022 Sum_probs=51.0
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCc-ceEEEEecCCcccccccccccccCcceEEeCCC----------Cc-cccCCH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAI-DYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS----------FL-HYLRMK 831 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~-d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~----------~~-~~l~~~ 831 (856)
..+-.|+.+++++++++| +++ +.+++||| +.||+.| .+.++ .+..+.+... .+ |.+.+.
T Consensus 201 ~~~Kp~~~~~~~~~~~lg------i~~~~~~i~vGD-~~~Di~~-a~~aG-~~~~~~~~~~~~~~~~~~~~~ad~vi~sl 271 (282)
T 3nuq_A 201 LVCKPHVKAFEKAMKESG------LARYENAYFIDD-SGKNIET-GIKLG-MKTCIHLVENEVNEILGQTPEGAIVISDI 271 (282)
T ss_dssp CCCTTSHHHHHHHHHHHT------CCCGGGEEEEES-CHHHHHH-HHHHT-CSEEEEECSCCC----CCCCTTCEEESSG
T ss_pred cCCCcCHHHHHHHHHHcC------CCCcccEEEEcC-CHHHHHH-HHHCC-CeEEEEEcCCccccccccCCCCCEEeCCH
Confidence 445689999999999999 667 99999999 9999999 77663 3334455332 12 778888
Q ss_pred HHHHHHHHH
Q 003029 832 MCMRFLSQN 840 (856)
Q Consensus 832 ~~~~~~l~~ 840 (856)
.++..+|.+
T Consensus 272 ~el~~~l~~ 280 (282)
T 3nuq_A 272 LELPHVVSD 280 (282)
T ss_dssp GGGGGTSGG
T ss_pred HHHHHHhhh
Confidence 887776654
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.75 E-value=4.4e-05 Score=75.83 Aligned_cols=61 Identities=8% Similarity=-0.148 Sum_probs=44.5
Q ss_pred CCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC--------CccccCCHHHHHH
Q 003029 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS--------FLHYLRMKMCMRF 836 (856)
Q Consensus 766 gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~--------~~~~l~~~~~~~~ 836 (856)
+-.|+.+++.+++++| ++++++++||| +.||++| .+.++- .+|.|... +.|.+.+..++..
T Consensus 144 ~kp~~~~~~~~~~~~~------~~~~~~~~iGD-~~~Di~~-a~~aG~--~~~~~~~~~~~~~~~~a~~~~~~~~el~~ 212 (214)
T 3e58_A 144 SKPNPEIYLTALKQLN------VQASRALIIED-SEKGIAA-GVAADV--EVWAIRDNEFGMDQSAAKGLLDSLTDVLD 212 (214)
T ss_dssp CTTSSHHHHHHHHHHT------CCGGGEEEEEC-SHHHHHH-HHHTTC--EEEEECCSSSCCCCTTSSEEESSGGGGGG
T ss_pred CCCChHHHHHHHHHcC------CChHHeEEEec-cHhhHHH-HHHCCC--EEEEECCCCccchhccHHHHHHHHHHHHh
Confidence 3457888999999999 67899999999 9999999 766642 35555432 1277777666544
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=9.1e-05 Score=77.61 Aligned_cols=57 Identities=7% Similarity=-0.004 Sum_probs=42.1
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-ccc--CCHHHHHHHH
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYL--RMKMCMRFLS 838 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l--~~~~~~~~~l 838 (856)
+|+.+++.+.+.+ .+++||| +.||.+| ++.+ +++|.+++.. + +-+ .+..++.++|
T Consensus 194 ~k~~~~k~~~~~~-----------~~~~vGD-~~nDi~~-~~~A---g~~va~~~~~~~~~~~a~~~~~~~~~~~l~~~l 257 (280)
T 3skx_A 194 EKAEKVKEVQQKY-----------VTAMVGD-GVNDAPA-LAQA---DVGIAIGAGTDVAVETADIVLVRNDPRDVAAIV 257 (280)
T ss_dssp GHHHHHHHHHTTS-----------CEEEEEC-TTTTHHH-HHHS---SEEEECSCCSSSCCCSSSEECSSCCTHHHHHHH
T ss_pred HHHHHHHHHHhcC-----------CEEEEeC-CchhHHH-HHhC---CceEEecCCcHHHHhhCCEEEeCCCHHHHHHHH
Confidence 4888888776542 5799999 9999999 7766 4677776631 2 444 8888888877
Q ss_pred HH
Q 003029 839 QN 840 (856)
Q Consensus 839 ~~ 840 (856)
+.
T Consensus 258 ~~ 259 (280)
T 3skx_A 258 EL 259 (280)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00026 Score=72.04 Aligned_cols=46 Identities=13% Similarity=0.090 Sum_probs=34.7
Q ss_pred CCHHHHHHHHHHHhC---cCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC
Q 003029 767 VTKGAAIDRILAEIV---HSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 767 vnKG~av~~ll~~l~---~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
..|..+++.++++++ . +++.+++||| +.||.+| ++.+ +..|.|.++
T Consensus 158 ~~K~~~~~~~~~~~~~~~~------~~~~~~~vGD-s~~D~~~-~~~a---g~~~~~~~~ 206 (232)
T 3fvv_A 158 EGKVVRVNQWLAGMGLALG------DFAESYFYSD-SVNDVPL-LEAV---TRPIAANPS 206 (232)
T ss_dssp HHHHHHHHHHHHHTTCCGG------GSSEEEEEEC-CGGGHHH-HHHS---SEEEEESCC
T ss_pred hHHHHHHHHHHHHcCCCcC------chhheEEEeC-CHhhHHH-HHhC---CCeEEECcC
Confidence 356777777777766 3 4789999999 9999999 7665 566777554
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00012 Score=71.36 Aligned_cols=124 Identities=15% Similarity=0.102 Sum_probs=84.4
Q ss_pred CCceEEEeeccc---ccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCc
Q 003029 362 GRKVMLGVDRLD---MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 438 (856)
Q Consensus 362 ~~~iIl~V~Rld---~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~ 438 (856)
...+++++|++. +.|++..+++|+..+ + + .++.++++.. .+ .+ .
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~----~-~----~~~~~~g~~~---~~-------------~~----~---- 67 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI----P-Q----KVLWRFDGNK---PD-------------TL----G---- 67 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS----S-S----EEEEECCSSC---CT-------------TC----C----
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC----C-C----eEEEEECCcC---cc-------------cC----C----
Confidence 356888999995 777888888887542 2 2 2444443221 00 01 1
Q ss_pred ccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC----chhhc--cCCeEEECCC
Q 003029 439 VPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW 512 (856)
Q Consensus 439 ~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG----~~~~l--g~~g~lVnP~ 512 (856)
..|. +.+++++.++.++ ..||++|.. |-+.++.|||+|+ .|+|+....+ .++.+ ...|+++++.
T Consensus 68 ~~v~-~~~~~~~~~~l~~-~~ad~~I~~----~G~~t~~Ea~~~G----~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~ 137 (170)
T 2o6l_A 68 LNTR-LYKWIPQNDLLGH-PKTRAFITH----GGANGIYEAIYHG----IPMVGIPLFADQPDNIAHMKARGAAVRVDFN 137 (170)
T ss_dssp TTEE-EESSCCHHHHHTS-TTEEEEEEC----CCHHHHHHHHHHT----CCEEECCCSTTHHHHHHHHHTTTSEEECCTT
T ss_pred CcEE-EecCCCHHHHhcC-CCcCEEEEc----CCccHHHHHHHcC----CCEEeccchhhHHHHHHHHHHcCCeEEeccc
Confidence 1355 4788998776654 999999974 3358999999994 8888887742 23334 2468888876
Q ss_pred --CHHHHHHHHHHHHcCC
Q 003029 513 --NITEVANAIARALNMS 528 (856)
Q Consensus 513 --d~~~lA~ai~~aL~~~ 528 (856)
+.++++++|.++|+++
T Consensus 138 ~~~~~~l~~~i~~ll~~~ 155 (170)
T 2o6l_A 138 TMSSTDLLNALKRVINDP 155 (170)
T ss_dssp TCCHHHHHHHHHHHHHCH
T ss_pred cCCHHHHHHHHHHHHcCH
Confidence 8899999999999754
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.67 E-value=3.4e-05 Score=77.46 Aligned_cols=37 Identities=3% Similarity=-0.215 Sum_probs=32.9
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccc
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLM 812 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~ 812 (856)
.|+.+++++++++| ++++++++||| +.||++| ++.++
T Consensus 151 p~~~~~~~~~~~~~------i~~~~~i~iGD-~~nDi~~-a~~aG 187 (226)
T 1te2_A 151 PHPQVYLDCAAKLG------VDPLTCVALED-SVNGMIA-SKAAR 187 (226)
T ss_dssp TSTHHHHHHHHHHT------SCGGGEEEEES-SHHHHHH-HHHTT
T ss_pred CChHHHHHHHHHcC------CCHHHeEEEeC-CHHHHHH-HHHcC
Confidence 44999999999999 67899999999 9999999 77663
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.60 E-value=6.8e-06 Score=82.63 Aligned_cols=67 Identities=6% Similarity=-0.037 Sum_probs=46.3
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-----CccccCCHHH--HHHHHH
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS-----FLHYLRMKMC--MRFLSQ 839 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~-----~~~~l~~~~~--~~~~l~ 839 (856)
-.|+.+++.+++++| ++++++++||| +.||++| ++.++- ..+.+... +.|.+.+..+ +..+++
T Consensus 145 Kp~~~~~~~~~~~lg------i~~~~~i~iGD-~~nDi~~-a~~aG~--~~~~~~~~~~~~~a~~v~~~~~el~~~~~~~ 214 (221)
T 2wf7_A 145 KPAPDIFIAAAHAVG------VAPSESIGLED-SQAGIQA-IKDSGA--LPIGVGRPEDLGDDIVIVPDTSHYTLEFLKE 214 (221)
T ss_dssp TTSSHHHHHHHHHTT------CCGGGEEEEES-SHHHHHH-HHHHTC--EEEEESCHHHHCSSSEEESSGGGCCHHHHHH
T ss_pred CCChHHHHHHHHHcC------CChhHeEEEeC-CHHHHHH-HHHCCC--EEEEECCHHHhccccchhcCHHhCCHHHHHH
Confidence 345569999999999 67899999999 9999999 776632 12333321 2266677666 355555
Q ss_pred HHHH
Q 003029 840 NYLM 843 (856)
Q Consensus 840 ~~~~ 843 (856)
.++.
T Consensus 215 ~~~~ 218 (221)
T 2wf7_A 215 VWLQ 218 (221)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 5553
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.53 E-value=6.2e-05 Score=76.57 Aligned_cols=70 Identities=6% Similarity=-0.112 Sum_probs=48.8
Q ss_pred CCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC----------CccccCCHHHH
Q 003029 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS----------FLHYLRMKMCM 834 (856)
Q Consensus 765 ~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~----------~~~~l~~~~~~ 834 (856)
.+-.|..+++.+++++| ++++++++||| +.||+.| .+.++- .++.|... +.|.+.+..++
T Consensus 149 ~~Kp~~~~~~~~~~~~~------~~~~~~~~iGD-~~~Di~~-a~~aG~--~~~~~~~~~~~~~~~~~~~~~~~~~~~el 218 (232)
T 1zrn_A 149 VYKPDNRVYELAEQALG------LDRSAILFVAS-NAWDATG-ARYFGF--PTCWINRTGNVFEEMGQTPDWEVTSLRAV 218 (232)
T ss_dssp CCTTSHHHHHHHHHHHT------SCGGGEEEEES-CHHHHHH-HHHHTC--CEEEECTTCCCCCSSSCCCSEEESSHHHH
T ss_pred CCCCCHHHHHHHHHHcC------CCcccEEEEeC-CHHHHHH-HHHcCC--EEEEEcCCCCCccccCCCCCEEECCHHHH
Confidence 45567889999999999 67899999999 9999999 776642 23444221 12788999999
Q ss_pred HHHHHHHHHH
Q 003029 835 RFLSQNYLMM 844 (856)
Q Consensus 835 ~~~l~~~~~~ 844 (856)
..+|+++...
T Consensus 219 ~~~l~~~~~~ 228 (232)
T 1zrn_A 219 VELFETAAGK 228 (232)
T ss_dssp HTTC------
T ss_pred HHHHHhhccc
Confidence 8888776543
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00024 Score=73.60 Aligned_cols=70 Identities=10% Similarity=-0.109 Sum_probs=52.5
Q ss_pred CCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC----------------------
Q 003029 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS---------------------- 822 (856)
Q Consensus 765 ~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~---------------------- 822 (856)
.+-.|..++..+++++| ++++++++||| +.||+.| .+.++- .++.|..
T Consensus 145 ~~Kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~-a~~aG~--~~~~~~~~~~~~~~~~l~~g~~~~~~~~~ 214 (253)
T 1qq5_A 145 VFKPHPDSYALVEEVLG------VTPAEVLFVSS-NGFDVGG-AKNFGF--SVARVARLSQEALARELVSGTIAPLTMFK 214 (253)
T ss_dssp CCTTSHHHHHHHHHHHC------CCGGGEEEEES-CHHHHHH-HHHHTC--EEEEECCSCHHHHHHHTTSSSCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHcC------CCHHHEEEEeC-ChhhHHH-HHHCCC--EEEEECCcccchhhhhccccccccccccc
Confidence 34567889999999999 67899999999 9999999 776642 2344433
Q ss_pred -----C------CccccCCHHHHHHHHHHHHHH
Q 003029 823 -----S------FLHYLRMKMCMRFLSQNYLMM 844 (856)
Q Consensus 823 -----~------~~~~l~~~~~~~~~l~~~~~~ 844 (856)
. +.|.+.+..++..+|+++...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~ 247 (253)
T 1qq5_A 215 ALRMREETYAEAPDFVVPALGDLPRLVRGMAGA 247 (253)
T ss_dssp HHHSSCCTTSCCCSEEESSGGGHHHHHHHHC--
T ss_pred ccccccCCCCCCCCeeeCCHHHHHHHHHHhccc
Confidence 1 228889999999999877543
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0013 Score=72.53 Aligned_cols=137 Identities=10% Similarity=0.052 Sum_probs=87.3
Q ss_pred CceEEEeeccccc-------CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCC
Q 003029 363 RKVMLGVDRLDMI-------KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT 435 (856)
Q Consensus 363 ~~iIl~V~Rld~~-------KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~ 435 (856)
..+++++|++... +.+..+++|++.+ + +.++.+++ .++.. ++.. +..
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~----~~~~~~~g-----~~~~~----~l~~----~~~---- 264 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----D----VELIVAAP-----DTVAE----ALRA----EVP---- 264 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----T----CEEEEECC-----HHHHH----HHHH----HCT----
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC-----C----cEEEEEeC-----CCCHH----hhCC----CCC----
Confidence 4588899999875 5677788887542 2 23444432 12221 2221 111
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC----chhhc--cCCeEEE
Q 003029 436 LTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILV 509 (856)
Q Consensus 436 ~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG----~~~~l--g~~g~lV 509 (856)
.|. + +++++. .+|..||+||..+ | ..+++|||+|+ .|+|+....+ .++.+ ...|+++
T Consensus 265 ----~v~-~-~~~~~~---~~l~~~d~~v~~~---G-~~t~~Ea~~~G----~P~v~~p~~~dq~~~a~~~~~~g~g~~~ 327 (384)
T 2p6p_A 265 ----QAR-V-GWTPLD---VVAPTCDLLVHHA---G-GVSTLTGLSAG----VPQLLIPKGSVLEAPARRVADYGAAIAL 327 (384)
T ss_dssp ----TSE-E-ECCCHH---HHGGGCSEEEECS---C-TTHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHHTSEEEC
T ss_pred ----ceE-E-cCCCHH---HHHhhCCEEEeCC---c-HHHHHHHHHhC----CCEEEccCcccchHHHHHHHHCCCeEec
Confidence 244 4 777764 4679999999863 3 45789999994 8888887743 34434 2358888
Q ss_pred CCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 003029 510 NPW--NITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (856)
Q Consensus 510 nP~--d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~ 544 (856)
++. +.++++++|.++|+++ +.++++++..+.+.
T Consensus 328 ~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~ 362 (384)
T 2p6p_A 328 LPGEDSTEAIADSCQELQAKD--TYARRAQDLSREIS 362 (384)
T ss_dssp CTTCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHH
Confidence 875 7999999999999864 33344444444443
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00038 Score=70.53 Aligned_cols=58 Identities=10% Similarity=0.033 Sum_probs=41.5
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC---------ccccCCHHHHHHHH
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF---------LHYLRMKMCMRFLS 838 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~---------~~~l~~~~~~~~~l 838 (856)
.|..++.++++++| . +.+++||| +.+|..| .+.+ +++|.++... .|.+.+..++..+|
T Consensus 157 ~Kp~~~~~~~~~~~------~--~~~~~vGD-s~~Di~~-a~~a---g~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~l 223 (225)
T 1nnl_A 157 GKGKVIKLLKEKFH------F--KKIIMIGD-GATDMEA-CPPA---DAFIGFGGNVIRQQVKDNAKWYITDFVELLGEL 223 (225)
T ss_dssp HHHHHHHHHHHHHC------C--SCEEEEES-SHHHHTT-TTTS---SEEEEECSSCCCHHHHHHCSEEESCGGGGCC--
T ss_pred chHHHHHHHHHHcC------C--CcEEEEeC-cHHhHHH-HHhC---CeEEEecCccccHHHHhcCCeeecCHHHHHHHH
Confidence 58889999999987 3 68999999 9999998 5554 4577776431 26666666665544
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.41 E-value=5.2e-05 Score=79.70 Aligned_cols=67 Identities=7% Similarity=0.091 Sum_probs=50.5
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcc---cCc-----
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE---YNL----- 662 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~---l~l----- 662 (856)
.|+|+||+||||++.. ..+ +.++++|++|.+ .|+.|+++|||+......+... +++
T Consensus 1 ik~i~~D~DGtL~~~~--------------~~~-~~~~~~l~~l~~-~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~ 64 (263)
T 1zjj_A 1 MVAIIFDMDGVLYRGN--------------RAI-PGVRELIEFLKE-RGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSS 64 (263)
T ss_dssp CEEEEEECBTTTEETT--------------EEC-TTHHHHHHHHHH-HTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGG
T ss_pred CeEEEEeCcCceEeCC--------------EeC-ccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChh
Confidence 4799999999999752 223 689999999986 6999999999997665554443 343
Q ss_pred eEEeeCceEEE
Q 003029 663 WLAAENGMFLR 673 (856)
Q Consensus 663 gliaenG~~i~ 673 (856)
++++.||+.+.
T Consensus 65 ~i~~~~~~~~~ 75 (263)
T 1zjj_A 65 IIITSGLATRL 75 (263)
T ss_dssp GEEEHHHHHHH
T ss_pred hEEecHHHHHH
Confidence 57888887653
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.40 E-value=9.2e-06 Score=85.94 Aligned_cols=41 Identities=5% Similarity=-0.177 Sum_probs=36.1
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCC-------CcceEEEEecCCcccccccccccc
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKT-------AIDYVLCIGHFLGKNCNLPLQFLM 812 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~-------~~d~vla~GD~~~nDe~M~f~~~~ 812 (856)
..+..|+.++..+++++| + +++++++||| +.||++| ++.++
T Consensus 167 ~~~kp~~~~~~~~~~~lg------i~~~~~~~~~~~~i~~GD-s~nDi~~-a~~AG 214 (275)
T 2qlt_A 167 KQGKPHPEPYLKGRNGLG------FPINEQDPSKSKVVVFED-APAGIAA-GKAAG 214 (275)
T ss_dssp SSCTTSSHHHHHHHHHTT------CCCCSSCGGGSCEEEEES-SHHHHHH-HHHTT
T ss_pred CCCCCChHHHHHHHHHcC------CCccccCCCcceEEEEeC-CHHHHHH-HHHcC
Confidence 556789999999999999 5 6899999999 9999999 87764
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=97.40 E-value=5.9e-05 Score=79.65 Aligned_cols=72 Identities=14% Similarity=0.127 Sum_probs=47.0
Q ss_pred cCCeEEEEecCCccCCCCCCC-------CCCCcc----ccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCH---hhHH
Q 003029 589 SNNRLLILGFNATLTEPVDTP-------GRRGDQ----IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR---NVLD 654 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p-------~~~~~~----~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~---~~l~ 654 (856)
.++++|+||+||||++....- ...... .......+.|.++++|+.|.+ .|+.|+|+|||+. ..+.
T Consensus 57 ~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~-~Gi~i~iaTnr~~~~~~~~~ 135 (258)
T 2i33_A 57 EKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTES-KGVDIYYISNRKTNQLDATI 135 (258)
T ss_dssp SSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHH-TTCEEEEEEEEEGGGHHHHH
T ss_pred CCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCEEEEEcCCchhHHHHHH
Confidence 457899999999999862000 000000 000014577899999999986 7999999999994 4455
Q ss_pred HHhcccC
Q 003029 655 KNFQEYN 661 (856)
Q Consensus 655 ~~~~~l~ 661 (856)
..+..++
T Consensus 136 ~~L~~~G 142 (258)
T 2i33_A 136 KNLERVG 142 (258)
T ss_dssp HHHHHHT
T ss_pred HHHHHcC
Confidence 5555544
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00096 Score=72.45 Aligned_cols=44 Identities=11% Similarity=0.196 Sum_probs=36.5
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS 822 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~ 822 (856)
.|..++..++++++ ++++.+++||| +.||+.| .+.+ +++|.++.
T Consensus 246 pkp~~~~~~~~~lg------v~~~~~i~VGD-s~~Di~a-a~~A---G~~va~~~ 289 (317)
T 4eze_A 246 NKKQTLVDLAARLN------IATENIIACGD-GANDLPM-LEHA---GTGIAWKA 289 (317)
T ss_dssp HHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHH-HHHS---SEEEEESC
T ss_pred CCHHHHHHHHHHcC------CCcceEEEEeC-CHHHHHH-HHHC---CCeEEeCC
Confidence 57888999999998 67899999999 9999999 6655 56777743
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00031 Score=70.71 Aligned_cols=65 Identities=9% Similarity=-0.112 Sum_probs=48.1
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC--C---------CccccCCHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS--S---------FLHYLRMKM 832 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~--~---------~~~~l~~~~ 832 (856)
..+-.|..++.++++++| ++++++++||| +.||+.| .+.++-. +|.|.. . +.|.+.+..
T Consensus 134 ~~~Kp~p~~~~~~~~~lg------~~p~~~~~vgD-s~~Di~~-a~~aG~~--~i~v~~~~~~~~~l~~~~a~~v~~~~~ 203 (210)
T 2ah5_A 134 PEAPHKADVIHQALQTHQ------LAPEQAIIIGD-TKFDMLG-ARETGIQ--KLAITWGFGEQADLLNYQPDYIAHKPL 203 (210)
T ss_dssp SSCCSHHHHHHHHHHHTT------CCGGGEEEEES-SHHHHHH-HHHHTCE--EEEESSSSSCHHHHHTTCCSEEESSTT
T ss_pred CCCCCChHHHHHHHHHcC------CCcccEEEECC-CHHHHHH-HHHCCCc--EEEEcCCCCCHHHHHhCCCCEEECCHH
Confidence 556789999999999999 67899999999 9999999 7766432 445532 1 126677777
Q ss_pred HHHHHH
Q 003029 833 CMRFLS 838 (856)
Q Consensus 833 ~~~~~l 838 (856)
++..+|
T Consensus 204 el~~~l 209 (210)
T 2ah5_A 204 EVLAYF 209 (210)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 766543
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0012 Score=70.25 Aligned_cols=71 Identities=15% Similarity=0.206 Sum_probs=55.0
Q ss_pred HHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcc
Q 003029 580 ADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (856)
Q Consensus 580 ~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 659 (856)
......|.....++|++|+|+++..... ....+.|.+.++|+.|.+ .|+.++|+||++...+...+..
T Consensus 132 ~~~~~~~~~~g~~~i~~~~d~~~~~~~~-----------~~~~~~~g~~~~l~~L~~-~g~~~~i~T~~~~~~~~~~l~~ 199 (287)
T 3a1c_A 132 ELALEKLEREAKTAVIVARNGRVEGIIA-----------VSDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISRE 199 (287)
T ss_dssp HHHHHHHHHTTCEEEEEEETTEEEEEEE-----------EECCBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEE-----------eccccchhHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHH
Confidence 3455667767789999999999875310 134577899999999986 6999999999999888887776
Q ss_pred cCc
Q 003029 660 YNL 662 (856)
Q Consensus 660 l~l 662 (856)
+++
T Consensus 200 ~gl 202 (287)
T 3a1c_A 200 LNL 202 (287)
T ss_dssp HTC
T ss_pred hCC
Confidence 553
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0074 Score=65.59 Aligned_cols=67 Identities=9% Similarity=-0.021 Sum_probs=52.4
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-----Cc---cccCCHHHHHHHH
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS-----FL---HYLRMKMCMRFLS 838 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~-----~~---~~l~~~~~~~~~l 838 (856)
-.|+.++++++++++ ++++.+++||| +.||++| ++.+ +++|.+... .+ ....+-..+..+|
T Consensus 244 kpk~~~~~~~~~~lg------i~~~~~v~vGD-s~nDi~~-a~~a---G~~va~~~~~~~~~~a~~v~~~~~l~~v~~~L 312 (335)
T 3n28_A 244 QTKADILLTLAQQYD------VEIHNTVAVGD-GANDLVM-MAAA---GLGVAYHAKPKVEAKAQTAVRFAGLGGVVCIL 312 (335)
T ss_dssp HHHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHH-HHHS---SEEEEESCCHHHHTTSSEEESSSCTHHHHHHH
T ss_pred hhhHHHHHHHHHHcC------CChhhEEEEeC-CHHHHHH-HHHC---CCeEEeCCCHHHHhhCCEEEecCCHHHHHHHH
Confidence 479999999999999 67899999999 9999999 7765 556666322 12 5667778888888
Q ss_pred HHHHHH
Q 003029 839 QNYLMM 844 (856)
Q Consensus 839 ~~~~~~ 844 (856)
+..+..
T Consensus 313 ~~~l~~ 318 (335)
T 3n28_A 313 SAALVA 318 (335)
T ss_dssp HHHHHH
T ss_pred HhHHHH
Confidence 877643
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00028 Score=65.35 Aligned_cols=54 Identities=19% Similarity=0.147 Sum_probs=43.4
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
.|+|+||+||||... ..+.|.+.++|++|.+ .|..++|+|+++...++..+..+
T Consensus 2 ~k~i~~D~DgtL~~~---------------~~~~~~~~~~l~~L~~-~G~~~~i~S~~~~~~~~~~l~~~ 55 (137)
T 2pr7_A 2 MRGLIVDYAGVLDGT---------------DEDQRRWRNLLAAAKK-NGVGTVILSNDPGGLGAAPIREL 55 (137)
T ss_dssp CCEEEECSTTTTSSC---------------HHHHHHHHHHHHHHHH-TTCEEEEEECSCCGGGGHHHHHH
T ss_pred CcEEEEeccceecCC---------------CccCccHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHC
Confidence 578999999999432 3466889999999986 69999999999887766655543
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0045 Score=69.80 Aligned_cols=148 Identities=12% Similarity=0.008 Sum_probs=87.1
Q ss_pred CceEEEeeccccc-----CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003029 363 RKVMLGVDRLDMI-----KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (856)
Q Consensus 363 ~~iIl~V~Rld~~-----KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (856)
..++++.|++... |.+..+++|+..+ + +.++.++++. +.. .+. . ..
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~----~~~v~~~g~~-----~~~----~l~----~----~~--- 318 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----D----AEIIATFDAQ-----QLE----GVA----N----IP--- 318 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----S----SEEEECCCTT-----TTS----SCS----S----CC---
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----C----CEEEEEECCc-----chh----hhc----c----CC---
Confidence 3578889999864 8888889888643 2 2344333211 100 000 0 00
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC----chhhc--cCCeEEECC
Q 003029 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNP 511 (856)
Q Consensus 438 ~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG----~~~~l--g~~g~lVnP 511 (856)
..|. +.+++++.+ +|..||++|.. -| ..++.|+++|+ .|+|+..+.+ .++.+ ...|+++++
T Consensus 319 -~~v~-~~~~~~~~~---ll~~ad~~V~~---~G-~~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~ 385 (441)
T 2yjn_A 319 -DNVR-TVGFVPMHA---LLPTCAATVHH---GG-PGSWHTAAIHG----VPQVILPDGWDTGVRAQRTQEFGAGIALPV 385 (441)
T ss_dssp -SSEE-ECCSCCHHH---HGGGCSEEEEC---CC-HHHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHHTSEEECCT
T ss_pred -CCEE-EecCCCHHH---HHhhCCEEEEC---CC-HHHHHHHHHhC----CCEEEeCCcccHHHHHHHHHHcCCEEEccc
Confidence 1355 478888754 57999999973 34 56899999994 8899887743 33334 246888887
Q ss_pred C--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHH
Q 003029 512 W--NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (856)
Q Consensus 512 ~--d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (856)
. ++++++++|.++|+++ +.+.++.+...+.........-++
T Consensus 386 ~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 428 (441)
T 2yjn_A 386 PELTPDQLRESVKRVLDDP-AHRAGAARMRDDMLAEPSPAEVVG 428 (441)
T ss_dssp TTCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred ccCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHcCCCHHHHHH
Confidence 5 8999999999999864 344333333333334444444333
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00058 Score=72.28 Aligned_cols=58 Identities=10% Similarity=0.209 Sum_probs=47.3
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC---CCHhhHHHHhcccCc
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQEYNL 662 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~l~l 662 (856)
.++|+|+||+||||++.. .+.+.+.++|++|.+ .|+.|+++|| |+...+.+.+..+++
T Consensus 12 ~~~k~i~~D~DGtL~~~~---------------~~~~~~~~~l~~l~~-~g~~~~~~Tn~~~r~~~~~~~~l~~lg~ 72 (284)
T 2hx1_A 12 PKYKCIFFDAFGVLKTYN---------------GLLPGIENTFDYLKA-QGQDYYIVTNDASRSPEQLADSYHKLGL 72 (284)
T ss_dssp GGCSEEEECSBTTTEETT---------------EECTTHHHHHHHHHH-TTCEEEEEECCCSSCHHHHHHHHHHTTC
T ss_pred hcCCEEEEcCcCCcCcCC---------------eeChhHHHHHHHHHH-CCCEEEEEeCCCCcCHHHHHHHHHHCCc
Confidence 358999999999999762 245789999999986 7999999995 888888887777643
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0016 Score=77.67 Aligned_cols=72 Identities=15% Similarity=0.195 Sum_probs=56.0
Q ss_pred hHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhc
Q 003029 579 EADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (856)
Q Consensus 579 ~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 658 (856)
.....+.+.....+.+++.+||+++.... ...++.+++.++|++|.+ .|++++++||++.........
T Consensus 425 ~~~~~~~~~~~g~~~l~va~~~~~~G~i~-----------~~D~l~~~~~~~i~~L~~-~Gi~v~~~TGd~~~~a~~ia~ 492 (645)
T 3j08_A 425 VELALEKLEREAKTAVIVARNGRVEGIIA-----------VSDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISR 492 (645)
T ss_dssp HHHHHHHHHTTTCCCEEEEETTEEEEEEE-----------EECCCTTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEECCEEEEEEE-----------ecCCchhHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHH
Confidence 34445566667788899999999874321 234578899999999986 799999999999999888877
Q ss_pred ccCc
Q 003029 659 EYNL 662 (856)
Q Consensus 659 ~l~l 662 (856)
.+++
T Consensus 493 ~lgi 496 (645)
T 3j08_A 493 ELNL 496 (645)
T ss_dssp HHTC
T ss_pred HcCC
Confidence 7654
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0015 Score=73.52 Aligned_cols=45 Identities=9% Similarity=0.158 Sum_probs=37.4
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS 822 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~ 822 (856)
-.|..+++.+++++| ++++.+++||| +.||+.| .+.+ +++|.+..
T Consensus 322 kpk~~~~~~~~~~~g------i~~~~~i~vGD-~~~Di~~-a~~a---G~~va~~~ 366 (415)
T 3p96_A 322 AGKATALREFAQRAG------VPMAQTVAVGD-GANDIDM-LAAA---GLGIAFNA 366 (415)
T ss_dssp HHHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHH-HHHS---SEEEEESC
T ss_pred cchHHHHHHHHHHcC------cChhhEEEEEC-CHHHHHH-HHHC---CCeEEECC
Confidence 368899999999999 67899999999 9999999 6655 56777743
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0038 Score=68.80 Aligned_cols=106 Identities=16% Similarity=0.116 Sum_probs=68.7
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCC-----CCchhhc--cCCeEEECCC-
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-----AGAAQSL--GAGAILVNPW- 512 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~-----aG~~~~l--g~~g~lVnP~- 512 (856)
|. +.+++++. .++..||++|..| |. .+.+|+++++ .|+|+.-. .+.+..+ ...|+.+++.
T Consensus 283 v~-~~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G----~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~ 350 (402)
T 3ia7_A 283 VE-AHQWIPFH---SVLAHARACLTHG---TT-GAVLEAFAAG----VPLVLVPHFATEAAPSAERVIELGLGSVLRPDQ 350 (402)
T ss_dssp EE-EESCCCHH---HHHTTEEEEEECC---CH-HHHHHHHHTT----CCEEECGGGCGGGHHHHHHHHHTTSEEECCGGG
T ss_pred EE-EecCCCHH---HHHhhCCEEEECC---CH-HHHHHHHHhC----CCEEEeCCCcccHHHHHHHHHHcCCEEEccCCC
Confidence 55 46788776 8899999999776 32 5679999994 78885543 2344444 3458888876
Q ss_pred -CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 003029 513 -NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (856)
Q Consensus 513 -d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l 559 (856)
++++++++|.++|+++ +.+.++.+...+....+.+..-++.+.+.+
T Consensus 351 ~~~~~l~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 397 (402)
T 3ia7_A 351 LEPASIREAVERLAADS-AVRERVRRMQRDILSSGGPARAADEVEAYL 397 (402)
T ss_dssp CSHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHhhCChHHHHHHHHHHHH
Confidence 8999999999999864 233333333333334444455554444333
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.001 Score=66.88 Aligned_cols=67 Identities=13% Similarity=0.140 Sum_probs=45.0
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHh
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 657 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 657 (856)
+.+|+||||+||||++...... ...........+-|.+.++|+.|.+ .|..++|+||.+...+.+..
T Consensus 4 ~~~kav~fDlDGTL~d~~~~~~-~~~~~~~~~~~~~pg~~e~L~~L~~-~g~~~~i~T~~~~~~~~~~~ 70 (196)
T 2oda_A 4 PTFPALLFGLSGCLVDFGAQAA-TSDTPDDEHAQLTPGAQNALKALRD-QGMPCAWIDELPEALSTPLA 70 (196)
T ss_dssp -CCSCEEEETBTTTBCTTSTTT-SCSSCCGGGGSBCTTHHHHHHHHHH-HTCCEEEECCSCHHHHHHHH
T ss_pred CcCCEEEEcCCCceEecccccc-chhhcccccCCcCcCHHHHHHHHHH-CCCEEEEEcCChHHHHHHhc
Confidence 4578999999999997421110 0000001123567889999999986 69999999999887764433
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0027 Score=62.96 Aligned_cols=72 Identities=15% Similarity=0.163 Sum_probs=48.9
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCH---hhHHHHhcccCc
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR---NVLDKNFQEYNL 662 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~---~~l~~~~~~l~l 662 (856)
..|+|+||+||||+......-.......-....+.+.+.++|++|.+ .|..++|+|+.+. ..+...+..+++
T Consensus 2 ~ik~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~-~g~~~~i~Tn~~~~~~~~~~~~l~~~gl 76 (189)
T 3ib6_A 2 SLTHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQ-LGFKQAILSNTATSDTEVIKRVLTNFGI 76 (189)
T ss_dssp -CCEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHH-TTCEEEEEECCSSCCHHHHHHHHHHTTC
T ss_pred CceEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHH-CCCEEEEEECCCccchHHHHHHHHhcCc
Confidence 46899999999998742210000000000134678899999999987 6999999999876 677777776653
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.015 Score=64.66 Aligned_cols=105 Identities=10% Similarity=-0.047 Sum_probs=68.0
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC----chhhc--cCCeEEECCC--
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG----~~~~l--g~~g~lVnP~-- 512 (856)
|.+ .+++++. .++..||++|..+ |. .+..|+++++ .|+|+--..+ .+..+ ...|+.+++.
T Consensus 299 v~~-~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G----~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~ 366 (415)
T 3rsc_A 299 VEA-HRWVPHV---KVLEQATVCVTHG---GM-GTLMEALYWG----RPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKA 366 (415)
T ss_dssp EEE-ESCCCHH---HHHHHEEEEEESC---CH-HHHHHHHHTT----CCEEECCCSGGGHHHHHHHHHHTCEEECCGGGC
T ss_pred EEE-EecCCHH---HHHhhCCEEEECC---cH-HHHHHHHHhC----CCEEEeCCcchHHHHHHHHHHcCCEEEcccCCC
Confidence 554 6788865 7888999999775 33 4679999994 7888744332 34444 2357888775
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 003029 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSE 558 (856)
Q Consensus 513 d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~ 558 (856)
++++++++|.++|+++ +.+..+.+...+......+...++.+.+.
T Consensus 367 ~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 411 (415)
T 3rsc_A 367 DGDTLLAAVGAVAADP-ALLARVEAMRGHVRRAGGAARAADAVEAY 411 (415)
T ss_dssp CHHHHHHHHHHHHTCH-HHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 8999999999999864 34433333333344445555555544433
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0071 Score=67.02 Aligned_cols=150 Identities=9% Similarity=0.001 Sum_probs=88.2
Q ss_pred CCceEEEeeccccc-CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 003029 362 GRKVMLGVDRLDMI-KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (856)
Q Consensus 362 ~~~iIl~V~Rld~~-KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~p 440 (856)
...+++++|++... |+...+..+++.+.+ . + +.+++++++. +.. .+. .+ ...
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~-~-~----~~~v~~~g~~--~~~-------~l~----~~--------~~~ 284 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGE-V-D----ADFVLALGDL--DIS-------PLG----TL--------PRN 284 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHT-S-S----SEEEEECTTS--CCG-------GGC----SC--------CTT
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHc-C-C----CEEEEEECCc--Chh-------hhc----cC--------CCc
Confidence 35678889999655 355544444444432 2 2 3355555332 100 111 00 013
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEE----eCCCCch--hhc--cCCeEEECCC
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLIL----SEFAGAA--QSL--GAGAILVNPW 512 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVl----Se~aG~~--~~l--g~~g~lVnP~ 512 (856)
|.+ .++++.. .++..||+||.. |-..+..|||+|+ .|+|+ .+-.+.+ +.+ ...|+++++.
T Consensus 285 v~~-~~~~~~~---~ll~~ad~~v~~----~G~~t~~Eal~~G----~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~ 352 (398)
T 3oti_A 285 VRA-VGWTPLH---TLLRTCTAVVHH----GGGGTVMTAIDAG----IPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSD 352 (398)
T ss_dssp EEE-ESSCCHH---HHHTTCSEEEEC----CCHHHHHHHHHHT----CCEEECCCTTCCSSCTTHHHHHHHTSEEECCGG
T ss_pred EEE-EccCCHH---HHHhhCCEEEEC----CCHHHHHHHHHhC----CCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCC
Confidence 554 6777654 567789999953 4446889999994 78888 5556666 666 3468888876
Q ss_pred --CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 003029 513 --NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETF 555 (856)
Q Consensus 513 --d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~f 555 (856)
+.+.++ ++|++ ++.|.++.+...+......+...++.+
T Consensus 353 ~~~~~~l~----~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l 392 (398)
T 3oti_A 353 KVDADLLR----RLIGD-ESLRTAAREVREEMVALPTPAETVRRI 392 (398)
T ss_dssp GCCHHHHH----HHHHC-HHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred CCCHHHHH----HHHcC-HHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 555555 77775 335555555555555666666655544
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0095 Score=71.89 Aligned_cols=72 Identities=15% Similarity=0.195 Sum_probs=56.7
Q ss_pred hHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhc
Q 003029 579 EADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (856)
Q Consensus 579 ~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 658 (856)
.....+.+.....+.+++.+||+++.... ...++.+++.++|++|.+ .|+.++++||+..........
T Consensus 503 ~~~~~~~~~~~g~~~~~va~~~~~~G~i~-----------i~D~~~~~~~~~i~~l~~-~Gi~v~~~TGd~~~~a~~ia~ 570 (723)
T 3j09_A 503 VELALEKLEREAKTAVIVARNGRVEGIIA-----------VSDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISR 570 (723)
T ss_dssp HHHHHHHHHTTTCEEEEEEETTEEEEEEE-----------EECCSCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEECCEEEEEEe-----------ecCCcchhHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHH
Confidence 44455667777889999999999875321 234578899999999986 799999999999998888777
Q ss_pred ccCc
Q 003029 659 EYNL 662 (856)
Q Consensus 659 ~l~l 662 (856)
.+++
T Consensus 571 ~lgi 574 (723)
T 3j09_A 571 ELNL 574 (723)
T ss_dssp HHTC
T ss_pred HcCC
Confidence 7654
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.003 Score=76.21 Aligned_cols=71 Identities=8% Similarity=0.173 Sum_probs=56.6
Q ss_pred HHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcc
Q 003029 580 ADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (856)
Q Consensus 580 ~~~~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 659 (856)
....+.|.....+.+++.+||+++..-. ...++.++++++|++|.+ .|++|+++|||...........
T Consensus 523 ~~~~~~~~~~G~~vl~va~d~~~~G~i~-----------i~D~i~~~~~~aI~~L~~-~Gi~v~mlTGd~~~~a~~ia~~ 590 (736)
T 3rfu_A 523 FEKADELRGKGASVMFMAVDGKTVALLV-----------VEDPIKSSTPETILELQQ-SGIEIVMLTGDSKRTAEAVAGT 590 (736)
T ss_dssp HHHHHHHHHTTCEEEEEEETTEEEEEEE-----------EECCBCSSHHHHHHHHHH-HTCEEEEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEECCEEEEEEE-----------eeccchhhHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHH
Confidence 3445667777899999999999875311 133578899999999986 6999999999999999888877
Q ss_pred cCc
Q 003029 660 YNL 662 (856)
Q Consensus 660 l~l 662 (856)
+++
T Consensus 591 lgi 593 (736)
T 3rfu_A 591 LGI 593 (736)
T ss_dssp HTC
T ss_pred cCC
Confidence 764
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0014 Score=65.92 Aligned_cols=74 Identities=7% Similarity=-0.109 Sum_probs=56.0
Q ss_pred eCC--CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC--C-------------Ccc
Q 003029 764 AVG--VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS--S-------------FLH 826 (856)
Q Consensus 764 p~g--vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~--~-------------~~~ 826 (856)
+.+ .+|+.+++++++++| ++++++++||| +.||++| ++.++- .+|.+.+ . +.|
T Consensus 138 ~~~~~kpk~~~~~~~~~~l~------~~~~~~i~iGD-~~~Di~~-a~~aG~--~~i~~~~~~~~~~~~~~~l~~~~ad~ 207 (229)
T 2fdr_A 138 GADRVKPKPDIFLHGAAQFG------VSPDRVVVVED-SVHGIHG-ARAAGM--RVIGFTGASHTYPSHADRLTDAGAET 207 (229)
T ss_dssp CTTCCTTSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHH-HHHTTC--EEEEECCSTTCCTTHHHHHHHHTCSE
T ss_pred ccCCCCcCHHHHHHHHHHcC------CChhHeEEEcC-CHHHHHH-HHHCCC--EEEEEecCCccchhhhHHHhhcCCce
Confidence 667 899999999999999 67899999999 9999999 776632 1366643 2 238
Q ss_pred ccCCHHHHHHHHHHHHHHHHh
Q 003029 827 YLRMKMCMRFLSQNYLMMARA 847 (856)
Q Consensus 827 ~l~~~~~~~~~l~~~~~~~~~ 847 (856)
.+.+..++..+|+++..-..|
T Consensus 208 v~~~~~el~~~l~~~~~~~~~ 228 (229)
T 2fdr_A 208 VISRMQDLPAVIAAMAEWEGA 228 (229)
T ss_dssp EESCGGGHHHHHHHHTC----
T ss_pred eecCHHHHHHHHHHhhhhhcc
Confidence 888999998888877443333
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0043 Score=61.02 Aligned_cols=72 Identities=17% Similarity=0.196 Sum_probs=48.7
Q ss_pred HhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCC---------------CHh
Q 003029 587 LRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS---------------DRN 651 (856)
Q Consensus 587 ~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR---------------~~~ 651 (856)
..+..|+++||.||||+...... .. .......++.|.+.++|++|.+ .|..++|+|+. ...
T Consensus 10 ~~~~~k~~~~D~Dgtl~~~~~~~--~~-~~~~~~~~~~pg~~e~L~~L~~-~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~ 85 (176)
T 2fpr_A 10 HGSSQKYLFIDRDGTLISEPPSD--FQ-VDRFDKLAFEPGVIPQLLKLQK-AGYKLVMITNQDGLGTQSFPQADFDGPHN 85 (176)
T ss_dssp ---CCEEEEECSBTTTBCCC--C--CC-CCSGGGCCBCTTHHHHHHHHHH-TTEEEEEEEECTTTTBTTBCHHHHHHHHH
T ss_pred cCCcCcEEEEeCCCCeEcCCCCC--cC-cCCHHHCcCCccHHHHHHHHHH-CCCEEEEEECCccccccccchHhhhhhHH
Confidence 34789999999999999763100 00 0011245678899999999986 69999999998 455
Q ss_pred hHHHHhcccCc
Q 003029 652 VLDKNFQEYNL 662 (856)
Q Consensus 652 ~l~~~~~~l~l 662 (856)
.+...+..+++
T Consensus 86 ~~~~~l~~~gl 96 (176)
T 2fpr_A 86 LMMQIFTSQGV 96 (176)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 56666666554
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=95.90 E-value=0.0033 Score=65.09 Aligned_cols=71 Identities=10% Similarity=-0.093 Sum_probs=54.1
Q ss_pred EeCCCCHHHHHHHHHHHhCcCCcCCCCc-ceEEEEecCCcccccccccccccCcceEEeCCC------------------
Q 003029 763 RAVGVTKGAAIDRILAEIVHSKKMKTAI-DYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS------------------ 823 (856)
Q Consensus 763 ~p~gvnKG~av~~ll~~l~~~~~~~~~~-d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~------------------ 823 (856)
.+.+.+|+.++..+++++| +++ +++++||| +.||++| ++.++-..+.|.-++.
T Consensus 156 ~~~~kp~~~~~~~~~~~lg------i~~~~~~i~iGD-~~nDi~~-a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~ 227 (267)
T 1swv_A 156 VPAGRPYPWMCYKNAMELG------VYPMNHMIKVGD-TVSDMKE-GRNAGMWTVGVILGSSELGLTEEEVENMDSVELR 227 (267)
T ss_dssp SSCCTTSSHHHHHHHHHHT------CCSGGGEEEEES-SHHHHHH-HHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHH
T ss_pred cCCCCCCHHHHHHHHHHhC------CCCCcCEEEEeC-CHHHHHH-HHHCCCEEEEEcCCCCccCccHHHHhhchhhhhh
Confidence 3567889999999999999 567 89999999 9999999 8877532233332322
Q ss_pred --------------CccccCCHHHHHHHHHHH
Q 003029 824 --------------FLHYLRMKMCMRFLSQNY 841 (856)
Q Consensus 824 --------------~~~~l~~~~~~~~~l~~~ 841 (856)
+.|.+.+..++..+|+.+
T Consensus 228 ~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~~ 259 (267)
T 1swv_A 228 EKIEVVRNRFVENGAHFTIETMQELESVMEHI 259 (267)
T ss_dssp HHHHHHHHHHHHTTCSEEESSGGGHHHHHHHH
T ss_pred hhhhhHHHHHHhcCCceeccCHHHHHHHHHHH
Confidence 227888999988888665
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=95.89 E-value=0.0021 Score=65.42 Aligned_cols=60 Identities=8% Similarity=-0.004 Sum_probs=36.3
Q ss_pred CCeEEEEecCCccCCCCCCC--------CCCCccc-c-----------ccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 003029 590 NNRLLILGFNATLTEPVDTP--------GRRGDQI-R-----------EMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p--------~~~~~~~-~-----------~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 649 (856)
..|+|+||+||||++..... ....... . .....+.+.+.+.|+.|.+ .|+.++|+|+++
T Consensus 36 ~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~-~G~~l~ivTn~~ 114 (211)
T 2b82_A 36 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVR-RGDAIFFVTGRS 114 (211)
T ss_dssp CCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHH-HTCEEEEEECSC
T ss_pred CCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHH-CCCEEEEEcCCc
Confidence 57999999999999852100 0000000 0 0001234577888888875 588888888886
Q ss_pred H
Q 003029 650 R 650 (856)
Q Consensus 650 ~ 650 (856)
.
T Consensus 115 ~ 115 (211)
T 2b82_A 115 P 115 (211)
T ss_dssp C
T ss_pred H
Confidence 4
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=95.88 E-value=0.27 Score=54.57 Aligned_cols=136 Identities=11% Similarity=0.042 Sum_probs=81.8
Q ss_pred CCceEEEeeccc-ccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 003029 362 GRKVMLGVDRLD-MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (856)
Q Consensus 362 ~~~iIl~V~Rld-~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~p 440 (856)
...|+++.|++. +.+.+...++|++.+ +++ ++.++++.... ..+ . ...
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~----vv~~~g~~~~~----------------~~~----~--~~~ 269 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRR----VVLSSGWAGLG----------------RID----E--GDD 269 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCC----EEEECTTTTCC----------------CSS----C--CTT
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCE----EEEEeCCcccc----------------ccc----C--CCC
Confidence 456778899998 666677777777653 222 33333221100 000 0 113
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCc----hhhc--cCCeEEECCC--
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA----AQSL--GAGAILVNPW-- 512 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~----~~~l--g~~g~lVnP~-- 512 (856)
|.+ .+++++.+ ++..||++|..+ |. .+..|+++++ .|+|+--+.|- +..+ ...|+.+++.
T Consensus 270 v~~-~~~~~~~~---ll~~~d~~v~~g---G~-~t~~Eal~~G----vP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~ 337 (404)
T 3h4t_A 270 CLV-VGEVNHQV---LFGRVAAVVHHG---GA-GTTTAVTRAG----APQVVVPQKADQPYYAGRVADLGVGVAHDGPTP 337 (404)
T ss_dssp EEE-ESSCCHHH---HGGGSSEEEECC---CH-HHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSC
T ss_pred EEE-ecCCCHHH---HHhhCcEEEECC---cH-HHHHHHHHcC----CCEEEcCCcccHHHHHHHHHHCCCEeccCcCCC
Confidence 554 57888755 557899999655 33 5678999994 78887765442 1112 1347777653
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 003029 513 NITEVANAIARALNMSPEEREKRHWHNFTHV 543 (856)
Q Consensus 513 d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v 543 (856)
+.++++++|.++|+ + +.++++++..+.+
T Consensus 338 ~~~~l~~ai~~ll~--~-~~~~~~~~~~~~~ 365 (404)
T 3h4t_A 338 TVESLSAALATALT--P-GIRARAAAVAGTI 365 (404)
T ss_dssp CHHHHHHHHHHHTS--H-HHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHhC--H-HHHHHHHHHHHHH
Confidence 78999999999997 3 3344444443333
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.86 E-value=0.003 Score=66.32 Aligned_cols=73 Identities=7% Similarity=0.081 Sum_probs=49.0
Q ss_pred cCCeEEEEecCCccCCCCCCC-------CCCCc-----cccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHh----h
Q 003029 589 SNNRLLILGFNATLTEPVDTP-------GRRGD-----QIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN----V 652 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p-------~~~~~-----~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~----~ 652 (856)
.++.+|+||+||||++....- ..+.. -.......+-|.+++.|+.|.+ .|+.|+|+|||+.. .
T Consensus 56 g~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~-~G~~i~ivTgR~~~~~r~~ 134 (260)
T 3pct_A 56 GKKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNA-NGGTMFFVSNRRDDVEKAG 134 (260)
T ss_dssp --CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHH-TTCEEEEEEEEETTTSHHH
T ss_pred CCCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHH-CCCeEEEEeCCCccccHHH
Confidence 455799999999999873100 00000 0011234567789999999986 69999999999754 6
Q ss_pred HHHHhcccCc
Q 003029 653 LDKNFQEYNL 662 (856)
Q Consensus 653 l~~~~~~l~l 662 (856)
...++..+++
T Consensus 135 T~~~L~~lGi 144 (260)
T 3pct_A 135 TVDDMKRLGF 144 (260)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHcCc
Confidence 6777777654
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.62 E-value=0.0045 Score=65.13 Aligned_cols=73 Identities=5% Similarity=0.064 Sum_probs=49.8
Q ss_pred cCCeEEEEecCCccCCCCCC-------CCCCCc-----cccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCH----hh
Q 003029 589 SNNRLLILGFNATLTEPVDT-------PGRRGD-----QIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR----NV 652 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~-------p~~~~~-----~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~----~~ 652 (856)
.++.+|+||+||||++...- ...+.. -.......+-|.+++.|+.|.+ .|+.|+|+|||+. ..
T Consensus 56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~~-~G~ki~ivTgR~~~~~r~~ 134 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNS-HNGKVFYVTNRKDSTEKSG 134 (262)
T ss_dssp TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHHH-TTEEEEEEEEEETTTTHHH
T ss_pred CCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHHH-CCCeEEEEeCCCccchHHH
Confidence 45679999999999987410 000000 0011234566789999999986 6999999999976 46
Q ss_pred HHHHhcccCc
Q 003029 653 LDKNFQEYNL 662 (856)
Q Consensus 653 l~~~~~~l~l 662 (856)
...++..+++
T Consensus 135 T~~~L~~lGi 144 (262)
T 3ocu_A 135 TIDDMKRLGF 144 (262)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHcCc
Confidence 6677777664
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=95.53 E-value=0.3 Score=58.85 Aligned_cols=173 Identities=14% Similarity=0.107 Sum_probs=110.8
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEE
Q 003029 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (856)
Q Consensus 364 ~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 443 (856)
.++.+.-++ .|=-+..+..+.++|++.|+-+ |++...+. ..-..+ .+.+.+ +|- +-..|+|
T Consensus 524 v~f~~fN~~--~Ki~p~~~~~W~~IL~~vP~S~----L~Ll~~~~----~~~~~l----~~~~~~----~gi-~~~r~~f 584 (723)
T 4gyw_A 524 IVYCNFNQL--YKIDPSTLQMWANILKRVPNSV----LWLLRFPA----VGEPNI----QQYAQN----MGL-PQNRIIF 584 (723)
T ss_dssp EEEECCSCG--GGCCHHHHHHHHHHHHHCSSEE----EEEEETTG----GGHHHH----HHHHHH----TTC-CGGGEEE
T ss_pred EEEEeCCcc--ccCCHHHHHHHHHHHHhCCCCe----EEEEeCcH----HHHHHH----HHHHHh----cCC-CcCeEEE
Confidence 334445454 4557899999999999999854 66665432 111223 333332 232 1124665
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC-chh-----hc---cCCeEEECCCCH
Q 003029 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG-AAQ-----SL---GAGAILVNPWNI 514 (856)
Q Consensus 444 ~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG-~~~-----~l---g~~g~lVnP~d~ 514 (856)
.+..+.++..+.|+.+||+|-|--+-| +.+..||+.+ |++|+|--+. .+. .+ |-.-++ -.|.
T Consensus 585 -~~~~~~~~~l~~~~~~Di~LDt~p~~g-~tT~~eal~~-----GvPvvt~~g~~~~sR~~~s~l~~~gl~e~i--a~~~ 655 (723)
T 4gyw_A 585 -SPVAPKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWA-----GTPMVTMPGETLASRVAASQLTCLGCLELI--AKNR 655 (723)
T ss_dssp -EECCCHHHHHHHGGGCSEEECCSSSCC-SHHHHHHHHT-----TCCEEBCCCSSGGGTHHHHHHHHHTCGGGB--CSSH
T ss_pred -CCCCCHHHHHHHhCCCeEEeCCCCcCC-HHHHHHHHHc-----CCCEEEccCCCccHhHHHHHHHHcCCcccc--cCCH
Confidence 667899999999999999999999877 7889999999 5666663321 111 11 222222 2567
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHhHHh
Q 003029 515 TEVANAIARALNMSPEEREKRHWHNFTHVTT---HTAQEWAETFVSELNDTVVE 565 (856)
Q Consensus 515 ~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~---~~~~~W~~~fl~~l~~~~~~ 565 (856)
++..+.-.++-+++ +.+....+++++...+ +|...|++.|-..+.+.+..
T Consensus 656 ~~Y~~~a~~la~d~-~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r 708 (723)
T 4gyw_A 656 QEYEDIAVKLGTDL-EYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEH 708 (723)
T ss_dssp HHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCH-HHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHH
Confidence 77666656665654 3555555556665544 68899999998888887754
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=95.31 E-value=0.0061 Score=60.49 Aligned_cols=31 Identities=6% Similarity=0.058 Sum_probs=20.7
Q ss_pred CCChhHHHHHHHhhcCC-CCeEEEEcCCCHhhH
Q 003029 622 KLHPDLKQPLNALCHDP-KTTIVVLSGSDRNVL 653 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~-g~~V~I~SGR~~~~l 653 (856)
.+.|.+.++|++|.+ . |..++|+|+++...+
T Consensus 73 ~~~~g~~e~L~~L~~-~~g~~~~ivT~~~~~~~ 104 (193)
T 2i7d_A 73 EPIPGALDAVREMND-LPDTQVFICTSPLLKYH 104 (193)
T ss_dssp CBCTTHHHHHHHHHT-STTEEEEEEECCCSSCT
T ss_pred ccCcCHHHHHHHHHh-CCCCeEEEEeCCChhhH
Confidence 455677777777764 4 677777777765433
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=95.20 E-value=0.11 Score=57.94 Aligned_cols=122 Identities=12% Similarity=0.024 Sum_probs=77.9
Q ss_pred CCceEEEeecc-cccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 003029 362 GRKVMLGVDRL-DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (856)
Q Consensus 362 ~~~iIl~V~Rl-d~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~p 440 (856)
...++++.|++ ++.|.+..+++|++.+ + .+ ++.+.++. + .+ . ..+. ..
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~----~-~~----~v~~~g~~--~-~~-------~----~~~~--------~~ 286 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH----G-RR----VILSRGWA--D-LV-------L----PDDG--------AD 286 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT----T-CC----EEECTTCT--T-CC-------C----SSCG--------GG
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC----C-Ce----EEEEeCCC--c-cc-------c----cCCC--------CC
Confidence 35688889999 6888888888888754 2 22 33332211 1 00 0 0000 12
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC----chhhc--cCCeEEECCC--
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG----~~~~l--g~~g~lVnP~-- 512 (856)
+. +.+++++.++ +..||+||..+ |. .++.||++++ .|+|+....+ .+..+ ...|+.+++.
T Consensus 287 v~-~~~~~~~~~~---l~~~d~~v~~~---G~-~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~ 354 (415)
T 1iir_A 287 CF-AIGEVNHQVL---FGRVAAVIHHG---GA-GTTHVAARAG----APQILLPQMADQPYYAGRVAELGVGVAHDGPIP 354 (415)
T ss_dssp EE-ECSSCCHHHH---GGGSSEEEECC---CH-HHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSC
T ss_pred EE-EeCcCChHHH---HhhCCEEEeCC---Ch-hHHHHHHHcC----CCEEECCCCCccHHHHHHHHHCCCcccCCcCCC
Confidence 54 4788988654 69999999753 44 6899999994 7888876654 33333 2357888764
Q ss_pred CHHHHHHHHHHHHcC
Q 003029 513 NITEVANAIARALNM 527 (856)
Q Consensus 513 d~~~lA~ai~~aL~~ 527 (856)
+.++++++|.++ ++
T Consensus 355 ~~~~l~~~i~~l-~~ 368 (415)
T 1iir_A 355 TFDSLSAALATA-LT 368 (415)
T ss_dssp CHHHHHHHHHHH-TS
T ss_pred CHHHHHHHHHHH-cC
Confidence 889999999999 65
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.09 E-value=0.012 Score=60.91 Aligned_cols=72 Identities=7% Similarity=-0.164 Sum_probs=57.3
Q ss_pred EeCCCCHHHHHHHHHHHhCcCCcCCCCc-ceEEEEecCCcccccccccccccCcceEEeCCC------------------
Q 003029 763 RAVGVTKGAAIDRILAEIVHSKKMKTAI-DYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS------------------ 823 (856)
Q Consensus 763 ~p~gvnKG~av~~ll~~l~~~~~~~~~~-d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~------------------ 823 (856)
.+.+..|+.+++.+++++| +++ +++++||| +.||++| .+.++-. +|.|...
T Consensus 164 ~~~~kp~~~~~~~~~~~lg------i~~~~~~i~vGD-~~~Di~~-a~~aG~~--~v~v~~g~~~~~~~~~~~~~~~~~~ 233 (277)
T 3iru_A 164 VVRGRPFPDMALKVALELE------VGHVNGCIKVDD-TLPGIEE-GLRAGMW--TVGVSCSGNEVGLDREDWQALSSDE 233 (277)
T ss_dssp SSSCTTSSHHHHHHHHHHT------CSCGGGEEEEES-SHHHHHH-HHHTTCE--EEEECSSSTTTCCCHHHHHHSCHHH
T ss_pred cCCCCCCHHHHHHHHHHcC------CCCCccEEEEcC-CHHHHHH-HHHCCCe--EEEEecCCcccccchhhhhhcchhh
Confidence 4667889999999999999 678 99999999 9999999 7776432 4455322
Q ss_pred ----------------CccccCCHHHHHHHHHHHHHH
Q 003029 824 ----------------FLHYLRMKMCMRFLSQNYLMM 844 (856)
Q Consensus 824 ----------------~~~~l~~~~~~~~~l~~~~~~ 844 (856)
+.|-+.+..++..+|+++-..
T Consensus 234 ~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~~ 270 (277)
T 3iru_A 234 QQSYRQHAEQRLFNAGAHYVIDSVADLETVITDVNRR 270 (277)
T ss_dssp HHHHHHHHHHHHHHHTCSEEESSGGGTHHHHHHHHHH
T ss_pred hhhhhhhhHHHHhhCCCCEEecCHHHHHHHHHHHHHH
Confidence 238899999999999887653
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=95.04 E-value=0.06 Score=67.54 Aligned_cols=40 Identities=3% Similarity=-0.021 Sum_probs=35.3
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 621 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
.++.++++++|++|.+ .|+.|+++|||...........++
T Consensus 603 Dp~r~~~~~aI~~l~~-aGI~vvmiTGd~~~tA~~ia~~lg 642 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRT-AGIRVIMVTGDHPITAKAIAASVG 642 (1034)
T ss_pred CCCchhHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcC
Confidence 3578899999999986 799999999999999988887765
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=94.90 E-value=0.015 Score=65.46 Aligned_cols=58 Identities=12% Similarity=0.147 Sum_probs=39.8
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 649 (856)
...|+++||+||||+...... ..... ...-..+.+.+.++|+.|.+ .|+.++|+|+++
T Consensus 56 ~~~k~v~fD~DGTL~~~~~~~-~~~~~-~~~~~~~~pgv~e~L~~L~~-~G~~l~IvTN~~ 113 (416)
T 3zvl_A 56 PQGKVAAFDLDGTLITTRSGK-VFPTS-PSDWRILYPEIPKKLQELAA-EGYKLVIFTNQM 113 (416)
T ss_dssp CCSSEEEECSBTTTEECSSCS-SSCSS-TTCCEESCTTHHHHHHHHHH-TTCEEEEEEECH
T ss_pred CCCeEEEEeCCCCccccCCCc-cCCCC-HHHhhhhcccHHHHHHHHHH-CCCeEEEEeCCc
Confidence 357899999999998652100 00000 00112367899999999986 699999999976
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=94.85 E-value=0.013 Score=59.40 Aligned_cols=68 Identities=6% Similarity=-0.231 Sum_probs=52.2
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC---------------C-Cccc
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS---------------S-FLHY 827 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~---------------~-~~~~ 827 (856)
..+-.|+.+++.+++++| ++++++++||| +.||++| .+.++- -++.|.. . +.|.
T Consensus 166 ~~~kp~~~~~~~~~~~lg------i~~~~~~~iGD-~~~Di~~-a~~aG~--~~~~~~~~~~~g~~~~~~~~~~~~~d~~ 235 (254)
T 3umg_A 166 RKYKPDPQAYLRTAQVLG------LHPGEVMLAAA-HNGDLEA-AHATGL--ATAFILRPVEHGPHQTDDLAPTGSWDIS 235 (254)
T ss_dssp TCCTTSHHHHHHHHHHTT------CCGGGEEEEES-CHHHHHH-HHHTTC--EEEEECCTTTTCTTCCSCSSCSSCCSEE
T ss_pred CCCCCCHHHHHHHHHHcC------CChHHEEEEeC-ChHhHHH-HHHCCC--EEEEEecCCcCCCCccccccccCCCceE
Confidence 456678999999999999 67899999999 9999999 776642 2344431 1 1288
Q ss_pred cCCHHHHHHHHHHH
Q 003029 828 LRMKMCMRFLSQNY 841 (856)
Q Consensus 828 l~~~~~~~~~l~~~ 841 (856)
+.+..++..+|...
T Consensus 236 ~~~~~el~~~l~~~ 249 (254)
T 3umg_A 236 ATDITDLAAQLRAG 249 (254)
T ss_dssp ESSHHHHHHHHHHC
T ss_pred ECCHHHHHHHhcCC
Confidence 89999988887653
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=94.79 E-value=0.034 Score=55.56 Aligned_cols=66 Identities=3% Similarity=-0.127 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC----------CccccCCHHHHHH
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS----------FLHYLRMKMCMRF 836 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~----------~~~~l~~~~~~~~ 836 (856)
-.|+.+++.+++++| ++++++++||| +.||++| .+.++- .++.|... +.|.+.+..++..
T Consensus 152 kp~~~~~~~~~~~~~------~~~~~~~~iGD-~~~Di~~-a~~aG~--~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~ 221 (230)
T 3um9_A 152 KPHQKVYELAMDTLH------LGESEILFVSC-NSWDATG-AKYFGY--PVCWINRSNGVFDQLGVVPDIVVSDVGVLAS 221 (230)
T ss_dssp TTCHHHHHHHHHHHT------CCGGGEEEEES-CHHHHHH-HHHHTC--CEEEECTTSCCCCCSSCCCSEEESSHHHHHH
T ss_pred CCChHHHHHHHHHhC------CCcccEEEEeC-CHHHHHH-HHHCCC--EEEEEeCCCCccccccCCCcEEeCCHHHHHH
Confidence 356788899999999 67899999999 9999999 776642 24444211 1288999998888
Q ss_pred HHHHHH
Q 003029 837 LSQNYL 842 (856)
Q Consensus 837 ~l~~~~ 842 (856)
+|+++-
T Consensus 222 ~l~~~~ 227 (230)
T 3um9_A 222 RFSPVD 227 (230)
T ss_dssp TCCC--
T ss_pred HHHHhh
Confidence 776553
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=94.68 E-value=0.012 Score=57.27 Aligned_cols=63 Identities=16% Similarity=0.027 Sum_probs=49.1
Q ss_pred CCCH--HHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcc-eEEeCCC--Cc-cccCCHHHHHHHHH
Q 003029 766 GVTK--GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIS-TVRLDSS--FL-HYLRMKMCMRFLSQ 839 (856)
Q Consensus 766 gvnK--G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~-~v~V~~~--~~-~~l~~~~~~~~~l~ 839 (856)
+..| ..+++.+++++| ++++.+++||| +.||++| ++.+ |+ +|.|++. .+ |.+.+..++..+|+
T Consensus 137 ~~~Kp~~~~~~~~~~~~~------i~~~~~~~iGD-~~nDi~~-~~~a---G~~~i~~~~~~~~a~~v~~~~~el~~~l~ 205 (207)
T 2go7_A 137 FVRKPSPEAATYLLDKYQ------LNSDNTYYIGD-RTLDVEF-AQNS---GIQSINFLESTYEGNHRIQALADISRIFE 205 (207)
T ss_dssp CCCTTSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHH-HHHH---TCEEEESSCCSCTTEEECSSTTHHHHHTS
T ss_pred CCCCCCcHHHHHHHHHhC------CCcccEEEECC-CHHHHHH-HHHC---CCeEEEEecCCCCCCEEeCCHHHHHHHHh
Confidence 3455 899999999999 67899999999 9999999 7766 44 4677653 23 88888888776653
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=94.51 E-value=0.031 Score=56.07 Aligned_cols=63 Identities=10% Similarity=-0.114 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeC---CC-------CccccCCHHHHHHHH
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLD---SS-------FLHYLRMKMCMRFLS 838 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~---~~-------~~~~l~~~~~~~~~l 838 (856)
|..++..+++++| ++++++++||| +.||+.| .+.++- .++.|. +. +.|.+.+..++..+|
T Consensus 157 ~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~-a~~~G~--~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 157 APAAYALAPRAFG------VPAAQILFVSS-NGWDACG-ATWHGF--TTFWINRLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp SHHHHTHHHHHHT------SCGGGEEEEES-CHHHHHH-HHHHTC--EEEEECTTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred CHHHHHHHHHHhC------CCcccEEEEeC-CHHHHHH-HHHcCC--EEEEEcCCCCCchhccCCCCEEECCHHHHHHHH
Confidence 4667788999998 67899999999 9999999 776532 244442 11 228899999998888
Q ss_pred HHH
Q 003029 839 QNY 841 (856)
Q Consensus 839 ~~~ 841 (856)
++.
T Consensus 227 ~~~ 229 (233)
T 3umb_A 227 QAR 229 (233)
T ss_dssp HC-
T ss_pred HHh
Confidence 753
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=94.48 E-value=0.58 Score=51.84 Aligned_cols=94 Identities=5% Similarity=-0.036 Sum_probs=63.4
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC----chhhc--cCCeEEECCC--
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG----~~~~l--g~~g~lVnP~-- 512 (856)
|. +.+++++. .+|..||+||..+ | ..+.+||++++ .|+|+....+ .+..+ ...|+.+++.
T Consensus 307 v~-~~~~~~~~---~~l~~~d~~v~~~---G-~~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~ 374 (424)
T 2iya_A 307 VE-VHQWVPQL---DILTKASAFITHA---G-MGSTMEALSNA----VPMVAVPQIAEQTMNAERIVELGLGRHIPRDQV 374 (424)
T ss_dssp EE-EESSCCHH---HHHTTCSEEEECC---C-HHHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHTTSEEECCGGGC
T ss_pred eE-EecCCCHH---HHHhhCCEEEECC---c-hhHHHHHHHcC----CCEEEecCccchHHHHHHHHHCCCEEEcCcCCC
Confidence 55 36788865 5789999988643 4 36899999994 7888887643 12223 2357888765
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCH
Q 003029 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTA 548 (856)
Q Consensus 513 d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~ 548 (856)
+.++++++|.++|+++ +.+++.++..+.+...+.
T Consensus 375 ~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~ 408 (424)
T 2iya_A 375 TAEKLREAVLAVASDP--GVAERLAAVRQEIREAGG 408 (424)
T ss_dssp CHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCH
T ss_pred CHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcCc
Confidence 8999999999999864 334444554444544333
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=94.43 E-value=0.029 Score=61.65 Aligned_cols=54 Identities=13% Similarity=0.138 Sum_probs=40.7
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC---HhhHHHHhc
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD---RNVLDKNFQ 658 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~---~~~l~~~~~ 658 (856)
++++.++||+||||.... .+-|.+.++|+.|.+ .|..++++|+.+ .....+.+.
T Consensus 11 ~~~~~~l~D~DGvl~~g~---------------~~~p~a~~~l~~l~~-~g~~~~~vTNn~~~~~~~~~~~l~ 67 (352)
T 3kc2_A 11 SKKIAFAFDIDGVLFRGK---------------KPIAGASDALKLLNR-NKIPYILLTNGGGFSERARTEFIS 67 (352)
T ss_dssp -CCEEEEECCBTTTEETT---------------EECTTHHHHHHHHHH-TTCCEEEECSCCSSCHHHHHHHHH
T ss_pred ccCCEEEEECCCeeEcCC---------------eeCcCHHHHHHHHHH-CCCEEEEEeCCCCCCchHHHHHHH
Confidence 378999999999999752 244678999999986 699999999654 455444444
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=94.23 E-value=0.032 Score=54.38 Aligned_cols=63 Identities=11% Similarity=0.075 Sum_probs=50.0
Q ss_pred EEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC--Cc-cccCCHHHHHHHH
Q 003029 762 VRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS--FL-HYLRMKMCMRFLS 838 (856)
Q Consensus 762 V~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~--~~-~~l~~~~~~~~~l 838 (856)
..|...+|+.+++.+ . ++.+++||| +.||++| ++.+ +++|.+++. .+ |.+.+..++.++|
T Consensus 134 ~~~~~~~k~~~l~~l----~--------~~~~i~iGD-~~~Di~~-~~~a---g~~v~~~~~~~~ad~v~~~~~el~~~l 196 (201)
T 4ap9_A 134 IRLRFRDKGEFLKRF----R--------DGFILAMGD-GYADAKM-FERA---DMGIAVGREIPGADLLVKDLKELVDFI 196 (201)
T ss_dssp EECCSSCHHHHHGGG----T--------TSCEEEEEC-TTCCHHH-HHHC---SEEEEESSCCTTCSEEESSHHHHHHHH
T ss_pred CcCCccCHHHHHHhc----C--------cCcEEEEeC-CHHHHHH-HHhC---CceEEECCCCccccEEEccHHHHHHHH
Confidence 455667899999876 2 578999999 9999999 7665 557888765 23 8999999998888
Q ss_pred HHH
Q 003029 839 QNY 841 (856)
Q Consensus 839 ~~~ 841 (856)
+++
T Consensus 197 ~~l 199 (201)
T 4ap9_A 197 KNL 199 (201)
T ss_dssp HTC
T ss_pred HHh
Confidence 765
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=94.06 E-value=0.017 Score=58.82 Aligned_cols=79 Identities=10% Similarity=-0.069 Sum_probs=55.1
Q ss_pred CCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCcceEEeCCC------------CccccCCH
Q 003029 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTISTVRLDSS------------FLHYLRMK 831 (856)
Q Consensus 765 ~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~v~V~~~------------~~~~l~~~ 831 (856)
.+-.|..++.++++++| ++++++++||| +. ||++| .+.++-. +|.|... +.|.+.+.
T Consensus 148 ~~Kp~~~~~~~~~~~~g------~~~~~~i~iGD-~~~~Di~~-a~~aG~~--~~~v~~g~~~~~~~~~~~~~~~~i~~~ 217 (241)
T 2hoq_A 148 VKKPHPKIFKKALKAFN------VKPEEALMVGD-RLYSDIYG-AKRVGMK--TVWFRYGKHSERELEYRKYADYEIDNL 217 (241)
T ss_dssp CCTTCHHHHHHHHHHHT------CCGGGEEEEES-CTTTTHHH-HHHTTCE--EEEECCSCCCHHHHTTGGGCSEEESST
T ss_pred CCCCCHHHHHHHHHHcC------CCcccEEEECC-CchHhHHH-HHHCCCE--EEEECCCCCCcccccccCCCCEEECCH
Confidence 45567799999999999 67899999999 97 99999 7766432 3444221 12778899
Q ss_pred HHHHHHHHHHHHHHHhcCCCccc
Q 003029 832 MCMRFLSQNYLMMARAFQEPDQQ 854 (856)
Q Consensus 832 ~~~~~~l~~~~~~~~~~~~~~~~ 854 (856)
.++..+|++.-.. -..++|-||
T Consensus 218 ~el~~~l~~~~~~-~~~~~~~~~ 239 (241)
T 2hoq_A 218 ESLLEVLARESSS-NKKVHPPRQ 239 (241)
T ss_dssp THHHHHHHHCCSC-SSCSCCC--
T ss_pred HHHHHHHHHHhhc-cCCCCCccc
Confidence 9998888764333 234455554
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=94.03 E-value=0.014 Score=58.39 Aligned_cols=68 Identities=16% Similarity=-0.010 Sum_probs=52.2
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCC--C---------CccccCCHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDS--S---------FLHYLRMKM 832 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~--~---------~~~~l~~~~ 832 (856)
..+..|+.+++.+++++| ++++++++||| +.||++| .+.++- .+|.|.. . +.|-+.+..
T Consensus 144 ~~~kp~~~~~~~~~~~l~------~~~~~~i~iGD-~~~Di~~-a~~aG~--~~i~v~~g~~~~~~l~~~~ad~v~~~~~ 213 (233)
T 3s6j_A 144 SYGKPDPDLFLAAAKKIG------APIDECLVIGD-AIWDMLA-ARRCKA--TGVGLLSGGYDIGELERAGALRVYEDPL 213 (233)
T ss_dssp SCCTTSTHHHHHHHHHTT------CCGGGEEEEES-SHHHHHH-HHHTTC--EEEEEGGGSCCHHHHHHTTCSEEESSHH
T ss_pred CCCCCChHHHHHHHHHhC------CCHHHEEEEeC-CHHhHHH-HHHCCC--EEEEEeCCCCchHhHHhcCCCEEECCHH
Confidence 457788999999999999 67899999999 9999999 776643 2555532 1 227788888
Q ss_pred HHHHHHHHH
Q 003029 833 CMRFLSQNY 841 (856)
Q Consensus 833 ~~~~~l~~~ 841 (856)
++..+|++.
T Consensus 214 el~~~l~~~ 222 (233)
T 3s6j_A 214 DLLNHLDEI 222 (233)
T ss_dssp HHHHTGGGT
T ss_pred HHHHHHHHH
Confidence 888777543
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=93.67 E-value=0.037 Score=56.83 Aligned_cols=67 Identities=7% Similarity=-0.158 Sum_probs=53.4
Q ss_pred CCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC---------------CccccC
Q 003029 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS---------------FLHYLR 829 (856)
Q Consensus 765 ~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~---------------~~~~l~ 829 (856)
.+-.|+.+++.+++++| ++++++++||| +.||++| .+.++- .+|.|... +.|.+.
T Consensus 166 ~~Kp~~~~~~~~~~~lg------i~~~~~i~iGD-~~~Di~~-a~~aG~--~~i~v~~g~~~~~~~~~~~~~~~ad~vi~ 235 (259)
T 4eek_A 166 RGKPHPDLYTFAAQQLG------ILPERCVVIED-SVTGGAA-GLAAGA--TLWGLLVPGHPHPDGAAALSRLGAARVLT 235 (259)
T ss_dssp CCTTSSHHHHHHHHHTT------CCGGGEEEEES-SHHHHHH-HHHHTC--EEEEECCTTSCCSSCHHHHHHHTCSEEEC
T ss_pred CCCCChHHHHHHHHHcC------CCHHHEEEEcC-CHHHHHH-HHHCCC--EEEEEccCCCcccccHHHHHhcCcchhhC
Confidence 45667999999999999 67899999999 9999999 776642 24667432 228999
Q ss_pred CHHHHHHHHHHH
Q 003029 830 MKMCMRFLSQNY 841 (856)
Q Consensus 830 ~~~~~~~~l~~~ 841 (856)
+..++.++|++.
T Consensus 236 ~l~el~~~l~~~ 247 (259)
T 4eek_A 236 SHAELRAALAEA 247 (259)
T ss_dssp SHHHHHHHHHHT
T ss_pred CHHHHHHHHHhc
Confidence 999999998864
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=93.49 E-value=0.092 Score=53.98 Aligned_cols=38 Identities=13% Similarity=0.159 Sum_probs=31.4
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
.+.+.+.+.|+.|.+ .|..++|+|+.+...+...+..+
T Consensus 111 ~~~~~~~~~l~~l~~-~g~~~~i~tn~~~~~~~~~l~~~ 148 (277)
T 3iru_A 111 QLIPGWKEVFDKLIA-QGIKVGGNTGYGPGMMAPALIAA 148 (277)
T ss_dssp CBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHH
T ss_pred ccCcCHHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHhc
Confidence 456778889999986 68999999999998887777665
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=93.32 E-value=0.035 Score=54.73 Aligned_cols=61 Identities=5% Similarity=-0.158 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC----------CccccCCHHHHHHHH
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS----------FLHYLRMKMCMRFLS 838 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~----------~~~~l~~~~~~~~~l 838 (856)
|+.++..+++++| ++++++||| +.||+.| .+.++- .++.|... +.|.+.+..++..+|
T Consensus 130 ~~~~~~~~~~~~~--------~~~~~~vGD-~~~Di~~-a~~aG~--~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 197 (201)
T 2w43_A 130 SPKVYKYFLDSIG--------AKEAFLVSS-NAFDVIG-AKNAGM--RSIFVNRKNTIVDPIGGKPDVIVNDFKELYEWI 197 (201)
T ss_dssp CHHHHHHHHHHHT--------CSCCEEEES-CHHHHHH-HHHTTC--EEEEECSSSCCCCTTSCCCSEEESSHHHHHHHH
T ss_pred CHHHHHHHHHhcC--------CCcEEEEeC-CHHHhHH-HHHCCC--EEEEECCCCCCccccCCCCCEEECCHHHHHHHH
Confidence 4667778888875 578999999 9999999 665532 23454321 227888999988887
Q ss_pred HHH
Q 003029 839 QNY 841 (856)
Q Consensus 839 ~~~ 841 (856)
+++
T Consensus 198 ~~~ 200 (201)
T 2w43_A 198 LRY 200 (201)
T ss_dssp HHH
T ss_pred Hhc
Confidence 654
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=93.14 E-value=0.027 Score=56.33 Aligned_cols=17 Identities=12% Similarity=0.233 Sum_probs=14.7
Q ss_pred cCCeEEEEecCCccCCC
Q 003029 589 SNNRLLILGFNATLTEP 605 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~ 605 (856)
+++|+|+||+||||++.
T Consensus 3 ~~~k~i~fDlDGTL~d~ 19 (230)
T 3um9_A 3 HAIKAVVFDLYGTLYDV 19 (230)
T ss_dssp SSCCEEEECSBTTTBCG
T ss_pred CCceEEEEcCCCCcCcc
Confidence 35789999999999976
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=93.04 E-value=0.03 Score=55.13 Aligned_cols=41 Identities=7% Similarity=-0.048 Sum_probs=31.1
Q ss_pred HHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcc-eEEeCC
Q 003029 771 AAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIS-TVRLDS 822 (856)
Q Consensus 771 ~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~-~v~V~~ 822 (856)
.++..+++++| ++++.+++||| +.+|+.| .+.+ |+ ++.|..
T Consensus 152 ~~~~~~~~~~~------~~~~~~~~vgD-~~~Di~~-a~~a---G~~~~~~~~ 193 (206)
T 2b0c_A 152 RIYQHVLQAEG------FSPSDTVFFDD-NADNIEG-ANQL---GITSILVKD 193 (206)
T ss_dssp HHHHHHHHHHT------CCGGGEEEEES-CHHHHHH-HHTT---TCEEEECCS
T ss_pred HHHHHHHHHcC------CCHHHeEEeCC-CHHHHHH-HHHc---CCeEEEecC
Confidence 56778899998 67899999999 9999888 5544 43 444443
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=92.83 E-value=0.09 Score=52.42 Aligned_cols=39 Identities=10% Similarity=0.106 Sum_probs=33.1
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
.+.+.+.+.|+.|.+ .|..++|+|+.+...+...+..++
T Consensus 91 ~~~~~~~~~l~~l~~-~g~~~~i~s~~~~~~~~~~l~~~~ 129 (233)
T 3s6j_A 91 IALPGAVELLETLDK-ENLKWCIATSGGIDTATINLKALK 129 (233)
T ss_dssp EECTTHHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHTTT
T ss_pred ccCCCHHHHHHHHHH-CCCeEEEEeCCchhhHHHHHHhcc
Confidence 456778899999986 689999999999998888887764
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=92.83 E-value=0.049 Score=55.15 Aligned_cols=66 Identities=11% Similarity=-0.004 Sum_probs=49.4
Q ss_pred EeCCCCHHHHHHHHHHHhCcCCcCCCC-cceEEEEecCCcccccccccccccCcceEEeC--CC---------CccccCC
Q 003029 763 RAVGVTKGAAIDRILAEIVHSKKMKTA-IDYVLCIGHFLGKNCNLPLQFLMQTISTVRLD--SS---------FLHYLRM 830 (856)
Q Consensus 763 ~p~gvnKG~av~~ll~~l~~~~~~~~~-~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~--~~---------~~~~l~~ 830 (856)
.+.+..|+.+++.+++++| ++ ++++++||| +.||++| .+.++-. +|.|. +. +.|.+.+
T Consensus 162 ~~~~kp~~~~~~~~~~~~g------~~~~~~~i~vGD-~~~Di~~-a~~aG~~--~i~v~~g~~~~~~~~~~~ad~v~~~ 231 (240)
T 3sd7_A 162 DGTRVNKNEVIQYVLDLCN------VKDKDKVIMVGD-RKYDIIG-AKKIGID--SIGVLYGYGSFEEISESEPTYIVEN 231 (240)
T ss_dssp TSCCCCHHHHHHHHHHHHT------CCCGGGEEEEES-SHHHHHH-HHHHTCE--EEEESSSSCCHHHHHHHCCSEEESS
T ss_pred cCCCCCCHHHHHHHHHHcC------CCCCCcEEEECC-CHHHHHH-HHHCCCC--EEEEeCCCCCHHHHhhcCCCEEECC
Confidence 3567789999999999999 67 899999999 9999999 7776433 45553 21 1266777
Q ss_pred HHHHHHHH
Q 003029 831 KMCMRFLS 838 (856)
Q Consensus 831 ~~~~~~~l 838 (856)
..++.++|
T Consensus 232 ~~el~~~l 239 (240)
T 3sd7_A 232 VESIKDIL 239 (240)
T ss_dssp STTHHHHH
T ss_pred HHHHHHHh
Confidence 66666554
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=92.55 E-value=0.18 Score=49.99 Aligned_cols=60 Identities=8% Similarity=-0.094 Sum_probs=42.8
Q ss_pred HHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcc-eE-EeCCC----------CccccCCHHHHHHHHH
Q 003029 772 AIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIS-TV-RLDSS----------FLHYLRMKMCMRFLSQ 839 (856)
Q Consensus 772 av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~-~v-~V~~~----------~~~~l~~~~~~~~~l~ 839 (856)
....+++++| ++++++++||| +.+|+.+ +...|+ +| .|... .++.+.++.++...|+
T Consensus 145 ~~~~a~~~lg------~~p~e~l~VgD-s~~Di~a----A~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~~~eli~~l~ 213 (216)
T 3kbb_A 145 IYLLVLERLN------VVPEKVVVFED-SKSGVEA----AKSAGIERIYGVVHSLNDGKALLEAGAVALVKPEEILNVLK 213 (216)
T ss_dssp HHHHHHHHHT------CCGGGEEEEEC-SHHHHHH----HHHTTCCCEEEECCSSSCCHHHHHTTCSEEECGGGHHHHHH
T ss_pred HHHHHHHhhC------CCccceEEEec-CHHHHHH----HHHcCCcEEEEecCCCCCHHHHHhCCCcEECCHHHHHHHHH
Confidence 4566778888 67899999999 8888666 555554 44 34322 1266778899999998
Q ss_pred HHH
Q 003029 840 NYL 842 (856)
Q Consensus 840 ~~~ 842 (856)
+||
T Consensus 214 eLL 216 (216)
T 3kbb_A 214 EVL 216 (216)
T ss_dssp HHC
T ss_pred HHC
Confidence 875
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=92.30 E-value=0.075 Score=53.19 Aligned_cols=66 Identities=9% Similarity=-0.084 Sum_probs=50.6
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCcceEEeCCC--------CccccCCHHHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTISTVRLDSS--------FLHYLRMKMCM 834 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~v~V~~~--------~~~~l~~~~~~ 834 (856)
..+..|+.+++.+++++| ++++++++||| +. ||++| .+.++- .++.+... +.|.+.+..++
T Consensus 159 ~~~kp~~~~~~~~~~~lg------i~~~~~~~iGD-~~~~Di~~-a~~aG~--~~~~~~~~~~~~~~~~~d~vi~sl~e~ 228 (240)
T 3qnm_A 159 GVLKPRPEIFHFALSATQ------SELRESLMIGD-SWEADITG-AHGVGM--HQAFYNVTERTVFPFQPTYHIHSLKEL 228 (240)
T ss_dssp TCCTTSHHHHHHHHHHTT------CCGGGEEEEES-CTTTTHHH-HHHTTC--EEEEECCSCCCCCSSCCSEEESSTHHH
T ss_pred CCCCCCHHHHHHHHHHcC------CCcccEEEECC-CchHhHHH-HHHcCC--eEEEEcCCCCCCcCCCCceEECCHHHH
Confidence 456778999999999999 67899999999 95 99999 766632 24444322 22889999988
Q ss_pred HHHHH
Q 003029 835 RFLSQ 839 (856)
Q Consensus 835 ~~~l~ 839 (856)
..+++
T Consensus 229 ~~~~~ 233 (240)
T 3qnm_A 229 MNLLE 233 (240)
T ss_dssp HHHTC
T ss_pred HHHHh
Confidence 88765
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=92.24 E-value=0.074 Score=53.14 Aligned_cols=70 Identities=11% Similarity=-0.122 Sum_probs=50.5
Q ss_pred EEeCCCCHH---HHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCcceEEeCC---------------
Q 003029 762 VRAVGVTKG---AAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTISTVRLDS--------------- 822 (856)
Q Consensus 762 V~p~gvnKG---~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~v~V~~--------------- 822 (856)
+.....++. .+++. ++++| ++++++++||| +. ||++| .+.++- .++.|..
T Consensus 148 ~~~~KP~~~~~~~~l~~-~~~lg------i~~~~~~~vGD-~~~~Di~~-a~~aG~--~~~~~~~~~~~~g~g~~~~~~~ 216 (240)
T 3smv_A 148 VGSYKPNPNNFTYMIDA-LAKAG------IEKKDILHTAE-SLYHDHIP-ANDAGL--VSAWIYRRHGKEGYGATHVPSR 216 (240)
T ss_dssp HTSCTTSHHHHHHHHHH-HHHTT------CCGGGEEEEES-CTTTTHHH-HHHHTC--EEEEECTTCC-------CCCSS
T ss_pred cCCCCCCHHHHHHHHHH-HHhcC------CCchhEEEECC-CchhhhHH-HHHcCC--eEEEEcCCCcccCCCCCCCCcC
Confidence 334455666 56666 88888 67899999999 95 99999 776642 2334321
Q ss_pred -CC-ccccCCHHHHHHHHHHHH
Q 003029 823 -SF-LHYLRMKMCMRFLSQNYL 842 (856)
Q Consensus 823 -~~-~~~l~~~~~~~~~l~~~~ 842 (856)
.. .|.+.+..++.++|++++
T Consensus 217 ~~~ad~v~~~~~el~~~l~~~l 238 (240)
T 3smv_A 217 MPNVDFRFNSMGEMAEAHKQAL 238 (240)
T ss_dssp CCCCSEEESSHHHHHHHHHHHH
T ss_pred CCCCCEEeCCHHHHHHHHHHHh
Confidence 11 289999999999998875
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=92.03 E-value=0.065 Score=53.76 Aligned_cols=73 Identities=11% Similarity=-0.077 Sum_probs=47.2
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-----CccccCCHHHHH-HH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS-----FLHYLRMKMCMR-FL 837 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~-----~~~~l~~~~~~~-~~ 837 (856)
..+-.|+.+++.+++++| ++++++++||| +.||++| .+.++- .+|.|... +.|.+.+..++. ..
T Consensus 143 ~~~Kp~~~~~~~~~~~lg------i~~~~~i~vGD-s~~Di~~-a~~aG~--~~~~~~~~~~~~~ad~v~~s~~el~~~~ 212 (233)
T 3nas_A 143 AKGKPDPDIFLTAAAMLD------VSPADCAAIED-AEAGISA-IKSAGM--FAVGVGQGQPMLGADLVVRQTSDLTLEL 212 (233)
T ss_dssp ------CCHHHHHHHHHT------SCGGGEEEEEC-SHHHHHH-HHHTTC--EEEECC-------CSEECSSGGGCCHHH
T ss_pred CCCCCChHHHHHHHHHcC------CCHHHEEEEeC-CHHHHHH-HHHcCC--EEEEECCccccccCCEEeCChHhCCHHH
Confidence 445567789999999999 67899999999 9999999 776642 34444332 237788877764 34
Q ss_pred HHHHHHHHH
Q 003029 838 SQNYLMMAR 846 (856)
Q Consensus 838 l~~~~~~~~ 846 (856)
+.+++..++
T Consensus 213 ~~~~~~~~~ 221 (233)
T 3nas_A 213 LHEEWEQYR 221 (233)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444444
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=91.75 E-value=0.56 Score=51.93 Aligned_cols=122 Identities=8% Similarity=-0.030 Sum_probs=76.2
Q ss_pred CCceEEEeeccc---ccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCc
Q 003029 362 GRKVMLGVDRLD---MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 438 (856)
Q Consensus 362 ~~~iIl~V~Rld---~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~ 438 (856)
...++++.|++. ..|.+..+++|++.+ + .+ ++.+.++. +.. . .. ..
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~----~-~~----~v~~~g~~--~~~--------~----~~----~~---- 285 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ----G-RR----VILSRGWT--ELV--------L----PD----DR---- 285 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT----T-CC----EEEECTTT--TCC--------C----SC----CC----
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC----C-Ce----EEEEeCCc--ccc--------c----cC----CC----
Confidence 356778899984 567777777777653 1 22 33332221 100 0 00 00
Q ss_pred ccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC----chhhc--cCCeEEECC-
Q 003029 439 VPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNP- 511 (856)
Q Consensus 439 ~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG----~~~~l--g~~g~lVnP- 511 (856)
..+. +.+++++.+ +|..||+||. .-|. .++.|+++|+ .|+|+-...+ .+..+ ...|+.+++
T Consensus 286 ~~v~-~~~~~~~~~---ll~~~d~~v~---~~G~-~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~ 353 (416)
T 1rrv_A 286 DDCF-AIDEVNFQA---LFRRVAAVIH---HGSA-GTEHVATRAG----VPQLVIPRNTDQPYFAGRVAALGIGVAHDGP 353 (416)
T ss_dssp TTEE-EESSCCHHH---HGGGSSEEEE---CCCH-HHHHHHHHHT----CCEEECCCSBTHHHHHHHHHHHTSEEECSSS
T ss_pred CCEE-EeccCChHH---HhccCCEEEe---cCCh-hHHHHHHHcC----CCEEEccCCCCcHHHHHHHHHCCCccCCCCC
Confidence 1244 467888655 5699999997 3454 4999999994 7888765533 23333 235777765
Q ss_pred -CCHHHHHHHHHHHHcC
Q 003029 512 -WNITEVANAIARALNM 527 (856)
Q Consensus 512 -~d~~~lA~ai~~aL~~ 527 (856)
.+.++++++|.++ ++
T Consensus 354 ~~~~~~l~~~i~~l-~~ 369 (416)
T 1rrv_A 354 TPTFESLSAALTTV-LA 369 (416)
T ss_dssp CCCHHHHHHHHHHH-TS
T ss_pred CCCHHHHHHHHHHh-hC
Confidence 5889999999999 64
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=91.64 E-value=0.029 Score=55.52 Aligned_cols=62 Identities=15% Similarity=-0.026 Sum_probs=45.0
Q ss_pred CCCH--HHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeC--CC-------CccccCCHHHH
Q 003029 766 GVTK--GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLD--SS-------FLHYLRMKMCM 834 (856)
Q Consensus 766 gvnK--G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~--~~-------~~~~l~~~~~~ 834 (856)
+.+| +.+++++++++| ++++++++||| +.||++| .+.++- .++.|. .. +.|.+.+..++
T Consensus 135 ~~~KP~~~~~~~~~~~~~------~~~~~~i~vGD-~~~Di~~-a~~aG~--~~~~~~~~~~~~~~~~~a~~~~~~~~el 204 (209)
T 2hdo_A 135 PKRKPDPLPLLTALEKVN------VAPQNALFIGD-SVSDEQT-AQAANV--DFGLAVWGMDPNADHQKVAHRFQKPLDI 204 (209)
T ss_dssp SCCTTSSHHHHHHHHHTT------CCGGGEEEEES-SHHHHHH-HHHHTC--EEEEEGGGCCTTGGGSCCSEEESSGGGG
T ss_pred CCCCCCcHHHHHHHHHcC------CCcccEEEECC-ChhhHHH-HHHcCC--eEEEEcCCCCChhhhccCCEEeCCHHHH
Confidence 6789 999999999999 67899999999 9999999 776632 233332 11 22666666665
Q ss_pred HHH
Q 003029 835 RFL 837 (856)
Q Consensus 835 ~~~ 837 (856)
..+
T Consensus 205 ~~~ 207 (209)
T 2hdo_A 205 LEL 207 (209)
T ss_dssp GGG
T ss_pred HHh
Confidence 544
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=91.26 E-value=0.22 Score=54.50 Aligned_cols=88 Identities=11% Similarity=0.022 Sum_probs=55.6
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC----chhhc-c-CCeEEECCCCHHHH
Q 003029 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL-G-AGAILVNPWNITEV 517 (856)
Q Consensus 444 ~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG----~~~~l-g-~~g~lVnP~d~~~l 517 (856)
+.+.+++.+ +|..||+||.- -|+| +..|+++|+ .|+|+--+.+ .+..+ . ..|+.+++. +.+
T Consensus 292 ~~~~~p~~~---lL~~~~~~v~h---~G~~-s~~Eal~~G----vP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~--~~~ 358 (400)
T 4amg_A 292 VVEWIPLGA---LLETCDAIIHH---GGSG-TLLTALAAG----VPQCVIPHGSYQDTNRDVLTGLGIGFDAEAG--SLG 358 (400)
T ss_dssp EECCCCHHH---HHTTCSEEEEC---CCHH-HHHHHHHHT----CCEEECCC---CHHHHHHHHHHTSEEECCTT--TCS
T ss_pred EEeecCHHH---Hhhhhhheecc---CCcc-HHHHHHHhC----CCEEEecCcccHHHHHHHHHHCCCEEEcCCC--Cch
Confidence 467788665 56889998853 4555 678999994 7888755443 23333 1 236666654 457
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHhc
Q 003029 518 ANAIARALNMSPEEREKRHWHNFTHVTTH 546 (856)
Q Consensus 518 A~ai~~aL~~~~~er~~r~~~~~~~v~~~ 546 (856)
+++|.++|+++ +.+++.+++.+.+...
T Consensus 359 ~~al~~lL~d~--~~r~~a~~l~~~~~~~ 385 (400)
T 4amg_A 359 AEQCRRLLDDA--GLREAALRVRQEMSEM 385 (400)
T ss_dssp HHHHHHHHHCH--HHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHcCH--HHHHHHHHHHHHHHcC
Confidence 89999999864 3444555555555544
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=91.15 E-value=0.096 Score=53.26 Aligned_cols=65 Identities=5% Similarity=-0.103 Sum_probs=49.2
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC-----------CccccCCHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS-----------FLHYLRMKM 832 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~-----------~~~~l~~~~ 832 (856)
..+..|+.++..+++++| ++++++++||| +.||+.| .+.++-. +|.|... +.|.+.+..
T Consensus 162 ~~~Kp~p~~~~~~~~~l~------~~~~~~~~vGD-s~~Di~~-a~~aG~~--~v~v~~~~~~~~~~~~~~a~~~~~~~~ 231 (240)
T 2hi0_A 162 IRRKPAPDMTSECVKVLG------VPRDKCVYIGD-SEIDIQT-ARNSEMD--EIAVNWGFRSVPFLQKHGATVIVDTAE 231 (240)
T ss_dssp SCCTTSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHH-HHHTTCE--EEEESSSSSCHHHHHHTTCCCEECSHH
T ss_pred CCCCCCHHHHHHHHHHcC------CCHHHeEEEcC-CHHHHHH-HHHCCCe--EEEECCCCCchhHHHhcCCCEEECCHH
Confidence 467789999999999999 67899999999 9999999 7666422 4555321 126778887
Q ss_pred HHHHHH
Q 003029 833 CMRFLS 838 (856)
Q Consensus 833 ~~~~~l 838 (856)
++..+|
T Consensus 232 el~~~l 237 (240)
T 2hi0_A 232 KLEEAI 237 (240)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 776655
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=90.94 E-value=0.11 Score=51.86 Aligned_cols=66 Identities=11% Similarity=-0.013 Sum_probs=50.6
Q ss_pred CCCCHHHHHHHHHHHhC-cCCcCCCCcceEEEEecCCc-ccccccccccccCcceEEeCCC---------CccccCCHHH
Q 003029 765 VGVTKGAAIDRILAEIV-HSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTISTVRLDSS---------FLHYLRMKMC 833 (856)
Q Consensus 765 ~gvnKG~av~~ll~~l~-~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~v~V~~~---------~~~~l~~~~~ 833 (856)
.+-.|+.+++++++++| . +++++++||| +. ||++| .+.++- .+|.|... +.|.+.+..+
T Consensus 156 ~~kp~~~~~~~~~~~~g~~------~~~~~i~vGD-~~~~Di~~-a~~aG~--~~i~~~~~~~~~~~~~~ad~v~~~~~e 225 (238)
T 3ed5_A 156 FQKPMKEYFNYVFERIPQF------SAEHTLIIGD-SLTADIKG-GQLAGL--DTCWMNPDMKPNVPEIIPTYEIRKLEE 225 (238)
T ss_dssp SCTTCHHHHHHHHHTSTTC------CGGGEEEEES-CTTTTHHH-HHHTTC--EEEEECTTCCCCTTCCCCSEEESSGGG
T ss_pred CCCCChHHHHHHHHHcCCC------ChhHeEEECC-CcHHHHHH-HHHCCC--EEEEECCCCCCCcccCCCCeEECCHHH
Confidence 45677999999999987 4 5799999999 97 99999 776632 25566442 2288999999
Q ss_pred HHHHHHH
Q 003029 834 MRFLSQN 840 (856)
Q Consensus 834 ~~~~l~~ 840 (856)
+..+|++
T Consensus 226 l~~~l~~ 232 (238)
T 3ed5_A 226 LYHILNI 232 (238)
T ss_dssp HHHHHTC
T ss_pred HHHHHHh
Confidence 8887754
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=90.93 E-value=0.18 Score=49.59 Aligned_cols=34 Identities=15% Similarity=0.022 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhCcCCcCCCCcceEEEEecCCccccccccccc
Q 003029 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFL 811 (856)
Q Consensus 770 G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~ 811 (856)
..+++.+++++| ++++++++||| +.||++| .+.+
T Consensus 153 ~~~~~~~~~~~~------~~~~~~~~igD-~~~Di~~-a~~a 186 (211)
T 2i6x_A 153 EDIFLEMIADSG------MKPEETLFIDD-GPANVAT-AERL 186 (211)
T ss_dssp HHHHHHHHHHHC------CCGGGEEEECS-CHHHHHH-HHHT
T ss_pred HHHHHHHHHHhC------CChHHeEEeCC-CHHHHHH-HHHc
Confidence 345668889998 67899999999 9999999 6554
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=90.51 E-value=0.29 Score=48.15 Aligned_cols=64 Identities=8% Similarity=-0.039 Sum_probs=44.3
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC------Cc-c-ccCCHHHHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS------FL-H-YLRMKMCMR 835 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~------~~-~-~l~~~~~~~ 835 (856)
|+...|..+++++.. .++.+++||| +.||..| .+.+ |+.+.+.+. +. + .+.+..++.
T Consensus 129 p~p~~~~~~l~~l~~----------~~~~~~~iGD-~~~Di~~-a~~a---G~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 193 (206)
T 1rku_A 129 RQKDPKRQSVIAFKS----------LYYRVIAAGD-SYNDTTM-LSEA---HAGILFHAPENVIREFPQFPAVHTYEDLK 193 (206)
T ss_dssp CSSSHHHHHHHHHHH----------TTCEEEEEEC-SSTTHHH-HHHS---SEEEEESCCHHHHHHCTTSCEECSHHHHH
T ss_pred CCCchHHHHHHHHHh----------cCCEEEEEeC-ChhhHHH-HHhc---CccEEECCcHHHHHHHhhhccccchHHHH
Confidence 444567777766532 3578999999 9999999 6655 455555433 12 3 378899998
Q ss_pred HHHHHHH
Q 003029 836 FLSQNYL 842 (856)
Q Consensus 836 ~~l~~~~ 842 (856)
.+|++++
T Consensus 194 ~~l~~~~ 200 (206)
T 1rku_A 194 REFLKAS 200 (206)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 8887764
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=90.09 E-value=0.072 Score=51.53 Aligned_cols=38 Identities=11% Similarity=-0.085 Sum_probs=32.6
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCccccccccccc
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFL 811 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~ 811 (856)
..+..|+.+++.+++++| ++ ++++||| +.||++| .+.+
T Consensus 134 ~~~kp~~~~~~~~~~~~~------~~--~~~~iGD-~~~Di~~-a~~a 171 (190)
T 2fi1_A 134 FKRKPNPESMLYLREKYQ------IS--SGLVIGD-RPIDIEA-GQAA 171 (190)
T ss_dssp CCCTTSCHHHHHHHHHTT------CS--SEEEEES-SHHHHHH-HHHT
T ss_pred CCCCCCHHHHHHHHHHcC------CC--eEEEEcC-CHHHHHH-HHHc
Confidence 446678999999999998 55 8999999 9999999 7665
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=89.85 E-value=0.1 Score=52.52 Aligned_cols=64 Identities=11% Similarity=-0.083 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC--------CccccCCHHHHHHHH
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS--------FLHYLRMKMCMRFLS 838 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~--------~~~~l~~~~~~~~~l 838 (856)
-.|+.++..+++++| ++++.+++||| +.||+.| .+.++- .+|.|... +.|.+.+..++..+|
T Consensus 139 Kp~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~-a~~aG~--~~i~v~~g~~~~~~~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 139 KPSPTPVLKTLEILG------EEPEKALIVGD-TDADIEA-GKRAGT--KTALALWGYVKLNSQIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp CCTTHHHHHHHHHHT------CCGGGEEEEES-SHHHHHH-HHHHTC--EEEEETTSSCSCCCCCCSEEESSTTHHHHHH
T ss_pred CCChHHHHHHHHHhC------CCchhEEEECC-CHHHHHH-HHHCCC--eEEEEcCCCCCccccCCCEEECCHHHHHHHH
Confidence 378999999999999 67899999999 9999999 765532 23555421 227888888887776
Q ss_pred HH
Q 003029 839 QN 840 (856)
Q Consensus 839 ~~ 840 (856)
++
T Consensus 209 ~~ 210 (222)
T 2nyv_A 209 DN 210 (222)
T ss_dssp HT
T ss_pred HH
Confidence 53
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=89.82 E-value=0.14 Score=52.63 Aligned_cols=30 Identities=7% Similarity=0.000 Sum_probs=22.2
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCcccccccc-CCChhHHHHHHH
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMEL-KLHPDLKQPLNA 633 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~-~~s~~~~~~L~~ 633 (856)
++|+|+||+||||++.. . .+.+.+.+++++
T Consensus 5 ~ik~i~fDlDGTLld~~--------------~~~~~~~~~~~l~~ 35 (267)
T 1swv_A 5 KIEAVIFAWAGTTVDYG--------------CFAPLEVFMEIFHK 35 (267)
T ss_dssp CCCEEEECSBTTTBSTT--------------CCTTHHHHHHHHHT
T ss_pred CceEEEEecCCCEEeCC--------------CccHHHHHHHHHHH
Confidence 47899999999999862 2 345666666665
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=89.72 E-value=0.45 Score=47.63 Aligned_cols=42 Identities=14% Similarity=0.063 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcc-eEEeCC
Q 003029 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIS-TVRLDS 822 (856)
Q Consensus 770 G~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~-~v~V~~ 822 (856)
..+++.+++++| ++++++++||| +.+|++| .+.+ |+ +|.|..
T Consensus 176 ~~~~~~~~~~~g------~~~~~~~~vGD-~~~Di~~-a~~a---G~~~i~v~~ 218 (229)
T 4dcc_A 176 PEIFKAVTEDAG------IDPKETFFIDD-SEINCKV-AQEL---GISTYTPKA 218 (229)
T ss_dssp HHHHHHHHHHHT------CCGGGEEEECS-CHHHHHH-HHHT---TCEEECCCT
T ss_pred HHHHHHHHHHcC------CCHHHeEEECC-CHHHHHH-HHHc---CCEEEEECC
Confidence 356788899998 67899999999 9999999 5544 54 344443
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=89.69 E-value=0.08 Score=51.36 Aligned_cols=31 Identities=10% Similarity=0.252 Sum_probs=23.1
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L 634 (856)
..|+|+||+||||++. ...+++.+.++++++
T Consensus 3 ~~k~i~fDlDGTL~~~--------------~~~~~~~~~~~~~~~ 33 (207)
T 2go7_A 3 QKTAFIWDLDGTLLDS--------------YEAILSGIEETFAQF 33 (207)
T ss_dssp -CCEEEECTBTTTEEC--------------HHHHHHHHHHHHHHH
T ss_pred cccEEEEeCCCccccc--------------HHHHHHHHHHHHHHc
Confidence 3689999999999986 233556677777775
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=89.67 E-value=0.19 Score=50.21 Aligned_cols=16 Identities=19% Similarity=0.223 Sum_probs=14.1
Q ss_pred CCeEEEEecCCccCCC
Q 003029 590 NNRLLILGFNATLTEP 605 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~ 605 (856)
+.|+|+||+||||++.
T Consensus 3 ~~k~i~FDlDGTL~d~ 18 (233)
T 3umb_A 3 SIRAVVFDAYGTLFDV 18 (233)
T ss_dssp CCCEEEECSBTTTEET
T ss_pred CceEEEEeCCCccccc
Confidence 5789999999999975
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=89.58 E-value=0.1 Score=51.87 Aligned_cols=31 Identities=16% Similarity=0.194 Sum_probs=22.2
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L 634 (856)
.+|+|+||+||||++. .....+...++++++
T Consensus 3 ~ik~i~fDlDGTL~d~--------------~~~~~~~~~~~~~~~ 33 (229)
T 2fdr_A 3 GFDLIIFDCDGVLVDS--------------EIIAAQVESRLLTEA 33 (229)
T ss_dssp CCSEEEECSBTTTBCC--------------HHHHHHHHHHHHHHT
T ss_pred CccEEEEcCCCCcCcc--------------HHHHHHHHHHHHHHh
Confidence 4689999999999987 223445566666664
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=88.85 E-value=0.28 Score=49.83 Aligned_cols=73 Identities=14% Similarity=0.081 Sum_probs=51.3
Q ss_pred CCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeC-------CC--CccccCCHHHHHH
Q 003029 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLD-------SS--FLHYLRMKMCMRF 836 (856)
Q Consensus 766 gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~-------~~--~~~~l~~~~~~~~ 836 (856)
+..|..++++ ++ .+++.+++||| +.+|..| .+.+ ++.+... .. +.+.+.+..++..
T Consensus 149 ~~~K~~~~~~----~~------~~~~~~~~vGD-s~~Di~~-a~~a---G~~~~~~~~~~~~~~~~~~~~~~~~~~el~~ 213 (236)
T 2fea_A 149 GCCKPSVIHE----LS------EPNQYIIMIGD-SVTDVEA-AKLS---DLCFARDYLLNECREQNLNHLPYQDFYEIRK 213 (236)
T ss_dssp SSCHHHHHHH----HC------CTTCEEEEEEC-CGGGHHH-HHTC---SEEEECHHHHHHHHHTTCCEECCSSHHHHHH
T ss_pred CCcHHHHHHH----Hh------ccCCeEEEEeC-ChHHHHH-HHhC---CeeeechHHHHHHHHCCCCeeecCCHHHHHH
Confidence 6789877764 45 46789999999 9999998 6654 4333211 11 2378899999999
Q ss_pred HHHHHHHHHHhcCCCcc
Q 003029 837 LSQNYLMMARAFQEPDQ 853 (856)
Q Consensus 837 ~l~~~~~~~~~~~~~~~ 853 (856)
+|++++.....++++.+
T Consensus 214 ~l~~~~~~~~~~~~~~~ 230 (236)
T 2fea_A 214 EIENVKEVQEWLQNKNA 230 (236)
T ss_dssp HHHTSHHHHHHHTCC--
T ss_pred HHHHhHHHHHhhhCccc
Confidence 99988777666666543
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=88.77 E-value=0.11 Score=52.05 Aligned_cols=32 Identities=13% Similarity=0.147 Sum_probs=23.0
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L 634 (856)
+++|+|+||+||||++. ...+.+...++++++
T Consensus 5 m~~k~i~fDlDGTL~d~--------------~~~~~~~~~~~~~~~ 36 (238)
T 3ed5_A 5 KRYRTLLFDVDDTILDF--------------QAAEALALRLLFEDQ 36 (238)
T ss_dssp CCCCEEEECCBTTTBCH--------------HHHHHHHHHHHHHHT
T ss_pred ccCCEEEEcCcCcCcCC--------------chhHHHHHHHHHHHc
Confidence 35799999999999986 233445666666664
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=88.64 E-value=0.11 Score=52.50 Aligned_cols=32 Identities=9% Similarity=0.042 Sum_probs=24.0
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L 634 (856)
+++|+|+||+||||++. ...+.+.+.++++++
T Consensus 13 ~~~k~i~fDlDGTL~d~--------------~~~~~~~~~~~~~~~ 44 (254)
T 3umg_A 13 RNVRAVLFDTFGTVVDW--------------RTGIATAVADYAARH 44 (254)
T ss_dssp SBCCEEEECCBTTTBCH--------------HHHHHHHHHHHHHHT
T ss_pred CCceEEEEeCCCceecC--------------chHHHHHHHHHHHHh
Confidence 35799999999999986 233556677777765
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.46 E-value=0.35 Score=48.32 Aligned_cols=72 Identities=14% Similarity=0.175 Sum_probs=50.7
Q ss_pred hcCCeEEEEecCCccCCCCCCCCCCCcc---------ccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhc
Q 003029 588 RSNNRLLILGFNATLTEPVDTPGRRGDQ---------IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (856)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~~~p~~~~~~---------~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 658 (856)
..++++++||+||||+.....|....+. .......+-|-+.+.|+.|++ ...++|+|..+...++..+.
T Consensus 25 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~--~~~i~I~Tss~~~~a~~vl~ 102 (195)
T 2hhl_A 25 DYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQ--LFECVLFTASLAKYADPVAD 102 (195)
T ss_dssp GTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH--HSEEEEECSSCHHHHHHHHH
T ss_pred cCCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHc--CCeEEEEcCCCHHHHHHHHH
Confidence 3578899999999999764333110000 000112345789999999986 39999999999999999888
Q ss_pred ccC
Q 003029 659 EYN 661 (856)
Q Consensus 659 ~l~ 661 (856)
.++
T Consensus 103 ~ld 105 (195)
T 2hhl_A 103 LLD 105 (195)
T ss_dssp HHC
T ss_pred HhC
Confidence 874
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.34 E-value=0.25 Score=51.00 Aligned_cols=70 Identities=6% Similarity=-0.212 Sum_probs=54.3
Q ss_pred CCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCcceEEeCCC-----------Cc-cccCCH
Q 003029 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTISTVRLDSS-----------FL-HYLRMK 831 (856)
Q Consensus 765 ~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~~v~V~~~-----------~~-~~l~~~ 831 (856)
.+-.|..++..+++++| ++++.+++||| +. ||+.| .+.++- .+|.|... .+ |.+.+.
T Consensus 159 ~~Kp~~~~~~~~~~~~g------~~~~~~~~vGD-~~~~Di~~-a~~aG~--~~i~~~~~~~~~~~~~~~~~ad~v~~~l 228 (263)
T 3k1z_A 159 WPKPDPRIFQEALRLAH------MEPVVAAHVGD-NYLCDYQG-PRAVGM--HSFLVVGPQALDPVVRDSVPKEHILPSL 228 (263)
T ss_dssp SCTTSHHHHHHHHHHHT------CCGGGEEEEES-CHHHHTHH-HHTTTC--EEEEECCSSCCCHHHHHHSCGGGEESSG
T ss_pred CCCCCHHHHHHHHHHcC------CCHHHEEEECC-CcHHHHHH-HHHCCC--EEEEEcCCCCCchhhcccCCCceEeCCH
Confidence 34566789999999999 67899999999 96 99999 666532 34555321 13 899999
Q ss_pred HHHHHHHHHHHHH
Q 003029 832 MCMRFLSQNYLMM 844 (856)
Q Consensus 832 ~~~~~~l~~~~~~ 844 (856)
.++..+|+++..+
T Consensus 229 ~el~~~l~~~~~~ 241 (263)
T 3k1z_A 229 AHLLPALDCLEGS 241 (263)
T ss_dssp GGHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998765
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=88.28 E-value=0.11 Score=51.91 Aligned_cols=31 Identities=10% Similarity=0.153 Sum_probs=21.7
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L 634 (856)
+.|+|+||+||||++. ...+.+...++++++
T Consensus 1 ~ik~i~fDlDGTL~d~--------------~~~~~~~~~~~~~~~ 31 (233)
T 3nas_A 1 SLKAVIFDLDGVITDT--------------AEYHFLAWKHIAEQI 31 (233)
T ss_dssp -CCEEEECSBTTTBCH--------------HHHHHHHHHHHHHHT
T ss_pred CCcEEEECCCCCcCCC--------------HHHHHHHHHHHHHHc
Confidence 3689999999999986 233445666666554
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.73 E-value=0.14 Score=52.08 Aligned_cols=64 Identities=6% Similarity=-0.130 Sum_probs=46.0
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCc--ceEEEEecCCcccccccccccccCcceEEeCCC--------Cc-cccCCHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAI--DYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS--------FL-HYLRMKM 832 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~--d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~--------~~-~~l~~~~ 832 (856)
..+-.|..+++.+++++| +++ +++++||| +.||++| .+.++- .+|.|... .+ |.+.+..
T Consensus 168 ~~~Kp~~~~~~~~~~~lg------i~~~~~~~i~iGD-~~~Di~~-a~~aG~--~~i~v~~~~~~~~~~~~ad~v~~sl~ 237 (250)
T 3l5k_A 168 QHGKPDPDIFLACAKRFS------PPPAMEKCLVFED-APNGVEA-ALAAGM--QVVMVPDGNLSRDLTTKATLVLNSLQ 237 (250)
T ss_dssp CSCTTSTHHHHHHHHTSS------SCCCGGGEEEEES-SHHHHHH-HHHTTC--EEEECCCTTSCGGGSTTSSEECSCGG
T ss_pred cCCCCChHHHHHHHHHcC------CCCCcceEEEEeC-CHHHHHH-HHHcCC--EEEEEcCCCCchhhcccccEeecCHH
Confidence 445667889999999999 556 99999999 9999999 776642 24555321 12 7777776
Q ss_pred HHHHH
Q 003029 833 CMRFL 837 (856)
Q Consensus 833 ~~~~~ 837 (856)
++...
T Consensus 238 el~~~ 242 (250)
T 3l5k_A 238 DFQPE 242 (250)
T ss_dssp GCCGG
T ss_pred HhhHH
Confidence 65443
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.72 E-value=0.061 Score=54.86 Aligned_cols=32 Identities=16% Similarity=0.130 Sum_probs=23.5
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L 634 (856)
+.+|+|+||+||||++. ...+.+...++++++
T Consensus 28 ~~ik~i~fDlDGTL~d~--------------~~~~~~~~~~~~~~~ 59 (250)
T 3l5k_A 28 QPVTHLIFDMDGLLLDT--------------ERLYSVVFQEICNRY 59 (250)
T ss_dssp CCCSEEEEETBTTTBCH--------------HHHHHHHHHHHHHHT
T ss_pred cCCcEEEEcCCCCcCCC--------------HHHHHHHHHHHHHHh
Confidence 45899999999999986 233455666666664
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=87.62 E-value=0.36 Score=47.54 Aligned_cols=71 Identities=15% Similarity=0.188 Sum_probs=50.3
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccc---------cccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcc
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQI---------REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~---------~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 659 (856)
.+++++++|+|+||+.....|....+.. ......+-|-+.+.|++|.+ ...++|.|..+...++..+..
T Consensus 13 ~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~--~~~i~I~T~~~~~~a~~vl~~ 90 (181)
T 2ght_A 13 SDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGE--LFECVLFTASLAKYADPVADL 90 (181)
T ss_dssp TTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH--HSEEEEECSSCHHHHHHHHHH
T ss_pred CCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHh--CCCEEEEcCCCHHHHHHHHHH
Confidence 4678999999999997643331101100 00112345789999999986 499999999999999988887
Q ss_pred cC
Q 003029 660 YN 661 (856)
Q Consensus 660 l~ 661 (856)
++
T Consensus 91 ld 92 (181)
T 2ght_A 91 LD 92 (181)
T ss_dssp HC
T ss_pred HC
Confidence 74
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=87.59 E-value=0.14 Score=51.19 Aligned_cols=16 Identities=13% Similarity=0.171 Sum_probs=14.6
Q ss_pred CCeEEEEecCCccCCC
Q 003029 590 NNRLLILGFNATLTEP 605 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~ 605 (856)
++|+|+||+||||++.
T Consensus 4 ~~k~i~fDlDGTL~d~ 19 (240)
T 3qnm_A 4 KYKNLFFDLDDTIWAF 19 (240)
T ss_dssp CCSEEEECCBTTTBCH
T ss_pred CceEEEEcCCCCCcCc
Confidence 5799999999999986
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=86.74 E-value=0.17 Score=51.83 Aligned_cols=32 Identities=13% Similarity=0.124 Sum_probs=23.0
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L 634 (856)
..+|+|+||+||||++. ...+.+...++++++
T Consensus 26 ~~ik~i~fDlDGTL~d~--------------~~~~~~~~~~~~~~~ 57 (259)
T 4eek_A 26 APFDAVLFDLDGVLVES--------------EGIIAQVWQSVLAER 57 (259)
T ss_dssp CCCSEEEEESBTTTEEC--------------HHHHHHHHHHHHHHT
T ss_pred cCCCEEEECCCCCcccC--------------HHHHHHHHHHHHHHh
Confidence 36899999999999976 233445566666664
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=86.13 E-value=0.16 Score=50.68 Aligned_cols=17 Identities=18% Similarity=0.188 Sum_probs=14.9
Q ss_pred cCCeEEEEecCCccCCC
Q 003029 589 SNNRLLILGFNATLTEP 605 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~ 605 (856)
++.|+|+||+||||++.
T Consensus 4 ~~~k~i~fD~DGTL~d~ 20 (240)
T 3smv_A 4 TDFKALTFDCYGTLIDW 20 (240)
T ss_dssp GGCSEEEECCBTTTBCH
T ss_pred ccceEEEEeCCCcCcCC
Confidence 35799999999999986
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=85.20 E-value=0.19 Score=49.44 Aligned_cols=16 Identities=25% Similarity=0.459 Sum_probs=14.3
Q ss_pred CCeEEEEecCCccCCC
Q 003029 590 NNRLLILGFNATLTEP 605 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~ 605 (856)
..|+|+||+||||++.
T Consensus 3 ~~k~iifDlDGTL~d~ 18 (209)
T 2hdo_A 3 TYQALMFDIDGTLTNS 18 (209)
T ss_dssp CCSEEEECSBTTTEEC
T ss_pred cccEEEEcCCCCCcCC
Confidence 4689999999999986
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=85.02 E-value=0.46 Score=53.66 Aligned_cols=34 Identities=21% Similarity=0.236 Sum_probs=26.3
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCC------CHhhHHHH
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGS------DRNVLDKN 656 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR------~~~~l~~~ 656 (856)
.+.+.+.++|+.|.+ .|.+++|+|+. ....+...
T Consensus 100 ~~~~~~~~~L~~L~~-~g~~~~i~Tn~~~~~~~~~~~~~~~ 139 (555)
T 3i28_A 100 KINRPMLQAALMLRK-KGFTTAILTNTWLDDRAERDGLAQL 139 (555)
T ss_dssp EECHHHHHHHHHHHH-TTCEEEEEECCCCCCSTTHHHHHHH
T ss_pred CcChhHHHHHHHHHH-CCCEEEEEeCCCccccchhhHHHHH
Confidence 456778899999986 69999999997 55555544
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=84.72 E-value=1.1 Score=47.27 Aligned_cols=59 Identities=17% Similarity=0.133 Sum_probs=40.9
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHh
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 651 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~ 651 (856)
..+.+++|+|||+......-. ..-..-....+-|.+.++|+.|.+ .|+.++|+|||+..
T Consensus 158 ~~~~i~iD~dgtl~~~~~~~~--~~~~~~~~~~~~~g~~e~L~~L~~-~g~~~~v~T~k~~~ 216 (301)
T 1ltq_A 158 KPKAVIFDVDGTLAKMNGRGP--YDLEKCDTDVINPMVVELSKMYAL-MGYQIVVVSGRESG 216 (301)
T ss_dssp SCEEEEEETBTTTBCCSSCCT--TCGGGGGGCCBCHHHHHHHHHHHH-TTCEEEEEECSCCC
T ss_pred ccceEEEeCCCCcccccCCCc--hhhhhccccCCChHHHHHHHHHHH-CCCeEEEEeCCCcc
Confidence 347889999999987532110 000011234567899999999986 79999999999743
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=84.59 E-value=0.29 Score=47.18 Aligned_cols=31 Identities=13% Similarity=0.068 Sum_probs=22.6
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHh
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL 634 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L 634 (856)
+.|+|+||+||||++. ...+++...++++++
T Consensus 5 ~~k~i~fDlDGTL~d~--------------~~~~~~~~~~~~~~~ 35 (190)
T 2fi1_A 5 KYHDYIWDLGGTLLDN--------------YETSTAAFVETLALY 35 (190)
T ss_dssp CCSEEEECTBTTTBCH--------------HHHHHHHHHHHHHHT
T ss_pred cccEEEEeCCCCcCCC--------------HHHHHHHHHHHHHHh
Confidence 4689999999999986 233455666666664
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=84.47 E-value=0.24 Score=50.02 Aligned_cols=32 Identities=9% Similarity=0.225 Sum_probs=23.7
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhc
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCH 636 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~ 636 (856)
.|+|+||+||||++. .....+...++++++..
T Consensus 2 ~k~iiFDlDGTL~d~--------------~~~~~~~~~~~~~~~~~ 33 (241)
T 2hoq_A 2 VKVIFFDLDDTLVDT--------------SKLAEIARKNAIENMIR 33 (241)
T ss_dssp CCEEEECSBTTTBCH--------------HHHHHHHHHHHHHHHHH
T ss_pred ccEEEEcCCCCCCCC--------------hhhHHHHHHHHHHHHHH
Confidence 579999999999986 23344567777777653
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=84.34 E-value=0.53 Score=45.80 Aligned_cols=36 Identities=8% Similarity=-0.069 Sum_probs=30.7
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCccccccccccc
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFL 811 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~ 811 (856)
.+..+++.++++++ ++++++++||| +.||+.| .+.+
T Consensus 142 p~~~~~~~~~~~~~------~~~~~~~~vgD-~~~Di~~-a~~a 177 (200)
T 3cnh_A 142 PNPAMYRLGLTLAQ------VRPEEAVMVDD-RLQNVQA-ARAV 177 (200)
T ss_dssp TCHHHHHHHHHHHT------CCGGGEEEEES-CHHHHHH-HHHT
T ss_pred CCHHHHHHHHHHcC------CCHHHeEEeCC-CHHHHHH-HHHC
Confidence 45678999999999 67899999999 9999999 6655
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=84.14 E-value=0.71 Score=45.06 Aligned_cols=14 Identities=14% Similarity=0.237 Sum_probs=12.9
Q ss_pred eEEEEecCCccCCC
Q 003029 592 RLLILGFNATLTEP 605 (856)
Q Consensus 592 rLI~lD~DGTL~~~ 605 (856)
|+|+||+||||++.
T Consensus 2 k~iiFDlDGTL~d~ 15 (201)
T 2w43_A 2 IILAFDIFGTVLDT 15 (201)
T ss_dssp CEEEECCBTTTEEG
T ss_pred cEEEEeCCCceecc
Confidence 78999999999986
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=83.25 E-value=0.28 Score=49.42 Aligned_cols=15 Identities=27% Similarity=0.722 Sum_probs=13.8
Q ss_pred CeEEEEecCCccCCC
Q 003029 591 NRLLILGFNATLTEP 605 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~ 605 (856)
+|+|+||+||||++.
T Consensus 29 ik~iifDlDGTL~d~ 43 (240)
T 3sd7_A 29 YEIVLFDLDGTLTDP 43 (240)
T ss_dssp CSEEEECSBTTTEEC
T ss_pred ccEEEEecCCcCccC
Confidence 599999999999986
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=82.10 E-value=0.33 Score=49.24 Aligned_cols=15 Identities=13% Similarity=0.359 Sum_probs=13.8
Q ss_pred CeEEEEecCCccCCC
Q 003029 591 NRLLILGFNATLTEP 605 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~ 605 (856)
.|+|+||+||||++.
T Consensus 4 ~k~viFDlDGTL~ds 18 (240)
T 2hi0_A 4 YKAAIFDMDGTILDT 18 (240)
T ss_dssp CSEEEECSBTTTEEC
T ss_pred ccEEEEecCCCCccC
Confidence 689999999999987
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=81.56 E-value=1.3 Score=45.60 Aligned_cols=63 Identities=10% Similarity=-0.065 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCC-cccccccccccccCcc--eEEeCCC----------CccccCCHHHHH
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL-GKNCNLPLQFLMQTIS--TVRLDSS----------FLHYLRMKMCMR 835 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~-~nDe~M~f~~~~~~~~--~v~V~~~----------~~~~l~~~~~~~ 835 (856)
+...+..+++++| ++++.+++||| + .+|+.+ - ...|+ +|.|... +.|.+.+..++.
T Consensus 178 ~p~~~~~~~~~~~------~~~~~~~~vGD-s~~~Di~~-A---~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~ 246 (260)
T 2gfh_A 178 APSIFYHCCDLLG------VQPGDCVMVGD-TLETDIQG-G---LNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELP 246 (260)
T ss_dssp CHHHHHHHHHHHT------CCGGGEEEEES-CTTTHHHH-H---HHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHH
T ss_pred CHHHHHHHHHHcC------CChhhEEEECC-CchhhHHH-H---HHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHHH
Confidence 3678899999998 67899999999 8 899888 4 44455 6777431 127888999998
Q ss_pred HHHHHHH
Q 003029 836 FLSQNYL 842 (856)
Q Consensus 836 ~~l~~~~ 842 (856)
.+|+++.
T Consensus 247 ~~l~~~~ 253 (260)
T 2gfh_A 247 ALLQSID 253 (260)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 8887653
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=81.25 E-value=0.85 Score=44.65 Aligned_cols=14 Identities=14% Similarity=0.233 Sum_probs=12.8
Q ss_pred CeEEEEecCCccCC
Q 003029 591 NRLLILGFNATLTE 604 (856)
Q Consensus 591 ~rLI~lD~DGTL~~ 604 (856)
.|+++||+||||++
T Consensus 2 ~k~viFD~DGTL~d 15 (206)
T 1rku_A 2 MEIACLDLEGVLVP 15 (206)
T ss_dssp CEEEEEESBTTTBC
T ss_pred CcEEEEccCCcchh
Confidence 58999999999996
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=81.19 E-value=0.39 Score=48.89 Aligned_cols=44 Identities=11% Similarity=-0.000 Sum_probs=35.1
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeC
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLD 821 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~ 821 (856)
.|+.++.++++++| ++++++++||| +.||++| .+.++-. +|.|.
T Consensus 171 p~~~~~~~~~~~~~------~~~~~~~~vGD-~~~Di~~-a~~aG~~--~i~v~ 214 (243)
T 2hsz_A 171 PHPAPFYYLCGKFG------LYPKQILFVGD-SQNDIFA-AHSAGCA--VVGLT 214 (243)
T ss_dssp TSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHH-HHHHTCE--EEEES
T ss_pred cCHHHHHHHHHHhC------cChhhEEEEcC-CHHHHHH-HHHCCCe--EEEEc
Confidence 36889999999999 67899999999 9999999 7766422 35553
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=80.24 E-value=0.48 Score=47.72 Aligned_cols=65 Identities=6% Similarity=-0.058 Sum_probs=44.4
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcc-eEEeCCC--------------CccccCCH
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIS-TVRLDSS--------------FLHYLRMK 831 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~-~v~V~~~--------------~~~~l~~~ 831 (856)
..|...++.+++ + .+++++++||| +.+|+.+ ++++...|+ +|.|... +.|.+.+.
T Consensus 146 ~~K~~~~~~~~~--~------~~~~~~~~vgD-s~~d~~d-i~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~ 215 (231)
T 2p11_A 146 IHKELMLDQVME--C------YPARHYVMVDD-KLRILAA-MKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERI 215 (231)
T ss_dssp SSGGGCHHHHHH--H------SCCSEEEEECS-CHHHHHH-HHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSG
T ss_pred CChHHHHHHHHh--c------CCCceEEEEcC-ccchhhh-hHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCH
Confidence 456666776666 4 45889999999 9997777 777777664 4666432 22667777
Q ss_pred HHHHHHHHHH
Q 003029 832 MCMRFLSQNY 841 (856)
Q Consensus 832 ~~~~~~l~~~ 841 (856)
.++..+|+++
T Consensus 216 ~el~~~l~~~ 225 (231)
T 2p11_A 216 GDLVEMDAEW 225 (231)
T ss_dssp GGGGGCGGGG
T ss_pred HHHHHHHHHH
Confidence 7776666554
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 856 | ||||
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 1e-133 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 3e-08 | |
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 2e-05 | |
| d2bfwa1 | 196 | c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py | 0.001 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 403 bits (1037), Expect = e-133
Identities = 158/472 (33%), Positives = 238/472 (50%), Gaps = 22/472 (4%)
Query: 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQK 153
RL+VV+NR+ SAGGL +LG K W GW+G ++ Q
Sbjct: 2 RLVVVSNRIAPPDEHAA--------SAGGLAVGILGALKAAGGLWFGWSGETGNED--QP 51
Query: 154 ALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAA 213
L E + +YYN + N +LWP FHY RL + + +
Sbjct: 52 LKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHY-------RLDLVQFQRPAWDG 104
Query: 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR 273
Y++ N + AD + +D D++W HDYHL+ L++ + ++G+FLH PFP+ EI
Sbjct: 105 YLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFN 164
Query: 274 TLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVED-QGRLTRVAAFP 332
LP+ LL + DL+GF T + F+ + + G+ R +P
Sbjct: 165 ALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYP 224
Query: 333 IGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEEN 392
IGI+ + + P+ + +L+ + + V+RLD KG+P++ LA+E LE+
Sbjct: 225 IGIEPKEIAKQAA-GPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKY 283
Query: 393 SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 452
GK+ QIA +R DV YQ + Q+ GRING++G L P+++L++ D
Sbjct: 284 PQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKL 343
Query: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQ-DLKKGVLILSEFAGAAQSLGAGAILVNP 511
L ++ +DV LVT LRDGMNLV+ E+VA Q GVL+LS+FAGAA L A++VNP
Sbjct: 344 LMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT-SALIVNP 402
Query: 512 WNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563
++ EVA A+ RAL MS ER RH + + W E F+S+L V
Sbjct: 403 YDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 454
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 54.8 bits (130), Expect = 3e-08
Identities = 67/395 (16%), Positives = 135/395 (34%), Gaps = 27/395 (6%)
Query: 165 IPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADV 224
I VF +E V Y N ++ + L ++ + + +A+ + +
Sbjct: 54 IRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLND 113
Query: 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 284
+ + DVV HD+H +F +K+Y + + +H S + + L
Sbjct: 114 LLREEPLPDVVHFHDWHTVFAGALIKKYF-KIPAVFTIHRLNKSK-LPAFYFHEAGLSEL 171
Query: 285 VLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRAL 344
D+ HT Y V+ +R + +G++T V GID + +
Sbjct: 172 APYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYV---FNGIDCSFWNESY 228
Query: 345 EINPVQVHIKELQETFA--GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLL 402
K L F + + R D + LL + L +++
Sbjct: 229 LTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRF-- 286
Query: 403 QIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 462
+ PE + + E G + L+ + L S+DF + + + +
Sbjct: 287 ---IIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGL 343
Query: 463 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIA 522
+ ++ G ++ +D+ ILV + E+ANAI
Sbjct: 344 VALEAMCLGAIPIASAVGGLRDIITNE---------------TGILVKAGDPGELANAIL 388
Query: 523 RALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVS 557
+AL +S + K + + + ++ AE +V
Sbjct: 389 KALELSRSDLSKFRENCKKRAMSFSWEKSAERYVK 423
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 45.4 bits (106), Expect = 2e-05
Identities = 49/356 (13%), Positives = 93/356 (26%), Gaps = 47/356 (13%)
Query: 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE-YNSDMKVGWFLHTPFPS 268
+FAA A V ++ D+V HD+ P ++ ++ +H
Sbjct: 110 RFAALSLAAARIGAGVLPGWRP-DMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQ 168
Query: 269 SEIHRTLPSRSDLLRAVLAAD----------LVGFHTYDYARHFVSACTR---ILGFEGT 315
+ + S+ L + L G A VS + G
Sbjct: 169 GQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGM 228
Query: 316 PEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRK----------- 364
R + GID++ + A + + + A K
Sbjct: 229 GLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDD 288
Query: 365 ----VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTS 420
+ + RL KGI A ++ + V +
Sbjct: 289 DGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRL----------VVLGAGDVALEGALL 338
Query: 421 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFV 480
G H + D + + + + + +LR G V
Sbjct: 339 AAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTG 398
Query: 481 ACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNM--SPEEREK 534
D ++ A S A + +P + + AI R + P+ +
Sbjct: 399 GLADT-----VIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQ 449
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 38.6 bits (88), Expect = 0.001
Identities = 36/204 (17%), Positives = 68/204 (33%), Gaps = 24/204 (11%)
Query: 334 GIDSERFIRALEINPVQVHIKELQETFA--GRKVMLGVDRLDMI-KGIPQKLLAFEKFLE 390
GID + + K L F + + R D KG+ L A E
Sbjct: 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSS 60
Query: 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF 450
+ + +++ PE + + E G + L+ + L S+DF
Sbjct: 61 KKEFQEMRFIIIGK------GDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF 114
Query: 451 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVN 510
+ + + + + ++ G ++ +D+ ILV
Sbjct: 115 VIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNETG---------------ILVK 159
Query: 511 PWNITEVANAIARALNMSPEEREK 534
+ E+ANAI +AL +S + K
Sbjct: 160 AGDPGELANAILKALELSRSDLSK 183
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 856 | |||
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 99.95 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.93 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.93 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.89 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.88 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.87 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.86 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.86 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.85 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.84 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.84 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.82 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.8 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.79 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.79 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.79 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.76 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.75 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.73 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.83 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.17 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.05 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 98.01 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 97.96 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.9 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 97.82 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 97.74 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.59 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 97.45 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 97.33 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.18 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.16 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 95.96 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 95.21 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 95.1 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 95.05 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 95.0 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 94.29 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 94.12 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 94.05 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 93.6 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 93.05 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 92.94 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 91.92 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 91.4 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 91.38 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 90.98 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 90.84 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 90.01 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 88.41 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 88.24 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 87.64 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 86.59 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 86.34 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 83.95 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 82.04 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 80.57 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 80.54 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.2e-95 Score=838.72 Aligned_cols=450 Identities=35% Similarity=0.622 Sum_probs=413.0
Q ss_pred CcEEEEEcCCccceeecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEEecChH
Q 003029 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDED 172 (856)
Q Consensus 94 ~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~ 172 (856)
+||||||||+|+...+ ..++|||++||.++ +..+|+||||+|...++++. .......+++|.||+|+++
T Consensus 1 srlivvsnr~~~~~~~--------~~~~gGl~~al~~~~~~~~g~Wvgw~g~~~~~~~~--~~~~~~~~~~~~~v~l~~~ 70 (456)
T d1uqta_ 1 SRLVVVSNRIAPPDEH--------AASAGGLAVGILGALKAAGGLWFGWSGETGNEDQP--LKKVKKGNITWASFNLSEQ 70 (456)
T ss_dssp CCEEEEEEECCCCC------------CCCHHHHHHHHHHHHHCEEEEEEEEEESCCSSC--CEEEEETTEEEEEEEECHH
T ss_pred CCEEEEECCCCCCCCC--------CCCCccHHHHhHHHHhhCCCEEEecCCCCCcccch--hhhhhccCceeEEecCCHH
Confidence 5899999999998654 24799999999998 77899999999976544322 2223456899999999999
Q ss_pred hHHHHHhhhhhhhccccccCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHh
Q 003029 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (856)
Q Consensus 173 ~~~~~y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~ 251 (856)
++++||+||||++|||+|||+.... .|+ +.|++|++||+.||+++.+.++++|+||||||||+++|.+||+
T Consensus 71 ~~~~~Y~gf~n~~LWpl~H~~~~~~--------~~~~~~~~~Y~~vN~~fA~~l~~~~~~~d~iwvhDyhl~llp~~lR~ 142 (456)
T d1uqta_ 71 DLDEYYNQFSNAVLWPAFHYRLDLV--------QFQRPAWDGYLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRK 142 (456)
T ss_dssp HHHHHTTTHHHHTHHHHHTTCGGGC--------CCCHHHHHHHHHHHHHHHHHHGGGCCTTCEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHhhhccccccccCccccc--------cccHHHHHHHHHHHHHHHHHHHHhccCCCeEEEeccchhhhHHHHHH
Confidence 9999999999999999999985332 355 4599999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEecCCCchhhhhcCcccHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccC-CCceeeCCeeEEEEE
Q 003029 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGT-PEGVEDQGRLTRVAA 330 (856)
Q Consensus 252 ~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~-~~~v~~~g~~~~v~v 330 (856)
+.|+++|+||+|+|||++++|+++|++++|+++|+++|+||||+++|++||+.+|.++++.... ...+.+.|+.+++.+
T Consensus 143 ~~~~~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~ 222 (456)
T d1uqta_ 143 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEV 222 (456)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEE
T ss_pred hCCCCcEEEEeCCCCCChHHhccCcchHHHHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCCeEEecCceeeeee
Confidence 9999999999999999999999999999999999999999999999999999999999988653 456788999999999
Q ss_pred eecccChhhhhhhhcCCchHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCC
Q 003029 331 FPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 410 (856)
Q Consensus 331 iP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~ 410 (856)
+|+|||++.|......+ +.+.+.+++..++++++|++|||+++.||+..+|+||++|++++|+++++++|+|++.|+++
T Consensus 223 ~p~GID~~~~~~~~~~~-~~~~~~~l~~~~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~ 301 (456)
T d1uqta_ 223 YPIGIEPKEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRG 301 (456)
T ss_dssp CCCCCCHHHHHHHHHSC-CCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCST
T ss_pred ecCcccchhhhhhcccH-HHHHHHHHHHhcCCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCCccc
Confidence 99999999998866554 34566778888999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcC-CCCce
Q 003029 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-LKKGV 489 (856)
Q Consensus 411 ~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~-~~~g~ 489 (856)
+.++|.+++.++.++|++||++|+..+|.|++++.+.++++++.++|+.|||+++||++||||||++|||||+. .++|+
T Consensus 302 ~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~ 381 (456)
T d1uqta_ 302 DVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGV 381 (456)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCE
T ss_pred chHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999985 36789
Q ss_pred EEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhH
Q 003029 490 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563 (856)
Q Consensus 490 lVlSe~aG~~~~lg~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 563 (856)
||+|+++|+++++ .+|++|||+|++++|+||.++|+||++||++|+++++++|.+||+++|+++||.+|+++.
T Consensus 382 lIlS~~~G~~~~l-~~g~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 454 (456)
T d1uqta_ 382 LVLSQFAGAANEL-TSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 454 (456)
T ss_dssp EEEETTBGGGGTC-TTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSC
T ss_pred EEEeCCCCCHHHh-CCeEEECcCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhhc
Confidence 9999999999999 579999999999999999999999999999999999999999999999999999998753
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.95 E-value=1.6e-27 Score=243.31 Aligned_cols=221 Identities=13% Similarity=0.151 Sum_probs=174.4
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCceEEeeCceEE
Q 003029 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFL 672 (856)
Q Consensus 593 LI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~lgliaenG~~i 672 (856)
|||||+||||++..+.| ....++++++++|++|++ ++.|+|+|||+...++..+.. ..+++++||+.+
T Consensus 2 Li~~DlDGTL~~~~~~~---------~~~~i~~~~~~~l~~l~~--~~~v~i~TGR~~~~l~~~~~~-~~~~~~~ng~~~ 69 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNP---------EESYADAGLLSLISDLKE--RFDTYIVTGRSPEEISRFLPL-DINMICYHGACS 69 (229)
T ss_dssp EEEEECBTTTBCCCSCG---------GGCCCCHHHHHHHHHHHH--HSEEEEECSSCHHHHHHHSCS-SCEEEEGGGTEE
T ss_pred EEEEEecCCCCCCCCCh---------hhCCCCHHHHHHHHHHhh--CCCEEEEcCCCHHHhhhhcCc-cccEEecCeEEE
Confidence 89999999999876555 366799999999999985 678999999999999877654 458999999999
Q ss_pred EecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeE
Q 003029 673 RCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVE 752 (856)
Q Consensus 673 ~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~ 752 (856)
...+..+.... ......|.+.+.+.+..+....+|...+.+..++.+++..............+.+.+ ....+.
T Consensus 70 ~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~ 143 (229)
T d1u02a_ 70 KINGQIVYNNG-SDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIA-----RIFGVE 143 (229)
T ss_dssp EETTEEEECTT-GGGGHHHHHHHHHHHTTHHHHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHH-----HHHTCE
T ss_pred ecCCceeeecc-hhhhHHHHHHHHHHhHHhhcccCCceecccccceeeeehhhhhhhHHHHHHHHHHHh-----hcCCeE
Confidence 87655543322 344566777888888888888899999999999999987765443333333333333 223567
Q ss_pred EEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC--Cc-cccC
Q 003029 753 VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS--FL-HYLR 829 (856)
Q Consensus 753 v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~--~~-~~l~ 829 (856)
+.+|..++||.|+|+|||.|+++|+++ ++++|||| +.||++| |++++ .+++|++|+. .| |+++
T Consensus 144 ~~~~~~~idi~p~g~~Kg~al~~l~~~-----------~~~i~~GD-s~ND~~M-f~~~~-~~~av~~g~~~~~A~~~~~ 209 (229)
T d1u02a_ 144 TYYGKMIIELRVPGVNKGSAIRSVRGE-----------RPAIIAGD-DATDEAA-FEAND-DALTIKVGEGETHAKFHVA 209 (229)
T ss_dssp EEECSSEEEEECTTCCHHHHHHHHHTT-----------SCEEEEES-SHHHHHH-HHTTT-TSEEEEESSSCCCCSEEES
T ss_pred EEeeceEEEEecCCCCHHHHHHHHhcc-----------ccceeecC-CCChHHH-HhccC-CeEEEEeCCCCccCeEEcC
Confidence 888999999999999999999999753 57999999 9999999 99985 5788888864 34 9999
Q ss_pred CHHHHHHHHHHHHHHH
Q 003029 830 MKMCMRFLSQNYLMMA 845 (856)
Q Consensus 830 ~~~~~~~~l~~~~~~~ 845 (856)
++.+|+++|+.+-+-+
T Consensus 210 ~~~ev~~~l~~l~~~~ 225 (229)
T d1u02a_ 210 DYIEMRKILKFIEMLG 225 (229)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999885544
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.93 E-value=1.4e-24 Score=242.52 Aligned_cols=303 Identities=19% Similarity=0.214 Sum_probs=221.7
Q ss_pred HHHHHHHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCch---hhhhc--Cc------ccHHHHHHhhcC
Q 003029 220 MFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS---EIHRT--LP------SRSDLLRAVLAA 288 (856)
Q Consensus 220 ~fa~~i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~fr~--lp------~~~~il~~ll~a 288 (856)
..+..+......+|+||+|+++..+++.++++. .+.++.+++|..++.. ..+.. ++ ...........+
T Consensus 109 ~~~~~~~~~~~~pDiIh~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (437)
T d2bisa1 109 LLLNDLLREEPLPDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIA 187 (437)
T ss_dssp HHHHHHTTSSCCCSEEEEETGGGHHHHHHHHHH-HCCCEEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHS
T ss_pred HHHHHHHhcCCCCCEEEECChhhhhHhhhhhcc-ccCceeEEEeeccccccchhhhhhccchhhhhHHHHHHHHHHHHhh
Confidence 334444444445799999999988887777665 4789999999876532 11111 11 112233455678
Q ss_pred CEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh--cCCceE
Q 003029 289 DLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVM 366 (856)
Q Consensus 289 DlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iI 366 (856)
|.+...+......... .+.. ...++.++|+|+|++.|.+....+........+++++ .++++|
T Consensus 188 d~v~~~~~~~~~~~~~----~~~~-----------~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 252 (437)
T d2bisa1 188 DIVTTVSRGYLIDEWG----FFRN-----------FEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTF 252 (437)
T ss_dssp SEEEESCHHHHHHTHH----HHGG-----------GTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCSCEEE
T ss_pred hhhcccchhhhhhhhh----hhcc-----------ccCceEEEecccccccccccccchhhHHHHHhhhhhhhccCCceE
Confidence 9988877755443221 1111 1235788999999999887654444444455566666 367899
Q ss_pred EEeecccc-cCChHHHHHHHHHHHHh--CcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEE
Q 003029 367 LGVDRLDM-IKGIPQKLLAFEKFLEE--NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (856)
Q Consensus 367 l~V~Rld~-~KGi~~~L~Af~~~l~~--~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 443 (856)
+++||++. .||+..+++|+..+..+ .|+ +.|+++|.. .+.+... ++.+... .+ .+.+
T Consensus 253 ~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~~~----~~lvi~G~~----~~~~~~~---~~~~~~~----~~-----~~~~ 312 (437)
T d2bisa1 253 MFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKG----DPELEGW---ARSLEEK----HG-----NVKV 312 (437)
T ss_dssp EEESCBCSSSSCHHHHHHHHHHHTTSGGGGG----EEEEEECCB----CHHHHHH---HHHHHHT----CT-----TEEE
T ss_pred EEeecccccchhHHHHHhhhccccccccccc----ceeeeeccc----ccccccc---hhhhccc----cc-----ccee
Confidence 99999975 79999999999988653 344 558877632 1333222 2222211 11 2556
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc-cCCeEEECCCCHHHHHHHHH
Q 003029 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVANAIA 522 (856)
Q Consensus 444 ~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l-g~~g~lVnP~d~~~lA~ai~ 522 (856)
+.+.++.+++..+|+.||++++||..||+|++++|||||+ .|+|+|+.+|..+.+ +.+|++|+|.|++++|++|.
T Consensus 313 ~~~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G----~Pvi~~~~g~~~e~i~~~~G~~~~~~d~~~la~~i~ 388 (437)
T d2bisa1 313 ITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG----AIPIASAVGGLRDIITNETGILVKAGDPGELANAIL 388 (437)
T ss_dssp ECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTTT----CEEEEESCTTHHHHCCTTTCEEECTTCHHHHHHHHH
T ss_pred ccccCcHHHHHHHHhhhccccccccccccchHHHHHHHCC----CCEEEeCCCCcHHhEECCcEEEECCCCHHHHHHHHH
Confidence 7899999999999999999999999999999999999994 899999999988877 45799999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003029 523 RALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (856)
Q Consensus 523 ~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (856)
++|+++++.+.++.+++++.++.+|++.+++++++-.+++
T Consensus 389 ~ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~ 428 (437)
T d2bisa1 389 KALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGS 428 (437)
T ss_dssp HHHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHHHHTC
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9998777677888888889899999999999998876654
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.93 E-value=1e-24 Score=249.14 Aligned_cols=321 Identities=17% Similarity=0.223 Sum_probs=218.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcC--CCCEEEEeCccchhHHHHHH-hcCCCCeEEEEEecCCC----chhhhhcC--cc
Q 003029 207 FQSQFAAYIKANQMFADVVNKHYK--DGDVVWCHDYHLMFLPKCLK-EYNSDMKVGWFLHTPFP----SSEIHRTL--PS 277 (856)
Q Consensus 207 ~~~~w~~Y~~vN~~fa~~i~~~~~--~~DvIwvHDyhl~llp~~lr-~~~~~~~i~~flH~PfP----~~e~fr~l--p~ 277 (856)
|.+.|..|...++.+++.+..... ..||||+||+|..+.+.+++ ...+++++.+++|.... ....+..+ ++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~ 183 (477)
T d1rzua_ 104 YPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPA 183 (477)
T ss_dssp CTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCG
T ss_pred ccccHHHHHHHHHHHHhhhhhcccCCCCCEEEecchhHHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcch
Confidence 444577787888888776665544 46999999999999988887 44678999999997421 11122111 10
Q ss_pred -------------cHHHHHHhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhh
Q 003029 278 -------------RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRAL 344 (856)
Q Consensus 278 -------------~~~il~~ll~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~ 344 (856)
..-+..++..+|.+...+..+++..+.. ..+... ..+ ...+..++.++|+|||.+.|.+..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~---~~~~~~--~~~-~~~~~~~~~vi~ngv~~~~~~p~~ 257 (477)
T d1rzua_ 184 HAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTA---EFGMGL--EGV-IGSRAHVLHGIVNGIDADVWNPAT 257 (477)
T ss_dssp GGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSH---HHHTTC--HHH-HHTTGGGEEECCCCBCTTTSCTTT
T ss_pred hhcccccccccchhHHHHHHHHhhhhhhhccHHHHHHHHHH---hcCcch--hhh-hhhccccEEEEECCcchhhccccc
Confidence 1123345678999999998887765432 111100 000 112345688999999998886532
Q ss_pred cC-----------CchHHHHHHHHHHh----cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCC
Q 003029 345 EI-----------NPVQVHIKELQETF----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR 409 (856)
Q Consensus 345 ~~-----------~~~~~~~~~lr~~~----~~~~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r 409 (856)
.. .......+.++..+ ++.++|++|||+++.||++.+|+|++++++.++ .|+++|.+
T Consensus 258 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~------~l~~~G~G-- 329 (477)
T d1rzua_ 258 DHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGG------RLVVLGAG-- 329 (477)
T ss_dssp CTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTC------EEEEEECB--
T ss_pred cccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhhCC------eEEEEecC--
Confidence 10 01112233344443 246799999999999999999999999987654 35556532
Q ss_pred CChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCce
Q 003029 410 TDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV 489 (856)
Q Consensus 410 ~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~ 489 (856)
+.. ...++.++..+++. .+.+ .+..+.+++..+|+.||+||+||.+||||+|++||||| |.|
T Consensus 330 -~~~----~~~~~~~~~~~~~~--------~v~~-~~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~----G~P 391 (477)
T d1rzua_ 330 -DVA----LEGALLAAASRHHG--------RVGV-AIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRY----GCI 391 (477)
T ss_dssp -CHH----HHHHHHHHHHHTTT--------TEEE-EESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH----TCE
T ss_pred -Cch----HHHHHHHHHhhcCC--------eEEE-EcccChhHHHHHHHhCccccCCccccCCCHHHHHHHHc----CCC
Confidence 222 12333344434332 2554 56778899999999999999999999999999999999 489
Q ss_pred EEEeCCCCchhhc--c---------CCeEEECCCCHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 003029 490 LILSEFAGAAQSL--G---------AGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFV 556 (856)
Q Consensus 490 lVlSe~aG~~~~l--g---------~~g~lVnP~d~~~lA~ai~~aL~~--~~~er~~r~~~~~~~v~~~~~~~W~~~fl 556 (856)
+|+|+.+|.++.+ | .+|++|+|.|++++|++|.++|+. .++.+.++.+++.+ +.++|+.=+++++
T Consensus 392 vVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~a~~--~~fsw~~~a~~~~ 469 (477)
T d1rzua_ 392 PVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYA 469 (477)
T ss_dssp EEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHH
T ss_pred EEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHH--hhCCHHHHHHHHH
Confidence 9999999999987 2 279999999999999999998863 34455555444322 3588887777776
Q ss_pred HHHHH
Q 003029 557 SELND 561 (856)
Q Consensus 557 ~~l~~ 561 (856)
+-.++
T Consensus 470 ~lY~~ 474 (477)
T d1rzua_ 470 ALYSQ 474 (477)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65554
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.89 E-value=4e-22 Score=200.46 Aligned_cols=192 Identities=21% Similarity=0.249 Sum_probs=153.1
Q ss_pred ccChhhhhhhhcCCchHHHHHHHHHHh--cCCceEEEeeccc-ccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCC
Q 003029 334 GIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLD-MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 410 (856)
Q Consensus 334 GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iIl~V~Rld-~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~ 410 (856)
|||.+.|.+........+....+++++ +++++|++|||+. +.||++.+++|++.|.++.+. .++.|+++|..
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~--~~~~l~i~G~g--- 75 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF--QEMRFIIIGKG--- 75 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG--GGEEEEEECCB---
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhCCCCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCC--CCeEEEEEeec---
Confidence 899999988765555566777788887 4788999999997 589999999999999754332 13668877632
Q ss_pred ChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceE
Q 003029 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVL 490 (856)
Q Consensus 411 ~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~l 490 (856)
.+.++.+.+. +... ++ .++++.+.++.+++..+|+.||++++||..||||++++|||+| |.|+
T Consensus 76 -~~~~~~~~~~---~~~~----~~-----~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~----G~pv 138 (196)
T d2bfwa1 76 -DPELEGWARS---LEEK----HG-----NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL----GAIP 138 (196)
T ss_dssp -CHHHHHHHHH---HHHH----CT-----TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHT----TCEE
T ss_pred -ccchhhhhhh---hhhc----cc-----eeEEeeeccccccchhccccccccccccccccccccchhhhhc----Ccee
Confidence 2344333333 3222 11 2566789999999999999999999999999999999999999 4899
Q ss_pred EEeCCCCchhhc-cCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcC
Q 003029 491 ILSEFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547 (856)
Q Consensus 491 VlSe~aG~~~~l-g~~g~lVnP~d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~ 547 (856)
|+|..+|..+.+ +.+|++++|.|+++++++|.++|.+..+.+.++.+.+++++.+++
T Consensus 139 I~~~~~~~~e~i~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~fs 196 (196)
T d2bfwa1 139 IASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS 196 (196)
T ss_dssp EEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTC
T ss_pred eecCCCccceeecCCceeeECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCC
Confidence 999998888877 557999999999999999999999888777777777788776653
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.88 E-value=3.6e-22 Score=209.70 Aligned_cols=217 Identities=15% Similarity=0.180 Sum_probs=144.4
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEeeC
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliaen 668 (856)
+|||++|+||||+++. ...++++++++|++|++ .|+.|+++|||+...+.++++.++ .++|++|
T Consensus 2 IKli~~DlDGTLl~~~-------------~~~~~~~~~~~l~~l~~-~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~n 67 (269)
T d1rlma_ 2 VKVIVTDMDGTFLNDA-------------KTYNQPRFMAQYQELKK-RGIKFVVASGNQYYQLISFFPELKDEISFVAEN 67 (269)
T ss_dssp CCEEEECCCCCCSCTT-------------SCCCHHHHHHHHHHHHH-HTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGG
T ss_pred EEEEEEeCCccCcCCC-------------CcCChHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCcccceEeec
Confidence 6899999999999863 22345789999999997 699999999999999999999884 5999999
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcC---------CCcEEeeecc------------e----------
Q 003029 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERT---------PRSHFEQRET------------S---------- 717 (856)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt---------~gs~ie~k~~------------s---------- 717 (856)
|+.|...++.... .... .+.....+..+.... .+.++..... .
T Consensus 68 Ga~i~~~~~~~~~---~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (269)
T d1rlma_ 68 GALVYEHGKQLFH---GELT---RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEI 141 (269)
T ss_dssp GTEEEETTEEEEE---CCCC---HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGC
T ss_pred eeEEEECCcEEEE---eccc---hHHHHHHHHHHHhhcCceEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhh
Confidence 9999875443211 1111 222233333222211 1112211000 0
Q ss_pred --EEEEee-cCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEE
Q 003029 718 --LVWNYK-YADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVL 794 (856)
Q Consensus 718 --i~~~y~-~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vl 794 (856)
..+.+. ...++ +..++.+++ ..........+..+..++||.|+++|||.|+++|++++| +++++++
T Consensus 142 ~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~di~p~~~sK~~al~~l~~~lg------i~~~~vi 210 (269)
T d1rlma_ 142 DDVLFKFSLNLPDE----QIPLVIDKL-HVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWD------LSPQNVV 210 (269)
T ss_dssp CSCEEEEEEECCGG----GHHHHHHHH-HHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHT------CCGGGEE
T ss_pred cchheEEEecCCHH----HHHHHHHHH-HHHhhcceEEEEEcCceEEEecCchHHHHHHHHHhhhhc------cccccEE
Confidence 000000 01111 223334443 211122222345578899999999999999999999999 6789999
Q ss_pred EEecCCcccccccccccccCcceEEeCCCC------c-cccCCHHH--HHHHHHHHHH
Q 003029 795 CIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKMC--MRFLSQNYLM 843 (856)
Q Consensus 795 a~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~~--~~~~l~~~~~ 843 (856)
|||| +.||++| |+.+ +.+|.|+|.. | |-.++.++ |.+.|+++|.
T Consensus 211 ~~GD-~~ND~~M-l~~a---g~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~~~l~ 263 (269)
T d1rlma_ 211 AIGD-SGNDAEM-LKMA---RYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLD 263 (269)
T ss_dssp EEEC-SGGGHHH-HHHC---SEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred EEcC-CcchHHH-HHhC---CeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHh
Confidence 9999 9999999 8755 8899998852 2 65655444 8999998886
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=1.7e-22 Score=218.32 Aligned_cols=228 Identities=14% Similarity=0.155 Sum_probs=167.4
Q ss_pred cCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---cCC
Q 003029 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGR 363 (856)
Q Consensus 287 ~aDlIgf~t~~~~~~Fl~~~~~~lg~~~~~~~v~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~ 363 (856)
.++.+...+....+.++.. .+. ...++.++|+|||++.+.+... +. ....+|..+ .++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~----~~~-----------~~~~i~vi~~gv~~~~~~~~~~-~~---~~~~~r~~~~~~~~~ 195 (370)
T d2iw1a1 135 KSTKLMMLTDKQIADFQKH----YQT-----------EPERFQILPPGIYPDRKYSEQI-PN---SREIYRQKNGIKEQQ 195 (370)
T ss_dssp CCCEEEESCHHHHHHHHHH----HCC-----------CGGGEEECCCCCCGGGSGGGSC-TT---HHHHHHHHTTCCTTC
T ss_pred cCceEEEecHHHHHHHHHh----cCC-----------CcceEEEEEeecccccccccCc-hh---hhhhhhhccCCCccc
Confidence 4566666666555555431 121 2346789999999987765422 22 223445554 378
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEE
Q 003029 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (856)
Q Consensus 364 ~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 443 (856)
++|+++||+.+.||++.+++|++.+.+++|+.. ++++++.. . + . ++++++.+++.. ..+++
T Consensus 196 ~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~----~~ii~g~~--~-~--~----~~~~~~~~~~~~------~~v~~ 256 (370)
T d2iw1a1 196 NLLLQVGSDFGRKGVDRSIEALASLPESLRHNT----LLFVVGQD--K-P--R----KFEALAEKLGVR------SNVHF 256 (370)
T ss_dssp EEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTE----EEEEESSS--C-C--H----HHHHHHHHHTCG------GGEEE
T ss_pred eEEEEEeccccccchhhhcccccccccccccce----eeeccccc--c-c--c----cccccccccccc------ccccc
Confidence 899999999999999999999999988877643 55455422 1 1 1 233444444332 13565
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEE-CCCCHHHHHHH
Q 003029 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILV-NPWNITEVANA 520 (856)
Q Consensus 444 ~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lV-nP~d~~~lA~a 520 (856)
.+.. +++..+|+.||++|+||..||||++++|||||+ .|+|+|+.+|.++.+ |.+|.++ +|.|++++|++
T Consensus 257 -~g~~--~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G----~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~ 329 (370)
T d2iw1a1 257 -FSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAITAG----LPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEV 329 (370)
T ss_dssp -ESCC--SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHT----CCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHH
T ss_pred -cccc--cccccccccccccccccccccccceeeecccCC----eeEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHH
Confidence 4543 579999999999999999999999999999994 899999999999988 5667655 78999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 003029 521 IARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560 (856)
Q Consensus 521 i~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 560 (856)
|.++|+++ +.+.++.++++++++++++..|.+...+-++
T Consensus 330 i~~ll~d~-~~~~~~~~~ar~~~~~~~~~~~~~~~~~ii~ 368 (370)
T d2iw1a1 330 LRKALTQS-PLRMAWAENARHYADTQDLYSLPEKAADIIT 368 (370)
T ss_dssp HHHHHHCH-HHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred HHHHHcCH-HHHHHHHHHHHHHHHHhChhHHHHHHHHHHh
Confidence 99999964 5778888899999999999999987655443
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.86 E-value=2.1e-21 Score=204.17 Aligned_cols=218 Identities=13% Similarity=0.128 Sum_probs=141.1
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc---CceEEee
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY---NLWLAAE 667 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l---~lgliae 667 (856)
+|||++|+||||++. +..++++++++|++|++ +..++++|||++..+.+.+..+ +.++|++
T Consensus 2 ~Kli~~DlDGTL~~~--------------~~~i~~~~~~al~~l~~--~~~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~ 65 (267)
T d1nf2a_ 2 YRVFVFDLDGTLLND--------------NLEISEKDRRNIEKLSR--KCYVVFASGRMLVSTLNVEKKYFKRTFPTIAY 65 (267)
T ss_dssp BCEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHTT--TSEEEEECSSCHHHHHHHHHHHSSSCCCEEEG
T ss_pred eEEEEEeCCccccCC--------------cCccCHHHHHHHHHHHc--CCEEEEECCCChHHHHHHHHHhcccCCceecc
Confidence 589999999999976 45689999999999985 5679999999999988888775 3479999
Q ss_pred CceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecce-----------------EEEEeecCChhh-
Q 003029 668 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS-----------------LVWNYKYADVEF- 729 (856)
Q Consensus 668 nG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~s-----------------i~~~y~~~d~e~- 729 (856)
||+.|...++.- +....++.++ +.++++...+......+...+.. +.........+.
T Consensus 66 nGa~i~~~~~~~--i~~~~i~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (267)
T d1nf2a_ 66 NGAIVYLPEEGV--ILNEKIPPEV---AKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELV 140 (267)
T ss_dssp GGTEEEETTTEE--EEECCBCHHH---HHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHH
T ss_pred CCeEEEeccccc--ccccCCCHHH---HHHHHHHHHhcCceEEEeeCceEEecCCcHHHHHHHHhcCCCceecCcHHHHh
Confidence 999998643321 1112344333 34444433222111111100000 000000000000
Q ss_pred ------------hHHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEE
Q 003029 730 ------------GRIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCI 796 (856)
Q Consensus 730 ------------~~~qa~el~~~L~~~~~~~~~v~v-~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~ 796 (856)
...+.+++.+.+ .+.+.+ .+.+ ..+..++||.|+++|||.|+++|+++++ ++.++++||
T Consensus 141 ~~~~~~~i~~~~~~~~~~~~~~~l-~~~~~~-~~~~~~~~~~~~di~~~~~~K~~ai~~l~~~~~------i~~~~vva~ 212 (267)
T d1nf2a_ 141 SKMGTTKLLLIDTPERLDELKEIL-SERFKD-VVKVFKSFPTYLEIVPKNVDKGKALRFLRERMN------WKKEEIVVF 212 (267)
T ss_dssp HHHCBSEEEEECCHHHHHHHHHHH-HHHHTT-TSEEEEEETTEEEEECTTCCHHHHHHHHHHHHT------CCGGGEEEE
T ss_pred hhccceEEEEeccHHHHHHHHHHH-HHhhCC-cEEEEEeecceeeecCCCCchhHHHHHHHHhhc------cCcccEEEE
Confidence 012223333333 221121 2444 4578899999999999999999999999 678999999
Q ss_pred ecCCcccccccccccccCcceEEeCCCC------c-cccCCHHH--HHHHHHHHH
Q 003029 797 GHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKMC--MRFLSQNYL 842 (856)
Q Consensus 797 GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~~--~~~~l~~~~ 842 (856)
|| +.||.+| |+.+ +.+|.|+|.. | |-+++..+ |..+|++++
T Consensus 213 GD-~~ND~~m-l~~~---~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~~ll 262 (267)
T d1nf2a_ 213 GD-NENDLFM-FEEA---GLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLERIS 262 (267)
T ss_dssp EC-SHHHHHH-HTTC---SEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBC
T ss_pred cC-CcchHHH-HHhC---CcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHH
Confidence 99 9999999 8866 6889998752 2 66654443 777777654
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.86 E-value=7.1e-21 Score=201.10 Aligned_cols=214 Identities=12% Similarity=0.182 Sum_probs=141.9
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEeeC
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliaen 668 (856)
+|||++|+||||++. +..++++++++|++|.+ .|+.|+++|||++..+.+.+..++ .++|++|
T Consensus 1 iKli~~DlDGTLl~~--------------~~~i~~~~~~~l~~l~~-~Gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~n 65 (285)
T d1nrwa_ 1 MKLIAIDLDGTLLNS--------------KHQVSLENENALRQAQR-DGIEVVVSTGRAHFDVMSIFEPLGIKTWVISAN 65 (285)
T ss_dssp CCEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGG
T ss_pred CeEEEEECCccccCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHhCCCcEEEecC
Confidence 589999999999976 45689999999999997 699999999999999999999984 5899999
Q ss_pred ceEEEecC-CeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeec--------------CChh-----
Q 003029 669 GMFLRCTT-GKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKY--------------ADVE----- 728 (856)
Q Consensus 669 G~~i~~~~-~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~--------------~d~e----- 728 (856)
|+.+...+ +.+.. ..++ .+.+.++++.+........+...... +.... ..++
T Consensus 66 G~~i~~~~~~~i~~---~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (285)
T d1nrwa_ 66 GAVIHDPEGRLYHH---ETID---KKRAYDILSWLESENYYYEVFTGSAI--YTPQNGRELLDVELDRFRSANPEADLSV 137 (285)
T ss_dssp GTEEECTTCCEEEE---CCCC---HHHHHHHHHHHHHTTCEEEEEESSCE--EECCCHHHHHHHHHHHHHHHCTTSCHHH
T ss_pred ceeEEecCCceeee---ccCC---HHHHHHHHHHHHHcCCceEEecCceE--EeccccHHHHHHHHHhhhhcCcccchhh
Confidence 99998633 33322 2234 33444444443322111111110000 00000 0000
Q ss_pred ---------------------------------------hhHHHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCC
Q 003029 729 ---------------------------------------FGRIQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVT 768 (856)
Q Consensus 729 ---------------------------------------~~~~qa~el~~~L~~~~~~~~~v~v~~-g~~~vEV~p~gvn 768 (856)
............+ .....+.++. +..++||.|+++|
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~s~~~~ldi~~~~~~ 213 (285)
T d1nrwa_ 138 LKQAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRY----EHAEDLTLVSSAEHNFELSSRKAS 213 (285)
T ss_dssp HHHHHHHHHHTCCEEECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHH----TTCTTEEEECSSTTEEEEEETTCS
T ss_pred hhhhhhhhhccccceeechHHHHhhcccchhheeeecccchHHHHHHHHHHh----hcCCCeEEEEeCCcEEEEecccch
Confidence 0000111111111 1123466554 6789999999999
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHH--HHHHHHH
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKM--CMRFLSQ 839 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~--~~~~~l~ 839 (856)
||.|++++++++| ++.+++++||| +.||++| |+++ +.+|.|+|.. + |-.++.+ -|.+.|+
T Consensus 214 K~~ai~~l~~~~g------i~~~~vi~~GD-~~ND~~M-l~~a---~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 214 KGQALKRLAKQLN------IPLEETAAVGD-SLNDKSM-LEAA---GKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp HHHHHHHHHHHTT------CCGGGEEEEES-SGGGHHH-HHHS---SEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred hhhHHHHHHhhcc------cCcccEEEEeC-CHHHHHH-HHhC---CeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 9999999999999 67899999999 9999999 8876 7899998863 2 4454332 3667776
Q ss_pred HHH
Q 003029 840 NYL 842 (856)
Q Consensus 840 ~~~ 842 (856)
+||
T Consensus 283 ~ll 285 (285)
T d1nrwa_ 283 HLL 285 (285)
T ss_dssp HTC
T ss_pred HhC
Confidence 653
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=1e-21 Score=206.21 Aligned_cols=220 Identities=13% Similarity=0.215 Sum_probs=143.4
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC-----ce
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN-----LW 663 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-----lg 663 (856)
..+|||++|+||||++. +..++++++++|++|.+ .|+.|+|+|||++..+.++++.++ .+
T Consensus 2 ~~iKli~~DlDGTL~~~--------------~~~i~~~~~~al~~L~~-~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~ 66 (271)
T d1rkqa_ 2 LAIKLIAIDMDGTLLLP--------------DHTISPAVKNAIAAARA-RGVNVVLTTGRPYAGVHNYLKELHMEQPGDY 66 (271)
T ss_dssp CCCCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCGGGTHHHHHHTTCCSTTCE
T ss_pred CCeeEEEEeCCccccCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHhcCcCCCcE
Confidence 45899999999999976 45689999999999997 699999999999999999888863 46
Q ss_pred EEeeCceEEEec-CCeeeecccccCChHHHHHHHHHHHHHHhc-----CCCcEEeeecc-------------eEEE----
Q 003029 664 LAAENGMFLRCT-TGKWMTTMPEHLNMEWVDSLKHVFEYFTER-----TPRSHFEQRET-------------SLVW---- 720 (856)
Q Consensus 664 liaenG~~i~~~-~~~w~~~~~~~~~~~w~~~v~~i~~~~~~r-----t~gs~ie~k~~-------------si~~---- 720 (856)
+|++||+.+... ++... .....+......+..+.+.+... ..+.+...+.. ...+
T Consensus 67 ~i~~nGa~i~~~~~~~~i--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (271)
T d1rkqa_ 67 CITYNGALVQKAADGSTV--AQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAE 144 (271)
T ss_dssp EEEGGGTEEEETTTCCEE--EECCBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGG
T ss_pred EEEcCceeEeccCCCeEE--EeecccHHHHHHHHHHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhh
Confidence 999999998752 22211 11123433444444444433110 00011110000 0000
Q ss_pred ----------EeecCChhhhHHHHHHHHHHHhcCCCCCCCeE-EEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCC
Q 003029 721 ----------NYKYADVEFGRIQARDMLQHLWTGPISNASVE-VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTA 789 (856)
Q Consensus 721 ----------~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~-v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~ 789 (856)
.....+++ ..++..+.+ ...+. ..+. +..|..++||.|+++|||.|++.|+++++ ++
T Consensus 145 ~~~~~~~~~~~~~~~~~~----~~~~~~~~l-~~~~~-~~~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~------i~ 212 (271)
T d1rkqa_ 145 KMDPNTQFLKVMMIDEPA----ILDQAIARI-PQEVK-EKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLG------IK 212 (271)
T ss_dssp GSCTTCCBCEEEEECCHH----HHHHHHHHS-CHHHH-HHEEEEEEETTEEEEEETTCSHHHHHHHHHHHHT------CC
T ss_pred hcCcccceEEEEEecCHH----HHHHHHHHH-HHHhh-cceEEEEecCceEEecCCCCCcccccceehhhcc------cc
Confidence 00001121 122333333 11111 1234 45578899999999999999999999998 67
Q ss_pred cceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHHH--HHHHHHHHH
Q 003029 790 IDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKMC--MRFLSQNYL 842 (856)
Q Consensus 790 ~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~~--~~~~l~~~~ 842 (856)
.++++|||| +.||++| |+.+ +.+|.|+|.. + |-.++..+ +.+.|++++
T Consensus 213 ~~~ii~~GD-~~ND~~m-l~~~---~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~~~~ 269 (271)
T d1rkqa_ 213 PEEIMAIGD-QENDIAM-IEYA---GVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYV 269 (271)
T ss_dssp GGGEEEEEC-SGGGHHH-HHHS---SEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHT
T ss_pred hhcEEEEeC-cHhHHHH-HHhC---CcEEEeCCCCHHHHHhCCEEcCCCCcChHHHHHHHHh
Confidence 889999999 9999999 8876 5888998853 2 55544433 777777764
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.84 E-value=2.4e-20 Score=189.79 Aligned_cols=213 Identities=13% Similarity=0.170 Sum_probs=146.1
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc--CceEEee
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--NLWLAAE 667 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l--~lgliae 667 (856)
|.|+|+||+||||++. ...++++++++|++|.+ .|+.|+++|||+...++..+..+ +.+++++
T Consensus 1 kiK~i~~D~DGTL~~~--------------~~~i~~~~~~~l~~l~~-~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~ 65 (230)
T d1wr8a_ 1 KIKAISIDIDGTITYP--------------NRMIHEKALEAIRRAES-LGIPIMLVTGNTVQFAEAASILIGTSGPVVAE 65 (230)
T ss_dssp CCCEEEEESTTTTBCT--------------TSCBCHHHHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHHTCCSCEEEG
T ss_pred CceEEEEecCCCCcCC--------------CCccCHHHHHHHHHHHh-CCCeEEEEeCCcHHHHHHHHHhcCCCcccccc
Confidence 5799999999999986 45689999999999986 69999999999999999888776 4579999
Q ss_pred CceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCC
Q 003029 668 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPIS 747 (856)
Q Consensus 668 nG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~ 747 (856)
||+.+...... ... ......+. ....+...+...........+...+.+.-...+. ...+++.+++
T Consensus 66 ~g~~~~~~~~~--~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~------ 131 (230)
T d1wr8a_ 66 DGGAISYKKKR--IFL-ASMDEEWI-LWNEIRKRFPNARTSYTMPDRRAGLVIMRETINV----ETVREIINEL------ 131 (230)
T ss_dssp GGTEEEETTEE--EES-CCCSHHHH-HHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCH----HHHHHHHHHT------
T ss_pred cceeeeccccc--ccc-ccccHHHH-HHHHHHHhcccccceeecccceeeEEEecccccH----HHHHHHHHHh------
Confidence 99998864322 111 12222221 2223333332211111122233333322111122 2234555555
Q ss_pred CCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC----
Q 003029 748 NASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS---- 823 (856)
Q Consensus 748 ~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~---- 823 (856)
...+....+..++||+|++++|+.|++.++++++ ++++.+++||| +.||++| |+.+ +.+|.|++.
T Consensus 132 ~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~------i~~~~~~~iGD-~~NDi~m-l~~a---g~~vav~na~~~~ 200 (230)
T d1wr8a_ 132 NLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLG------IKPKEVAHVGD-GENDLDA-FKVV---GYKVAVAQAPKIL 200 (230)
T ss_dssp TCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHT------SCGGGEEEEEC-SGGGHHH-HHHS---SEEEECTTSCHHH
T ss_pred ccceEEeeCCcEEEEeeCCcCcchhhcccccccc------cchhheeeeec-CccHHHH-HHHC---CeEEEECCCCHHH
Confidence 2245567778899999999999999999999999 66889999999 9999999 8866 678999764
Q ss_pred --Cc-cccCCHH--HHHHHHHHHH
Q 003029 824 --FL-HYLRMKM--CMRFLSQNYL 842 (856)
Q Consensus 824 --~~-~~l~~~~--~~~~~l~~~~ 842 (856)
.+ |-+++.. .+.+.+++++
T Consensus 201 k~~A~~v~~~~~~~gv~~~i~~~l 224 (230)
T d1wr8a_ 201 KENADYVTKKEYGEGGAEAIYHIL 224 (230)
T ss_dssp HTTCSEECSSCHHHHHHHHHHHHH
T ss_pred HHhCCEEECCCCcCHHHHHHHHHH
Confidence 23 6665543 4666666665
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.84 E-value=1.1e-20 Score=198.89 Aligned_cols=226 Identities=15% Similarity=0.182 Sum_probs=148.4
Q ss_pred HHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc--
Q 003029 583 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY-- 660 (856)
Q Consensus 583 ~~~y~~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l-- 660 (856)
.++++.++.|||+||+||||+.+. ...++++++++|++|.+ +|+.|+|+|||++..+.+.++.+
T Consensus 2 ~~~~~~~~ikli~~DlDGTLl~~~-------------~~~i~~~~~~al~~l~~-~Gi~v~i~TGR~~~~~~~~~~~l~~ 67 (283)
T d2b30a1 2 EEALKGADIKLLLIDFDGTLFVDK-------------DIKVPSENIDAIKEAIE-KGYMVSICTGRSKVGILSAFGEENL 67 (283)
T ss_dssp HHHTTTCCCCEEEEETBTTTBCCT-------------TTCSCHHHHHHHHHHHH-HTCEEEEECSSCHHHHHHHHCHHHH
T ss_pred cccCcccCccEEEEECCCCCcCCC-------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCc
Confidence 467788999999999999998652 35689999999999986 79999999999999999888765
Q ss_pred ------CceEEeeCceEEEecCC-eeeecccccCChHHHHHHHHHHHHHHhcCCCcEEeeecceE---------------
Q 003029 661 ------NLWLAAENGMFLRCTTG-KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSL--------------- 718 (856)
Q Consensus 661 ------~lgliaenG~~i~~~~~-~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~ie~k~~si--------------- 718 (856)
..+.|+.||+.+....+ .... ...+..+...+.+.+..+... ...++...+...
T Consensus 68 ~~~~~~~~~~i~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (283)
T d2b30a1 68 KKMNFYGMPGVYINGTIVYDQIGYTLLD---ETIETDVYAELISYLVEKNLV-NQTIFHRGESNYVTEDNKYADFLQKMY 143 (283)
T ss_dssp HHHTCCSCSEEEGGGTEEECTTCCEEEE---CCCCHHHHHHHHHHHHHTTCG-GGEEEEETTEEEEETTCTTTTHHHHHH
T ss_pred ccccccCCceEEEeeeEEEcCCCcEeee---cccCHHHHHHHHHHHHhhccc-ceEEEEecceeEEeccchHHHHHHHHh
Confidence 23578999999885322 2111 223433333333333322110 011111111000
Q ss_pred ------EEEe-------------ecCChhhhHHHHHHHHHHHhcCCCCCCCeE-EEEcCcEEEEEeCCCCHHHHHHHHHH
Q 003029 719 ------VWNY-------------KYADVEFGRIQARDMLQHLWTGPISNASVE-VVQGSKSVEVRAVGVTKGAAIDRILA 778 (856)
Q Consensus 719 ------~~~y-------------~~~d~e~~~~qa~el~~~L~~~~~~~~~v~-v~~g~~~vEV~p~gvnKG~av~~ll~ 778 (856)
.... -..++ ...+++.+.+ ...+.. ... +..+..++||.|+++|||.|++.+++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~i~~~~~~K~~~l~~l~~ 217 (283)
T d2b30a1 144 SENRSIIIRHNEMLKYRTMNKLMIVLDP----SESKTVIGNL-KQKFKN-KLTIFTTYNGHAEVTKLGHDKYTGINYLLK 217 (283)
T ss_dssp SCCCCEEECHHHHTTCCCCSEEEECCCT----TTHHHHHHHH-HHHSTT-TEEEEECTTSCEEEEETTCCHHHHHHHHHH
T ss_pred hccccccccHHHHhhcccceEEEEecCH----HHHHHHHHHH-HHHhcc-cceEEEecceeEeecCCcchhHHHHHHHhh
Confidence 0000 00001 1122333333 221222 233 44567899999999999999999999
Q ss_pred HhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCCHH---HHHHHHHHHHH
Q 003029 779 EIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRMKM---CMRFLSQNYLM 843 (856)
Q Consensus 779 ~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~~~---~~~~~l~~~~~ 843 (856)
+++ ++.++++|||| +.||++| |+.+ +.+|.|+|.. + |-+...+ -|+++|++++.
T Consensus 218 ~~~------i~~~~vi~~GD-~~ND~~M-l~~a---~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~~~~~ 281 (283)
T d2b30a1 218 HYN------ISNDQVLVVGD-AENDIAM-LSNF---KYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFD 281 (283)
T ss_dssp HTT------CCGGGEEEEEC-SGGGHHH-HHSC---SEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHT
T ss_pred hcc------cccceEEEecC-ChhhHHH-HHhC---CcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHHHHHc
Confidence 998 67899999999 9999999 8876 5789998862 2 6665433 38999998874
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.82 E-value=2.4e-20 Score=195.27 Aligned_cols=216 Identities=14% Similarity=0.151 Sum_probs=136.9
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcc--c--CceEEe
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE--Y--NLWLAA 666 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~--l--~lglia 666 (856)
.|+||||+||||++.. ...++++++++|++|.+ .|+.|+++|||+...+...+.. + ..++|+
T Consensus 1 ~k~if~DlDGTL~~~~-------------~~~i~~~~~~al~~l~~-~gi~v~~~TGR~~~~~~~l~~~~~~~~~~~~I~ 66 (260)
T d2rbka1 1 TKALFFDIDGTLVSFE-------------THRIPSSTIEALEAAHA-KGLKIFIATGRPKAIINNLSELQDRNLIDGYIT 66 (260)
T ss_dssp CCEEEECSBTTTBCTT-------------TSSCCHHHHHHHHHHHH-TTCEEEEECSSCGGGCCSCHHHHHTTCCCEEEE
T ss_pred CeEEEEECCCCCcCCC-------------CCCCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHHhcCCCCceEe
Confidence 3899999999999762 35689999999999996 6999999999999887654332 2 358999
Q ss_pred eCceEEEecCCe-eeecccccCChHHHHHHHHHHHHHHhcCCCcEE-eeecceEEEE----------e---ecCC-hhhh
Q 003029 667 ENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF-EQRETSLVWN----------Y---KYAD-VEFG 730 (856)
Q Consensus 667 enG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~i-e~k~~si~~~----------y---~~~d-~e~~ 730 (856)
+||+++..+++. |.. .++.+....+.++++.+ .....+ .......... + .... ..+.
T Consensus 67 ~nGa~i~~~~~~i~~~----~l~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (260)
T d2rbka1 67 MNGAYCFVGEEVIYKS----AIPQEEVKAMAAFCEKK---GVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFE 139 (260)
T ss_dssp GGGTEEEETTEEEEEC----CCCHHHHHHHHHHHHHH---TCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHH
T ss_pred cCCcccccCccccccc----CCCHHHHHHHHHHHHHc---CCcEEEEecCceeeccchHHHHHHHHHhhccCcCcccCHh
Confidence 999999875543 332 34544444444444433 111111 1111110000 0 0000 0000
Q ss_pred HH-----------HHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEec
Q 003029 731 RI-----------QARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (856)
Q Consensus 731 ~~-----------qa~el~~~L~~~~~~~~~v~v~~-g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD 798 (856)
.. ...+....+...+ ..+++.. +..++||.|+++|||.|+++|+++++ ++.++++||||
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ei~p~~~sK~~al~~l~~~~~------i~~~~~~a~GD 210 (260)
T d2rbka1 140 EASNKEVIQMTPFITEEEEKEVLPSI---PTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFG------IKLEETMSFGD 210 (260)
T ss_dssp HHHTSCCSEEEECCCHHHHHHHGGGS---TTCEEECSSTTCCEEESTTCSHHHHHHHHHHHHT------CCGGGEEEEEC
T ss_pred HhcCcceEEEeecCCHHHHHHHHHHh---ccccceeecCcEEEEEeCCCCHHHHHHHHHHhcc------ccHhheeEecC
Confidence 00 0011112221211 2345554 56789999999999999999999999 67899999999
Q ss_pred CCcccccccccccccCcceEEeCCCC------c-cccCC--HHHHHHHHHHH
Q 003029 799 FLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRM--KMCMRFLSQNY 841 (856)
Q Consensus 799 ~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~--~~~~~~~l~~~ 841 (856)
+.||++| |+.+ +.+|.|+|.. + |=.++ ..-|.++|+.|
T Consensus 211 -~~ND~~M-l~~a---~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~~ 257 (260)
T d2rbka1 211 -GGNDISM-LRHA---AIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHF 257 (260)
T ss_dssp -SGGGHHH-HHHS---SEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred -CcccHHH-HHhC---CeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHHh
Confidence 9999999 8766 7789998852 2 32222 23477777665
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.80 E-value=9e-20 Score=188.70 Aligned_cols=193 Identities=14% Similarity=0.140 Sum_probs=127.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC----ceEE
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----LWLA 665 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~----lgli 665 (856)
++.||++|+||||+++ ... ++.++++.++.+ +|+.|+|+|||++..+.++++.++ .++|
T Consensus 2 ~~~li~~DlDGTL~~~--------------~~~--~~~~~~~~~~~~-~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i 64 (244)
T d1s2oa1 2 RQLLLISDLDNTWVGD--------------QQA--LEHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEPDYWL 64 (244)
T ss_dssp CSEEEEECTBTTTBSC--------------HHH--HHHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEE
T ss_pred CceEEEEECcccCCCC--------------CCC--HHHHHHHHHHHc-CCCEEEEECCCCHHHHHHHHHHcCCCCCceEE
Confidence 5679999999999976 222 245566666664 699999999999999999988764 3689
Q ss_pred eeCceEEEecCC---eeeecccccCChHHHHHHHHHHHHHHhcCCCcEE----eeecceEEEEeecCChhhhHHHHHHHH
Q 003029 666 AENGMFLRCTTG---KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF----EQRETSLVWNYKYADVEFGRIQARDML 738 (856)
Q Consensus 666 aenG~~i~~~~~---~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~i----e~k~~si~~~y~~~d~e~~~~qa~el~ 738 (856)
++||+.+..... .|...+..... ++.+..+++ ..++... +.....+.+.+.....+.. .+++.
T Consensus 65 ~~~G~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 134 (244)
T d1s2oa1 65 TAVGSEIYHPEGLDQHWADYLSEHWQ---RDILQAIAD----GFEALKPQSPLEQNPWKISYHLDPQACPTV---IDQLT 134 (244)
T ss_dssp ETTTTEEEETTEECHHHHHHHHTTCC---HHHHHHHHH----TCTTEEECCGGGCBTTBEEEEECTTSCTHH---HHHHH
T ss_pred eccceEEEEccCcchHHHHHHHHHHh---HHHHHHHHh----hcccccccChhhhcceEEEEeccccccHHH---HHHHH
Confidence 999999986432 12221111111 122223333 3333222 2233445555543332221 22333
Q ss_pred HHHhcCCCCCCCeE-EEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcce
Q 003029 739 QHLWTGPISNASVE-VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIST 817 (856)
Q Consensus 739 ~~L~~~~~~~~~v~-v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~ 817 (856)
..+ ..... .+. +..+..++||.|++++||.|++.|++++| ++.++++|||| +.||++| |+.+ +.+
T Consensus 135 ~~~-~~~~~--~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~g------i~~~~~v~~GD-~~ND~~M-l~~~---~~~ 200 (244)
T d1s2oa1 135 EML-KETGI--PVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLA------MEPSQTLVCGD-SGNDIGL-FETS---ARG 200 (244)
T ss_dssp HHH-HTSSC--CEEEEEETTTEEEEEETTCSHHHHHHHHHHHTT------CCGGGEEEEEC-SGGGHHH-HTSS---SEE
T ss_pred HHH-Hhhcc--cceeeecCCcEEEEEeCccchhHHHHHHHHhcc------CChhhEEEEcC-CCCCHHH-HhhC---CcE
Confidence 333 32221 333 44567899999999999999999999999 67889999999 9999999 8866 688
Q ss_pred EEeCCC
Q 003029 818 VRLDSS 823 (856)
Q Consensus 818 v~V~~~ 823 (856)
|.|+|.
T Consensus 201 vav~na 206 (244)
T d1s2oa1 201 VIVRNA 206 (244)
T ss_dssp EECTTC
T ss_pred EEeCCC
Confidence 899874
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.79 E-value=6.7e-19 Score=180.04 Aligned_cols=208 Identities=14% Similarity=0.113 Sum_probs=140.6
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc--CceEEeeC
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--NLWLAAEN 668 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l--~lgliaen 668 (856)
+|+|+||+||||++. ...++++++++|++|.+ .|+.|+++|||+...+......+ ...++++|
T Consensus 3 iKli~~D~DGTL~~~--------------~~~i~~~~~~al~~l~~-~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~ 67 (225)
T d1l6ra_ 3 IRLAAIDVDGNLTDR--------------DRLISTKAIESIRSAEK-KGLTVSLLSGNVIPVVYALKIFLGINGPVFGEN 67 (225)
T ss_dssp CCEEEEEHHHHSBCT--------------TSCBCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGG
T ss_pred eEEEEEecCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCchhhhHHHHHHcCCCceEEeec
Confidence 689999999999976 45688999999999997 69999999999999888777665 35799999
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCcEE-eeecceEEEEeecCChhhhHHHHHHHHHHHhcCCCC
Q 003029 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF-EQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPIS 747 (856)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~i-e~k~~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~ 747 (856)
|+.+...++.-.... . .+.+..+++....+..-..+ ..+.....+.+. .+++. .+.+...+ .
T Consensus 68 G~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~-~---- 130 (225)
T d1l6ra_ 68 GGIMFDNDGSIKKFF----S---NEGTNKFLEEMSKRTSMRSILTNRWREASTGFD-IDPED----VDYVRKEA-E---- 130 (225)
T ss_dssp GTEEECTTSCEEESS----C---SHHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEB-CCGGG----HHHHHHHH-H----
T ss_pred ceEEEeCCccEEEec----C---hHHHHHHHHHHHHhcCcceeecccceeeeeccc-cCHHH----HHHHHHHH-h----
Confidence 998875433221222 1 12333444444332211111 011001111111 12221 22233333 1
Q ss_pred CCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC---
Q 003029 748 NASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF--- 824 (856)
Q Consensus 748 ~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~--- 824 (856)
...+.+..+...+||.|++++||.|+++|+++++ ++++++++||| +.||++| |+.+ +.+|.|+|..
T Consensus 131 ~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~------i~~~~v~~~GD-s~nD~~m-~~~a---~~~vav~na~~~~ 199 (225)
T d1l6ra_ 131 SRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYS------LEYDEILVIGD-SNNDMPM-FQLP---VRKACPANATDNI 199 (225)
T ss_dssp TTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTT------CCGGGEEEECC-SGGGHHH-HTSS---SEEEECTTSCHHH
T ss_pred hcCcEEEECCcEEEecCCccchHHHHHHHhhhhc------cchhheeeecC-CcchHHH-HHHC---CeEEEECCCcHHH
Confidence 2356788888999999999999999999999999 67899999999 9999999 8876 6889998752
Q ss_pred ---c-ccc--CCHHHHHHHHHHH
Q 003029 825 ---L-HYL--RMKMCMRFLSQNY 841 (856)
Q Consensus 825 ---~-~~l--~~~~~~~~~l~~~ 841 (856)
+ |=+ ++..-+.++++.|
T Consensus 200 k~~ad~v~~~~~~~gi~~~l~~~ 222 (225)
T d1l6ra_ 200 KAVSDFVSDYSYGEEIGQIFKHF 222 (225)
T ss_dssp HHHCSEECSCCTTHHHHHHHHHT
T ss_pred HHhCCEEECCCCcCHHHHHHHHh
Confidence 2 433 3346666666654
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=3.8e-19 Score=181.57 Aligned_cols=215 Identities=14% Similarity=0.138 Sum_probs=127.7
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc----CceEE
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY----NLWLA 665 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l----~lgli 665 (856)
..||++||+||||+++ +++++++++++|++|++ .| .++++|||+...+...+... ..+++
T Consensus 2 ~~kl~~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~-~g-~~~i~Tgr~~~~~~~~~~~~~~~~~~~~~ 65 (243)
T d2amya1 2 GPALCLFDVDGTLTAP--------------RQKITKEMDDFLQKLRQ-KI-KIGVVGGSDFEKVQEQLGNDVVEKYDYVF 65 (243)
T ss_dssp CSEEEEEESBTTTBCT--------------TSCCCHHHHHHHHHHTT-TS-EEEEECSSCHHHHHHHHCTTHHHHCSEEE
T ss_pred CCEEEEEcCcCCeeCC--------------CCcCCHHHHHHHHHHHc-CC-CEEEEcCCChHHhHHHHhhhccccceEEe
Confidence 3689999999999986 46799999999999975 45 68899999998888777665 34566
Q ss_pred eeCceEEEecCCe-eeecccccCChHHHHHHHHHHHHHHhcCCC-----cEEeeecceEEEEeecC--Chhhh-------
Q 003029 666 AENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPR-----SHFEQRETSLVWNYKYA--DVEFG------- 730 (856)
Q Consensus 666 aenG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt~g-----s~ie~k~~si~~~y~~~--d~e~~------- 730 (856)
+.||+++...++. +...++.................+...... ...+.......+..... +....
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (243)
T d2amya1 66 PENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELD 145 (243)
T ss_dssp SGGGTEEEETTEEEEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHH
T ss_pred cCcEEEEecCCccceecchhHHHHHHHHHHHHhhhhhhheeccccccccchhhhhhhhhcccccccccchhhhhhhhhhh
Confidence 6677776654433 322221111111111111111111111111 11122222222222111 11100
Q ss_pred --HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc----cc
Q 003029 731 --RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG----KN 803 (856)
Q Consensus 731 --~~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~----nD 803 (856)
.....+....+ ........+.+. .+..++||.|+++|||+|+++|+ + ++.++++|||| +. ||
T Consensus 146 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~l~---~------~~~~ev~afGD-~~~~g~ND 214 (243)
T d2amya1 146 KKENIRQKFVADL-RKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVE---N------DGYKTIYFFGD-KTMPGGND 214 (243)
T ss_dssp HHHCHHHHHHHHH-HHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGTT---T------SCCSEEEEEEC-SCC---CC
T ss_pred cchhhhHHHHHHH-HHHhcccceEEEecCCccceeeccccCHHHHHHHHh---C------CCcceEEEEcC-CCCCCCCc
Confidence 01112333333 222233345544 46789999999999999999885 3 45789999999 76 99
Q ss_pred ccccccccccCcceEEeCCCCccccCCHHHHHHHHHHHH
Q 003029 804 CNLPLQFLMQTISTVRLDSSFLHYLRMKMCMRFLSQNYL 842 (856)
Q Consensus 804 e~M~f~~~~~~~~~v~V~~~~~~~l~~~~~~~~~l~~~~ 842 (856)
++| |++++. .++.| .++.++.+++++|+
T Consensus 215 i~M-l~~~g~--~~~~v--------~~~~~~~~~~~~l~ 242 (243)
T d2amya1 215 HEI-FTDPRT--MGYSV--------TAPEDTRRICELLF 242 (243)
T ss_dssp CHH-HHCTTE--EEEEC--------SSHHHHHHHHHHHC
T ss_pred HHH-HHccCC--cEEEe--------CCHHHHHHHHHHHh
Confidence 999 998753 23333 56899999888764
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.79 E-value=6.4e-19 Score=179.05 Aligned_cols=196 Identities=15% Similarity=0.145 Sum_probs=121.8
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC---ceEEee
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN---LWLAAE 667 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~---lgliae 667 (856)
..|||+|+||||++. ...++++++++|++|.+ .|+.|+++|||+...+.+.+..++ .++|++
T Consensus 4 ~~li~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~Gi~~~i~TGR~~~~~~~~~~~~~~~~~~~i~~ 68 (232)
T d1xvia_ 4 PLLVFSDLDGTLLDS--------------HSYDWQPAAPWLTRLRE-ANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAE 68 (232)
T ss_dssp CEEEEEECTTTTSCS--------------SCCSCCTTHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEG
T ss_pred CEEEEEECCCCccCC--------------cCcCCHHHHHHHHHHHH-CCCEEEEEeCCChhhchhHHHHhccCCceEEcc
Confidence 358999999999986 34688999999999986 799999999999999999998874 579999
Q ss_pred CceEEEecCC-eeeeccc---ccCChHHHHHHHHHHHHHHhcCCCcEEee----------------------ecceEEEE
Q 003029 668 NGMFLRCTTG-KWMTTMP---EHLNMEWVDSLKHVFEYFTERTPRSHFEQ----------------------RETSLVWN 721 (856)
Q Consensus 668 nG~~i~~~~~-~w~~~~~---~~~~~~w~~~v~~i~~~~~~rt~gs~ie~----------------------k~~si~~~ 721 (856)
||+.|..... ......+ ......+.............. ....... ........
T Consensus 69 nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
T d1xvia_ 69 NGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHF-KFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLI 147 (232)
T ss_dssp GGTEEECCTTCTTSTTTTEEECSSCHHHHHHHHHHHHHHHCC-CEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEE
T ss_pred CCeEEEecCCccccchhhhhhhHHHHHHHHHhhhhhhhhhcc-ccccccchhhhhhhhhhcccchhhhhhhhcceeeeec
Confidence 9999985221 1000000 111211111111111111000 0000000 00000000
Q ss_pred eecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHh---CcCCcCCCCcceEEEEec
Q 003029 722 YKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEI---VHSKKMKTAIDYVLCIGH 798 (856)
Q Consensus 722 y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l---~~~~~~~~~~d~vla~GD 798 (856)
.. ... .......... . .....+..+...+++.|++++||.|++.|++.+ | ++.++++||||
T Consensus 148 ~~-~~~----~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~K~~~~~~l~~~~~~l~------i~~~~~iafGD 211 (232)
T d1xvia_ 148 WR-DSD----ERMAQFTARL-N----ELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLS------GKRPTTLGLGD 211 (232)
T ss_dssp EC-SCH----HHHHHHHHHH-H----HTTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHHH------SSCCEEEEEES
T ss_pred cc-ccH----HHHHHHHHHh-h----hccceeeeccceeeccCCCchHHHHHHHHHHHHHHcC------CChhcEEEEcC
Confidence 00 010 1111122222 1 123455667778999999999999999999854 5 56889999999
Q ss_pred CCcccccccccccccCcceEEeCCC
Q 003029 799 FLGKNCNLPLQFLMQTISTVRLDSS 823 (856)
Q Consensus 799 ~~~nDe~M~f~~~~~~~~~v~V~~~ 823 (856)
+.||++| |+++ +++|.|.|.
T Consensus 212 -~~NDl~M-l~~a---~~~vaV~n~ 231 (232)
T d1xvia_ 212 -GPNDAPL-LEVM---DYAVIVKGL 231 (232)
T ss_dssp -SGGGHHH-HHTS---SEEEECCCC
T ss_pred -CHhHHHH-HHhC---CeEEEEeCC
Confidence 9999999 8876 678888763
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.76 E-value=1.1e-18 Score=179.06 Aligned_cols=203 Identities=13% Similarity=0.047 Sum_probs=127.8
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC--ceEEeeC
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--lgliaen 668 (856)
+|+||+|+||||+++. .+++++++|++|.+ .|+.|+++|||++..+..++..++ .++|++|
T Consensus 2 iKli~~DlDGTLl~~~----------------~~~~~~~ai~~l~~-~G~~~~~aTGR~~~~~~~~~~~~~~~~~~i~~n 64 (243)
T d1wzca1 2 IRLIFLDIDKTLIPGY----------------EPDPAKPIIEELKD-MGFEIIFNSSKTRAEQEYYRKELEVETPFISEN 64 (243)
T ss_dssp EEEEEECCBTTTBSSS----------------CSGGGHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHTCCSCEEETT
T ss_pred cEEEEEeCCCCCCCCC----------------CCHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHhcccccccccC
Confidence 5899999999999652 24678999999987 699999999999999999999984 4799999
Q ss_pred ceEEEecCCee-eeccc----------ccCChHHHHHHHHHHH---HHHhcCCCcEEe-------------------eec
Q 003029 669 GMFLRCTTGKW-MTTMP----------EHLNMEWVDSLKHVFE---YFTERTPRSHFE-------------------QRE 715 (856)
Q Consensus 669 G~~i~~~~~~w-~~~~~----------~~~~~~w~~~v~~i~~---~~~~rt~gs~ie-------------------~k~ 715 (856)
|+.+...++.. ..... ..... +.+...+. ............ ...
T Consensus 65 Ga~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (243)
T d1wzca1 65 GSAIFIPKGYFPFDVKGKEVGNYIVIELGIRV---EKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMERE 141 (243)
T ss_dssp TTEEEECTTCCC----------CEEEECSCCH---HHHHHHHHHHHHHHTCBCGGGSCHHHHHHHHCCCGGGHHHHTCCS
T ss_pred CcEEEcCCCceecccchhHHHHHHHHHHhhhH---HHHHHHHHhhhhhcccchhhhhhHHHHHHhhcCchhHHHHHHhhh
Confidence 99998633221 00000 00111 11222221 111100000000 000
Q ss_pred ceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEE
Q 003029 716 TSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLC 795 (856)
Q Consensus 716 ~si~~~y~~~d~e~~~~qa~el~~~L~~~~~~~~~v~v~~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla 795 (856)
......... ... ..+.... ..+.+..+ ..+++.|.+++||.|++.++++++. ++.++++|
T Consensus 142 ~~~~~~~~~-~~~-----~~~~~~~--------~~~~~~~~-~~~~~~~~~~~K~~al~~l~~~~~~-----~~~~~~~a 201 (243)
T d1wzca1 142 YSETIFEWS-RDG-----WEEVLVE--------GGFKVTMG-SRFYTVHGNSDKGKAAKILLDFYKR-----LGQIESYA 201 (243)
T ss_dssp SEEEECBCS-SSC-----HHHHHHH--------TTCEEEEC-SSSEEEECSCCHHHHHHHHHHHHHT-----TSCEEEEE
T ss_pred cchhhhhhh-hHH-----HHHhhhh--------cCeEEeec-ccccchhhhhccHHHHHHHHHHhcC-----CCcccEEE
Confidence 000000000 000 0111111 23444444 4478999999999999999999852 45789999
Q ss_pred EecCCcccccccccccccCcceEEeCCCCc---cccCCHHHHHHHH
Q 003029 796 IGHFLGKNCNLPLQFLMQTISTVRLDSSFL---HYLRMKMCMRFLS 838 (856)
Q Consensus 796 ~GD~~~nDe~M~f~~~~~~~~~v~V~~~~~---~~l~~~~~~~~~l 838 (856)
||| +.||++| |+++ +.+|.|+|... -++.+..|+-++.
T Consensus 202 ~GD-~~ND~~M-l~~a---~~~va~~Na~~~~~~~~~~i~~~~~~i 242 (243)
T d1wzca1 202 VGD-SYNDFPM-FEVV---DKVFIVGSLKHKKAQNVSSIIDVLEVI 242 (243)
T ss_dssp EEC-SGGGHHH-HTTS---SEEEEESSCCCTTCEEESCHHHHHHHH
T ss_pred EcC-CHhHHHH-HHcC---CcEEEeCCCChHHHhhhhHHHHHHHhh
Confidence 999 9999999 9877 68999988643 6677777766554
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=4.5e-18 Score=173.09 Aligned_cols=213 Identities=18% Similarity=0.150 Sum_probs=118.4
Q ss_pred eEEE-EecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHH-Hhccc-----CceE
Q 003029 592 RLLI-LGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK-NFQEY-----NLWL 664 (856)
Q Consensus 592 rLI~-lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~-~~~~l-----~lgl 664 (856)
|+|+ ||+||||+++ +.+++++++++|++|.+ .|+ ++++|||....... +...+ ..++
T Consensus 1 k~i~lFDlDGTLl~~--------------~~~is~~~~~~i~~l~~-~g~-~~i~tgrr~~~~~~~~~~~~~~~~~~~~~ 64 (244)
T d2fuea1 1 RVLCLFDVDGTLTPA--------------RQKIDPEVAAFLQKLRS-RVQ-IGVVGGSDYCKIAEQLGDGDEVIEKFDYV 64 (244)
T ss_dssp CEEEEEESBTTTBST--------------TSCCCHHHHHHHHHHTT-TSE-EEEECSSCHHHHHHHHSSTTTHHHHCSEE
T ss_pred CEEEEEccccCccCC--------------CCcCCHHHHHHHHHHHh-CCC-EEEEecCChhhhhhhhhhhhcccccccee
Confidence 4555 5999999987 45789999999999986 575 55666666655444 44433 3578
Q ss_pred EeeCceEEEecCCe-eeecccccCChHHHHHHHHHH-HHHHhcCC----CcEEeeecceEEEEeecCCh------hhhH-
Q 003029 665 AAENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVF-EYFTERTP----RSHFEQRETSLVWNYKYADV------EFGR- 731 (856)
Q Consensus 665 iaenG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~-~~~~~rt~----gs~ie~k~~si~~~y~~~d~------e~~~- 731 (856)
++.||+++...+.. |...+................ ........ ..+.........++...... ++..
T Consensus 65 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (244)
T d2fuea1 65 FAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSEL 144 (244)
T ss_dssp EEGGGTEEEETTEECCCCCHHHHHCHHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHH
T ss_pred ecccceeeccCCccceeechhHHHhhhHHHHHHhhhhhhhheecccccccchhhhhhhhhhccccccccchhhhhhhhhh
Confidence 99999999864332 222111111111111111111 11111111 11111112222222211110 0100
Q ss_pred ----HHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCc----c
Q 003029 732 ----IQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG----K 802 (856)
Q Consensus 732 ----~qa~el~~~L~~~~~~~~~v~v~-~g~~~vEV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~----n 802 (856)
....+....+... .....+.+. .+..++||.|+++|||+|+++|++ ++.++|++||| +. |
T Consensus 145 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lei~~~~vsKg~al~~L~~---------~~~~ev~afGD-~~~~G~N 213 (244)
T d2fuea1 145 DKKEKIREKFVEALKTE-FAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDQ---------DSFDTIHFFGN-ETSPGGN 213 (244)
T ss_dssp HHHHCHHHHHHHHHHHH-TTTSCEEEECCSSSCEEEEETTCSTTHHHHHHTT---------SCCSEEEEEES-CCSTTST
T ss_pred ccchhhHHHHHHHHHHH-hhccceeEeeccCccceecchhccHHHHHHHHhc---------CChhhEEEEcC-CCCCCCC
Confidence 0111122222111 122344444 467899999999999999999875 24789999999 75 9
Q ss_pred cccccccccccCcceEEeCCCCccccCCHHHHHHHHHHHH
Q 003029 803 NCNLPLQFLMQTISTVRLDSSFLHYLRMKMCMRFLSQNYL 842 (856)
Q Consensus 803 De~M~f~~~~~~~~~v~V~~~~~~~l~~~~~~~~~l~~~~ 842 (856)
|++| |+.++. .++.|+ ++.+..+.+..++
T Consensus 214 D~em-l~~a~~--~~~av~--------na~~~~k~~~~~~ 242 (244)
T d2fuea1 214 DFEI-FADPRT--VGHSVV--------SPQDTVQRCREIF 242 (244)
T ss_dssp THHH-HHSTTS--EEEECS--------SHHHHHHHHHHHH
T ss_pred cHHH-HHcCCC--cEEEcC--------CHHHHHHHHHHhc
Confidence 9999 998863 344444 6777777776654
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.73 E-value=1.8e-17 Score=161.62 Aligned_cols=142 Identities=20% Similarity=0.230 Sum_probs=114.1
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEE
Q 003029 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (856)
Q Consensus 364 ~iIl~V~Rld~~KGi~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 443 (856)
.++|+|||+++.||++.+++|++++ |+.+ |+++|..+ +.+.++.+.+++.+. .. ..|+|
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l----~~~~----l~ivg~~~--~~~~~~~~~~~~~~~----~~-------~~v~~ 71 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS--KGDHAERYARKIMKI----AP-------DNVKF 71 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC--TTSTHHHHHHHHHHH----SC-------TTEEE
T ss_pred CEEEEEecCccccCHHHHHHHHHHh----cCCe----EEEEEecc--cccchhhhhhhhccc----cc-------CcEEE
Confidence 5688999999999999999999875 4443 66676543 234444555554432 11 13776
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHH
Q 003029 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAI 521 (856)
Q Consensus 444 ~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l--g~~g~lVnP~d~~~lA~ai 521 (856)
.|.++.+++..+|+.||++++||..||+|++++|||+|+ .|+|+|..+|..+.+ +.+|+++++ |+++++++|
T Consensus 72 -~g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g----~pvi~s~~~~~~e~i~~~~~g~~~~~-d~~~~~~~i 145 (166)
T d2f9fa1 72 -LGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASG----KPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDAM 145 (166)
T ss_dssp -EESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTT----CCEEEESSHHHHHHCCBTTTEEEECS-CHHHHHHHH
T ss_pred -eeccccccccccccccccccccccccccccccccccccc----ccceeecCCcceeeecCCcccccCCC-CHHHHHHHH
Confidence 689999999999999999999999999999999999994 899999999999887 567888865 899999999
Q ss_pred HHHHcCCHHHH
Q 003029 522 ARALNMSPEER 532 (856)
Q Consensus 522 ~~aL~~~~~er 532 (856)
.++++++...+
T Consensus 146 ~~l~~~~~~~~ 156 (166)
T d2f9fa1 146 KKVSKNPDKFK 156 (166)
T ss_dssp HHHHHCTTTTH
T ss_pred HHHHhCHHHHH
Confidence 99999875333
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.83 E-value=5.1e-11 Score=117.31 Aligned_cols=66 Identities=6% Similarity=-0.011 Sum_probs=48.1
Q ss_pred EeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC------Cc-c-ccCCHHHH
Q 003029 763 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS------FL-H-YLRMKMCM 834 (856)
Q Consensus 763 ~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~------~~-~-~l~~~~~~ 834 (856)
.....+|+...+.++++++ +++++|+|||| +.||++| |+++ +++|..++. ++ | -..+..++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~------i~~~eviaiGD-g~NDi~M-l~~A---g~gIAmna~~~v~~~~~~~~~~~~~~d~ 192 (206)
T d1rkua_ 124 VGYQLRQKDPKRQSVIAFK------SLYYRVIAAGD-SYNDTTM-LSEA---HAGILFHAPENVIREFPQFPAVHTYEDL 192 (206)
T ss_dssp EEEECCSSSHHHHHHHHHH------HTTCEEEEEEC-SSTTHHH-HHHS---SEEEEESCCHHHHHHCTTSCEECSHHHH
T ss_pred ccccccchhhHHHHHHHhc------ccccceEEecC-CccCHHH-HHhC---CccEEECCCHHHHHhCCCceeecCHHHH
Confidence 3445677778888899988 56899999999 9999999 8877 677888553 22 3 23566666
Q ss_pred HHHHH
Q 003029 835 RFLSQ 839 (856)
Q Consensus 835 ~~~l~ 839 (856)
.+-|.
T Consensus 193 ~~~~~ 197 (206)
T d1rkua_ 193 KREFL 197 (206)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65443
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.17 E-value=4.2e-06 Score=81.02 Aligned_cols=69 Identities=14% Similarity=0.078 Sum_probs=53.4
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCCC------c-cccCC---HHH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSSF------L-HYLRM---KMC 833 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~~------~-~~l~~---~~~ 833 (856)
....+|..+++.++++++ +++++|++||| +.||.+| |+.+ ++++.+++.. + |=+.. --+
T Consensus 76 ~~~~~K~~~l~~~~~~~~------i~~~~v~~vGD-d~nDl~~-l~~~---g~siap~nA~~~vk~~A~~Vt~~~GG~Ga 144 (177)
T d1k1ea_ 76 LGKLEKETACFDLMKQAG------VTAEQTAYIGD-DSVDLPA-FAAC---GTSFAVADAPIYVKNAVDHVLSTHGGKGA 144 (177)
T ss_dssp ESCSCHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHH-HHHS---SEEEECTTSCHHHHTTSSEECSSCTTTTH
T ss_pred cccccHHHHHHHHHHHhc------CCcceeEEecC-CccHHHH-HhhC---CeEEEcCCccHHHHHhCCEEeCCCCCCch
Confidence 345679999999999999 67899999999 9999999 8765 7888888752 2 44433 336
Q ss_pred HHHHHHHHHH
Q 003029 834 MRFLSQNYLM 843 (856)
Q Consensus 834 ~~~~l~~~~~ 843 (856)
|+++.+-++.
T Consensus 145 vrE~~e~il~ 154 (177)
T d1k1ea_ 145 FREMSDMILQ 154 (177)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888777664
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.05 E-value=5e-06 Score=80.65 Aligned_cols=50 Identities=8% Similarity=0.073 Sum_probs=42.0
Q ss_pred EEEeCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeC
Q 003029 761 EVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLD 821 (856)
Q Consensus 761 EV~p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~ 821 (856)
+....+..|+.++..++++++ ++++.+++||| +.||++| ++++ +.+|.+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~iGD-s~nDi~m-~~~a---g~~va~n 184 (210)
T d1j97a_ 135 GEVLKENAKGEILEKIAKIEG------INLEDTVAVGD-GANDISM-FKKA---GLKIAFC 184 (210)
T ss_dssp CSSCSTTHHHHHHHHHHHHHT------CCGGGEEEEES-SGGGHHH-HHHC---SEEEEES
T ss_pred ccccccccccchhhhHHHHhc------ccccceEEecC-CcChHHH-HHHC---CCCEEEC
Confidence 344567889999999999998 67899999999 9999999 8877 4667774
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=98.01 E-value=8.7e-07 Score=90.71 Aligned_cols=57 Identities=16% Similarity=0.189 Sum_probs=43.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEc---CCCHhhHHHHhcccCc
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYNL 662 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~l~l 662 (856)
++|+|+||+||||.+.. ..+ +.+.++|++|.+ .|..++++| +|+...+.+.+..+++
T Consensus 6 ~ik~vlFDlDGTL~~~~--------------~~i-~~a~e~l~~l~~-~g~~~~~~TN~~~~~~~~~~~~~~~~g~ 65 (261)
T d1vjra_ 6 KIELFILDMDGTFYLDD--------------SLL-PGSLEFLETLKE-KNKRFVFFTNNSSLGAQDYVRKLRNMGV 65 (261)
T ss_dssp GCCEEEECCBTTTEETT--------------EEC-TTHHHHHHHHHH-TTCEEEEEESCTTSCHHHHHHHHHHTTC
T ss_pred hCCEEEEeCCCeeEECC--------------ccC-chHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHHHHhhcc
Confidence 68999999999999762 223 577899999986 799999998 5666666666666554
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=97.96 E-value=9.5e-06 Score=82.42 Aligned_cols=53 Identities=8% Similarity=0.171 Sum_probs=39.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC---CCHhhHHHHhc
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQ 658 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~ 658 (856)
.+|.++||+||||++. ...+ +.+.++|++|.+ .|..++++|+ |+...+.+.+.
T Consensus 1 ~yk~v~fDlDGTL~~~--------------~~~i-~~a~~~i~~l~~-~g~~~~~~Tn~s~~~~~~~~~~L~ 56 (253)
T d1yv9a1 1 DYQGYLIDLDGTIYLG--------------KEPI-PAGKRFVERLQE-KDLPFLFVTNNTTKSPETVAQRLA 56 (253)
T ss_dssp SCCEEEECCBTTTEET--------------TEEC-HHHHHHHHHHHH-TTCCEEEEECCCSSCHHHHHHHHH
T ss_pred CCCEEEEcCCCccEeC--------------CCcC-ccHHHHHHHHHH-CCCCEEEEeCCCCCCHHHHHHHHH
Confidence 3689999999999976 2234 678999999987 6999999975 55555544443
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=97.90 E-value=4.8e-06 Score=82.64 Aligned_cols=65 Identities=12% Similarity=0.025 Sum_probs=48.3
Q ss_pred CHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcceEEeCCC---------CccccCCHHHHHHHH
Q 003029 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTISTVRLDSS---------FLHYLRMKMCMRFLS 838 (856)
Q Consensus 768 nKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~~v~V~~~---------~~~~l~~~~~~~~~l 838 (856)
+|+.++..+++.++ .+++.++++|| +.||+.| ++.+ ++.+.++.- ......+..++...|
T Consensus 145 ~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~Dl~~-a~~A---~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~l 213 (226)
T d2feaa1 145 QCGCCKPSVIHELS------EPNQYIIMIGD-SVTDVEA-AKLS---DLCFARDYLLNECREQNLNHLPYQDFYEIRKEI 213 (226)
T ss_dssp CCSSCHHHHHHHHC------CTTCEEEEEEC-CGGGHHH-HHTC---SEEEECHHHHHHHHHTTCCEECCSSHHHHHHHH
T ss_pred CCHHHHHHHHHHhc------CCCceEEEEeC-chhhHHH-HHHC---CEEEEecchHHHHHHcCCCeeecCCHHHHHHHH
Confidence 56666677778887 56889999999 9999999 7655 456555431 125567888998888
Q ss_pred HHHHH
Q 003029 839 QNYLM 843 (856)
Q Consensus 839 ~~~~~ 843 (856)
++++.
T Consensus 214 ~~~~~ 218 (226)
T d2feaa1 214 ENVKE 218 (226)
T ss_dssp HTSHH
T ss_pred HHHHH
Confidence 87764
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=97.82 E-value=4e-06 Score=85.28 Aligned_cols=56 Identities=14% Similarity=0.236 Sum_probs=44.6
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEc---CCCHhhHHHHhcccC
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYN 661 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~l~ 661 (856)
++|.|+||+||||.+.. ..+ +.+.++|+.|.+ .|..|+++| +|+...+.+.+..++
T Consensus 2 ~ik~VifDlDGTL~~~~--------------~~i-~~a~e~i~~l~~-~g~~~~~~TN~~~~~~~~~~~~l~~~G 60 (250)
T d2c4na1 2 TIKNVICDIDGVLMHDN--------------VAV-PGAAEFLHGIMD-KGLPLVLLTNYPSQTGQDLANRFATAG 60 (250)
T ss_dssp CCCEEEEECBTTTEETT--------------EEC-TTHHHHHHHHHH-TTCCEEEEESCCSCCHHHHHHHHHHTT
T ss_pred CCCEEEEECCCeeEECC--------------CcC-ccHHHHHHHHHH-CCCcEEEEeCCCCCCHHHHHHHHhhcc
Confidence 58999999999999762 223 467899999986 699999987 788888877776654
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.74 E-value=5.5e-05 Score=74.98 Aligned_cols=41 Identities=17% Similarity=0.395 Sum_probs=33.6
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 621 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
..+.|.+.+.|+.|.+ .|.+++|+||-....++.++..+++
T Consensus 81 ~~l~pg~~~~i~~lk~-~G~~~~ivS~~~~~~v~~i~~~lgi 121 (217)
T d1nnla_ 81 PHLTPGIRELVSRLQE-RNVQVFLISGGFRSIVEHVASKLNI 121 (217)
T ss_dssp CCBCTTHHHHHHHHHH-TTCEEEEEEEEEHHHHHHHHHHTTC
T ss_pred cccCHHHHHHHHHHHh-CCCEEEEECCCchHHHHHHHHHhCC
Confidence 3466889999999986 6899999999888888888877754
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.59 E-value=5e-05 Score=70.15 Aligned_cols=59 Identities=17% Similarity=0.133 Sum_probs=44.2
Q ss_pred hcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 003029 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (856)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 649 (856)
.++.|.|+||+||||++..... ..+...-....+-+.+++.|+.|.+ .|..|+++|||+
T Consensus 4 ~~kpk~vifDiDgTL~~~~~~~--~~~~~~~~~~~~~p~v~~~l~~l~~-~G~~Iii~T~R~ 62 (149)
T d1ltqa1 4 PGKPKAVIFDVDGTLAKMNGRG--PYDLEKCDTDVINPMVVELSKMYAL-MGYQIVVVSGRE 62 (149)
T ss_dssp TTSCEEEEEETBTTTBCCSSCC--TTCGGGGGGCCBCHHHHHHHHHHHH-TTCEEEEEECSC
T ss_pred CCCCcEEEEEcCCCcEeCCCCC--cCCccccccCccCHHHHHHHHHHHh-ccCeEEEEecCc
Confidence 4678999999999999764321 0111111245788999999999996 799999999996
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=97.45 E-value=1.5e-05 Score=81.00 Aligned_cols=53 Identities=6% Similarity=0.112 Sum_probs=40.7
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC---CCHhhHHHHhcc
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQE 659 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~ 659 (856)
+|.|+||+||||.+.. . +-+.+.++|++|.+ .|..++++|+ |+...+.+.+..
T Consensus 2 yk~vlFDlDGTL~~~~--------------~-~i~~a~e~l~~l~~-~g~~~~~~TN~s~~~~~~~~~~l~~ 57 (253)
T d1wvia_ 2 YKGYLIDLDGTIYKGK--------------D-RIPAGEDFVKRLQE-RQLPYILVTNNTTRTPEMVQEMLAT 57 (253)
T ss_dssp CCEEEEECBTTTEETT--------------E-ECHHHHHHHHHHHH-HTCCEEEEECCCSSCHHHHHHHHHH
T ss_pred cCEEEEcCcCceEECC--------------C-cCccHHHHHHHHHH-CCCCEEEEeCCCCCCHHHHHHHHHh
Confidence 6899999999998752 2 34778999999886 6999999975 566666666543
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.33 E-value=0.0001 Score=66.38 Aligned_cols=58 Identities=21% Similarity=0.243 Sum_probs=44.3
Q ss_pred EEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHH---HHhcccCc
Q 003029 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD---KNFQEYNL 662 (856)
Q Consensus 594 I~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~---~~~~~l~l 662 (856)
|++|+||||+.... + ...+|-+.+++.|++|.+ .|+.|+|.|+|+....+ .|+..-++
T Consensus 3 i~vDiDGTl~~~~~-~---------~~~kPi~~~Ie~l~~L~~-~G~~IIi~TaR~~~~~~~t~~wL~~~~i 63 (122)
T d2obba1 3 IAVDFDGTIVEHRY-P---------RIGEEIPFAVETLKLLQQ-EKHRLILWSVREGELLDEAIEWCRARGL 63 (122)
T ss_dssp EEECCBTTTBCSCT-T---------SCCCBCTTHHHHHHHHHH-TTCEEEECCSCCHHHHHHHHHHHHTTTC
T ss_pred EEEEcCCCcCCCCC-C---------ccccccHHHHHHHHHHHH-CCCeEEEEecCCCcchHHHHHHHHHcCC
Confidence 79999999987532 2 135677899999999986 69999999999876654 45554333
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.18 E-value=0.00026 Score=63.72 Aligned_cols=49 Identities=18% Similarity=0.232 Sum_probs=39.5
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 649 (856)
|-|+||+||||+...+.. -....|-+.+++.|++|.+ .|++|+|.|+|.
T Consensus 2 K~i~~DiDGTI~~~~~~~--------y~~~~P~~~~Ie~l~~l~~-~G~~Iii~TaR~ 50 (124)
T d1xpja_ 2 KKLIVDLDGTLTQANTSD--------YRNVLPRLDVIEQLREYHQ-LGFEIVISTARN 50 (124)
T ss_dssp CEEEECSTTTTBCCCCSC--------GGGCCBCHHHHHHHHHHHH-TTCEEEEEECTT
T ss_pred CEEEEeCCCCeECCCCCC--------cCccCcCHHHHHHHHHHHH-CCCEEEEEecCC
Confidence 458999999998753210 0256788999999999986 699999999996
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.16 E-value=0.0027 Score=59.34 Aligned_cols=61 Identities=15% Similarity=0.162 Sum_probs=40.2
Q ss_pred CeEEEEecCCccCCCCCCCCCC-------Cccc---cccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhh
Q 003029 591 NRLLILGFNATLTEPVDTPGRR-------GDQI---REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~-------~~~~---~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~ 652 (856)
.|+|+||+||||.+...+-... .... .....++-|.+.++|+.|.+ .|+.++|+|+.+...
T Consensus 5 pK~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~pgv~e~L~~L~~-~G~~~~v~S~~~~~~ 75 (164)
T d1u7pa_ 5 PKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQS-LGVPVAAASRTSEIQ 75 (164)
T ss_dssp CSEEEECCBTTTBSSCTTTTCCSCEEECTTSCEEETTCCEECCCTTHHHHHHHHHH-TTCCEEEEECCSCHH
T ss_pred CCEEEEcCCCcccCCccccccCccHhHHhcchHhhhhccccccchHHHHHHHHHHH-CCCcEEEEeccccch
Confidence 4899999999998642111000 0000 01223567889999999997 699999999765543
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=95.96 E-value=0.0037 Score=58.61 Aligned_cols=54 Identities=17% Similarity=0.212 Sum_probs=38.7
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCC
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR 648 (856)
+|+||||.||||........ .... -....+-|.+.++|++|.+ .|.+++|+|..
T Consensus 2 ~K~i~~D~DGtL~~~~~~~~-~~~~--~~~~~~~pgv~e~L~~L~~-~g~~l~i~TNq 55 (161)
T d2fpwa1 2 QKYLFIDRDGTLISEPPSDF-QVDR--FDKLAFEPGVIPQLLKLQK-AGYKLVMITNQ 55 (161)
T ss_dssp CEEEEECCBTTTBCCC--CC-CCCS--GGGCCBCTTHHHHHHHHHH-TTEEEEEEEEC
T ss_pred CcEEEEeCCCCeEeeCCCCC-ccCC--HHHceECccHHHHHHHHHH-cCCceeeeccc
Confidence 68999999999997642110 0111 1234567899999999997 69999999875
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=95.21 E-value=0.0073 Score=58.14 Aligned_cols=39 Identities=18% Similarity=0.342 Sum_probs=33.1
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
.+-+.+.+.|..|++ .|++++|+||.+...++..+..++
T Consensus 95 ~l~~~~~~~L~~L~~-~g~~~~i~tn~~~~~~~~~l~~~g 133 (224)
T d2hsza1 95 RLYPNVKETLEALKA-QGYILAVVTNKPTKHVQPILTAFG 133 (224)
T ss_dssp EECTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHhc-cCCcccccccccHHHHHHHHHhcC
Confidence 356788999999987 699999999999999888887764
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=95.10 E-value=0.01 Score=56.34 Aligned_cols=53 Identities=9% Similarity=0.091 Sum_probs=40.2
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCH
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~ 650 (856)
++.||||.||||..+.+.. .+ ..+-++-|.+.++|+.|.+ .|..++|+|..+.
T Consensus 2 ~~Av~~DrDGtl~~~~~y~----~~--~~~~~~~~gv~e~l~~L~~-~g~~~~ivTNq~~ 54 (182)
T d2gmwa1 2 VPAIFLDRDGTINVDHGYV----HE--IDNFEFIDGVIDAMRELKK-MGFALVVVTNQSG 54 (182)
T ss_dssp BCEEEECSBTTTBCCCSSC----CS--GGGCCBCTTHHHHHHHHHH-TTCEEEEEEECTH
T ss_pred CCEEEEeCCCCccCCCCCC----CC--HHHeeECCCHHHHHHHHhh-cCchhhhhhccch
Confidence 5789999999998653211 11 1344677889999999997 7999999999763
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=95.05 E-value=0.0034 Score=61.26 Aligned_cols=51 Identities=6% Similarity=-0.031 Sum_probs=38.1
Q ss_pred CCcceEEEEecCCcccccccccccccCc-ceEEeCCC-----------CccccCCHHHHHHHHHHHHH
Q 003029 788 TAIDYVLCIGHFLGKNCNLPLQFLMQTI-STVRLDSS-----------FLHYLRMKMCMRFLSQNYLM 843 (856)
Q Consensus 788 ~~~d~vla~GD~~~nDe~M~f~~~~~~~-~~v~V~~~-----------~~~~l~~~~~~~~~l~~~~~ 843 (856)
++++.+++||| +.+|+.+ +...| .+|.|... +.|-+.+..++.++|+++++
T Consensus 166 ~~p~~~l~VGD-~~~Di~a----A~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l~~l~~ 228 (228)
T d2hcfa1 166 YSPSQIVIIGD-TEHDIRC----ARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLASILT 228 (228)
T ss_dssp CCGGGEEEEES-SHHHHHH----HHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHHHHHC
T ss_pred CChhHheeecC-ChHHHHH----HHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHHHHHHHHHHHhC
Confidence 56889999999 9999777 44444 45666421 23889999999999999874
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=95.00 E-value=0.2 Score=51.40 Aligned_cols=102 Identities=11% Similarity=0.052 Sum_probs=64.5
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCc--------hhhc--cCCeEEECCC-
Q 003029 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA--------AQSL--GAGAILVNPW- 512 (856)
Q Consensus 444 ~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~--------~~~l--g~~g~lVnP~- 512 (856)
+.+++++.+ ++..||+||..+ |.| +..|||+|+ .|+|+.-+.+- ++.+ ...|+.+++.
T Consensus 274 i~~~~p~~~---ll~~a~~~v~hg---G~~-t~~Eal~~G----~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~~ 342 (391)
T d1pn3a_ 274 VVGEVNLQE---LFGRVAAAIHHD---SAG-TTLLAMRAG----IPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPV 342 (391)
T ss_dssp EESSCCHHH---HHTTSSCEEEES---CHH-HHHHHHHHT----CCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCSS
T ss_pred EecccCHHH---HHhhccEEEecC---chH-HHHHHHHhC----CcEEEeccccCCcchHHHHHHHHHHCCCEEEcCcCC
Confidence 467888665 467899999764 444 688999994 88888776653 3333 1357888775
Q ss_pred -CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 003029 513 -NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (856)
Q Consensus 513 -d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l 559 (856)
++++++++|.++|+.+- +++.+++.+.+.......-++.+.+.|
T Consensus 343 ~~~~~l~~~i~~~l~~~~---r~~a~~~a~~~~~~g~~~aa~~i~~~l 387 (391)
T d1pn3a_ 343 PTIDSLSAALDTALAPEI---RARATTVADTIRADGTTVAAQLLFDAV 387 (391)
T ss_dssp CCHHHHHHHHHHHTSTTH---HHHHHHHGGGSCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCHHH---HHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 48999999999996432 233334434443333334344333333
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=94.29 E-value=0.017 Score=55.21 Aligned_cols=38 Identities=18% Similarity=0.394 Sum_probs=30.0
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
.+-|.+.+.|+.|++ +..++|+|+.....+...+..++
T Consensus 82 ~~~~g~~~~L~~l~~--~~~~~ivT~~~~~~~~~~l~~~~ 119 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS--ELRLGIVTSQRRNELESGMRSYP 119 (207)
T ss_dssp EECTTHHHHHHHSCT--TSEEEEECSSCHHHHHHHHTTSG
T ss_pred ccccchhhhhhhhcc--ccccccccccccccccccccccc
Confidence 355678899999863 68889999998888888887754
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=94.12 E-value=0.015 Score=56.61 Aligned_cols=53 Identities=19% Similarity=0.313 Sum_probs=39.8
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 003029 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (856)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 649 (856)
+.+.||||.||||..+.+-+. ...+-++-|.+.++|++|.+ .|..++|+|..+
T Consensus 22 ~~~Aif~DrDGtl~~~~~y~~------~~~~~~l~pgv~e~L~~L~~-~G~~l~IvTNQ~ 74 (209)
T d2o2xa1 22 HLPALFLDRDGTINVDTDYPS------DPAEIVLRPQMLPAIATANR-AGIPVVVVTNQS 74 (209)
T ss_dssp SCCCEEECSBTTTBCCCSCTT------CGGGCCBCGGGHHHHHHHHH-HTCCEEEEEECH
T ss_pred CCCEEEEeCCCCeECCCCCCC------CHHHeEecccHHHHHHHHHh-hCCeEEEecccc
Confidence 467899999999987543221 11244677899999999986 799999999753
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=94.05 E-value=0.031 Score=53.46 Aligned_cols=39 Identities=18% Similarity=0.284 Sum_probs=32.8
Q ss_pred CChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 623 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
+-|.+.++|+.|.+ .|..++|+|+.+...+...++.+++
T Consensus 89 ~~pg~~~~l~~L~~-~g~~~~i~T~~~~~~~~~~l~~~~l 127 (218)
T d1te2a_ 89 LLPGVREAVALCKE-QGLLVGLASASPLHMLEKVLTMFDL 127 (218)
T ss_dssp BCTTHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHHHTTC
T ss_pred ccchHHHHHHHhhh-ccccccccccccccccccccccccc
Confidence 45778999999986 6999999999999998888877653
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=93.60 E-value=4.7 Score=41.47 Aligned_cols=242 Identities=15% Similarity=0.123 Sum_probs=140.1
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCchhhhhcCcccHHHHHHh--hcCCEEEEeCHHHHHHH
Q 003029 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV--LAADLVGFHTYDYARHF 302 (856)
Q Consensus 225 i~~~~~~~DvIwvHDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~fr~lp~~~~il~~l--l~aDlIgf~t~~~~~~F 302 (856)
+....+| |+|.||.=-.-.++..+.....++||++ +|--..+.++.. |..++..|-. -.+|+---.|..+.++.
T Consensus 83 ~l~~~kP-D~vlv~GDr~e~la~a~aa~~~~ipi~H-iegG~rsg~~~~--~~~de~~R~~iskls~~hf~~t~~~~~~L 158 (373)
T d1v4va_ 83 ALKEMGA-DYVLVHGDTLTTFAVAWAAFLEGIPVGH-VEAGLRSGNLKE--PFPEEANRRLTDVLTDLDFAPTPLAKANL 158 (373)
T ss_dssp HHHHTTC-SEEEEESSCHHHHHHHHHHHHTTCCEEE-ETCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHH
T ss_pred hhhhcCc-ccccccccCccchhHHHHHHHhhhhhee-eccccccccccc--Ccchhhhhhhhccccceeeecchhhhhhh
Confidence 3444455 8999988666666666666667888875 232222223322 2334444432 24666666666666665
Q ss_pred HHHHHHHhCcccCCCceeeCCeeEEEEEe-ecccChhhhhhhhcCCchHHHHHHHHH---H-hcCCceEEEeecccccCC
Q 003029 303 VSACTRILGFEGTPEGVEDQGRLTRVAAF-PIGIDSERFIRALEINPVQVHIKELQE---T-FAGRKVMLGVDRLDMIKG 377 (856)
Q Consensus 303 l~~~~~~lg~~~~~~~v~~~g~~~~v~vi-P~GID~~~f~~~~~~~~~~~~~~~lr~---~-~~~~~iIl~V~Rld~~KG 377 (856)
++ .|.+ ..+|.++ -+++|. +... ..+.+ . ..++.+++..-|....+.
T Consensus 159 ~~-----~Ge~-----------~~~I~~vG~p~~D~--i~~~----------~~~~~~~~~~~~~~~~lvt~hr~~n~~~ 210 (373)
T d1v4va_ 159 LK-----EGKR-----------EEGILVTGQTGVDA--VLLA----------AKLGRLPEGLPEGPYVTVTMHRRENWPL 210 (373)
T ss_dssp HT-----TTCC-----------GGGEEECCCHHHHH--HHHH----------HHHCCCCTTCCSSCEEEECCCCGGGGGG
T ss_pred hh-----hccc-----------ccceeecccchhhH--HHhh----------hhhcccccccccccceeEEeccccccch
Confidence 43 1221 1122222 123432 1110 00000 0 124566777888888888
Q ss_pred hHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHH
Q 003029 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 457 (856)
Q Consensus 378 i~~~L~Af~~~l~~~P~~~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~g~v~~~el~aly 457 (856)
....+.++..+.+..++.. ++... +. . +.. +..+.+.. . . ...+.+ ...+++.++..++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~----~i~p~-~~--~-~~~---~~~~~~~~---~-~-----~~n~~~-~~~l~~~~~l~ll 269 (373)
T d1v4va_ 211 LSDLAQALKRVAEAFPHLT----FVYPV-HL--N-PVV---REAVFPVL---K-G-----VRNFVL-LDPLEYGSMAALM 269 (373)
T ss_dssp HHHHHHHHHHHHHHCTTSE----EEEEC-CS--C-HHH---HHHHHHHH---T-T-----CTTEEE-ECCCCHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcccce----eeeee-cc--c-ccc---hhhhhhhh---c-c-----ccccee-eccchHHHHHHHh
Confidence 8889999998888876642 33222 21 1 211 12222221 1 1 124664 6789999999999
Q ss_pred HHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCCchhh-ccCCeEEECCCCHHHHHHHHHHHHcCC
Q 003029 458 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS-LGAGAILVNPWNITEVANAIARALNMS 528 (856)
Q Consensus 458 ~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~-lg~~g~lVnP~d~~~lA~ai~~aL~~~ 528 (856)
+.|++++-.| |-...||.+.+ .|+|.-...|-.+. +..+..++-+.|.+++..+|..+|..+
T Consensus 270 ~~s~~vignS-----ssgi~Ea~~lg----~P~Inir~~~eRqeg~~~g~nvlv~~d~~~I~~~i~~~l~~~ 332 (373)
T d1v4va_ 270 RASLLLVTDS-----GGLQEEGAALG----VPVVVLRNVTERPEGLKAGILKLAGTDPEGVYRVVKGLLENP 332 (373)
T ss_dssp HTEEEEEESC-----HHHHHHHHHTT----CCEEECSSSCSCHHHHHHTSEEECCSCHHHHHHHHHHHHTCH
T ss_pred hhceeEeccc-----chhhhcchhhc----CcEEEeCCCccCHHHHhcCeeEEcCCCHHHHHHHHHHHHcCH
Confidence 9999988777 35678999994 77776656565553 322333344569999999999999753
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=93.05 E-value=0.044 Score=51.45 Aligned_cols=38 Identities=13% Similarity=0.198 Sum_probs=29.1
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
.+-+.+.+.|++|++ .|..++|+|+.+...+ +.+..++
T Consensus 79 ~~~~gv~~~l~~l~~-~g~~~~i~Sn~~~~~~-~~l~~~~ 116 (187)
T d2fi1a1 79 ILFEGVSDLLEDISN-QGGRHFLVSHRNDQVL-EILEKTS 116 (187)
T ss_dssp CBCTTHHHHHHHHHH-TTCEEEEECSSCTHHH-HHHHHTT
T ss_pred cccchhHHHHHHHHh-hhccccccccCccchh-hhhhhhc
Confidence 445678999999987 6999999999877655 4566654
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.94 E-value=0.03 Score=53.78 Aligned_cols=57 Identities=12% Similarity=0.155 Sum_probs=37.7
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCC
Q 003029 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (856)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR 648 (856)
.+.|+++||.||||......- ... ..+..-..+.+.+.++|+.|.+ .|..|+|+|--
T Consensus 19 ~~~Kia~fDrDGtLik~~~~~-~~~-~~~~d~~~l~~~v~~~i~~L~~-~gy~iiIvTNQ 75 (195)
T d1yj5a1 19 PQGKVAAFDLDGTLITTRSGK-VFP-TSPSDWRILYPEIPKKLQELAA-EGYKLVIFTNQ 75 (195)
T ss_dssp CCSCEEEECSBTTTEECSSSC-SSC-SSTTCCEESCTTHHHHHHHHHH-HTCEEEEEEEC
T ss_pred CcCcEEEEECCCceEeeCCCC-cCC-CChhhceeccCCHHHHHHHHHh-CCcEEEEecCc
Confidence 457899999999998542100 000 0000111256889999999986 69999999975
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=91.92 E-value=0.075 Score=52.20 Aligned_cols=38 Identities=18% Similarity=0.165 Sum_probs=25.9
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhccc
Q 003029 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (856)
Q Consensus 622 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (856)
.+-+.+.+.|+.|.+ .|+.++|+||.+...++..+..+
T Consensus 99 ~~~~g~~~~L~~Lk~-~g~~i~i~Tn~~~~~~~~~l~~~ 136 (257)
T d1swva_ 99 SPINGVKEVIASLRE-RGIKIGSTTGYTREMMDIVAKEA 136 (257)
T ss_dssp CBCTTHHHHHHHHHH-TTCEEEEBCSSCHHHHHHHHHHH
T ss_pred ccCCcHHHHHHHHHh-cccceeecCCCchhhHHHHHHHH
Confidence 355667777777775 47777777777777766666554
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=91.40 E-value=0.1 Score=50.65 Aligned_cols=60 Identities=7% Similarity=-0.087 Sum_probs=42.1
Q ss_pred HHHHHHHHHhCcCCcCCCCcceEEEEecCCc-ccccccccccccCcc-eEE-eCCC----------CccccCCHHHHHHH
Q 003029 771 AAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KNCNLPLQFLMQTIS-TVR-LDSS----------FLHYLRMKMCMRFL 837 (856)
Q Consensus 771 ~av~~ll~~l~~~~~~~~~~d~vla~GD~~~-nDe~M~f~~~~~~~~-~v~-V~~~----------~~~~l~~~~~~~~~ 837 (856)
...+.+++++| .++++++.||| +. +|+.+ +...|+ ++. +... +.|.+.+..++.++
T Consensus 168 ~~~~~~~~~~~------~~~~~~l~iGD-~~~~Di~~----A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~eL~~l 236 (247)
T d2gfha1 168 SIFYHCCDLLG------VQPGDCVMVGD-TLETDIQG----GLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPAL 236 (247)
T ss_dssp HHHHHHHHHHT------CCGGGEEEEES-CTTTHHHH----HHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHH
T ss_pred hhHHHHHHHhh------cCHHhcceecc-ChHhHHHH----HHHcCCeEEEEECCCCCCcccccCCCCEEECCHHHHHHH
Confidence 35566777777 56889999999 85 78777 555554 243 3211 12889999999999
Q ss_pred HHHH
Q 003029 838 SQNY 841 (856)
Q Consensus 838 l~~~ 841 (856)
|+++
T Consensus 237 l~~i 240 (247)
T d2gfha1 237 LQSI 240 (247)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9876
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=91.38 E-value=0.15 Score=45.68 Aligned_cols=58 Identities=19% Similarity=0.188 Sum_probs=48.0
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
...+++|-+||++-... -.+.+.+.++|+.|.+ .|+.|+|+||.........-+.+++
T Consensus 3 ~~~~~~d~~~~~~~g~~-------------D~lr~~a~~~I~~L~~-~Gi~v~ilTGD~~~~a~~ia~~lgI 60 (135)
T d2b8ea1 3 VTAVIFDKTGTLTKGKP-------------DTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISRELNL 60 (135)
T ss_dssp CCEEEEECCCCCBCSCC-------------CCBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTC
T ss_pred EEEEEECCceEEEEecC-------------CCCCccHHHHHHHHHH-cCCEEEEEcCcchhhhhHHHhhhhh
Confidence 35799999999986532 2367789999999986 7999999999999999888888765
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=90.98 E-value=0.085 Score=49.76 Aligned_cols=60 Identities=12% Similarity=0.071 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCc-ceEEeCCCC---ccccCCHHHHHHHHH
Q 003029 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTI-STVRLDSSF---LHYLRMKMCMRFLSQ 839 (856)
Q Consensus 769 KG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~-~~v~V~~~~---~~~l~~~~~~~~~l~ 839 (856)
|....+.++++++ ++++.++.||| +.+|..+ ++..| .+|.|.... .|.+.+..++.++++
T Consensus 139 ~~~~~~~~~~~~~------~~p~~~l~VgD-~~~Di~~----A~~~G~~~i~v~~~~~~~~~~~~~~~dl~~l~~ 202 (204)
T d2go7a1 139 SPEAATYLLDKYQ------LNSDNTYYIGD-RTLDVEF----AQNSGIQSINFLESTYEGNHRIQALADISRIFE 202 (204)
T ss_dssp SSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHH----HHHHTCEEEESSCCSCTTEEECSSTTHHHHHTS
T ss_pred hHHHHHHHHHHhC------CCCceEEEEeC-CHHHHHH----HHHcCCeEEEEcCCCCCcCeecCCHHHHHHHhc
Confidence 4566677788888 67899999999 8899777 44434 477776543 399999999887764
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=90.84 E-value=0.21 Score=47.72 Aligned_cols=38 Identities=8% Similarity=0.102 Sum_probs=29.6
Q ss_pred CChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccC
Q 003029 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (856)
Q Consensus 623 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (856)
+-|.+.+.|++|++ .|++++|+|+.+.......+...+
T Consensus 128 ~~pg~~e~l~~L~~-~g~~l~i~Tn~~~~~~~~~~~~~~ 165 (253)
T d1zs9a1 128 FFADVVPAVRKWRE-AGMKVYIYSSGSVEAQKLLFGHST 165 (253)
T ss_dssp CCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHTBT
T ss_pred cCCCHHHHHHHHhh-ccCceeecCCCcHHHHHHHHHHcC
Confidence 44678888999876 689999999998888776666543
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=90.01 E-value=0.5 Score=48.15 Aligned_cols=90 Identities=14% Similarity=0.062 Sum_probs=60.4
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC----chhhc--cCCeEEECCC--
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG----~~~~l--g~~g~lVnP~-- 512 (856)
++ +.+++++.+ +|..+|+||. -|-..++.|+++++ .|+|+--+.+ .+..+ ...|+.+++.
T Consensus 287 v~-~~~~~p~~~---~l~~~~~~V~----hgG~~t~~Eal~~G----vP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~ 354 (401)
T d1iira_ 287 CF-AIGEVNHQV---LFGRVAAVIH----HGGAGTTHVAARAG----APQILLPQMADQPYYAGRVAELGVGVAHDGPIP 354 (401)
T ss_dssp EE-ECSSCCHHH---HGGGSSEEEE----CCCHHHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSC
T ss_pred EE-EEeccCHHH---HHhhcCEEEe----cCCchHHHHHHHhC----CCEEEccccccHHHHHHHHHHCCCEEEcCcCCC
Confidence 54 478888654 5678999983 56677788999994 7888866655 22223 1357888775
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Q 003029 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTT 545 (856)
Q Consensus 513 d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~ 545 (856)
++++++++|.++|+ + +-+++.+++.+.++.
T Consensus 355 ~~~~l~~ai~~~l~--~-~~~~~a~~~~~~~~~ 384 (401)
T d1iira_ 355 TFDSLSAALATALT--P-ETHARATAVAGTIRT 384 (401)
T ss_dssp CHHHHHHHHHHHTS--H-HHHHHHHHHHHHSCS
T ss_pred CHHHHHHHHHHHhC--H-HHHHHHHHHHHHHHh
Confidence 69999999999995 3 233344444444433
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=88.41 E-value=0.31 Score=45.22 Aligned_cols=57 Identities=9% Similarity=0.158 Sum_probs=46.5
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCHhhHHHHhcccCc
Q 003029 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (856)
Q Consensus 592 rLI~lD~DGTL~~~~~~p~~~~~~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (856)
-++++|.+|||+-..-+| |-+.+.++|+.|.+ .|+.|+++||-...........+++
T Consensus 3 ~~~~~d~~~~~~~~~~Dp-------------~R~~~~~~I~~l~~-~GI~v~miTGD~~~tA~~ia~~~Gi 59 (168)
T d1wpga2 3 SVICSDKTGTLTTNQLDP-------------PRKEVMGSIQLCRD-AGIRVIMITGDNKGTAIAICRRIGI 59 (168)
T ss_dssp CEEEECCTTTTBCCCECC-------------BCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTTS
T ss_pred EEEEECCccEEEEEecCC-------------CchhHHHHHHHHHH-CcCEEEEECCCCHHHHHHHHHHcCC
Confidence 368889999998663233 56789999999986 6999999999999999888877653
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=88.24 E-value=0.12 Score=49.89 Aligned_cols=72 Identities=10% Similarity=0.022 Sum_probs=49.2
Q ss_pred chHHHHHHHHhcCCeEEEEecCCccCCCCCC---------CCCCCccc------------cccccCCChhHHHHHHHhhc
Q 003029 578 READSIERYLRSNNRLLILGFNATLTEPVDT---------PGRRGDQI------------REMELKLHPDLKQPLNALCH 636 (856)
Q Consensus 578 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~---------p~~~~~~~------------~~~~~~~s~~~~~~L~~L~~ 636 (856)
.+.++.+++..-+...|+||+|-|++++.+- |.. .+.+ .+..+.+-+-+++.|+.+.+
T Consensus 22 ~~~~i~~~~~g~~P~AIifDIDETvLdnspy~~~~~~~~~~~~-~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~~ 100 (209)
T d2b82a1 22 SVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPES-EDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVR 100 (209)
T ss_dssp CHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTS-SGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHH
T ss_pred EHHHHHHhcCCCCCceEEEcchhhhhcCcHHHHhhhhhcCcCc-ccccCCCcchHHHhcccccccCcchhHHHHHHHHHH
Confidence 5667777777666668999999999986320 100 0000 01224456689999999986
Q ss_pred CCCCeEEEEcCCCHh
Q 003029 637 DPKTTIVVLSGSDRN 651 (856)
Q Consensus 637 d~g~~V~I~SGR~~~ 651 (856)
+|.+|+.+|||+..
T Consensus 101 -~Gv~IfyVTnR~~~ 114 (209)
T d2b82a1 101 -RGDAIFFVTGRSPT 114 (209)
T ss_dssp -HTCEEEEEECSCCC
T ss_pred -cCCeEEEEeCCchh
Confidence 79999999999743
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=87.64 E-value=17 Score=41.03 Aligned_cols=148 Identities=16% Similarity=0.138 Sum_probs=100.4
Q ss_pred CCceEEEeecccccCChHHHHHHHHHH---HHhCcCc-cCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003029 362 GRKVMLGVDRLDMIKGIPQKLLAFEKF---LEENSDW-RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~~L~Af~~~---l~~~P~~-~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (856)
+..++.++=|+..-|--...+.-..++ ++.+|+. +..+++|..|-...++.+ -+++-+.+.+++..||..=-..+
T Consensus 525 ~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~~-gK~iIk~I~~va~~in~dp~~~~ 603 (796)
T d1l5wa_ 525 QAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYL-AKNIIFAINKVADVINNDPLVGD 603 (796)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHH-HHHHHHHHHHHHHHHHTCTTTGG
T ss_pred hhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCCchHH-HHHHHHHHHHHHHHhcCChhhcc
Confidence 556888999999999988866655544 3344432 124777766655444433 34566677777777775200001
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc-----cCCeEEEC
Q 003029 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVN 510 (856)
Q Consensus 438 ~~pV~~~~g~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l-----g~~g~lVn 510 (856)
.-.|+|+ ...+-+--..+..+|||.+.+|. .|.-|..-+=|+.- |++.+|..-|.--++ +.+|+++-
T Consensus 604 ~~kVVFl-enYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalN-----G~lnlstlDGw~vE~~~~vg~eN~f~fG 677 (796)
T d1l5wa_ 604 KLKVVFL-PDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN-----GALTVGTLDGANVEIAEKVGEENIFIFG 677 (796)
T ss_dssp GEEEEEC-SSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred ceeEEEe-CCCchHHHHHHhcccchhhhCCCCCcccCCchHHHHHHc-----CCeeeecccchHHHHHHhcCccceEEec
Confidence 2247765 45577777888999999999998 59999888888874 899999999986554 46888883
Q ss_pred CCCHHHH
Q 003029 511 PWNITEV 517 (856)
Q Consensus 511 P~d~~~l 517 (856)
.+.+++
T Consensus 678 -~~~~ev 683 (796)
T d1l5wa_ 678 -HTVEQV 683 (796)
T ss_dssp -CCHHHH
T ss_pred -CchHHH
Confidence 344443
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=86.59 E-value=0.5 Score=48.41 Aligned_cols=101 Identities=14% Similarity=0.041 Sum_probs=65.6
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHhhcCCCCceEEEeCCCC----chhhc--cCCeEEECCC--
Q 003029 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (856)
Q Consensus 441 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~lVlSe~aG----~~~~l--g~~g~lVnP~-- 512 (856)
+. +.+++++.++ +..+|+||. .|-..++.||++++ .|+|+.-+.+ .+..+ ...|+.+++.
T Consensus 288 v~-~~~~~p~~~l---l~~~~~~I~----hgG~~t~~Eal~~G----vP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~ 355 (401)
T d1rrva_ 288 CF-AIDEVNFQAL---FRRVAAVIH----HGSAGTEHVATRAG----VPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTP 355 (401)
T ss_dssp EE-EESSCCHHHH---GGGSSEEEE----CCCHHHHHHHHHHT----CCEEECCCSBTHHHHHHHHHHHTSEEECSSSCC
T ss_pred EE-EEeccCcHHH---hhhccEEEe----cCCchHHHHHHHhC----CCEEEecccccHHHHHHHHHHCCCEEEcCcCCC
Confidence 54 4778887655 567999984 55566789999994 7888877766 23333 1348888875
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 003029 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 556 (856)
Q Consensus 513 d~~~lA~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl 556 (856)
+++.++++|.++|+ + +.+++.++..+.+.......-++..+
T Consensus 356 ~~~~L~~ai~~vl~--~-~~r~~a~~~~~~~~~~g~~~aa~~ie 396 (401)
T d1rrva_ 356 TFESLSAALTTVLA--P-ETRARAEAVAGMVLTDGAAAAADLVL 396 (401)
T ss_dssp CHHHHHHHHHHHTS--H-HHHHHHHHHTTTCCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhC--H-HHHHHHHHHHHHHhhcCHHHHHHHHH
Confidence 58999999999995 3 33444444444444444444343333
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=86.34 E-value=26 Score=39.43 Aligned_cols=147 Identities=10% Similarity=0.080 Sum_probs=98.1
Q ss_pred CCceEEEeecccccCChHHHHHH----HHHHHHhCcCc-cCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCC
Q 003029 362 GRKVMLGVDRLDMIKGIPQKLLA----FEKFLEENSDW-RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 436 (856)
Q Consensus 362 ~~~iIl~V~Rld~~KGi~~~L~A----f~~~l~~~P~~-~~~v~Lv~v~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~ 436 (856)
+..+++++-|+..-|--...+.- +.++. +.|+. ...+++|..|-...++.. -+++-+.+.+++.-||..=...
T Consensus 549 ~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk-~~~~~~~~P~q~IFaGKAhP~d~~-gK~iIk~I~~va~~in~dp~~~ 626 (824)
T d2gj4a1 549 NSLFDVQVKRIHEYKRQLLNCLHVITLYNRIK-KEPNKFVVPRTVMIGGKAAPGYHM-AKMIIKLITAIGDVVNHDPVVG 626 (824)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHH-HCTTSCCCCEEEEEECCCCTTCHH-HHHHHHHHHHHHHHHTTCTTTG
T ss_pred chhhhhheeechhhhhhhhhHhhHHHHHHHhh-hcccCCCCCeEEEEeCCCCCccHH-HHHHHHHHHHHHHHHhcChhhc
Confidence 56788899999999988774443 34443 34432 224777766654444433 3455667777777677531111
Q ss_pred CcccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHhhcCCCCceEEEeCCCCchhhc-----cCCeEEE
Q 003029 437 TAVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILV 509 (856)
Q Consensus 437 ~~~pV~~~~g~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~lEama~~~~~~g~lVlSe~aG~~~~l-----g~~g~lV 509 (856)
+.-.|+|+. ..+-.--..++.+|||.+.+|+ .|.=|..-+=||.- |++.+|..-|+--++ +.+|+++
T Consensus 627 ~~lkVvFle-nY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alN-----Gal~lstlDGwnvEi~~~vg~~N~~~f 700 (824)
T d2gj4a1 627 DRLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN-----GALTIGTMDGANVEMAEEAGEENFFIF 700 (824)
T ss_dssp GGEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEEC
T ss_pred cceeEEEcC-CCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHc-----CCeeeccccchHHHHHHhcCcccEEEe
Confidence 223578755 5577777889999999999998 58888888888774 899999999985443 4678887
Q ss_pred CCCCHHHH
Q 003029 510 NPWNITEV 517 (856)
Q Consensus 510 nP~d~~~l 517 (856)
-. ..+++
T Consensus 701 G~-~~~ev 707 (824)
T d2gj4a1 701 GM-RVEDV 707 (824)
T ss_dssp SC-CHHHH
T ss_pred CC-Chhhh
Confidence 43 34443
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=83.95 E-value=0.17 Score=47.45 Aligned_cols=15 Identities=20% Similarity=0.397 Sum_probs=12.4
Q ss_pred CeEEEEecCCccCCC
Q 003029 591 NRLLILGFNATLTEP 605 (856)
Q Consensus 591 ~rLI~lD~DGTL~~~ 605 (856)
+++++||+||||++.
T Consensus 1 ~~a~iFD~DGTL~ds 15 (204)
T d2go7a1 1 KTAFIWDLDGTLLDS 15 (204)
T ss_dssp CCEEEECTBTTTEEC
T ss_pred CEEEEEcCCCcCccC
Confidence 357888999999975
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.04 E-value=0.65 Score=43.44 Aligned_cols=30 Identities=10% Similarity=0.209 Sum_probs=23.6
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCCH
Q 003029 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (856)
Q Consensus 621 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~ 650 (856)
..|-+..+++|++|.+..+..|+|+|.|+.
T Consensus 73 L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~ 102 (195)
T d1q92a_ 73 LEPLPGAVEAVKEMASLQNTDVFICTSPIK 102 (195)
T ss_dssp CCBCTTHHHHHHHHHHSTTEEEEEEECCCS
T ss_pred CCcccCHHHHHHHHhhccCccceEEccccc
Confidence 356678999999998755567889999864
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=80.57 E-value=0.38 Score=46.83 Aligned_cols=44 Identities=9% Similarity=0.089 Sum_probs=35.6
Q ss_pred CCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccC-cceEEe
Q 003029 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQT-ISTVRL 820 (856)
Q Consensus 767 vnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~-~~~v~V 820 (856)
-.|..+++.+++..+ .++.+|+|| +.+|.+| |+.+++. |+.|.-
T Consensus 184 g~k~~i~~~~~~~~~--------~~~~~~VGD-SITDve~-Lr~~r~~gGlaIsF 228 (308)
T d1y8aa1 184 GEKAKIMRGYCESKG--------IDFPVVVGD-SISDYKM-FEAARGLGGVAIAF 228 (308)
T ss_dssp HHHHHHHHHHHHHHT--------CSSCEEEEC-SGGGHHH-HHHHHHTTCEEEEE
T ss_pred chhHHHHHhhccccc--------CCcceeccC-ccccHHH-HHHHhcCCCeeEEe
Confidence 457777777887776 345699999 9999999 9999985 777776
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=80.54 E-value=0.2 Score=47.05 Aligned_cols=65 Identities=12% Similarity=-0.017 Sum_probs=47.1
Q ss_pred eCCCCHHHHHHHHHHHhCcCCcCCCCcceEEEEecCCcccccccccccccCcc-eEEeCCC---------C-c-cccCCH
Q 003029 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKNCNLPLQFLMQTIS-TVRLDSS---------F-L-HYLRMK 831 (856)
Q Consensus 764 p~gvnKG~av~~ll~~l~~~~~~~~~~d~vla~GD~~~nDe~M~f~~~~~~~~-~v~V~~~---------~-~-~~l~~~ 831 (856)
..+-.|...+.+++++++ .++++++.||| +.+|+.+ +...|+ +|.|... . + |-+.+.
T Consensus 134 ~~~~~~p~~~~~~~~~~~------~~~~~~v~VGD-s~~Di~a----a~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l 202 (210)
T d2ah5a1 134 PEAPHKADVIHQALQTHQ------LAPEQAIIIGD-TKFDMLG----ARETGIQKLAITWGFGEQADLLNYQPDYIAHKP 202 (210)
T ss_dssp SSCCSHHHHHHHHHHHTT------CCGGGEEEEES-SHHHHHH----HHHHTCEEEEESSSSSCHHHHHTTCCSEEESST
T ss_pred ccccccccccchhhhhhh------cccccceeecC-CHHHHHH----HHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCH
Confidence 346688899999999998 67899999999 9999777 444443 6666421 1 2 667777
Q ss_pred HHHHHHHH
Q 003029 832 MCMRFLSQ 839 (856)
Q Consensus 832 ~~~~~~l~ 839 (856)
.++..+||
T Consensus 203 ~el~~~le 210 (210)
T d2ah5a1 203 LEVLAYFQ 210 (210)
T ss_dssp THHHHHTC
T ss_pred HHHHHHhC
Confidence 77766653
|