Citrus Sinensis ID: 003042
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 854 | 2.2.26 [Sep-21-2011] | |||||||
| Q9ZV48 | 862 | Probable alpha,alpha-treh | yes | no | 0.968 | 0.959 | 0.688 | 0.0 | |
| Q94AH8 | 860 | Alpha,alpha-trehalose-pho | no | no | 0.971 | 0.965 | 0.641 | 0.0 | |
| Q9LRA7 | 867 | Probable alpha,alpha-treh | no | no | 0.989 | 0.974 | 0.617 | 0.0 | |
| Q0WUI9 | 856 | Probable alpha,alpha-treh | no | no | 0.969 | 0.967 | 0.628 | 0.0 | |
| O80738 | 861 | Probable alpha,alpha-treh | no | no | 0.971 | 0.963 | 0.624 | 0.0 | |
| O23617 | 862 | Alpha,alpha-trehalose-pho | no | no | 0.971 | 0.962 | 0.619 | 0.0 | |
| Q9LMI0 | 851 | Probable alpha,alpha-treh | no | no | 0.985 | 0.989 | 0.598 | 0.0 | |
| Q54K57 | 733 | Alpha,alpha-trehalose-pho | yes | no | 0.833 | 0.971 | 0.349 | 1e-135 | |
| Q9FZ57 | 822 | Probable alpha,alpha-treh | no | no | 0.884 | 0.918 | 0.341 | 1e-122 | |
| Q9SYM4 | 942 | Alpha,alpha-trehalose-pho | no | no | 0.827 | 0.750 | 0.348 | 1e-119 |
| >sp|Q9ZV48|TPS11_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 OS=Arabidopsis thaliana GN=TPS11 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1191 bits (3081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/841 (68%), Positives = 684/841 (81%), Gaps = 14/841 (1%)
Query: 6 DLLNLISFDDFGTL--NRIP-GVMKVPGVISEFENKSNDGTTTIVEPCQRRIIVANQLPV 62
D L+L+S DD+ + NRIP V K+ G+ E +G + +P +RI+V+NQLP+
Sbjct: 8 DQLSLVSADDYRIMGRNRIPNAVTKLSGL----ETDDPNGGAWVTKP--KRIVVSNQLPL 61
Query: 63 KAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKF 122
+A+ + SNKW FE+D DSLYLQLKDGFP ETEV+YVGSLN ++ +QE+VS LLEKF
Sbjct: 62 RAHRDISSNKWCFEFDNDSLYLQLKDGFPPETEVVYVGSLNADVLPSEQEDVSQFLLEKF 121
Query: 123 KCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADK 182
+CVPTFLP+D+ KYYHGFCKHYLWP+FHY+LP+T + G+ FDR W+AY + NK+FADK
Sbjct: 122 QCVPTFLPSDLLNKYYHGFCKHYLWPIFHYLLPMTQAQGSLFDRSNWRAYTTVNKIFADK 181
Query: 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILK 242
+ EV+NPD+DYVWIHDYHLM+LP+FLR RFHR+K+G FLHSPFPSSEIYRTLPVRDEILK
Sbjct: 182 IFEVLNPDDDYVWIHDYHLMILPTFLRNRFHRIKLGIFLHSPFPSSEIYRTLPVRDEILK 241
Query: 243 SLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQ 302
LN DL+GFHTFDYARHFLS CSRMLGL+YESKRGYIGL+YFGRTVSIKILPVGIHMGQ
Sbjct: 242 GFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTVSIKILPVGIHMGQ 301
Query: 303 FESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKV 362
ESI + + T +KVK L+E+F G IV+LGVDD+D+FKGISLKF AMGQLLEQ+ +LRGKV
Sbjct: 302 IESIKASEKTAEKVKRLRERFKGNIVMLGVDDLDMFKGISLKFWAMGQLLEQNEELRGKV 361
Query: 363 VLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKP-GYEPIVIIKEPLSTQDKVPYYA 421
VLVQITNPARSSGKDVQD+ N IA+EIN FG+P GY+PIV I P+ST DKV YYA
Sbjct: 362 VLVQITNPARSSGKDVQDVEKQINLIADEINSKFGRPGGYKPIVFINGPVSTLDKVAYYA 421
Query: 422 IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS 481
I+EC VVN VRDGMNLVPYKYTV+RQGSP LD ALG E + +KSVIIVSEFIGCSPS
Sbjct: 422 ISECVVVNAVRDGMNLVPYKYTVTRQGSPALDAALGFGEDD--VRKSVIIVSEFIGCSPS 479
Query: 482 LSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541
LSGAIRVNPWN+DAV +AM SA+ M ++EK LRH+KH+KYISSH+VAYWA+S DQDL+RA
Sbjct: 480 LSGAIRVNPWNIDAVTNAMSSAMTMSDKEKNLRHQKHHKYISSHNVAYWARSYDQDLQRA 539
Query: 542 CRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTS 601
C+DH KR WGVG GL F++VAL P FR+L I AY +++SRLILLDYDGT+M Q +
Sbjct: 540 CKDHYNKRFWGVGFGLFFKVVALDPNFRRLCGETIVPAYRRSSSRLILLDYDGTMMDQDT 599
Query: 602 EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKN 661
DKRPS +++S+LN LC+DP N VFIVSGRGKD L WF LG+SAEHGYFTRW+ N
Sbjct: 600 LDKRPSDDLISLLNRLCDDPSNLVFIVSGRGKDPLSKWFDSCPNLGISAEHGYFTRWNSN 659
Query: 662 SAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKEL 721
S WE L D WK+IA+PVM Y E TDGSFIE+KE+A+VWHHQ AD FGS QAKEL
Sbjct: 660 SPWETSELPADLSWKKIAKPVMNHYMEATDGSFIEEKESAMVWHHQEADHSFGSWQAKEL 719
Query: 722 LDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMR-SRGKSPDFVLCIGDDR 780
LDHLE+VL NEPVVVKRGQHIVEVKPQGVSKG VV++LI+TMR ++GK PDF+LCIGDDR
Sbjct: 720 LDHLESVLTNEPVVVKRGQHIVEVKPQGVSKGKVVEHLIATMRNTKGKRPDFLLCIGDDR 779
Query: 781 SDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATESVHS 840
SDEDMF+SI + D S G+ EVFACTVGQKPS AKYYLDDT VI +LE LA+ S S
Sbjct: 780 SDEDMFDSIVKH-QDVSSIGLEEVFACTVGQKPSKAKYYLDDTPSVIKMLEWLASASDGS 838
Query: 841 K 841
K
Sbjct: 839 K 839
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 5 |
| >sp|Q94AH8|TPS6_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 OS=Arabidopsis thaliana GN=TPS6 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1136 bits (2939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/853 (64%), Positives = 663/853 (77%), Gaps = 23/853 (2%)
Query: 2 RSSLDLLNLISFDD--FGTLNR-IPGVMKVPGVISEFENKSNDGTTTIVEPCQRRIIVAN 58
RS +LL L S D FG +NR IP +M V G++S +N S D T + P R IIVAN
Sbjct: 4 RSYSNLLELASGDSPTFGRMNRQIPRIMAVAGIMSNIDNDSKD---TDLSPKDRIIIVAN 60
Query: 59 QLPVKAYYEKDSNK-------------WGFEYDQDSLYLQLKDGFPLET-EVIYVGSLNV 104
+LP++A D N W F +D++SL LQLKDG E EVIYVG L
Sbjct: 61 ELPIRAQRRVDGNGSGSSSSSTCCSKGWNFSWDENSLLLQLKDGLGDEAIEVIYVGCLKE 120
Query: 105 EIGVDDQEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARF 164
EI +++QEEV ILLE FKCVPTFLP D++ +YYHGFCK LWPLFHYMLPL+ G RF
Sbjct: 121 EIPLNEQEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYMLPLSPDLGGRF 180
Query: 165 DRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSP 224
DR WQAY+S NK+FAD++MEVINP++D+VWIHDYHLMVLP+FLRKRF+RVK+GFFLHSP
Sbjct: 181 DRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSP 240
Query: 225 FPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDY 284
FPSSEIY+TLP+R+E+L++LLNSDLIGFHTFDYARHFLS CSRMLGL YESKRGYIGL+Y
Sbjct: 241 FPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEY 300
Query: 285 FGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVDDMDLFKGIS 342
+GRTVSIKILPVGIHMGQ +S++SL T +KV EL E++ G+ ++LGVDDMD+FKGI+
Sbjct: 301 YGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDDMDIFKGIT 360
Query: 343 LKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402
LK LAM QLL QHP+ +GKVVLVQI NPAR GKDV+++ ++T + IN FG+PGY+
Sbjct: 361 LKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINETFGRPGYD 420
Query: 403 PIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKN 462
PIV+I PL ++V YY +AECC+V VRDGMNL+PY+Y VSRQG+ LD+ L + E N
Sbjct: 421 PIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNEKLDKILKL-EAN 479
Query: 463 PPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI 522
KKS+++VSEFIGCSPSLSGAIRVNPWNVDAVADAMDSAL++ EK LRHEKHYKY+
Sbjct: 480 NRNKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALEVAEPEKQLRHEKHYKYV 539
Query: 523 SSHDVAYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNK 582
S+HDV YWA+S QDLER+C +H +RCWG+G GL FR+VAL FRKL M HI SAY +
Sbjct: 540 STHDVGYWARSFLQDLERSCGEHGRRRCWGIGFGLSFRVVALDQSFRKLSMEHIVSAYKR 599
Query: 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642
T +R ILLDYD T+MPQ S DKRPS++ + ILN LC D N VFIVS + +++L +WFS
Sbjct: 600 TKTRAILLDYDDTLMPQGSIDKRPSSKSIDILNTLCRDKGNLVFIVSAKSRETLSDWFSP 659
Query: 643 VEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAI 702
EKLG++AEHGYF R K WE C D WK+IAEPVM+LYTETTDGS IEDKETA+
Sbjct: 660 CEKLGIAAEHGYFLRLRKAVEWENCVAAVDCSWKQIAEPVMELYTETTDGSTIEDKETAL 719
Query: 703 VWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLIST 762
VW ++ ADP FGSCQAKELLDHLE+VLANEPV VKRGQ+ VEVKPQGVSKG++ + ++S
Sbjct: 720 VWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQGVSKGLIARRMLSM 779
Query: 763 MRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDD 822
M+ RG P+FVLCIGDDRSDEDMFE I + PS+ AE+FACTVGQKPS AKYYLDD
Sbjct: 780 MQERGTLPEFVLCIGDDRSDEDMFEVICSSTEGPSIAPRAEIFACTVGQKPSKAKYYLDD 839
Query: 823 TAEVINLLEGLAT 835
T E++ L+ GLA+
Sbjct: 840 TTEIVRLMHGLAS 852
|
Regulates plant architecture, shape of epidermal pavement cells and branching of trichomes. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9LRA7|TPS9_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 OS=Arabidopsis thaliana GN=TPS9 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1127 bits (2915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/853 (61%), Positives = 664/853 (77%), Gaps = 8/853 (0%)
Query: 2 RSSLDLLNLISFD--DFGTLNR-IPGVMKVPGVISEFENKSNDGTTTIVEPC---QRRII 55
RS + L+L S+D DF R +P VM VPG+ISE + +DG++ + +R+II
Sbjct: 4 RSCANFLDLASWDLLDFPQTQRALPRVMTVPGIISELDGGYSDGSSDVNSSNSSRERKII 63
Query: 56 VANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVS 115
VAN LP++A + ++ +W F +D+DSL LQL+DGF +TE +Y+GSLN +IG+ +QEEVS
Sbjct: 64 VANMLPLQAKRDTETGQWCFSWDEDSLLLQLRDGFSSDTEFVYIGSLNADIGISEQEEVS 123
Query: 116 TILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSA 175
LL F CVPTFLP ++ +K+Y GFCKH+LWPLFHYMLP+ HG RFDR WQAY+SA
Sbjct: 124 HKLLLDFNCVPTFLPKEMQEKFYLGFCKHHLWPLFHYMLPMFPDHGDRFDRRLWQAYVSA 183
Query: 176 NKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLP 235
NK+F+D+VMEVINP+EDYVWIHDYHLMVLP+FLRKRF+R+K+GFFLHSPFPSSEIYRTLP
Sbjct: 184 NKIFSDRVMEVINPEEDYVWIHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLP 243
Query: 236 VRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILP 295
VRD++L+ LLN DLIGFHTFDYARHFLS CSRMLGL+YESKRG+IGLDYFGRTV IKILP
Sbjct: 244 VRDDLLRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFIKILP 303
Query: 296 VGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQH 355
VGIHMG+ ES+++L T K+KE++E+F GK +ILGVDDMD+FKGISLK +AM +L E +
Sbjct: 304 VGIHMGRLESVLNLPSTAAKMKEIQEQFKGKKLILGVDDMDIFKGISLKLIAMERLFETY 363
Query: 356 PDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQD 415
+RGK+VL+QI NPAR++GKDV++ +T A+ IN +G GY+P+++I + +
Sbjct: 364 WHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINERYGSAGYQPVILIDRLVPRYE 423
Query: 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF 475
K YYA+A+CC+VN VRDGMNLVPYKY + RQG+P +D+A+G+ + + S+++VSEF
Sbjct: 424 KTAYYAMADCCLVNAVRDGMNLVPYKYIICRQGTPGMDKAMGISHDS--ARTSMLVVSEF 481
Query: 476 IGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSID 535
IGCSPSLSGAIRVNPW+VDAVA+A++ AL M EK LRHEKHY Y+S+HDV YWAKS
Sbjct: 482 IGCSPSLSGAIRVNPWDVDAVAEAVNLALTMGETEKRLRHEKHYHYVSTHDVGYWAKSFM 541
Query: 536 QDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGT 595
QDLERACR+H KRCWG+G GL FR+++L P FRKL + HI S Y T R I LDYDGT
Sbjct: 542 QDLERACREHYNKRCWGIGFGLSFRVLSLSPSFRKLSIDHIVSTYRNTQRRAIFLDYDGT 601
Query: 596 VMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYF 655
++P++S K P+ EVLS+L LC DPKN VF+VSGRG +SL +W S E LG++AEHGYF
Sbjct: 602 LVPESSIIKTPNAEVLSVLKSLCGDPKNTVFVVSGRGWESLSDWLSPCENLGIAAEHGYF 661
Query: 656 TRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGS 715
RWS WE C + + +WK + EPVM+ Y + TDGS IE KE+A+VWHHQ ADP FG+
Sbjct: 662 IRWSSKKEWETCYSSAEAEWKTMVEPVMRSYMDATDGSTIEYKESALVWHHQDADPDFGA 721
Query: 716 CQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLC 775
CQAKELLDHLE+VLANEPVVVKRGQHIVEVKPQGVSKG+ V+ +I M G PD V+C
Sbjct: 722 CQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAVEKVIHQMVEDGNPPDMVMC 781
Query: 776 IGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLAT 835
IGDDRSDEDMFESI V +P +P E+FACTVG+KPS AKY+LDD ++V+ LL GLA
Sbjct: 782 IGDDRSDEDMFESILSTVTNPDLPMPPEIFACTVGRKPSKAKYFLDDVSDVLKLLGGLAA 841
Query: 836 ESVHSKSASYQES 848
+ SK Q+S
Sbjct: 842 ATSSSKPEYQQQS 854
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q0WUI9|TPS8_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8 OS=Arabidopsis thaliana GN=TPS8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1105 bits (2857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/837 (62%), Positives = 646/837 (77%), Gaps = 9/837 (1%)
Query: 2 RSSLDLLNLISFD--DFGTLNR-IPGVMKVPGVISEFE-NKSNDGTTTIVEPCQRRIIVA 57
RS + L+L S+D DF R +P VM VPG+I++ + + +++ T+T +R+IIVA
Sbjct: 4 RSCANFLDLSSWDLLDFPQTPRTLPRVMTVPGIITDVDGDTTSEVTSTSGGSRERKIIVA 63
Query: 58 NQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTI 117
N LP+++ + ++ KW F +D+DSL LQL+DGF ETE +YVGSLNV+I ++QEEVS
Sbjct: 64 NMLPLQSKRDAETGKWCFNWDEDSLQLQLRDGFSSETEFLYVGSLNVDIETNEQEEVSQK 123
Query: 118 LLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANK 177
LLE+F CV TFL ++ + +Y GFCKH LWPLFHYMLP+ HG RFDR WQAY+SANK
Sbjct: 124 LLEEFNCVATFLSQELQEMFYLGFCKHQLWPLFHYMLPMFPDHGDRFDRRLWQAYVSANK 183
Query: 178 VFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR 237
+F+D+VMEVINP++DYVWI DYHLMVLP+FLRKRF+R+K+GFFLHSPFPSSEIYRTLPVR
Sbjct: 184 IFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVR 243
Query: 238 DEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVG 297
DEIL+ LLN DLIGFHTFDYARHFLS CSRMLGL+YESKRG+IGLDYFGRTV IKILPVG
Sbjct: 244 DEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVG 303
Query: 298 IHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPD 357
+HMG+ ES++SLD T K KE++E+F GK ++LG+DDMD+FKGISLK +AM L E +
Sbjct: 304 VHMGRLESVLSLDSTAAKTKEIQEQFKGKKLVLGIDDMDIFKGISLKLIAMEHLFETYWH 363
Query: 358 LRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417
L+GKVVLVQI NPARSSGKDV++ +T A IN +G Y+PIV+I + +K
Sbjct: 364 LKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINERYGTSDYKPIVLIDRLVPRSEKT 423
Query: 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG 477
YYA A+CC+VN VRDGMNLVPYKY V RQG+ V + +P + S ++VSEFIG
Sbjct: 424 AYYAAADCCLVNAVRDGMNLVPYKYIVCRQGT---RSNKAVVDSSP--RTSTLVVSEFIG 478
Query: 478 CSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQD 537
CSPSLSGAIRVNPW+VDAVA+A++SAL+M EK LRHEKHY YIS+HDV YWAKS QD
Sbjct: 479 CSPSLSGAIRVNPWDVDAVAEAVNSALKMSETEKQLRHEKHYHYISTHDVGYWAKSFMQD 538
Query: 538 LERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVM 597
LERACRDH KRCWG+G GLGFR+++L P FRKL + HI Y KT R I LDYDGT++
Sbjct: 539 LERACRDHYSKRCWGIGFGLGFRVLSLSPSFRKLSVEHIVPVYRKTQRRAIFLDYDGTLV 598
Query: 598 PQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTR 657
P++S + PS EV+S+L LC DP N VFIVSGRG++SL NW S E LG++AEHGYF R
Sbjct: 599 PESSIVQDPSNEVVSVLKALCEDPNNTVFIVSGRGRESLSNWLSPCENLGIAAEHGYFIR 658
Query: 658 WSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQ 717
W WE C D +W+ + EPVM+ Y E TDG+ IE KE+A+VWHHQ ADP FGSCQ
Sbjct: 659 WKSKDEWETCYSPTDTEWRSMVEPVMRSYMEATDGTSIEFKESALVWHHQDADPDFGSCQ 718
Query: 718 AKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIG 777
AKE+LDHLE+VLANEPVVVKRGQHIVEVKPQGVSKG+ + +I M RG+ P+ V+CIG
Sbjct: 719 AKEMLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAAEKVIREMVERGEPPEMVMCIG 778
Query: 778 DDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLA 834
DDRSDEDMFESI V +P + EVFACTVG+KPS AKY+LDD A+V+ LL GL
Sbjct: 779 DDRSDEDMFESILSTVTNPELLVQPEVFACTVGRKPSKAKYFLDDEADVLKLLRGLG 835
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|O80738|TPS10_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1104 bits (2856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/838 (62%), Positives = 647/838 (77%), Gaps = 8/838 (0%)
Query: 6 DLLNLISFDDFG---TLNRIPGVMKVPGVISEFENKS-NDGTTTIVE-PC-QRRIIVANQ 59
+LL+L S D T +P VM VPG+IS+ + +DG + ++ PC +R+IIVAN
Sbjct: 8 NLLDLASGDLLDIPQTPRYLPRVMTVPGIISDVDGYGISDGDSDVISLPCRERKIIVANF 67
Query: 60 LPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILL 119
LP+ + ++ KW F D DS L LKDGF ETEVIYVGSL + V +Q+EVS L
Sbjct: 68 LPLNGKKDSETGKWKFSLDNDSPLLHLKDGFSPETEVIYVGSLKTHVDVSEQDEVSHNLF 127
Query: 120 EKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVF 179
E+F CV TFLP DVHKK+Y GFCK LWPLFHYMLP+ HG RFDRG WQAY+SANK+F
Sbjct: 128 EEFNCVATFLPQDVHKKFYLGFCKQQLWPLFHYMLPMCPDHGERFDRGLWQAYVSANKIF 187
Query: 180 ADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDE 239
ADKVM VIN +EDY+WIHDYHLMVLP+FLR+RFHRVK+GFFLHSPFPSSEIYRTLPVR+E
Sbjct: 188 ADKVMGVINLEEDYIWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVREE 247
Query: 240 ILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIH 299
+L+ LLN DLIGFHTFDYARHFLS C RMLGL YESKRG+I LDY GRTV +KILP+GIH
Sbjct: 248 LLRGLLNCDLIGFHTFDYARHFLSCCCRMLGLEYESKRGHIALDYLGRTVFLKILPIGIH 307
Query: 300 MGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLR 359
MG+ ES+++L T +K+KE++EK+ GK +ILGVDDMD+FKG+SLK LA LL+Q+P +
Sbjct: 308 MGRLESVLNLPATAEKLKEIQEKYRGKKIILGVDDMDIFKGLSLKILAFEHLLQQYPSML 367
Query: 360 GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPY 419
GK+VL+QI NPAR SGKDVQ+ +T + IN +G YEP+V+I P+ +K Y
Sbjct: 368 GKIVLIQIVNPARGSGKDVQEARKETYDTVKRINERYGSHDYEPVVLIDRPVPRFEKSAY 427
Query: 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS 479
YA+AECC+VN VRDGMNLVPYKYTV RQG+P ++++LGV + P + S +++SEFIGCS
Sbjct: 428 YALAECCIVNAVRDGMNLVPYKYTVCRQGTPSMNKSLGVSDDLP--RTSTLVLSEFIGCS 485
Query: 480 PSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539
PSLSGAIRVNPW+VDAVAD++ SA+ M + EK LRH+KH+ YIS+HDV YWA+S QDLE
Sbjct: 486 PSLSGAIRVNPWDVDAVADSLYSAITMSDFEKQLRHKKHFHYISTHDVGYWARSFSQDLE 545
Query: 540 RACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQ 599
RA RDH KRCWGVG GLGFR+VAL P FR+L + SAY +++ R I LDYDGT++P+
Sbjct: 546 RASRDHYSKRCWGVGWGLGFRLVALSPNFRRLSIEQTVSAYRRSSKRAIFLDYDGTLVPE 605
Query: 600 TSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWS 659
TS K PS EV+S L LC+DP N +FIVSGRGK SL W + E LG++AEHGYFTRW+
Sbjct: 606 TSIVKDPSAEVISALKALCSDPNNTIFIVSGRGKVSLSEWLAPCENLGIAAEHGYFTRWN 665
Query: 660 KNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAK 719
K+S WE L+ D +WK++ EP+M+LYTETTDGS IE KE+A+VWHHQ ADP FGSCQAK
Sbjct: 666 KSSDWETSGLSDDLEWKKVVEPIMRLYTETTDGSNIEAKESALVWHHQDADPDFGSCQAK 725
Query: 720 ELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDD 779
ELLDHLE VL NEPV+V RG IVEVKPQGVSKG+V ++S M G +PDFV+CIGDD
Sbjct: 726 ELLDHLETVLVNEPVIVNRGHQIVEVKPQGVSKGLVTGKILSRMLEDGIAPDFVVCIGDD 785
Query: 780 RSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATES 837
RSDE+MFE+I ++ S E+FACTVG+KPS AKY+LD+ ++V+ LL+GLA S
Sbjct: 786 RSDEEMFENISTTLSAQSSSMSTEIFACTVGRKPSKAKYFLDEVSDVVKLLQGLANTS 843
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|O23617|TPS5_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 OS=Arabidopsis thaliana GN=TPS5 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1098 bits (2841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/840 (61%), Positives = 651/840 (77%), Gaps = 10/840 (1%)
Query: 2 RSSLDLLNLIS--FDDFGT-LNRIPGVMKVPGVISEFENKSNDGTTTIVEPCQ----RRI 54
RS +LL+L S F F R P V V GV+SE ++ +N + P R I
Sbjct: 4 RSYSNLLDLASGNFHSFSREKKRFPRVATVTGVLSELDDDNNSNSVCSDAPSSVTQDRII 63
Query: 55 IVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEV 114
IV NQLP+K++ + K F +D DSL LQLKDG + EV+Y+G L +I +Q++V
Sbjct: 64 IVGNQLPIKSH-RNSAGKLSFSWDNDSLLLQLKDGMREDMEVVYIGCLKEQIDTVEQDDV 122
Query: 115 STILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLS 174
S LLE FKCVP ++P ++ KYYHGFCK +LWPLFHYMLPLT G RFDR WQAYLS
Sbjct: 123 SQRLLENFKCVPAYIPPELFTKYYHGFCKQHLWPLFHYMLPLTPDLGGRFDRSLWQAYLS 182
Query: 175 ANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTL 234
NK+FADKVMEVI+PD+D+VW+HDYHLMVLP+FLRKRF+RVK+GFFLHSPFPSSEIYRTL
Sbjct: 183 VNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTL 242
Query: 235 PVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKIL 294
PVR+E+L++LLN+DLIGFHTFDYARHFLS CSRMLGL+Y+SKRG IGL+Y+GRTVSIKIL
Sbjct: 243 PVRNELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYQSKRGTIGLEYYGRTVSIKIL 302
Query: 295 PVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQ 354
PVGIH+ Q +SI++L T KV EL+++F + V+LGVDDMD+FKGISLK LAM QLL Q
Sbjct: 303 PVGIHISQLQSILNLPETQTKVAELRDQFLDQKVLLGVDDMDIFKGISLKLLAMEQLLTQ 362
Query: 355 HPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQ 414
HP+ RG+VVLVQI NPAR GKDVQ++ S+T + IN FG+PGY+P+V+I PL
Sbjct: 363 HPEKRGRVVLVQIANPARGRGKDVQEVQSETEATVKRINEMFGRPGYQPVVLIDTPLQFF 422
Query: 415 DKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSE 474
+++ YY IAECC+V VRDGMNL+PY+Y + RQG+P L+ +G+D KKS+++VSE
Sbjct: 423 ERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNPKLNETIGLDPS--AAKKSMLVVSE 480
Query: 475 FIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSI 534
FIGCSPSLSGAIRVNPWN+DAV +AMD AL + EK +RHEKH+KY+S+HDVAYWA+S
Sbjct: 481 FIGCSPSLSGAIRVNPWNIDAVTEAMDYALIVSEAEKQMRHEKHHKYVSTHDVAYWARSF 540
Query: 535 DQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDG 594
QDLERAC DH+ KRCWG+G GLGFR+VAL P F+KL + HI SAY +T +R ILLDYDG
Sbjct: 541 IQDLERACGDHVRKRCWGIGFGLGFRVVALDPSFKKLSIEHIVSAYKRTKNRAILLDYDG 600
Query: 595 TVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGY 654
T++ S P+ E + ILN+L +DPKN V++VSG+ + +L WFS + LGL AEHGY
Sbjct: 601 TMVQPGSIRTTPTRETIEILNNLSSDPKNIVYLVSGKDRRTLTEWFSSCDDLGLGAEHGY 660
Query: 655 FTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFG 714
F R + + WE SL F+WK+IAEPVM+LYTETTDGS IE KETA+VW++Q ADP FG
Sbjct: 661 FIRPNDGTDWETSSLVSGFEWKQIAEPVMRLYTETTDGSTIETKETALVWNYQFADPDFG 720
Query: 715 SCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVL 774
SCQAKEL++HLE+VL N+PV VK GQ +VEVKPQGV+KG+V + L++TM+ +GK DF+L
Sbjct: 721 SCQAKELMEHLESVLTNDPVSVKTGQQLVEVKPQGVNKGLVAERLLTTMQEKGKLLDFIL 780
Query: 775 CIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLA 834
C+GDDRSDEDMFE I A P++ +AE+FACTVGQKPS AKYYLDDTAE+I +L+GLA
Sbjct: 781 CVGDDRSDEDMFEVIMSAKDGPALSPVAEIFACTVGQKPSKAKYYLDDTAEIIRMLDGLA 840
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9LMI0|TPS7_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 OS=Arabidopsis thaliana GN=TPS7 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1066 bits (2758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/857 (59%), Positives = 641/857 (74%), Gaps = 15/857 (1%)
Query: 2 RSSLDLLNLIS--FDDFGT-LNRIPGVMKVPGVISEFENKS---NDGTTTIVEPCQRRII 55
RS +LL+L S F G R+P VM VPG +SEF+ R II
Sbjct: 4 RSYTNLLDLASGNFPVMGRERRRLPRVMTVPGNVSEFDEDQAYSVSSDNPSSVSSDRMII 63
Query: 56 VANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVS 115
VAN+LP+KA EK + W F +DQDSLYLQLKDG P + E++YVGSL+V++ ++Q++V+
Sbjct: 64 VANRLPLKA--EKRNGSWSFSWDQDSLYLQLKDGLPEDMEILYVGSLSVDVDSNEQDDVA 121
Query: 116 TILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSA 175
ILL+KFKCVPTF P D+ K+Y GFCK +WPLFHYMLP +A HG RFDR W+AY++
Sbjct: 122 QILLDKFKCVPTFFPPDLQSKFYDGFCKRQIWPLFHYMLPFSADHGGRFDRSLWEAYVAT 181
Query: 176 NKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLP 235
NK+F KV+EVINPD+D+VWIHDYHLMVLP+FLR+RF+R+++GFFLHSPFPSSEIYR+LP
Sbjct: 182 NKLFFQKVIEVINPDDDFVWIHDYHLMVLPTFLRRRFNRIRMGFFLHSPFPSSEIYRSLP 241
Query: 236 VRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILP 295
VR+EILK+LLNSDLIGFHTFDYARHFL+ CSRMLGL Y+SKRGYIGL+Y+GRTV IKI+P
Sbjct: 242 VREEILKALLNSDLIGFHTFDYARHFLTCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMP 301
Query: 296 VGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQH 355
VGI+MG+ +S+M KV EL+ +F+GK V+LG+DDMD+FKGI+LK LAM Q+L QH
Sbjct: 302 VGINMGRIQSVMRYSEEEGKVMELRNRFEGKTVLLGIDDMDIFKGINLKLLAMEQMLRQH 361
Query: 356 PDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQD 415
P+ RG+ VLVQI NPAR G DV+++ + IN FGKPGY+PI+ I P+S +
Sbjct: 362 PNWRGRAVLVQIVNPARGKGIDVEEIRGEIEESCRRINGEFGKPGYQPIIYIDTPVSINE 421
Query: 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF 475
YY IAEC VV VRDGMNL PY+Y V RQG LG + KKS+++ SEF
Sbjct: 422 INAYYHIAECVVVTAVRDGMNLTPYEYIVCRQG------LLGSESDFSGPKKSMLVASEF 475
Query: 476 IGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSID 535
IGCSPSLSGAIRVNPWNV+A +A++ AL M + EK LRHEKH++Y+S+HDVAYW++S
Sbjct: 476 IGCSPSLSGAIRVNPWNVEATGEALNEALSMSDAEKQLRHEKHFRYVSTHDVAYWSRSFL 535
Query: 536 QDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGT 595
QDLER C DH KRCWG+G+ GFR+VAL P FRKL + I S Y + SR ILLDYDGT
Sbjct: 536 QDLERICVDHFKKRCWGMGISFGFRVVALDPNFRKLSIPCIVSDYKRAKSRAILLDYDGT 595
Query: 596 VMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYF 655
+MPQ S +K PS EVL+ L+ LC D KN++FIVSGRG++SL WF+ +K+G++AEHGYF
Sbjct: 596 LMPQNSINKAPSQEVLNFLDALCEDKKNSIFIVSGRGRESLSKWFTPCKKIGIAAEHGYF 655
Query: 656 TRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGS 715
+WS + WE C + DF W +I EPVMK YTE+TDGS IE KE+A+VW ++ ADP FGS
Sbjct: 656 LKWSGSEEWETCGQSSDFGWMQIVEPVMKQYTESTDGSSIEIKESALVWQYRDADPGFGS 715
Query: 716 CQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLC 775
QAKE+L+HLE+VLANEPV VK G +IVEVKPQGVSKG V + + S+M +GK DFVLC
Sbjct: 716 LQAKEMLEHLESVLANEPVAVKSGHYIVEVKPQGVSKGSVSEKIFSSMAGKGKPVDFVLC 775
Query: 776 IGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLAT 835
IGDDRSDEDMFE+I A++ + A VFACTVGQKPS AKYYLDDT EV +LE LA
Sbjct: 776 IGDDRSDEDMFEAIGNAMSKRLLCDNALVFACTVGQKPSKAKYYLDDTTEVTCMLESLA- 834
Query: 836 ESVHSKSASYQESHEDL 852
E+ + + S +E E L
Sbjct: 835 EASEASNFSMRELDEAL 851
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q54K57|TPSA_DICDI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A OS=Dictyostelium discoideum GN=tpsA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 483 bits (1244), Expect = e-135, Method: Compositional matrix adjust.
Identities = 273/782 (34%), Positives = 434/782 (55%), Gaps = 70/782 (8%)
Query: 52 RRIIVANQLPVKAYYEKDSN-KWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDD 110
R I+V+N+LPV +K+SN KW + L L L++ I+VG + EI DD
Sbjct: 17 RLIVVSNRLPVSI--KKESNGKWSCKMSSGGLVAALSG---LKSNFIWVGWIGAEIEEDD 71
Query: 111 QEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQ 170
++E+ +L + + C+P FL V ++Y+GF LWPLFHY LP + R W
Sbjct: 72 RKEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHY-LPGDLDYDDRI----WN 126
Query: 171 AYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEI 230
+Y+ AN+ F+ V E++ P+ D VW+HDYH+M+LP L+++ ++GFFLH PFPSSEI
Sbjct: 127 SYVEANEQFSSVVAEILKPN-DLVWVHDYHMMLLPEILKQKKPDARIGFFLHIPFPSSEI 185
Query: 231 YRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVS 290
+R LP R EIL +LN LIGFHT+DYARHFL SC+R++GL G+ + R V
Sbjct: 186 FRVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPN----GVYFKDRFVQ 241
Query: 291 IKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQ 350
+ + PVGI +F + ++KELKE F+G V++G+D +D KGI K A+ +
Sbjct: 242 VGVFPVGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIKGIPQKLQAIER 301
Query: 351 LLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP 410
L +++P+ +GK+VL+Q+ P+R ++ Q L + + IN +G GY PI + +
Sbjct: 302 LFQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHYLFQS 361
Query: 411 LSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVI 470
+ + Y I++ ++ +RDGMNLV +Y V + + V+
Sbjct: 362 VDPSELTALYNISDAALITSIRDGMNLVAQEYIVCQT-----------------ENNGVL 404
Query: 471 IVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYW 530
I+SEF G + SLSGA+ +NPWN + VAD++ ++L M +E+ +H+ KY++ H ++W
Sbjct: 405 ILSEFTGAAQSLSGAVMINPWNTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHW 464
Query: 531 AKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILL 590
++L +A + ++V + +KL + + Y ++ RL++
Sbjct: 465 GLGFVKELNKASSN-------------TDKMVTI----QKLDIEKVVDIYKQSKRRLLIF 507
Query: 591 DYDGTVMPQTS--EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGL 648
YDGT++P + + RPS E+L+ + L NDPK V+I+SGR K +L WF G++ +GL
Sbjct: 508 AYDGTLIPYNNVPQLSRPSQELLNSFDILSNDPKTDVYILSGRDKKTLSEWFLGIQ-IGL 566
Query: 649 SAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQH 708
SAE+G F + +++ WE + D WKE P+ K +T T GSF E+KE WH+++
Sbjct: 567 SAEYGCFFKLPESTEWEQQVPSMDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHYRN 626
Query: 709 ADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGK 768
ADP FGS QA+EL HL+N+ P+ V G + V+ ++ +K +I+ +G
Sbjct: 627 ADPIFGSIQARELHLHLDNL----PLDVIVGDKTLGVRSYNINPLSSMKKVITDTIPKGL 682
Query: 769 SPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVIN 828
D +L IGD + + ++F +VG+K Y+L D AEV
Sbjct: 683 --DLILLIGDTHIHPSELPTFD-----------GKIFNISVGKKSVKDSYHLSDPAEVNY 729
Query: 829 LL 830
L+
Sbjct: 730 LI 731
|
Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9FZ57|TPS2_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Arabidopsis thaliana GN=TPS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 440 bits (1131), Expect = e-122, Method: Compositional matrix adjust.
Identities = 279/816 (34%), Positives = 434/816 (53%), Gaps = 61/816 (7%)
Query: 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQ 111
R ++VAN+LPV A N W E L L G + + +VG V++ + +
Sbjct: 13 RLLVVANRLPVSAK-RTGENSWSLEMSPGGLVSGLL-GITSQFDTKWVGWPGVDVHDEIE 70
Query: 112 EEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYM-LPLTASHGARFD-RGEW 169
+ T L + KC+P FL V +YY+G+C LWP+ H+M LP H ++
Sbjct: 71 KNALTESLAEMKCIPVFLNG-VFDQYYNGYCNGILWPILHHMGLPQEDQHDTNQTFETQY 129
Query: 170 QAYLSANKVFADKVMEVINPDE-DYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS 228
AY AN++F D +++ N +E D VW HDYHLM LP +L++ +++KVG+FLHSPFPSS
Sbjct: 130 DAYKKANRMFLDVIID--NYEEGDIVWCHDYHLMFLPQYLKEYNNKIKVGWFLHSPFPSS 187
Query: 229 EIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRT 288
E+Y+TLP R E+L+++L +DL+GFHT+D+ARHFLS+C+R+LG+ + + G+ Y GR
Sbjct: 188 EVYKTLPSRSELLRAILAADLLGFHTYDFARHFLSTCTRILGV----EGTHEGVVYQGRV 243
Query: 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAM 348
+ + P+GI +F L Q++ EL+EKF GK VILGVD +D+ KGI K+LA
Sbjct: 244 TRVAVFPIGIDPDRFIRTCKLPEVTQQMNELQEKFAGKKVILGVDRLDMIKGIPQKYLAF 303
Query: 349 GQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIK 408
+ LE++P R KVVLVQI P R+ + + L S + + IN FG PI +
Sbjct: 304 EKFLEENPYWRDKVVLVQIAVPTRNDVPEYRKLKSQVHGLVGRINGRFGSVSSLPIHHLD 363
Query: 409 EPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKS 468
+ YAIA+ +V +RDGMNLV Y++ ++ KK
Sbjct: 364 CSVDFNYLCAIYAIADVMLVTSLRDGMNLVSYEFVACQEA-----------------KKG 406
Query: 469 VIIVSEFIGCSPSLS-GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDV 527
V+++SEF G SL GA+ VNPW+V V+ A+ AL M +E+ RH +++Y+ +H
Sbjct: 407 VLVLSEFAGAGQSLGVGALIVNPWDVTEVSSAIKEALNMPAEERETRHRSNFQYVCTHSA 466
Query: 528 AYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRL 587
W +L + + R + L +L + Y+++N+RL
Sbjct: 467 EKWGLDFMSELNGIIPESEMQ----------MRKIPL-----QLPEQDVIQQYSQSNNRL 511
Query: 588 ILLDYDGTVM-PQTSEDK----RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642
I+L + GT+ P S K + + E+ L LCNDPK V ++S GK+ L F G
Sbjct: 512 IILGFFGTLAEPMNSGTKEMDLKLNPELKGTLKALCNDPKTTVVVLSRSGKNILNKNF-G 570
Query: 643 VEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAI 702
+ L+AE+G F + + + DW + + V K +T+ T S+ E ET++
Sbjct: 571 ESNIWLAAENGMFEKQTTGEWVTNMPQNVNLDWVDGVKNVFKYFTDRTPRSYFEASETSL 630
Query: 703 VWHHQHADPHFGSCQAKELLDHL-ENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLIS 761
VW++++AD FG QA++LL +L ++N V V RG H VEV G +KG + ++
Sbjct: 631 VWNYEYADVEFGRAQARDLLQYLWAGPISNASVDVVRGNHSVEVHAIGETKGAAIGRILG 690
Query: 762 TM--RSRGKSP-DFVLCIGDD-RSDEDMFESIEQAVADPSVPGIAEV-----FACTVGQK 812
+ R +P DFV C G DED++ E + P ++ F+ +GQ
Sbjct: 691 EIVHRKSMTTPIDFVFCSGYFLEKDEDIYTFFESKILSSKSPNGLDLKKENYFSAAIGQA 750
Query: 813 PSMAKYYLDDTAEVINLLEGLATESVHSKSASYQES 848
+ A+Y +D V++LL LA + + + S+ +S
Sbjct: 751 RTKARYVIDSAHGVVDLLHKLAVVADTTMTDSFSDS 786
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9SYM4|TPS1_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana GN=TPS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 270/774 (34%), Positives = 412/774 (53%), Gaps = 67/774 (8%)
Query: 51 QRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNV--EIGV 108
QR ++VAN+LPV A + + W E L L E I +NV E+G
Sbjct: 92 QRLLVVANRLPVSAV-RRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVG- 149
Query: 109 DDQEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYM-LPLTASHGA-RFDR 166
Q+ +S L EK +C+P FL ++ +YY+G+C + LWPLFHY+ LP R +
Sbjct: 150 --QKALSKALAEK-RCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ 206
Query: 167 GEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFP 226
++ AY AN++FAD V E + D VW HDYHLM LP L++ ++KVG+FLH+PFP
Sbjct: 207 SQFAAYKKANQMFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSKMKVGWFLHTPFP 265
Query: 227 SSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFG 286
SSEI+RTLP R E+L+S+L +DL+GFHT+DYARHF+S+C+R+LGL + G++ G
Sbjct: 266 SSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GVEDQG 321
Query: 287 RTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFL 346
R + P+GI +F + + Q +KELKE+F G+ V+LGVD +D+ KGI K L
Sbjct: 322 RLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKERFAGRKVMLGVDRLDMIKGIPQKIL 381
Query: 347 AMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVI 406
A + LE++ + R KVVL+QI P R+ + Q L S + I IN FG PI
Sbjct: 382 AFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHH 441
Query: 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQK 466
+ L YA+ + +V +RDGMNLV Y++ ++ K
Sbjct: 442 LDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQEA-----------------K 484
Query: 467 KSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSH 525
K V+I+SEF G + SL +GAI VNPWN+ VA ++ AL M +E+ RH ++ ++ +H
Sbjct: 485 KGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRHNFHHVKTH 544
Query: 526 DVAYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNS 585
WA++ +L + RI + PE L H Y+K+N+
Sbjct: 545 TAQEWAETFVSELNDTV------------IEAQLRISKVPPE---LPQHDAIQRYSKSNN 589
Query: 586 RLILLDYDGTVMPQTSEDKRPSTEVLSI-----------LNDLCNDPKNAVFIVSGRGKD 634
RL++L ++ T+ R ++ + L LC+DP + ++SG +
Sbjct: 590 RLLILGFNATLTEPVDNQGRRGDQIKEMDLNLHPELKGPLKALCSDPSTTIVVLSGSSRS 649
Query: 635 SLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSF 694
L F G + L+AE+G F R + + +W + + V K +TE T S
Sbjct: 650 VLDKNF-GEYDMWLAAENGMFLRLTNGEWMTTMPEHLNMEWVDSVKHVFKYFTERTPRSH 708
Query: 695 IEDKETAIVWHHQHADPHFGSCQAKELLDHL-ENVLANEPVVVKRGQHIVEVKPQGVSKG 753
E ++T+++W++++AD FG QA++LL HL ++N V V +G VEV+ GV+KG
Sbjct: 709 FETRDTSLIWNYKYADIEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKG 768
Query: 754 IVVKNLISTM---RSRGKSPDFVLCIGDDRS-DEDMFESIEQAVADPS-VPGIA 802
+ ++ + +S D+VLCIG DED++ E + PS +P IA
Sbjct: 769 AAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDVYTFFEPEL--PSDMPAIA 820
|
Required for normal embryo development, vegetative growth and transition to flowering. Regulates embryo growth, cell wall deposition, starch and sucrose degradation, but not cell differentiation. Involved in the regulation of glucose sensing and signaling genes during plant development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 854 | ||||||
| 444300782 | 862 | trehalose-6-phosphate synthase [Camellia | 0.974 | 0.965 | 0.702 | 0.0 | |
| 356562495 | 855 | PREDICTED: probable alpha,alpha-trehalos | 0.985 | 0.984 | 0.709 | 0.0 | |
| 255584928 | 803 | trehalose-6-phosphate synthase, putative | 0.920 | 0.978 | 0.717 | 0.0 | |
| 297832542 | 871 | predicted protein [Arabidopsis lyrata su | 0.980 | 0.960 | 0.686 | 0.0 | |
| 60265771 | 868 | trehalose-6-phosphate synthase [Ginkgo b | 0.992 | 0.976 | 0.660 | 0.0 | |
| 224088392 | 854 | predicted protein [Populus trichocarpa] | 0.991 | 0.991 | 0.670 | 0.0 | |
| 15224213 | 862 | putative alpha,alpha-trehalose-phosphate | 0.968 | 0.959 | 0.688 | 0.0 | |
| 147861933 | 857 | hypothetical protein VITISV_024248 [Viti | 0.974 | 0.970 | 0.664 | 0.0 | |
| 225424707 | 860 | PREDICTED: probable alpha,alpha-trehalos | 0.974 | 0.967 | 0.664 | 0.0 | |
| 225457083 | 862 | PREDICTED: probable alpha,alpha-trehalos | 0.980 | 0.970 | 0.663 | 0.0 |
| >gi|444300782|gb|AGD98700.1| trehalose-6-phosphate synthase [Camellia sinensis] | Back alignment and taxonomy information |
|---|
Score = 1266 bits (3277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/846 (70%), Positives = 707/846 (83%), Gaps = 14/846 (1%)
Query: 2 RSSLDLLNLISFDDFGTLNR--IPGVMKVPGVISEFENKSNDGTTTIVEPC--------Q 51
RS +LLNL +D+ ++R IP VM VPG+IS +N + T + +
Sbjct: 4 RSCFNLLNL---EDYSRVDRTRIPRVMTVPGIISCLDNNGGEETEPDNDDDDVVSSVNQE 60
Query: 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQ 111
RRIIV+NQLP+KA+ + ++ KW F++D+D+L LQLKDGFP + EVIY+G L VEI V DQ
Sbjct: 61 RRIIVSNQLPLKAHRDSETKKWCFDWDKDALALQLKDGFPQDIEVIYIGCLKVEIEVSDQ 120
Query: 112 EEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQA 171
+EVS L EKF+CVPTFLP+++ K+YHGFCKHYLW LFHYMLP+T +HG RFD+ W+A
Sbjct: 121 DEVSQFLFEKFRCVPTFLPSEIQNKFYHGFCKHYLWNLFHYMLPVTPNHGVRFDQSLWRA 180
Query: 172 YLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIY 231
Y+SANKVFAD +MEVINPDEDYVWIHDYHLMVLP+FLRKRFHR+K+GFFLHSPFPSSEIY
Sbjct: 181 YVSANKVFADTIMEVINPDEDYVWIHDYHLMVLPTFLRKRFHRIKLGFFLHSPFPSSEIY 240
Query: 232 RTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSI 291
RTLPVRDEIL++LLN DLIGFHTFDYARHFLS CSRMLGL+Y SKRGY+GL+Y+GRTVSI
Sbjct: 241 RTLPVRDEILRALLNCDLIGFHTFDYARHFLSCCSRMLGLDYHSKRGYVGLEYYGRTVSI 300
Query: 292 KILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQL 351
KILP GIHMGQ ESI S T +KV+ELKE+F+GKIV+LGVDDMD+FKGISLKFLAMG L
Sbjct: 301 KILPAGIHMGQLESIKSFPDTSKKVRELKERFEGKIVLLGVDDMDMFKGISLKFLAMGHL 360
Query: 352 LEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL 411
LE+HP++RGKVVLVQI NPARS GKD+Q++ ++ + + ++N +GKPGY+PIV I P+
Sbjct: 361 LEEHPEMRGKVVLVQIVNPARSRGKDIQEVQNEISSVLSQVNDKYGKPGYDPIVFINGPV 420
Query: 412 STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVII 471
STQDKV Y+AI+ECCVVN VRDGMNLVPYKYTV RQ +P LD+ALG++ P +KS+II
Sbjct: 421 STQDKVAYFAISECCVVNAVRDGMNLVPYKYTVCRQSNPDLDKALGLEGSETP-RKSMII 479
Query: 472 VSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWA 531
VSEFIGCSPSLSGAIRVNPWN+D+V++ M+ A+ M EK +RHEKHYKYISSHD+AYWA
Sbjct: 480 VSEFIGCSPSLSGAIRVNPWNIDSVSEGMNLAITMPEAEKQMRHEKHYKYISSHDIAYWA 539
Query: 532 KSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLD 591
+S DQDLERACR+H KRCWG+G GLGFR+VALGP F+KL + HI AYN TNSRLILLD
Sbjct: 540 RSFDQDLERACREHYRKRCWGIGFGLGFRVVALGPNFKKLAVEHIVPAYNGTNSRLILLD 599
Query: 592 YDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAE 651
YDGT+MPQ S DK PS +V+ +LN LC DP N VFIVSGRGKDSL WFS EKLGLSAE
Sbjct: 600 YDGTMMPQGSADKSPSDDVIKVLNGLCADPNNIVFIVSGRGKDSLSKWFSPCEKLGLSAE 659
Query: 652 HGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADP 711
HG+FTRW+K+S WE C L +FDWK IA PVM+ YTE TDGSFIE KE+A+VWHHQ ADP
Sbjct: 660 HGFFTRWNKDSPWESCMLAMNFDWKTIALPVMEHYTEATDGSFIEQKESALVWHHQEADP 719
Query: 712 HFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPD 771
FGS QAKELLDHLE+VLANEPVVVKRGQHIVEVKPQGVSKG+ V++LI+TM+ R K PD
Sbjct: 720 DFGSWQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGVAVESLIATMQMRRKPPD 779
Query: 772 FVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLE 831
FVLC+GDDRSDEDMFE+I ++V +PS+P IAEVFAC+VGQKPSMAKYYLDDT+EVI +L+
Sbjct: 780 FVLCVGDDRSDEDMFETIARSVTNPSMPAIAEVFACSVGQKPSMAKYYLDDTSEVIKMLQ 839
Query: 832 GLATES 837
GLA S
Sbjct: 840 GLAGMS 845
|
Source: Camellia sinensis Species: Camellia sinensis Genus: Camellia Family: Theaceae Order: Ericales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356562495|ref|XP_003549506.1| PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1254 bits (3246), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/855 (70%), Positives = 715/855 (83%), Gaps = 13/855 (1%)
Query: 2 RSSLDLLNLISFDDFGTL-NRIPGVMKVP-GVISEFE--NKSNDGTTTIVEPC--QRRII 55
RS L LLNL+S DD+ L +R P ++ G + E + N G+ V P +RRI+
Sbjct: 4 RSCLGLLNLVSVDDYHALASRAPRLVNTAAGDLPELDIDGMENSGSDDAVAPAPLERRIV 63
Query: 56 VANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVS 115
VANQLP++A+ ++ KW FE+D+DSL LQLKDGFP + EV+YVGSL EI QEEV+
Sbjct: 64 VANQLPIRAF--REGKKWRFEWDRDSLVLQLKDGFPSDVEVLYVGSLKAEIEPCKQEEVA 121
Query: 116 TILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSA 175
+LLEKF+CVPTF+P++VH K+YHGFCKHYLWPLFHYMLP++ S GARFDR +W+AY+ A
Sbjct: 122 QLLLEKFRCVPTFIPSEVHNKFYHGFCKHYLWPLFHYMLPMSPSQGARFDREQWKAYVLA 181
Query: 176 NKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLP 235
N++FADKV EVINPDEDYVWIHDYHLM+LP+FLRKRFHRVK+GFFLH+ FPSSEIYRTLP
Sbjct: 182 NRIFADKVTEVINPDEDYVWIHDYHLMILPTFLRKRFHRVKLGFFLHNTFPSSEIYRTLP 241
Query: 236 VRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILP 295
VR++IL++ LN DLIGFHTFDYARHFLS CSRMLGL+YESKRGYIGLDY+GRTV++KILP
Sbjct: 242 VREDILRAFLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTVKILP 301
Query: 296 VGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQH 355
GIHMG ES++SL T +VKELKE+++GKIVILGVDDMDLFKGISLKFLA+G+LLE
Sbjct: 302 AGIHMGLLESVLSLPQTALRVKELKEEYEGKIVILGVDDMDLFKGISLKFLALGKLLEVD 361
Query: 356 PDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQD 415
LRG+VVLVQI N ARS GKD+QD+ +++ IA EIN + +PGY+PIV I P+STQ+
Sbjct: 362 ESLRGRVVLVQILNAARSKGKDIQDVKNESEAIAREINEKYSQPGYQPIVYINGPISTQE 421
Query: 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGV---DEKNPPQKKSVIIV 472
K YYA++ECCVVN VRDGMNLVPY+YTV RQGS LD+ALGV D+K P K+SVIIV
Sbjct: 422 KAAYYAVSECCVVNAVRDGMNLVPYEYTVCRQGSVALDKALGVEGEDKKAP--KQSVIIV 479
Query: 473 SEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAK 532
SEFIGCSPSLSGAIRVNPWN+D VA+AM+SA+ M EK LRHEKHYKYISSHDVAYWA+
Sbjct: 480 SEFIGCSPSLSGAIRVNPWNIDDVAEAMNSAVTMSEAEKHLRHEKHYKYISSHDVAYWAR 539
Query: 533 SIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDY 592
S DQDL+RACR+H KR WGVGLGLGFRIVAL P FRKL + HIASAY T+SRLILLDY
Sbjct: 540 SFDQDLDRACREHYSKRYWGVGLGLGFRIVALDPTFRKLSVDHIASAYRDTHSRLILLDY 599
Query: 593 DGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEH 652
DGT+MPQ + +K PS EV+++LN LC+DP+N VFIVSGR KD LG WFS EKLGLSAEH
Sbjct: 600 DGTMMPQATINKTPSREVIAVLNYLCSDPENMVFIVSGRDKDCLGKWFSPCEKLGLSAEH 659
Query: 653 GYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPH 712
GYFTRWSK+S WE C L DF+WK IAEPVM LYTE TDGSFIE KE+A+VWHHQ ADP+
Sbjct: 660 GYFTRWSKDSPWETCGLATDFEWKMIAEPVMSLYTEATDGSFIEHKESAMVWHHQEADPY 719
Query: 713 FGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDF 772
FGSCQAKELLDHLE+VLANEPVVV RGQHIVEVKPQGVSKG VV++LIS MRS+GKSPDF
Sbjct: 720 FGSCQAKELLDHLESVLANEPVVVIRGQHIVEVKPQGVSKGKVVEDLISIMRSKGKSPDF 779
Query: 773 VLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEG 832
+LCIGDDRSDEDMFESI ++ ++P++P I +VFACTVGQKPSMA+YYLDDT+EV+ LLEG
Sbjct: 780 LLCIGDDRSDEDMFESIARSASNPALPTIPKVFACTVGQKPSMAEYYLDDTSEVMKLLEG 839
Query: 833 LATESVHSKSASYQE 847
LAT S S S + QE
Sbjct: 840 LATASAPSASIASQE 854
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|255584928|ref|XP_002533178.1| trehalose-6-phosphate synthase, putative [Ricinus communis] gi|223527012|gb|EEF29201.1| trehalose-6-phosphate synthase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1208 bits (3125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/787 (71%), Positives = 664/787 (84%), Gaps = 1/787 (0%)
Query: 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQ 111
RR++V+NQLP+ + K++NKW F D+DSL LQLKDGFP+ TEV YVG+L +I V DQ
Sbjct: 8 RRVVVSNQLPIISNLNKETNKWCFNLDKDSLVLQLKDGFPVNTEVCYVGTLKADIEVKDQ 67
Query: 112 EEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQA 171
+EVS +L +KFKCVP FL D+H +YHGFCKHYLWPL HYMLP++ SH ARFDR +W+A
Sbjct: 68 QEVSQLLFDKFKCVPVFLDLDMHNSFYHGFCKHYLWPLLHYMLPISPSHNARFDRSQWKA 127
Query: 172 YLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIY 231
Y+SAN FA KVMEV+NPDED+VWIHDYHLMVLP+ LRK++HR+KVGFFLH+ FPSSEIY
Sbjct: 128 YVSANIAFAGKVMEVLNPDEDFVWIHDYHLMVLPTLLRKKYHRIKVGFFLHNLFPSSEIY 187
Query: 232 RTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSI 291
RT+PVR+EIL+ LN DL+GF TFDYARHFLS CSRMLGLNYESKRG++GLDYFGR V+I
Sbjct: 188 RTIPVREEILRGFLNCDLVGFQTFDYARHFLSCCSRMLGLNYESKRGHLGLDYFGRIVNI 247
Query: 292 KILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQL 351
KILPVGIHMGQ E +++++ T + K+LK+K++GKIV++GVDD+D+FKGISLKFLA+ +L
Sbjct: 248 KILPVGIHMGQLEYLLNMEKTAKMAKQLKQKYEGKIVMVGVDDLDMFKGISLKFLAIWRL 307
Query: 352 LEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL 411
LEQH LRGK+VLVQITNPARS GKDVQ++ S+T I +IN +G Y PIV I P+
Sbjct: 308 LEQHESLRGKLVLVQITNPARSQGKDVQEVESETKLILRQINQLYGTAEYVPIVYINRPV 367
Query: 412 STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVII 471
STQ+K YYAI+ECCVVN +RDGMNLV YKYTV RQGSP LDR L +D+K+ P KKSV+I
Sbjct: 368 STQEKAAYYAISECCVVNAIRDGMNLVSYKYTVCRQGSPFLDRVLEIDKKSNP-KKSVLI 426
Query: 472 VSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWA 531
VSEFIGCSPSLSGAIRVNPWNVD VADAM A++M +EK LRH+KHYKYISSHDVAYWA
Sbjct: 427 VSEFIGCSPSLSGAIRVNPWNVDDVADAMFKAIKMSEEEKHLRHKKHYKYISSHDVAYWA 486
Query: 532 KSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLD 591
+S DQDLERACRDH KR WGVGLGL FRIVALGP FRKL M I AYNKT+SRLILLD
Sbjct: 487 RSFDQDLERACRDHYSKRYWGVGLGLNFRIVALGPNFRKLAMEPIVKAYNKTSSRLILLD 546
Query: 592 YDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAE 651
YDGT+ Q S DK P ++V+S+LN LC+DPKN +FIVSGRGKDSL NWFS E+LG++AE
Sbjct: 547 YDGTMKSQCSIDKAPRSDVISVLNCLCSDPKNVLFIVSGRGKDSLSNWFSPCERLGIAAE 606
Query: 652 HGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADP 711
HG+FTRW++++ WE C + D+ WK IAEPV+KLYTE TDGSFIE KE+A+VWH+ D
Sbjct: 607 HGFFTRWTRDTPWESCPIVMDYGWKRIAEPVLKLYTEATDGSFIEHKESALVWHYTETDS 666
Query: 712 HFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPD 771
HFG QAKELLDHLENVLANEPVVVKRGQ+IVEVKPQGVSKG+VV+ LISTMRS GK PD
Sbjct: 667 HFGISQAKELLDHLENVLANEPVVVKRGQYIVEVKPQGVSKGMVVEKLISTMRSEGKLPD 726
Query: 772 FVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLE 831
F+LCIGDDRSDEDMFESIE V DPS P IAEVFACTVGQKPSMAKYYLDDT+EVI+LL
Sbjct: 727 FLLCIGDDRSDEDMFESIESHVDDPSAPPIAEVFACTVGQKPSMAKYYLDDTSEVISLLL 786
Query: 832 GLATESV 838
G+AT SV
Sbjct: 787 GIATSSV 793
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297832542|ref|XP_002884153.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297329993|gb|EFH60412.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1198 bits (3099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 583/849 (68%), Positives = 690/849 (81%), Gaps = 12/849 (1%)
Query: 6 DLLNLISFDDFGTL--NRIP-GVMKVPGVISEFENKSND--GTTTIVEPCQRRIIVANQL 60
D L+L+S DD+ + NRIP V K+ G+ ++ + SND G + +P +RI+V+NQL
Sbjct: 8 DQLSLVSADDYRIMGRNRIPNAVTKLSGLETDDGDGSNDPNGGAWVTKP--KRIVVSNQL 65
Query: 61 PVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLE 120
P++A+ + SNKW FE+D DSLYLQLKDGFP ETEV+YVGSLN ++ +QE+VS LLE
Sbjct: 66 PLRAHRDISSNKWCFEFDNDSLYLQLKDGFPPETEVVYVGSLNADVLPSEQEDVSQFLLE 125
Query: 121 KFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFA 180
KF+CVPTFLP+D+ KYYHGFCKHYLWP+FHY+LP+T + G+ FDR W+AY + NK+FA
Sbjct: 126 KFQCVPTFLPSDLLSKYYHGFCKHYLWPIFHYLLPMTQAQGSLFDRSNWRAYTTVNKIFA 185
Query: 181 DKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEI 240
DK+ EV+NPD+DYVWIHDYHLM+LP+FLR RFHR+K+G FLHSPFPSSEIYRTLPVRDEI
Sbjct: 186 DKIFEVLNPDDDYVWIHDYHLMILPTFLRNRFHRIKLGIFLHSPFPSSEIYRTLPVRDEI 245
Query: 241 LKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHM 300
LK LN DL+GFHTFDYARHFLS CSRMLGL+YESKRGYIGL+YFGRTVSIKILPVGIHM
Sbjct: 246 LKGFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTVSIKILPVGIHM 305
Query: 301 GQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRG 360
GQ ESI + + T +KVK L+E+F G IV+LGVDD+D+FKGISLKF AMGQLLEQ+ +LRG
Sbjct: 306 GQIESIKASEETAEKVKGLRERFKGNIVMLGVDDLDMFKGISLKFWAMGQLLEQNEELRG 365
Query: 361 KVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKP-GYEPIVIIKEPLSTQDKVPY 419
KVVLVQITNPARSSGKDVQD+ N IA+EIN FG+P GY+PIV + P+ST DKV Y
Sbjct: 366 KVVLVQITNPARSSGKDVQDVEKQINLIADEINSKFGRPGGYKPIVFVNGPVSTLDKVAY 425
Query: 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS 479
YAI+EC VVN VRDGMNLVPYKYTV+RQGSP LD ALG E + +KSVIIVSEFIGCS
Sbjct: 426 YAISECVVVNAVRDGMNLVPYKYTVTRQGSPALDEALGFGEDD--VRKSVIIVSEFIGCS 483
Query: 480 PSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539
PSLSGAIRVNPWN+DAV DAM SA+ M ++EK LRH+KH+KYISSH+VAYWA+S DQDL+
Sbjct: 484 PSLSGAIRVNPWNIDAVTDAMSSAMTMSDKEKNLRHQKHHKYISSHNVAYWARSYDQDLQ 543
Query: 540 RACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQ 599
RAC+DH KR WGVG GL F++VAL P FR+L I AY +T+SRLILLDYDGT+M Q
Sbjct: 544 RACKDHFNKRFWGVGFGLFFKVVALDPNFRRLCAETIVPAYRRTSSRLILLDYDGTMMDQ 603
Query: 600 TSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWS 659
+ DKRPS +++S+LN LC+DP N VFIVSGRGKD L WF LG+SAEHGYFTRW+
Sbjct: 604 DTLDKRPSDDLISLLNRLCDDPNNLVFIVSGRGKDPLSKWFDSCPNLGISAEHGYFTRWN 663
Query: 660 KNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAK 719
NS WE L D WK+IA+PVM Y E TDGSFIE+KE+A+VWH+Q AD FGS QAK
Sbjct: 664 SNSPWETSELPADLSWKKIAKPVMNHYMEATDGSFIEEKESAMVWHYQEADHSFGSWQAK 723
Query: 720 ELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMR-SRGKSPDFVLCIGD 778
ELLDHLE+VL NEPVVVKRGQHIVEVKPQGVSKG VV+ LI+TMR ++GK PDF+LCIGD
Sbjct: 724 ELLDHLESVLTNEPVVVKRGQHIVEVKPQGVSKGKVVEYLIATMRNTKGKRPDFLLCIGD 783
Query: 779 DRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATESV 838
DRSDEDMF+SI + D S G+AEVFACTVGQKPS AKYYLDDT VI +LE LA+ S
Sbjct: 784 DRSDEDMFDSIVKH-QDVSSIGLAEVFACTVGQKPSKAKYYLDDTPSVIKMLEWLASASD 842
Query: 839 HSKSASYQE 847
SK Q+
Sbjct: 843 GSKHEQQQK 851
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|60265771|gb|AAX16014.1| trehalose-6-phosphate synthase [Ginkgo biloba] gi|60265773|gb|AAX16015.1| trehalose-6-phosphate synthase [Ginkgo biloba] | Back alignment and taxonomy information |
|---|
Score = 1197 bits (3097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/856 (66%), Positives = 681/856 (79%), Gaps = 8/856 (0%)
Query: 2 RSSLDLLNLIS--FDDFG-TLNRIPGVMKVPGVISEFENKSNDGTTTIVEP--CQRR-II 55
RS +L++L + F FG R+P VM VPG+ISE ++ +++ ++ V CQ R II
Sbjct: 4 RSYTNLMDLATGNFPAFGRATKRLPRVMTVPGIISELDDDNSNSVSSDVPSSICQERMII 63
Query: 56 VANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVS 115
VANQLP++A D+ W F +D+DSL LQLKDG + EV+YVGSL VE+ + +Q++V+
Sbjct: 64 VANQLPLRAQRRPDNRGWAFSWDEDSLLLQLKDGLAEDMEVVYVGSLKVEVDLSEQDDVA 123
Query: 116 TILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSA 175
ILLE FKCVP FLP ++ K+YHGFCK LWPLFHYMLPL+ HG RFDR WQAY+SA
Sbjct: 124 QILLENFKCVPAFLPPELLTKFYHGFCKQQLWPLFHYMLPLSPDHGGRFDRSLWQAYVSA 183
Query: 176 NKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLP 235
NK+FADKVMEVI+PD+DYVW+HDYHLMVLP+FLRKR +RVK+GFFLHSPFPSSEIYRTLP
Sbjct: 184 NKIFADKVMEVISPDDDYVWVHDYHLMVLPTFLRKRSNRVKLGFFLHSPFPSSEIYRTLP 243
Query: 236 VRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILP 295
VRDEIL++LLNSDLIGFHTFDYARHFLS CSRMLGL YESKRGYIGL+Y+GRTV IKILP
Sbjct: 244 VRDEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLEYESKRGYIGLEYYGRTVGIKILP 303
Query: 296 VGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQH 355
VGIHMGQ ES+++L T +V EL+++F GKI++LGVDDMD+FKGISLKFLAM QLL+ H
Sbjct: 304 VGIHMGQLESVLNLADTEWRVGELRDQFKGKILLLGVDDMDIFKGISLKFLAMEQLLKLH 363
Query: 356 PDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQD 415
P+ RGKVVLVQI NPAR GKDV+D+ ++T+ A+ IN FG+PGYEP+V+I P+ +
Sbjct: 364 PEWRGKVVLVQIANPARGRGKDVEDVQAETHSTAKRINETFGRPGYEPVVLIDRPVPFYE 423
Query: 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF 475
++ +Y IAEC V+ VRDGMNL PY+Y V RQGSP L+ LGV KKS+++VSEF
Sbjct: 424 RIAFYTIAECYVITAVRDGMNLTPYEYIVCRQGSPRLNETLGVSPNV--SKKSMLVVSEF 481
Query: 476 IGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSID 535
IGCSPSLSGAIRVNPWN+DAVA+AM +A+ M EK LRHEKHY+Y+S+HDV YWA S
Sbjct: 482 IGCSPSLSGAIRVNPWNIDAVAEAMSTAITMPETEKQLRHEKHYRYVSTHDVGYWAHSFM 541
Query: 536 QDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGT 595
QDLERAC+DH +RCWG+G GLGFR+VAL P FRKL HI SAY +T SR ILLDYDGT
Sbjct: 542 QDLERACKDHFRRRCWGIGFGLGFRVVALDPNFRKLSTEHIVSAYKRTKSRAILLDYDGT 601
Query: 596 VMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYF 655
+MPQTS +K P +EVL ILN LC+DPKN VFIVSGRG+ +L W S E LG++AEHGYF
Sbjct: 602 MMPQTSINKTPGSEVLFILNSLCSDPKNVVFIVSGRGRQTLSQWLSPCEMLGIAAEHGYF 661
Query: 656 TRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGS 715
RW++++ WE C DF WK+I EPVMKLYTETTDGS IE KE+A+VWHHQ ADP FGS
Sbjct: 662 IRWTRDAEWETCVQGVDFGWKQITEPVMKLYTETTDGSVIETKESALVWHHQDADPDFGS 721
Query: 716 CQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLC 775
CQAKELLDHLE+VLANEPVVVK GQHIVEVKPQGVSKG+V + L+S M K PDFV+C
Sbjct: 722 CQAKELLDHLESVLANEPVVVKSGQHIVEVKPQGVSKGLVAERLLSIMVQNDKRPDFVMC 781
Query: 776 IGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLAT 835
IGDDRSDEDMFE I A+A PS+ IAEVFACTVGQKPS AKYYLDDT EV+ +L+GLA
Sbjct: 782 IGDDRSDEDMFEGITSAMAGPSLSPIAEVFACTVGQKPSKAKYYLDDTVEVLRMLQGLAA 841
Query: 836 ESVHSKSASYQESHED 851
S + S ++ ++
Sbjct: 842 ASDQTAKTSSDQAAKN 857
|
Source: Ginkgo biloba Species: Ginkgo biloba Genus: Ginkgo Family: Ginkgoaceae Order: Ginkgoales Class: Ginkgoopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224088392|ref|XP_002308438.1| predicted protein [Populus trichocarpa] gi|222854414|gb|EEE91961.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1195 bits (3092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 571/852 (67%), Positives = 684/852 (80%), Gaps = 5/852 (0%)
Query: 2 RSSLDLLNLISFDDFGTLNRIPGVMKVPGVISEFENKSND--GTTTIVEPCQRRIIVANQ 59
+S D L++IS +DF ++RIP +M V G +SE E +D G T+ V RRI+VANQ
Sbjct: 4 QSCKDNLDMISVNDFRVVDRIPRIMNVLGALSEIEVGEHDDEGVTSPVVSKPRRIMVANQ 63
Query: 60 LPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILL 119
LP++ + +++ W FE D++SL LQ KDGFP +EV YVG L V++ DQ+EV+ +L
Sbjct: 64 LPIRGHRNEETKGWSFELDKESLVLQFKDGFPANSEVWYVGLLKVDVETKDQDEVARLLF 123
Query: 120 EKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGA-RFDRGEWQAYLSANKV 178
F+CVP FL D KYYHGFCKHYLWPLFHYMLPL+ S G RFDR W+ Y+ AN++
Sbjct: 124 SMFRCVPVFLTDDQKNKYYHGFCKHYLWPLFHYMLPLSPSRGGVRFDRSLWEGYIVANRL 183
Query: 179 FADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRD 238
FA+KV E++ ED VW+HDYHLMVLP+FLRKRF+RVK+GFFLHSPFPSSEIY T+PVR+
Sbjct: 184 FANKVTEILRHHEDSVWVHDYHLMVLPAFLRKRFNRVKLGFFLHSPFPSSEIYTTIPVRE 243
Query: 239 EILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGI 298
EIL+SLLN DLIGFHTFDYARHFLS CS+MLG++Y+ KRGYIGLDY G+T+SIKIL +GI
Sbjct: 244 EILRSLLNCDLIGFHTFDYARHFLSCCSKMLGIDYQCKRGYIGLDYCGKTISIKILHMGI 303
Query: 299 HMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDL 358
HMGQ ES+++++ T K+LKEKF+GKIV++GVDD+DL KGIS KF AMG+LLE P+L
Sbjct: 304 HMGQLESVLNMEQTATLAKQLKEKFEGKIVMVGVDDLDLLKGISSKFSAMGRLLEMRPEL 363
Query: 359 RGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVP 418
GKVVLVQI NPARS GKDVQ++ +T IA++IN +G GY+PIV I P+ST +K
Sbjct: 364 IGKVVLVQIANPARSQGKDVQEVQKETTLIAQQINQKYGYEGYQPIVFINGPVSTLEKAA 423
Query: 419 YYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC 478
YYAI+ECCVVN +RDGMNLV YKYTV RQGSPVLD+ALG+DE P +KS +IVSEFIGC
Sbjct: 424 YYAISECCVVNALRDGMNLVSYKYTVCRQGSPVLDKALGIDESYP--RKSFLIVSEFIGC 481
Query: 479 SPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538
SPSLSGA RVNPW+V AVADAM + + M+++EK LRHEKHYKYISSHDVA+WA+S D DL
Sbjct: 482 SPSLSGARRVNPWDVGAVADAMYAGIHMKDEEKHLRHEKHYKYISSHDVAFWARSFDLDL 541
Query: 539 ERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMP 598
ERAC+DH KR + VG GL FR+ A+G FR L + +AYN TNSRLILLDYDGT+MP
Sbjct: 542 ERACKDHYLKRYYNVGFGLNFRVAAVGTNFRMLTTERVVAAYNNTNSRLILLDYDGTMMP 601
Query: 599 QTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRW 658
Q + DK P +EV+SILN LC+DPKN VFIVSGRG+D L WFS E LG+SAEHGYFTRW
Sbjct: 602 QCAVDKTPRSEVISILNCLCSDPKNVVFIVSGRGRDPLSKWFSPCETLGISAEHGYFTRW 661
Query: 659 SKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQA 718
+KNS WE CS+ D DWK+I +PVM+ YTETTDGSFIE KE+A+VWHHQ ADP FGSCQA
Sbjct: 662 TKNSPWETCSVAMDCDWKKIVQPVMERYTETTDGSFIEPKESALVWHHQDADPDFGSCQA 721
Query: 719 KELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGD 778
KELLDHLE+VLANEPVVV+RGQ IVEVKPQGVSKGIVV+NLISTMRS+GKSPDF+ CIGD
Sbjct: 722 KELLDHLESVLANEPVVVRRGQQIVEVKPQGVSKGIVVENLISTMRSQGKSPDFLFCIGD 781
Query: 779 DRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATESV 838
DRSDEDMFESI + V +PS+P IAEVFACTVG KPS AKYYLDDT EVI LL+GLAT SV
Sbjct: 782 DRSDEDMFESIARLVDNPSIPPIAEVFACTVGLKPSKAKYYLDDTPEVIKLLQGLATASV 841
Query: 839 HSKSASYQESHE 850
SK A E +
Sbjct: 842 GSKYAHTLEDED 853
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15224213|ref|NP_179460.1| putative alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 [Arabidopsis thaliana] gi|75216907|sp|Q9ZV48.1|TPS11_ARATH RecName: Full=Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11; AltName: Full=Trehalose-6-phosphate synthase 11; Short=AtTPS11 gi|4185136|gb|AAD08939.1| putative trehalose-6-phosphate synthase [Arabidopsis thaliana] gi|330251701|gb|AEC06795.1| putative alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1191 bits (3081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/841 (68%), Positives = 684/841 (81%), Gaps = 14/841 (1%)
Query: 6 DLLNLISFDDFGTL--NRIP-GVMKVPGVISEFENKSNDGTTTIVEPCQRRIIVANQLPV 62
D L+L+S DD+ + NRIP V K+ G+ E +G + +P +RI+V+NQLP+
Sbjct: 8 DQLSLVSADDYRIMGRNRIPNAVTKLSGL----ETDDPNGGAWVTKP--KRIVVSNQLPL 61
Query: 63 KAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKF 122
+A+ + SNKW FE+D DSLYLQLKDGFP ETEV+YVGSLN ++ +QE+VS LLEKF
Sbjct: 62 RAHRDISSNKWCFEFDNDSLYLQLKDGFPPETEVVYVGSLNADVLPSEQEDVSQFLLEKF 121
Query: 123 KCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADK 182
+CVPTFLP+D+ KYYHGFCKHYLWP+FHY+LP+T + G+ FDR W+AY + NK+FADK
Sbjct: 122 QCVPTFLPSDLLNKYYHGFCKHYLWPIFHYLLPMTQAQGSLFDRSNWRAYTTVNKIFADK 181
Query: 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILK 242
+ EV+NPD+DYVWIHDYHLM+LP+FLR RFHR+K+G FLHSPFPSSEIYRTLPVRDEILK
Sbjct: 182 IFEVLNPDDDYVWIHDYHLMILPTFLRNRFHRIKLGIFLHSPFPSSEIYRTLPVRDEILK 241
Query: 243 SLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQ 302
LN DL+GFHTFDYARHFLS CSRMLGL+YESKRGYIGL+YFGRTVSIKILPVGIHMGQ
Sbjct: 242 GFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTVSIKILPVGIHMGQ 301
Query: 303 FESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKV 362
ESI + + T +KVK L+E+F G IV+LGVDD+D+FKGISLKF AMGQLLEQ+ +LRGKV
Sbjct: 302 IESIKASEKTAEKVKRLRERFKGNIVMLGVDDLDMFKGISLKFWAMGQLLEQNEELRGKV 361
Query: 363 VLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKP-GYEPIVIIKEPLSTQDKVPYYA 421
VLVQITNPARSSGKDVQD+ N IA+EIN FG+P GY+PIV I P+ST DKV YYA
Sbjct: 362 VLVQITNPARSSGKDVQDVEKQINLIADEINSKFGRPGGYKPIVFINGPVSTLDKVAYYA 421
Query: 422 IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS 481
I+EC VVN VRDGMNLVPYKYTV+RQGSP LD ALG E + +KSVIIVSEFIGCSPS
Sbjct: 422 ISECVVVNAVRDGMNLVPYKYTVTRQGSPALDAALGFGEDD--VRKSVIIVSEFIGCSPS 479
Query: 482 LSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541
LSGAIRVNPWN+DAV +AM SA+ M ++EK LRH+KH+KYISSH+VAYWA+S DQDL+RA
Sbjct: 480 LSGAIRVNPWNIDAVTNAMSSAMTMSDKEKNLRHQKHHKYISSHNVAYWARSYDQDLQRA 539
Query: 542 CRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTS 601
C+DH KR WGVG GL F++VAL P FR+L I AY +++SRLILLDYDGT+M Q +
Sbjct: 540 CKDHYNKRFWGVGFGLFFKVVALDPNFRRLCGETIVPAYRRSSSRLILLDYDGTMMDQDT 599
Query: 602 EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKN 661
DKRPS +++S+LN LC+DP N VFIVSGRGKD L WF LG+SAEHGYFTRW+ N
Sbjct: 600 LDKRPSDDLISLLNRLCDDPSNLVFIVSGRGKDPLSKWFDSCPNLGISAEHGYFTRWNSN 659
Query: 662 SAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKEL 721
S WE L D WK+IA+PVM Y E TDGSFIE+KE+A+VWHHQ AD FGS QAKEL
Sbjct: 660 SPWETSELPADLSWKKIAKPVMNHYMEATDGSFIEEKESAMVWHHQEADHSFGSWQAKEL 719
Query: 722 LDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMR-SRGKSPDFVLCIGDDR 780
LDHLE+VL NEPVVVKRGQHIVEVKPQGVSKG VV++LI+TMR ++GK PDF+LCIGDDR
Sbjct: 720 LDHLESVLTNEPVVVKRGQHIVEVKPQGVSKGKVVEHLIATMRNTKGKRPDFLLCIGDDR 779
Query: 781 SDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATESVHS 840
SDEDMF+SI + D S G+ EVFACTVGQKPS AKYYLDDT VI +LE LA+ S S
Sbjct: 780 SDEDMFDSIVKH-QDVSSIGLEEVFACTVGQKPSKAKYYLDDTPSVIKMLEWLASASDGS 838
Query: 841 K 841
K
Sbjct: 839 K 839
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|147861933|emb|CAN78769.1| hypothetical protein VITISV_024248 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1187 bits (3072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/840 (66%), Positives = 677/840 (80%), Gaps = 8/840 (0%)
Query: 2 RSSLDLLNLIS---FDDFGTLNRIPGVMKVPGVISEFEN-KSNDGTTTIVEPCQRRIIVA 57
RS + L+L S D T +P VM VPG+IS+ + SNDG + + +R+IIVA
Sbjct: 4 RSCANFLDLASGNLLDIPHTPRPLPRVMTVPGIISDLDGYGSNDGDSDVCH--ERKIIVA 61
Query: 58 NQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTI 117
N LP+ A +K + KW F D+D+L L LKDGF ETEVIYVGSL VEI +QEEV+
Sbjct: 62 NMLPLHAQRDKVTAKWCFSLDEDALLLHLKDGFSPETEVIYVGSLKVEIDASEQEEVAQK 121
Query: 118 LLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANK 177
LLE F CVPTFLP D+HKK+YHGFCK LWPLFHYMLP+ HG RFDR WQAY+SANK
Sbjct: 122 LLEDFNCVPTFLPHDLHKKFYHGFCKQQLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANK 181
Query: 178 VFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR 237
+FADKV EVINPD+DYVW+ DYHLMVLP+FLRKRFHRVK+GFFLHSPFPSSEIYRTLPVR
Sbjct: 182 IFADKVREVINPDDDYVWVQDYHLMVLPTFLRKRFHRVKLGFFLHSPFPSSEIYRTLPVR 241
Query: 238 DEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVG 297
DEIL+ LLN DLIGF TFDYARHFLS CSRMLGL+YESKRG+IGLDY GRTV IKILPVG
Sbjct: 242 DEILRGLLNCDLIGFQTFDYARHFLSCCSRMLGLDYESKRGHIGLDYSGRTVYIKILPVG 301
Query: 298 IHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPD 357
+HMG+ ES+++L T K+KE++++F+GK +ILGVDDMD+FKGISLKFLA+ QLL+QHP+
Sbjct: 302 VHMGRLESVLNLHSTSTKIKEIQKQFEGKKLILGVDDMDIFKGISLKFLAVEQLLQQHPE 361
Query: 358 LRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417
L+GK+VLVQI NPARS+GKDVQ+ +T AE IN +G P YEP+++I P++ +K
Sbjct: 362 LQGKLVLVQIVNPARSTGKDVQEAKRETYLTAERINETYGSPNYEPVILIDRPVARYEKS 421
Query: 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG 477
YYA+AECC+VN VRDGMNLVPYKY V RQG+P +D+ G++ +PP S+++VSEFIG
Sbjct: 422 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPHMDKETGMNLVSPPT--SMLVVSEFIG 479
Query: 478 CSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQD 537
CSPSLSGAIRVNPW+ DAVA+A++ A+ M N EK LRHEKHY+Y+SSHDVAYWA+S D
Sbjct: 480 CSPSLSGAIRVNPWDTDAVAEALNLAITMPNSEKQLRHEKHYRYVSSHDVAYWARSFMHD 539
Query: 538 LERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVM 597
L+RAC+DH KRCWG+GLGLGFR+V+L P FRKL + HI S Y +T R I LDYDGTV+
Sbjct: 540 LDRACKDHYSKRCWGIGLGLGFRVVSLSPSFRKLSIDHIVSTYKRTTRRAIFLDYDGTVV 599
Query: 598 PQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTR 657
PQ+S K PS EV+S+L+ LC+DPKN VFIVSGRG+ SL W + E+LG++AEHGYF R
Sbjct: 600 PQSSIIKSPSPEVISVLSTLCSDPKNTVFIVSGRGRSSLSEWLAPCERLGIAAEHGYFMR 659
Query: 658 WSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQ 717
W++++ WE C+L D DWK++ EPVM+LYTETTDGS IE KE+A+VWHHQ ADP FGSCQ
Sbjct: 660 WNESTKWESCNLAADLDWKKVVEPVMRLYTETTDGSNIEIKESALVWHHQDADPDFGSCQ 719
Query: 718 AKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIG 777
AKEL+DHLENVLANEP VVKRGQHIVEVKPQGVSKG+V + ++STM + GK PDFV+CIG
Sbjct: 720 AKELMDHLENVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLSTMVNDGKPPDFVMCIG 779
Query: 778 DDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATES 837
DDRSDEDMFE I + ++ PS+ E+FACTVGQKPS AKYYLDDT +V+ LL+GLAT S
Sbjct: 780 DDRSDEDMFEGIFRTISSPSLSMSPEIFACTVGQKPSKAKYYLDDTTDVVRLLQGLATAS 839
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424707|ref|XP_002264873.1| PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1187 bits (3072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/840 (66%), Positives = 677/840 (80%), Gaps = 8/840 (0%)
Query: 2 RSSLDLLNLIS---FDDFGTLNRIPGVMKVPGVISEFEN-KSNDGTTTIVEPCQRRIIVA 57
RS + L+L S D T +P VM VPG+IS+ + SNDG + + +R+IIVA
Sbjct: 4 RSCANFLDLASGSLLDIPHTPRPLPRVMTVPGIISDLDGYGSNDGDSDVCH--ERKIIVA 61
Query: 58 NQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTI 117
N LP+ A +K + KW F D+D+L L LKDGF ETEVIYVGSL VEI +QEEV+
Sbjct: 62 NMLPLHAQRDKVTAKWCFSLDEDALLLHLKDGFSPETEVIYVGSLKVEIDASEQEEVAQK 121
Query: 118 LLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANK 177
LLE F CVPTFLP D+HKK+YHGFCK LWPLFHYMLP+ HG RFDR WQAY+SANK
Sbjct: 122 LLEDFNCVPTFLPHDLHKKFYHGFCKQQLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANK 181
Query: 178 VFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR 237
+FADKV EVINPD+DYVW+ DYHLMVLP+FLRKRFHRVK+GFFLHSPFPSSEIYRTLPVR
Sbjct: 182 IFADKVREVINPDDDYVWVQDYHLMVLPTFLRKRFHRVKLGFFLHSPFPSSEIYRTLPVR 241
Query: 238 DEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVG 297
DEIL+ LLN DLIGF TFDYARHFLS CSRMLGL+YESKRG+IGLDY GRTV IKILPVG
Sbjct: 242 DEILRGLLNCDLIGFQTFDYARHFLSCCSRMLGLDYESKRGHIGLDYSGRTVYIKILPVG 301
Query: 298 IHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPD 357
+HMG+ ES+++L T K+KE++++F+GK +ILGVDDMD+FKGISLKFLA+ QLL+QHP+
Sbjct: 302 VHMGRLESVLNLHSTSAKIKEIQKQFEGKKLILGVDDMDIFKGISLKFLAVEQLLQQHPE 361
Query: 358 LRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417
L+GK+VLVQI NPARS+GKDVQ+ +T AE IN +G P YEP+++I P++ +K
Sbjct: 362 LQGKLVLVQIVNPARSTGKDVQEAKRETYLTAERINETYGSPNYEPVILIDRPVARYEKS 421
Query: 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG 477
YYA+AECC+VN VRDGMNLVPYKY V RQG+P +D+ G++ +PP S+++VSEFIG
Sbjct: 422 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPHMDKETGMNLVSPPT--SMLVVSEFIG 479
Query: 478 CSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQD 537
CSPSLSGAIRVNPW+ DAVA+A++ A+ M N EK LRHEKHY+Y+SSHDVAYWA+S D
Sbjct: 480 CSPSLSGAIRVNPWDTDAVAEALNLAITMPNSEKQLRHEKHYRYVSSHDVAYWARSFMHD 539
Query: 538 LERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVM 597
L+RAC+DH KRCWG+GLGLGFR+V+L P FRKL + HI S Y +T R I LDYDGTV+
Sbjct: 540 LDRACKDHYSKRCWGIGLGLGFRVVSLSPSFRKLSIDHIVSTYKRTTRRAIFLDYDGTVV 599
Query: 598 PQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTR 657
PQ+S K PS EV+S+L+ LC+DPKN VFIVSGRG+ SL W + E+LG++AEHGYF R
Sbjct: 600 PQSSIIKSPSPEVISVLSTLCSDPKNTVFIVSGRGRSSLSEWLAPCERLGIAAEHGYFMR 659
Query: 658 WSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQ 717
W++++ WE C+L D DWK++ EPVM+LYTETTDGS IE KE+A+VWHHQ ADP FGSCQ
Sbjct: 660 WNESTKWESCNLAADLDWKKVVEPVMRLYTETTDGSNIEIKESALVWHHQDADPDFGSCQ 719
Query: 718 AKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIG 777
AKEL+DHLENVLANEP VVKRGQHIVEVKPQGVSKG+V + ++STM + GK PDFV+CIG
Sbjct: 720 AKELMDHLENVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLSTMVNDGKPPDFVMCIG 779
Query: 778 DDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATES 837
DDRSDEDMFE I + ++ PS+ E+FACTVGQKPS AKYYLDDT +V+ LL+GLAT S
Sbjct: 780 DDRSDEDMFEGIFRTISSPSLSMSPEIFACTVGQKPSKAKYYLDDTTDVVRLLQGLATAS 839
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|225457083|ref|XP_002283215.1| PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1184 bits (3064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/847 (66%), Positives = 674/847 (79%), Gaps = 10/847 (1%)
Query: 3 SSLDLLNLISFDDFGTLNRIPGVMKVPGVISEFE-NKSNDGTTTIVEP-C-QRRIIVANQ 59
+S DLLN T +P VM VPG+IS+ + N SND + I C +++IIVAN
Sbjct: 14 ASGDLLNFPQ-----TPRTLPRVMTVPGIISDGDGNGSNDEDSDIFSSKCREKKIIVANF 68
Query: 60 LPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILL 119
LP+ A + ++ +W F +D+D+L LQ+KDGF ET+V+YVGSL V++ +QEEV+ LL
Sbjct: 69 LPLLAQKDLNTGRWCFSFDEDALLLQMKDGFSSETDVVYVGSLKVDVDTSEQEEVAERLL 128
Query: 120 EKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVF 179
+F CVPTFLP D+ KK+YHGFCK YLWPLFHYMLP++ H RFDR WQAY+SANK+F
Sbjct: 129 AEFNCVPTFLPPDLQKKFYHGFCKQYLWPLFHYMLPMSPEHCNRFDRFLWQAYVSANKIF 188
Query: 180 ADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDE 239
ADKVMEVINP+EDYVWIHDYHLM+LP+FLRKRF+RVK+GFFLHSPFPSSEIYRTLPVRD+
Sbjct: 189 ADKVMEVINPEEDYVWIHDYHLMILPTFLRKRFYRVKLGFFLHSPFPSSEIYRTLPVRDD 248
Query: 240 ILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIH 299
ILK+LLN+DL+GFHTFDYARHFLS CSRMLGLNYESKRG+IGL+YFGRTV +KILPVGIH
Sbjct: 249 ILKALLNADLVGFHTFDYARHFLSCCSRMLGLNYESKRGHIGLEYFGRTVYVKILPVGIH 308
Query: 300 MGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLR 359
MGQ ES ++L T KVKE++E+F GK +ILGVDDMD+FKG+SLK LAM LL+ + +LR
Sbjct: 309 MGQLESALNLPSTSIKVKEIQEQFKGKKIILGVDDMDIFKGLSLKLLAMEHLLQHYEELR 368
Query: 360 GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPY 419
G++VLVQI NPARS+GKDVQ+ +T I E IN NFG PGYEP+V+I P+ +K Y
Sbjct: 369 GELVLVQIVNPARSTGKDVQEAKRETYAITERINANFGFPGYEPVVLIDHPVPFYEKTAY 428
Query: 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS 479
YA+AECC+VN VRDGMNL+PY Y V RQG+P +D ALG+ + + S ++VSEFIGCS
Sbjct: 429 YALAECCIVNAVRDGMNLMPYNYIVCRQGTPKIDEALGITSGS--SRTSTLVVSEFIGCS 486
Query: 480 PSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539
PSLSGAIRVNPW++DAVADA++ A+ M EK LRHEKHY+Y+SSHDVAYWA S QDLE
Sbjct: 487 PSLSGAIRVNPWDIDAVADALNIAITMPGLEKQLRHEKHYRYVSSHDVAYWACSFMQDLE 546
Query: 540 RACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQ 599
RAC+DH KRCW +G GL FRIVAL P FRKL + HI AY + N R I LDYDGTV+PQ
Sbjct: 547 RACKDHYSKRCWSIGFGLSFRIVALSPNFRKLSLDHIVKAYKRANRRAIFLDYDGTVVPQ 606
Query: 600 TSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWS 659
+S K PS EV+SILNDLCNDPKN VFIVSGRGK+SL +WF+ + LG++AEHGYF RWS
Sbjct: 607 SSIVKTPSPEVISILNDLCNDPKNTVFIVSGRGKNSLSDWFAQCQNLGIAAEHGYFIRWS 666
Query: 660 KNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAK 719
++S WE L DFDWK IA+PVM+LYTE TDGS+IE KE+A+VWHHQ ADP FGSCQA
Sbjct: 667 QSSNWESRPLLMDFDWKRIADPVMQLYTEATDGSYIETKESALVWHHQDADPDFGSCQAM 726
Query: 720 ELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDD 779
ELLDHLENVLANEPV VKRG HIVEVKPQGVSKG V + ++STM S GK PDFV+CIGDD
Sbjct: 727 ELLDHLENVLANEPVEVKRGHHIVEVKPQGVSKGQVTEKILSTMISDGKPPDFVMCIGDD 786
Query: 780 RSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATESVH 839
RSDEDMFESI + PS+P E+FACTVGQKPS A+YYLDD+A+V+ LL+GLA S
Sbjct: 787 RSDEDMFESISSTIYSPSLPAPPEIFACTVGQKPSKARYYLDDSADVLKLLQGLARASSM 846
Query: 840 SKSASYQ 846
S Q
Sbjct: 847 KPKCSTQ 853
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: N/A Phylum: Streptophyta Superkingdom: |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 854 | ||||||
| TAIR|locus:2054027 | 862 | TPS11 "trehalose phosphatase/s | 0.968 | 0.959 | 0.688 | 1.10000010554e-317 | |
| TAIR|locus:2200216 | 860 | ATTPS6 [Arabidopsis thaliana ( | 0.971 | 0.965 | 0.641 | 9e-299 | |
| TAIR|locus:2199847 | 867 | TPS9 "trehalose-phosphatase/sy | 0.992 | 0.978 | 0.616 | 1.1e-298 | |
| TAIR|locus:2195678 | 861 | TPS10 "trehalose phosphate syn | 0.971 | 0.963 | 0.625 | 4.1e-294 | |
| TAIR|locus:2016179 | 856 | TPS8 "trehalose-6-phosphatase | 0.981 | 0.978 | 0.626 | 1.3e-292 | |
| TAIR|locus:2129425 | 862 | TPS5 "trehalose phosphatase/sy | 0.971 | 0.962 | 0.619 | 5.6e-290 | |
| TAIR|locus:2202290 | 851 | TPS7 "trehalose-phosphatase/sy | 0.983 | 0.987 | 0.599 | 1.1e-282 | |
| DICTYBASE|DDB_G0287657 | 733 | tpsA "alpha,alpha-trehalose-ph | 0.441 | 0.514 | 0.394 | 9.1e-126 | |
| TAIR|locus:2202990 | 942 | TPS1 "trehalose-6-phosphate sy | 0.453 | 0.410 | 0.406 | 4e-118 | |
| ASPGD|ASPL0000037859 | 908 | orlA [Emericella nidulans (tax | 0.406 | 0.382 | 0.352 | 5.9e-100 |
| TAIR|locus:2054027 TPS11 "trehalose phosphatase/synthase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3046 (1077.3 bits), Expect = 1.1e-317, P = 1.1e-317
Identities = 579/841 (68%), Positives = 684/841 (81%)
Query: 6 DLLNLISFDDFGTL--NRIPG-VMKVPGVISEFENKSNDGTTTIVEPCQRRIIVANQLPV 62
D L+L+S DD+ + NRIP V K+ G+ E +G + +P +RI+V+NQLP+
Sbjct: 8 DQLSLVSADDYRIMGRNRIPNAVTKLSGL----ETDDPNGGAWVTKP--KRIVVSNQLPL 61
Query: 63 KAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKF 122
+A+ + SNKW FE+D DSLYLQLKDGFP ETEV+YVGSLN ++ +QE+VS LLEKF
Sbjct: 62 RAHRDISSNKWCFEFDNDSLYLQLKDGFPPETEVVYVGSLNADVLPSEQEDVSQFLLEKF 121
Query: 123 KCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADK 182
+CVPTFLP+D+ KYYHGFCKHYLWP+FHY+LP+T + G+ FDR W+AY + NK+FADK
Sbjct: 122 QCVPTFLPSDLLNKYYHGFCKHYLWPIFHYLLPMTQAQGSLFDRSNWRAYTTVNKIFADK 181
Query: 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILK 242
+ EV+NPD+DYVWIHDYHLM+LP+FLR RFHR+K+G FLHSPFPSSEIYRTLPVRDEILK
Sbjct: 182 IFEVLNPDDDYVWIHDYHLMILPTFLRNRFHRIKLGIFLHSPFPSSEIYRTLPVRDEILK 241
Query: 243 SLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQ 302
LN DL+GFHTFDYARHFLS CSRMLGL+YESKRGYIGL+YFGRTVSIKILPVGIHMGQ
Sbjct: 242 GFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTVSIKILPVGIHMGQ 301
Query: 303 FESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKV 362
ESI + + T +KVK L+E+F G IV+LGVDD+D+FKGISLKF AMGQLLEQ+ +LRGKV
Sbjct: 302 IESIKASEKTAEKVKRLRERFKGNIVMLGVDDLDMFKGISLKFWAMGQLLEQNEELRGKV 361
Query: 363 VLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG-YEPIVIIKEPLSTQDKVPYYA 421
VLVQITNPARSSGKDVQD+ N IA+EIN FG+PG Y+PIV I P+ST DKV YYA
Sbjct: 362 VLVQITNPARSSGKDVQDVEKQINLIADEINSKFGRPGGYKPIVFINGPVSTLDKVAYYA 421
Query: 422 IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS 481
I+EC VVN VRDGMNLVPYKYTV+RQGSP LD ALG E + +KSVIIVSEFIGCSPS
Sbjct: 422 ISECVVVNAVRDGMNLVPYKYTVTRQGSPALDAALGFGEDDV--RKSVIIVSEFIGCSPS 479
Query: 482 LSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541
LSGAIRVNPWN+DAV +AM SA+ M ++EK LRH+KH+KYISSH+VAYWA+S DQDL+RA
Sbjct: 480 LSGAIRVNPWNIDAVTNAMSSAMTMSDKEKNLRHQKHHKYISSHNVAYWARSYDQDLQRA 539
Query: 542 CRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTS 601
C+DH KR WGVG GL F++VAL P FR+L I AY +++SRLILLDYDGT+M Q +
Sbjct: 540 CKDHYNKRFWGVGFGLFFKVVALDPNFRRLCGETIVPAYRRSSSRLILLDYDGTMMDQDT 599
Query: 602 EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKN 661
DKRPS +++S+LN LC+DP N VFIVSGRGKD L WF LG+SAEHGYFTRW+ N
Sbjct: 600 LDKRPSDDLISLLNRLCDDPSNLVFIVSGRGKDPLSKWFDSCPNLGISAEHGYFTRWNSN 659
Query: 662 SAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKEL 721
S WE L D WK+IA+PVM Y E TDGSFIE+KE+A+VWHHQ AD FGS QAKEL
Sbjct: 660 SPWETSELPADLSWKKIAKPVMNHYMEATDGSFIEEKESAMVWHHQEADHSFGSWQAKEL 719
Query: 722 LDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRS-RGKSPDFVLCIGDDR 780
LDHLE+VL NEPVVVKRGQHIVEVKPQGVSKG VV++LI+TMR+ +GK PDF+LCIGDDR
Sbjct: 720 LDHLESVLTNEPVVVKRGQHIVEVKPQGVSKGKVVEHLIATMRNTKGKRPDFLLCIGDDR 779
Query: 781 SDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATESVHS 840
SDEDMF+SI + D S G+ EVFACTVGQKPS AKYYLDDT VI +LE LA+ S S
Sbjct: 780 SDEDMFDSIVKH-QDVSSIGLEEVFACTVGQKPSKAKYYLDDTPSVIKMLEWLASASDGS 838
Query: 841 K 841
K
Sbjct: 839 K 839
|
|
| TAIR|locus:2200216 ATTPS6 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2868 (1014.6 bits), Expect = 9.0e-299, P = 9.0e-299
Identities = 547/853 (64%), Positives = 663/853 (77%)
Query: 2 RSSLDLLNLISFDD--FGTLNR-IPGVMKVPGVISEFENKSNDGTTTIVEPCQRRIIVAN 58
RS +LL L S D FG +NR IP +M V G++S +N S D T + P R IIVAN
Sbjct: 4 RSYSNLLELASGDSPTFGRMNRQIPRIMAVAGIMSNIDNDSKD---TDLSPKDRIIIVAN 60
Query: 59 QLPVKAYYEKDSNK-------------WGFEYDQDSLYLQLKDGFPLET-EVIYVGSLNV 104
+LP++A D N W F +D++SL LQLKDG E EVIYVG L
Sbjct: 61 ELPIRAQRRVDGNGSGSSSSSTCCSKGWNFSWDENSLLLQLKDGLGDEAIEVIYVGCLKE 120
Query: 105 EIGVDDQEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARF 164
EI +++QEEV ILLE FKCVPTFLP D++ +YYHGFCK LWPLFHYMLPL+ G RF
Sbjct: 121 EIPLNEQEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYMLPLSPDLGGRF 180
Query: 165 DRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSP 224
DR WQAY+S NK+FAD++MEVINP++D+VWIHDYHLMVLP+FLRKRF+RVK+GFFLHSP
Sbjct: 181 DRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSP 240
Query: 225 FPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDY 284
FPSSEIY+TLP+R+E+L++LLNSDLIGFHTFDYARHFLS CSRMLGL YESKRGYIGL+Y
Sbjct: 241 FPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEY 300
Query: 285 FGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFD--GKIVILGVDDMDLFKGIS 342
+GRTVSIKILPVGIHMGQ +S++SL T +KV EL E++ G+ ++LGVDDMD+FKGI+
Sbjct: 301 YGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDDMDIFKGIT 360
Query: 343 LKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402
LK LAM QLL QHP+ +GKVVLVQI NPAR GKDV+++ ++T + IN FG+PGY+
Sbjct: 361 LKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINETFGRPGYD 420
Query: 403 PIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKN 462
PIV+I PL ++V YY +AECC+V VRDGMNL+PY+Y VSRQG+ LD+ L + E N
Sbjct: 421 PIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNEKLDKILKL-EAN 479
Query: 463 PPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI 522
KKS+++VSEFIGCSPSLSGAIRVNPWNVDAVADAMDSAL++ EK LRHEKHYKY+
Sbjct: 480 NRNKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALEVAEPEKQLRHEKHYKYV 539
Query: 523 SSHDVAYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNK 582
S+HDV YWA+S QDLER+C +H +RCWG+G GL FR+VAL FRKL M HI SAY +
Sbjct: 540 STHDVGYWARSFLQDLERSCGEHGRRRCWGIGFGLSFRVVALDQSFRKLSMEHIVSAYKR 599
Query: 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642
T +R ILLDYD T+MPQ S DKRPS++ + ILN LC D N VFIVS + +++L +WFS
Sbjct: 600 TKTRAILLDYDDTLMPQGSIDKRPSSKSIDILNTLCRDKGNLVFIVSAKSRETLSDWFSP 659
Query: 643 VEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAI 702
EKLG++AEHGYF R K WE C D WK+IAEPVM+LYTETTDGS IEDKETA+
Sbjct: 660 CEKLGIAAEHGYFLRLRKAVEWENCVAAVDCSWKQIAEPVMELYTETTDGSTIEDKETAL 719
Query: 703 VWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLIST 762
VW ++ ADP FGSCQAKELLDHLE+VLANEPV VKRGQ+ VEVKPQGVSKG++ + ++S
Sbjct: 720 VWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQGVSKGLIARRMLSM 779
Query: 763 MRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDD 822
M+ RG P+FVLCIGDDRSDEDMFE I + PS+ AE+FACTVGQKPS AKYYLDD
Sbjct: 780 MQERGTLPEFVLCIGDDRSDEDMFEVICSSTEGPSIAPRAEIFACTVGQKPSKAKYYLDD 839
Query: 823 TAEVINLLEGLAT 835
T E++ L+ GLA+
Sbjct: 840 TTEIVRLMHGLAS 852
|
|
| TAIR|locus:2199847 TPS9 "trehalose-phosphatase/synthase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2867 (1014.3 bits), Expect = 1.1e-298, P = 1.1e-298
Identities = 528/857 (61%), Positives = 665/857 (77%)
Query: 2 RSSLDLLNLISFD--DFGTLNR-IPGVMKVPGVISEFENKSNDGTTTIVEPC---QRRII 55
RS + L+L S+D DF R +P VM VPG+ISE + +DG++ + +R+II
Sbjct: 4 RSCANFLDLASWDLLDFPQTQRALPRVMTVPGIISELDGGYSDGSSDVNSSNSSRERKII 63
Query: 56 VANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVS 115
VAN LP++A + ++ +W F +D+DSL LQL+DGF +TE +Y+GSLN +IG+ +QEEVS
Sbjct: 64 VANMLPLQAKRDTETGQWCFSWDEDSLLLQLRDGFSSDTEFVYIGSLNADIGISEQEEVS 123
Query: 116 TILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSA 175
LL F CVPTFLP ++ +K+Y GFCKH+LWPLFHYMLP+ HG RFDR WQAY+SA
Sbjct: 124 HKLLLDFNCVPTFLPKEMQEKFYLGFCKHHLWPLFHYMLPMFPDHGDRFDRRLWQAYVSA 183
Query: 176 NKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLP 235
NK+F+D+VMEVINP+EDYVWIHDYHLMVLP+FLRKRF+R+K+GFFLHSPFPSSEIYRTLP
Sbjct: 184 NKIFSDRVMEVINPEEDYVWIHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLP 243
Query: 236 VRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILP 295
VRD++L+ LLN DLIGFHTFDYARHFLS CSRMLGL+YESKRG+IGLDYFGRTV IKILP
Sbjct: 244 VRDDLLRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFIKILP 303
Query: 296 VGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQH 355
VGIHMG+ ES+++L T K+KE++E+F GK +ILGVDDMD+FKGISLK +AM +L E +
Sbjct: 304 VGIHMGRLESVLNLPSTAAKMKEIQEQFKGKKLILGVDDMDIFKGISLKLIAMERLFETY 363
Query: 356 PDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQD 415
+RGK+VL+QI NPAR++GKDV++ +T A+ IN +G GY+P+++I + +
Sbjct: 364 WHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINERYGSAGYQPVILIDRLVPRYE 423
Query: 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF 475
K YYA+A+CC+VN VRDGMNLVPYKY + RQG+P +D+A+G+ + + S+++VSEF
Sbjct: 424 KTAYYAMADCCLVNAVRDGMNLVPYKYIICRQGTPGMDKAMGISHDSA--RTSMLVVSEF 481
Query: 476 IGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSID 535
IGCSPSLSGAIRVNPW+VDAVA+A++ AL M EK LRHEKHY Y+S+HDV YWAKS
Sbjct: 482 IGCSPSLSGAIRVNPWDVDAVAEAVNLALTMGETEKRLRHEKHYHYVSTHDVGYWAKSFM 541
Query: 536 QDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGT 595
QDLERACR+H KRCWG+G GL FR+++L P FRKL + HI S Y T R I LDYDGT
Sbjct: 542 QDLERACREHYNKRCWGIGFGLSFRVLSLSPSFRKLSIDHIVSTYRNTQRRAIFLDYDGT 601
Query: 596 VMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYF 655
++P++S K P+ EVLS+L LC DPKN VF+VSGRG +SL +W S E LG++AEHGYF
Sbjct: 602 LVPESSIIKTPNAEVLSVLKSLCGDPKNTVFVVSGRGWESLSDWLSPCENLGIAAEHGYF 661
Query: 656 TRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGS 715
RWS WE C + + +WK + EPVM+ Y + TDGS IE KE+A+VWHHQ ADP FG+
Sbjct: 662 IRWSSKKEWETCYSSAEAEWKTMVEPVMRSYMDATDGSTIEYKESALVWHHQDADPDFGA 721
Query: 716 CQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLC 775
CQAKELLDHLE+VLANEPVVVKRGQHIVEVKPQGVSKG+ V+ +I M G PD V+C
Sbjct: 722 CQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAVEKVIHQMVEDGNPPDMVMC 781
Query: 776 IGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLAT 835
IGDDRSDEDMFESI V +P +P E+FACTVG+KPS AKY+LDD ++V+ LL GLA
Sbjct: 782 IGDDRSDEDMFESILSTVTNPDLPMPPEIFACTVGRKPSKAKYFLDDVSDVLKLLGGLAA 841
Query: 836 ESVHSKSASYQESHEDL 852
+ SK YQ+ L
Sbjct: 842 ATSSSKP-EYQQQSSSL 857
|
|
| TAIR|locus:2195678 TPS10 "trehalose phosphate synthase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2824 (999.2 bits), Expect = 4.1e-294, P = 4.1e-294
Identities = 524/838 (62%), Positives = 648/838 (77%)
Query: 6 DLLNLISFD--DFGTLNR-IPGVMKVPGVISEFENKS-NDGTTTIVE-PC-QRRIIVANQ 59
+LL+L S D D R +P VM VPG+IS+ + +DG + ++ PC +R+IIVAN
Sbjct: 8 NLLDLASGDLLDIPQTPRYLPRVMTVPGIISDVDGYGISDGDSDVISLPCRERKIIVANF 67
Query: 60 LPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILL 119
LP+ + ++ KW F D DS L LKDGF ETEVIYVGSL + V +Q+EVS L
Sbjct: 68 LPLNGKKDSETGKWKFSLDNDSPLLHLKDGFSPETEVIYVGSLKTHVDVSEQDEVSHNLF 127
Query: 120 EKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVF 179
E+F CV TFLP DVHKK+Y GFCK LWPLFHYMLP+ HG RFDRG WQAY+SANK+F
Sbjct: 128 EEFNCVATFLPQDVHKKFYLGFCKQQLWPLFHYMLPMCPDHGERFDRGLWQAYVSANKIF 187
Query: 180 ADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDE 239
ADKVM VIN +EDY+WIHDYHLMVLP+FLR+RFHRVK+GFFLHSPFPSSEIYRTLPVR+E
Sbjct: 188 ADKVMGVINLEEDYIWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVREE 247
Query: 240 ILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIH 299
+L+ LLN DLIGFHTFDYARHFLS C RMLGL YESKRG+I LDY GRTV +KILP+GIH
Sbjct: 248 LLRGLLNCDLIGFHTFDYARHFLSCCCRMLGLEYESKRGHIALDYLGRTVFLKILPIGIH 307
Query: 300 MGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLR 359
MG+ ES+++L T +K+KE++EK+ GK +ILGVDDMD+FKG+SLK LA LL+Q+P +
Sbjct: 308 MGRLESVLNLPATAEKLKEIQEKYRGKKIILGVDDMDIFKGLSLKILAFEHLLQQYPSML 367
Query: 360 GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPY 419
GK+VL+QI NPAR SGKDVQ+ +T + IN +G YEP+V+I P+ +K Y
Sbjct: 368 GKIVLIQIVNPARGSGKDVQEARKETYDTVKRINERYGSHDYEPVVLIDRPVPRFEKSAY 427
Query: 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS 479
YA+AECC+VN VRDGMNLVPYKYTV RQG+P ++++LGV + P + S +++SEFIGCS
Sbjct: 428 YALAECCIVNAVRDGMNLVPYKYTVCRQGTPSMNKSLGVSDDLP--RTSTLVLSEFIGCS 485
Query: 480 PSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539
PSLSGAIRVNPW+VDAVAD++ SA+ M + EK LRH+KH+ YIS+HDV YWA+S QDLE
Sbjct: 486 PSLSGAIRVNPWDVDAVADSLYSAITMSDFEKQLRHKKHFHYISTHDVGYWARSFSQDLE 545
Query: 540 RACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQ 599
RA RDH KRCWGVG GLGFR+VAL P FR+L + SAY +++ R I LDYDGT++P+
Sbjct: 546 RASRDHYSKRCWGVGWGLGFRLVALSPNFRRLSIEQTVSAYRRSSKRAIFLDYDGTLVPE 605
Query: 600 TSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWS 659
TS K PS EV+S L LC+DP N +FIVSGRGK SL W + E LG++AEHGYFTRW+
Sbjct: 606 TSIVKDPSAEVISALKALCSDPNNTIFIVSGRGKVSLSEWLAPCENLGIAAEHGYFTRWN 665
Query: 660 KNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAK 719
K+S WE L+ D +WK++ EP+M+LYTETTDGS IE KE+A+VWHHQ ADP FGSCQAK
Sbjct: 666 KSSDWETSGLSDDLEWKKVVEPIMRLYTETTDGSNIEAKESALVWHHQDADPDFGSCQAK 725
Query: 720 ELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDD 779
ELLDHLE VL NEPV+V RG IVEVKPQGVSKG+V ++S M G +PDFV+CIGDD
Sbjct: 726 ELLDHLETVLVNEPVIVNRGHQIVEVKPQGVSKGLVTGKILSRMLEDGIAPDFVVCIGDD 785
Query: 780 RSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATES 837
RSDE+MFE+I ++ S E+FACTVG+KPS AKY+LD+ ++V+ LL+GLA S
Sbjct: 786 RSDEEMFENISTTLSAQSSSMSTEIFACTVGRKPSKAKYFLDEVSDVVKLLQGLANTS 843
|
|
| TAIR|locus:2016179 TPS8 "trehalose-6-phosphatase synthase S8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2810 (994.2 bits), Expect = 1.3e-292, P = 1.3e-292
Identities = 531/847 (62%), Positives = 654/847 (77%)
Query: 2 RSSLDLLNLISFD--DFGTLNR-IPGVMKVPGVISEFE-NKSNDGTTTIVEPCQRRIIVA 57
RS + L+L S+D DF R +P VM VPG+I++ + + +++ T+T +R+IIVA
Sbjct: 4 RSCANFLDLSSWDLLDFPQTPRTLPRVMTVPGIITDVDGDTTSEVTSTSGGSRERKIIVA 63
Query: 58 NQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTI 117
N LP+++ + ++ KW F +D+DSL LQL+DGF ETE +YVGSLNV+I ++QEEVS
Sbjct: 64 NMLPLQSKRDAETGKWCFNWDEDSLQLQLRDGFSSETEFLYVGSLNVDIETNEQEEVSQK 123
Query: 118 LLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANK 177
LLE+F CV TFL ++ + +Y GFCKH LWPLFHYMLP+ HG RFDR WQAY+SANK
Sbjct: 124 LLEEFNCVATFLSQELQEMFYLGFCKHQLWPLFHYMLPMFPDHGDRFDRRLWQAYVSANK 183
Query: 178 VFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR 237
+F+D+VMEVINP++DYVWI DYHLMVLP+FLRKRF+R+K+GFFLHSPFPSSEIYRTLPVR
Sbjct: 184 IFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVR 243
Query: 238 DEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVG 297
DEIL+ LLN DLIGFHTFDYARHFLS CSRMLGL+YESKRG+IGLDYFGRTV IKILPVG
Sbjct: 244 DEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVG 303
Query: 298 IHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPD 357
+HMG+ ES++SLD T K KE++E+F GK ++LG+DDMD+FKGISLK +AM L E +
Sbjct: 304 VHMGRLESVLSLDSTAAKTKEIQEQFKGKKLVLGIDDMDIFKGISLKLIAMEHLFETYWH 363
Query: 358 LRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417
L+GKVVLVQI NPARSSGKDV++ +T A IN +G Y+PIV+I + +K
Sbjct: 364 LKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINERYGTSDYKPIVLIDRLVPRSEKT 423
Query: 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG 477
YYA A+CC+VN VRDGMNLVPYKY V RQG+ ++A+ VD +P + S ++VSEFIG
Sbjct: 424 AYYAAADCCLVNAVRDGMNLVPYKYIVCRQGTRS-NKAV-VDS-SP--RTSTLVVSEFIG 478
Query: 478 CSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQD 537
CSPSLSGAIRVNPW+VDAVA+A++SAL+M EK LRHEKHY YIS+HDV YWAKS QD
Sbjct: 479 CSPSLSGAIRVNPWDVDAVAEAVNSALKMSETEKQLRHEKHYHYISTHDVGYWAKSFMQD 538
Query: 538 LERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVM 597
LERACRDH KRCWG+G GLGFR+++L P FRKL + HI Y KT R I LDYDGT++
Sbjct: 539 LERACRDHYSKRCWGIGFGLGFRVLSLSPSFRKLSVEHIVPVYRKTQRRAIFLDYDGTLV 598
Query: 598 PQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTR 657
P++S + PS EV+S+L LC DP N VFIVSGRG++SL NW S E LG++AEHGYF R
Sbjct: 599 PESSIVQDPSNEVVSVLKALCEDPNNTVFIVSGRGRESLSNWLSPCENLGIAAEHGYFIR 658
Query: 658 WSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQ 717
W WE C D +W+ + EPVM+ Y E TDG+ IE KE+A+VWHHQ ADP FGSCQ
Sbjct: 659 WKSKDEWETCYSPTDTEWRSMVEPVMRSYMEATDGTSIEFKESALVWHHQDADPDFGSCQ 718
Query: 718 AKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIG 777
AKE+LDHLE+VLANEPVVVKRGQHIVEVKPQGVSKG+ + +I M RG+ P+ V+CIG
Sbjct: 719 AKEMLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAAEKVIREMVERGEPPEMVMCIG 778
Query: 778 DDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATES 837
DDRSDEDMFESI V +P + EVFACTVG+KPS AKY+LDD A+V+ LL GL S
Sbjct: 779 DDRSDEDMFESILSTVTNPELLVQPEVFACTVGRKPSKAKYFLDDEADVLKLLRGLGDSS 838
Query: 838 VHSKSAS 844
K +S
Sbjct: 839 SSLKPSS 845
|
|
| TAIR|locus:2129425 TPS5 "trehalose phosphatase/synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2785 (985.4 bits), Expect = 5.6e-290, P = 5.6e-290
Identities = 520/840 (61%), Positives = 651/840 (77%)
Query: 2 RSSLDLLNLIS--FDDFGT-LNRIPGVMKVPGVISEFENKSNDGTTTIVEPCQ----RRI 54
RS +LL+L S F F R P V V GV+SE ++ +N + P R I
Sbjct: 4 RSYSNLLDLASGNFHSFSREKKRFPRVATVTGVLSELDDDNNSNSVCSDAPSSVTQDRII 63
Query: 55 IVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEV 114
IV NQLP+K++ + K F +D DSL LQLKDG + EV+Y+G L +I +Q++V
Sbjct: 64 IVGNQLPIKSH-RNSAGKLSFSWDNDSLLLQLKDGMREDMEVVYIGCLKEQIDTVEQDDV 122
Query: 115 STILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLS 174
S LLE FKCVP ++P ++ KYYHGFCK +LWPLFHYMLPLT G RFDR WQAYLS
Sbjct: 123 SQRLLENFKCVPAYIPPELFTKYYHGFCKQHLWPLFHYMLPLTPDLGGRFDRSLWQAYLS 182
Query: 175 ANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTL 234
NK+FADKVMEVI+PD+D+VW+HDYHLMVLP+FLRKRF+RVK+GFFLHSPFPSSEIYRTL
Sbjct: 183 VNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTL 242
Query: 235 PVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKIL 294
PVR+E+L++LLN+DLIGFHTFDYARHFLS CSRMLGL+Y+SKRG IGL+Y+GRTVSIKIL
Sbjct: 243 PVRNELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYQSKRGTIGLEYYGRTVSIKIL 302
Query: 295 PVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQ 354
PVGIH+ Q +SI++L T KV EL+++F + V+LGVDDMD+FKGISLK LAM QLL Q
Sbjct: 303 PVGIHISQLQSILNLPETQTKVAELRDQFLDQKVLLGVDDMDIFKGISLKLLAMEQLLTQ 362
Query: 355 HPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQ 414
HP+ RG+VVLVQI NPAR GKDVQ++ S+T + IN FG+PGY+P+V+I PL
Sbjct: 363 HPEKRGRVVLVQIANPARGRGKDVQEVQSETEATVKRINEMFGRPGYQPVVLIDTPLQFF 422
Query: 415 DKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSE 474
+++ YY IAECC+V VRDGMNL+PY+Y + RQG+P L+ +G+D KKS+++VSE
Sbjct: 423 ERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNPKLNETIGLDPS--AAKKSMLVVSE 480
Query: 475 FIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSI 534
FIGCSPSLSGAIRVNPWN+DAV +AMD AL + EK +RHEKH+KY+S+HDVAYWA+S
Sbjct: 481 FIGCSPSLSGAIRVNPWNIDAVTEAMDYALIVSEAEKQMRHEKHHKYVSTHDVAYWARSF 540
Query: 535 DQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDG 594
QDLERAC DH+ KRCWG+G GLGFR+VAL P F+KL + HI SAY +T +R ILLDYDG
Sbjct: 541 IQDLERACGDHVRKRCWGIGFGLGFRVVALDPSFKKLSIEHIVSAYKRTKNRAILLDYDG 600
Query: 595 TVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGY 654
T++ S P+ E + ILN+L +DPKN V++VSG+ + +L WFS + LGL AEHGY
Sbjct: 601 TMVQPGSIRTTPTRETIEILNNLSSDPKNIVYLVSGKDRRTLTEWFSSCDDLGLGAEHGY 660
Query: 655 FTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFG 714
F R + + WE SL F+WK+IAEPVM+LYTETTDGS IE KETA+VW++Q ADP FG
Sbjct: 661 FIRPNDGTDWETSSLVSGFEWKQIAEPVMRLYTETTDGSTIETKETALVWNYQFADPDFG 720
Query: 715 SCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVL 774
SCQAKEL++HLE+VL N+PV VK GQ +VEVKPQGV+KG+V + L++TM+ +GK DF+L
Sbjct: 721 SCQAKELMEHLESVLTNDPVSVKTGQQLVEVKPQGVNKGLVAERLLTTMQEKGKLLDFIL 780
Query: 775 CIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLA 834
C+GDDRSDEDMFE I A P++ +AE+FACTVGQKPS AKYYLDDTAE+I +L+GLA
Sbjct: 781 CVGDDRSDEDMFEVIMSAKDGPALSPVAEIFACTVGQKPSKAKYYLDDTAEIIRMLDGLA 840
|
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| TAIR|locus:2202290 TPS7 "trehalose-phosphatase/synthase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2716 (961.1 bits), Expect = 1.1e-282, P = 1.1e-282
Identities = 515/859 (59%), Positives = 647/859 (75%)
Query: 2 RSSLDLLNLIS--FDDFGT-LNRIPGVMKVPGVISEFENK-----SNDGTTTIVEPCQRR 53
RS +LL+L S F G R+P VM VPG +SEF+ S+D +++ R
Sbjct: 4 RSYTNLLDLASGNFPVMGRERRRLPRVMTVPGNVSEFDEDQAYSVSSDNPSSVSS--DRM 61
Query: 54 IIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEE 113
IIVAN+LP+KA EK + W F +DQDSLYLQLKDG P + E++YVGSL+V++ ++Q++
Sbjct: 62 IIVANRLPLKA--EKRNGSWSFSWDQDSLYLQLKDGLPEDMEILYVGSLSVDVDSNEQDD 119
Query: 114 VSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYL 173
V+ ILL+KFKCVPTF P D+ K+Y GFCK +WPLFHYMLP +A HG RFDR W+AY+
Sbjct: 120 VAQILLDKFKCVPTFFPPDLQSKFYDGFCKRQIWPLFHYMLPFSADHGGRFDRSLWEAYV 179
Query: 174 SANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRT 233
+ NK+F KV+EVINPD+D+VWIHDYHLMVLP+FLR+RF+R+++GFFLHSPFPSSEIYR+
Sbjct: 180 ATNKLFFQKVIEVINPDDDFVWIHDYHLMVLPTFLRRRFNRIRMGFFLHSPFPSSEIYRS 239
Query: 234 LPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKI 293
LPVR+EILK+LLNSDLIGFHTFDYARHFL+ CSRMLGL Y+SKRGYIGL+Y+GRTV IKI
Sbjct: 240 LPVREEILKALLNSDLIGFHTFDYARHFLTCCSRMLGLEYQSKRGYIGLEYYGRTVGIKI 299
Query: 294 LPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLE 353
+PVGI+MG+ +S+M KV EL+ +F+GK V+LG+DDMD+FKGI+LK LAM Q+L
Sbjct: 300 MPVGINMGRIQSVMRYSEEEGKVMELRNRFEGKTVLLGIDDMDIFKGINLKLLAMEQMLR 359
Query: 354 QHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLST 413
QHP+ RG+ VLVQI NPAR G DV+++ + IN FGKPGY+PI+ I P+S
Sbjct: 360 QHPNWRGRAVLVQIVNPARGKGIDVEEIRGEIEESCRRINGEFGKPGYQPIIYIDTPVSI 419
Query: 414 QDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS 473
+ YY IAEC VV VRDGMNL PY+Y V RQG LG + KKS+++ S
Sbjct: 420 NEINAYYHIAECVVVTAVRDGMNLTPYEYIVCRQG------LLGSESDFSGPKKSMLVAS 473
Query: 474 EFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKS 533
EFIGCSPSLSGAIRVNPWNV+A +A++ AL M + EK LRHEKH++Y+S+HDVAYW++S
Sbjct: 474 EFIGCSPSLSGAIRVNPWNVEATGEALNEALSMSDAEKQLRHEKHFRYVSTHDVAYWSRS 533
Query: 534 IDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYD 593
QDLER C DH KRCWG+G+ GFR+VAL P FRKL + I S Y + SR ILLDYD
Sbjct: 534 FLQDLERICVDHFKKRCWGMGISFGFRVVALDPNFRKLSIPCIVSDYKRAKSRAILLDYD 593
Query: 594 GTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHG 653
GT+MPQ S +K PS EVL+ L+ LC D KN++FIVSGRG++SL WF+ +K+G++AEHG
Sbjct: 594 GTLMPQNSINKAPSQEVLNFLDALCEDKKNSIFIVSGRGRESLSKWFTPCKKIGIAAEHG 653
Query: 654 YFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHF 713
YF +WS + WE C + DF W +I EPVMK YTE+TDGS IE KE+A+VW ++ ADP F
Sbjct: 654 YFLKWSGSEEWETCGQSSDFGWMQIVEPVMKQYTESTDGSSIEIKESALVWQYRDADPGF 713
Query: 714 GSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFV 773
GS QAKE+L+HLE+VLANEPV VK G +IVEVKPQGVSKG V + + S+M +GK DFV
Sbjct: 714 GSLQAKEMLEHLESVLANEPVAVKSGHYIVEVKPQGVSKGSVSEKIFSSMAGKGKPVDFV 773
Query: 774 LCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGL 833
LCIGDDRSDEDMFE+I A++ + A VFACTVGQKPS AKYYLDDT EV +LE L
Sbjct: 774 LCIGDDRSDEDMFEAIGNAMSKRLLCDNALVFACTVGQKPSKAKYYLDDTTEVTCMLESL 833
Query: 834 ATESVHSKSASYQESHEDL 852
A E+ + + S +E E L
Sbjct: 834 A-EASEASNFSMRELDEAL 851
|
|
| DICTYBASE|DDB_G0287657 tpsA "alpha,alpha-trehalose-phosphate synthase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 763 (273.6 bits), Expect = 9.1e-126, Sum P(2) = 9.1e-126
Identities = 156/395 (39%), Positives = 238/395 (60%)
Query: 52 RRIIVANQLPVKAYYEKDSN-KWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDD 110
R I+V+N+LPV +K+SN KW + L L L++ I+VG + EI DD
Sbjct: 17 RLIVVSNRLPVSI--KKESNGKWSCKMSSGGLVAALSG---LKSNFIWVGWIGAEIEEDD 71
Query: 111 QEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQ 170
++E+ +L + + C+P FL V ++Y+GF LWPLFHY LP + R W
Sbjct: 72 RKEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHY-LPGDLDYDDRI----WN 126
Query: 171 AYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEI 230
+Y+ AN+ F+ V E++ P+ D VW+HDYH+M+LP L+++ ++GFFLH PFPSSEI
Sbjct: 127 SYVEANEQFSSVVAEILKPN-DLVWVHDYHMMLLPEILKQKKPDARIGFFLHIPFPSSEI 185
Query: 231 YRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVS 290
+R LP R EIL +LN LIGFHT+DYARHFL SC+R++GL G+ + R V
Sbjct: 186 FRVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPN----GVYFKDRFVQ 241
Query: 291 IKILPVGIHMGQF-ESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMG 349
+ + PVGI +F ES+ + V ++KELKE F+G V++G+D +D KGI K A+
Sbjct: 242 VGVFPVGIDPDKFFESLKTTQVQN-RIKELKESFEGTKVLIGIDRLDYIKGIPQKLQAIE 300
Query: 350 QLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKE 409
+L +++P+ +GK+VL+Q+ P+R ++ Q L + + IN +G GY PI + +
Sbjct: 301 RLFQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHYLFQ 360
Query: 410 PLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTV 444
+ + Y I++ ++ +RDGMNLV +Y V
Sbjct: 361 SVDPSELTALYNISDAALITSIRDGMNLVAQEYIV 395
|
|
| TAIR|locus:2202990 TPS1 "trehalose-6-phosphate synthase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 733 (263.1 bits), Expect = 4.0e-118, Sum P(3) = 4.0e-118
Identities = 163/401 (40%), Positives = 235/401 (58%)
Query: 51 QRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNV--EIGV 108
QR ++VAN+LPV A + + W E L L E I +NV E+G
Sbjct: 92 QRLLVVANRLPVSAV-RRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVG- 149
Query: 109 DDQEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYM-LPLTASHGA-RFDR 166
Q+ +S L EK +C+P FL ++ +YY+G+C + LWPLFHY+ LP R +
Sbjct: 150 --QKALSKALAEK-RCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ 206
Query: 167 GEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFP 226
++ AY AN++FAD V E + D VW HDYHLM LP L++ ++KVG+FLH+PFP
Sbjct: 207 SQFAAYKKANQMFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSKMKVGWFLHTPFP 265
Query: 227 SSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFG 286
SSEI+RTLP R E+L+S+L +DL+GFHT+DYARHF+S+C+R+LGL + G++ G
Sbjct: 266 SSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GVEDQG 321
Query: 287 RTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFL 346
R + P+GI +F + + Q +KELKE+F G+ V+LGVD +D+ KGI K L
Sbjct: 322 RLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKERFAGRKVMLGVDRLDMIKGIPQKIL 381
Query: 347 AMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVI 406
A + LE++ + R KVVL+QI P R+ + Q L S + I IN FG PI
Sbjct: 382 AFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHH 441
Query: 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447
+ L YA+ + +V +RDGMNLV Y++ ++
Sbjct: 442 LDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQE 482
|
|
| ASPGD|ASPL0000037859 orlA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 537 (194.1 bits), Expect = 5.9e-100, Sum P(2) = 5.9e-100
Identities = 134/380 (35%), Positives = 208/380 (54%)
Query: 465 QKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS 524
+ S +I+SEF G + +LS AI +NPW+ V++A++ AL +K +H K YK++++
Sbjct: 549 ENHSPLILSEFSGTAGALSSAIHINPWDTIGVSEAINKALTESVADKKEQHLKLYKHVTT 608
Query: 525 HDVAYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTN 584
+ V+ W+ +Q + R + L + +A P L + Y K+
Sbjct: 609 NTVSAWS---NQFISRLLAN----------LSSFDQSMAT-PA---LDRTKLLKQYRKSR 651
Query: 585 SRLILLDYDGTVMPQTSEDKR--PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642
RL + DYDGT+ P + + PS VL L L DP+NAV+I+SGR + L W
Sbjct: 652 KRLFMFDYDGTLTPIVKDPQSAIPSDRVLRTLKTLAADPRNAVWIISGRDQAFLDEWMGH 711
Query: 643 VEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDW-KEIAEPVMKLYTETTDGSFIEDKETA 701
+ +LGLSAEHG F R ++ W+ + T D W KE+ E + + +TE T GSFIE K+ A
Sbjct: 712 IPELGLSAEHGCFIRMPRSDNWQNLAETTDMGWQKEVME-IYQHFTERTQGSFIERKKVA 770
Query: 702 IVWHHQHADPHFGSCQAKELLDHLE-NVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLI 760
+ WH++ ADP +G+ QA+E LE +V V V G+ +EV+P+ V+KG + L+
Sbjct: 771 LTWHYRRADPEYGAFQARECRKQLEEHVSKTWDVEVMAGKANLEVRPRFVNKGFIATRLV 830
Query: 761 STMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVG--QKPSMAKY 818
GK P+F+LC GDD +DEDMF ++++ +PG V+ TVG K + A +
Sbjct: 831 QAYED-GKVPEFILCSGDDFTDEDMFRALKKF----ELPG-DHVYTVTVGASSKQTEASW 884
Query: 819 YL---DDTAEVINLLEGLAT 835
+L D E I +L A+
Sbjct: 885 HLLEPSDVIETITMLNNSAS 904
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q54K57 | TPSA_DICDI | 2, ., 4, ., 1, ., 1, 5 | 0.3491 | 0.8337 | 0.9713 | yes | no |
| Q9ZV48 | TPS11_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.6884 | 0.9683 | 0.9593 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| Al_scaffold_0003_3857 | annotation not avaliable (871 aa) | ||||||||||
(Arabidopsis lyrata) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 854 | |||
| PLN02205 | 854 | PLN02205, PLN02205, alpha,alpha-trehalose-phosphat | 0.0 | |
| pfam00982 | 470 | pfam00982, Glyco_transf_20, Glycosyltransferase fa | 0.0 | |
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 0.0 | |
| cd03788 | 460 | cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase ( | 0.0 | |
| PLN03063 | 797 | PLN03063, PLN03063, alpha,alpha-trehalose-phosphat | 1e-168 | |
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 1e-162 | |
| COG0380 | 486 | COG0380, OtsA, Trehalose-6-phosphate synthase [Car | 1e-141 | |
| TIGR02400 | 456 | TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-p | 1e-140 | |
| pfam02358 | 235 | pfam02358, Trehalose_PPase, Trehalose-phosphatase | 8e-90 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 2e-64 | |
| TIGR02398 | 487 | TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosph | 1e-60 | |
| COG1877 | 266 | COG1877, OtsB, Trehalose-6-phosphatase [Carbohydra | 1e-49 | |
| TIGR00685 | 244 | TIGR00685, T6PP, trehalose-phosphatase | 8e-28 | |
| TIGR01484 | 204 | TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, | 3e-19 | |
| PRK10187 | 266 | PRK10187, PRK10187, trehalose-6-phosphate phosphat | 1e-09 | |
| COG0561 | 264 | COG0561, Cof, Predicted hydrolases of the HAD supe | 4e-09 | |
| PLN02151 | 354 | PLN02151, PLN02151, trehalose-phosphatase | 1e-07 | |
| PLN03017 | 366 | PLN03017, PLN03017, trehalose-phosphatase | 3e-06 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 5e-05 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 5e-05 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 0.002 | |
| PLN02580 | 384 | PLN02580, PLN02580, trehalose-phosphatase | 0.003 | |
| PRK01158 | 230 | PRK01158, PRK01158, phosphoglycolate phosphatase; | 0.004 |
| >gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 1223 bits (3165), Expect = 0.0
Identities = 555/847 (65%), Positives = 675/847 (79%), Gaps = 13/847 (1%)
Query: 2 RSSLDLLNLISFDD--FGTLNR-IPGVMKVPGVISEFENKSNDGT----TTIVEPCQRRI 54
RS +LL L S + FG +NR IP +M V G++S+ ++ ++ ++ P R I
Sbjct: 4 RSYSNLLELASGESPSFGRMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKDRII 63
Query: 55 IVANQLPVKAYYEKDSNK-WGFEYDQDSLYLQLKDGF-PLETEVIYVGSLNVEIGVDDQE 112
IVANQLP++A + D +K W F +D++SL LQLKDG E EVIYVG L EI +++QE
Sbjct: 64 IVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQE 123
Query: 113 EVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAY 172
EVS ILLE FKCVPTFLP D+ +YYHGFCK LWPLFHYMLPL+ G RF+R WQAY
Sbjct: 124 EVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAY 183
Query: 173 LSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYR 232
+S NK+FAD++MEVINP++D+VWIHDYHLMVLP+FLRKRF+RVK+GFFLHSPFPSSEIY+
Sbjct: 184 VSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYK 243
Query: 233 TLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIK 292
TLP+R+E+L++LLNSDLIGFHTFDYARHFLS CSRMLGL+YESKRGYIGL+Y+GRTVSIK
Sbjct: 244 TLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIK 303
Query: 293 ILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVDDMDLFKGISLKFLAMGQ 350
ILPVGIHMGQ +S++SL T KVKEL ++F +I++LGVDDMD+FKGISLK LAM Q
Sbjct: 304 ILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQ 363
Query: 351 LLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP 410
LL QHP+ +GKVVLVQI NPAR GKDV+++ ++T+ + IN FGKPGY+PIV+I P
Sbjct: 364 LLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAP 423
Query: 411 LSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVI 470
L ++V YY +AECC+V VRDGMNL+PY+Y +SRQG+ LD+ LG++ P KKS++
Sbjct: 424 LKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTP--KKSML 481
Query: 471 IVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYW 530
+VSEFIGCSPSLSGAIRVNPWN+DAVADAMDSAL+M EK LRHEKHY+Y+S+HDV YW
Sbjct: 482 VVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYW 541
Query: 531 AKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILL 590
A+S QDLER CRDH +RCWG+G GL FR+VAL P FRKL M HI SAY +T +R ILL
Sbjct: 542 ARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILL 601
Query: 591 DYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSA 650
DYDGT+MPQ S DK PS++ + ILN LC D N VFIVS R + +L +WFS EKLG++A
Sbjct: 602 DYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAA 661
Query: 651 EHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHAD 710
EHGYF R ++ WE C D WK+IAEPVM+LYTETTDGS IEDKETA+VW ++ AD
Sbjct: 662 EHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDAD 721
Query: 711 PHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSP 770
P FGSCQAKELLDHLE+VLANEPV VK GQ+IVEVKPQGVSKG+V K L+S M+ RG P
Sbjct: 722 PDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGMLP 781
Query: 771 DFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLL 830
DFVLCIGDDRSDEDMFE I ++A PS+ AEVFACTVGQKPS AKYYLDDTAE++ L+
Sbjct: 782 DFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVRLM 841
Query: 831 EGLATES 837
+GLA+ S
Sbjct: 842 QGLASVS 848
|
Length = 854 |
| >gnl|CDD|216227 pfam00982, Glyco_transf_20, Glycosyltransferase family 20 | Back alignment and domain information |
|---|
Score = 642 bits (1659), Expect = 0.0
Identities = 230/494 (46%), Positives = 306/494 (61%), Gaps = 28/494 (5%)
Query: 51 QRRIIVANQLPVKAYYEKDSNKWGFEYDQDSL-YLQLKDGFPLETEVIYVGSLNVEIGVD 109
R ++V+N+LPV A E++ KW F S + +G TE ++VG V + D
Sbjct: 1 SRLVVVSNRLPVTAKREEEG-KWEFSIKMSSGGLVSALNGLSEATEGVWVGWPGVPVDED 59
Query: 110 -DQEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGE 168
++ VS +L EKF CVP FL + +YY+GF LWPLFHY LP ++ FDR
Sbjct: 60 EPKDRVSQLLKEKFTCVPVFLDDEDVDEYYNGFSNSILWPLFHYRLPP--NNEDEFDRSW 117
Query: 169 WQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS 228
W AY+ NK+FADK++EV D +W+HDYHLM+LP LRKR K+GFFLH PFPSS
Sbjct: 118 WDAYVKVNKLFADKIVEVYKDG-DLIWVHDYHLMLLPQMLRKRLPDAKIGFFLHIPFPSS 176
Query: 229 EIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRT 288
EI+R LPVR+EIL+ LL +DLIGFHT+DYARHFLS CSR+LGL S G++Y GRT
Sbjct: 177 EIFRCLPVREEILRGLLGADLIGFHTYDYARHFLSCCSRLLGLETTSDG---GVEYGGRT 233
Query: 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKI-VILGVDDMDLFKGISLKFLA 347
VS+ P+GI G+ ES + +KVKELKE+F K +ILGVD +D KGI K LA
Sbjct: 234 VSVGAFPIGIDPGRIESGLKSPSVQEKVKELKERFGNKKKLILGVDRLDYIKGIPQKLLA 293
Query: 348 MGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVII 407
+ LE++P+ RGKVVLVQI P+R ++ Q+L S + IN FG Y P+ +
Sbjct: 294 FERFLEEYPEWRGKVVLVQIAVPSRGDVEEYQNLRSQVEELVGRINGEFGTLDYTPVHHL 353
Query: 408 KEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKK 467
L + + YAIA+ C+V +RDGMNLV Y+Y +Q +K
Sbjct: 354 HRSLDFDELIALYAIADVCLVTSLRDGMNLVAYEYVACQQD-----------------RK 396
Query: 468 SVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHD 526
V+I+SEF G + SL GAI VNPW+++ VA+A++ AL M +E+ RH K +KYIS HD
Sbjct: 397 GVLILSEFAGAAQSLNDGAILVNPWDIEEVAEAINEALTMSEEERQKRHRKLFKYISKHD 456
Query: 527 VAYWAKSIDQDLER 540
V YWA+S DL+R
Sbjct: 457 VQYWAESFLSDLKR 470
|
Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. Length = 470 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 607 bits (1567), Expect = 0.0
Identities = 273/789 (34%), Positives = 406/789 (51%), Gaps = 72/789 (9%)
Query: 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDS--LYLQLKDGFPLETEVIYVG--SLNVEIG 107
R IIV+N+LPV E G E L L+ F ++VG L++E
Sbjct: 2 RLIIVSNRLPVTVVREDG----GVELTPSVGGLATGLR-SFHERGGGLWVGWPGLDLEEE 56
Query: 108 VDDQEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRG 167
++Q LE+ VP FL A+ +YY GFC LWPLFHY T F+
Sbjct: 57 SEEQRARIEPRLEELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTE-----FEDR 111
Query: 168 EWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPS 227
W++Y N+ FA+ + + P D VW+HDY LM+LP+ LR+R ++GFFLH PFPS
Sbjct: 112 FWESYERVNQRFAEAIAAIARPG-DVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPS 170
Query: 228 SEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGR 287
E++R LP R+EIL+ LL +DLIGFHT+DY RHFLSS R+LG E +G GR
Sbjct: 171 FEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLG----GR 226
Query: 288 TVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLA 347
V + P+GI +F + ++++ L++ G+ +IL +D +D KGI + LA
Sbjct: 227 IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLA 286
Query: 348 MGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVII 407
+ LE++P+ RGKV LVQ+ P+R+ Q++ + + + IN FG + PI
Sbjct: 287 FERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYF 346
Query: 408 KEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKK 467
L ++ V Y A+ +V +RDGMNLV +Y SR
Sbjct: 347 YRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRT-----------------DGD 389
Query: 468 SVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDV 527
V+I+SE G + L+ A+ VNP +++ +A A+ AL+M +E+ R + + + +DV
Sbjct: 390 GVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDV 449
Query: 528 AYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRL 587
WA +L A + F + P + I + Y + RL
Sbjct: 450 HKWASDFLDELREA-AEKNKA----------FASKPITPAAAEE----IIARYRAASRRL 494
Query: 588 ILLDYDGTVMP--QTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEK 645
+LLDYDGT++P E P E+ +L L DP V I+SGR +D+L WF +
Sbjct: 495 LLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL-P 553
Query: 646 LGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWH 705
+ L AEHG ++R + W++ +WK+ P+++ + + T GSFIE+KE ++ WH
Sbjct: 554 IHLVAEHGAWSR-APGGEWQL-LEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWH 611
Query: 706 HQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRS 765
+++ADP G +A EL+ L ++L+N P+ V RG +VEV+P GV+KG V+ L+
Sbjct: 612 YRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGP- 670
Query: 766 RGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAE 825
DFVL IGDD +DEDMF ++P A VG S A+Y L E
Sbjct: 671 ----YDFVLAIGDDTTDEDMFR---------ALPETA--ITVKVGPGESRARYRLPSQRE 715
Query: 826 VINLLEGLA 834
V LL L
Sbjct: 716 VRELLRRLL 724
|
Length = 726 |
| >gnl|CDD|99963 cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Score = 569 bits (1468), Expect = 0.0
Identities = 191/488 (39%), Positives = 277/488 (56%), Gaps = 28/488 (5%)
Query: 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQ 111
R ++V+N+LPV + D ++ G T ++VG +E +++
Sbjct: 1 RLVVVSNRLPVSIERDGD-GEFEAR-RSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEE 58
Query: 112 EEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQA 171
+EVST LL ++ P FL + + YY+GF LWPLFHY L L ARFDR +W+A
Sbjct: 59 DEVSTELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEA 113
Query: 172 YLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIY 231
Y+ N+ FAD + EV+ P D VW+HDYHL++LP LR+R ++GFFLH PFPSSEI+
Sbjct: 114 YVRVNRKFADAIAEVLRPG-DLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEIF 172
Query: 232 RTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSI 291
R LP R+E+L+ LL +DLIGF T YAR+FLS CSR+LGL G++Y GR V +
Sbjct: 173 RCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTD---DGGVEYGGRRVRV 229
Query: 292 KILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQL 351
P+GI F + + ++ EL+E+ G+ +I+GVD +D KGI + LA +L
Sbjct: 230 GAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERL 289
Query: 352 LEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL 411
LE++P+ RGKVVLVQI P+R+ + Q+L + + IN FG + P+ + L
Sbjct: 290 LERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSL 349
Query: 412 STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVII 471
++ Y A+ +V +RDGMNLV +Y + V+I
Sbjct: 350 PREELAALYRAADVALVTPLRDGMNLVAKEYVACQDD-----------------DPGVLI 392
Query: 472 VSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWA 531
+SEF G + LSGA+ VNP+++D VADA+ AL M +E+ RH K +Y+ +HDV WA
Sbjct: 393 LSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWA 452
Query: 532 KSIDQDLE 539
S DL
Sbjct: 453 NSFLDDLA 460
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. Length = 460 |
| >gnl|CDD|215555 PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 507 bits (1306), Expect = e-168
Identities = 281/823 (34%), Positives = 430/823 (52%), Gaps = 86/823 (10%)
Query: 51 QRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDD 110
R ++VAN+LPV A + W E L L ET+ ++G V++ +
Sbjct: 11 PRLLVVANRLPVSAK-RTGEDSWSLEMSPGGLVSALLGVKEFETK--WIGWPGVDVHDEI 67
Query: 111 QEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYM-LPLTASHGA-RFDRGE 168
+ T L + C+P FL +V +YY+G+C + LWP+FHYM LP H A R +
Sbjct: 68 GKAALTESLAEKGCIPVFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQ 126
Query: 169 WQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS 228
+ AY AN++F D V E + D VW HDYHLM LP +L++ +++KVG+FLH+PFPSS
Sbjct: 127 YDAYKKANRMFLDVVKENYE-EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSS 185
Query: 229 EIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRT 288
EIY+TLP R E+L+++L +DLIGFHT+D+ARHFLS+C+R+LG+ + G+ G+
Sbjct: 186 EIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GVVDQGKV 241
Query: 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAM 348
+ + P+GI +F + L Q +KELK F G+ VILGVD +D+ KGI K+LA
Sbjct: 242 TRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAF 301
Query: 349 GQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIK 408
+ LE++P+ R KV+LVQI P R+ + Q L S + + IN FG PI +
Sbjct: 302 EKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLD 361
Query: 409 EPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKS 468
+ YAI + +V +RDGMNLV Y++ ++ KK
Sbjct: 362 CSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKA-----------------KKG 404
Query: 469 VIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDV 527
V+++SEF G SL +GA+ VNPWN+ V+ A+ AL M ++E+ RH +++Y+ +H
Sbjct: 405 VLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSA 464
Query: 528 AYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRL 587
WA +L + R + E L + Y+K+N+RL
Sbjct: 465 QKWADDFMSELNDIIVEA------------ELRTRNIPLE---LPEQDVIQQYSKSNNRL 509
Query: 588 ILLDYDGTVM-PQTSEDKRPS----TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642
++L + GT+ P+ S+ K E+ L LC+DPK V ++S GKD L F G
Sbjct: 510 LILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNF-G 568
Query: 643 VEKLGLSAEHGYFTR-----WSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIED 697
+ L+AE+G F R W + + DW + + V K +T+ T S++E
Sbjct: 569 EYNIWLAAENGMFLRHTSGEWVTTMPEHM-----NLDWVDGVKNVFKYFTDRTPRSYVEK 623
Query: 698 KETAIVWHHQHADPHFGSCQAKELLDHL-ENVLANEPVVVKRGQHIVEVKPQGVSKGIVV 756
ET++VW++++AD FG QA+++L HL ++N V V RGQ VEV GV+KG +
Sbjct: 624 SETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAI 683
Query: 757 KNLISTMRSRGKSP----DFVLCIGDDRS-DEDMFESIEQAVADPSV------------- 798
++ + KS DFV C G DED++ E +
Sbjct: 684 GRILGEI-VHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKV 742
Query: 799 -PGIAEV-----FACTVGQKPSMAKYYLDDTAEVINLLEGLAT 835
+ ++ F+C +GQ + A+Y LD + +V++LL LA
Sbjct: 743 SSNLVDLKGENYFSCAIGQARTKARYVLDSSNDVVSLLHKLAV 785
|
Length = 797 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 495 bits (1276), Expect = e-162
Identities = 277/788 (35%), Positives = 422/788 (53%), Gaps = 87/788 (11%)
Query: 51 QRRIIVANQLPVKAYYEKDSNKWGFEYDQDSL---YLQLKDGFPLETEVIYVG--SLNVE 105
QR ++VAN+LPV A + + W E L L +K E E ++G +NV
Sbjct: 94 QRLLVVANRLPVSAV-RRGEDSWSLEISAGGLVSALLGVK-----EFEARWIGWAGVNVP 147
Query: 106 IGVDDQEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYM-------LPLTA 158
V Q+ ++ L EK +C+P FL ++ +YY+G+C + LWPLFHY+ L T
Sbjct: 148 DEVG-QKALTKALAEK-RCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTR 205
Query: 159 SHGARFDRGEWQAYLSANKVFADKVMEVINPDE-DYVWIHDYHLMVLPSFLRKRFHRVKV 217
S ++F AY AN++FAD V E + +E D VW HDYHLM LP L++ +KV
Sbjct: 206 SFQSQFA-----AYKKANQMFADVVNE--HYEEGDVVWCHDYHLMFLPKCLKEYNSNMKV 258
Query: 218 GFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKR 277
G+FLH+PFPSSEI+RTLP R E+L+S+L +DL+GFHT+DYARHF+S+C+R+LGL +
Sbjct: 259 GWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE- 317
Query: 278 GYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDL 337
G++ GR + P+GI +F + Q +KELKE+F G+ V+LGVD +D+
Sbjct: 318 ---GVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDM 374
Query: 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFG 397
KGI K LA + LE++P+ R KVVL+QI P R+ + Q L S + I IN FG
Sbjct: 375 IKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFG 434
Query: 398 KPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALG 457
PI + L YA+ + +V +RDGMNLV Y++ V+ Q S
Sbjct: 435 TLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEF-VACQDS-------- 485
Query: 458 VDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHE 516
KK V+I+SEF G + SL +GAI VNPWN+ VA ++ AL M +E+ RH
Sbjct: 486 --------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHR 537
Query: 517 KHYKYISSHDVAYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHI 576
++ ++++H WA++ +L + R + P+ L
Sbjct: 538 HNFMHVTTHTAQEWAETFVSELNDTVVEAQ------------LRTRQVPPQ---LPPEDA 582
Query: 577 ASAYNKTNSRLILLDYDGTV-MPQTSEDKRPST----------EVLSILNDLCNDPKNAV 625
Y ++N+RL++L ++ T+ P + +R E+ L LC+DPK +
Sbjct: 583 IQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTI 642
Query: 626 FIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKL 685
++SG + L F G + L+AE+G F R +K + DW + + V +
Sbjct: 643 VVLSGSDRSVLDENF-GEFDMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEY 701
Query: 686 YTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHL-ENVLANEPVVVKRGQHIVE 744
+TE T S E +ET++VW++++AD FG QA+++L HL ++N V V +G VE
Sbjct: 702 FTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVE 761
Query: 745 VKPQGVSKGIVVKNLISTM-RSRG-KSP-DFVLCIGDDRS-DEDMFESIEQAVADPSVPG 800
V+P GV+KG + ++ + S+ +P D+VLCIG DED++ E P +P
Sbjct: 762 VRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTFFE-----PELPS 816
Query: 801 IAEVFACT 808
+ A +
Sbjct: 817 DSPAIARS 824
|
Length = 934 |
| >gnl|CDD|223457 COG0380, OtsA, Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 425 bits (1096), Expect = e-141
Identities = 184/492 (37%), Positives = 266/492 (54%), Gaps = 27/492 (5%)
Query: 51 QRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDD 110
R I+V+N+LPVK E D + L LK ++G D+
Sbjct: 15 SRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALK-PLLRVDGGTWIGWSGTTGPTDE 73
Query: 111 QEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQ 170
+ + +F P L + ++ YY+GF LWPLFHY + A ++R W
Sbjct: 74 SSDDLKERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFHYFIDDVA-----YERNWWD 128
Query: 171 AYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEI 230
AY+ N+ FADK++E+ P D +W+HDYHL+++P LR+R K+GFFLH PFPSSE+
Sbjct: 129 AYVKVNRKFADKIVEIYEPG-DIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSEV 187
Query: 231 YRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVS 290
+R LP R+EIL+ LL +DLIGF T YAR+FL CSR+LG+ ++ + G D GR V
Sbjct: 188 FRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGAD--GRIVK 245
Query: 291 IKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDG-KIVILGVDDMDLFKGISLKFLAMG 349
+ P+GI +FE + +KV ELK + K +I+GVD +D KGI + LA
Sbjct: 246 VGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFE 305
Query: 350 QLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKE 409
+LLE++P+ RGKVVL+QI P+R ++ Q L + IN FG + P+ +
Sbjct: 306 RLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHR 365
Query: 410 PLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSV 469
L + + Y A+ +V +RDGMNLV +Y +++ K V
Sbjct: 366 DLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQR-----------------DKPGV 408
Query: 470 IIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAY 529
+I+SEF G + L A+ VNPW+ VADA+ AL M +E+ RHEK K + +HDVA
Sbjct: 409 LILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVAR 468
Query: 530 WAKSIDQDLERA 541
WA S DL +A
Sbjct: 469 WANSFLDDLAQA 480
|
Length = 486 |
| >gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 423 bits (1089), Expect = e-140
Identities = 180/490 (36%), Positives = 260/490 (53%), Gaps = 35/490 (7%)
Query: 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEI-GVDD 110
R I+V+N+LPV G E L + L G T ++ G + +
Sbjct: 1 RLIVVSNRLPVPITRG------GLEPSAGGLAVALL-GALKATGGVWFGWSGKTVEEDEG 53
Query: 111 QEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQ 170
+ + T L K P FL + YY+GF LWPLFHY L R+DR W+
Sbjct: 54 EPFLRTELEGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDRKAWE 108
Query: 171 AYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEI 230
AY N++FA+ + ++ P D VW+HDYHLM+LP+ LR+ + K+GFFLH PFPSSEI
Sbjct: 109 AYRRVNRLFAEALAPLLQPG-DIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSEI 167
Query: 231 YRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVS 290
YRTLP R E+L+ LL DL+GF T+D AR+FLS+ SR LGL G++ GRTV
Sbjct: 168 YRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRTVR 223
Query: 291 IKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQ 350
+ P+GI + +F +++ EL+E G+ +I+GVD +D KG+ + LA +
Sbjct: 224 VGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFER 283
Query: 351 LLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP 410
LE+HP+ RGKVVLVQI P+R + Q L + IN FG + PI +
Sbjct: 284 FLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRS 343
Query: 411 LSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVI 470
++ + Y A+ +V +RDGMNLV +Y V ++P K V+
Sbjct: 344 YDREELMALYRAADVGLVTPLRDGMNLVAKEY---------------VAAQDP--KDGVL 386
Query: 471 IVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYW 530
I+SEF G + L+GA+ VNP+++D +ADA+ AL M +E+ RH + +DV W
Sbjct: 387 ILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRW 446
Query: 531 AKSIDQDLER 540
+ DL
Sbjct: 447 REDFLSDLNS 456
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. Length = 456 |
| >gnl|CDD|216992 pfam02358, Trehalose_PPase, Trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 283 bits (726), Expect = 8e-90
Identities = 113/239 (47%), Positives = 150/239 (62%), Gaps = 7/239 (2%)
Query: 589 LLDYDGTVMPQ--TSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKL 646
LDYDGT+ P + PS +LS+LN L +DP N V I+SGR + + F GV L
Sbjct: 1 FLDYDGTLSPIVEDPDAAVPSDRLLSLLNRLASDPPNTVAIISGRSRAFE-DLFFGVPNL 59
Query: 647 GLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHH 706
GL+AEHG F R W + D DWK+ +++ YTE T GS+IEDK++A+ WH+
Sbjct: 60 GLAAEHGAFIRDPGGEDWTNLAEVEDLDWKKEVAAILEEYTERTPGSYIEDKKSALAWHY 119
Query: 707 QHADPHFGSCQAKELLDHLENVLANEP-VVVKRGQHIVEVKPQGVSKGIVVKNLISTMRS 765
++AD FG QAKEL +HLE+VL + P V V +G+ +VEV+P GVSKG + L+ + S
Sbjct: 120 RNADDDFGVFQAKELAEHLESVLKDYPDVRVTQGKKVVEVRPVGVSKGKAAERLLEELGS 179
Query: 766 RGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTA 824
G PDF LCIGDDR+DEDMF+ + S I EV A +VG KPS AKY+LDD +
Sbjct: 180 AGSPPDFPLCIGDDRTDEDMFDVVNP--TKMSGLSI-EVGATSVGSKPSSAKYFLDDPS 235
|
This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. Length = 235 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 223 bits (570), Expect = 2e-64
Identities = 137/444 (30%), Positives = 220/444 (49%), Gaps = 39/444 (8%)
Query: 103 NVEIGVDDQE----EVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTA 158
+ E G +DQ + I F L + +YY+ F LWP FHY L L
Sbjct: 43 SGETGNEDQPLKKVKKGNITWASFN-----LSEQDYDEYYNQFSNAVLWPAFHYRLDLV- 96
Query: 159 SHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVG 218
+F R W+ YL N + ADK++ ++ D D +WIHDYHL+ S LRKR ++G
Sbjct: 97 ----QFQRPAWEGYLRVNALLADKLLPLLKDD-DIIWIHDYHLLPFASELRKRGVNNRIG 151
Query: 219 FFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRG 278
FFLH PFP+ EI+ LP DE+L+ L + DL+GF T + FL S + + S +
Sbjct: 152 FFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKS 211
Query: 279 YIGLDYFGRTVSIKILPVGIHMGQFESI--MSLDVTGQKVKELKEKFDGKIVILGVDDMD 336
+ +G+ ++ P+GI + + I + K+ +LK + I V+ +D
Sbjct: 212 HTA---WGKAFRTEVYPIGI---EPDEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLD 265
Query: 337 LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNF 396
KG+ +FLA LLE++P GK+ QI +R + QD+ A IN +
Sbjct: 266 YSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKY 325
Query: 397 GKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRAL 456
G+ G+ P+ + + + + + ++ +V +RDGMNLV +Y ++
Sbjct: 326 GQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQ---------- 375
Query: 457 GVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHE 516
D NP V+++S+F G + L+ A+ VNP++ D VA A+D AL M E+I RH
Sbjct: 376 --DPANP----GVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHA 429
Query: 517 KHYKYISSHDVAYWAKSIDQDLER 540
+ I +D+ +W + DL++
Sbjct: 430 EMLDVIVKNDINHWQECFISDLKQ 453
|
Length = 474 |
| >gnl|CDD|131451 TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Score = 213 bits (543), Expect = 1e-60
Identities = 115/421 (27%), Positives = 197/421 (46%), Gaps = 42/421 (9%)
Query: 129 LPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVIN 188
L + +YH K WP+ H T +F +WQ +L N+ FA+
Sbjct: 77 LSKEQVDIFYHITSKEAFWPILH-----TFPERFQFREDDWQVFLKVNRAFAEAACL--E 129
Query: 189 PDED-YVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNS 247
E VW+HDY+L ++P ++R+ +K+ FF H+PFPS++++ LP R++I+ SLL
Sbjct: 130 AAEGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCC 189
Query: 248 DLIGFHTFDYARHFLSSCSRMLGLNYESK-----------------RGYIGLDYFGRTVS 290
D IGFH Y +F+ + ++ L S+ R LD R V
Sbjct: 190 DYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVK 249
Query: 291 IKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQ 350
+ PVG + S ++ + ++ ++ + G +IL + +D KGI K A +
Sbjct: 250 LGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYER 309
Query: 351 LLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP 410
LLE+ P+L GKV LV PA S +L + IN F + G+ P+
Sbjct: 310 LLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRS 369
Query: 411 LSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVI 470
L ++ ++A+A+ + +RDG+NLV +Y ++ G+ + V+
Sbjct: 370 LPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQ----------GLLD-------GVL 412
Query: 471 IVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYW 530
++SEF G + L GA+ NP++ + + + AL M E+ R + + ++ +DV W
Sbjct: 413 VLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRW 472
Query: 531 A 531
A
Sbjct: 473 A 473
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. Length = 487 |
| >gnl|CDD|224789 COG1877, OtsB, Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 175 bits (446), Expect = 1e-49
Identities = 84/267 (31%), Positives = 119/267 (44%), Gaps = 19/267 (7%)
Query: 571 LGMHHIASAYNKTNSRLILLDYDGTVMP--QTSEDKRPSTEVLSILNDLCNDPKNAVFIV 628
L + + Y RL+ LDYDGT+ E P +LS+L DL +DP+N V I+
Sbjct: 4 LQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAII 63
Query: 629 SGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTE 688
SGR L F GV +GL AEHG R W + D W + +++ Y E
Sbjct: 64 SGRSLAELERLF-GVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVE 122
Query: 689 TTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
T GS+IE K A+ H+++A+ G+ A L N L + V G+ +VE++P
Sbjct: 123 RTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELK---LRVTPGKMVVELRPP 179
Query: 749 GVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACT 808
GVSKG +K + M F + GDD +DED F AV +
Sbjct: 180 GVSKGAAIKYI---MDELPFDGRFPIFAGDDLTDEDAFA----AVNKLDSITV------K 226
Query: 809 VGQKPSMAKYYLDDTAEVINLLEGLAT 835
VG + AK+ L + L L
Sbjct: 227 VGVGSTQAKFRLAGVYGFLRSLYKLLE 253
|
Length = 266 |
| >gnl|CDD|233092 TIGR00685, T6PP, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 8e-28
Identities = 76/264 (28%), Positives = 118/264 (44%), Gaps = 37/264 (14%)
Query: 586 RLILLDYDGTVMP--QTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRG---KDSLGNWF 640
R DYDGT+ + S +L+IL L P NA++I+SGR K
Sbjct: 4 RAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGV--- 60
Query: 641 SGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFD--------WKEIAEPVMKLYTETTDG 692
+ LGL+ EHG + + + +D+ WK A + + T G
Sbjct: 61 -KLPGLGLAGEHGCEMKDNGS--------CQDWVNLTEKIPSWKVRANELREEITTR-PG 110
Query: 693 SFIEDKETAIVWHHQHA-DPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVS 751
FIE K A+ WH++ A P +AKEL E +L+ + V G+ +VE+KP+ V+
Sbjct: 111 VFIERKGVALAWHYRQAPVPELARFRAKELK---EKILSFTDLEVMDGKAVVELKPRFVN 167
Query: 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ 811
KG +VK L+ G SP + +GDD +DED F + + + G
Sbjct: 168 KGEIVKRLLWHQPGSGISP---VYLGDDITDEDAFRVVNNQWGNYGFYPVPIG----SGS 220
Query: 812 KPSMAKYYLDDTAEVINLLEGLAT 835
K ++AK++L +V+ L L
Sbjct: 221 KKTVAKFHLTGPQQVLEFLGLLVG 244
|
Trehalose, a neutral disaccharide of two glucose residues, is an important osmolyte for dessication and/or salt tolerance in a number of prokaryotic and eukaryotic species, including E. coli, Saccharomyces cerevisiae, and Arabidopsis thaliana. Many bacteria also utilize trehalose in the synthesis of trehalolipids, specialized cell wall constituents believed to be involved in the uptake of hydrophobic substances. Trehalose dimycolate (TDM, cord factor) and related substances are important constituents of the mycobacterial waxy coat and responsible for various clinically important immunological interactions with host organism. This enzyme, trehalose-phosphatase, removes a phosphate group in the final step of trehalose biosynthesis. The trehalose-phosphatase from Saccharomyces cerevisiae is fused to the synthase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes [Cellular processes, Adaptations to atypical conditions]. Length = 244 |
| >gnl|CDD|233434 TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Score = 86.7 bits (215), Expect = 3e-19
Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 15/213 (7%)
Query: 587 LILLDYDGT-VMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEK 645
L+ D DGT + P E S E + L L V +V+GR + +
Sbjct: 1 LLFFDLDGTLLDPNAHE---LSPETIEALERLREAG-VKVVLVTGRSLAEIKELLKQL-P 55
Query: 646 LGLSAEHGYFTRWSKNSAWEICSLTRDFD--WKEIAEPVMKLYTETTDGSFIEDKETAIV 703
L L AE+G + + S + KE +K +E G+FIEDK A+
Sbjct: 56 LPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVA 115
Query: 704 WHHQHADPHFGSCQAKELLDHLENVLANEPVVVKR--GQHIVEVKPQGVSKGIVVKNLIS 761
H+ G ++ + LE + N+ + G+ +EV P GV KG ++ L
Sbjct: 116 IHY--VGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQAL-- 171
Query: 762 TMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVA 794
++ D +L GD +DE+MFE AVA
Sbjct: 172 -LKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203
|
This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class II subfamilies are characterized by a domain that is located between the second and third conserved catalytic motifs of the superfamily domain. The IIB subfamily is distinguished from the IIA subfamily (TIGR01460) by homology and the predicted secondary structure of this domain by PSI-PRED. The IIB subfamily's Class II domain has the following predicted structure: Helix-Sheet-Sheet-(Helix or Sheet)-Helix-Sheet-(variable)-Helix-Sheet-Sheet. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing OMNI|TC0379 and OMNI|SA2196 whose relationship to the other groups is unclear [Unknown function, Enzymes of unknown specificity]. Length = 204 |
| >gnl|CDD|182291 PRK10187, PRK10187, trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 1e-09
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 17/162 (10%)
Query: 691 DGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGV 750
G+ +E K A H++ A H + A L + + ++ G+ +VE+KP+G
Sbjct: 118 PGAELEAKGMAFALHYRQAPQHEDALLA--LAQRI--TQIWPQLALQPGKCVVEIKPRGT 173
Query: 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVG 810
+KG + + G++P FV GDD +DE F + + GI + VG
Sbjct: 174 NKGEAIAAFMQEAPFAGRTPVFV---GDDLTDEAGFAVVNRL------GGI----SVKVG 220
Query: 811 QKPSMAKYYLDDTAEVINLLEGLATESVHSKSASYQESHEDL 852
+ A + L +V + LE + T + + ++ +E
Sbjct: 221 TGATQASWRLAGVPDVWSWLEMITTAQQQKRENNRRDDYESF 262
|
Length = 266 |
| >gnl|CDD|223635 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 4e-09
Identities = 44/243 (18%), Positives = 78/243 (32%), Gaps = 51/243 (20%)
Query: 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNA---VFIVSGRGKDSLGNWFSG 642
+L+ D DGT+ +K S E L L + V + +GR + +
Sbjct: 4 KLLAFDLDGTL---LDSNKTISPETKEALARL----REKGVKVVLATGRPLPDVLSIL-- 54
Query: 643 VEKLGLSA--------------EHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTE 688
E+LGL E + S+ E+ L DF ++ +
Sbjct: 55 -EELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG----IALVLYTDD 109
Query: 689 TTDGSFIEDKETAIVWHHQHADPHFGSC----------------QAKELLDHLENVLANE 732
+ + P +EL++ L +
Sbjct: 110 GIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDL 169
Query: 733 PVVVKRG-QHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791
+ V +++ P+GVSKG ++ L + G + V+ GD +D +M E
Sbjct: 170 GLTVSSSGPISLDITPKGVSKGYALQRLAKLL---GIKLEEVIAFGDSTNDIEMLEVAGL 226
Query: 792 AVA 794
VA
Sbjct: 227 GVA 229
|
Length = 264 |
| >gnl|CDD|177812 PLN02151, PLN02151, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 54.3 bits (130), Expect = 1e-07
Identities = 63/260 (24%), Positives = 122/260 (46%), Gaps = 28/260 (10%)
Query: 587 LILLDYDGTVMPQTSEDKRP--STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE 644
++ LDYDGT+ P + R S ++ + + L A IVSGR ++ + + F +
Sbjct: 100 VMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKCFPTA--IVSGRCREKVSS-FVKLT 156
Query: 645 KLGLSAEHGY-------FTRWSKNSAWEICSLTRDFDWKEIAEPVMKLY--TETTDGSFI 695
+L + HG +++ K + +C +F I E KL T++ G+ +
Sbjct: 157 ELYYAGSHGMDIKGPEQGSKYKKENQSLLCQPATEF-LPVINEVYKKLVEKTKSIPGAKV 215
Query: 696 EDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEP-VVVKRGQHIVEVKPQ-GVSKG 753
E+ + H + + + S +L + + +VL N P +++ +G+ ++E++P KG
Sbjct: 216 ENNKFCASVHFRCVEENKWS----DLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKG 271
Query: 754 IVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP 813
++ L+ ++ + F + IGDDR+DED F+ + + + +A K
Sbjct: 272 KALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGI--LVSKYA-----KE 324
Query: 814 SMAKYYLDDTAEVINLLEGL 833
+ A Y L + EV+ LE L
Sbjct: 325 TNASYSLQEPDEVMEFLERL 344
|
Length = 354 |
| >gnl|CDD|178591 PLN03017, PLN03017, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 3e-06
Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 33/263 (12%)
Query: 587 LILLDYDGTVMPQTSEDKRP--STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE 644
++ LDYDGT+ P + + S+++ + L A IV+GR D + N F +
Sbjct: 113 VMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAKCFPTA--IVTGRCIDKVYN-FVKLA 169
Query: 645 KLGLSAEHGY--------FTRWSKNSAWEICSLTRDFDWKEIAEPVMKLY--TETTDGSF 694
+L + HG F+R + + D+ I E +L T++T G+
Sbjct: 170 ELYYAGSHGMDIKGPAKGFSRHKRVKQSLLYQPANDY-LPMIDEVYRQLLEKTKSTPGAK 228
Query: 695 IEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVV-VKRGQHIVEVKPQ-GVSK 752
+E+ + H + D S EL+ + +VL N P + + +G+ + E++P K
Sbjct: 229 VENHKFCASVHFRCVDEKKWS----ELVLQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDK 284
Query: 753 GIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK 812
G ++ L+ ++ + F + IGDDR+DED F+ + E F V +
Sbjct: 285 GKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLR---------DRGEGFGILVSKF 335
Query: 813 P--SMAKYYLDDTAEVINLLEGL 833
P + A Y L D +EV++ L L
Sbjct: 336 PKDTDASYSLQDPSEVMDFLARL 358
|
Length = 366 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 46.1 bits (108), Expect = 5e-05
Identities = 58/358 (16%), Positives = 115/358 (32%), Gaps = 61/358 (17%)
Query: 190 DEDYVWIHD--YHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNS 247
D + H L + L + + + LH P + L +
Sbjct: 83 PYDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLL--------- 133
Query: 248 DLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIM 307
G R + + S L+ G I ++P GI +F
Sbjct: 134 ---GLLRLLLKRLKKALRLLADRVIAVSPALKELLEALGVPNKIVVIPNGIDTEKF---- 186
Query: 308 SLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQI 367
+ GK V+L V +D KG+ L A +L ++ PD++ +V
Sbjct: 187 ------APARIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIV---- 236
Query: 368 TNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCV 427
D + + ++A+++ L E V + ++ A A+ V
Sbjct: 237 --------GDGPERREELEKLAKKLGL-------EDNVKFLGYVPDEELAELLASADVFV 281
Query: 428 VNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIR 487
+ + +G LV + G+PV+ +G + E + + +
Sbjct: 282 LPSLSEGFGLVLLEA--MAAGTPVIASDVGG-------------IPEVVEDGET---GLL 323
Query: 488 VNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERACRDH 545
V P +V+ +ADA++ L+ + L + A+ + + E +
Sbjct: 324 VPPGDVEELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLELYEELLAEK 381
|
Length = 381 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 5e-05
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 717 QAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCI 776
EL L+ + + + G +E+ P+GVSKG +K L + G + V+
Sbjct: 152 DLDELEKELKELFGSLITITSSGPGYLEIMPKGVSKGTALKALAKHL---GIDLEEVIAF 208
Query: 777 GDDRSDEDMFESIEQAVA 794
GD +D +M E VA
Sbjct: 209 GDGENDIEMLELAGLGVA 226
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.002
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 735 VVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVA 794
VV G + +E+ +GVSKG +++L + G S + V+ GD +D +M E+ VA
Sbjct: 172 VVSSGPYSIEITAKGVSKGSALQSLAEAL---GISLEDVIAFGDGMNDIEMLEAAGYGVA 228
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
| >gnl|CDD|215317 PLN02580, PLN02580, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.003
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 46/288 (15%)
Query: 575 HIASAYNKTNSRLILLDYDGTVMPQTSEDKRP--STEVLSILNDLCNDPKNAVFIVSGRG 632
IA+ + K + LDYDGT+ P + R S + S + ++ A I+SGR
Sbjct: 110 QIAN-FAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKYFPTA--IISGRS 166
Query: 633 KDSLGNWFSGVEKLGLSAEHGY----FTRWSKNSAWEICSLTRDFDWKEI---------- 678
+D + G+ +L + HG R S ++ C + D KE+
Sbjct: 167 RDKVYE-LVGLTELYYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFL 225
Query: 679 --AEPVMKLYTETTD---GSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEP 733
+ V + E+T G+ +E+ + + H+++ D A+ + D L+
Sbjct: 226 PMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPLVAQCVHDVLKKY---PR 282
Query: 734 VVVKRGQHIVEVKPQ-GVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ- 791
+ + G+ ++EV+P +KG V+ L+ ++ + IGDDR+DED F+ + +
Sbjct: 283 LRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREG 342
Query: 792 ----AVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLAT 835
+ SVP K S A Y L D +EV+ L+ L T
Sbjct: 343 NRGYGILVSSVP------------KESNAFYSLRDPSEVMEFLKSLVT 378
|
Length = 384 |
| >gnl|CDD|234910 PRK01158, PRK01158, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.004
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 16/87 (18%)
Query: 745 VKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFE----SIEQAVADPSVPG 800
+K GV+KG +K L M G P+ V IGD +D +MFE + A AD +
Sbjct: 151 IKSPGVNKGTGLKKLAELM---GIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKE 207
Query: 801 IAEVFACTVGQKPSMAKYYLDDTAEVI 827
A+ V +K Y + AE I
Sbjct: 208 AADY----VTEKS-----YGEGVAEAI 225
|
Length = 230 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 854 | |||
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 100.0 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 100.0 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 100.0 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 100.0 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 100.0 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 100.0 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 99.97 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 99.97 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 99.97 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 99.97 | |
| PLN03017 | 366 | trehalose-phosphatase | 99.97 | |
| PLN02151 | 354 | trehalose-phosphatase | 99.97 | |
| PLN02580 | 384 | trehalose-phosphatase | 99.97 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.94 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.93 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.93 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.93 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.93 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.92 | |
| PLN02887 | 580 | hydrolase family protein | 99.91 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.91 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.91 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.91 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.91 | |
| PLN02316 | 1036 | synthase/transferase | 99.91 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.9 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.9 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.9 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.9 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.9 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.89 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.89 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.89 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.89 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.89 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.89 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.88 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.88 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.88 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.88 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.87 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.87 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.87 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.86 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.86 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.86 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.86 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.86 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.86 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.86 | |
| PLN00142 | 815 | sucrose synthase | 99.86 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.86 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.86 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.85 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.84 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.84 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.84 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.84 | |
| PLN02423 | 245 | phosphomannomutase | 99.84 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.83 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.83 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.83 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.83 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.83 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.82 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.82 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.82 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.82 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.81 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.81 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.81 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.81 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.81 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.81 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.81 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.8 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.8 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.8 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 99.79 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.79 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.79 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.79 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.79 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.79 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.79 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.77 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.77 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.77 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.76 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 99.75 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.75 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.75 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.74 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.74 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.73 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.72 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.72 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.71 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.71 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.7 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 99.69 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.67 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.67 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.65 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.61 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.54 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.46 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 99.46 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.42 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.35 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.25 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.25 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.19 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.16 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.15 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.14 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.09 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.08 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.08 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.01 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.99 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 98.93 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 98.89 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.88 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 98.85 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 98.83 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.81 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.8 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 98.78 | |
| PF03332 | 220 | PMM: Eukaryotic phosphomannomutase; InterPro: IPR0 | 98.77 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.75 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 98.73 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 98.71 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.71 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 98.69 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 98.69 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 98.68 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 98.68 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.66 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 98.62 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.6 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 98.58 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 98.53 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 98.53 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 98.52 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 98.46 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 98.43 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.43 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.42 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 98.4 | |
| PRK06769 | 173 | hypothetical protein; Validated | 98.37 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 98.36 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 98.33 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 98.33 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 98.33 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.32 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 98.3 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.29 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 98.29 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 98.29 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 98.27 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 98.26 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 98.25 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 98.23 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.23 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.15 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.15 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 98.11 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 98.06 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 98.05 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 98.03 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.01 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 97.95 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 97.94 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 97.93 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.93 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 97.89 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 97.86 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 97.83 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 97.82 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 97.82 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.79 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 97.76 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 97.74 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 97.73 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 97.71 | |
| PLN02940 | 382 | riboflavin kinase | 97.69 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 97.68 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 97.68 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 97.65 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.55 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 97.49 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 97.45 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 97.45 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 97.44 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.4 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 97.38 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 97.27 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.24 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.2 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.2 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 97.19 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 97.14 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 97.14 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 97.13 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 97.08 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 97.06 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 97.06 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 96.96 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 96.93 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 96.81 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 96.75 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 96.6 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 96.57 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 96.48 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 96.48 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 96.42 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 96.4 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 96.38 | |
| PRK08238 | 479 | hypothetical protein; Validated | 96.38 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 96.36 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 96.31 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 96.3 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 96.29 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 96.29 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 96.29 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 96.19 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 96.17 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 96.16 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 95.93 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 95.9 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 95.73 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 95.59 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 95.58 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 95.45 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 95.4 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 95.39 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 95.38 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 95.15 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 95.14 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 95.05 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 95.02 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 95.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 94.79 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 94.71 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.59 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 94.58 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 94.55 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 94.5 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 94.35 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 94.29 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 94.28 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 94.21 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 94.2 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 93.97 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 93.94 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 93.85 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 93.78 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 93.65 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 93.28 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 93.27 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 93.27 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 93.26 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 93.15 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 93.12 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 92.61 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 92.33 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 91.85 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 91.73 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 91.64 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 91.55 | |
| PLN02811 | 220 | hydrolase | 91.41 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 91.35 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 90.92 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 90.9 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 89.82 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 89.8 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 88.87 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 87.94 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 87.82 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 87.14 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 86.88 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 86.49 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 86.1 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 85.65 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 85.39 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 84.91 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 84.62 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 84.47 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 84.1 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 83.89 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 83.72 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 83.64 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 83.57 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 83.45 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 83.18 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 82.49 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 82.18 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 81.77 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 80.96 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 80.43 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 80.37 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 80.33 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 80.33 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 80.26 |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-184 Score=1644.45 Aligned_cols=836 Identities=66% Similarity=1.139 Sum_probs=781.1
Q ss_pred ccccccccccc--cCCCCcc-CCCccccccCccccccccCC-CCCC---CCCCCCCCcEEEEEcCCccceEEeCCC-Cce
Q 003042 2 RSSLDLLNLIS--FDDFGTL-NRIPGVMKVPGVISEFENKS-NDGT---TTIVEPCQRRIIVANQLPVKAYYEKDS-NKW 73 (854)
Q Consensus 2 ~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~iivsnrlP~~~~~~~~~-~~~ 73 (854)
|||+|||||++ +..++++ |++|++|++||+++++++++ ++.+ +++..+.+|+||||||||+.++++++| ++|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rliiVsnrlPv~~~~~~~g~~~~ 83 (854)
T PLN02205 4 RSYSNLLELASGESPSFGRMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKDRIIIVANQLPIRAQRKSDGSKGW 83 (854)
T ss_pred hhhccHHHhccCCcccccccccCCCceecCCCcccccccccccccccccccCCCCCCcEEEEEccCceEEEEcCCCCcce
Confidence 79999999999 5677776 99999999999999999876 3332 346677789999999999999987554 589
Q ss_pred EEEecCCchhhhhhccCCC-CCCeEEEecCCcccCCcchhhHHHhhhcCeeEEEEeCChhhhhhhhcccccccccccccc
Q 003042 74 GFEYDQDSLYLQLKDGFPL-ETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHY 152 (854)
Q Consensus 74 ~~~~~~~~l~~~l~~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~gf~~~~lwp~~H~ 152 (854)
+|++++|||+++|++++.. ..+++||||+|.++++++|+++.+.++++|+|+|||+++++++.||+||||++|||+|||
T Consensus 84 ~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LWPlfH~ 163 (854)
T PLN02205 84 IFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHY 163 (854)
T ss_pred EEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEeeCCHHHHHHHHHhhhhccccchhcc
Confidence 9999999999999988864 378999999998888888888878888899999999999999999999999999999999
Q ss_pred cCCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhh
Q 003042 153 MLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYR 232 (854)
Q Consensus 153 ~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~ 232 (854)
+++..|+++.+|+++.|++|++||++||++|++.++|++|+|||||||||+||+|||+++|+++||||||||||++|+||
T Consensus 164 ~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~eifr 243 (854)
T PLN02205 164 MLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYK 243 (854)
T ss_pred CCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChHHHh
Confidence 98888877779999999999999999999999999986799999999999999999999999999999999999999999
Q ss_pred cCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchH
Q 003042 233 TLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVT 312 (854)
Q Consensus 233 ~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~ 312 (854)
+||+|+|||+|||+||+|||||++|+|||++||+|+||++++..+|+++++|+||+++|+++|+|||++.|...+..|++
T Consensus 244 ~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~ 323 (854)
T PLN02205 244 TLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPET 323 (854)
T ss_pred hCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhH
Confidence 99999999999999999999999999999999999999999988888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHcC--CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHH
Q 003042 313 GQKVKELKEKFD--GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAE 390 (854)
Q Consensus 313 ~~~~~~l~~~~~--~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~ 390 (854)
.+++++++++++ |+++|+||||+|++|||.+||+||++||++||+|+||++||||++|+|+++++|++++++++++|+
T Consensus 324 ~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~ 403 (854)
T PLN02205 324 EAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVK 403 (854)
T ss_pred HHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHH
Confidence 999999999995 799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceE
Q 003042 391 EINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVI 470 (854)
Q Consensus 391 ~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~l 470 (854)
+||++||+.+|+||+|+.+.++++|+.|||++||||++||+|||||||++||++||++++.++++++.++++ +++|+|
T Consensus 404 rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~--~~~gvL 481 (854)
T PLN02205 404 RINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPST--PKKSML 481 (854)
T ss_pred HHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCcccccccccccccc--CCCCce
Confidence 999999999999999999999999999999999999999999999999999999999887777777766654 468999
Q ss_pred EEecCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHHHHHhcccccc
Q 003042 471 IVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERACRDHLFKRC 550 (854)
Q Consensus 471 V~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~~~~ 550 (854)
|+|||+||+++|++|++|||||++++|+||.+||+||++||+.|+++++++|++||+.+|+++||++|.++|+++.+++|
T Consensus 482 iLSEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~~ 561 (854)
T PLN02205 482 VVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRRC 561 (854)
T ss_pred EeeeccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888899
Q ss_pred cccCCCcceeEeecCccccccCHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcC
Q 003042 551 WGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG 630 (854)
Q Consensus 551 ~~~g~~~~~~~~~~~~~f~~l~~~~i~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TG 630 (854)
|++|||++||+++++|+|++|+++.++++|+++++|+|++||||||++..+....++++++++|++||.++|+.|+|+||
T Consensus 562 ~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSG 641 (854)
T PLN02205 562 WGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSA 641 (854)
T ss_pred cccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeC
Confidence 99999999999999999999999999999999999999999999999854445688999999999999999999999999
Q ss_pred CCccchhhhhcCCcccceeecCcEEEEECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCC
Q 003042 631 RGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHAD 710 (854)
Q Consensus 631 R~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d 710 (854)
|++..+++||+.+++++++|+||++++.+++..|.......+..|++.+..+++.|+++++|+++|.|+.++.|||+++|
T Consensus 642 R~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~ad 721 (854)
T PLN02205 642 RSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDAD 721 (854)
T ss_pred CCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCC
Confidence 99999999998887899999999999999888897655544567999999999999999999999999999999999999
Q ss_pred CccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhh
Q 003042 711 PHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIE 790 (854)
Q Consensus 711 ~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag 790 (854)
|+++.++++++.++++..+.+.++.+.+|+.++||+|+|+|||.|++.+++.+...|+++++++||||+.||++||+.++
T Consensus 722 pd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 722 PDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred hHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhh
Confidence 99998899999999999888888889999999999999999999999998765444899999999999999999999998
Q ss_pred hhcCCCCCCCCccEEEEEecCCCcccceEeCCHhHHHHHHHHHHhccCC
Q 003042 791 QAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATESVH 839 (854)
Q Consensus 791 ~~~~~~~~~~~~~~~aV~vG~~~s~A~y~l~~~~eV~~~L~~l~~~~~~ 839 (854)
....+..++..++.|+|+||.++|+|+|+++++++|.++|+.|++.+.+
T Consensus 802 ~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~lL~~L~~~~~~ 850 (854)
T PLN02205 802 SSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVRLMQGLASVSEQ 850 (854)
T ss_pred hhccCCcccccccceeEEECCCCccCeEecCCHHHHHHHHHHHHhcchh
Confidence 5444455667778899999999999999999999999999999987654
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-156 Score=1388.92 Aligned_cols=747 Identities=37% Similarity=0.661 Sum_probs=669.8
Q ss_pred CCcEEEEEcCCccceEEeCCCCceEEEecCCchhhhhhccCCCCCCeEEEecCCcccCCc-chhhHHHhhhcCeeEEEEe
Q 003042 50 CQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVD-DQEEVSTILLEKFKCVPTF 128 (854)
Q Consensus 50 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~pv~ 128 (854)
..|+||||||||+.++++++ |+|+++++.|||+++|.+ + +..+++||||+|..++.+ +++.+.. .+.+|+|+|||
T Consensus 93 ~~rlIiVSNRlPv~~~~~~~-g~~~~~~s~GGLvsaL~~-~-~~~~~~WVGw~g~~~~~~~~~~~~~~-~l~~~~~~pV~ 168 (934)
T PLN03064 93 RQRLLVVANRLPVSAVRRGE-DSWSLEISAGGLVSALLG-V-KEFEARWIGWAGVNVPDEVGQKALTK-ALAEKRCIPVF 168 (934)
T ss_pred CCCEEEEECCCCcceeecCC-CceEEeECCCCcHHHhcc-c-ccCCeEEEeeCCCCCCCcchhHHHHH-HhccCceEEEe
Confidence 68999999999999988765 589999999999999975 5 568999999999876653 4555544 45789999999
Q ss_pred CChhhhhhhhcccccccccccccccC-CCCC-CCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHH
Q 003042 129 LPADVHKKYYHGFCKHYLWPLFHYML-PLTA-SHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPS 206 (854)
Q Consensus 129 l~~~~~~~~y~gf~~~~lwp~~H~~~-~~~~-~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~ 206 (854)
|++++++.||+||||++|||+|||+. +..+ ....+|+++.|++|++||++||++|++.++| +|+|||||||||+||+
T Consensus 169 l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-gD~VWVHDYHL~LlP~ 247 (934)
T PLN03064 169 LDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEE-GDVVWCHDYHLMFLPK 247 (934)
T ss_pred CCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHH
Confidence 99999999999999999999999973 2111 0114688899999999999999999999998 4999999999999999
Q ss_pred HHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECC
Q 003042 207 FLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFG 286 (854)
Q Consensus 207 ~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~g 286 (854)
|||+++|+++||||||||||++|+|||||+|++||+|||+||+|||||++|+|||++||.|+||++.... ++.++|
T Consensus 248 ~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~----~v~~~G 323 (934)
T PLN03064 248 CLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GVEDQG 323 (934)
T ss_pred HHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCC----eEEECC
Confidence 9999999999999999999999999999999999999999999999999999999999999999886542 588999
Q ss_pred eEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 003042 287 RTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (854)
Q Consensus 287 r~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 366 (854)
|.++|.++|+|||++.|...+..+++.+++++++++++|+++||||||||+.|||.++|+||++||++||+|++++||||
T Consensus 324 r~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQ 403 (934)
T PLN03064 324 RLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQ 403 (934)
T ss_pred EEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeee
Q 003042 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (854)
Q Consensus 367 i~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~ 446 (854)
|+.|+|+++++|+++++++.++|++||++||+.+|.||+|+.+.++++|+.|||++|||||+||+|||||||++||||||
T Consensus 404 Ia~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~ 483 (934)
T PLN03064 404 IAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (934)
T ss_pred EcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEecCccccccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhcccccc
Q 003042 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSH 525 (854)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 525 (854)
.+ +.|+||+|||+|++++| .+|++|||||++++|+||.+||+|+++||+.|+++++++|.+|
T Consensus 484 ~~-----------------~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~ 546 (934)
T PLN03064 484 DS-----------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTH 546 (934)
T ss_pred cC-----------------CCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccC
Confidence 73 47999999999999999 5899999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHhcccccccccCCCcceeEeecCccccccCHHHHHHHHhhcCCeEEEEecCCCCCCCCCC---
Q 003042 526 DVAYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTSE--- 602 (854)
Q Consensus 526 ~~~~W~~~~l~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~f~~l~~~~i~~~y~~~~~klI~~DlDGTLl~~~~~--- 602 (854)
|+.+|+++|+++|.++..++..+ +. . .+.+|+++.+.++|++++.++|++||||||++..+.
T Consensus 547 d~~~Wa~~fl~~L~~~~~~~~~~-~~-----------~---~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~ 611 (934)
T PLN03064 547 TAQEWAETFVSELNDTVVEAQLR-TR-----------Q---VPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGR 611 (934)
T ss_pred CHHHHHHHHHHHHHHHHhhhhcc-cc-----------c---cCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCccc
Confidence 99999999999999986554211 11 1 124789999999999999999999999999985422
Q ss_pred --------CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceEEc-cccccc
Q 003042 603 --------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEIC-SLTRDF 673 (854)
Q Consensus 603 --------~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~~~-~~~~~~ 673 (854)
...++++++++|++||.++++.|+|+|||+...++.|++.+ +++++|+||++++.++ ..|... ....+.
T Consensus 612 ~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~-~L~LaAEHG~~~R~~~-~~w~~~~~~~~~~ 689 (934)
T PLN03064 612 RGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF-DMWLAAENGMFLRHTK-GEWMTTMPEHLNM 689 (934)
T ss_pred ccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC-CceEEeeCCeEEecCC-Ccceeccccccch
Confidence 23478999999999999999999999999999999999887 7999999999998764 478743 333355
Q ss_pred hHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHH-HHhcCCCEEEEEcCeEEEEeeCCcch
Q 003042 674 DWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLE-NVLANEPVVVKRGQHIVEVKPQGVSK 752 (854)
Q Consensus 674 ~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~-~~l~~~~~~v~~g~~~vEI~p~gvsK 752 (854)
.|++.+..++++|++++||+++|.|+++++|||+++||+++..|++++.+++. ..+.+.++.+..|+.++||+|.|+||
T Consensus 690 ~W~~~v~~ile~~~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnK 769 (934)
T PLN03064 690 DWVDSVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTK 769 (934)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCH
Confidence 89999999999999999999999999999999999999999999999999984 44556678999999999999999999
Q ss_pred HHHHHHHHHHHhhCC---CCCCeEEEEeCCcc-cHHHHHHhhhhcCC-------------------------------CC
Q 003042 753 GIVVKNLISTMRSRG---KSPDFVLCIGDDRS-DEDMFESIEQAVAD-------------------------------PS 797 (854)
Q Consensus 753 g~al~~ll~~l~~~g---i~~d~vlaiGDs~N-D~~Mf~~ag~~~~~-------------------------------~~ 797 (854)
|.|++.+++++...+ .++|||+|+||+.. ||+||+++...... +.
T Consensus 770 G~Av~~ll~~~~~~~~~~~~~DFvlc~GDd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (934)
T PLN03064 770 GAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNS 849 (934)
T ss_pred HHHHHHHHHhhhhccccCCCCCEEEEeCCCCCCcHHHHHHHhccCCcccccccccccCCcccCCccccccCCCccccccc
Confidence 999999999763222 36899999999875 99999998542110 00
Q ss_pred ----------------------------------------C-CCCccEEEEEecCCCcccceEeCCHhHHHHHHHHHHhc
Q 003042 798 ----------------------------------------V-PGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLATE 836 (854)
Q Consensus 798 ----------------------------------------~-~~~~~~~aV~vG~~~s~A~y~l~~~~eV~~~L~~l~~~ 836 (854)
+ -...+.|+|+||.+.+.|+|++++.+||+.+|+.|++.
T Consensus 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (934)
T PLN03064 850 KNSQGKKQRSLLSSAKSGVNHAASHGSDRRPSPEKIGWSVLDLKGENYFSCAVGRKRSNARYLLGSSDDVVSFLKELANA 929 (934)
T ss_pred cccccccCCcccccccccccccccCCccccCCccccccccccccCcceEEEEeccccccceeecCCHHHHHHHHHHHhcc
Confidence 0 01345699999999999999999999999999999987
Q ss_pred cCC
Q 003042 837 SVH 839 (854)
Q Consensus 837 ~~~ 839 (854)
+..
T Consensus 930 ~~~ 932 (934)
T PLN03064 930 SSS 932 (934)
T ss_pred ccC
Confidence 654
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-148 Score=1334.57 Aligned_cols=749 Identities=36% Similarity=0.659 Sum_probs=666.0
Q ss_pred CCCCcEEEEEcCCccceEEeCCCCceEEEecCCchhhhhhccCCCCCCeEEEecCCcccCCc-chhhHHHhhhcCeeEEE
Q 003042 48 EPCQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVD-DQEEVSTILLEKFKCVP 126 (854)
Q Consensus 48 ~~~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~p 126 (854)
....|+||||||||+.+.++++ |+|++++++|||+++|.+ +. ..+++||||+|.+++++ ++..+.. .+.+|+|+|
T Consensus 8 ~~~~rliiVsnrlp~~~~~~~~-~~~~~~~~~ggl~~al~~-~~-~~~~~Wvgw~g~~~~~~~~~~~~~~-~~~~~~~~p 83 (797)
T PLN03063 8 GERPRLLVVANRLPVSAKRTGE-DSWSLEMSPGGLVSALLG-VK-EFETKWIGWPGVDVHDEIGKAALTE-SLAEKGCIP 83 (797)
T ss_pred cCCCCEEEEECCCCccceecCC-CceEEeeCCCCHHHHHHH-HH-hcCceEEEeCCCcCCcccchhHHHH-HhhcCCeEE
Confidence 4678999999999999887654 689999999999999975 44 57999999999876544 3444433 467899999
Q ss_pred EeCChhhhhhhhccccccccccccccc-CCCCCC-CCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchH
Q 003042 127 TFLPADVHKKYYHGFCKHYLWPLFHYM-LPLTAS-HGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVL 204 (854)
Q Consensus 127 v~l~~~~~~~~y~gf~~~~lwp~~H~~-~~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~ll 204 (854)
||| +++++.||+||||++|||+|||+ .+..+. ...+|+++.|++|++||++||++|++.++| +|+|||||||||+|
T Consensus 84 v~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWvhDYhL~ll 161 (797)
T PLN03063 84 VFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEE-GDVVWCHDYHLMFL 161 (797)
T ss_pred eeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhhH
Confidence 999 99999999999999999999998 232221 114566789999999999999999999998 49999999999999
Q ss_pred HHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEE
Q 003042 205 PSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDY 284 (854)
Q Consensus 205 p~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~ 284 (854)
|+|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|+|||+++|+|++|+++... .+.+
T Consensus 162 p~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~----~i~~ 237 (797)
T PLN03063 162 PQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GVVD 237 (797)
T ss_pred HHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCC----ceEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999886543 4779
Q ss_pred CCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEE
Q 003042 285 FGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVL 364 (854)
Q Consensus 285 ~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvL 364 (854)
+|+.++|.++|+|||++.|......+++.+...+++++++++++|++|||+|+.||+.++|+||++|++++|+++++++|
T Consensus 238 ~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvL 317 (797)
T PLN03063 238 QGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVML 317 (797)
T ss_pred CCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEE
Confidence 99999999999999999999877777777778889999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeee
Q 003042 365 VQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTV 444 (854)
Q Consensus 365 vqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a 444 (854)
|||+.|+|+++++|+++++++++++++||++||+.+|.||+++.+.++.+++.++|++|||||+||++||||||++||||
T Consensus 318 vqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA 397 (797)
T PLN03063 318 VQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVA 397 (797)
T ss_pred EEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCCCCCceEEEecCccccccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhcccc
Q 003042 445 SRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS 523 (854)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 523 (854)
||.+ +.|++|+|||+|+++++ .+|++|||||++++|+||.++|+|+++||+.|+++++++|.
T Consensus 398 ~g~p-----------------~~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~ 460 (797)
T PLN03063 398 CQKA-----------------KKGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVK 460 (797)
T ss_pred eecC-----------------CCCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhh
Confidence 9862 46899999999999999 48999999999999999999999999999999999999999
Q ss_pred ccChHHHHHHHHHHHHHHHHhcccccccccCCCcceeEeecCccccccCHHHHHHHHhhcCCeEEEEecCCCCCCCCC--
Q 003042 524 SHDVAYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTS-- 601 (854)
Q Consensus 524 ~~~~~~W~~~~l~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~f~~l~~~~i~~~y~~~~~klI~~DlDGTLl~~~~-- 601 (854)
+||+.+|+++|+++|.++++++..+. ...+.+|+.+.+.++|++++.++|++||||||++..+
T Consensus 461 ~~~~~~Wa~~fl~~l~~~~~~~~~~~---------------~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~ 525 (797)
T PLN03063 461 THSAQKWADDFMSELNDIIVEAELRT---------------RNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQ 525 (797)
T ss_pred hCCHHHHHHHHHHHHHHHhhhhhhcc---------------cCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCc
Confidence 99999999999999999887653211 0234579999999999999999999999999998543
Q ss_pred ---CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceEEccc-cccchHHH
Q 003042 602 ---EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSL-TRDFDWKE 677 (854)
Q Consensus 602 ---~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~~~~~-~~~~~~~~ 677 (854)
....++++++++|++||.++++.|+|+|||+...+++|++.+ +++++|+||++++.+ +..|..... ..+..|++
T Consensus 526 ~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~-~l~l~aeHG~~~r~~-~~~w~~~~~~~~~~~w~~ 603 (797)
T PLN03063 526 IKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY-NIWLAAENGMFLRHT-SGEWVTTMPEHMNLDWVD 603 (797)
T ss_pred cccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC-CCcEEEeCCEEEecC-CCceeeccccccChhHHH
Confidence 224588999999999999999999999999999999999875 799999999999876 457875432 33567999
Q ss_pred HHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHH-HhcCCCEEEEEcCeEEEEeeCCcchHHHH
Q 003042 678 IAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLEN-VLANEPVVVKRGQHIVEVKPQGVSKGIVV 756 (854)
Q Consensus 678 ~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~-~l~~~~~~v~~g~~~vEI~p~gvsKg~al 756 (854)
.+.++++.|++++||+++|.|++++.|||+++||+++..++.++.+++.+ .+.+.++.+..|+.++||+|.|+|||.|+
T Consensus 604 ~v~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av 683 (797)
T PLN03063 604 GVKNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAI 683 (797)
T ss_pred HHHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHH
Confidence 99999999999999999999999999999999999998999999999844 44566789999999999999999999999
Q ss_pred HHHHHHHhhC---CCCCCeEEEEeCCc-ccHHHHHHhhhhcCC--------C-----------CCCCCccEEEEEecCCC
Q 003042 757 KNLISTMRSR---GKSPDFVLCIGDDR-SDEDMFESIEQAVAD--------P-----------SVPGIAEVFACTVGQKP 813 (854)
Q Consensus 757 ~~ll~~l~~~---gi~~d~vlaiGDs~-ND~~Mf~~ag~~~~~--------~-----------~~~~~~~~~aV~vG~~~ 813 (854)
+.+++++... +..+|+++|+||+. .||+||++++..... . .....+++|+|+||.++
T Consensus 684 ~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~~~ 763 (797)
T PLN03063 684 GRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQAR 763 (797)
T ss_pred HHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceEEEEECCCC
Confidence 9999976221 23689999999985 699999998642100 0 01234578999999999
Q ss_pred cccceEeCCHhHHHHHHHHHHhccCCC
Q 003042 814 SMAKYYLDDTAEVINLLEGLATESVHS 840 (854)
Q Consensus 814 s~A~y~l~~~~eV~~~L~~l~~~~~~~ 840 (854)
|+|+|+|++++||.++|+.|+..+...
T Consensus 764 s~A~y~l~~~~eV~~lL~~l~~~~~~~ 790 (797)
T PLN03063 764 TKARYVLDSSNDVVSLLHKLAVANTTM 790 (797)
T ss_pred ccCeecCCCHHHHHHHHHHHhccCccc
Confidence 999999999999999999999866543
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-140 Score=1268.38 Aligned_cols=720 Identities=36% Similarity=0.665 Sum_probs=655.7
Q ss_pred CcEEEEEcCCccceEEeCCCCceEEEecCCchhhhhhccCCCCCCeEEEecCCcccCC---cchhhHHHhhhcCeeEEEE
Q 003042 51 QRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGV---DDQEEVSTILLEKFKCVPT 127 (854)
Q Consensus 51 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~---~~~~~~~~~~~~~~~~~pv 127 (854)
+||||||||+|+.+++++ |+|++++++|||+.+|.+.+. ..+++||||+|.+.+. +++.++. ..+.+|+|+||
T Consensus 1 ~~livvsnr~p~~~~~~~--~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~g~~~~~~~~~~~~~~~-~~~~~~~~~~v 76 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED--GGVELTPSVGGLATGLRSFHE-RGGGLWVGWPGLDLEEESEEQRARIE-PRLEELGLVPV 76 (726)
T ss_pred CCEEEEEcCCCcceeecC--CceEEeeCCCchHHHHHHHhh-cCCeEEEEeCCCCccccchhhhhhhh-hhccCceEEEE
Confidence 489999999999988754 379999999999999987665 5789999999976543 2223333 34678999999
Q ss_pred eCChhhhhhhhcccccccccccccccCCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHH
Q 003042 128 FLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSF 207 (854)
Q Consensus 128 ~l~~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~ 207 (854)
|+++++++.||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++|+ |+|||||||||+||++
T Consensus 77 ~l~~~~~~~~y~gf~n~~lWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~~~~~~~~~-d~vwvhDYhl~l~p~~ 150 (726)
T PRK14501 77 FLSAEEVDRYYEGFCNSTLWPLFHYFPEY-----TEFEDRFWESYERVNQRFAEAIAAIARPG-DVVWVHDYQLMLLPAM 150 (726)
T ss_pred eCCHHHHHHHHHHhhhccccchhcccCcc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEeCchhhhHHHH
Confidence 99999999999999999999999999876 57999999999999999999999999984 9999999999999999
Q ss_pred HHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCe
Q 003042 208 LRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGR 287 (854)
Q Consensus 208 lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr 287 (854)
||++.|+++||||||+|||++|+|++||+|++||+|||+||+|||||++|++||++||.|++++++... .+.++||
T Consensus 151 lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~----~~~~~gr 226 (726)
T PRK14501 151 LRERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELG----EIRLGGR 226 (726)
T ss_pred HHhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCC----eEEECCE
Confidence 999999999999999999999999999999999999999999999999999999999999999875432 5889999
Q ss_pred EEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 003042 288 TVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQI 367 (854)
Q Consensus 288 ~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi 367 (854)
.++|.++|+|||++.|.+....+.+.+..+++++.++++++|++|||+++.||+..+|+||++|++++|+++++++|+||
T Consensus 227 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v 306 (726)
T PRK14501 227 IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQV 306 (726)
T ss_pred EEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEE
Confidence 99999999999999999888778887888889999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeec
Q 003042 368 TNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (854)
Q Consensus 368 ~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~ 447 (854)
+.|+|.+.++|+++++++.+++++||++||+.+|.|++++.+.++++|++++|++|||||+||++||||||++||||||.
T Consensus 307 ~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~ 386 (726)
T PRK14501 307 AVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRT 386 (726)
T ss_pred ecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcC
Confidence 99998888999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCccccccCCCCCCCCCCCceEEEecCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccCh
Q 003042 448 GSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDV 527 (854)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~ 527 (854)
+ +.|++|+|+++|+++++.+|++|||||++++|+||.++|+|+.+|++.|++++++++.+||+
T Consensus 387 ~-----------------~~g~~vls~~~G~~~~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~ 449 (726)
T PRK14501 387 D-----------------GDGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDV 449 (726)
T ss_pred C-----------------CCceEEEecccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCH
Confidence 3 35899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccCCCcceeEeecCccccccCHHHHHHHHhhcCCeEEEEecCCCCCCCCC--CCCC
Q 003042 528 AYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTS--EDKR 605 (854)
Q Consensus 528 ~~W~~~~l~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~f~~l~~~~i~~~y~~~~~klI~~DlDGTLl~~~~--~~~~ 605 (854)
..|+++|++++.++++++.... +..|+.|+++.+.++|+.+++|+|+|||||||++... ....
T Consensus 450 ~~w~~~~l~~l~~~~~~~~~~~---------------~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~ 514 (726)
T PRK14501 450 HKWASDFLDELREAAEKNKAFA---------------SKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAV 514 (726)
T ss_pred HHHHHHHHHHHHHHHhhhhccc---------------cccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCC
Confidence 9999999999999887653211 1235678999999999999999999999999998431 3356
Q ss_pred CCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceEEccccccchHHHHHHHHHHH
Q 003042 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKL 685 (854)
Q Consensus 606 is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 685 (854)
++++++++|++|++++|+.|+|+|||+...++++++.+ +++++++||++++.++ ..|..... .+..|++.+.++++.
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~-~l~liaenG~~i~~~~-~~w~~~~~-~~~~w~~~v~~il~~ 591 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL-PIHLVAEHGAWSRAPG-GEWQLLEP-VATEWKDAVRPILEE 591 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCC-CeEEEEeCCEEEeCCC-CceEECCC-cchhHHHHHHHHHHH
Confidence 89999999999977789999999999999999999876 5789999999998664 46765432 356799999999999
Q ss_pred HhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhh
Q 003042 686 YTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRS 765 (854)
Q Consensus 686 y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~ 765 (854)
|.++++|++++.++..+.|||++++++++..+++++.++++..+.+..+.+..|+.++||+|+++|||.|++.+++
T Consensus 592 ~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~---- 667 (726)
T PRK14501 592 FVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLE---- 667 (726)
T ss_pred HHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHh----
Confidence 9999999999999999999999999988888888899999888877788889999999999999999999999998
Q ss_pred CCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCCcccceEeCCHhHHHHHHHHHHh
Q 003042 766 RGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLAT 835 (854)
Q Consensus 766 ~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~s~A~y~l~~~~eV~~~L~~l~~ 835 (854)
++++++++||||+.||++||+.++. ..++|+||++++.|+|+++++++|+++|+.|++
T Consensus 668 -~~~~d~vl~~GD~~nDe~Mf~~~~~-----------~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 668 -AGPYDFVLAIGDDTTDEDMFRALPE-----------TAITVKVGPGESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred -cCCCCEEEEECCCCChHHHHHhccc-----------CceEEEECCCCCcceEeCCCHHHHHHHHHHHhc
Confidence 5789999999999999999999753 138999999999999999999999999999875
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-127 Score=1119.26 Aligned_cols=728 Identities=54% Similarity=0.932 Sum_probs=683.9
Q ss_pred CCcEEEEEcCCccceEEeCCCCceEEEecCCchhhhhhccCCCCCCeEEEecCCcccCCcchhhHHHhhhcCeeEEEEeC
Q 003042 50 CQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFL 129 (854)
Q Consensus 50 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l 129 (854)
..|+|+|||+||+.+.++.+++.|.|+++.+|++.++..++. ..+..||||++.++++++++.+.+.++..++|+||++
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~ 80 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFR-EMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFL 80 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccc-cceeeEEeeccccCchhhHhHhhhhhhhhcCceeeec
Confidence 579999999999999766677799999999999999988766 5889999999988899999999999999999999999
Q ss_pred Chhhhhhhhccccccccccccccc-CCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHH
Q 003042 130 PADVHKKYYHGFCKHYLWPLFHYM-LPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFL 208 (854)
Q Consensus 130 ~~~~~~~~y~gf~~~~lwp~~H~~-~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~l 208 (854)
+++....+|+||||++|||+|||+ .+..+.+. .|+.+.|++|+++|++|||++++.++ ++|+|||||||||++|+++
T Consensus 81 ~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~-~~~~~~w~~y~~~n~~f~d~ive~~~-~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 81 DDELFDSYYNGYCKSILWPLFHYMLIPSEPAFK-LFDLELWKAYVKVNQAFADKIVEVYE-EGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CCchhhhhhhhhhhhcccceeecccCCCchhhh-hhHHHHHHHHHHHhHHHHHHHHHhcc-CCCcEEEEcchhhccchhh
Confidence 999999999999999999999999 56655553 77899999999999999999999999 5799999999999999999
Q ss_pred HhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeE
Q 003042 209 RKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRT 288 (854)
Q Consensus 209 r~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~ 288 (854)
|++.++++||||+|.|||++|+|||+|.|+||++||+++|+|||||++|+|||++||.|++|+++.+..+..++.+.||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999988888889999999
Q ss_pred EEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 003042 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQIT 368 (854)
Q Consensus 289 ~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~ 368 (854)
+.|.++|+|||+.+|......+.+..+..++++.++|+++|++|||+|+.||+.+++.||+++|++||+|+++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecC
Q 003042 369 NPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQG 448 (854)
Q Consensus 369 ~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~ 448 (854)
.|++++++++++++.++...+.+||++||+..++||+++...++..++.++|.+||||++++++|||||+++||++|+++
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999873
Q ss_pred CCccccccCCCCCCCCCCCceEEEecCccccccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccCh
Q 003042 449 SPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDV 527 (854)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~ 527 (854)
+.+++|+|||+|+++++ ++++++||||.+++|.+|..+|+|++++++.|+.++++++..|++
T Consensus 399 -----------------~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~ 461 (732)
T KOG1050|consen 399 -----------------KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDV 461 (732)
T ss_pred -----------------cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhH
Confidence 46999999999999999 889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccCCCcceeEeecCccccccCHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCCC
Q 003042 528 AYWAKSIDQDLERACRDHLFKRCWGVGLGLGFRIVALGPEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPS 607 (854)
Q Consensus 528 ~~W~~~~l~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~f~~l~~~~i~~~y~~~~~klI~~DlDGTLl~~~~~~~~is 607 (854)
..|+.+|++.+. ++|+.|+ +.+++..+ |+.+.+.+.|+++++|+|++|||||++...+..
T Consensus 462 ~~W~~~~~~~l~---------~~~~~~~-~~~~~~~~------l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~~~---- 521 (732)
T KOG1050|consen 462 VYWAKSFLQGLK---------RIWKVGF-LGFRVTPL------LTAEHIVSDYKKSKKRLILLDYDLTLIPPRSIK---- 521 (732)
T ss_pred HHHHHHHHHhhh---------hhhhhcc-cccccccc------cChhHhhhhhhhccceEEEecccccccCCCCch----
Confidence 999999999444 4566777 77777654 788999999999999999999999999833221
Q ss_pred HHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceEEccccccchHHHHHHHHHHHHh
Q 003042 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYT 687 (854)
Q Consensus 608 ~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~ 687 (854)
+...|+.||.++++.|+|+|||++..+..|+..++++|++||||++++.+++ |.... .+.+|++.+++++++|+
T Consensus 522 --~~~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~--w~~~~--~~~~w~~~v~~i~~~~~ 595 (732)
T KOG1050|consen 522 --AISILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK--WETCV--LDLDWKDLVKDIFQYYT 595 (732)
T ss_pred --HHHHHHHHhcCCCCeEEEEEccCchhhhhhccccccceeecccCceeccCCc--eeeec--ccccHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999889999999999999999988 99877 77899999999999999
Q ss_pred ccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCC
Q 003042 688 ETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRG 767 (854)
Q Consensus 688 ~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~g 767 (854)
++|||+++|.++.+++|||+++|++++.+|++|+.++|+. .+.++.+..|+..||+.|.|+|||.++..++..+ .
T Consensus 596 ert~GS~ie~k~~~l~~hy~~ad~~~g~~qA~el~~~l~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~---~ 670 (732)
T KOG1050|consen 596 ERTPGSYIERKETALVWHYRNADPEFGELQAKELLEHLES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEM---V 670 (732)
T ss_pred hcCCCceecccCceEEEeeeccCcchhHHHHHHHHHHhcc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhc---C
Confidence 9999999999999999999999999999999999999998 7889999999999999999999999999999998 5
Q ss_pred CCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCCcccceEeCCHhHHHHHHH
Q 003042 768 KSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLE 831 (854)
Q Consensus 768 i~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~s~A~y~l~~~~eV~~~L~ 831 (854)
.++|+++|+||+..|++||...........+ ...|+|++|.+++.|+|+++++.+|.++|+
T Consensus 671 ~~~df~~c~g~d~tDed~~~~~~~~~~~~~~---~~~F~~~~g~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 671 KEPDFVLCIGDDRTDEDMFEFISKAKDPEKV---EEIFACTVGQKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred CCcceEEEecCCCChHHHHHHHhhccCCccc---ceEEEEEcCCCCcccccccCChHHHHhhcc
Confidence 5679999999999999999998764322111 678999999999999999999999999875
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-120 Score=1018.28 Aligned_cols=456 Identities=29% Similarity=0.519 Sum_probs=420.9
Q ss_pred CcEEEEEcCCccceEEeCCCCceEEEecCCchhhhhhccCCCCCCeEEEecCCcccCCcchhhHHHhhhcCeeEEEEeCC
Q 003042 51 QRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFLP 130 (854)
Q Consensus 51 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~ 130 (854)
+|+||||||+|+.. + + +.++|||+++|.+.+. ..+++||||+|...++ .+.+......+++|.||+|+
T Consensus 2 ~rLivVSNRlp~~~-----~--~--~~~~GGL~~aL~~~l~-~~~g~WvGW~g~~~~~--~~~~~~~~~~~~~~~~v~L~ 69 (474)
T PRK10117 2 SRLVVVSNRIAPPD-----E--H--KASAGGLAVGILGALK-AAGGLWFGWSGETGNE--DQPLKKVKKGNITWASFNLS 69 (474)
T ss_pred CCEEEEECCCcCCC-----C--C--CcCCCCcHHHHHHHHH-hcCceEEEecCCCCCC--cccchhhhcCCceEEEecCC
Confidence 69999999999632 1 1 4467999999988775 4799999999964322 22233333467999999999
Q ss_pred hhhhhhhhcccccccccccccccCCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHh
Q 003042 131 ADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRK 210 (854)
Q Consensus 131 ~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~ 210 (854)
++++++||+||||++|||+|||+++. ..|+++.|++|++||++||++|++.++| +|+|||||||||+||++||+
T Consensus 70 ~~~~~~yY~gfsn~~LWPlfHy~~~~-----~~~~~~~w~~Y~~VN~~FA~~v~~~~~~-~D~VWVHDYhL~llp~~LR~ 143 (474)
T PRK10117 70 EQDYDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWEGYLRVNALLADKLLPLLKD-DDIIWIHDYHLLPFASELRK 143 (474)
T ss_pred HHHHHHHHhhhhhcchhhhhCCCCCc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeccHhhHHHHHHHH
Confidence 99999999999999999999999765 5899999999999999999999999998 49999999999999999999
Q ss_pred ccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEE
Q 003042 211 RFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVS 290 (854)
Q Consensus 211 ~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~ 290 (854)
+.|+++||||||||||++|+|++||+|+|||+|||+||+|||||++|++||++||++++|++.... ..+.++||.++
T Consensus 144 ~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~---~~v~~~gr~v~ 220 (474)
T PRK10117 144 RGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSG---KSHTAWGKAFR 220 (474)
T ss_pred hCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCC---CeEEECCeEEE
Confidence 999999999999999999999999999999999999999999999999999999999999886432 24678899999
Q ss_pred EEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 003042 291 IKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNP 370 (854)
Q Consensus 291 i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p 370 (854)
|+++|+|||++.|...+..+ ...+.++++++++++++|+||||+||+|||.++|+||++||++||+|+||++|+||+.|
T Consensus 221 v~~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~p 299 (474)
T PRK10117 221 TEVYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 299 (474)
T ss_pred EEEEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCC
Confidence 99999999999999887755 56678899999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCC
Q 003042 371 ARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSP 450 (854)
Q Consensus 371 ~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~ 450 (854)
+|+++++|++++++++++|++||++||+.+|.||+|+.+.++++++.|+|++|||+++||+|||||||++||+|||+.
T Consensus 300 sR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~-- 377 (474)
T PRK10117 300 SRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP-- 377 (474)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999872
Q ss_pred ccccccCCCCCCCCCCCceEEEecCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHH
Q 003042 451 VLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYW 530 (854)
Q Consensus 451 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W 530 (854)
+++|+||+|||+||+++|.+|++|||||++++|+||.+||+||.+||+.|+++++++|.+||+.+|
T Consensus 378 --------------~~~GvLILSefAGaA~~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W 443 (474)
T PRK10117 378 --------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHW 443 (474)
T ss_pred --------------CCCccEEEecccchHHHhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHH
Confidence 347999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 003042 531 AKSIDQDLERACRD 544 (854)
Q Consensus 531 ~~~~l~~l~~~~~~ 544 (854)
+++||.+|.++...
T Consensus 444 ~~~fL~~L~~~~~~ 457 (474)
T PRK10117 444 QECFISDLKQIVPR 457 (474)
T ss_pred HHHHHHHHHHhhhc
Confidence 99999999987543
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-119 Score=1018.13 Aligned_cols=462 Identities=26% Similarity=0.451 Sum_probs=427.9
Q ss_pred EEcCCccceEEeCCCC-ceEEEecCCchhhhhhccCCCCCCeEEEecCCcccCC-cch-hhHHHhhhcCeeEEEEeCChh
Q 003042 56 VANQLPVKAYYEKDSN-KWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGV-DDQ-EEVSTILLEKFKCVPTFLPAD 132 (854)
Q Consensus 56 vsnrlP~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~-~~~-~~~~~~~~~~~~~~pv~l~~~ 132 (854)
||||||+.++++++|+ +|++++++|||+++|.+.+.+..+++||||+|...++ ++. +.+......+|+|.||+|+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 7999999999876542 5888999999999999877655789999999975221 111 112212245799999999999
Q ss_pred hhhhhhcccccccccccccccCCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhcc
Q 003042 133 VHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRF 212 (854)
Q Consensus 133 ~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~ 212 (854)
+++.||+||||++|||+|||+++. ..|+++.|++|++||++||++|++.++| +|+|||||||||+||++||++.
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~-----~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWVhDYhL~llp~~LR~~~ 154 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPER-----FQFREDDWQVFLKVNRAFAEAACLEAAE-GATVWVHDYNLWLVPGYIRQLR 154 (487)
T ss_pred HHHHHHhhhhhccccccccCCccc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHHHHHHhC
Confidence 999999999999999999998654 5899999999999999999999999997 4999999999999999999999
Q ss_pred CCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCc--------------
Q 003042 213 HRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRG-------------- 278 (854)
Q Consensus 213 ~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~-------------- 278 (854)
|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|+||+++....+
T Consensus 155 ~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~ 234 (487)
T TIGR02398 155 PDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGE 234 (487)
T ss_pred CCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999988754321
Q ss_pred ---eeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhC
Q 003042 279 ---YIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQH 355 (854)
Q Consensus 279 ---~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~ 355 (854)
.+++.++||+++|+++|+|||++.|.+....+++.+.++++|++++++++|++|||+|+.|||.++|+||++||++|
T Consensus 235 ~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~ 314 (487)
T TIGR02398 235 ERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERR 314 (487)
T ss_pred cccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhC
Confidence 23588999999999999999999999988889999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCC
Q 003042 356 PDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGM 435 (854)
Q Consensus 356 p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~ 435 (854)
|+++|+++||||+.|+|++.++|++++++++++|++||++||+.+|+||+++.+.++++++.+||++||||++||+||||
T Consensus 315 Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGm 394 (487)
T TIGR02398 315 PELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGL 394 (487)
T ss_pred ccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 003042 436 NLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRH 515 (854)
Q Consensus 436 ~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~ 515 (854)
|||++||||||++ ++|+||+|||+|++++|.+|++|||||++++|+||.+||+||.+||+.|+
T Consensus 395 NLVa~Eyva~~~~-----------------~~GvLILSefaGaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~ 457 (487)
T TIGR02398 395 NLVAKEYVAAQGL-----------------LDGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARM 457 (487)
T ss_pred CcchhhHHhhhcC-----------------CCCCEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999873 47999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccccChHHHHHHHHHHHHH
Q 003042 516 EKHYKYISSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 516 ~~~~~~v~~~~~~~W~~~~l~~l~~ 540 (854)
++++++|.+||+.+|+++||.+|..
T Consensus 458 ~~l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 458 REMFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred HHHHHHHhhCCHHHHHHHHHHHhhh
Confidence 9999999999999999999999865
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-119 Score=1024.98 Aligned_cols=468 Identities=42% Similarity=0.801 Sum_probs=359.1
Q ss_pred CcEEEEEcCCccceEEeCCCCc--eEEEecCCchhhhhhccCCCCCCeEEEecCCcccCCcc--hhhHHHhhhcCeeEEE
Q 003042 51 QRRIIVANQLPVKAYYEKDSNK--WGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDD--QEEVSTILLEKFKCVP 126 (854)
Q Consensus 51 ~~~iivsnrlP~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~--~~~~~~~~~~~~~~~p 126 (854)
.|+||||||||+.+++++++|. |+++.+.|||+++|.+.+. ..+++||||+|...+..+ ++.+.+.+.++|+|+|
T Consensus 1 ~~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~l~~-~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~p 79 (474)
T PF00982_consen 1 ARLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDPLLK-KRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVP 79 (474)
T ss_dssp --------------------------GGGGS-HHHHHHHHHHH-HH-EEEEEEEEEES-TTS---EEEE---ETTEEEEE
T ss_pred CCcccccccccccccccccccccccccccCCCcHHHHHHHHHh-cCCCEEEEeCCCcCccccccccchhhhcccCceEEE
Confidence 3799999999999999874455 8888899999999976443 479999999998876544 5566667789999999
Q ss_pred EeCChhhhhhhhcccccccccccccccCCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHH
Q 003042 127 TFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPS 206 (854)
Q Consensus 127 v~l~~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~ 206 (854)
||+++++++.||+||||++|||+|||.++..+. ...|+.+.|++|++||++||++|++.++| +|+|||||||||+||+
T Consensus 80 V~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~-~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~D~VWVhDYhL~llP~ 157 (474)
T PF00982_consen 80 VFLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPD-LARFEEEWWEAYKRVNRRFADAIAEVYRP-GDLVWVHDYHLMLLPQ 157 (474)
T ss_dssp EEE-HHHHHHHTTTHHHHTHHHHHTT-GG-----G----HHHHHHHHHHHHHHHHHHGGG--T-T-EEEEESGGGTTHHH
T ss_pred EEcCHHHHHHHHHhhhhhccCcccccccccccc-cchhhHHHHHHHHHHHHHHHHHHHHhCcC-CCEEEEeCCcHHHHHH
Confidence 999999999999999999999999998762222 26899999999999999999999999997 5999999999999999
Q ss_pred HHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECC
Q 003042 207 FLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFG 286 (854)
Q Consensus 207 ~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~g 286 (854)
+||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|+++.+.+| ++.++|
T Consensus 158 ~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~--~v~~~G 235 (474)
T PF00982_consen 158 MLRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRG--TVEYNG 235 (474)
T ss_dssp HHHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE---EEETT
T ss_pred HHHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCc--eEEECC
Confidence 999999999999999999999999999999999999999999999999999999999999999999888766 699999
Q ss_pred eEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCC-CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEE
Q 003042 287 RTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDG-KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLV 365 (854)
Q Consensus 287 r~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLv 365 (854)
|.++|.++|+|||++.|...+.++++.++.+++++++++ +++|+||||+|++|||.++|+||++||++||+|+|+++|+
T Consensus 236 r~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~li 315 (474)
T PF00982_consen 236 RRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLI 315 (474)
T ss_dssp EEEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEE
T ss_pred EEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEE
Confidence 999999999999999999999999999999999999988 4999999999999999999999999999999999999999
Q ss_pred EEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeee
Q 003042 366 QITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVS 445 (854)
Q Consensus 366 qi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~ 445 (854)
||+.|+|++.++|++++++++++|++||++||+.+|+||+|+.+.++++++.|||++||||++||+|||||||++||++|
T Consensus 316 Qi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~ 395 (474)
T PF00982_consen 316 QIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVAC 395 (474)
T ss_dssp EE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHH
T ss_pred EEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCCCCCceEEEecCccccccCC-CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccc
Q 003042 446 RQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS 524 (854)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 524 (854)
|++ ++|+||+|||+|++++|. +|++|||||++++|+||.+||+||++||+.|+++++++|.+
T Consensus 396 q~~-----------------~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~ 458 (474)
T PF00982_consen 396 QDD-----------------NPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVRE 458 (474)
T ss_dssp S-T-----------------S--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHH
T ss_pred ecC-----------------CCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHh
Confidence 883 479999999999999997 67999999999999999999999999999999999999999
Q ss_pred cChHHHHHHHHHHHHH
Q 003042 525 HDVAYWAKSIDQDLER 540 (854)
Q Consensus 525 ~~~~~W~~~~l~~l~~ 540 (854)
||+.+|+++||++|++
T Consensus 459 ~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 459 HDVQWWAESFLRDLKR 474 (474)
T ss_dssp T-HHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhhC
Confidence 9999999999999974
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-114 Score=957.30 Aligned_cols=467 Identities=39% Similarity=0.661 Sum_probs=433.0
Q ss_pred CCCCCCcEEEEEcCCccceEEeCCCCceEEEecCCchhhhhhccCCCCCCeEEEecCCcccCCcchhhHHHhhhcCeeEE
Q 003042 46 IVEPCQRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCV 125 (854)
Q Consensus 46 ~~~~~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (854)
+.....|+|+||||+|+...+..+++...+..++|||+++|...+ ...+++|+||+|...++.+-.........++...
T Consensus 10 ~~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~~-~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~ 88 (486)
T COG0380 10 SPLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLL-RVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSA 88 (486)
T ss_pred CcccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchhh-HhhcceEEecCceeccccccchhhhhccccceEE
Confidence 456778999999999999876666667888999999999997654 4589999999998764333222333345689999
Q ss_pred EEeCChhhhhhhhcccccccccccccccCCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHH
Q 003042 126 PTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLP 205 (854)
Q Consensus 126 pv~l~~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp 205 (854)
||+++.+++++||+||||++|||+|||+.+. ..|++.+|++|++||++|||+|++.+++ +|+||||||||+|||
T Consensus 89 ~v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~-----~~~~~~~w~~Y~~vN~~FAd~i~~~~~~-gDiIWVhDYhL~L~P 162 (486)
T COG0380 89 PVILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDAYVKVNRKFADKIVEIYEP-GDIIWVHDYHLLLVP 162 (486)
T ss_pred EEecCHHHHHHHHHHhhHhhhcceeeeecCc-----cccchHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEechhhhhH
Confidence 9999999999999999999999999999875 5899999999999999999999999998 499999999999999
Q ss_pred HHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEE--
Q 003042 206 SFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLD-- 283 (854)
Q Consensus 206 ~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~-- 283 (854)
+|||++.|+++||||||||||++|+|+|||+|+||++|||+||+|||||.+|++||+++|+|+++.... ..+.
T Consensus 163 ~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~-----~~~~~~ 237 (486)
T COG0380 163 QMLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGD-----ADIRFN 237 (486)
T ss_pred HHHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccccc-----cccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999986521 1233
Q ss_pred -ECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCC-CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCc
Q 003042 284 -YFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDG-KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGK 361 (854)
Q Consensus 284 -~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~ 361 (854)
++|+.+++..+|+|||+..|.....++.+..++.++++.+.+ +++|++|||+|+.||+..+++||++||++||+|+||
T Consensus 238 ~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~k 317 (486)
T COG0380 238 GADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGK 317 (486)
T ss_pred ccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCc
Confidence 448999999999999999999999999998889999999976 999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCccee
Q 003042 362 VVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYK 441 (854)
Q Consensus 362 vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~E 441 (854)
++|+||+.|+|++.++|+.++.+++++|++||++||+.+|+||+|+++.++++++.+||++||++++||+|||||||++|
T Consensus 318 vvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakE 397 (486)
T COG0380 318 VVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKE 397 (486)
T ss_pred eEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhcc
Q 003042 442 YTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKY 521 (854)
Q Consensus 442 a~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 521 (854)
|+|||. +++|+||+|||+||+.+|.+|++|||||.+++|+||.+||+|+++||+.|++++++.
T Consensus 398 yVa~q~-----------------~~~G~LiLSeFaGaa~~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~ 460 (486)
T COG0380 398 YVAAQR-----------------DKPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQ 460 (486)
T ss_pred HHHhhc-----------------CCCCcEEEeccccchhhhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 999987 347999999999999999999999999999999999999999999999999999999
Q ss_pred ccccChHHHHHHHHHHHHHH
Q 003042 522 ISSHDVAYWAKSIDQDLERA 541 (854)
Q Consensus 522 v~~~~~~~W~~~~l~~l~~~ 541 (854)
|.+||+++|+++|+.+|.++
T Consensus 461 v~~~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 461 VLTHDVARWANSFLDDLAQA 480 (486)
T ss_pred HHhhhHHHHHHHHHHHHHhc
Confidence 99999999999999999873
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-107 Score=931.33 Aligned_cols=454 Identities=39% Similarity=0.687 Sum_probs=423.2
Q ss_pred cEEEEEcCCccceEEeCCCCceEEEecCCchhhhhhccCCCCCCeEEEecCCcccCCc-chhhHHHhhhcCeeEEEEeCC
Q 003042 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVD-DQEEVSTILLEKFKCVPTFLP 130 (854)
Q Consensus 52 ~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~pv~l~ 130 (854)
||||||||+|+.+.++ + +++++|||+++|.+.+. ..+++||||+|...+++ ++..+...+..+|+|+||||+
T Consensus 1 ~livvsnr~p~~~~~~---~---~~~~~gGl~~al~~~~~-~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 73 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG---G---LEPSAGGLAVALLGALK-ATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLS 73 (456)
T ss_pred CEEEEECCCCccccCC---C---CCcCCCCHHHHHHHHHh-ccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECC
Confidence 7999999999988653 1 56788999999988765 46999999999765433 334455556788999999999
Q ss_pred hhhhhhhhcccccccccccccccCCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHh
Q 003042 131 ADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRK 210 (854)
Q Consensus 131 ~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~ 210 (854)
+++++.||+||||++|||+|||+++. .+|+++.|++|++||++||++|++.++| +|+|||||||||+||.+||+
T Consensus 74 ~~~~~~~y~gf~n~~lWPl~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~i~~~~~~-~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 74 EEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDRKAWEAYRRVNRLFAEALAPLLQP-GDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHHHhhhhhcchhhcccccc-----cccCHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEecchhhHHHHHHHh
Confidence 99999999999999999999999654 5899999999999999999999999997 59999999999999999999
Q ss_pred ccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEE
Q 003042 211 RFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVS 290 (854)
Q Consensus 211 ~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~ 290 (854)
+.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||+++|+|++|+++... ++.+.|+.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~----~~~~~g~~~~ 223 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRTVR 223 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCC----ceEECCcEEE
Confidence 999999999999999999999999999999999999999999999999999999999999887543 3678899999
Q ss_pred EEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 003042 291 IKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNP 370 (854)
Q Consensus 291 i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p 370 (854)
|.++|+|||++.|.+....+++.+..+.+|++++++++|++|||+++.||+..+|+||++|++++|+++++++|+|++.|
T Consensus 224 v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p 303 (456)
T TIGR02400 224 VGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVP 303 (456)
T ss_pred EEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecC
Confidence 99999999999999888778888888889999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCC
Q 003042 371 ARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSP 450 (854)
Q Consensus 371 ~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~ 450 (854)
+|+++++|+++++++++++++||++||..+|.|++++.+.++.+|+.++|++|||||+||++||||||++|||||+.
T Consensus 304 ~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~--- 380 (456)
T TIGR02400 304 SRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQD--- 380 (456)
T ss_pred CccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred ccccccCCCCCCCCCCCceEEEecCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHH
Q 003042 451 VLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYW 530 (854)
Q Consensus 451 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W 530 (854)
++.|++|+|+++|+++++.+|++|||+|++++|+||.++|+|+.+||+.|+++++++|.+||+.+|
T Consensus 381 --------------P~~g~vVlS~~~G~~~~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W 446 (456)
T TIGR02400 381 --------------PKDGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRW 446 (456)
T ss_pred --------------CCCceEEEeCCCCChHHhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHH
Confidence 235899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 003042 531 AKSIDQDLE 539 (854)
Q Consensus 531 ~~~~l~~l~ 539 (854)
+++|+.+|.
T Consensus 447 ~~~~l~~l~ 455 (456)
T TIGR02400 447 REDFLSDLN 455 (456)
T ss_pred HHHHHHHhh
Confidence 999999874
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-98 Score=859.54 Aligned_cols=459 Identities=42% Similarity=0.762 Sum_probs=427.8
Q ss_pred cEEEEEcCCccceEEeCCCCceEEEecCCchhhhhhccCCCCCCeEEEecCCcccCCcchhhHHHhhhcCeeEEEEeCCh
Q 003042 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFLPA 131 (854)
Q Consensus 52 ~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~ 131 (854)
|+||||||+|+.++++++ |.|+++++.|||+++|.+.+. ..+++||||++...+.++.+.+.....++|+|+|||+++
T Consensus 1 ~li~vsnr~p~~~~~~~~-~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 78 (460)
T cd03788 1 RLVVVSNRLPVSIERDGD-GEFEARRSAGGLATALKGLLK-RTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSP 78 (460)
T ss_pred CEEEEECCCCceeEEcCC-CceEeccCCCcHHHHHHHHHh-cCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCH
Confidence 689999999999998765 589999999999999987554 579999999998766544444555667899999999999
Q ss_pred hhhhhhhcccccccccccccccCCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhc
Q 003042 132 DVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKR 211 (854)
Q Consensus 132 ~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~ 211 (854)
++++.||+||||++|||+|||+.+. .+|++++|++|++||++||++|++.++| +|+||||||||+++|.+||++
T Consensus 79 ~~~~~~y~~f~~~~LWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 79 EEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEAYVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHHHhhhhhcchhhcCCCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeChhhhHHHHHHHhh
Confidence 9999999999999999999999876 5899999999999999999999999997 599999999999999999999
Q ss_pred cCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEE
Q 003042 212 FHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSI 291 (854)
Q Consensus 212 ~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i 291 (854)
.|+++||||||||||++|+|+++|+|++|+++||+||+|||||++|++||+++|+++++++..... .+.++|+.++|
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~---~i~~~g~~~~i 229 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDG---GVEYGGRRVRV 229 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCc---eEEECCEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999998866532 68899999999
Q ss_pred EEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCC
Q 003042 292 KILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPA 371 (854)
Q Consensus 292 ~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~ 371 (854)
.++|+|||++.|......+...++..++++.++++++|++|||+++.||+..+|+||++|++++|+++++++|+|+|.|+
T Consensus 230 ~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~ 309 (460)
T cd03788 230 GAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPS 309 (460)
T ss_pred EEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCC
Confidence 99999999999998777676666666777778899999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCc
Q 003042 372 RSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPV 451 (854)
Q Consensus 372 r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~ 451 (854)
++++++++++++++++++++||.+||..+|.|++++.+.++.+++.++|++|||||+||++||||||++|||||+.
T Consensus 310 ~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~---- 385 (460)
T cd03788 310 RTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQD---- 385 (460)
T ss_pred CcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEec----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cccccCCCCCCCCCCCceEEEecCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHH
Q 003042 452 LDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWA 531 (854)
Q Consensus 452 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~ 531 (854)
+++|++|+|+++|+++++.+|++|||+|++++|++|.++|+|++++++.+++++++++.++|+..|+
T Consensus 386 -------------p~~g~vV~S~~~G~~~~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~ 452 (460)
T cd03788 386 -------------DDPGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWA 452 (460)
T ss_pred -------------CCCceEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 2468999999999999988899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 003042 532 KSIDQDL 538 (854)
Q Consensus 532 ~~~l~~l 538 (854)
++|+++|
T Consensus 453 ~~~l~~l 459 (460)
T cd03788 453 NSFLDDL 459 (460)
T ss_pred HHHHHhh
Confidence 9999987
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=339.56 Aligned_cols=544 Identities=14% Similarity=0.103 Sum_probs=320.6
Q ss_pred CeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhh-----------------cCCChHHH-HHHhhcCCeEeec
Q 003042 192 DYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYR-----------------TLPVRDEI-LKSLLNSDLIGFH 253 (854)
Q Consensus 192 D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~-----------------~lp~r~ei-l~~ll~~dligf~ 253 (854)
|+|+-|+.+--.+...|++++ ++|..++.|.- ..+-++ .++.|-+. -..+-.||.|--.
T Consensus 312 DvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIas 388 (1050)
T TIGR02468 312 YVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITS 388 (1050)
T ss_pred CEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEe
Confidence 899999877777777777765 68999999963 111111 11222221 1245678999888
Q ss_pred CHHHHHHHHHHHH-------hhhCccccccCceeeEEECCe-EEEEEEeccccCchHHHhhhCCchH-------------
Q 003042 254 TFDYARHFLSSCS-------RMLGLNYESKRGYIGLDYFGR-TVSIKILPVGIHMGQFESIMSLDVT------------- 312 (854)
Q Consensus 254 t~~~~~~Fl~~~~-------r~lg~~~~~~~~~~~i~~~gr-~~~i~v~p~GId~~~~~~~~~~~~~------------- 312 (854)
|......-...-. |.|-.. ..+ ++..+|+ .-++.|+|+|||+++|.+.....+.
T Consensus 389 T~qE~~eq~~lY~~~~~~~~~~~~~~--~~~---gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~ 463 (1050)
T TIGR02468 389 TRQEIEEQWGLYDGFDVILERKLRAR--ARR---GVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPD 463 (1050)
T ss_pred CHHHHHHHHHHhccCCchhhhhhhhh--hcc---cccccccCCCCeEEeCCCCcHHHccCCCccccchhccccccccccc
Confidence 8776654322110 111000 111 2333333 2388999999999999863211110
Q ss_pred HHHHHHHHHHc--CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHH----HHHHHHHH
Q 003042 313 GQKVKELKEKF--DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDV----QDLLSDTN 386 (854)
Q Consensus 313 ~~~~~~l~~~~--~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~----~~l~~~v~ 386 (854)
.....+++..+ +++++||+|||+++.||+..+|+||..+.+..+.. ++++ ++|... +.... ..+..++.
T Consensus 464 ~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~ 538 (1050)
T TIGR02468 464 PPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVL 538 (1050)
T ss_pred chhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHH
Confidence 00112333333 57889999999999999999999999986543321 3433 345311 11111 12334455
Q ss_pred HHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhC----cEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCC
Q 003042 387 RIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIA----ECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKN 462 (854)
Q Consensus 387 ~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~A----Dv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~ 462 (854)
.++.+ .+....+.|.+.++.+++.++|+.| ||||+||.+||||++++|||||
T Consensus 539 ~li~~-------lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAc----------------- 594 (1050)
T TIGR02468 539 KLIDK-------YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH----------------- 594 (1050)
T ss_pred HHHHH-------hCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHh-----------------
Confidence 55555 3344566778889999999999988 6999999999999999999999
Q ss_pred CCCCCceEEEecCccccccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHH
Q 003042 463 PPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (854)
Q Consensus 463 ~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 539 (854)
|.|+|+|..+|+.+.+. +|++|+|.|++++|++|.++|+.++ .++...+..++.+.++++...++++++.+.
T Consensus 595 ----GlPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dpe-lr~~m~~~gr~~v~~FSWe~ia~~yl~~i~ 669 (1050)
T TIGR02468 595 ----GLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQ-LWAECRQNGLKNIHLFSWPEHCKTYLSRIA 669 (1050)
T ss_pred ----CCCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCHH-HHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 45999999999888873 4999999999999999999998664 444455556677788999999999998888
Q ss_pred HHHHhcccccccc-----------cC--------CCcceeEeecCc--cc-----cccCH----HHHHHH----------
Q 003042 540 RACRDHLFKRCWG-----------VG--------LGLGFRIVALGP--EF-----RKLGM----HHIASA---------- 579 (854)
Q Consensus 540 ~~~~~~~~~~~~~-----------~g--------~~~~~~~~~~~~--~f-----~~l~~----~~i~~~---------- 579 (854)
.....+..-.... .+ .+|++.+-.-.+ +. ..++. ..+.++
T Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (1050)
T TIGR02468 670 SCRPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKG 749 (1050)
T ss_pred HHhccCcccccccccccccccccCccccccccccchhhccccccccccccccccccccchhhHHHHHHHHHhhccccccc
Confidence 7655441110000 01 011111100000 00 00000 011111
Q ss_pred -------------Hh--hcCCeEEE--EecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcC
Q 003042 580 -------------YN--KTNSRLIL--LDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (854)
Q Consensus 580 -------------y~--~~~~klI~--~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 642 (854)
|. ....++|+ +|+|+| .. ....-..+.++++.-.....+.++++|||+...+..++..
T Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~-~~----~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~ 824 (1050)
T TIGR02468 750 SSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDD-KD----LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKS 824 (1050)
T ss_pred cccccccccccccCccccccceEEEEEeccCCC-CC----hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHh
Confidence 11 11246666 899999 33 1112223333333211234578999999999999998754
Q ss_pred --Cc---ccceeecCcEEEEECCC-----cceEEcc---ccccchHH-HHHHHHHHHHhcc--------CCcceEecccc
Q 003042 643 --VE---KLGLSAEHGYFTRWSKN-----SAWEICS---LTRDFDWK-EIAEPVMKLYTET--------TDGSFIEDKET 700 (854)
Q Consensus 643 --~~---~l~liaenG~~I~~~~~-----~~~~~~~---~~~~~~~~-~~v~~~~~~y~~~--------~~g~~ie~k~~ 700 (854)
+| .-.+||.-|..|+++.. ..|..-. ...+..|. +.++..+..+... .++...+..+.
T Consensus 825 ~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~ 904 (1050)
T TIGR02468 825 GGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEES 904 (1050)
T ss_pred CCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChhh
Confidence 33 22368888988888621 1222100 01122342 2233333333221 12222222221
Q ss_pred --eEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEE-Ee
Q 003042 701 --AIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLC-IG 777 (854)
Q Consensus 701 --~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vla-iG 777 (854)
.....|.-.++... ...+++.+.|+..--...+....+..+++|.|..+|||.|+++|+.++ |++.+++++ +|
T Consensus 905 q~~~k~SY~v~d~~~~-~~v~elr~~Lr~~gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rw---gi~l~~v~VfaG 980 (1050)
T TIGR02468 905 STDHCYAFKVKDPSKV-PPVKELRKLLRIQGLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRW---GIELANMAVFVG 980 (1050)
T ss_pred CCCceEEEEecCcccC-ccHHHHHHHHHhCCCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHc---CCChHHeEEEec
Confidence 22333321222211 123444444442211111222334589999999999999999999999 999999955 99
Q ss_pred CCcc-cHHHH
Q 003042 778 DDRS-DEDMF 786 (854)
Q Consensus 778 Ds~N-D~~Mf 786 (854)
|+.| |+++|
T Consensus 981 dSGntD~e~L 990 (1050)
T TIGR02468 981 ESGDTDYEGL 990 (1050)
T ss_pred cCCCCCHHHH
Confidence 9999 95544
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-31 Score=274.86 Aligned_cols=249 Identities=32% Similarity=0.499 Sum_probs=213.4
Q ss_pred CHHHHHHHHhhcCCeEEEEecCCCCCCCC--CCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCccccee
Q 003042 572 GMHHIASAYNKTNSRLILLDYDGTVMPQT--SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLS 649 (854)
Q Consensus 572 ~~~~i~~~y~~~~~klI~~DlDGTLl~~~--~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~li 649 (854)
....+.+.|...++++|++||||||++.. +....++++++++|++|+.+.++.|+|+|||+..+++.+++ +++++++
T Consensus 5 ~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~-v~~i~l~ 83 (266)
T COG1877 5 QSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG-VPGIGLI 83 (266)
T ss_pred hhhhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC-CCCccEE
Confidence 34566778899999999999999999854 24556889999999999999999999999999999999997 8899999
Q ss_pred ecCcEEEEECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHh
Q 003042 650 AEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVL 729 (854)
Q Consensus 650 aenG~~I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l 729 (854)
|+||++++.+.+..|..........|++.+..++++|.+++||+++|.|+..+.|||+++.++....++...... .
T Consensus 84 aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~----~ 159 (266)
T COG1877 84 AEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAAT----L 159 (266)
T ss_pred EecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHh----c
Confidence 999999998888888877777777899999999999999999999999999999999999776543322222211 1
Q ss_pred cCCC-EEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEE
Q 003042 730 ANEP-VVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACT 808 (854)
Q Consensus 730 ~~~~-~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~ 808 (854)
.+.. +.++.|+..||++|.++|||.+++++++.. +...++++|.||+..|+.||++++.. +.++|.
T Consensus 160 ~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~---~~~~~~~~~aGDD~TDE~~F~~v~~~----------~~~~v~ 226 (266)
T COG1877 160 INELKLRVTPGKMVVELRPPGVSKGAAIKYIMDEL---PFDGRFPIFAGDDLTDEDAFAAVNKL----------DSITVK 226 (266)
T ss_pred cccccEEEEeCceEEEEeeCCcchHHHHHHHHhcC---CCCCCcceecCCCCccHHHHHhhccC----------CCceEE
Confidence 2222 889999999999999999999999999987 55556899999999999999999874 237899
Q ss_pred ecCCCcccceEeCCHhHHHHHHHHHHhccC
Q 003042 809 VGQKPSMAKYYLDDTAEVINLLEGLATESV 838 (854)
Q Consensus 809 vG~~~s~A~y~l~~~~eV~~~L~~l~~~~~ 838 (854)
+|...+.|++.+.........+.++.....
T Consensus 227 v~~~~t~a~~~~~~~~~~~~~l~~~~~~~~ 256 (266)
T COG1877 227 VGVGSTQAKFRLAGVYGFLRSLYKLLEALG 256 (266)
T ss_pred ecCCcccccccccccHHHHHHHHHHHHHhh
Confidence 999999999999999999999988887654
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=274.62 Aligned_cols=237 Identities=30% Similarity=0.447 Sum_probs=194.4
Q ss_pred cCCeEEEEecCCCCCCCC--CCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECC
Q 003042 583 TNSRLILLDYDGTVMPQT--SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSK 660 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~--~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~ 660 (854)
++.++|+|||||||++.. +....+++++.++|++|++++++.|+|+|||+..++...+ .+++++++++||++++.++
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~-~~~~~~l~g~hG~~~~~~g 79 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGV-KLPGLGLAGEHGCEMKDNG 79 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccC-CCCceeEEeecCEEEecCC
Confidence 467999999999999843 2345678999999999999999999999999988887665 3478999999999998744
Q ss_pred Cc-ceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccC-CCccchhhHHHHHHHHHHHhcCCCEEEEE
Q 003042 661 NS-AWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHA-DPHFGSCQAKELLDHLENVLANEPVVVKR 738 (854)
Q Consensus 661 ~~-~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~-d~~~~~~~~~el~~~l~~~l~~~~~~v~~ 738 (854)
.. .|... ......|++.+.++.+++.++ +|+++|.|+.++.|||+.+ +++.+..++.++..++. ...++.+..
T Consensus 80 ~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~---~~~~~~v~~ 154 (244)
T TIGR00685 80 SCQDWVNL-TEKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKIL---SFTDLEVMD 154 (244)
T ss_pred Ccceeeec-hhhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHh---cCCCEEEEE
Confidence 33 35432 222246888888999988887 9999999999999999998 77776666666665543 334678899
Q ss_pred cCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEe--cCCCccc
Q 003042 739 GQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTV--GQKPSMA 816 (854)
Q Consensus 739 g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~v--G~~~s~A 816 (854)
++.++|++|.++|||.+++.+++.+ ++.++++++|||+.||++||+.+.... .....++|.| |..++.|
T Consensus 155 g~~~~e~~p~~~~Kg~a~~~~~~~~---~~~~~~~i~iGD~~~D~~~~~~~~~~~------~~~g~~~v~v~~g~~~~~A 225 (244)
T TIGR00685 155 GKAVVELKPRFVNKGEIVKRLLWHQ---PGSGISPVYLGDDITDEDAFRVVNNQW------GNYGFYPVPIGSGSKKTVA 225 (244)
T ss_pred CCeEEEEeeCCCCHHHHHHHHHHhc---ccCCCceEEEcCCCcHHHHHHHHhccc------CCCCeEEEEEecCCcCCCc
Confidence 9999999999999999999999998 888899999999999999999993210 0112467777 8888999
Q ss_pred ceEeCCHhHHHHHHHHHH
Q 003042 817 KYYLDDTAEVINLLEGLA 834 (854)
Q Consensus 817 ~y~l~~~~eV~~~L~~l~ 834 (854)
+|+++++++|.++|+.|+
T Consensus 226 ~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 226 KFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred eEeCCCHHHHHHHHHHHh
Confidence 999999999999999886
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-30 Score=274.92 Aligned_cols=231 Identities=20% Similarity=0.251 Sum_probs=184.4
Q ss_pred CeEEEEecCCCCCCCC--CCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCc
Q 003042 585 SRLILLDYDGTVMPQT--SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNS 662 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~--~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~ 662 (854)
.++|++||||||++.. +....++++++++|++|++++|+.|+|+|||+...+.++++.+ .+.++++||++++..++.
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~ 92 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY-RFPLAGVHGAERRDINGK 92 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc-cceEEEeCCCeeecCCCC
Confidence 5899999999999832 1356889999999999955589999999999999999999654 467899999999876544
Q ss_pred ceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhc-CC-CEEEEEcC
Q 003042 663 AWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLA-NE-PVVVKRGQ 740 (854)
Q Consensus 663 ~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~-~~-~~~v~~g~ 740 (854)
.+... ...++.+.+...++.+.++++|+++|.++..+.+||+.++.+ .+.+..+.+.+. .. ...+.+++
T Consensus 93 ~~~~~---l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~------~~~~~~l~~~i~~~~~~~~~~~g~ 163 (266)
T PRK10187 93 THIVH---LPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQH------EDALLALAQRITQIWPQLALQPGK 163 (266)
T ss_pred eeecc---CChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCcc------HHHHHHHHHHHHhhCCceEEeCCC
Confidence 33222 233444444455556678889999999999999999877321 222333332222 22 36677899
Q ss_pred eEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCCcccceEe
Q 003042 741 HIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYL 820 (854)
Q Consensus 741 ~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~s~A~y~l 820 (854)
.++||+|+++|||.|++++++++ |+..+++++|||+.||++||+.+... ..++|+||++.+.|+|++
T Consensus 164 ~~lEi~p~g~~Kg~al~~ll~~~---~~~~~~v~~~GD~~nD~~mf~~~~~~----------~g~~vavg~a~~~A~~~l 230 (266)
T PRK10187 164 CVVEIKPRGTNKGEAIAAFMQEA---PFAGRTPVFVGDDLTDEAGFAVVNRL----------GGISVKVGTGATQASWRL 230 (266)
T ss_pred EEEEeeCCCCCHHHHHHHHHHhc---CCCCCeEEEEcCCccHHHHHHHHHhc----------CCeEEEECCCCCcCeEeC
Confidence 99999999999999999999999 99999999999999999999999432 127899999999999999
Q ss_pred CCHhHHHHHHHHHHhccC
Q 003042 821 DDTAEVINLLEGLATESV 838 (854)
Q Consensus 821 ~~~~eV~~~L~~l~~~~~ 838 (854)
+++++|..+|+.|++..+
T Consensus 231 ~~~~~v~~~L~~l~~~~~ 248 (266)
T PRK10187 231 AGVPDVWSWLEMITTAQQ 248 (266)
T ss_pred CCHHHHHHHHHHHHHhhh
Confidence 999999999999997665
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-31 Score=278.15 Aligned_cols=227 Identities=41% Similarity=0.742 Sum_probs=154.2
Q ss_pred EEecCCCCCCCCC--CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceEE
Q 003042 589 LLDYDGTVMPQTS--EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEI 666 (854)
Q Consensus 589 ~~DlDGTLl~~~~--~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~~ 666 (854)
|+||||||.+..+ ....+++++.++|++||+++++.|+|+|||+...+.. +..+++++++++||++++.+++..|..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~-~~~~~~i~l~gehG~e~~~~~~~~~~~ 79 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLER-FGGIPNIGLAGEHGAEIRRPGGSEWTN 79 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHH-H-S-SS-EEEEGGGTEEEETTE-EEE-
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHH-hcCCCCceEEEEeeEEeccCccccccc
Confidence 6999999999543 3456889999999999999999999999999999444 446789999999999999999888887
Q ss_pred ccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCC-CEEEEEcCeEEEE
Q 003042 667 CSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANE-PVVVKRGQHIVEV 745 (854)
Q Consensus 667 ~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~-~~~v~~g~~~vEI 745 (854)
........|++.+.++++.|.++++|+++|.|++++.|||++++++++..++.++.+++.+.+... .+.+..|+..+||
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEv 159 (235)
T PF02358_consen 80 LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEV 159 (235)
T ss_dssp TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEE
T ss_pred cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEE
Confidence 555666689999999999999999999999999999999999999998889999999998877765 7899999999999
Q ss_pred eeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecC-----CCcccceEe
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ-----KPSMAKYYL 820 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~-----~~s~A~y~l 820 (854)
+|.+++||.|+++|++.+...+..+++++|+||+.+|++||++++... ..-+++.||. +++.|+|++
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~--------~~~~~i~V~~~~~~~~~t~A~y~l 231 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELE--------EGGFGIKVGSVSVGEKPTAASYRL 231 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS------------EEEEES---------------
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcc--------cCCCCeEEEeeccccccccccccc
Confidence 999999999999999987222233789999999999999999987631 1125666664 579999999
Q ss_pred CCHh
Q 003042 821 DDTA 824 (854)
Q Consensus 821 ~~~~ 824 (854)
+||.
T Consensus 232 ~~p~ 235 (235)
T PF02358_consen 232 DDPS 235 (235)
T ss_dssp ----
T ss_pred ccCC
Confidence 9873
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=274.08 Aligned_cols=245 Identities=26% Similarity=0.371 Sum_probs=193.8
Q ss_pred HHHHHHHhhcCCeEEEEecCCCCCCCCC-CCC-CCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeec
Q 003042 574 HHIASAYNKTNSRLILLDYDGTVMPQTS-EDK-RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAE 651 (854)
Q Consensus 574 ~~i~~~y~~~~~klI~~DlDGTLl~~~~-~~~-~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liae 651 (854)
+.++. +.+.+..+||+||||||++... .++ .+++++.++|++|+ +++.|+|+|||++..+..+++ +.+++++++
T Consensus 101 ~~~~~-~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La--~~~~vaIvSGR~~~~l~~~~~-l~~l~l~g~ 176 (366)
T PLN03017 101 EQIME-ASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA--KCFPTAIVTGRCIDKVYNFVK-LAELYYAGS 176 (366)
T ss_pred HHHHH-HhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh--cCCcEEEEeCCCHHHHHHhhc-ccCceEEEc
Confidence 33443 3455789999999999996443 233 79999999999994 678999999999999999864 457889999
Q ss_pred CcEEEEECCCcceEE------ccccccchHHHHHHHH---HHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHH
Q 003042 652 HGYFTRWSKNSAWEI------CSLTRDFDWKEIAEPV---MKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELL 722 (854)
Q Consensus 652 nG~~I~~~~~~~~~~------~~~~~~~~~~~~v~~~---~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~ 722 (854)
||+.++.+++..+.. ........|...+.++ +..++++++|+++|.|.+++.|||+++++.. ..++.
T Consensus 177 hGa~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~----~~~l~ 252 (366)
T PLN03017 177 HGMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKK----WSELV 252 (366)
T ss_pred CCcEEecCCCcceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHH----HHHHH
Confidence 999998765422111 1111223466666655 5567888999999999999999999997642 35666
Q ss_pred HHHHHHhcCCC-EEEEEcCeEEEEeeC-CcchHHHHHHHHHHHhhCCCC---CCeEEEEeCCcccHHHHHHhhhhcCCCC
Q 003042 723 DHLENVLANEP-VVVKRGQHIVEVKPQ-GVSKGIVVKNLISTMRSRGKS---PDFVLCIGDDRSDEDMFESIEQAVADPS 797 (854)
Q Consensus 723 ~~l~~~l~~~~-~~v~~g~~~vEI~p~-gvsKg~al~~ll~~l~~~gi~---~d~vlaiGDs~ND~~Mf~~ag~~~~~~~ 797 (854)
.++...+.+.+ +.+..|+..+||+|. ++|||.|+++|++.+ |.. .++++|||||.+||+||+.+....
T Consensus 253 ~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l---~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~---- 325 (366)
T PLN03017 253 LQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESL---GFGNTNNVFPVYIGDDRTDEDAFKMLRDRG---- 325 (366)
T ss_pred HHHHHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhc---ccccCCCceEEEeCCCCccHHHHHHHhhcC----
Confidence 77777776665 789999999999996 999999999999988 543 568999999999999999996421
Q ss_pred CCCCccEEEEEec--CCCcccceEeCCHhHHHHHHHHHHhccC
Q 003042 798 VPGIAEVFACTVG--QKPSMAKYYLDDTAEVINLLEGLATESV 838 (854)
Q Consensus 798 ~~~~~~~~aV~vG--~~~s~A~y~l~~~~eV~~~L~~l~~~~~ 838 (854)
..++|.|| .+++.|+|+|+++++|..+|+.|+.-..
T Consensus 326 -----~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~~ 363 (366)
T PLN03017 326 -----EGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEWKQ 363 (366)
T ss_pred -----CceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHHh
Confidence 13899999 5789999999999999999999987543
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-29 Score=270.24 Aligned_cols=242 Identities=23% Similarity=0.376 Sum_probs=191.5
Q ss_pred hhcCCeEEEEecCCCCCCCCC--CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEE
Q 003042 581 NKTNSRLILLDYDGTVMPQTS--EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRW 658 (854)
Q Consensus 581 ~~~~~klI~~DlDGTLl~~~~--~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~ 658 (854)
.+.+..+||+||||||++... ....++++++++|++|+ ++..|+|+|||+...+..+++ +++++++++||++++.
T Consensus 94 ~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La--~~~~vaIvSGR~~~~l~~~~~-~~~l~laGsHG~e~~~ 170 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA--KCFPTAIVSGRCREKVSSFVK-LTELYYAGSHGMDIKG 170 (354)
T ss_pred hcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh--cCCCEEEEECCCHHHHHHHcC-CccceEEEeCCceeec
Confidence 456789999999999997542 34478999999999996 457999999999999999996 5689999999999987
Q ss_pred CC-CcceEEc----cccccchHHHHHHHHHHHH---hccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhc
Q 003042 659 SK-NSAWEIC----SLTRDFDWKEIAEPVMKLY---TETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLA 730 (854)
Q Consensus 659 ~~-~~~~~~~----~~~~~~~~~~~v~~~~~~y---~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~ 730 (854)
++ +..|+.. ......+|...+.++++.+ +.+++|+++|.|.+++.|||++++++ ..+++..++.+.+.
T Consensus 171 p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~----~~~~l~~~l~~v~~ 246 (354)
T PLN02151 171 PEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEEN----KWSDLANQVRSVLK 246 (354)
T ss_pred CCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChH----HHHHHHHHHHHHHh
Confidence 63 3455421 1122346777777665554 57899999999999999999999765 23456677777776
Q ss_pred CCC-EEEEEcCeEEEEeeC-CcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEE
Q 003042 731 NEP-VVVKRGQHIVEVKPQ-GVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACT 808 (854)
Q Consensus 731 ~~~-~~v~~g~~~vEI~p~-gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~ 808 (854)
+.+ +.+..|+..+||+|. ++|||.|+++|++.+.-.+...++++|||||.+||+||+.+..... -+++.
T Consensus 247 ~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~---------G~gI~ 317 (354)
T PLN02151 247 NYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQ---------GLGIL 317 (354)
T ss_pred hCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCC---------CccEE
Confidence 655 789999999999996 9999999999999871112234679999999999999999864211 15677
Q ss_pred ec--CCCcccceEeCCHhHHHHHHHHHHhccC
Q 003042 809 VG--QKPSMAKYYLDDTAEVINLLEGLATESV 838 (854)
Q Consensus 809 vG--~~~s~A~y~l~~~~eV~~~L~~l~~~~~ 838 (854)
|| .+++.|+|+|+++++|..+|+.|+.-..
T Consensus 318 Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~~~ 349 (354)
T PLN02151 318 VSKYAKETNASYSLQEPDEVMEFLERLVEWKQ 349 (354)
T ss_pred eccCCCCCcceEeCCCHHHHHHHHHHHHHhhh
Confidence 76 6789999999999999999999987443
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-29 Score=274.53 Aligned_cols=241 Identities=25% Similarity=0.376 Sum_probs=186.3
Q ss_pred HHHhhcCCeEEEEecCCCCCCCC--CCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEE
Q 003042 578 SAYNKTNSRLILLDYDGTVMPQT--SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYF 655 (854)
Q Consensus 578 ~~y~~~~~klI~~DlDGTLl~~~--~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~ 655 (854)
.+|.+.+.+++|+||||||.+.. +....++++++++|++|+++ ..|+|+|||+...+.++++ ++.++++++||++
T Consensus 112 ~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~-~~~l~laGsHG~e 188 (384)
T PLN02580 112 ANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVG-LTELYYAGSHGMD 188 (384)
T ss_pred HHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhC-CCCccEEEeCCce
Confidence 37889999999999999999854 24556899999999999654 4799999999999999996 4579999999999
Q ss_pred EEECCC----cceEEcc------------ccccchHHHHHHHHHHH---HhccCCcceEecccceEEEeeccCCCccchh
Q 003042 656 TRWSKN----SAWEICS------------LTRDFDWKEIAEPVMKL---YTETTDGSFIEDKETAIVWHHQHADPHFGSC 716 (854)
Q Consensus 656 I~~~~~----~~~~~~~------------~~~~~~~~~~v~~~~~~---y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~ 716 (854)
++.+.+ ..|...+ .....+|...+.++.+. ++++++|+++|.|.+++.||||++++++...
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~~ 268 (384)
T PLN02580 189 IMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPL 268 (384)
T ss_pred eecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHHH
Confidence 986422 1222111 01123566555555544 5677899999999999999999997765443
Q ss_pred hHHHHHHHHHHHhcCCC-EEEEEcCeEEEEee-CCcchHHHHHHHHHHHhhCCCCCC-e--EEEEeCCcccHHHHHHhhh
Q 003042 717 QAKELLDHLENVLANEP-VVVKRGQHIVEVKP-QGVSKGIVVKNLISTMRSRGKSPD-F--VLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 717 ~~~el~~~l~~~l~~~~-~~v~~g~~~vEI~p-~gvsKg~al~~ll~~l~~~gi~~d-~--vlaiGDs~ND~~Mf~~ag~ 791 (854)
+.. .+.+.+.+.+ +.+..|+.++||+| .++|||.|++++++++ |+..+ + ++||||+.||++||+.+..
T Consensus 269 ~~~----~l~~~l~~~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~---g~~~~d~~~pi~iGDD~TDedmF~~L~~ 341 (384)
T PLN02580 269 VAQ----CVHDVLKKYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESL---GLSNCDDVLPIYIGDDRTDEDAFKVLRE 341 (384)
T ss_pred HHH----HHHHHHHhCCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhc---CCCcccceeEEEECCCchHHHHHHhhhc
Confidence 333 3333444444 78889999999999 5999999999999998 87654 3 4999999999999998754
Q ss_pred hcCCCCCCCCccEEEEEec--CCCcccceEeCCHhHHHHHHHHHHhcc
Q 003042 792 AVADPSVPGIAEVFACTVG--QKPSMAKYYLDDTAEVINLLEGLATES 837 (854)
Q Consensus 792 ~~~~~~~~~~~~~~aV~vG--~~~s~A~y~l~~~~eV~~~L~~l~~~~ 837 (854)
... .++|.|| .+.+.|+|+|+++++|..+|+.|+.-.
T Consensus 342 ~~~---------G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~ 380 (384)
T PLN02580 342 GNR---------GYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWK 380 (384)
T ss_pred cCC---------ceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhh
Confidence 211 1566666 468999999999999999999998644
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-25 Score=239.48 Aligned_cols=226 Identities=22% Similarity=0.302 Sum_probs=157.4
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcc-cceeecCcEEEEECCC
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEK-LGLSAEHGYFTRWSKN 661 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~-l~liaenG~~I~~~~~ 661 (854)
|++|+|++|+||||++ +++.++++++++|+++ +++|+.|+|+|||+...+.+++..+.. .+++++||++|.+.++
T Consensus 1 ~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~~-~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~ 76 (264)
T COG0561 1 MMIKLLAFDLDGTLLD---SNKTISPETKEALARL-REKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGE 76 (264)
T ss_pred CCeeEEEEcCCCCccC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCc
Confidence 5789999999999999 7888999999999999 999999999999999999999977643 3689999999999955
Q ss_pred cceEEccccccchHHHHHHHHHHHHhcc--C-------CcceEeccc-----ceEEE-----eeccC---CC--ccc---
Q 003042 662 SAWEICSLTRDFDWKEIAEPVMKLYTET--T-------DGSFIEDKE-----TAIVW-----HHQHA---DP--HFG--- 714 (854)
Q Consensus 662 ~~~~~~~~~~~~~~~~~v~~~~~~y~~~--~-------~g~~ie~k~-----~~l~~-----~~~~~---d~--~~~--- 714 (854)
..+...++. +.+..+.+...+. . .+.+..... ..... ..... +. .+.
T Consensus 77 ~i~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (264)
T COG0561 77 LLFQKPLSR------EDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDK 150 (264)
T ss_pred EEeeecCCH------HHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEec
Confidence 555444332 2223332222111 0 111100000 00000 00000 00 000
Q ss_pred -hhhHHHHHHHHHHHhcCCCEEEEEcCe-EEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 715 -SCQAKELLDHLENVLANEPVVVKRGQH-IVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 715 -~~~~~el~~~l~~~l~~~~~~v~~g~~-~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
.....++...+.+.+......+.++.. .+||+|+|+|||.|++++++++ |++++++++|||+.||++||+.+|.
T Consensus 151 ~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~l---gi~~~~v~afGD~~ND~~Ml~~ag~- 226 (264)
T COG0561 151 DHEILEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLL---GIKLEEVIAFGDSTNDIEMLEVAGL- 226 (264)
T ss_pred ChHhHHHHHHHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHh---CCCHHHeEEeCCccccHHHHHhcCe-
Confidence 112334444455555544455555544 4999999999999999999999 9999999999999999999999985
Q ss_pred cCCCCCCCCccEEEEEecCC----CcccceEeC--CHhHHHHHHHHHHh
Q 003042 793 VADPSVPGIAEVFACTVGQK----PSMAKYYLD--DTAEVINLLEGLAT 835 (854)
Q Consensus 793 ~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~--~~~eV~~~L~~l~~ 835 (854)
+|+||++ +..|++++. +.++|...|+++..
T Consensus 227 -------------gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 227 -------------GVAMGNADEELKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred -------------eeeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence 6888876 467887654 57889999988754
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.5e-26 Score=243.67 Aligned_cols=231 Identities=18% Similarity=0.265 Sum_probs=154.6
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcc----cceeecCcEEEEE
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEK----LGLSAEHGYFTRW 658 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~----l~liaenG~~I~~ 658 (854)
|++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||+...+..++..+.- .++++.||+.|..
T Consensus 1 m~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~ 76 (270)
T PRK10513 1 MAIKLIAIDMDGTLLL---PDHTISPAVKQAIAAA-RAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQK 76 (270)
T ss_pred CceEEEEEecCCcCcC---CCCccCHHHHHHHHHH-HHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEE
Confidence 4689999999999999 7889999999999999 899999999999999999988866531 2479999999986
Q ss_pred C--CCcceEEccccccch-HHHHHHHH-HHHHhccCCcceEecccce-----------EEEeec---cCCCc--c-----
Q 003042 659 S--KNSAWEICSLTRDFD-WKEIAEPV-MKLYTETTDGSFIEDKETA-----------IVWHHQ---HADPH--F----- 713 (854)
Q Consensus 659 ~--~~~~~~~~~~~~~~~-~~~~v~~~-~~~y~~~~~g~~ie~k~~~-----------l~~~~~---~~d~~--~----- 713 (854)
. +...+...++..... +.+.+++. +..+.....+.+....... ....+. ..++. +
T Consensus 77 ~~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 156 (270)
T PRK10513 77 AADGETVAQTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMM 156 (270)
T ss_pred CCCCCEEEecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEE
Confidence 3 334454444332221 11111110 0000001112222111100 000000 00000 0
Q ss_pred -c-hhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 714 -G-SCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 714 -~-~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
. .....++.+.+.+.+......+.++..++||+|+|+|||.|++++++++ |++++++++|||+.||++||+.+|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml~~ag~ 233 (270)
T PRK10513 157 IDEPEILDAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHL---GIKPEEVMAIGDQENDIAMIEYAGV 233 (270)
T ss_pred eCCHHHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHHhCCc
Confidence 0 0112233333433333333445677789999999999999999999999 9999999999999999999999996
Q ss_pred hcCCCCCCCCccEEEEEecCC----CcccceEeC--CHhHHHHHHHHHH
Q 003042 792 AVADPSVPGIAEVFACTVGQK----PSMAKYYLD--DTAEVINLLEGLA 834 (854)
Q Consensus 792 ~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~--~~~eV~~~L~~l~ 834 (854)
+|+||++ +..|+|++. +.++|.++|+++.
T Consensus 234 --------------~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 234 --------------GVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred --------------eEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 6777775 578999885 4678999998874
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.1e-25 Score=237.50 Aligned_cols=229 Identities=17% Similarity=0.187 Sum_probs=153.1
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEE-CCC
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRW-SKN 661 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~-~~~ 661 (854)
++|+|++||||||++ .++.++++++++|+++ +++|+.|++||||+...+..++..+. ..++++.||+.|+. .+.
T Consensus 1 m~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~ 76 (272)
T PRK15126 1 MARLAAFDMDGTLLM---PDHHLGEKTLSTLARL-RERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGE 76 (272)
T ss_pred CccEEEEeCCCcCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCC
Confidence 379999999999999 7889999999999999 89999999999999999999886653 34578999999986 333
Q ss_pred cceEEccccccchHHHHHHHHHHH----HhccCCcceEecccc---------eEEEee---ccCC-Ccc------c-hhh
Q 003042 662 SAWEICSLTRDFDWKEIAEPVMKL----YTETTDGSFIEDKET---------AIVWHH---QHAD-PHF------G-SCQ 717 (854)
Q Consensus 662 ~~~~~~~~~~~~~~~~~v~~~~~~----y~~~~~g~~ie~k~~---------~l~~~~---~~~d-~~~------~-~~~ 717 (854)
..+...++... +.+.+....+. +.....+.+...... ...... .... ... . ...
T Consensus 77 ~l~~~~i~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~ 154 (272)
T PRK15126 77 LLHRQDLPADV--AELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDD 154 (272)
T ss_pred EEEeecCCHHH--HHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHH
Confidence 34444433221 11211111000 000011111110000 000000 0000 000 0 112
Q ss_pred HHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCC
Q 003042 718 AKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPS 797 (854)
Q Consensus 718 ~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~ 797 (854)
..++...+.+.+......+.++..++||+|+|+|||.|++++++++ |++++++++|||+.||++||+.+|.
T Consensus 155 ~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml~~ag~------ 225 (272)
T PRK15126 155 LTRLQIQLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHL---GLSLADCMAFGDAMNDREMLGSVGR------ 225 (272)
T ss_pred HHHHHHHHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHh---CCCHHHeEEecCCHHHHHHHHHcCC------
Confidence 2333444444444333445566789999999999999999999999 9999999999999999999999996
Q ss_pred CCCCccEEEEEecCC----Ccccce--EeC--CHhHHHHHHHHHHh
Q 003042 798 VPGIAEVFACTVGQK----PSMAKY--YLD--DTAEVINLLEGLAT 835 (854)
Q Consensus 798 ~~~~~~~~aV~vG~~----~s~A~y--~l~--~~~eV~~~L~~l~~ 835 (854)
+|+||++ +..|+| ++. +.++|.++|+++..
T Consensus 226 --------~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~ 263 (272)
T PRK15126 226 --------GFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLD 263 (272)
T ss_pred --------ceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence 5777775 466776 553 56789999999873
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=7e-26 Score=243.38 Aligned_cols=223 Identities=18% Similarity=0.196 Sum_probs=150.3
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEEC-CCc
Q 003042 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS-KNS 662 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~-~~~ 662 (854)
+|+|++|+||||++ +++.++++++++|+++ +++|+.|+|||||+...+.+++..+. ..++++.||+.|+.. +..
T Consensus 2 ikli~~DlDGTLl~---~~~~is~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~ 77 (266)
T PRK10976 2 YQVVASDLDGTLLS---PDHTLSPYAKETLKLL-TARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNL 77 (266)
T ss_pred ceEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCE
Confidence 79999999999999 7788999999999999 89999999999999999998886653 335789999999864 333
Q ss_pred ceEEccccccchHHHHHHHHHHHHhc---------cCCcceEecccc-----------eEEEe-eccCCC-cc----c--
Q 003042 663 AWEICSLTRDFDWKEIAEPVMKLYTE---------TTDGSFIEDKET-----------AIVWH-HQHADP-HF----G-- 714 (854)
Q Consensus 663 ~~~~~~~~~~~~~~~~v~~~~~~y~~---------~~~g~~ie~k~~-----------~l~~~-~~~~d~-~~----~-- 714 (854)
.+...++.. .+.++++...+ ...+.+...... ..... ...... .. .
T Consensus 78 i~~~~l~~~------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~ 151 (266)
T PRK10976 78 IFSHNLDRD------IASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTC 151 (266)
T ss_pred ehhhcCCHH------HHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEc
Confidence 333333221 12222221111 111112111000 00000 000000 00 0
Q ss_pred --hhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 715 --SCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 715 --~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
.....++.+.+.+.+......+.++..++||+|+|+|||.|++++++++ |++++++++|||+.||++||+.+|.
T Consensus 152 ~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~l---gi~~~~viafGD~~NDi~Ml~~ag~- 227 (266)
T PRK10976 152 DSHEKLLPLEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKL---GYSLKDCIAFGDGMNDAEMLSMAGK- 227 (266)
T ss_pred CCHHHHHHHHHHHHHHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHc---CCCHHHeEEEcCCcccHHHHHHcCC-
Confidence 0112223334444443333445567789999999999999999999999 9999999999999999999999997
Q ss_pred cCCCCCCCCccEEEEEecCC----Ccccc--eEeC--CHhHHHHHHHHHH
Q 003042 793 VADPSVPGIAEVFACTVGQK----PSMAK--YYLD--DTAEVINLLEGLA 834 (854)
Q Consensus 793 ~~~~~~~~~~~~~aV~vG~~----~s~A~--y~l~--~~~eV~~~L~~l~ 834 (854)
+|+||++ +..|+ +++. +.++|.++|+++.
T Consensus 228 -------------~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 228 -------------GCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred -------------CeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 5777775 46665 6664 5678999998875
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=245.48 Aligned_cols=301 Identities=18% Similarity=0.159 Sum_probs=207.6
Q ss_pred hhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhh
Q 003042 166 RGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLL 245 (854)
Q Consensus 166 ~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll 245 (854)
...+..|...++.++.++....++ |+||+||++.+.++...+. ..+|+.+++|.++.... + .....+.+.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~--Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~--~--~~~~~~~~~~~ 134 (372)
T cd03792 63 EEEKEIYLEWNEENAERPLLDLDA--DVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN--R--RVWDFLQPYIE 134 (372)
T ss_pred HHHHHHHHHHHHHHhccccccCCC--CEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc--H--HHHHHHHHHHH
Confidence 446788888888887764444444 9999999998877766553 36789999999885431 0 01122233344
Q ss_pred cCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc--
Q 003042 246 NSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-- 323 (854)
Q Consensus 246 ~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-- 323 (854)
.+|.+.+.+.++++.++ ..+ ++ ++|+|||+.........+ .....+++++
T Consensus 135 ~~d~~i~~~~~~~~~~~----------------------~~~--~~-vipngvd~~~~~~~~~~~---~~~~~~~~~~~~ 186 (372)
T cd03792 135 DYDAAVFHLPEYVPPQV----------------------PPR--KV-IIPPSIDPLSGKNRELSP---ADIEYILEKYGI 186 (372)
T ss_pred hCCEEeecHHHhcCCCC----------------------CCc--eE-EeCCCCCCCccccCCCCH---HHHHHHHHHhCC
Confidence 57777776643322111 111 23 899999975322111111 2233455555
Q ss_pred -CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCc
Q 003042 324 -DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (854)
Q Consensus 324 -~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~ 402 (854)
.++++|++|||+++.||+..+++||+.+.+++|+++ |+++|..... .++..++.+++.+ +.+ ...
T Consensus 187 ~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~~-~~~~~~~~~~~~~---~~~------~~~ 252 (372)
T cd03792 187 DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGATD-DPEGWIVYEEVLE---YAE------GDP 252 (372)
T ss_pred CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCCC-CchhHHHHHHHHH---HhC------CCC
Confidence 478899999999999999999999999988888765 8888864321 1222333232222 211 112
Q ss_pred cEEEEcCC-CChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcccccc
Q 003042 403 PIVIIKEP-LSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS 481 (854)
Q Consensus 403 pv~~~~~~-~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 481 (854)
.++++... ++.+++.++|++||+|++||.+||||++++|||+| |.|+|+|+.+|..+.
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~---------------------G~Pvv~s~~~~~~~~ 311 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWK---------------------GKPVIAGPVGGIPLQ 311 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHc---------------------CCCEEEcCCCCchhh
Confidence 35555543 48999999999999999999999999999999999 459999999998887
Q ss_pred CC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccc-cccChHHHHHHHHHHHHH
Q 003042 482 LS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 482 l~---~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 540 (854)
+. .|+++++ .+++|++|.++++++ ++++.+.+..++++ .++++...++++++.+++
T Consensus 312 i~~~~~g~~~~~--~~~~a~~i~~ll~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 312 IEDGETGFLVDT--VEEAAVRILYLLRDP-ELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred cccCCceEEeCC--cHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 73 3777764 678999999999865 45556666667766 579999999999887764
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.7e-24 Score=223.42 Aligned_cols=217 Identities=21% Similarity=0.232 Sum_probs=148.0
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEEC--
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS-- 659 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~-- 659 (854)
|++|+|++||||||++ .++.+++++.++|+++ +++|+.|+|||||+...+..++..++ ..+++++||+.+...
T Consensus 1 m~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~ 76 (230)
T PRK01158 1 MKIKAIAIDIDGTITD---KDRRLSLKAVEAIRKA-EKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFD 76 (230)
T ss_pred CceeEEEEecCCCcCC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCC
Confidence 4679999999999999 7888999999999999 89999999999999999988776553 346889999999876
Q ss_pred CCcceEEccccccchHHHHHHHHHHHHhccCCcceEecc-cceE--EEeeccCCCccchhhHHHHHHHHHHHhcCCCEEE
Q 003042 660 KNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDK-ETAI--VWHHQHADPHFGSCQAKELLDHLENVLANEPVVV 736 (854)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k-~~~l--~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v 736 (854)
+...+...++ ...+.+....+.|.... ..+.... .... ...+.. ...+++.+.++. +. ....+
T Consensus 77 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~-~~-~~~~~ 142 (230)
T PRK01158 77 GKRIFLGDIE----ECEKAYSELKKRFPEAS-TSLTKLDPDYRKTEVALRRT-------VPVEEVRELLEE-LG-LDLEI 142 (230)
T ss_pred CCEEEEcchH----HHHHHHHHHHHhccccc-eeeecCCcccccceeeeccc-------ccHHHHHHHHHH-cC-CcEEE
Confidence 3333333221 12222222222221110 0000000 0000 000000 011222222322 21 12445
Q ss_pred EEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----
Q 003042 737 KRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK---- 812 (854)
Q Consensus 737 ~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~---- 812 (854)
..+..++|+.|+++|||.|++++++++ |++++++++|||+.||++||+.+|. +|+||++
T Consensus 143 ~~~~~~~ei~~~~~~Kg~al~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~--------------~vam~Na~~~v 205 (230)
T PRK01158 143 VDSGFAIHIKSPGVNKGTGLKKLAELM---GIDPEEVAAIGDSENDLEMFEVAGF--------------GVAVANADEEL 205 (230)
T ss_pred EecceEEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHHhcCc--------------eEEecCccHHH
Confidence 555678999999999999999999999 9999999999999999999999986 5777775
Q ss_pred CcccceEeC--CHhHHHHHHHHHH
Q 003042 813 PSMAKYYLD--DTAEVINLLEGLA 834 (854)
Q Consensus 813 ~s~A~y~l~--~~~eV~~~L~~l~ 834 (854)
+..|+|++. +.++|.+.|+++.
T Consensus 206 k~~a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 206 KEAADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred HHhcceEecCCCcChHHHHHHHHh
Confidence 478999885 4677999998763
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-23 Score=244.77 Aligned_cols=230 Identities=19% Similarity=0.200 Sum_probs=154.1
Q ss_pred HHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc---cc-------
Q 003042 577 ASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE---KL------- 646 (854)
Q Consensus 577 ~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~---~l------- 646 (854)
.+.| ++++|+|++|+||||++ +++.++++++++|+++ +++|+.|+|||||+...+..++..+. ..
T Consensus 301 ~~~~-~~~iKLIa~DLDGTLLn---~d~~Is~~t~eAI~kl-~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~ 375 (580)
T PLN02887 301 LRFY-KPKFSYIFCDMDGTLLN---SKSQISETNAKALKEA-LSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISESS 375 (580)
T ss_pred hhhh-ccCccEEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecc
Confidence 3444 56799999999999999 7889999999999999 99999999999999999988876542 11
Q ss_pred ceeecCcEEEEEC-CCcceEEccccccchHHHHHHHHHHHHhc--------cCCcceEecccceEE-Ee--e--------
Q 003042 647 GLSAEHGYFTRWS-KNSAWEICSLTRDFDWKEIAEPVMKLYTE--------TTDGSFIEDKETAIV-WH--H-------- 706 (854)
Q Consensus 647 ~liaenG~~I~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~y~~--------~~~g~~ie~k~~~l~-~~--~-------- 706 (854)
+.++.||+.|+.. +...+...++.. .+.++++...+ ..++.|......... .+ +
T Consensus 376 p~I~~NGA~I~d~~g~~I~~~~L~~e------~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i 449 (580)
T PLN02887 376 PGVFLQGLLVYGRQGREIYRSNLDQE------VCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIM 449 (580)
T ss_pred cEEeecCeEEEECCCcEEEEEeCCHH------HHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhcccccccc
Confidence 3456689888753 333444443322 22222221111 111222110000000 00 0
Q ss_pred ---ccC-C-Ccc---ch-hh----HHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeE
Q 003042 707 ---QHA-D-PHF---GS-CQ----AKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFV 773 (854)
Q Consensus 707 ---~~~-d-~~~---~~-~~----~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~v 773 (854)
.+. . ... .. .. ..++...+.+.+......+.++..++||+|+|+|||.|++.+++++ |++++++
T Consensus 450 ~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~l---GI~~eev 526 (580)
T PLN02887 450 SSVDQLLAAADIQKVIFLDTAEGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHL---GVSPDEI 526 (580)
T ss_pred CCHHHhhcccCeeEEEEEcChHHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHc---CCCHHHE
Confidence 000 0 000 00 00 1123333444444334456677889999999999999999999999 9999999
Q ss_pred EEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeC--CHhHHHHHHHHHH
Q 003042 774 LCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLD--DTAEVINLLEGLA 834 (854)
Q Consensus 774 laiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~--~~~eV~~~L~~l~ 834 (854)
++|||+.||++||+.+|. +|+||++ +..|+|++. +.++|.+.|++++
T Consensus 527 iAFGDs~NDIeMLe~AG~--------------gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 527 MAIGDGENDIEMLQLASL--------------GVALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred EEEecchhhHHHHHHCCC--------------EEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 999999999999999996 6888876 578999885 5688999998763
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.6e-23 Score=231.74 Aligned_cols=269 Identities=19% Similarity=0.276 Sum_probs=197.5
Q ss_pred CCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhC
Q 003042 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLG 270 (854)
Q Consensus 191 ~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg 270 (854)
.|+|+||+. +-+...++++.|++++.+.+|..|.. +.++ .++.|-+.+. +.+.++.. .+
T Consensus 100 ~~vi~v~~~--~~~~~~~~~~~~~~~~v~~~h~~~~~-~~~~-------------~~~~ii~~S~-~~~~~~~~---~~- 158 (380)
T PRK15484 100 DSVIVIHNS--MKLYRQIRERAPQAKLVMHMHNAFEP-ELLD-------------KNAKIIVPSQ-FLKKFYEE---RL- 158 (380)
T ss_pred CcEEEEeCc--HHhHHHHHhhCCCCCEEEEEecccCh-hHhc-------------cCCEEEEcCH-HHHHHHHh---hC-
Confidence 499999973 34556678889999999999977632 1221 3677766654 44444331 00
Q ss_pred ccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccccCCHHHHHHH
Q 003042 271 LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGISLKFLA 347 (854)
Q Consensus 271 ~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~~KGi~~~l~A 347 (854)
...++.++|+|||...|... .. ..+++++ .++++|+++||+.+.||+..+++|
T Consensus 159 ----------------~~~~i~vIpngvd~~~~~~~-----~~---~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A 214 (380)
T PRK15484 159 ----------------PNADISIVPNGFCLETYQSN-----PQ---PNLRQQLNISPDETVLLYAGRISPDKGILLLMQA 214 (380)
T ss_pred ----------------CCCCEEEecCCCCHHHcCCc-----ch---HHHHHHhCCCCCCeEEEEeccCccccCHHHHHHH
Confidence 01246789999998877521 11 1233343 367899999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEE
Q 003042 348 MGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCV 427 (854)
Q Consensus 348 ~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~v 427 (854)
+.++.+++|+++ |+++|.+......+..++.+++.+++.+++. .+ .+.|.++.+++..+|+.||+||
T Consensus 215 ~~~l~~~~p~~~----lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v-~~~G~~~~~~l~~~~~~aDv~v 281 (380)
T PRK15484 215 FEKLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RC-IMLGGQPPEKMHNYYPLADLVV 281 (380)
T ss_pred HHHHHHhCCCeE----EEEEeCCccccccchhHHHHHHHHHHHhcCC--------cE-EEeCCCCHHHHHHHHHhCCEEE
Confidence 999999999765 8888865432222334566677666655431 23 4666789999999999999999
Q ss_pred EccC-ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---Cce-EeCCCCHHHHHHHHHH
Q 003042 428 VNCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAI-RVNPWNVDAVADAMDS 502 (854)
Q Consensus 428 v~S~-~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai-~vnP~d~~~~A~ai~~ 502 (854)
+||. .||||++++|||+| |.|+|+|..+|..+.+. .|+ +++|.|++++|++|.+
T Consensus 282 ~pS~~~E~f~~~~lEAma~---------------------G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ 340 (380)
T PRK15484 282 VPSQVEEAFCMVAVEAMAA---------------------GKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINR 340 (380)
T ss_pred eCCCCccccccHHHHHHHc---------------------CCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHH
Confidence 9997 49999999999999 45999999988888773 265 6789999999999999
Q ss_pred HhcCCHHHHHHHHHHHhcc-ccccChHHHHHHHHHHHHH
Q 003042 503 ALQMENQEKILRHEKHYKY-ISSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 503 aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l~~l~~ 540 (854)
++++++. + .+.++.+++ ..++++...++++++.++.
T Consensus 341 ll~d~~~-~-~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 341 TLADPEL-T-QIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred HHcCHHH-H-HHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 9988753 3 344555554 4679999999999988865
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.9e-24 Score=227.58 Aligned_cols=226 Identities=15% Similarity=0.127 Sum_probs=147.0
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc--ccceeecCcEEEEECCC
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE--KLGLSAEHGYFTRWSKN 661 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~--~l~liaenG~~I~~~~~ 661 (854)
.+|+|++|+||||++ +++.+++.++++|++| +++|+.|++||||+...+..++..+. ..+++++||+.|+.+..
T Consensus 6 ~~~lI~~DlDGTLL~---~~~~i~~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~ 81 (271)
T PRK03669 6 DPLLIFTDLDGTLLD---SHTYDWQPAAPWLTRL-REAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQ 81 (271)
T ss_pred CCeEEEEeCccCCcC---CCCcCcHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCc
Confidence 479999999999999 7778899999999999 89999999999999999999887653 24689999999987643
Q ss_pred c-------ceEEccccccchHHHHHHHHHHHHhccCC-cceEecc----c-ceEE-Ee-----eccCCC---ccchhhHH
Q 003042 662 S-------AWEICSLTRDFDWKEIAEPVMKLYTETTD-GSFIEDK----E-TAIV-WH-----HQHADP---HFGSCQAK 719 (854)
Q Consensus 662 ~-------~~~~~~~~~~~~~~~~v~~~~~~y~~~~~-g~~ie~k----~-~~l~-~~-----~~~~d~---~~~~~~~~ 719 (854)
. .+...++.. .+..+++...+... ....... . .... .. ...... .+......
T Consensus 82 ~~~~~~~~~~~~~l~~~------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (271)
T PRK03669 82 WQDHPDFPRIISGISHG------EIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSD 155 (271)
T ss_pred ccCCCCceEeecCCCHH------HHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCH
Confidence 1 112222211 12222211111000 0000000 0 0000 00 000000 00000001
Q ss_pred HHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCC---CCCeEEEEeCCcccHHHHHHhhhhcCCC
Q 003042 720 ELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGK---SPDFVLCIGDDRSDEDMFESIEQAVADP 796 (854)
Q Consensus 720 el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi---~~d~vlaiGDs~ND~~Mf~~ag~~~~~~ 796 (854)
+....+.+.+....+.+..+..++||+|+++|||.|++++++++ |+ +++++++|||+.||++||+.+|.
T Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~l---gi~~~~~~~viafGDs~NDi~Ml~~ag~----- 227 (271)
T PRK03669 156 ERMAQFTARLAELGLQFVQGARFWHVLDASAGKDQAANWLIATY---QQLSGTRPTTLGLGDGPNDAPLLDVMDY----- 227 (271)
T ss_pred HHHHHHHHHHHHCCCEEEecCeeEEEecCCCCHHHHHHHHHHHH---HhhcCCCceEEEEcCCHHHHHHHHhCCE-----
Confidence 12222333332223344455578999999999999999999999 99 99999999999999999999985
Q ss_pred CCCCCccEEEEEecCCC----------cccceEeC--CHhHHHHHHHHHHhc
Q 003042 797 SVPGIAEVFACTVGQKP----------SMAKYYLD--DTAEVINLLEGLATE 836 (854)
Q Consensus 797 ~~~~~~~~~aV~vG~~~----------s~A~y~l~--~~~eV~~~L~~l~~~ 836 (854)
+|+||+.. ..|+|+++ +.+++.+.|+++..+
T Consensus 228 ---------gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~~ 270 (271)
T PRK03669 228 ---------AVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDHFFSA 270 (271)
T ss_pred ---------EEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHHHHhc
Confidence 67777432 25778886 467999999988764
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-22 Score=241.53 Aligned_cols=320 Identities=14% Similarity=0.135 Sum_probs=214.8
Q ss_pred HHHHHHHHHHHHHHHHHh-cCCCCCeEEEeCcccchHHHHHHhc-----cCCCeEEEEecCC-----CCChhhhhc-CCC
Q 003042 169 WQAYLSANKVFADKVMEV-INPDEDYVWIHDYHLMVLPSFLRKR-----FHRVKVGFFLHSP-----FPSSEIYRT-LPV 236 (854)
Q Consensus 169 w~~Y~~vN~~fa~~i~~~-~~~~~D~vwihDyhl~llp~~lr~~-----~~~~~i~~flH~p-----fP~~e~~~~-lp~ 236 (854)
...|.-+.+..++-+... .+| |||++||+|-.++|.++.+. +.++++.|++|-- ||...+..+ +|+
T Consensus 590 ~~RF~~FsrAaLe~~~~~~~~P--DIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~ 667 (977)
T PLN02939 590 FKRFSYFSRAALELLYQSGKKP--DIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDV 667 (977)
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--CEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCH
Confidence 344555556666555432 356 89999999999985544432 4568999999954 332222111 221
Q ss_pred ---------------hHHHH-HHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCc
Q 003042 237 ---------------RDEIL-KSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHM 300 (854)
Q Consensus 237 ---------------r~eil-~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~ 300 (854)
+-.++ -|+..||.|-.-++.|++.-++ ..--|++. .+..+..++.++|+|||+
T Consensus 668 ~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~---------~L~~~~~Kl~gIlNGID~ 736 (977)
T PLN02939 668 HQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD---------TLKFHSKKFVGILNGIDT 736 (977)
T ss_pred HHccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH---------HhccccCCceEEecceeh
Confidence 11223 3677899999889999987654 11011110 122345578899999999
Q ss_pred hHHHhhhCC-------c----hHHHHHHHHHHHcC------CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEE
Q 003042 301 GQFESIMSL-------D----VTGQKVKELKEKFD------GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVV 363 (854)
Q Consensus 301 ~~~~~~~~~-------~----~~~~~~~~l~~~~~------~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vv 363 (854)
+.|.+.... . ........++++++ +.++|++|||+++.||+..++.|+.++++ ++ +.
T Consensus 737 e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d----vq 810 (977)
T PLN02939 737 DTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG----GQ 810 (977)
T ss_pred hhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----CE
Confidence 988643210 0 00112345677762 35899999999999999999999998875 33 44
Q ss_pred EEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeee
Q 003042 364 LVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYT 443 (854)
Q Consensus 364 Lvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~ 443 (854)
||++|. |++ ..+++++..++.+.+ ..+.+.|.+.++..+...+|+.||+||+||.+|||||+.+|||
T Consensus 811 LVIvGd-----Gp~-~~~e~eL~~La~~l~-------l~drV~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAM 877 (977)
T PLN02939 811 FVLLGS-----SPV-PHIQREFEGIADQFQ-------SNNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAM 877 (977)
T ss_pred EEEEeC-----CCc-HHHHHHHHHHHHHcC-------CCCeEEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHH
Confidence 777773 222 134555666665532 1223444556777777899999999999999999999999999
Q ss_pred eeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC------------CceEeCCCCHHHHHHHHHHHhc---CCH
Q 003042 444 VSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS------------GAIRVNPWNVDAVADAMDSALQ---MEN 508 (854)
Q Consensus 444 a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------------~ai~vnP~d~~~~A~ai~~aL~---m~~ 508 (854)
+| |.|+|++..+|..+.+. +|++++|.|+++++++|.+++. ..+
T Consensus 878 Ay---------------------GtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dp 936 (977)
T PLN02939 878 RY---------------------GSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKP 936 (977)
T ss_pred HC---------------------CCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCH
Confidence 99 45999999999887662 4899999999999999999986 233
Q ss_pred HHHHHHHHHHhccccccChHHHHHHHHHHHHHHHH
Q 003042 509 QEKILRHEKHYKYISSHDVAYWAKSIDQDLERACR 543 (854)
Q Consensus 509 ~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~ 543 (854)
+.++...++. ....+++...++++++-..++..
T Consensus 937 e~~~~L~~~a--m~~dFSWe~~A~qYeeLY~~ll~ 969 (977)
T PLN02939 937 EVWKQLVQKD--MNIDFSWDSSASQYEELYQRAVA 969 (977)
T ss_pred HHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence 3333332222 23568999999998877766543
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.6e-23 Score=235.18 Aligned_cols=315 Identities=15% Similarity=0.111 Sum_probs=197.1
Q ss_pred HHHHHHHHHHHHHHHHHhc-CCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChh--hhh------------c
Q 003042 169 WQAYLSANKVFADKVMEVI-NPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSE--IYR------------T 233 (854)
Q Consensus 169 w~~Y~~vN~~fa~~i~~~~-~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e--~~~------------~ 233 (854)
|.....+...+...+.+.. +| |+|++|+++--++..++++.. ++|+.++.|....... +.. .
T Consensus 94 ~~~~~~~~~~l~~~~~~~~~~~--DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (439)
T TIGR02472 94 WPYLDELADNLLQHLRQQGHLP--DLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYN 170 (439)
T ss_pred hhhHHHHHHHHHHHHHHcCCCC--CEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcc
Confidence 4444444455555443322 45 999999987666666665544 6789999997532210 000 0
Q ss_pred CCChHH-HHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchH
Q 003042 234 LPVRDE-ILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVT 312 (854)
Q Consensus 234 lp~r~e-il~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~ 312 (854)
++.+-. ....+..+|.|-..+...++.-+. .. .+-...++.++|+|||++.|.+....+..
T Consensus 171 ~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~---~~---------------~~~~~~ki~vIpnGvd~~~f~~~~~~~~~ 232 (439)
T TIGR02472 171 ISRRIEAEEETLAHASLVITSTHQEIEEQYA---LY---------------DSYQPERMQVIPPGVDLSRFYPPQSSEET 232 (439)
T ss_pred hHHHHHHHHHHHHhCCEEEECCHHHHHHHHH---hc---------------cCCCccceEEECCCcChhhcCCCCccccc
Confidence 011100 011233466555544332221110 00 01123467889999999988643221111
Q ss_pred HHHHHHHHHHc--CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHH----HHHHHHH
Q 003042 313 GQKVKELKEKF--DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQ----DLLSDTN 386 (854)
Q Consensus 313 ~~~~~~l~~~~--~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~----~l~~~v~ 386 (854)
......+++.. +++++|++|||+++.||+..+|+||.++.+..+.. ++++ .+|... +.+.++ ++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~--~~~~l~~~~~~~~~~~~ 307 (439)
T TIGR02472 233 SEIDNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRD--DIRKMESQQREVLQKVL 307 (439)
T ss_pred hhHHHHHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCcc--ccccccHHHHHHHHHHH
Confidence 11111222221 46789999999999999999999998643221111 2332 234211 111111 2223334
Q ss_pred HHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhC----cEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCC
Q 003042 387 RIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIA----ECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKN 462 (854)
Q Consensus 387 ~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~A----Dv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~ 462 (854)
.++++ .++...+.|.+.++.+++.++|+.| |+||+||.+||||++++|||||
T Consensus 308 ~~~~~-------~~l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~----------------- 363 (439)
T TIGR02472 308 LLIDR-------YDLYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAAC----------------- 363 (439)
T ss_pred HHHHH-------cCCCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHh-----------------
Confidence 44444 3344456678889999999999988 9999999999999999999999
Q ss_pred CCCCCceEEEecCccccccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccc-cccChHHHHHHHHHHH
Q 003042 463 PPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDL 538 (854)
Q Consensus 463 ~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l 538 (854)
+.|+|+|..+|+.+.+. +|++|+|.|++++|++|.++++.+. +++...++.++++ .++++..-++++++-|
T Consensus 364 ----G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~~~-~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 364 ----GLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSS-QWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred ----CCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 45999999999888883 4899999999999999999998664 4555666666655 5689999888887654
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-22 Score=243.52 Aligned_cols=309 Identities=13% Similarity=0.108 Sum_probs=216.6
Q ss_pred cHHHHHHHHHHHHHHHHHh-cCCCCCeEEEeCcccchHHHHHHhc-----cCCCeEEEEecCCCCChhhhhcCCChHHHH
Q 003042 168 EWQAYLSANKVFADKVMEV-INPDEDYVWIHDYHLMVLPSFLRKR-----FHRVKVGFFLHSPFPSSEIYRTLPVRDEIL 241 (854)
Q Consensus 168 ~w~~Y~~vN~~fa~~i~~~-~~~~~D~vwihDyhl~llp~~lr~~-----~~~~~i~~flH~pfP~~e~~~~lp~r~eil 241 (854)
....|..+++..++.+... .+| |||++||.|-.++|.++++. +.++++.++.|-.- |. +..+-
T Consensus 688 d~~RF~~F~~Aale~l~~~~~~P--DIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~-----~~----~n~lk 756 (1036)
T PLN02316 688 DGERFGFFCHAALEFLLQSGFHP--DIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLE-----FG----ANHIG 756 (1036)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCC--CEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcc-----cc----hhHHH
Confidence 3445556666666655432 345 99999999999999999875 35689999999431 11 12244
Q ss_pred HHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhC-------Cch---
Q 003042 242 KSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMS-------LDV--- 311 (854)
Q Consensus 242 ~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~-------~~~--- 311 (854)
.++..||.|---++.|++..+.. + . + ..+..++.++|+|||++.|.+... +.+
T Consensus 757 ~~l~~AD~ViTVS~tya~EI~~~-----~--------~--l--~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~ 819 (1036)
T PLN02316 757 KAMAYADKATTVSPTYSREVSGN-----S--------A--I--APHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVV 819 (1036)
T ss_pred HHHHHCCEEEeCCHHHHHHHHhc-----c--------C--c--ccccCCEEEEECCccccccCCcccccccccCCchhhh
Confidence 56778999998899888775531 0 0 0 112346789999999988754311 000
Q ss_pred --HHHHHHHHHHHcC----CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHH
Q 003042 312 --TGQKVKELKEKFD----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDT 385 (854)
Q Consensus 312 --~~~~~~~l~~~~~----~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v 385 (854)
.......+++++. +.++|++||||++.||+..+++|+.++++. + +.||++|. |++ ..+++++
T Consensus 820 ~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~-----Gpd-~~~e~~l 887 (1036)
T PLN02316 820 EGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGS-----APD-PRIQNDF 887 (1036)
T ss_pred hhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeC-----CCC-HHHHHHH
Confidence 0122345666662 578999999999999999999999999863 2 34676763 233 2456677
Q ss_pred HHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCC
Q 003042 386 NRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQ 465 (854)
Q Consensus 386 ~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~ 465 (854)
.+++.+++..+.. .|.+. +..+......+|++||+||+||..|||||+.+|||+|
T Consensus 888 ~~La~~Lg~~~~~----rV~f~-g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~-------------------- 942 (1036)
T PLN02316 888 VNLANQLHSSHHD----RARLC-LTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRY-------------------- 942 (1036)
T ss_pred HHHHHHhCccCCC----eEEEE-ecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHc--------------------
Confidence 7777776544321 24433 3344433348999999999999999999999999999
Q ss_pred CCceEEEecCccccccC-C---------------CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccc-cccChH
Q 003042 466 KKSVIIVSEFIGCSPSL-S---------------GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVA 528 (854)
Q Consensus 466 ~~g~lV~Se~~G~~~~l-~---------------~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~ 528 (854)
|.|+|++..+|..+.+ + .|++|+|.|++++++||.++|......+....+..++.+ ..+++.
T Consensus 943 -GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~ 1021 (1036)
T PLN02316 943 -GSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWN 1021 (1036)
T ss_pred -CCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHH
Confidence 4589999999999887 2 389999999999999999999864333333333334443 458999
Q ss_pred HHHHHHHHHHHHHH
Q 003042 529 YWAKSIDQDLERAC 542 (854)
Q Consensus 529 ~W~~~~l~~l~~~~ 542 (854)
.-+.++++-.+++.
T Consensus 1022 ~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 1022 RPALDYMELYHSAR 1035 (1036)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999887776654
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.2e-23 Score=222.42 Aligned_cols=229 Identities=18% Similarity=0.211 Sum_probs=148.3
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEEC-C
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS-K 660 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~-~ 660 (854)
|++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||+...+..++..+. ..++++.||+.|+.. +
T Consensus 1 M~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~~-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~ 76 (272)
T PRK10530 1 MTYRVIALDLDGTLLT---PKKTILPESLEALARA-REAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQA 76 (272)
T ss_pred CCccEEEEeCCCceEC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCC
Confidence 4689999999999999 7888999999999999 89999999999999999998887663 345899999999864 2
Q ss_pred Cc-ceEEccccccc-hHHHHHHHH-HHHHhccCCcceEeccc----------ceEEE----eeccCCC--------c---
Q 003042 661 NS-AWEICSLTRDF-DWKEIAEPV-MKLYTETTDGSFIEDKE----------TAIVW----HHQHADP--------H--- 712 (854)
Q Consensus 661 ~~-~~~~~~~~~~~-~~~~~v~~~-~~~y~~~~~g~~ie~k~----------~~l~~----~~~~~d~--------~--- 712 (854)
+. .+...++.... .+.+.+++. ...+.....+.+..... ..... .+...+. .
T Consensus 77 ~~~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
T PRK10530 77 KKVLEADPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAIW 156 (272)
T ss_pred CEEEEecCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcCCcE
Confidence 32 33333332211 111111110 00000000111111000 00000 0000000 0
Q ss_pred -cch-----hhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHH
Q 003042 713 -FGS-----CQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMF 786 (854)
Q Consensus 713 -~~~-----~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf 786 (854)
+.. ....++.+.+.+.+. .....++..++|+.+++++||.+++.+++++ |++++++++|||+.||++||
T Consensus 157 ~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~---gi~~~e~i~~GD~~NDi~m~ 231 (272)
T PRK10530 157 KFALTHEDLPQLQHFAKHVEHELG--LECEWSWHDQVDIARKGNSKGKRLTQWVEAQ---GWSMKNVVAFGDNFNDISML 231 (272)
T ss_pred EEEEecCCHHHHHHHHHHHhhhcC--ceEEEecCceEEEecCCCChHHHHHHHHHHc---CCCHHHeEEeCCChhhHHHH
Confidence 000 011222222222221 1233455678999999999999999999999 99999999999999999999
Q ss_pred HHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeC--CHhHHHHHHHHHH
Q 003042 787 ESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLD--DTAEVINLLEGLA 834 (854)
Q Consensus 787 ~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~--~~~eV~~~L~~l~ 834 (854)
+.+|. +|+||++ +..|+|+++ +.++|.++|+++.
T Consensus 232 ~~ag~--------------~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 232 EAAGL--------------GVAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred HhcCc--------------eEEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 99985 6777775 467999885 4677999998764
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.1e-23 Score=217.84 Aligned_cols=220 Identities=23% Similarity=0.338 Sum_probs=153.0
Q ss_pred EEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECCCc-ceE
Q 003042 588 ILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKNS-AWE 665 (854)
Q Consensus 588 I~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~~~-~~~ 665 (854)
|++|+||||++ ++..++++++++|++| +++|+.++++|||++..+.+++..++ ..++++.||+++....+. .+.
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~ 76 (254)
T PF08282_consen 1 IFSDLDGTLLN---SDGKISPETIEALKEL-QEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYE 76 (254)
T ss_dssp EEEECCTTTCS---TTSSSCHHHHHHHHHH-HHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEE
T ss_pred cEEEECCceec---CCCeeCHHHHHHHHhh-cccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchh
Confidence 79999999999 7888999999999999 88999999999999999999997664 358899999999444333 344
Q ss_pred EccccccchHHHHHHHHHHH----HhccCCcceEeccc-----------ceEEEeec--c--CCCc-----c--chhhHH
Q 003042 666 ICSLTRDFDWKEIAEPVMKL----YTETTDGSFIEDKE-----------TAIVWHHQ--H--ADPH-----F--GSCQAK 719 (854)
Q Consensus 666 ~~~~~~~~~~~~~v~~~~~~----y~~~~~g~~ie~k~-----------~~l~~~~~--~--~d~~-----~--~~~~~~ 719 (854)
..++.. .+.+.++...+. +.....+.+..... ........ . .... + ......
T Consensus 77 ~~i~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~ 154 (254)
T PF08282_consen 77 KPIDSD--DVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLE 154 (254)
T ss_dssp ESB-HH--HHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHH
T ss_pred hheecc--chhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhh
Confidence 433311 122222221111 01111122222110 00000000 0 0000 0 113445
Q ss_pred HHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCC
Q 003042 720 ELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVP 799 (854)
Q Consensus 720 el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~ 799 (854)
.+.+.+.+.+.+....+.++..++||+|+++|||.|++.+++++ |++++++++|||+.||++||+.++.
T Consensus 155 ~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~---~i~~~~~~~~GD~~ND~~Ml~~~~~-------- 223 (254)
T PF08282_consen 155 QLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYL---GISPEDIIAFGDSENDIEMLELAGY-------- 223 (254)
T ss_dssp HHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHH---TTSGGGEEEEESSGGGHHHHHHSSE--------
T ss_pred hhhhhhccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhc---ccccceeEEeecccccHhHHhhcCe--------
Confidence 56677777766655677889999999999999999999999999 9999999999999999999999985
Q ss_pred CCccEEEEEecCC----CcccceEeCCH--hHHHHHH
Q 003042 800 GIAEVFACTVGQK----PSMAKYYLDDT--AEVINLL 830 (854)
Q Consensus 800 ~~~~~~aV~vG~~----~s~A~y~l~~~--~eV~~~L 830 (854)
+|+||++ +..|++++.+. ++|++.|
T Consensus 224 ------~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 224 ------SVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp ------EEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred ------EEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 7888876 57899988643 6677654
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-22 Score=233.31 Aligned_cols=294 Identities=18% Similarity=0.194 Sum_probs=196.0
Q ss_pred CeEEEeCcccchHHHHHHhcc----CCCeEEEEecCCCC----ChhhhhcC--CC-------------hHHHHHHhhcCC
Q 003042 192 DYVWIHDYHLMVLPSFLRKRF----HRVKVGFFLHSPFP----SSEIYRTL--PV-------------RDEILKSLLNSD 248 (854)
Q Consensus 192 D~vwihDyhl~llp~~lr~~~----~~~~i~~flH~pfP----~~e~~~~l--p~-------------r~eil~~ll~~d 248 (854)
|+|++||+|--++|.+++++. .++++.++.|..-. ..+.+..+ |. ..-+-.++..||
T Consensus 120 DiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 199 (466)
T PRK00654 120 DIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYAD 199 (466)
T ss_pred ceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcC
Confidence 999999999999999998663 46899999997521 11111111 10 111223456677
Q ss_pred eEeecCHHHHHHHHHHHHhhhCccccccCceeeE--EECCeEEEEEEeccccCchHHHhhhCC-------c----hHHHH
Q 003042 249 LIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGL--DYFGRTVSIKILPVGIHMGQFESIMSL-------D----VTGQK 315 (854)
Q Consensus 249 ligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i--~~~gr~~~i~v~p~GId~~~~~~~~~~-------~----~~~~~ 315 (854)
.|---++.|++..... ..| . ++ .+..+..++.++|+|||.+.|.+.... + .....
T Consensus 200 ~vitvS~~~~~ei~~~---~~~------~---gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~ 267 (466)
T PRK00654 200 RVTTVSPTYAREITTP---EFG------Y---GLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAEN 267 (466)
T ss_pred cCeeeCHHHHHHhccc---cCC------c---ChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHH
Confidence 7666666666543210 000 0 00 001223468899999999988642110 0 01122
Q ss_pred HHHHHHHcC----CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHH
Q 003042 316 VKELKEKFD----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEE 391 (854)
Q Consensus 316 ~~~l~~~~~----~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~ 391 (854)
.+.+++++. +.++|++|||+++.||+..+++|+++++++ + +.|+++|.+ + ..+++++++++.+
T Consensus 268 k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG~g-----~--~~~~~~l~~l~~~ 334 (466)
T PRK00654 268 KRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLGTG-----D--PELEEAFRALAAR 334 (466)
T ss_pred HHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEecC-----c--HHHHHHHHHHHHH
Confidence 345666662 568999999999999999999999998754 3 447777742 1 1244555555554
Q ss_pred HhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEE
Q 003042 392 INLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVII 471 (854)
Q Consensus 392 In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV 471 (854)
.+. .++++.+. +.+....+|+.||+||+||.+||||++.+|||+| |.|+|
T Consensus 335 ~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~---------------------G~p~V 384 (466)
T PRK00654 335 YPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRY---------------------GTLPI 384 (466)
T ss_pred CCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHC---------------------CCCEE
Confidence 321 25555553 5566779999999999999999999999999999 45999
Q ss_pred EecCccccccC-C--------CceEeCCCCHHHHHHHHHHHhcC--CHHHHHHHHHHHhccccccChHHHHHHHHHHHHH
Q 003042 472 VSEFIGCSPSL-S--------GAIRVNPWNVDAVADAMDSALQM--ENQEKILRHEKHYKYISSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 472 ~Se~~G~~~~l-~--------~ai~vnP~d~~~~A~ai~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 540 (854)
+|..+|..+.+ + .|++|+|.|+++++++|.+++.. .++.++...++.. ...+++..-++++++-.++
T Consensus 385 ~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~ 462 (466)
T PRK00654 385 VRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRR 462 (466)
T ss_pred EeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHH
Confidence 99999999887 3 38999999999999999999863 2222222222222 2568999988888776665
Q ss_pred HH
Q 003042 541 AC 542 (854)
Q Consensus 541 ~~ 542 (854)
+.
T Consensus 463 ~~ 464 (466)
T PRK00654 463 LL 464 (466)
T ss_pred Hh
Confidence 43
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-22 Score=234.90 Aligned_cols=318 Identities=14% Similarity=0.165 Sum_probs=214.0
Q ss_pred hcHHHHHHHHHHHHHHHHHh-cCCCCCeEEEeCcccchHHHHHHhcc------CCCeEEEEecCCC-----CChhhhhcC
Q 003042 167 GEWQAYLSANKVFADKVMEV-INPDEDYVWIHDYHLMVLPSFLRKRF------HRVKVGFFLHSPF-----PSSEIYRTL 234 (854)
Q Consensus 167 ~~w~~Y~~vN~~fa~~i~~~-~~~~~D~vwihDyhl~llp~~lr~~~------~~~~i~~flH~pf-----P~~e~~~~l 234 (854)
+....|.-.++..++.+... ++| |+|++||+|-.++|.+++++. .++|+.++.|... |....-..+
T Consensus 119 d~~~rf~~f~~a~l~~~~~~~~~p--DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 119 GSAEKVIFFNVGVLETLQRLGWKP--DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCC--CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 44567777777777766542 356 999999999999999998764 4789999999742 211111113
Q ss_pred CCh------------HHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchH
Q 003042 235 PVR------------DEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQ 302 (854)
Q Consensus 235 p~r------------~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~ 302 (854)
|+. .-+-.++..||.|---++.|++.-.+....-.|++. . ...+..++.++|+|||++.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~-----~----l~~~~~kl~~I~NGID~~~ 267 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK-----V----LEERKMRLHGILNGIDTRQ 267 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH-----H----HHhcCCCeeEEeCCccccc
Confidence 321 112235677888877788777764320000001110 0 0113457889999999998
Q ss_pred HHhhhCCch------------HHHHHHHHHHHc-----CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEE
Q 003042 303 FESIMSLDV------------TGQKVKELKEKF-----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLV 365 (854)
Q Consensus 303 ~~~~~~~~~------------~~~~~~~l~~~~-----~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLv 365 (854)
|.+... +. .......+++++ +++++|++|||+++.||+..+++|+.++++. + +.|+
T Consensus 268 ~~p~~d-~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lv 340 (489)
T PRK14098 268 WNPSTD-KLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLV 340 (489)
T ss_pred cCCccc-ccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEE
Confidence 864321 10 011123445544 2567999999999999999999999998752 3 5588
Q ss_pred EEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeee
Q 003042 366 QITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVS 445 (854)
Q Consensus 366 qi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~ 445 (854)
++|.. + ..+++++++++.+. + ..+.+.+.++.+++..+|++||+||+||..||||++.+|||+|
T Consensus 341 ivG~G-----~--~~~~~~l~~l~~~~----~-----~~V~~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~ 404 (489)
T PRK14098 341 ICGSG-----D--KEYEKRFQDFAEEH----P-----EQVSVQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSY 404 (489)
T ss_pred EEeCC-----C--HHHHHHHHHHHHHC----C-----CCEEEEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhC
Confidence 88842 2 12445555555542 1 1233445688899999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCCCCCceEEEecCccccccCC-------CceEeCCCCHHHHHHHHHHHhcC--CHHHHHHHHH
Q 003042 446 RQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-------GAIRVNPWNVDAVADAMDSALQM--ENQEKILRHE 516 (854)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-------~ai~vnP~d~~~~A~ai~~aL~m--~~~er~~r~~ 516 (854)
|.|+|++..+|..+.+. .|++++|.|++++|++|.+++.+ .++..+...+
T Consensus 405 ---------------------G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~ 463 (489)
T PRK14098 405 ---------------------GTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVL 463 (489)
T ss_pred ---------------------CCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 45899999999887772 48999999999999999998743 2222222221
Q ss_pred HHhccccccChHHHHHHHHHHHHHH
Q 003042 517 KHYKYISSHDVAYWAKSIDQDLERA 541 (854)
Q Consensus 517 ~~~~~v~~~~~~~W~~~~l~~l~~~ 541 (854)
+. ..+.+++..-++++++-.+++
T Consensus 464 ~~--~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 464 EA--MERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred HH--hcCCCChHHHHHHHHHHHHHH
Confidence 11 235689999999887766654
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.8e-23 Score=213.13 Aligned_cols=194 Identities=27% Similarity=0.390 Sum_probs=147.1
Q ss_pred EEEEecCCCCCCCCCCC-CCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceE
Q 003042 587 LILLDYDGTVMPQTSED-KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWE 665 (854)
Q Consensus 587 lI~~DlDGTLl~~~~~~-~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~ 665 (854)
+|++|+||||++ .+ ..+++++.++|++| .+.|+.++++|||+...+..++..+ +.+++++||++|+.+++..|.
T Consensus 1 li~~D~DgTL~~---~~~~~~~~~~~~~l~~l-~~~g~~~~i~TGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~~~~ 75 (204)
T TIGR01484 1 LLFFDLDGTLLD---PNAHELSPETIEALERL-REAGVKVVLVTGRSLAEIKELLKQL-PLPLIAENGALIFYPGEILYI 75 (204)
T ss_pred CEEEeCcCCCcC---CCCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHhC-CCCEEECCCcEEEECCEEEEE
Confidence 589999999998 55 78999999999999 7788999999999999999998764 478999999999987766666
Q ss_pred Ecccccc-chHH---HHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcC-CCEEEE-Ec
Q 003042 666 ICSLTRD-FDWK---EIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLAN-EPVVVK-RG 739 (854)
Q Consensus 666 ~~~~~~~-~~~~---~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~-~~~~v~-~g 739 (854)
. +... ..+. +.+...+..+.+..++...+.+...+.+++.... .......++.+.++....+ ..+.+. ++
T Consensus 76 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 151 (204)
T TIGR01484 76 E--PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAE--LGQELDSKMRERLEKIGRNDLELEAIYVG 151 (204)
T ss_pred c--ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccc--hhhHHHHHHHHHHHhhccccCcEEEEEec
Confidence 4 1111 1122 1222234444556667777888888888887641 1111223344444433221 335565 79
Q ss_pred CeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 740 QHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 740 ~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
...+||+|++++|+.+++.+++++ |++++++++|||+.||++||+.++.+
T Consensus 152 ~~~~ev~p~~~~K~~~~~~~~~~~---~~~~~~~~~~GD~~nD~~~~~~~~~~ 201 (204)
T TIGR01484 152 KTDLEVLPAGVDKGSALQALLKEL---NGKRDEILAFGDSGNDEEMFEVAGLA 201 (204)
T ss_pred CCEEEEecCCCChHHHHHHHHHHh---CCCHHHEEEEcCCHHHHHHHHHcCCc
Confidence 999999999999999999999999 99999999999999999999999874
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-21 Score=221.08 Aligned_cols=286 Identities=17% Similarity=0.196 Sum_probs=206.8
Q ss_pred CeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhc---CCC--hHHHH--HHhhcCCeEeecCHHHHHHHHHH
Q 003042 192 DYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRT---LPV--RDEIL--KSLLNSDLIGFHTFDYARHFLSS 264 (854)
Q Consensus 192 D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~---lp~--r~eil--~~ll~~dligf~t~~~~~~Fl~~ 264 (854)
|+|++|++.-.+++.++++ ..++|+.+++|..++-...+.. .|. ...++ ..+-.+|.|.+.+...++.+...
T Consensus 103 Diih~h~~~~~~~~~~~~~-~~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~ 181 (405)
T TIGR03449 103 DLIHSHYWLSGQVGWLLRD-RWGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVRH 181 (405)
T ss_pred CeEEechHHHHHHHHHHHH-hcCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHHH
Confidence 9999998665555555554 4468899999975432111111 111 11222 13457899999998887776542
Q ss_pred HHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccccCCH
Q 003042 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGI 341 (854)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~~KGi 341 (854)
.+ ....++.++|+|||.+.|.+. + ....++++ .++++|+++||+.+.||+
T Consensus 182 ----~~---------------~~~~ki~vi~ngvd~~~~~~~---~-----~~~~~~~~~~~~~~~~i~~~G~l~~~K~~ 234 (405)
T TIGR03449 182 ----YD---------------ADPDRIDVVAPGADLERFRPG---D-----RATERARLGLPLDTKVVAFVGRIQPLKAP 234 (405)
T ss_pred ----cC---------------CChhhEEEECCCcCHHHcCCC---c-----HHHHHHhcCCCCCCcEEEEecCCCcccCH
Confidence 11 122467889999999887531 1 11233444 367899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCh-hHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHH
Q 003042 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSG-KDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (854)
Q Consensus 342 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~-~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly 420 (854)
..+++|++++++++|+. ++.|+++|.+. +++ +..++++ +++.+ .+..+.+.+.|.++.+++..+|
T Consensus 235 ~~li~a~~~l~~~~~~~--~~~l~ivG~~~-~~g~~~~~~l~----~~~~~-------~~l~~~v~~~g~~~~~~~~~~l 300 (405)
T TIGR03449 235 DVLLRAVAELLDRDPDR--NLRVIVVGGPS-GSGLATPDALI----ELAAE-------LGIADRVRFLPPRPPEELVHVY 300 (405)
T ss_pred HHHHHHHHHHHhhCCCc--ceEEEEEeCCC-CCcchHHHHHH----HHHHH-------cCCCceEEECCCCCHHHHHHHH
Confidence 99999999999998873 47788888654 223 3333343 34433 2344556677889999999999
Q ss_pred HhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHH
Q 003042 421 AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVA 497 (854)
Q Consensus 421 ~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A 497 (854)
+.||++++||..||||++++|||+| |.|+|+|..+|..+.+. .|++++|.|++++|
T Consensus 301 ~~ad~~v~ps~~E~~g~~~lEAma~---------------------G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la 359 (405)
T TIGR03449 301 RAADVVAVPSYNESFGLVAMEAQAC---------------------GTPVVAARVGGLPVAVADGETGLLVDGHDPADWA 359 (405)
T ss_pred HhCCEEEECCCCCCcChHHHHHHHc---------------------CCCEEEecCCCcHhhhccCCceEECCCCCHHHHH
Confidence 9999999999999999999999999 45999999988887773 37999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHHH
Q 003042 498 DAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541 (854)
Q Consensus 498 ~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 541 (854)
++|.++++.++ .+....+..++.+.++++...++++++-+.++
T Consensus 360 ~~i~~~l~~~~-~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 360 DALARLLDDPR-TRIRMGAAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHHhCHH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99999998654 44455555666777899999999888777654
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-21 Score=223.58 Aligned_cols=283 Identities=14% Similarity=0.142 Sum_probs=199.2
Q ss_pred HHhcCCCCCeEEEeCcccch-HHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHH-hhcCCeEeecCHHHHHHH
Q 003042 184 MEVINPDEDYVWIHDYHLMV-LPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKS-LLNSDLIGFHTFDYARHF 261 (854)
Q Consensus 184 ~~~~~~~~D~vwihDyhl~l-lp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~-ll~~dligf~t~~~~~~F 261 (854)
++..+| |+|++|+++-.+ ....+..+..++|+.+..|..|+..+... .....+.+- +-.+|.|.+.+....+.+
T Consensus 84 ~~~~~~--DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~--~~~~~~~~~~~~~~d~ii~~s~~~~~~~ 159 (398)
T cd03796 84 LIRERI--TIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASS--IHTNKLLRFSLADVDHVICVSHTSKENT 159 (398)
T ss_pred HHhcCC--CEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhh--HHhhHHHHHhhccCCEEEEecHhHhhHH
Confidence 334466 999999987543 33444445557899999998775332211 011222222 346788888777655544
Q ss_pred HHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCH
Q 003042 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGI 341 (854)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi 341 (854)
.... + ....++.++|+|+|.+.|.+... . ..+++++|+++||+.+.||+
T Consensus 160 ~~~~----~---------------~~~~k~~vi~ngvd~~~f~~~~~-----~-------~~~~~~~i~~~grl~~~Kg~ 208 (398)
T cd03796 160 VLRA----S---------------LDPERVSVIPNAVDSSDFTPDPS-----K-------RDNDKITIVVISRLVYRKGI 208 (398)
T ss_pred HHHh----C---------------CChhhEEEEcCccCHHHcCCCcc-----c-------CCCCceEEEEEeccchhcCH
Confidence 3210 1 12246778999999988753211 0 12467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHH
Q 003042 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (854)
Q Consensus 342 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~ 421 (854)
..+++|+..+.+++|+++ |+++|. ++..+++++. +++ .+....+.+.|.++.+++..+|+
T Consensus 209 ~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~l~~~----~~~-------~~l~~~v~~~G~~~~~~~~~~l~ 268 (398)
T cd03796 209 DLLVGIIPEICKKHPNVR----FIIGGD-----GPKRILLEEM----REK-------YNLQDRVELLGAVPHERVRDVLV 268 (398)
T ss_pred HHHHHHHHHHHhhCCCEE----EEEEeC-----CchHHHHHHH----HHH-------hCCCCeEEEeCCCCHHHHHHHHH
Confidence 999999999988888765 777773 3333344443 333 23344455667899999999999
Q ss_pred hCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-CC-ceEeCCCCHHHHHHH
Q 003042 422 IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SG-AIRVNPWNVDAVADA 499 (854)
Q Consensus 422 ~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~-ai~vnP~d~~~~A~a 499 (854)
.||++++||..||||++++|||+| |.|+|+|..+|..+.+ ++ +++++| |.++++++
T Consensus 269 ~ad~~v~pS~~E~~g~~~~EAma~---------------------G~PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~ 326 (398)
T cd03796 269 QGHIFLNTSLTEAFCIAIVEAASC---------------------GLLVVSTRVGGIPEVLPPDMILLAEP-DVESIVRK 326 (398)
T ss_pred hCCEEEeCChhhccCHHHHHHHHc---------------------CCCEEECCCCCchhheeCCceeecCC-CHHHHHHH
Confidence 999999999999999999999999 4599999999988877 33 444544 99999999
Q ss_pred HHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHHHHH
Q 003042 500 MDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERACR 543 (854)
Q Consensus 500 i~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~ 543 (854)
|.+++.++.+.+....+.......++++..-++++++..+++..
T Consensus 327 l~~~l~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 327 LEEAISILRTGKHDPWSFHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred HHHHHhChhhhhhHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 99999876555433333334455669999999999988877653
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.89 E-value=9e-22 Score=229.02 Aligned_cols=310 Identities=17% Similarity=0.206 Sum_probs=206.6
Q ss_pred HHHHHHHHHHHHHHHh-cCCCCCeEEEeCcccchHHHHHHhccC--CCeEEEEecCCCC----ChhhhhcCCCh------
Q 003042 171 AYLSANKVFADKVMEV-INPDEDYVWIHDYHLMVLPSFLRKRFH--RVKVGFFLHSPFP----SSEIYRTLPVR------ 237 (854)
Q Consensus 171 ~Y~~vN~~fa~~i~~~-~~~~~D~vwihDyhl~llp~~lr~~~~--~~~i~~flH~pfP----~~e~~~~lp~r------ 237 (854)
.+...++..++.+... .+| |+|++||+|-.++|.++++... ++|+.++.|...+ +.+.+..+...
T Consensus 110 r~~~f~~a~~~~~~~~~~~~--DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~ 187 (473)
T TIGR02095 110 RFAFFSRAAAELLSGLGWQP--DVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHM 187 (473)
T ss_pred HHHHHHHHHHHHHHhcCCCC--CEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCc
Confidence 3444445444444321 345 8999999999999999988765 3899999997642 12222221111
Q ss_pred --------HH-HHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEE--ECCeEEEEEEeccccCchHHHhh
Q 003042 238 --------DE-ILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLD--YFGRTVSIKILPVGIHMGQFESI 306 (854)
Q Consensus 238 --------~e-il~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~--~~gr~~~i~v~p~GId~~~~~~~ 306 (854)
-. +-.++..||.|-.-++.|++..... ..|. +++ ...+..++.++|+|||.+.|.+.
T Consensus 188 ~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~~---------~l~~~l~~~~~ki~~I~NGid~~~~~p~ 255 (473)
T TIGR02095 188 EGLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFGY---------GLDGVLKARSGKLRGILNGIDTEVWNPA 255 (473)
T ss_pred hhhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCCc---------cchhHHHhcCCCeEEEeCCCCccccCCC
Confidence 11 2235566777777777666654321 0000 000 01133478899999999988642
Q ss_pred hCCc-----------hHHHHHHHHHHHcC-----CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 003042 307 MSLD-----------VTGQKVKELKEKFD-----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNP 370 (854)
Q Consensus 307 ~~~~-----------~~~~~~~~l~~~~~-----~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p 370 (854)
.... ........++++++ ++++|++|||+.+.||+..+++|++++.++. +.|+++|..
T Consensus 256 ~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g 329 (473)
T TIGR02095 256 TDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTG 329 (473)
T ss_pred CCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCC
Confidence 1100 01122345666662 6789999999999999999999999987542 457877742
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCC
Q 003042 371 ARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSP 450 (854)
Q Consensus 371 ~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~ 450 (854)
+ .++++++++++.+ ++. .+.++. ..+.+++..+|+.||++++||..||||++.+|||+|
T Consensus 330 -----~--~~~~~~l~~~~~~----~~~----~v~~~~-~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~----- 388 (473)
T TIGR02095 330 -----D--PELEEALRELAER----YPG----NVRVII-GYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRY----- 388 (473)
T ss_pred -----C--HHHHHHHHHHHHH----CCC----cEEEEE-cCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHC-----
Confidence 1 2345556665543 221 144444 467888889999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCceEEEecCccccccCC---------CceEeCCCCHHHHHHHHHHHhcC---CHHHHHHHHHHH
Q 003042 451 VLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---------GAIRVNPWNVDAVADAMDSALQM---ENQEKILRHEKH 518 (854)
Q Consensus 451 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---------~ai~vnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~ 518 (854)
+.|+|+|..+|..+.+. .|++++|.|+++++++|.+++.+ .++.++...++.
T Consensus 389 ----------------G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~ 452 (473)
T TIGR02095 389 ----------------GTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNA 452 (473)
T ss_pred ----------------CCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 45999999999998882 37999999999999999999873 223333332222
Q ss_pred hccccccChHHHHHHHHHHHH
Q 003042 519 YKYISSHDVAYWAKSIDQDLE 539 (854)
Q Consensus 519 ~~~v~~~~~~~W~~~~l~~l~ 539 (854)
. .+.+++...++++++-.+
T Consensus 453 ~--~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 453 M--SQDFSWDKSAKQYVELYR 471 (473)
T ss_pred h--ccCCCcHHHHHHHHHHHH
Confidence 2 256899999888876554
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.1e-21 Score=223.83 Aligned_cols=297 Identities=17% Similarity=0.166 Sum_probs=193.3
Q ss_pred cCCCCCeEEEeCcccchHHHHHHhc-cCCCeEEEEecCC-----CCChhhhhc--CCCh-------------HHHHHHhh
Q 003042 187 INPDEDYVWIHDYHLMVLPSFLRKR-FHRVKVGFFLHSP-----FPSSEIYRT--LPVR-------------DEILKSLL 245 (854)
Q Consensus 187 ~~~~~D~vwihDyhl~llp~~lr~~-~~~~~i~~flH~p-----fP~~e~~~~--lp~r-------------~eil~~ll 245 (854)
++| |+|++||+|--++|.+|+.+ ..++++.++.|.. ||. ..+.. +|.. .-+-.++.
T Consensus 132 ~~p--DIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~ 208 (485)
T PRK14099 132 FVP--DIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ 208 (485)
T ss_pred CCC--CEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHH
Confidence 456 99999999999999999753 3467899999964 322 11111 1110 01233455
Q ss_pred cCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCC-------ch----HHH
Q 003042 246 NSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSL-------DV----TGQ 314 (854)
Q Consensus 246 ~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~-------~~----~~~ 314 (854)
.||.|---++.|++...+.- .-.|++. .+..+..++.++|+|||++.|.+.... .+ ...
T Consensus 209 ~ad~vitVS~~~a~ei~~~~-~g~gl~~---------~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~ 278 (485)
T PRK14099 209 LADRITTVSPTYALEIQGPE-AGMGLDG---------LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAA 278 (485)
T ss_pred hcCeeeecChhHHHHHhccc-CCcChHH---------HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHH
Confidence 66666655666655432200 0000000 001123468899999999988643210 00 011
Q ss_pred HHHHHHHHcC-----CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHH
Q 003042 315 KVKELKEKFD-----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIA 389 (854)
Q Consensus 315 ~~~~l~~~~~-----~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v 389 (854)
....++++++ +..+|++|||+++.||+..+++|+.+++++ + +.|+++|. |+ .++++++++++
T Consensus 279 ~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~-----G~--~~~~~~l~~l~ 345 (485)
T PRK14099 279 NKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGS-----GD--AELEARFRAAA 345 (485)
T ss_pred hHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEec-----CC--HHHHHHHHHHH
Confidence 1234566652 356888999999999999999999998753 2 44777774 22 23445555555
Q ss_pred HHHhhccCCCCCccEEEEcCCCChhhHHHHH-HhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCc
Q 003042 390 EEINLNFGKPGYEPIVIIKEPLSTQDKVPYY-AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKS 468 (854)
Q Consensus 390 ~~In~~~~~~~~~pv~~~~~~~~~~el~aly-~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g 468 (854)
.+ ++ ..++++.|. .+++..+| +.||+||+||.+||||++.+|||+| |.
T Consensus 346 ~~----~~----~~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~---------------------G~ 394 (485)
T PRK14099 346 QA----YP----GQIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRY---------------------GA 394 (485)
T ss_pred HH----CC----CCEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHC---------------------CC
Confidence 43 21 124455554 67888877 5799999999999999999999999 44
Q ss_pred eEEEecCccccccC-C-----------CceEeCCCCHHHHHHHHHHHh---cCCHHHHHHHHHHHhccccccChHHHHHH
Q 003042 469 VIIVSEFIGCSPSL-S-----------GAIRVNPWNVDAVADAMDSAL---QMENQEKILRHEKHYKYISSHDVAYWAKS 533 (854)
Q Consensus 469 ~lV~Se~~G~~~~l-~-----------~ai~vnP~d~~~~A~ai~~aL---~m~~~er~~r~~~~~~~v~~~~~~~W~~~ 533 (854)
|+|+|..+|..+.+ + .|++|+|.|+++++++|.+++ +.++ .++...++.+ ...+++..-+++
T Consensus 395 ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~-~~~~l~~~~~--~~~fSw~~~a~~ 471 (485)
T PRK14099 395 VPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPV-AWRRLQRNGM--TTDVSWRNPAQH 471 (485)
T ss_pred CcEEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHH-HHHHHHHHhh--hhcCChHHHHHH
Confidence 88889999988876 2 489999999999999999854 3333 3333333222 367899999999
Q ss_pred HHHHHHHHHH
Q 003042 534 IDQDLERACR 543 (854)
Q Consensus 534 ~l~~l~~~~~ 543 (854)
+++-.+++.+
T Consensus 472 y~~lY~~l~~ 481 (485)
T PRK14099 472 YAALYRSLVA 481 (485)
T ss_pred HHHHHHHHHh
Confidence 8887776654
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.1e-22 Score=224.15 Aligned_cols=301 Identities=13% Similarity=0.120 Sum_probs=202.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCC--Chhh-hh-cCCCh--------
Q 003042 170 QAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFP--SSEI-YR-TLPVR-------- 237 (854)
Q Consensus 170 ~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP--~~e~-~~-~lp~r-------- 237 (854)
.....+-+.......+.++| |+|+.| +.+....+|++.+|++++..++|..+= ..+. |. ..+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~p--dvi~~h--~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (396)
T cd03818 69 LRGQAVARALLALRAKGFRP--DVIVAH--PGWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLR 144 (396)
T ss_pred HHHHHHHHHHHHHHhcCCCC--CEEEEC--CccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHH
Confidence 33344434333333444567 899999 677777889999999999888764331 1111 11 11111
Q ss_pred HH---HHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHH
Q 003042 238 DE---ILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQ 314 (854)
Q Consensus 238 ~e---il~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~ 314 (854)
.. +...+-.+|.|-..+......|... + ..++.++|+|||.+.|.+... .
T Consensus 145 ~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~-------------------~---~~ki~vI~ngvd~~~f~~~~~---~-- 197 (396)
T cd03818 145 NRNALILLALAQADAGVSPTRWQRSTFPAE-------------------L---RSRISVIHDGIDTDRLRPDPQ---A-- 197 (396)
T ss_pred HhhhHhHHHHHhCCEEECCCHHHHhhCcHh-------------------h---ccceEEeCCCccccccCCCch---h--
Confidence 11 2345667788777665444433210 1 136788999999988863211 1
Q ss_pred HHHHHHHH---cCCCEEEEEecC-ccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCh--hH-HHHHHHHHHH
Q 003042 315 KVKELKEK---FDGKIVILGVDD-MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSG--KD-VQDLLSDTNR 387 (854)
Q Consensus 315 ~~~~l~~~---~~~~~iil~VdR-ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~--~~-~~~l~~~v~~ 387 (854)
...++.. ..++++|+++|| +.+.||+..+++|+.++.+++|+++ |+++|......+ ++ ...+++ +
T Consensus 198 -~~~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~---~ 269 (396)
T cd03818 198 -RLRLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQ---H 269 (396)
T ss_pred -hhcccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHH---H
Confidence 1111111 146789999998 9999999999999999999998876 888885321111 00 011121 2
Q ss_pred HHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCC
Q 003042 388 IAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKK 467 (854)
Q Consensus 388 ~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~ 467 (854)
+.++++.+.+ . +.+.|.|.++.+++.++|+.||++|+||..||+|++++||||| |
T Consensus 270 ~~~~~~~~~~---~-~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~---------------------G 324 (396)
T cd03818 270 MLDELGGRLD---L-SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMAC---------------------G 324 (396)
T ss_pred HHHHhhcccC---c-ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHC---------------------C
Confidence 2222222221 1 2455677899999999999999999999999999999999999 4
Q ss_pred ceEEEecCccccccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccc-cChHHHHHHHH
Q 003042 468 SVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSID 535 (854)
Q Consensus 468 g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l 535 (854)
.|+|+|+.+|..+.+. .|++++|.|++++|++|.+++++++ ++....++.++++.+ +++...+++++
T Consensus 325 ~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~~-~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 325 CLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDDPA-RRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 5999999998888883 4899999999999999999998764 455556666777765 88777777665
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-21 Score=222.61 Aligned_cols=272 Identities=16% Similarity=0.143 Sum_probs=197.4
Q ss_pred CeEEEeCcccchHHHHHHhc-cCCCeEEEEecCCCCChhhhhc--CC-ChHHHHHHhhcCCeEeecCHHHHHHHHHHHHh
Q 003042 192 DYVWIHDYHLMVLPSFLRKR-FHRVKVGFFLHSPFPSSEIYRT--LP-VRDEILKSLLNSDLIGFHTFDYARHFLSSCSR 267 (854)
Q Consensus 192 D~vwihDyhl~llp~~lr~~-~~~~~i~~flH~pfP~~e~~~~--lp-~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r 267 (854)
|+|+.|.-+.-.+..++++. ....++.+++|-+ ++++. .. .+..+-+-+-.+|.|-..+....+.+.+
T Consensus 120 diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~----d~~~~~~~~~~~~~~~~~~~~ad~vv~~S~~~~~~l~~---- 191 (406)
T PRK15427 120 DVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGI----DISSREVLNHYTPEYQQLFRRGDLMLPISDLWAGRLQK---- 191 (406)
T ss_pred CEEEEcCChHHHHHHHHHHhCCCCCCeEEEEccc----ccccchhhhhhhHHHHHHHHhCCEEEECCHHHHHHHHH----
Confidence 89999988776677777763 2244667788853 22211 01 1112233344688887776644443321
Q ss_pred hhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHH
Q 003042 268 MLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLA 347 (854)
Q Consensus 268 ~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A 347 (854)
+|. ...++.++|+|||.+.|..... ....++..|++|||+.+.||+..+++|
T Consensus 192 -~g~---------------~~~ki~vi~nGvd~~~f~~~~~------------~~~~~~~~il~vGrl~~~Kg~~~ll~a 243 (406)
T PRK15427 192 -MGC---------------PPEKIAVSRMGVDMTRFSPRPV------------KAPATPLEIISVARLTEKKGLHVAIEA 243 (406)
T ss_pred -cCC---------------CHHHEEEcCCCCCHHHcCCCcc------------ccCCCCeEEEEEeCcchhcCHHHHHHH
Confidence 121 1235678999999988852110 011345679999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEE
Q 003042 348 MGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCV 427 (854)
Q Consensus 348 ~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~v 427 (854)
++.+.+++|+++ |+++| +|+..++++ +++.+ .+....+.+.|.++.+|+..+|+.||+||
T Consensus 244 ~~~l~~~~~~~~----l~ivG-----~G~~~~~l~----~~~~~-------~~l~~~V~~~G~~~~~el~~~l~~aDv~v 303 (406)
T PRK15427 244 CRQLKEQGVAFR----YRILG-----IGPWERRLR----TLIEQ-------YQLEDVVEMPGFKPSHEVKAMLDDADVFL 303 (406)
T ss_pred HHHHHhhCCCEE----EEEEE-----CchhHHHHH----HHHHH-------cCCCCeEEEeCCCCHHHHHHHHHhCCEEE
Confidence 999988888654 77777 344433444 44444 34456778889999999999999999999
Q ss_pred EccCc------cCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHHH
Q 003042 428 VNCVR------DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVAD 498 (854)
Q Consensus 428 v~S~~------EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ 498 (854)
+||.. ||+|++.+|||+| |.|+|+|..+|+.+.+. +|++++|.|++++|+
T Consensus 304 ~pS~~~~~g~~Eg~p~~llEAma~---------------------G~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ 362 (406)
T PRK15427 304 LPSVTGADGDMEGIPVALMEAMAV---------------------GIPVVSTLHSGIPELVEADKSGWLVPENDAQALAQ 362 (406)
T ss_pred ECCccCCCCCccCccHHHHHHHhC---------------------CCCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHH
Confidence 99984 9999999999999 45999999999888883 489999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHhccc-cccChHHHHHHHHHHHHH
Q 003042 499 AMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 499 ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 540 (854)
+|.+++++++++++...++.++++ .++++...++++.+-+++
T Consensus 363 ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 363 RLAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999966666666677777776 558999999888776653
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.6e-22 Score=210.05 Aligned_cols=210 Identities=19% Similarity=0.242 Sum_probs=141.4
Q ss_pred EEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECCC--cce
Q 003042 588 ILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKN--SAW 664 (854)
Q Consensus 588 I~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~~--~~~ 664 (854)
|++|+||||++ +.+.+++++.++|+++ ++.|+.+++||||++..+..++..+. ..+++++||+.|+..+. ..|
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~ 76 (225)
T TIGR01482 1 IASDIDGTLTD---PNRAINESALEAIRKA-ESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIF 76 (225)
T ss_pred CeEeccCccCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEE
Confidence 68999999999 7788999999999999 89999999999999999988876664 45789999999988653 344
Q ss_pred EEccccccchHHHHH-HHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeEE
Q 003042 665 EICSLTRDFDWKEIA-EPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIV 743 (854)
Q Consensus 665 ~~~~~~~~~~~~~~v-~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~v 743 (854)
...+. ..|.... ......+..... .+ . ............+ . +....+.+.+... ..+.++...+
T Consensus 77 ~~~~~---~~~~~~~~~~~~~~~~~~~~-~~-~-~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~-~~~~~~~~~~ 141 (225)
T TIGR01482 77 LAYLE---EEWFLDIVIAKTFPFSRLKV-QY-P-RRASLVKMRYGID-------V-DTVREIIKELGLN-LVAVDSGFDI 141 (225)
T ss_pred ecccC---HHHHHHHHHhcccchhhhcc-cc-c-cccceEEEeecCC-------H-HHHHHHHHhcCce-EEEecCCcEE
Confidence 43322 1222111 111000000000 00 0 0000101000001 1 1112222222221 2233556799
Q ss_pred EEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceE
Q 003042 744 EVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYY 819 (854)
Q Consensus 744 EI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~ 819 (854)
||+|++++||.+++++++++ |++++++++|||+.||++||+.+|. +|+||++ +..|+|+
T Consensus 142 ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~--------------~vam~Na~~~~k~~A~~v 204 (225)
T TIGR01482 142 HILPQGVNKGVAVKKLKEKL---GIKPGETLVCGDSENDIDLFEVPGF--------------GVAVANAQPELKEWADYV 204 (225)
T ss_pred EEeeCCCCHHHHHHHHHHHh---CCCHHHEEEECCCHhhHHHHHhcCc--------------eEEcCChhHHHHHhcCee
Confidence 99999999999999999999 9999999999999999999999986 5777775 5789998
Q ss_pred eC--CHhH----HHHHHHHH
Q 003042 820 LD--DTAE----VINLLEGL 833 (854)
Q Consensus 820 l~--~~~e----V~~~L~~l 833 (854)
+. +.++ |.+.|+++
T Consensus 205 t~~~~~~G~~~~v~~~l~~~ 224 (225)
T TIGR01482 205 TESPYGEGGAEAIGEILQAI 224 (225)
T ss_pred cCCCCCCcHHHHHHHHHHhh
Confidence 85 3556 88887764
|
catalyze the same reaction as SPP. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.8e-22 Score=211.74 Aligned_cols=216 Identities=20% Similarity=0.309 Sum_probs=143.4
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECC-Ccce
Q 003042 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSK-NSAW 664 (854)
Q Consensus 587 lI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~-~~~~ 664 (854)
+|++||||||++ .++.+++++.++|+++ ++.|+.+++||||+...+..++..+. ..++++.||+.|...+ ...+
T Consensus 1 li~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~ 76 (256)
T TIGR00099 1 LIFIDLDGTLLN---DDHTISPSTKEALAKL-REKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILY 76 (256)
T ss_pred CEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEe
Confidence 589999999999 7788999999999999 89999999999999999998887664 3478999999998764 3344
Q ss_pred EEccccccchHHHHHHHHHHHHhc--------cCCcceEecccce-EE----Eee------ccC---CCc-cc-------
Q 003042 665 EICSLTRDFDWKEIAEPVMKLYTE--------TTDGSFIEDKETA-IV----WHH------QHA---DPH-FG------- 714 (854)
Q Consensus 665 ~~~~~~~~~~~~~~v~~~~~~y~~--------~~~g~~ie~k~~~-l~----~~~------~~~---d~~-~~------- 714 (854)
...++.. .++++++...+ ...+.++...... +. ..+ ... ..+ ..
T Consensus 77 ~~~i~~~------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
T TIGR00099 77 KKPLDLD------LVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLD 150 (256)
T ss_pred ecCCCHH------HHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECC
Confidence 4443322 12222221111 1112222111000 00 000 000 000 00
Q ss_pred hhhHHHHHHHHHH-HhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhc
Q 003042 715 SCQAKELLDHLEN-VLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAV 793 (854)
Q Consensus 715 ~~~~~el~~~l~~-~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~ 793 (854)
.....++.+.+.+ .+......+.++..++||+|+++|||.|++.+++++ |++++++++|||+.||++||+.++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~---~~~~~~~~~~GD~~nD~~m~~~~~~-- 225 (256)
T TIGR00099 151 PEDLDLLIEALNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEAL---GISLEDVIAFGDGMNDIEMLEAAGY-- 225 (256)
T ss_pred HHHHHHHHHHhhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHc---CCCHHHEEEeCCcHHhHHHHHhCCc--
Confidence 0112223333331 122223345677889999999999999999999999 9999999999999999999999986
Q ss_pred CCCCCCCCccEEEEEecCC----CcccceEeCC--HhHHHHH
Q 003042 794 ADPSVPGIAEVFACTVGQK----PSMAKYYLDD--TAEVINL 829 (854)
Q Consensus 794 ~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~--~~eV~~~ 829 (854)
+|+||++ +..|+|++.+ .++|.++
T Consensus 226 ------------~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 226 ------------GVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ------------eeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 5677764 4678898864 4556654
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.6e-22 Score=204.82 Aligned_cols=206 Identities=17% Similarity=0.260 Sum_probs=139.0
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECCCcc
Q 003042 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKNSA 663 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~~~~ 663 (854)
+|+|++|+||||++ .++.+++.+.++|++| +++|+.|+++|||++..+..++..++ ..+++++||+.|+..+...
T Consensus 1 ik~v~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~ 76 (215)
T TIGR01487 1 IKLVAIDIDGTLTE---PNRMISERAIEAIRKA-EKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDI 76 (215)
T ss_pred CcEEEEecCCCcCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcE
Confidence 48999999999999 7888999999999999 89999999999999999999886664 3368999999999865432
Q ss_pred eEEccccccchHH-HHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeE
Q 003042 664 WEICSLTRDFDWK-EIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHI 742 (854)
Q Consensus 664 ~~~~~~~~~~~~~-~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~ 742 (854)
... . ....+. ...... .+....... ........+. ... .....+...+ ......+..+...
T Consensus 77 ~~~--~-~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~---~~~----~~~~~~~~~l----~~~~~~~~~~~~~ 138 (215)
T TIGR01487 77 FLA--N-MEEEWFLDEEKKK--RFPRDRLSN--EYPRASLVIM---REG----KDVDEVREII----KERGLNLVDSGFA 138 (215)
T ss_pred EEe--c-ccchhhHHHhhhh--hhhhhhccc--ccceeEEEEe---cCC----ccHHHHHHHH----HhCCeEEEecCce
Confidence 111 1 111111 000000 010000000 0000001110 000 0112222222 2233444455678
Q ss_pred EEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----Ccccce
Q 003042 743 VEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKY 818 (854)
Q Consensus 743 vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y 818 (854)
+||.|.+++||.+++++++++ |++++++++|||+.||++||+.+|. +|+||+. +..|+|
T Consensus 139 ~ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~iGDs~ND~~ml~~ag~--------------~vam~na~~~~k~~A~~ 201 (215)
T TIGR01487 139 IHIMKKGVDKGVGVEKLKELL---GIKPEEVAAIGDSENDIDLFRVVGF--------------KVAVANADDQLKEIADY 201 (215)
T ss_pred EEEecCCCChHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHhCCC--------------eEEcCCccHHHHHhCCE
Confidence 999999999999999999999 9999999999999999999999986 5777765 578899
Q ss_pred EeC--CHhHHHHH
Q 003042 819 YLD--DTAEVINL 829 (854)
Q Consensus 819 ~l~--~~~eV~~~ 829 (854)
++. +.++|.++
T Consensus 202 v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 202 VTSNPYGEGVVEV 214 (215)
T ss_pred EcCCCCCchhhhh
Confidence 885 34556654
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.9e-21 Score=222.29 Aligned_cols=283 Identities=14% Similarity=0.186 Sum_probs=198.2
Q ss_pred HHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCCh----HHHHHHh-hcCCeEeecCHHHH
Q 003042 184 MEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR----DEILKSL-LNSDLIGFHTFDYA 258 (854)
Q Consensus 184 ~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r----~eil~~l-l~~dligf~t~~~~ 258 (854)
++..+| |+|++|+...+.++.++-.+..++|+.+.+|.-+|...-....++. ..+.+.+ -.+|.|...+....
T Consensus 140 i~~~kp--DiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~ 217 (465)
T PLN02871 140 VARFKP--DLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALG 217 (465)
T ss_pred HHhCCC--CEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHH
Confidence 344566 8999998777666666544455788999999766532110011110 0112222 35788888777666
Q ss_pred HHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc----CCCEEEEEecC
Q 003042 259 RHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF----DGKIVILGVDD 334 (854)
Q Consensus 259 ~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~----~~~~iil~VdR 334 (854)
+.+... +. ....++.++|+|||.+.|.+.... ..+++++ +++++|+++||
T Consensus 218 ~~l~~~-----~~--------------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vGr 271 (465)
T PLN02871 218 KELEAA-----GV--------------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVGR 271 (465)
T ss_pred HHHHHc-----CC--------------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeCC
Confidence 655431 10 112367789999999888532211 1223332 36789999999
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChh
Q 003042 335 MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQ 414 (854)
Q Consensus 335 ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~ 414 (854)
+.+.||+..+++|++++ |++ .|+++| +|+..++ +++++.. . +| .|.|.++.+
T Consensus 272 l~~~K~~~~li~a~~~~----~~~----~l~ivG-----~G~~~~~----l~~~~~~-------~---~V-~f~G~v~~~ 323 (465)
T PLN02871 272 LGAEKNLDFLKRVMERL----PGA----RLAFVG-----DGPYREE----LEKMFAG-------T---PT-VFTGMLQGD 323 (465)
T ss_pred CchhhhHHHHHHHHHhC----CCc----EEEEEe-----CChHHHH----HHHHhcc-------C---Ce-EEeccCCHH
Confidence 99999999999888654 554 488777 3444333 3333321 1 24 466789999
Q ss_pred hHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC------CceEe
Q 003042 415 DKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS------GAIRV 488 (854)
Q Consensus 415 el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------~ai~v 488 (854)
|+..+|+.||+||+||..||||++++|||+| |.|+|+|..+|+.+.+. +|+++
T Consensus 324 ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~---------------------G~PVI~s~~gg~~eiv~~~~~~~~G~lv 382 (465)
T PLN02871 324 ELSQAYASGDVFVMPSESETLGFVVLEAMAS---------------------GVPVVAARAGGIPDIIPPDQEGKTGFLY 382 (465)
T ss_pred HHHHHHHHCCEEEECCcccccCcHHHHHHHc---------------------CCCEEEcCCCCcHhhhhcCCCCCceEEe
Confidence 9999999999999999999999999999999 45999999999887763 28999
Q ss_pred CCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHH-HHHHHHh
Q 003042 489 NPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQD-LERACRD 544 (854)
Q Consensus 489 nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~-l~~~~~~ 544 (854)
+|.|++++|++|.++++.+ +.++...+..++++.++++...++++++. ..++...
T Consensus 383 ~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 383 TPGDVDDCVEKLETLLADP-ELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred CCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999855 45555666777788889999999999984 5555444
|
|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-20 Score=210.73 Aligned_cols=207 Identities=14% Similarity=0.151 Sum_probs=157.9
Q ss_pred EEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc--CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 003042 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (854)
Q Consensus 289 ~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 366 (854)
.++.++|+|||.+.|.+... . .....++.+ .++.+|+++||+++.||+..+++|+..+++++|+...++.|++
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~---~--~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i 234 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRG---D--RSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVI 234 (374)
T ss_pred hhEEEeccCccccccCCCcc---c--hhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEE
Confidence 45678999999987753211 1 111112222 4678999999999999999999999999999987666788998
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeee
Q 003042 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (854)
Q Consensus 367 i~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~ 446 (854)
+|. |+..+++++ .+.+ .+....+++.|. .+|+..+|+.||++|+||..||||++++|||+|
T Consensus 235 ~G~-----g~~~~~~~~----~~~~-------~~~~~~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~- 295 (374)
T TIGR03088 235 VGD-----GPARGACEQ----MVRA-------AGLAHLVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMAS- 295 (374)
T ss_pred ecC-----CchHHHHHH----HHHH-------cCCcceEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHc-
Confidence 883 333333433 3333 334456777764 678999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccc-
Q 003042 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI- 522 (854)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v- 522 (854)
|.|+|+|+.+|..+.+. .|++++|.|++++|++|.++++.++ .+....++.++++
T Consensus 296 --------------------G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~-~~~~~~~~a~~~~~ 354 (374)
T TIGR03088 296 --------------------GLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPA-ARRAHGAAGRARAE 354 (374)
T ss_pred --------------------CCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHH
Confidence 45999999999888883 3899999999999999999988654 4455555666666
Q ss_pred cccChHHHHHHHHHHHHH
Q 003042 523 SSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 523 ~~~~~~~W~~~~l~~l~~ 540 (854)
..+++...++++.+...+
T Consensus 355 ~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 355 QQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred HhCCHHHHHHHHHHHHHH
Confidence 579999998888776654
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-20 Score=200.21 Aligned_cols=199 Identities=17% Similarity=0.208 Sum_probs=129.4
Q ss_pred hcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCC--cc-cceeecCcEEEEE
Q 003042 582 KTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV--EK-LGLSAEHGYFTRW 658 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~--~~-l~liaenG~~I~~ 658 (854)
.|++|+|++||||||++ +++.+++.++++|+++ +++|+.|+|||||++..+.+.++.. .. ..+++.||+.|+.
T Consensus 2 ~~~~klia~DlDGTLL~---~~~~is~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~ 77 (247)
T PTZ00174 2 EMKKTILLFDVDGTLTK---PRNPITQEMKDTLAKL-KSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYK 77 (247)
T ss_pred CCCCeEEEEECcCCCcC---CCCCCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEE
Confidence 57899999999999999 8899999999999999 8999999999999999998887532 12 2568999999997
Q ss_pred CCCcceEEcccc-ccch-HHHHHHHHHH----HHhccCCcceEecccceEEEeec-cCC-----Ccc---c--hhhHHHH
Q 003042 659 SKNSAWEICSLT-RDFD-WKEIAEPVMK----LYTETTDGSFIEDKETAIVWHHQ-HAD-----PHF---G--SCQAKEL 721 (854)
Q Consensus 659 ~~~~~~~~~~~~-~~~~-~~~~v~~~~~----~y~~~~~g~~ie~k~~~l~~~~~-~~d-----~~~---~--~~~~~el 721 (854)
.+...+...+.. .+.+ ..+.+....+ .......+.+.+.........+. ... ..+ . .....++
T Consensus 78 ~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (247)
T PTZ00174 78 DGELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKF 157 (247)
T ss_pred CCeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHH
Confidence 655444443321 1112 1222221111 11111223443322111111110 000 000 0 0112345
Q ss_pred HHHHHHHhcCCCEEEEE-cCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeC----CcccHHHHHHhhh
Q 003042 722 LDHLENVLANEPVVVKR-GQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGD----DRSDEDMFESIEQ 791 (854)
Q Consensus 722 ~~~l~~~l~~~~~~v~~-g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD----s~ND~~Mf~~ag~ 791 (854)
.+.+.+.+.+....... +..++||+|+|+|||.|++.|+++ ++++++||| +.||++||+.++.
T Consensus 158 ~~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~-------~~eviafGD~~~~~~NDieMl~~~~~ 225 (247)
T PTZ00174 158 IQDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND-------FKEIHFFGDKTFEGGNDYEIYNDPRT 225 (247)
T ss_pred HHHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh-------hhhEEEEcccCCCCCCcHhhhhcCCC
Confidence 55555555433333333 457999999999999999999986 489999999 8999999998765
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.1e-20 Score=209.91 Aligned_cols=285 Identities=14% Similarity=0.101 Sum_probs=198.2
Q ss_pred CCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhh-----hcCCChHHH-HHHhhcCCeEeecCHHHHHHHHHH
Q 003042 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIY-----RTLPVRDEI-LKSLLNSDLIGFHTFDYARHFLSS 264 (854)
Q Consensus 191 ~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~-----~~lp~r~ei-l~~ll~~dligf~t~~~~~~Fl~~ 264 (854)
-|+|++|++...+.+.++ ++..++|+.+.+|..+|..... ........+ ...+..+|.|-..+....+.+.+.
T Consensus 84 ~divh~~~~~~~~~~~~~-~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 162 (388)
T TIGR02149 84 ADVVHSHTWYTFLAGHLA-KKLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILKY 162 (388)
T ss_pred CCeEeecchhhhhHHHHH-HHhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHHH
Confidence 389999998776555544 4456789999999876532110 000111111 223456788888777666655431
Q ss_pred HHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccccCCH
Q 003042 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGI 341 (854)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~~KGi 341 (854)
. -+ -...++.++|+|+|...+.+. . ...+++++ .++++|+++||+.+.||+
T Consensus 163 ~---~~---------------~~~~~i~vi~ng~~~~~~~~~----~----~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~ 216 (388)
T TIGR02149 163 Y---PD---------------LDPEKVHVIYNGIDTKEYKPD----D----GNVVLDRYGIDRSRPYILFVGRITRQKGV 216 (388)
T ss_pred c---CC---------------CCcceEEEecCCCChhhcCCC----c----hHHHHHHhCCCCCceEEEEEcccccccCH
Confidence 0 01 112467789999998877521 1 12233443 467799999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHH
Q 003042 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (854)
Q Consensus 342 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~ 421 (854)
..+++|++++. +++ .|+.+|.. ++..++.+++++.+...+... ..++++.+.++.+++..+|+
T Consensus 217 ~~li~a~~~l~---~~~----~l~i~g~g-----~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 217 PHLLDAVHYIP---KDV----QVVLCAGA-----PDTPEVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLS 279 (388)
T ss_pred HHHHHHHHHHh---hcC----cEEEEeCC-----CCcHHHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHH
Confidence 99999998873 333 36655532 122344555555555543222 23777888899999999999
Q ss_pred hCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCH-----
Q 003042 422 IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNV----- 493 (854)
Q Consensus 422 ~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~----- 493 (854)
.||++|+||..||||++++|||+| |.|+|+|..+|..+.+. .|++++|.|.
T Consensus 280 ~aDv~v~ps~~e~~g~~~lEA~a~---------------------G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~ 338 (388)
T TIGR02149 280 NAEVFVCPSIYEPLGIVNLEAMAC---------------------GTPVVASATGGIPEVVVDGETGFLVPPDNSDADGF 338 (388)
T ss_pred hCCEEEeCCccCCCChHHHHHHHc---------------------CCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccch
Confidence 999999999999999999999999 45999999999888773 3899999998
Q ss_pred -HHHHHHHHHHhcCCHHHHHHHHHHHhccc-cccChHHHHHHHHHHHHHH
Q 003042 494 -DAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLERA 541 (854)
Q Consensus 494 -~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~ 541 (854)
++++++|.++++.++ +++...+..++++ .++++..+++++++.++++
T Consensus 339 ~~~l~~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 339 QAELAKAINILLADPE-LAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 999999999988654 4444444555544 6699999999998877653
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-20 Score=218.20 Aligned_cols=310 Identities=18% Similarity=0.189 Sum_probs=206.5
Q ss_pred HHHHHHHHHHHHHHHHh-cCCCCCeEEEeCcccchHHHHHHhcc-----CCCeEEEEecCCCCC----hhhhhc--CCC-
Q 003042 170 QAYLSANKVFADKVMEV-INPDEDYVWIHDYHLMVLPSFLRKRF-----HRVKVGFFLHSPFPS----SEIYRT--LPV- 236 (854)
Q Consensus 170 ~~Y~~vN~~fa~~i~~~-~~~~~D~vwihDyhl~llp~~lr~~~-----~~~~i~~flH~pfP~----~e~~~~--lp~- 236 (854)
..|...++...+.+... .+| |+|++||+|-.++|.++++.. .++|+.|+.|.+.+. ...+.. +++
T Consensus 110 ~~~~~f~~~~~~~l~~~~~~p--DviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~ 187 (476)
T cd03791 110 ERFALFSRAALELLRRLGWKP--DIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWE 187 (476)
T ss_pred HHHHHHHHHHHHHHHhcCCCC--cEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCcc
Confidence 34444555555544432 345 999999999999999998774 578999999987532 111111 111
Q ss_pred -------------hHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEE--ECCeEEEEEEeccccCch
Q 003042 237 -------------RDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLD--YFGRTVSIKILPVGIHMG 301 (854)
Q Consensus 237 -------------r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~--~~gr~~~i~v~p~GId~~ 301 (854)
..-+-.++..||.|-.-+..|++..++.- .|. +++ ...+..++.++|+|||.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~-----------~~~-gl~~~~~~~~~ki~~I~NGid~~ 255 (476)
T cd03791 188 ELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE-----------FGE-GLDGLLRARAGKLSGILNGIDYD 255 (476)
T ss_pred chhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC-----------CCc-chHHHHHhccCCeEEEeCCCcCc
Confidence 11223345667777777776666543210 000 000 012235788999999999
Q ss_pred HHHhhhCCc-----------hHHHHHHHHHHHc-----CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEE
Q 003042 302 QFESIMSLD-----------VTGQKVKELKEKF-----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLV 365 (854)
Q Consensus 302 ~~~~~~~~~-----------~~~~~~~~l~~~~-----~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLv 365 (854)
.|.+..... ........+++++ .++++|+++||+.+.||+..+++|++++.++. +.|+
T Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lv 329 (476)
T cd03791 256 VWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLV 329 (476)
T ss_pred ccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEE
Confidence 886432110 0112234456665 46789999999999999999999999987653 4477
Q ss_pred EEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeee
Q 003042 366 QITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVS 445 (854)
Q Consensus 366 qi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~ 445 (854)
++|.. + .++.+++.+++.+. ...++++.+ .+.+++..+|+.||++++||..||||++.+|||+|
T Consensus 330 i~G~g---~----~~~~~~~~~~~~~~--------~~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~ 393 (476)
T cd03791 330 ILGSG---D----PEYEEALRELAARY--------PGRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRY 393 (476)
T ss_pred EEecC---C----HHHHHHHHHHHHhC--------CCcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhC
Confidence 77742 1 13444555554442 113555655 45777789999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCCCCCceEEEecCccccccC-C--------CceEeCCCCHHHHHHHHHHHhcCC--HHHHHHH
Q 003042 446 RQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S--------GAIRVNPWNVDAVADAMDSALQME--NQEKILR 514 (854)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--------~ai~vnP~d~~~~A~ai~~aL~m~--~~er~~r 514 (854)
|.|+|+|..+|..+.+ + .|+++.|.|+++++++|.+++.+. ++++...
T Consensus 394 ---------------------G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~ 452 (476)
T cd03791 394 ---------------------GTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKL 452 (476)
T ss_pred ---------------------CCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 4599999999999888 3 589999999999999999998643 2333333
Q ss_pred HHHHhccccccChHHHHHHHHHHH
Q 003042 515 HEKHYKYISSHDVAYWAKSIDQDL 538 (854)
Q Consensus 515 ~~~~~~~v~~~~~~~W~~~~l~~l 538 (854)
.++..+ ..+++...++++++-.
T Consensus 453 ~~~~~~--~~fsw~~~a~~~~~~y 474 (476)
T cd03791 453 QRNAMA--QDFSWDRSAKEYLELY 474 (476)
T ss_pred HHHHhc--cCCChHHHHHHHHHHH
Confidence 333222 3578888888776644
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.86 E-value=4e-21 Score=204.38 Aligned_cols=221 Identities=17% Similarity=0.281 Sum_probs=145.4
Q ss_pred eEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccc--eeecCcEEEEECCCc
Q 003042 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLG--LSAEHGYFTRWSKNS 662 (854)
Q Consensus 586 klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~--liaenG~~I~~~~~~ 662 (854)
.+|++||||||+++...+...++++.++++++ .++|+.+++||||+...+..+...++ .-+ ++++||+.|+.++..
T Consensus 2 ~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~-~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~ 80 (249)
T TIGR01485 2 LLLVSDLDNTLVDHTDGDNQALLRLNALLEDH-RGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAE 80 (249)
T ss_pred eEEEEcCCCcCcCCCCCChHHHHHHHHHHHHh-hccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCC
Confidence 58999999999974334577889999999999 89999999999999999998865432 123 788999999876521
Q ss_pred ----ceEEccccccchHH-HHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCC---CE
Q 003042 663 ----AWEICSLTRDFDWK-EIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANE---PV 734 (854)
Q Consensus 663 ----~~~~~~~~~~~~~~-~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~---~~ 734 (854)
.|.... ...|. +.+..+...|....+......+...+.+..... ...+....+.+.+... ..
T Consensus 81 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~l~~~l~~~~~~~~ 150 (249)
T TIGR01485 81 VPDQHWAEYL---SEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPE-------AAPEVIKQLTEMLKETGLDVK 150 (249)
T ss_pred cCCHHHHHHH---hcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechh-------hhhHHHHHHHHHHHhcCCCEE
Confidence 111000 01122 112222333333223322233333444432211 1223344444444322 24
Q ss_pred EEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC-
Q 003042 735 VVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP- 813 (854)
Q Consensus 735 ~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~- 813 (854)
.+.++..++||+|++++||.|++++++++ |++++++++|||+.||++||+.++. .+|+|+++.
T Consensus 151 ~~~~~~~~ldi~~~~~~K~~al~~l~~~~---~i~~~~~i~~GD~~ND~~ml~~~~~-------------~~va~~na~~ 214 (249)
T TIGR01485 151 LIYSSGKDLDILPQGSGKGQALQYLLQKL---AMEPSQTLVCGDSGNDIELFEIGSV-------------RGVIVSNAQE 214 (249)
T ss_pred EEEECCceEEEEeCCCChHHHHHHHHHHc---CCCccCEEEEECChhHHHHHHccCC-------------cEEEECCCHH
Confidence 45678899999999999999999999999 9999999999999999999998542 356777652
Q ss_pred ---cc-------cceEeCC--HhHHHHHHHHH
Q 003042 814 ---SM-------AKYYLDD--TAEVINLLEGL 833 (854)
Q Consensus 814 ---s~-------A~y~l~~--~~eV~~~L~~l 833 (854)
.. +.|+.+. ++++++.|+++
T Consensus 215 ~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~~ 246 (249)
T TIGR01485 215 ELLQWYDENAKDKIYHASERCAGGIIEAIAHF 246 (249)
T ss_pred HHHHHHHhcccCcEEEecCCCcHHHHHHHHHc
Confidence 11 1255543 67788877764
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.7e-20 Score=209.39 Aligned_cols=286 Identities=18% Similarity=0.141 Sum_probs=199.9
Q ss_pred CCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhc-----CC-ChHHH-HHHhhcCCeEeecCHHHHHH
Q 003042 188 NPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRT-----LP-VRDEI-LKSLLNSDLIGFHTFDYARH 260 (854)
Q Consensus 188 ~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~-----lp-~r~ei-l~~ll~~dligf~t~~~~~~ 260 (854)
+| |+|.+|++....++..+.+. .++++.+..|........... .+ .+..+ ...+..+|.|.+.+......
T Consensus 101 ~~--Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 177 (398)
T cd03800 101 RP--DLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEE 177 (398)
T ss_pred Cc--cEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHH
Confidence 55 99999998777766666544 478899999975432111100 00 11111 22345799999988776665
Q ss_pred HHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCC
Q 003042 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKG 340 (854)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KG 340 (854)
+... . .....++.++|+|+|...|...... ......+ ....++.+|+++||+++.||
T Consensus 178 ~~~~----~---------------~~~~~~~~vi~ng~~~~~~~~~~~~---~~~~~~~-~~~~~~~~i~~~gr~~~~k~ 234 (398)
T cd03800 178 LYSL----Y---------------GAYPRRIRVVPPGVDLERFTPYGRA---EARRARL-LRDPDKPRILAVGRLDPRKG 234 (398)
T ss_pred HHHH----c---------------cccccccEEECCCCCccceecccch---hhHHHhh-ccCCCCcEEEEEcccccccC
Confidence 5431 0 0112237789999998877532211 1111111 11146789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHH
Q 003042 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (854)
Q Consensus 341 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly 420 (854)
+..+++|+..+.+++|+++ |+++|....... .....+++.++++ .+..+-+.+.+.++.+++..+|
T Consensus 235 ~~~ll~a~~~l~~~~~~~~----l~i~G~~~~~~~---~~~~~~~~~~~~~-------~~~~~~v~~~g~~~~~~~~~~~ 300 (398)
T cd03800 235 IDTLIRAYAELPELRERAN----LVIVGGPRDDIL---AMDEEELRELARE-------LGVIDRVDFPGRVSREDLPALY 300 (398)
T ss_pred HHHHHHHHHHHHHhCCCeE----EEEEECCCCcch---hhhhHHHHHHHHh-------cCCCceEEEeccCCHHHHHHHH
Confidence 9999999999988877654 888886432221 2222334444444 2333456677899999999999
Q ss_pred HhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHH
Q 003042 421 AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVA 497 (854)
Q Consensus 421 ~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A 497 (854)
+.||++++||..||+|++++|||+| |.|+|+|+.+|..+.+. .|++++|.|+++++
T Consensus 301 ~~adi~l~ps~~e~~~~~l~Ea~a~---------------------G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~ 359 (398)
T cd03800 301 RAADVFVNPALYEPFGLTALEAMAC---------------------GLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALA 359 (398)
T ss_pred HhCCEEEecccccccCcHHHHHHhc---------------------CCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHH
Confidence 9999999999999999999999999 45999999999888882 48999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhccc-cccChHHHHHHHH
Q 003042 498 DAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSID 535 (854)
Q Consensus 498 ~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 535 (854)
++|.+++++++ +++...+..++++ +++++..++++++
T Consensus 360 ~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 360 AALRRLLTDPA-LRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 99999998754 4444555556666 7799999888775
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.5e-21 Score=205.59 Aligned_cols=227 Identities=16% Similarity=0.162 Sum_probs=146.7
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECCC
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKN 661 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~~ 661 (854)
+++|+|++|+||||++ +++.+++.+.++|++| ++.|+.+++||||+...+...+..+. ..++++.||++|+.+++
T Consensus 2 ~~~kli~~DlDGTLl~---~~~~~~~~~~~ai~~l-~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~ 77 (273)
T PRK00192 2 MMKLLVFTDLDGTLLD---HHTYSYEPAKPALKAL-KEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKN 77 (273)
T ss_pred CcceEEEEcCcccCcC---CCCcCcHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEeccc
Confidence 6799999999999999 6778889999999999 89999999999999999988887653 23689999999987543
Q ss_pred c-------------ceEEccccccchHHHHHHHHHHHHhccCCcce-Eecc----c----ceEEE---e-e--ccCCCcc
Q 003042 662 S-------------AWEICSLTRDFDWKEIAEPVMKLYTETTDGSF-IEDK----E----TAIVW---H-H--QHADPHF 713 (854)
Q Consensus 662 ~-------------~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~-ie~k----~----~~l~~---~-~--~~~d~~~ 713 (854)
. .|....... .+.+.+++..+.......+ .... + ..+.. . . ......+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
T PRK00192 78 YFPFQPDGERLKGDYWVIELGPP----YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPF 153 (273)
T ss_pred ccccCCccccccCCceEEEcCCC----HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCce
Confidence 1 121111111 1122222221111000000 0000 0 00000 0 0 0000000
Q ss_pred chhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCC-CeEEEEeCCcccHHHHHHhhhh
Q 003042 714 GSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSP-DFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 714 ~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~-d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
......+..+.+.+.+......+..+..++||+|.+ +||.+++++++++ |+++ +++++|||+.||++||+.+|.
T Consensus 154 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~---~i~~~~~v~~~GDs~NDi~m~~~ag~- 228 (273)
T PRK00192 154 LWNGSEAAKERFEEALKRLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELY---RRQDGVETIALGDSPNDLPMLEAADI- 228 (273)
T ss_pred eecCchHHHHHHHHHHHHcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHH---hccCCceEEEEcCChhhHHHHHhCCe-
Confidence 000012333444444443345555667899999999 9999999999999 9999 999999999999999999986
Q ss_pred cCCCCCCCCccEEEEEecCCC--------ccc-ceEe--C--CHhHHHHHHHHHHh
Q 003042 793 VADPSVPGIAEVFACTVGQKP--------SMA-KYYL--D--DTAEVINLLEGLAT 835 (854)
Q Consensus 793 ~~~~~~~~~~~~~aV~vG~~~--------s~A-~y~l--~--~~~eV~~~L~~l~~ 835 (854)
+|+||++. ..| +++. + +.++|++.|+++..
T Consensus 229 -------------~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~~ 271 (273)
T PRK00192 229 -------------AVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKLLS 271 (273)
T ss_pred -------------eEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHHHh
Confidence 56777642 333 4655 3 47899999998753
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.6e-20 Score=216.19 Aligned_cols=339 Identities=11% Similarity=0.094 Sum_probs=204.2
Q ss_pred hhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCC----CChhh-hhcCC-----
Q 003042 166 RGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPF----PSSEI-YRTLP----- 235 (854)
Q Consensus 166 ~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pf----P~~e~-~~~lp----- 235 (854)
.+.|..-..++...++.+.......-|+|+.|...=-++...|+++. +++..+..|..= +.+.. +....
T Consensus 361 ~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~ 439 (784)
T TIGR02470 361 FEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHF 439 (784)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHh
Confidence 34577777777777776654433112899998655445666666555 688888888541 11111 11111
Q ss_pred -Ch-HHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccc-cccCceeeEEEC--CeEEEEEEeccccCchHHHhhhCCc
Q 003042 236 -VR-DEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNY-ESKRGYIGLDYF--GRTVSIKILPVGIHMGQFESIMSLD 310 (854)
Q Consensus 236 -~r-~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~-~~~~~~~~i~~~--gr~~~i~v~p~GId~~~~~~~~~~~ 310 (854)
.+ +.=+..|-.||.|--.|+.-+..-...+.. .+... -...+...+..+ ....++.++|+|+|+..|.+.....
T Consensus 440 ~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~q-Y~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~ 518 (784)
T TIGR02470 440 SCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQ-YESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKE 518 (784)
T ss_pred hhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhh-hhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchh
Confidence 11 001255667898888775322110000000 00000 000011111111 1123778999999999886532211
Q ss_pred hHH-HHH----------HHHHHHc-----CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCC-
Q 003042 311 VTG-QKV----------KELKEKF-----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARS- 373 (854)
Q Consensus 311 ~~~-~~~----------~~l~~~~-----~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~- 373 (854)
... ... ...++.+ .++++|++|||+++.||+..+++||.++.+.. ..+.||+||.+...
T Consensus 519 ~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~----~~~~LVIVGGg~~~~ 594 (784)
T TIGR02470 519 KRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLR----ELVNLVVVAGKLDAK 594 (784)
T ss_pred hhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhC----CCeEEEEEeCCcccc
Confidence 100 000 0112222 47889999999999999999999998764433 34568888864321
Q ss_pred --ChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCC-CChhhHHHHHH----hCcEEEEccCccCCCCcceeeeeee
Q 003042 374 --SGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP-LSTQDKVPYYA----IAECCVVNCVRDGMNLVPYKYTVSR 446 (854)
Q Consensus 374 --~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~-~~~~el~aly~----~ADv~vv~S~~EG~~Lv~~Ea~a~~ 446 (854)
...+..+..+++.+++++.+ ....+.+.|. .+..++..+|+ .+||||+||.+||||||++|||||
T Consensus 595 ~s~d~ee~~~i~~L~~la~~~g-------L~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAc- 666 (784)
T TIGR02470 595 ESKDREEQAEIEKMHNLIDQYQ-------LHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTC- 666 (784)
T ss_pred cccchhHHHHHHHHHHHHHHhC-------CCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHc-
Confidence 11122233445566665532 2223344443 45566666665 347999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHhc
Q 003042 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQ---MENQEKILRHEKHYK 520 (854)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~ 520 (854)
|.|+|+|..+|+.+.+. .|++|+|.|++++|++|.++++ ..++.++...++.++
T Consensus 667 --------------------GlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~ 726 (784)
T TIGR02470 667 --------------------GLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQ 726 (784)
T ss_pred --------------------CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 56999999999999883 4899999999999999999873 234445555555555
Q ss_pred cc-cccChHHHHHHHHHHH
Q 003042 521 YI-SSHDVAYWAKSIDQDL 538 (854)
Q Consensus 521 ~v-~~~~~~~W~~~~l~~l 538 (854)
++ +++++...++++++.+
T Consensus 727 rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 727 RIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHHHhCCHHHHHHHHHHHH
Confidence 55 6689999999887654
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.8e-20 Score=205.12 Aligned_cols=281 Identities=17% Similarity=0.202 Sum_probs=197.4
Q ss_pred HHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHh-hcCCeEeecCHHHHHH
Q 003042 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL-LNSDLIGFHTFDYARH 260 (854)
Q Consensus 182 ~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~l-l~~dligf~t~~~~~~ 260 (854)
++++..+| |+|++|.+|..++..+++...+..++....|...+...+ +..+.+-. ..++.+...+....+.
T Consensus 73 ~~~~~~~p--div~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~ 144 (360)
T cd04951 73 KILRQFKP--DVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDY 144 (360)
T ss_pred HHHHhcCC--CEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHH
Confidence 34566677 899999999888888887776777888888854332111 11111111 1244444445544444
Q ss_pred HHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccc
Q 003042 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDL 337 (854)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~ 337 (854)
|+... .-...++.++|+|+|...|.... .....+++++ +++++++++||+.+
T Consensus 145 ~~~~~-------------------~~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~ 199 (360)
T cd04951 145 FIASK-------------------AFNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVE 199 (360)
T ss_pred HHhcc-------------------CCCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCch
Confidence 44310 01123677899999988764211 1223355554 46789999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHH
Q 003042 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (854)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~ 417 (854)
.||+..+++|+.++.+++|+++ |+++|. ++..+++++. +.+. +..+.+.+.+. .+++.
T Consensus 200 ~kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~~~~~----~~~~-------~~~~~v~~~g~--~~~~~ 257 (360)
T cd04951 200 AKDYPNLLKAFAKLLSDYLDIK----LLIAGD-----GPLRATLERL----IKAL-------GLSNRVKLLGL--RDDIA 257 (360)
T ss_pred hcCcHHHHHHHHHHHhhCCCeE----EEEEcC-----CCcHHHHHHH----HHhc-------CCCCcEEEecc--cccHH
Confidence 9999999999999998888765 877773 3333334433 3332 22334445554 46899
Q ss_pred HHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-CCceEeCCCCHHHH
Q 003042 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAV 496 (854)
Q Consensus 418 aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~ 496 (854)
.+|+.||++++||..||||++++|||+| |.|+|+|+.+|..+.+ +.|+.++|.|++++
T Consensus 258 ~~~~~ad~~v~~s~~e~~~~~~~Ea~a~---------------------G~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~ 316 (360)
T cd04951 258 AYYNAADLFVLSSAWEGFGLVVAEAMAC---------------------ELPVVATDAGGVREVVGDSGLIVPISDPEAL 316 (360)
T ss_pred HHHHhhceEEecccccCCChHHHHHHHc---------------------CCCEEEecCCChhhEecCCceEeCCCCHHHH
Confidence 9999999999999999999999999999 4599999998888877 45899999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHH
Q 003042 497 ADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (854)
Q Consensus 497 A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 538 (854)
+++|.+++.+++..+..+.+......+.+++..+++++++-+
T Consensus 317 ~~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 317 ANKIDEILKMSGEERDIIGARRERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh
Confidence 999999998887777666666344456799999999887654
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-20 Score=212.66 Aligned_cols=272 Identities=15% Similarity=0.155 Sum_probs=183.6
Q ss_pred cCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCC--ChhhhhcC-------------CChH--HHHH-------
Q 003042 187 INPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFP--SSEIYRTL-------------PVRD--EILK------- 242 (854)
Q Consensus 187 ~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP--~~e~~~~l-------------p~r~--eil~------- 242 (854)
++| |+|..| +-+..+-.+.+.++++|+++++| || +.+.+..+ ..+. .+++
T Consensus 106 ~~p--Dv~i~~--~g~~~~~~~~~~~~~~~~i~y~h--~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~ 179 (419)
T cd03806 106 LVP--DIFIDT--MGYPFTYPLVRLLGGCPVGAYVH--YPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLF 179 (419)
T ss_pred cCC--CEEEEc--CCcccHHHHHHHhcCCeEEEEec--CCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHH
Confidence 467 754444 32333334556677899999999 66 33444221 1111 1211
Q ss_pred ------HhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHH
Q 003042 243 ------SLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKV 316 (854)
Q Consensus 243 ------~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~ 316 (854)
.+-.||.|-..+.....++.+. . +...++.++++|+|.+.|.... .
T Consensus 180 ~~~~~~~~~~aD~ii~~S~~~~~~~~~~----~----------------~~~~~~~vi~~gvd~~~~~~~~---~----- 231 (419)
T cd03806 180 AFLYGLAGSFADVVMVNSTWTRNHIRSL----W----------------KRNTKPSIVYPPCDVEELLKLP---L----- 231 (419)
T ss_pred HHHHHHHhhcCCEEEECCHHHHHHHHHH----h----------------CcCCCcEEEcCCCCHHHhcccc---c-----
Confidence 2335677777665444444321 0 1112567889999988775221 0
Q ss_pred HHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCC-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhc
Q 003042 317 KELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLR-GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLN 395 (854)
Q Consensus 317 ~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~-~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~ 395 (854)
....++++|+++||+.+.||+...|+||.++.+++|+.. .++.|+++|..... +..++.+++++++.+.
T Consensus 232 ----~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~---~~~~~~~~L~~~~~~l--- 301 (419)
T cd03806 232 ----DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE---DDEKRVEDLKLLAKEL--- 301 (419)
T ss_pred ----ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc---ccHHHHHHHHHHHHHh---
Confidence 012356799999999999999999999999999888631 24668888853211 1123455566666553
Q ss_pred cCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecC
Q 003042 396 FGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF 475 (854)
Q Consensus 396 ~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~ 475 (854)
+....+.|.+.++.+++..+|+.||++|.||..||||++++||||| |.|+|+|..
T Consensus 302 ----~l~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~---------------------G~pvIa~~~ 356 (419)
T cd03806 302 ----GLEDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAA---------------------GLIPLAHAS 356 (419)
T ss_pred ----CCCCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHc---------------------CCcEEEEcC
Confidence 3444566777899999999999999999999999999999999999 458999988
Q ss_pred ccccccC-C------CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHH
Q 003042 476 IGCSPSL-S------GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAY 529 (854)
Q Consensus 476 ~G~~~~l-~------~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 529 (854)
+|..+++ . .|++++ |++++|++|.+++++++++++.+.++.++...+++...
T Consensus 357 ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~ 415 (419)
T cd03806 357 GGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDEE 415 (419)
T ss_pred CCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHH
Confidence 8865443 3 378874 99999999999999998777665555555555566544
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.86 E-value=6e-20 Score=217.84 Aligned_cols=333 Identities=14% Similarity=0.154 Sum_probs=200.3
Q ss_pred hhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCC-----------CCCh-hhhhc
Q 003042 166 RGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSP-----------FPSS-EIYRT 233 (854)
Q Consensus 166 ~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~p-----------fP~~-e~~~~ 233 (854)
.+.|..-.+++...++.+....+..-|+|+-|...=-++...|++++ +++..++.|.- |... +-|+.
T Consensus 384 e~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~ 462 (815)
T PLN00142 384 FDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHF 462 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhh
Confidence 45677777777777777655443112999999443335555666555 79999999932 2111 11111
Q ss_pred -CCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccC-----c----eeeEEECCeEEEEEEeccccCchHH
Q 003042 234 -LPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKR-----G----YIGLDYFGRTVSIKILPVGIHMGQF 303 (854)
Q Consensus 234 -lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~-----~----~~~i~~~gr~~~i~v~p~GId~~~~ 303 (854)
+-...|.+ .|-.||.|--.|+.-....-. ++ + .|.+-. + ..+++++ .-++.++|+|+|...|
T Consensus 463 ~~r~~aE~~-a~~~Ad~IIasT~qEi~g~~~---~i-~-qy~sh~~f~~p~L~rvv~GId~~--~~ki~VVppGvD~~~F 534 (815)
T PLN00142 463 SCQFTADLI-AMNHADFIITSTYQEIAGSKD---TV-G-QYESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMSIY 534 (815)
T ss_pred hhchHHHHH-HHHhhhHHHhCcHHHHhcccc---hh-h-hhhcccccccchhhhhhcccccc--ccCeeEECCCCChhhc
Confidence 00111111 444566665444322210000 00 0 010000 0 0011111 1277889999999988
Q ss_pred HhhhCCch--------HHHHH---HHHHHHc-----CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 003042 304 ESIMSLDV--------TGQKV---KELKEKF-----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQI 367 (854)
Q Consensus 304 ~~~~~~~~--------~~~~~---~~l~~~~-----~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi 367 (854)
.+...... ..... ...++.+ .++++|++|||+++.||+..+++||.++.+..++ +.|+++
T Consensus 535 ~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~----~~LVIV 610 (815)
T PLN00142 535 FPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLREL----VNLVVV 610 (815)
T ss_pred CCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCC----cEEEEE
Confidence 64211000 00000 0011111 3577999999999999999999999988666554 458888
Q ss_pred ecCCC-CChhHH--HHHHHHHHHHHHHHhhccCCCCCccEEEEcC---CCChhhHHHHHH-hCcEEEEccCccCCCCcce
Q 003042 368 TNPAR-SSGKDV--QDLLSDTNRIAEEINLNFGKPGYEPIVIIKE---PLSTQDKVPYYA-IAECCVVNCVRDGMNLVPY 440 (854)
Q Consensus 368 ~~p~r-~~~~~~--~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~---~~~~~el~aly~-~ADv~vv~S~~EG~~Lv~~ 440 (854)
|.+.. ...++. .+..+++.+++++.+-. ..|.++.. ..+.++++.+|+ ++|+||+||.+||||+|++
T Consensus 611 Ggg~d~~~s~d~ee~~el~~L~~La~~lgL~------~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvL 684 (815)
T PLN00142 611 GGFIDPSKSKDREEIAEIKKMHSLIEKYNLK------GQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVV 684 (815)
T ss_pred ECCccccccccHHHHHHHHHHHHHHHHcCCC------CcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHH
Confidence 86411 111111 11223455555553211 12444432 345578888777 5799999999999999999
Q ss_pred eeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHHHHHHHHhc---CCHHHHHHH
Q 003042 441 KYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQ---MENQEKILR 514 (854)
Q Consensus 441 Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~---m~~~er~~r 514 (854)
||||| |.|+|+|..+|+.+.+. .|++|+|.|++++|++|.+++. ..++.++..
T Consensus 685 EAMA~---------------------GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~m 743 (815)
T PLN00142 685 EAMTC---------------------GLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKI 743 (815)
T ss_pred HHHHc---------------------CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 99999 45999999999998883 3899999999999999988753 344555555
Q ss_pred HHHHhccc-cccChHHHHHHHHHHH
Q 003042 515 HEKHYKYI-SSHDVAYWAKSIDQDL 538 (854)
Q Consensus 515 ~~~~~~~v-~~~~~~~W~~~~l~~l 538 (854)
.++.++.+ +++++...++++++-.
T Consensus 744 g~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 744 SDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 56656665 6799999999887754
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.8e-21 Score=202.29 Aligned_cols=220 Identities=16% Similarity=0.144 Sum_probs=141.2
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECCCcc--
Q 003042 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKNSA-- 663 (854)
Q Consensus 587 lI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~~~~-- 663 (854)
+|++|+||||++ ..+.+.+.++++|+++ ++.|+.|++||||+...+..++..+. ..+++++||++|...++..
T Consensus 1 li~~DlDGTll~---~~~~~~~~~~~~i~~l-~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~ 76 (256)
T TIGR01486 1 WIFTDLDGTLLD---PHGYDWGPAKEVLERL-QELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTE 76 (256)
T ss_pred CEEEcCCCCCcC---CCCcCchHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccC
Confidence 589999999999 5653444699999999 89999999999999999999887663 3478999999998865432
Q ss_pred ---eEEccccccchHHHHHHHHHHHHhccCCcceE--ec------cc-ceEEE------eeccCCCccchhhHHHHHHHH
Q 003042 664 ---WEICSLTRDFDWKEIAEPVMKLYTETTDGSFI--ED------KE-TAIVW------HHQHADPHFGSCQAKELLDHL 725 (854)
Q Consensus 664 ---~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~i--e~------k~-~~l~~------~~~~~d~~~~~~~~~el~~~l 725 (854)
|.... ..++ +.+.++++.+....+..+. .. .. ..+.. .......-+ .. ..+....+
T Consensus 77 ~~~~~~~~---~i~~-~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~ 150 (256)
T TIGR01486 77 PEYPVIAL---GIPY-EKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETI-LW-SEERRERF 150 (256)
T ss_pred CCeEEEEc---CCCH-HHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCce-ec-ChHHHHHH
Confidence 22111 1111 2233333322111000000 00 00 00000 000000000 00 12233344
Q ss_pred HHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCC--CCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCcc
Q 003042 726 ENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKS--PDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAE 803 (854)
Q Consensus 726 ~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~--~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~ 803 (854)
.+.+......+..+..++||.|++++||.|++++++++ |++ .+++++|||+.||++||+.+|.
T Consensus 151 ~~~~~~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~---~i~~~~~~~~a~GD~~ND~~Ml~~ag~------------ 215 (256)
T TIGR01486 151 TEALVELGLEVTHGNRFYHVLGAGSDKGKAANALKQFY---NQPGGAIKVVGLGDSPNDLPLLEVVDL------------ 215 (256)
T ss_pred HHHHHHcCCEEEeCCceEEEecCCCCHHHHHHHHHHHH---hhcCCCceEEEEcCCHhhHHHHHHCCE------------
Confidence 44443333444455679999999999999999999999 998 9999999999999999999986
Q ss_pred EEEEEecCCC-------cc--cc-eEeC--CHhHHHHHHHHH
Q 003042 804 VFACTVGQKP-------SM--AK-YYLD--DTAEVINLLEGL 833 (854)
Q Consensus 804 ~~aV~vG~~~-------s~--A~-y~l~--~~~eV~~~L~~l 833 (854)
+|+||++. .. |. |++. +.++|.+.|+++
T Consensus 216 --~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 216 --AVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEHL 255 (256)
T ss_pred --EEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHHh
Confidence 56676652 22 34 7763 578899999876
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.8e-20 Score=216.37 Aligned_cols=275 Identities=14% Similarity=0.100 Sum_probs=190.9
Q ss_pred CCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCCh---hhhhc---CCChHH--------HHH-HhhcCCeEeecC
Q 003042 190 DEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS---EIYRT---LPVRDE--------ILK-SLLNSDLIGFHT 254 (854)
Q Consensus 190 ~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~---e~~~~---lp~r~e--------il~-~ll~~dligf~t 254 (854)
+-|+|++|......++..+.++..+.|+.+..|--+|.. ++... .+.... +.+ .+-.||.|...+
T Consensus 173 ~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~Ii~~s 252 (475)
T cd03813 173 KADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRITTLY 252 (475)
T ss_pred CCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEEEecC
Confidence 459999998776666776666666899999999765521 22211 000011 111 122455554443
Q ss_pred HHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecC
Q 003042 255 FDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDD 334 (854)
Q Consensus 255 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdR 334 (854)
.... ..+. .++....++.++|+|||.+.|..... . ....++++|+++||
T Consensus 253 ~~~~-~~~~-------------------~~g~~~~ki~vIpNgid~~~f~~~~~-----~------~~~~~~~~i~~vGr 301 (475)
T cd03813 253 EGNR-ERQI-------------------EDGADPEKIRVIPNGIDPERFAPARR-----A------RPEKEPPVVGLIGR 301 (475)
T ss_pred HHHH-HHHH-------------------HcCCCHHHeEEeCCCcCHHHcCCccc-----c------ccCCCCcEEEEEec
Confidence 3222 1111 11222346788999999988853211 0 11246789999999
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChh
Q 003042 335 MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQ 414 (854)
Q Consensus 335 ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~ 414 (854)
+.+.||+..+++|+..+.++.|+++ |+++|... +..++.+++++++++.+ ..+.+.|.| .+
T Consensus 302 l~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG~g~-----~~~~~~~e~~~li~~l~-------l~~~V~f~G---~~ 362 (475)
T cd03813 302 VVPIKDIKTFIRAAAIVRKKIPDAE----GWVIGPTD-----EDPEYAEECRELVESLG-------LEDNVKFTG---FQ 362 (475)
T ss_pred cccccCHHHHHHHHHHHHHhCCCeE----EEEECCCC-----cChHHHHHHHHHHHHhC-------CCCeEEEcC---Cc
Confidence 9999999999999999998888765 77777422 12345666777776643 333455555 67
Q ss_pred hHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-C--------Cc
Q 003042 415 DKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S--------GA 485 (854)
Q Consensus 415 el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--------~a 485 (854)
++..+|+.||++|+||..|||+++++|||+| |.|+|+|+.+|+.+.+ + .|
T Consensus 363 ~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~---------------------G~PVVatd~g~~~elv~~~~~~~~g~~G 421 (475)
T cd03813 363 NVKEYLPKLDVLVLTSISEGQPLVILEAMAA---------------------GIPVVATDVGSCRELIEGADDEALGPAG 421 (475)
T ss_pred cHHHHHHhCCEEEeCchhhcCChHHHHHHHc---------------------CCCEEECCCCChHHHhcCCcccccCCce
Confidence 8999999999999999999999999999999 4599999999988877 3 48
Q ss_pred eEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccc-cChHHHHHHHHH
Q 003042 486 IRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSIDQ 536 (854)
Q Consensus 486 i~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~ 536 (854)
++++|.|++++|++|.++++.++ .++...+..++++.+ +++...++++.+
T Consensus 422 ~lv~~~d~~~la~ai~~ll~~~~-~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 422 EVVPPADPEALARAILRLLKDPE-LRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred EEECCCCHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999999999999999998654 455555566666655 577777776654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.6e-20 Score=204.77 Aligned_cols=274 Identities=16% Similarity=0.121 Sum_probs=191.0
Q ss_pred HHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCC----CChhhhhcCCChHHHHHH-hhcCCeEeecCHHH
Q 003042 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPF----PSSEIYRTLPVRDEILKS-LLNSDLIGFHTFDY 257 (854)
Q Consensus 183 i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pf----P~~e~~~~lp~r~eil~~-ll~~dligf~t~~~ 257 (854)
+++..+| |+|++|+.+..+....+.+ ..++|+.+.+|.-. +.............+.+. +-.+|.|-+.+...
T Consensus 77 ~~~~~~~--dvvh~~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 77 LLRRHRP--DLVHAHFGFDGVYALPLAR-RLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HHHhhCC--CEEEeccCchHHHHHHHHH-HcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHH
Confidence 4566677 8999997764444433333 34688998888422 111111100011222222 34578888877655
Q ss_pred HHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccc
Q 003042 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDL 337 (854)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~ 337 (854)
.+.+.+. | ....++.++|+|+|.+.+.... ...++++++++||+.+
T Consensus 154 ~~~~~~~-----~---------------~~~~~i~vi~~g~d~~~~~~~~--------------~~~~~~~i~~~G~~~~ 199 (367)
T cd05844 154 RDRLLAL-----G---------------FPPEKVHVHPIGVDTAKFTPAT--------------PARRPPRILFVGRFVE 199 (367)
T ss_pred HHHHHHc-----C---------------CCHHHeEEecCCCCHHhcCCCC--------------CCCCCcEEEEEEeecc
Confidence 5544421 1 1123567899999988764210 0134668999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHH
Q 003042 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (854)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~ 417 (854)
.||+..+++|+..+.+++|+++ |+++|. ++.. +++++++.+ .++.+.+.+.+.++.+++.
T Consensus 200 ~K~~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~----~~~~~~~~~-------~~~~~~v~~~g~~~~~~l~ 259 (367)
T cd05844 200 KKGPLLLLEAFARLARRVPEVR----LVIIGD-----GPLL----AALEALARA-------LGLGGRVTFLGAQPHAEVR 259 (367)
T ss_pred ccChHHHHHHHHHHHHhCCCeE----EEEEeC-----chHH----HHHHHHHHH-------cCCCCeEEECCCCCHHHHH
Confidence 9999999999999998888754 887773 3332 334444443 2333456677889999999
Q ss_pred HHHHhCcEEEEccC------ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC---CCceEe
Q 003042 418 PYYAIAECCVVNCV------RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL---SGAIRV 488 (854)
Q Consensus 418 aly~~ADv~vv~S~------~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~ai~v 488 (854)
.+|+.||++|+||. .||||++++|||+| |.|+|+|+.+|..+.+ ..|+++
T Consensus 260 ~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~---------------------G~PvI~s~~~~~~e~i~~~~~g~~~ 318 (367)
T cd05844 260 ELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQAS---------------------GVPVVATRHGGIPEAVEDGETGLLV 318 (367)
T ss_pred HHHHhCCEEEECcccCCCCCccCCchHHHHHHHc---------------------CCCEEEeCCCCchhheecCCeeEEE
Confidence 99999999999997 59999999999999 4599999999988877 248999
Q ss_pred CCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccc-cccChHHHHHHHH
Q 003042 489 NPWNVDAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSID 535 (854)
Q Consensus 489 nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 535 (854)
+|.|+++++++|.++++.++ .+....++.++++ ..+++..+++++.
T Consensus 319 ~~~d~~~l~~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 319 PEGDVAALAAALGRLLADPD-LRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred CCCCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 99999999999999988654 4445555566666 5689998888765
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-19 Score=201.53 Aligned_cols=267 Identities=15% Similarity=0.108 Sum_probs=182.1
Q ss_pred HHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHH-HhhcCCeEeecCHHHHHHH
Q 003042 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILK-SLLNSDLIGFHTFDYARHF 261 (854)
Q Consensus 183 i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~-~ll~~dligf~t~~~~~~F 261 (854)
+++..+| |+|++|..+...++.++.++.....+.+..|..+...+.+........+.+ .+..+|.+-..+....+.+
T Consensus 75 ~~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~ 152 (358)
T cd03812 75 LIKKNKY--DIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWL 152 (358)
T ss_pred HHhcCCC--CEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHH
Confidence 3445566 899999998777777776666555667788877654433322211101111 1234666666555444433
Q ss_pred HHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc--CCCEEEEEecCccccC
Q 003042 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVDDMDLFK 339 (854)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~iil~VdRld~~K 339 (854)
... ....++.++|+|+|...+... +..... .++.. .++.+|+++||+++.|
T Consensus 153 ~~~---------------------~~~~~~~vi~ngvd~~~~~~~---~~~~~~---~~~~~~~~~~~~i~~vGr~~~~K 205 (358)
T cd03812 153 FGK---------------------VKNKKFKVIPNGIDLEKFIFN---EEIRKK---RRELGILEDKFVIGHVGRFSEQK 205 (358)
T ss_pred HhC---------------------CCcccEEEEeccCcHHHcCCC---chhhhH---HHHcCCCCCCEEEEEEecccccc
Confidence 210 112367889999999877432 111111 11212 4778999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHH
Q 003042 340 GISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPY 419 (854)
Q Consensus 340 Gi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~al 419 (854)
|+..+++|+..+.+++|+++ ++++|. ++..+.+++.++ + .+..+.+.+.|. .+++..+
T Consensus 206 g~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~~~~~~~~~----~-------~~~~~~v~~~g~--~~~~~~~ 263 (358)
T cd03812 206 NHEFLIEIFAELLKKNPNAK----LLLVGD-----GELEEEIKKKVK----E-------LGLEDKVIFLGV--RNDVPEL 263 (358)
T ss_pred ChHHHHHHHHHHHHhCCCeE----EEEEeC-----CchHHHHHHHHH----h-------cCCCCcEEEecc--cCCHHHH
Confidence 99999999999999998765 887773 343344444333 2 233344555555 6789999
Q ss_pred HHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC--CceEeCCCCHHHHH
Q 003042 420 YAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--GAIRVNPWNVDAVA 497 (854)
Q Consensus 420 y~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~vnP~d~~~~A 497 (854)
|+.||++|+||..||||++++|||+| |.|+|+|+.+|..+.+. ++++..+.+++++|
T Consensus 264 ~~~adi~v~ps~~E~~~~~~lEAma~---------------------G~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a 322 (358)
T cd03812 264 LQAMDVFLFPSLYEGLPLVLIEAQAS---------------------GLPCILSDTITKEVDLTDLVKFLSLDESPEIWA 322 (358)
T ss_pred HHhcCEEEecccccCCCHHHHHHHHh---------------------CCCEEEEcCCchhhhhccCccEEeCCCCHHHHH
Confidence 99999999999999999999999999 46999999999888884 35566666789999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhcc
Q 003042 498 DAMDSALQMENQEKILRHEKHYKY 521 (854)
Q Consensus 498 ~ai~~aL~m~~~er~~r~~~~~~~ 521 (854)
++|.++++.++.++..+..+..+.
T Consensus 323 ~~i~~l~~~~~~~~~~~~~~~~~~ 346 (358)
T cd03812 323 EEILKLKSEDRRERSSESIKKKGL 346 (358)
T ss_pred HHHHHHHhCcchhhhhhhhhhccc
Confidence 999999999987766554444433
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-19 Score=205.79 Aligned_cols=314 Identities=16% Similarity=0.148 Sum_probs=207.3
Q ss_pred cccccccccccccCCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCccc-chHHHHHHhccCCCeEEE
Q 003042 141 FCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHL-MVLPSFLRKRFHRVKVGF 219 (854)
Q Consensus 141 f~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl-~llp~~lr~~~~~~~i~~ 219 (854)
+-..-.||-||-.. ..-+..|-++..+.+ +.| .|||----. ..+| ++| +...||+|
T Consensus 109 ~~~~~~~~~~t~~~--------~~~~~~~l~~~~~~~---------~~p---~v~vDt~~~~~~~p-l~~--~~~~~v~~ 165 (463)
T PLN02949 109 WIEEETYPRFTMIG--------QSLGSVYLAWEALCK---------FTP---LYFFDTSGYAFTYP-LAR--LFGCKVVC 165 (463)
T ss_pred ccccccCCceehHH--------HHHHHHHHHHHHHHh---------cCC---CEEEeCCCcccHHH-HHH--hcCCcEEE
Confidence 34556688877663 223567777766654 233 488852211 2223 344 44789999
Q ss_pred EecCCCCChhhhhcCCChH---------------HHHH-------------HhhcCCeEeecCHHHHHHHHHHHHhhhCc
Q 003042 220 FLHSPFPSSEIYRTLPVRD---------------EILK-------------SLLNSDLIGFHTFDYARHFLSSCSRMLGL 271 (854)
Q Consensus 220 flH~pfP~~e~~~~lp~r~---------------eil~-------------~ll~~dligf~t~~~~~~Fl~~~~r~lg~ 271 (854)
.+|-|-=+.+....+-.++ ..++ ..-.+|.|-..+....+++.+. .
T Consensus 166 yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~----~-- 239 (463)
T PLN02949 166 YTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEAL----W-- 239 (463)
T ss_pred EEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHHH----c--
Confidence 9994433443332210000 0111 1134677766655444444321 1
Q ss_pred cccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHH
Q 003042 272 NYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQL 351 (854)
Q Consensus 272 ~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~l 351 (854)
+...++.++++|+|...+... +. +...++++++++||+.+.||+..+|+||.++
T Consensus 240 --------------~~~~~i~vvyp~vd~~~~~~~---~~---------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l 293 (463)
T PLN02949 240 --------------RIPERIKRVYPPCDTSGLQAL---PL---------ERSEDPPYIISVAQFRPEKAHALQLEAFALA 293 (463)
T ss_pred --------------CCCCCeEEEcCCCCHHHcccC---Cc---------cccCCCCEEEEEEeeeccCCHHHHHHHHHHH
Confidence 111246778889998766311 10 0113457899999999999999999999999
Q ss_pred HHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccC
Q 003042 352 LEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCV 431 (854)
Q Consensus 352 l~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~ 431 (854)
+++.++-..++.|+++|... .++..++.+++++++++ .+....+.|.+.++.+++.++|+.||++|.||.
T Consensus 294 ~~~~~~~~~~~~LvIvG~~~---~~~~~~~~~eL~~la~~-------l~L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~ 363 (463)
T PLN02949 294 LEKLDADVPRPKLQFVGSCR---NKEDEERLQKLKDRAKE-------LGLDGDVEFHKNVSYRDLVRLLGGAVAGLHSMI 363 (463)
T ss_pred HHhccccCCCcEEEEEeCCC---CcccHHHHHHHHHHHHH-------cCCCCcEEEeCCCCHHHHHHHHHhCcEEEeCCc
Confidence 87554222245588888642 11222344555555555 333444556678999999999999999999999
Q ss_pred ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-C----C--ceEeCCCCHHHHHHHHHHHh
Q 003042 432 RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S----G--AIRVNPWNVDAVADAMDSAL 504 (854)
Q Consensus 432 ~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~----~--ai~vnP~d~~~~A~ai~~aL 504 (854)
.||||++++|||+| |.|+|++..+|..+++ . + |++++ |++++|++|.+++
T Consensus 364 ~E~FGivvlEAMA~---------------------G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll 420 (463)
T PLN02949 364 DEHFGISVVEYMAA---------------------GAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVL 420 (463)
T ss_pred cCCCChHHHHHHHc---------------------CCcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHH
Confidence 99999999999999 4589999988875433 2 2 67764 8999999999999
Q ss_pred cCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHHHH
Q 003042 505 QMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERAC 542 (854)
Q Consensus 505 ~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 542 (854)
++++++++...++.++.+.+++....++++++.+....
T Consensus 421 ~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~ 458 (463)
T PLN02949 421 RMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPIL 458 (463)
T ss_pred hCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 98877777777777788888999999999988877654
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.1e-19 Score=199.19 Aligned_cols=287 Identities=14% Similarity=0.121 Sum_probs=194.8
Q ss_pred HHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccC---CCeEEEEecCCCCChhhhhcCCChHH-HHHHhhcCCeEe
Q 003042 176 NKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFH---RVKVGFFLHSPFPSSEIYRTLPVRDE-ILKSLLNSDLIG 251 (854)
Q Consensus 176 N~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~---~~~i~~flH~pfP~~e~~~~lp~r~e-il~~ll~~dlig 251 (854)
++.+.+.+ +..+| |+|++|.+....++.++..+.. ++++.+.+|-.-. .....-+.... +...+-.+|.|.
T Consensus 73 ~~~l~~~i-~~~~~--divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~--~~~~~~~~~~~~~~~~~~~~d~ii 147 (371)
T cd04962 73 ASKIAEVA-KRYKL--DLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDI--TLVGQDPSFQPATRFSIEKSDGVT 147 (371)
T ss_pred HHHHHHHH-hcCCc--cEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCcc--ccccccccchHHHHHHHhhCCEEE
Confidence 34444444 45577 8999998776566666654332 6788888884211 01111122222 233456789999
Q ss_pred ecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEE
Q 003042 252 FHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIV 328 (854)
Q Consensus 252 f~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~i 328 (854)
..+......+...+ +...++.++|+|+|...+... .. ...++++ .++++
T Consensus 148 ~~s~~~~~~~~~~~--------------------~~~~~i~vi~n~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~ 199 (371)
T cd04962 148 AVSESLRQETYELF--------------------DITKEIEVIPNFVDEDRFRPK-----PD---EALKRRLGAPEGEKV 199 (371)
T ss_pred EcCHHHHHHHHHhc--------------------CCcCCEEEecCCcCHhhcCCC-----ch---HHHHHhcCCCCCCeE
Confidence 98887766654311 111256789999998766421 11 1223333 47889
Q ss_pred EEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEc
Q 003042 329 ILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIK 408 (854)
Q Consensus 329 il~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~ 408 (854)
++++||+.+.||+..+++|++++.++ +++ .|+.+|. +++...+++. +.+ .+..+.+.+.
T Consensus 200 il~~g~l~~~K~~~~li~a~~~l~~~-~~~----~l~i~G~-----g~~~~~~~~~----~~~-------~~~~~~v~~~ 258 (371)
T cd04962 200 LIHISNFRPVKRIDDVIRIFAKVRKE-VPA----RLLLVGD-----GPERSPAERL----ARE-------LGLQDDVLFL 258 (371)
T ss_pred EEEecccccccCHHHHHHHHHHHHhc-CCc----eEEEEcC-----CcCHHHHHHH----HHH-------cCCCceEEEe
Confidence 99999999999999999999988655 333 3777763 2333334333 333 2223334444
Q ss_pred CCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---Cc
Q 003042 409 EPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GA 485 (854)
Q Consensus 409 ~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~a 485 (854)
+. .+++..+|+.||++|+||..||||++++|||+| |.|+|+|+.+|..+.+. .|
T Consensus 259 g~--~~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~---------------------g~PvI~s~~~~~~e~i~~~~~G 315 (371)
T cd04962 259 GK--QDHVEELLSIADLFLLPSEKESFGLAALEAMAC---------------------GVPVVASNAGGIPEVVKHGETG 315 (371)
T ss_pred cC--cccHHHHHHhcCEEEeCCCcCCCccHHHHHHHc---------------------CCCEEEeCCCCchhhhcCCCce
Confidence 44 458999999999999999999999999999999 45999999999888773 38
Q ss_pred eEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhcc-ccccChHHHHHHHHHHHHH
Q 003042 486 IRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKY-ISSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 486 i~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l~~l~~ 540 (854)
++++|.|+++++++|.++++.+. ++....++.+++ ...+++...++++++-+++
T Consensus 316 ~~~~~~~~~~l~~~i~~l~~~~~-~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 316 FLVDVGDVEAMAEYALSLLEDDE-LWQEFSRAARNRAAERFDSERIVPQYEALYRR 370 (371)
T ss_pred EEcCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 99999999999999999998654 444445555655 5678999998888776653
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.8e-20 Score=194.26 Aligned_cols=199 Identities=16% Similarity=0.112 Sum_probs=122.6
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-c-cceeecCcEEEEECCC-cc
Q 003042 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-K-LGLSAEHGYFTRWSKN-SA 663 (854)
Q Consensus 587 lI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~-l~liaenG~~I~~~~~-~~ 663 (854)
+|++|+||||++ +++.+++.++++|+++ +++|+.|++||||+...+..++..+. . .+++++||+.|+.... ..
T Consensus 1 ~i~~DlDGTLL~---~~~~~~~~~~~~l~~l-~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~ 76 (221)
T TIGR02463 1 WVFSDLDGTLLD---SHSYDWQPAAPWLTRL-QEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWRE 76 (221)
T ss_pred CEEEeCCCCCcC---CCCCCcHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCccccc
Confidence 589999999999 6665666699999999 89999999999999999999887663 2 4689999999987432 11
Q ss_pred e----EEccccccchHHHHHHHHHHHHh---ccCCc-ceEecc-cceEEE------eeccCCCccchhhHHHHHHHHHHH
Q 003042 664 W----EICSLTRDFDWKEIAEPVMKLYT---ETTDG-SFIEDK-ETAIVW------HHQHADPHFGSCQAKELLDHLENV 728 (854)
Q Consensus 664 ~----~~~~~~~~~~~~~~v~~~~~~y~---~~~~g-~~ie~k-~~~l~~------~~~~~d~~~~~~~~~el~~~l~~~ 728 (854)
+ ............+.++.+.+.+. ....+ ...+.. ...+.. ........+......+..+.+.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (221)
T TIGR02463 77 EPGYPRIILGISYGIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPRFTAL 156 (221)
T ss_pred CCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHHHHHH
Confidence 1 11111111112222221111100 00000 000000 000000 000000000000011223333333
Q ss_pred hcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 729 LANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 729 l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
+......+..+..++||.|++++||.|++++++++ |++++++++|||+.||++||+.+|.+
T Consensus 157 l~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~l---gi~~~~vi~~GD~~NDi~ml~~ag~~ 217 (221)
T TIGR02463 157 LADLGLAIVQGNRFSHVLGASSSKGKAANWLKATY---NQPDVKTLGLGDGPNDLPLLEVADYA 217 (221)
T ss_pred HHHcCCeEEecCCeeEEecCCCCHHHHHHHHHHHh---CCCCCcEEEECCCHHHHHHHHhCCce
Confidence 33333445556788999999999999999999999 99999999999999999999999974
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-19 Score=192.20 Aligned_cols=214 Identities=18% Similarity=0.192 Sum_probs=137.7
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCC-c-c-cceeecCcEEEEECC
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV-E-K-LGLSAEHGYFTRWSK 660 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~-~-~-l~liaenG~~I~~~~ 660 (854)
++++++||+||||++ +++.+++++.++|++| ++. +.|++||||+...+.+.++.. . . ..++++||+++...+
T Consensus 6 ~~~i~~~D~DGTLl~---~~~~i~~~~~~ai~~l-~~~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g 80 (245)
T PLN02423 6 PGVIALFDVDGTLTA---PRKEATPEMLEFMKEL-RKV-VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDG 80 (245)
T ss_pred cceEEEEeccCCCcC---CCCcCCHHHHHHHHHH-HhC-CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCC
Confidence 345677999999999 8889999999999999 665 999999999999888877643 1 1 368899999998766
Q ss_pred CcceEEcccc-ccc-hHHHHHHHHHHHHh----ccCCcceEecccceEEEe--eccCCCc---------cchhhHHHHHH
Q 003042 661 NSAWEICSLT-RDF-DWKEIAEPVMKLYT----ETTDGSFIEDKETAIVWH--HQHADPH---------FGSCQAKELLD 723 (854)
Q Consensus 661 ~~~~~~~~~~-~~~-~~~~~v~~~~~~y~----~~~~g~~ie~k~~~l~~~--~~~~d~~---------~~~~~~~el~~ 723 (854)
...+...+.. .+. ...+.++....... ....+.+++..+...... +.+.... .......+..+
T Consensus 81 ~~i~~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 160 (245)
T PLN02423 81 KLIGTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVS 160 (245)
T ss_pred EEEEEecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCccchHHHHHHH
Confidence 5544432211 111 12222221111000 112244444333222111 1111000 00112234445
Q ss_pred HHHHHhcCCC-EEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeC----CcccHHHHHHhhhhcCCCCC
Q 003042 724 HLENVLANEP-VVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGD----DRSDEDMFESIEQAVADPSV 798 (854)
Q Consensus 724 ~l~~~l~~~~-~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD----s~ND~~Mf~~ag~~~~~~~~ 798 (854)
.+.+.+.+.. ....+|..++||+++|+|||.|++.|+ +++++++||| +.||++|++.-|.
T Consensus 161 ~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~--------~~~e~~aFGD~~~~~~ND~eMl~~~~~------- 225 (245)
T PLN02423 161 VLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE--------DFDEIHFFGDKTYEGGNDHEIFESERT------- 225 (245)
T ss_pred HHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc--------CcCeEEEEeccCCCCCCcHHHHhCCCc-------
Confidence 5555554422 233455689999999999999999997 5799999999 8999999997554
Q ss_pred CCCccEEEEEecCCCcccceEeCCHhHHHHHHHHHH
Q 003042 799 PGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLA 834 (854)
Q Consensus 799 ~~~~~~~aV~vG~~~s~A~y~l~~~~eV~~~L~~l~ 834 (854)
.+.+ +.+++++.++|+.+.
T Consensus 226 ------~~~~-----------~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 226 ------IGHT-----------VTSPDDTREQCTALF 244 (245)
T ss_pred ------ceEE-----------eCCHHHHHHHHHHhc
Confidence 2343 568999999998764
|
|
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.1e-19 Score=199.90 Aligned_cols=268 Identities=16% Similarity=0.208 Sum_probs=188.7
Q ss_pred HHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHH
Q 003042 184 MEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLS 263 (854)
Q Consensus 184 ~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~ 263 (854)
++..+| |+|++|..+...+..+..+ ..++++.+.+|-.++.... ...+ +..+|.+-+.+....+.+..
T Consensus 74 ~~~~~~--dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~------~~~~---~~~~~~vi~~s~~~~~~~~~ 141 (355)
T cd03819 74 IREEKV--DIVHARSRAPAWSAYLAAR-RTRPPFVTTVHGFYSVNFR------YNAI---MARGDRVIAVSNFIADHIRE 141 (355)
T ss_pred HHHcCC--CEEEECCCchhHHHHHHHH-hcCCCEEEEeCCchhhHHH------HHHH---HHhcCEEEEeCHHHHHHHHH
Confidence 345566 8999998776555544443 3478999999977764431 1222 34588887777655444431
Q ss_pred HHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccccCC
Q 003042 264 SCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKG 340 (854)
Q Consensus 264 ~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~~KG 340 (854)
..+. ...++.++|+|||...|......+ .....+++++ .++++++++||+.+.||
T Consensus 142 ----~~~~---------------~~~k~~~i~ngi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg 199 (355)
T cd03819 142 ----NYGV---------------DPDRIRVIPRGVDLDRFDPGAVPP---ERILALAREWPLPKGKPVILLPGRLTRWKG 199 (355)
T ss_pred ----hcCC---------------ChhhEEEecCCccccccCccccch---HHHHHHHHHcCCCCCceEEEEeeccccccC
Confidence 1121 123677899999998875332211 1122245554 46789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHH
Q 003042 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (854)
Q Consensus 341 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly 420 (854)
+..+++|+..+.+++++++ |+++|... ....+.+.+.+.+.+ .+..+-+.+.+. .+++..+|
T Consensus 200 ~~~li~~~~~l~~~~~~~~----l~ivG~~~-----~~~~~~~~~~~~~~~-------~~~~~~v~~~g~--~~~~~~~l 261 (355)
T cd03819 200 QEVFIEALARLKKDDPDVH----LLIVGDAQ-----GRRFYYAELLELIKR-------LGLQDRVTFVGH--CSDMPAAY 261 (355)
T ss_pred HHHHHHHHHHHHhcCCCeE----EEEEECCc-----ccchHHHHHHHHHHH-------cCCcceEEEcCC--cccHHHHH
Confidence 9999999999988766654 88887532 222344444444443 223333445555 67999999
Q ss_pred HhCcEEEEcc-CccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHH
Q 003042 421 AIAECCVVNC-VRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAV 496 (854)
Q Consensus 421 ~~ADv~vv~S-~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~ 496 (854)
+.||++++|| ..||||++.+|||+| |.|+|+|..+|..+.+. .|++++|.|++++
T Consensus 262 ~~ad~~i~ps~~~e~~~~~l~EA~a~---------------------G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l 320 (355)
T cd03819 262 ALADIVVSASTEPEAFGRTAVEAQAM---------------------GRPVIASDHGGARETVRPGETGLLVPPGDAEAL 320 (355)
T ss_pred HhCCEEEecCCCCCCCchHHHHHHhc---------------------CCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHH
Confidence 9999999999 789999999999999 45999999888877773 4899999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHhccccc
Q 003042 497 ADAMDSALQMENQEKILRHEKHYKYISS 524 (854)
Q Consensus 497 A~ai~~aL~m~~~er~~r~~~~~~~v~~ 524 (854)
+++|..++..+++++....++.++++.+
T Consensus 321 ~~~i~~~~~~~~~~~~~~~~~a~~~~~~ 348 (355)
T cd03819 321 AQALDQILSLLPEGRAKMFAKARMCVET 348 (355)
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 9999988887777887777777766644
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.7e-19 Score=201.41 Aligned_cols=281 Identities=17% Similarity=0.143 Sum_probs=183.5
Q ss_pred CCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHH---------HhhcCCeEeecCHHHHHHH
Q 003042 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILK---------SLLNSDLIGFHTFDYARHF 261 (854)
Q Consensus 191 ~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~---------~ll~~dligf~t~~~~~~F 261 (854)
.|+|.+|+.... ++ +++... +.++.|++| ||......--.....+.+ .+-.+|.|...+......+
T Consensus 95 ~Dvi~~~~~~~~-~~-~~~~~~-~~~~i~~~h--~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~~ 169 (392)
T cd03805 95 YDVFIVDQVSAC-VP-LLKLFS-PSKILFYCH--FPDQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASVF 169 (392)
T ss_pred CCEEEEcCcchH-HH-HHHHhc-CCcEEEEEe--cChHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHHH
Confidence 389999876643 22 233222 388999999 554322111111111111 1334677776665444333
Q ss_pred HHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCH
Q 003042 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGI 341 (854)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi 341 (854)
... ++. .....+.++|+|||.+.|......+ ..+......++.+|+++||+.+.||+
T Consensus 170 ~~~----~~~--------------~~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~ 226 (392)
T cd03805 170 KKT----FPS--------------LAKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNI 226 (392)
T ss_pred HHH----hcc--------------cccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCCh
Confidence 221 110 0111235789999998775321110 01111122577899999999999999
Q ss_pred HHHHHHHHHHHHhC---CCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHH
Q 003042 342 SLKFLAMGQLLEQH---PDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVP 418 (854)
Q Consensus 342 ~~~l~A~~~ll~~~---p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~a 418 (854)
..+++|++++.+++ |++ .|+.+|..... .++..++.+++++++.+. .+....+.|.|.++.+++..
T Consensus 227 ~~ll~a~~~l~~~~~~~~~~----~l~i~G~~~~~-~~~~~~~~~~l~~~~~~~------~~l~~~V~f~g~~~~~~~~~ 295 (392)
T cd03805 227 ALAIEAFAILKDKLAEFKNV----RLVIAGGYDPR-VAENVEYLEELQRLAEEL------LLLEDQVIFLPSISDSQKEL 295 (392)
T ss_pred HHHHHHHHHHHhhcccccCe----EEEEEcCCCCC-CchhHHHHHHHHHHHHHh------cCCCceEEEeCCCChHHHHH
Confidence 99999999998887 554 48888854311 122234455555555440 12334556777899999999
Q ss_pred HHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHH
Q 003042 419 YYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDA 495 (854)
Q Consensus 419 ly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~ 495 (854)
+|+.||++++||..||||++++|||+| |.|+|+|+.+|..+.+. .|++++| |+++
T Consensus 296 ~l~~ad~~l~~s~~E~~g~~~lEAma~---------------------G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~ 353 (392)
T cd03805 296 LLSSARALLYTPSNEHFGIVPLEAMYA---------------------GKPVIACNSGGPLETVVDGETGFLCEP-TPEE 353 (392)
T ss_pred HHhhCeEEEECCCcCCCCchHHHHHHc---------------------CCCEEEECCCCcHHHhccCCceEEeCC-CHHH
Confidence 999999999999999999999999999 45999999988887773 3788877 9999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHhccc-cccChHHHHHH
Q 003042 496 VADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKS 533 (854)
Q Consensus 496 ~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~ 533 (854)
+|++|.+++..++. ++...++.++++ .++++..++++
T Consensus 354 ~a~~i~~l~~~~~~-~~~~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 354 FAEAMLKLANDPDL-ADRMGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHHhChHH-HHHHHHHHHHHHHHhcCHHHHhhh
Confidence 99999999988753 444555555555 55788877764
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.2e-20 Score=192.37 Aligned_cols=214 Identities=18% Similarity=0.253 Sum_probs=143.1
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-cc--ceeecCcEEEEECCCcc
Q 003042 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KL--GLSAEHGYFTRWSKNSA 663 (854)
Q Consensus 587 lI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l--~liaenG~~I~~~~~~~ 663 (854)
+|++||||||++ +++.+++.+ ++++ + +++|+.++++|||+...+..++..+. .. .++++||+.|.......
T Consensus 1 li~~DlDgTLl~---~~~~~~~~~-~~~~-~-~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~ 74 (236)
T TIGR02471 1 LIITDLDNTLLG---DDEGLASFV-ELLR-G-SGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQ 74 (236)
T ss_pred CeEEeccccccC---CHHHHHHHH-HHHH-h-cCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCC
Confidence 589999999999 677777766 7776 6 78999999999999999999986652 12 37899999887653210
Q ss_pred eEEccccccchHHHHH-----HHHHHHHhccCCcceEeccc--ceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEE
Q 003042 664 WEICSLTRDFDWKEIA-----EPVMKLYTETTDGSFIEDKE--TAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVV 736 (854)
Q Consensus 664 ~~~~~~~~~~~~~~~v-----~~~~~~y~~~~~g~~ie~k~--~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v 736 (854)
.+..|.... ...+..+....++...+.+. ....+++... ++.. ....++.+.+.+. ......+
T Consensus 75 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~~~~~~~~l~~~-~~~~~~~ 144 (236)
T TIGR02471 75 -------PDRFWQKHIDHDWRRQAVVEALADIPGLTLQDDQEQGPFKISYLLD-PEGE-PILPQIRQRLRQQ-SQAAKVI 144 (236)
T ss_pred -------CChhHHHHHhcCCCHHHHHHHHhcCCCcEeCChhcCCCeeEEEEEC-cccc-hHHHHHHHHHHhc-cCCEEEE
Confidence 011121111 00112222334554444433 1234444432 2211 1123333344332 1112345
Q ss_pred EEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----
Q 003042 737 KRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK---- 812 (854)
Q Consensus 737 ~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~---- 812 (854)
.++..++|+.|+++||+.|++.+++++ |++++++++|||+.||++||+.++. +|+||++
T Consensus 145 ~~~~~~~ei~~~~~~K~~al~~l~~~~---g~~~~~~i~~GD~~nD~~ml~~~~~--------------~iav~na~~~~ 207 (236)
T TIGR02471 145 LSCGWFLDVLPLRASKGLALRYLSYRW---GLPLEQILVAGDSGNDEEMLRGLTL--------------GVVVGNHDPEL 207 (236)
T ss_pred EECCceEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEEcCCccHHHHHcCCCc--------------EEEEcCCcHHH
Confidence 667788999999999999999999999 9999999999999999999999875 5677765
Q ss_pred Ccccc----eEeC--CHhHHHHHHHHH
Q 003042 813 PSMAK----YYLD--DTAEVINLLEGL 833 (854)
Q Consensus 813 ~s~A~----y~l~--~~~eV~~~L~~l 833 (854)
+..|+ |+++ +.++|.+.|+.+
T Consensus 208 k~~a~~~~~~v~~~~~~~Gv~~~i~~~ 234 (236)
T TIGR02471 208 EGLRHQQRIYFANNPHAFGILEGINHY 234 (236)
T ss_pred HHhhcCCcEEEcCCCChhHHHHHHHhh
Confidence 45677 7664 357899988764
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4e-19 Score=202.31 Aligned_cols=293 Identities=11% Similarity=0.056 Sum_probs=184.3
Q ss_pred HHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeE-EEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHH
Q 003042 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKV-GFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHF 261 (854)
Q Consensus 183 i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i-~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~F 261 (854)
++...+| |+|+.|++.-.++..+.... ..+++ ....|. ++...--+.+-... +.+..++++--.+. +..+.
T Consensus 275 ~ir~~rp--DIVHt~~~~a~l~g~laA~l-agvpviv~~~h~-~~~~~~~r~~~~e~---~~~~~a~~i~~~sd-~v~~s 346 (578)
T PRK15490 275 HLCERKL--DYLSVWQDGACLMIALAALI-AGVPRIQLGLRG-LPPVVRKRLFKPEY---EPLYQALAVVPGVD-FMSNN 346 (578)
T ss_pred HHHHcCC--CEEEEcCcccHHHHHHHHHh-cCCCEEEEeecc-cCCcchhhHHHHHH---HHhhhhceeEecch-hhhcc
Confidence 4455577 89999999976664444333 24445 344565 33221111110001 12333444333222 33222
Q ss_pred HHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc-CCCEEEEEecCccccCC
Q 003042 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMDLFKG 340 (854)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iil~VdRld~~KG 340 (854)
....+.+.. .++....+|.++|+|||+..|.+....+ ......++..+ .+..+|++|+|+.+.||
T Consensus 347 ~~v~~~l~~------------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg 412 (578)
T PRK15490 347 HCVTRHYAD------------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFVGDKN 412 (578)
T ss_pred HHHHHHHHH------------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEehhcC
Confidence 221111100 0011234678999999998886432111 11122222233 34568899999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHH
Q 003042 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (854)
Q Consensus 341 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly 420 (854)
...+++|+.++++++|+++ |+++| +|+..+ ++++++.+ .+..+.+.|.|. .+++..+|
T Consensus 413 ~~~LI~A~a~llk~~pdir----LvIVG-----dG~~~e----eLk~la~e-------lgL~d~V~FlG~--~~Dv~~~L 470 (578)
T PRK15490 413 PFAWIDFAARYLQHHPATR----FVLVG-----DGDLRA----EAQKRAEQ-------LGILERILFVGA--SRDVGYWL 470 (578)
T ss_pred HHHHHHHHHHHHhHCCCeE----EEEEe-----CchhHH----HHHHHHHH-------cCCCCcEEECCC--hhhHHHHH
Confidence 9999999999999988765 88777 344333 34444444 334445556665 57899999
Q ss_pred HhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-C--CceEeCCCCHHHHH
Q 003042 421 AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S--GAIRVNPWNVDAVA 497 (854)
Q Consensus 421 ~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~ai~vnP~d~~~~A 497 (854)
+.||+||+||.+||||++++|||+| |.|+|+|..+|+.+.+ + +|++|+|.|+++++
T Consensus 471 aaADVfVlPS~~EGfp~vlLEAMA~---------------------GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa 529 (578)
T PRK15490 471 QKMNVFILFSRYEGLPNVLIEAQMV---------------------GVPVISTPAGGSAECFIEGVSGFILDDAQTVNLD 529 (578)
T ss_pred HhCCEEEEcccccCccHHHHHHHHh---------------------CCCEEEeCCCCcHHHcccCCcEEEECCCChhhHH
Confidence 9999999999999999999999999 4599999999988877 2 48999999999999
Q ss_pred HHHHHHhcCCH--HHHHHHHHHHhccc-cccChHHHHHHHHHHHHH
Q 003042 498 DAMDSALQMEN--QEKILRHEKHYKYI-SSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 498 ~ai~~aL~m~~--~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 540 (854)
+++..+..+.. ..+....++.++++ .++++...++++++-+..
T Consensus 530 ~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 530 QACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 98854433221 22333445566666 559999999888876653
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.1e-19 Score=213.71 Aligned_cols=282 Identities=15% Similarity=0.121 Sum_probs=182.8
Q ss_pred HHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEE-EecCCCC---ChhhhhcCCChHHHHHHhhcCCeEeec--CHHH
Q 003042 184 MEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGF-FLHSPFP---SSEIYRTLPVRDEILKSLLNSDLIGFH--TFDY 257 (854)
Q Consensus 184 ~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~-flH~pfP---~~e~~~~lp~r~eil~~ll~~dligf~--t~~~ 257 (854)
++..+| |+|++|.+.-.++..+..+. ..+++.+ .+|. +| ..+.|+. ....+.+.+..++.+.+- +...
T Consensus 396 lk~~kp--DIVH~h~~~a~~lg~lAa~~-~gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~ 469 (694)
T PRK15179 396 MRSSVP--SVVHIWQDGSIFACALAALL-AGVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFA 469 (694)
T ss_pred HHHcCC--cEEEEeCCcHHHHHHHHHHH-cCCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHH
Confidence 344466 89999998876666655543 3455544 4564 32 1221110 011122333334433332 2222
Q ss_pred HHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc-CCCEEEEEecCcc
Q 003042 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMD 336 (854)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iil~VdRld 336 (854)
++.+.. .+| ....+|.++|+|||...|.+ .+........++... .+.++|++|||++
T Consensus 470 ~~~l~~----~~g---------------~~~~kI~VI~NGVd~~~f~~---~~~~~~~~~~~~~~~~~~~~vIg~VGRL~ 527 (694)
T PRK15179 470 AHRYAD----WLG---------------VDERRIPVVYNGLAPLKSVQ---DDACTAMMAQFDARTSDARFTVGTVMRVD 527 (694)
T ss_pred HHHHHH----HcC---------------CChhHEEEECCCcCHHhcCC---CchhhHHHHhhccccCCCCeEEEEEEeCC
Confidence 223322 111 22346888999999887742 121111122222222 2467899999999
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhH
Q 003042 337 LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDK 416 (854)
Q Consensus 337 ~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el 416 (854)
+.||+..+++||.++++++|+++ |+++|. |+.. +++++++.+ .+....+.|.|.. +++
T Consensus 528 ~~KG~~~LI~A~a~l~~~~p~~~----LvIvG~-----G~~~----~~L~~l~~~-------lgL~~~V~flG~~--~dv 585 (694)
T PRK15179 528 DNKRPFLWVEAAQRFAASHPKVR----FIMVGG-----GPLL----ESVREFAQR-------LGMGERILFTGLS--RRV 585 (694)
T ss_pred ccCCHHHHHHHHHHHHHHCcCeE----EEEEcc-----Ccch----HHHHHHHHH-------cCCCCcEEEcCCc--chH
Confidence 99999999999999999999765 888874 3332 334444444 3445567777764 579
Q ss_pred HHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCH
Q 003042 417 VPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNV 493 (854)
Q Consensus 417 ~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~ 493 (854)
..+|+.||+||+||.+|||+++++|||+| +.|+|+|..+|+.+.+. .|++|+|.|.
T Consensus 586 ~~ll~aaDv~VlpS~~Egfp~vlLEAMA~---------------------G~PVVat~~gG~~EiV~dg~~GlLv~~~d~ 644 (694)
T PRK15179 586 GYWLTQFNAFLLLSRFEGLPNVLIEAQFS---------------------GVPVVTTLAGGAGEAVQEGVTGLTLPADTV 644 (694)
T ss_pred HHHHHhcCEEEeccccccchHHHHHHHHc---------------------CCeEEEECCCChHHHccCCCCEEEeCCCCC
Confidence 99999999999999999999999999999 45999999999888883 3899998875
Q ss_pred --HHHHHHHHHHhcCCHHHHHHHHHHHhccc-cccChHHHHHHHHHH
Q 003042 494 --DAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQD 537 (854)
Q Consensus 494 --~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~ 537 (854)
++++++|.+++......... .++.++++ .++++...++++++-
T Consensus 645 ~~~~La~aL~~ll~~l~~~~~l-~~~ar~~a~~~FS~~~~~~~~~~l 690 (694)
T PRK15179 645 TAPDVAEALARIHDMCAADPGI-ARKAADWASARFSLNQMIASTVRC 690 (694)
T ss_pred ChHHHHHHHHHHHhChhccHHH-HHHHHHHHHHhCCHHHHHHHHHHH
Confidence 68999999888754333333 23445555 568888888877654
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-18 Score=198.39 Aligned_cols=282 Identities=15% Similarity=0.146 Sum_probs=192.6
Q ss_pred CeEEEeCcccch-HHHHHHhccCCCeEEEEecCCCCChhhhhc-CC--Ch----HHHHHH-hhcCCeEeecCHHHHHHHH
Q 003042 192 DYVWIHDYHLMV-LPSFLRKRFHRVKVGFFLHSPFPSSEIYRT-LP--VR----DEILKS-LLNSDLIGFHTFDYARHFL 262 (854)
Q Consensus 192 D~vwihDyhl~l-lp~~lr~~~~~~~i~~flH~pfP~~e~~~~-lp--~r----~eil~~-ll~~dligf~t~~~~~~Fl 262 (854)
|+|++|...+.. ...++-++..++++.+..|.-||..-.-.. .+ .. ..+.+. +-.+|.|...+....+.+.
T Consensus 108 Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~ 187 (412)
T PRK10307 108 DRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKAR 187 (412)
T ss_pred CEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHH
Confidence 999999766543 333333444467788888876653311110 10 00 111122 3358888888877666553
Q ss_pred HHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccccC
Q 003042 263 SSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFK 339 (854)
Q Consensus 263 ~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~~K 339 (854)
+ .+ ....++.++|+|||.+.|..... .....+++++ .++++|+++||+.+.|
T Consensus 188 ~-----~~---------------~~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 188 E-----KG---------------VAAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred H-----cC---------------CCcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 2 11 12346788999999988753211 1123355555 3568999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHH
Q 003042 340 GISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPY 419 (854)
Q Consensus 340 Gi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~al 419 (854)
|+..+++|++++ +++|+ +.|+++| +|+..++++ +++.+ .+...| .|.|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~----~~l~ivG-----~g~~~~~l~----~~~~~-------~~l~~v-~f~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPD----LIFVICG-----QGGGKARLE----KMAQC-------RGLPNV-HFLPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCC----eEEEEEC-----CChhHHHHH----HHHHH-------cCCCce-EEeCCCCHHHHHHH
Confidence 999999999876 44555 4488777 344433343 33333 233334 45678999999999
Q ss_pred HHhCcEEEEccCccCCCCc----ceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccc--cccC-CCceEeCCCC
Q 003042 420 YAIAECCVVNCVRDGMNLV----PYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC--SPSL-SGAIRVNPWN 492 (854)
Q Consensus 420 y~~ADv~vv~S~~EG~~Lv----~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--~~~l-~~ai~vnP~d 492 (854)
|+.||++|+||..|+++++ .+|||+| |.|+|+|..+|. .+.+ ..|++++|.|
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~---------------------G~PVi~s~~~g~~~~~~i~~~G~~~~~~d 359 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLAS---------------------GRNVVATAEPGTELGQLVEGIGVCVEPES 359 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHc---------------------CCCEEEEeCCCchHHHHHhCCcEEeCCCC
Confidence 9999999999999996654 5899999 458999988774 2444 5699999999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhcccc-ccChHHHHHHHHHHHHHHH
Q 003042 493 VDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQDLERAC 542 (854)
Q Consensus 493 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~~~ 542 (854)
++++|++|.+++++++ ++....++.++++. ++|+...+++|++.++++.
T Consensus 360 ~~~la~~i~~l~~~~~-~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 360 VEALVAAIAALARQAL-LRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 9999999999987764 45556666677665 6899999999999888653
|
|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.2e-19 Score=197.16 Aligned_cols=275 Identities=17% Similarity=0.154 Sum_probs=198.1
Q ss_pred cCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCCh--hhhh---cCCChHHHHHHhhcCCeEeecCHHHHHHH
Q 003042 187 INPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS--EIYR---TLPVRDEILKSLLNSDLIGFHTFDYARHF 261 (854)
Q Consensus 187 ~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~--e~~~---~lp~r~eil~~ll~~dligf~t~~~~~~F 261 (854)
.++ |+||+|.+..... +....++.+.+|..+|.. +.+. ....+.-+...+..+|.+.+.+...++.+
T Consensus 84 ~~~--Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~ 155 (365)
T cd03809 84 LGL--DLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDL 155 (365)
T ss_pred cCC--CeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHH
Confidence 455 9999998887766 456899999999766532 1111 01123344455667899988887666666
Q ss_pred HHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCH
Q 003042 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGI 341 (854)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi 341 (854)
.+.. +. ...++.++|+|+|...+.... ... ........++++|+++||+.+.||+
T Consensus 156 ~~~~----~~---------------~~~~~~vi~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~i~~~G~~~~~K~~ 210 (365)
T cd03809 156 LRYL----GV---------------PPDKIVVIPLGVDPRFRPPPA-----EAE-VLRALYLLPRPYFLYVGTIEPRKNL 210 (365)
T ss_pred HHHh----Cc---------------CHHHEEeeccccCccccCCCc-----hHH-HHHHhcCCCCCeEEEeCCCccccCH
Confidence 5421 10 123567899999988764211 111 1112223578899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHH
Q 003042 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (854)
Q Consensus 342 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~ 421 (854)
..+++|+..+.+++|+++ |+++|... .........++ + .+..+.+.+.+.++.+++..+|+
T Consensus 211 ~~~l~~~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~----~-------~~~~~~v~~~g~~~~~~~~~~~~ 271 (365)
T cd03809 211 ERLLEAFARLPAKGPDPK----LVIVGKRG----WLNEELLARLR----E-------LGLGDRVRFLGYVSDEELAALYR 271 (365)
T ss_pred HHHHHHHHHHHHhcCCCC----EEEecCCc----cccHHHHHHHH----H-------cCCCCeEEECCCCChhHHHHHHh
Confidence 999999999998887554 77777432 11122222221 1 23345677888999999999999
Q ss_pred hCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-CCceEeCCCCHHHHHHHH
Q 003042 422 IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAM 500 (854)
Q Consensus 422 ~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ai 500 (854)
.||++++||..||+|++++|||+| |.|+|+|+.+|..+.+ .+++.+++.|.++++++|
T Consensus 272 ~~d~~l~ps~~e~~~~~~~Ea~a~---------------------G~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i 330 (365)
T cd03809 272 GARAFVFPSLYEGFGLPVLEAMAC---------------------GTPVIASNISSLPEVAGDAALYFDPLDPEALAAAI 330 (365)
T ss_pred hhhhhcccchhccCCCCHHHHhcC---------------------CCcEEecCCCCccceecCceeeeCCCCHHHHHHHH
Confidence 999999999999999999999999 4589999988877776 568999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHhccccccChHHHHHHHH
Q 003042 501 DSALQMENQEKILRHEKHYKYISSHDVAYWAKSID 535 (854)
Q Consensus 501 ~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 535 (854)
.++++.++ .+....+..++++.++++..++++++
T Consensus 331 ~~l~~~~~-~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 331 ERLLEDPA-LREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred HHHhcCHH-HHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 99987554 44555555667888899999998875
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.1e-18 Score=196.75 Aligned_cols=272 Identities=14% Similarity=0.100 Sum_probs=188.9
Q ss_pred CCCCCeEEEeCcccch-HHHHHHhccCCCeEEEEecCC--CCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHH
Q 003042 188 NPDEDYVWIHDYHLMV-LPSFLRKRFHRVKVGFFLHSP--FPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSS 264 (854)
Q Consensus 188 ~~~~D~vwihDyhl~l-lp~~lr~~~~~~~i~~flH~p--fP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~ 264 (854)
+++.|+++.|-+|-.. ...+++++....++....|-. ++.......++.++.+ +-.+|.|.+.+....+.+.+.
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~---~~~~d~ii~~S~~~~~~l~~~ 201 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRYPSGYIPLRRYL---LSSLDAVFPCSEQGRNYLQKR 201 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhccccchHHHHHH---HhcCCEEEECCHHHHHHHHHH
Confidence 3444777776555433 334566766666788899932 1111111122233333 346899988887666544321
Q ss_pred HHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHH
Q 003042 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLK 344 (854)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~ 344 (854)
.+ ....++.++|+|++...+... ....++..|+++||+.+.||+..+
T Consensus 202 ----~~---------------~~~~ki~vi~~gv~~~~~~~~--------------~~~~~~~~il~~Grl~~~Kg~~~l 248 (407)
T cd04946 202 ----YP---------------AYKEKIKVSYLGVSDPGIISK--------------PSKDDTLRIVSCSYLVPVKRVDLI 248 (407)
T ss_pred ----CC---------------CccccEEEEECCcccccccCC--------------CCCCCCEEEEEeeccccccCHHHH
Confidence 11 122356788999998765321 011356789999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHh--
Q 003042 345 FLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAI-- 422 (854)
Q Consensus 345 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~-- 422 (854)
++|+.++.+++|+.. +.++.+|. +++..++++.+ .+ .+..+.+.+.|.++.+|+.++|+.
T Consensus 249 i~a~~~l~~~~p~~~--l~~~iiG~-----g~~~~~l~~~~----~~-------~~~~~~V~f~G~v~~~e~~~~~~~~~ 310 (407)
T cd04946 249 IKALAALAKARPSIK--IKWTHIGG-----GPLEDTLKELA----ES-------KPENISVNFTGELSNSEVYKLYKENP 310 (407)
T ss_pred HHHHHHHHHhCCCce--EEEEEEeC-----chHHHHHHHHH----Hh-------cCCCceEEEecCCChHHHHHHHhhcC
Confidence 999999999998764 66776663 34434444433 22 122345667889999999999986
Q ss_pred CcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCCC---ceEeCC-CCHHHHHH
Q 003042 423 AECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSG---AIRVNP-WNVDAVAD 498 (854)
Q Consensus 423 ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~---ai~vnP-~d~~~~A~ 498 (854)
||+|+.||..|||+++++|||+| |.|+|+|..+|..+.+.+ |++++| .|++++|+
T Consensus 311 ~~v~v~~S~~Eg~p~~llEAma~---------------------G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~ 369 (407)
T cd04946 311 VDVFVNLSESEGLPVSIMEAMSF---------------------GIPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVS 369 (407)
T ss_pred CCEEEeCCccccccHHHHHHHHc---------------------CCCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHH
Confidence 78999999999999999999999 459999999998888843 688876 48999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHhccc-cccChHHHHHHHH
Q 003042 499 AMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSID 535 (854)
Q Consensus 499 ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 535 (854)
+|.++++.++ ++....++.++++ .++++..+.++|+
T Consensus 370 ~I~~ll~~~~-~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 370 SLSKFIDNEE-EYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHhCHH-HHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 9999998554 5555556666665 5689888888775
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.9e-18 Score=191.97 Aligned_cols=274 Identities=17% Similarity=0.168 Sum_probs=193.8
Q ss_pred HHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHH
Q 003042 178 VFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDY 257 (854)
Q Consensus 178 ~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~ 257 (854)
.++..+ +..++ |+|++|..+...+..++..+....+..+.+|.+-. +... ....+-+.+-.+|.+-..+...
T Consensus 70 ~~~~~~-~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~vi~~s~~~ 141 (355)
T cd03799 70 VLAREL-RRLGI--DHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDI----FRSP-DAIDLDEKLARADFVVAISEYN 141 (355)
T ss_pred HHHHHH-HhcCC--CEEEECCCCchHHHHHHHHHhcCCCEEEEEecccc----cccC-chHHHHHHHhhCCEEEECCHHH
Confidence 333333 34455 89999987766666666666667889999985321 1111 1123344455799999988877
Q ss_pred HHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccc
Q 003042 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDL 337 (854)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~ 337 (854)
.+.+.+. . +....++.++|+|+|...+.... .....++..|+++||+.+
T Consensus 142 ~~~l~~~----~---------------~~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~ 190 (355)
T cd03799 142 RQQLIRL----L---------------GCDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVE 190 (355)
T ss_pred HHHHHHh----c---------------CCCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeecc
Confidence 7665431 0 12234678899999988774211 112245678999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHH
Q 003042 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (854)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~ 417 (854)
.||+..+++|++++.+++|++ .|+.+|.. +...++++ .+.+ .+..+.+.+.+.++.+|+.
T Consensus 191 ~k~~~~l~~~~~~l~~~~~~~----~l~i~G~~-----~~~~~~~~----~~~~-------~~~~~~v~~~g~~~~~~l~ 250 (355)
T cd03799 191 KKGLDYLLEALALLKDRGIDF----RLDIVGDG-----PLRDELEA----LIAE-------LGLEDRVTLLGAKSQEEVR 250 (355)
T ss_pred ccCHHHHHHHHHHHhhcCCCe----EEEEEECC-----ccHHHHHH----HHHH-------cCCCCeEEECCcCChHHHH
Confidence 999999999999998776654 47777742 22233333 3333 2334567788899999999
Q ss_pred HHHHhCcEEEEccCc------cCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEe
Q 003042 418 PYYAIAECCVVNCVR------DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRV 488 (854)
Q Consensus 418 aly~~ADv~vv~S~~------EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~v 488 (854)
.+|+.||++++||.. ||||++++|||+| |.|+|+|..+|..+.+. .|+++
T Consensus 251 ~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~---------------------G~Pvi~~~~~~~~~~i~~~~~g~~~ 309 (355)
T cd03799 251 ELLRAADLFVLPSVTAADGDREGLPVVLMEAMAM---------------------GLPVISTDVSGIPELVEDGETGLLV 309 (355)
T ss_pred HHHHhCCEEEecceecCCCCccCccHHHHHHHHc---------------------CCCEEecCCCCcchhhhCCCceEEe
Confidence 999999999999999 9999999999999 45899998877776662 48999
Q ss_pred CCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccc-cccChHHHHH
Q 003042 489 NPWNVDAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAK 532 (854)
Q Consensus 489 nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~ 532 (854)
+|.|+++++++|.+++++++. +....+..++++ ..+++...++
T Consensus 310 ~~~~~~~l~~~i~~~~~~~~~-~~~~~~~a~~~~~~~~s~~~~~~ 353 (355)
T cd03799 310 PPGDPEALADAIERLLDDPEL-RREMGEAGRARVEEEFDIRKQAA 353 (355)
T ss_pred CCCCHHHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHhcCHHHHhh
Confidence 999999999999999987754 444444555555 4577666554
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.9e-18 Score=190.00 Aligned_cols=287 Identities=18% Similarity=0.160 Sum_probs=203.0
Q ss_pred HHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhh----cCCChHHHHHHhhcCCeEeecCHHHH
Q 003042 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYR----TLPVRDEILKSLLNSDLIGFHTFDYA 258 (854)
Q Consensus 183 i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~----~lp~r~eil~~ll~~dligf~t~~~~ 258 (854)
+.+..++ |+|++|+++...+.. +..+.++.++.+.+|.+++...... ...........+..+|.+-+.+....
T Consensus 80 ~~~~~~~--Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 156 (374)
T cd03801 80 LLRRERF--DVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATR 156 (374)
T ss_pred HhhhcCC--cEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence 3444466 899999999887776 4455678999999999887543211 01111222233456788888887666
Q ss_pred HHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCcccc
Q 003042 259 RHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLF 338 (854)
Q Consensus 259 ~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~ 338 (854)
+.+.+. +.....++.++|+|+|...+.... ...........+++.++++||+++.
T Consensus 157 ~~~~~~-------------------~~~~~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~~g~~~~~ 211 (374)
T cd03801 157 EELREL-------------------GGVPPEKITVIPNGVDTERFRPAP------RAARRRLGIPEDEPVILFVGRLVPR 211 (374)
T ss_pred HHHHhc-------------------CCCCCCcEEEecCcccccccCccc------hHHHhhcCCcCCCeEEEEecchhhh
Confidence 655431 011124678899999988764211 0011111112467889999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHH
Q 003042 339 KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVP 418 (854)
Q Consensus 339 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~a 418 (854)
||+..+++|+..+.+++|++ .|+.+|. ++....+++.+ .+ .+..+.+.+.+.++.+|+..
T Consensus 212 k~~~~~i~~~~~~~~~~~~~----~l~i~G~-----~~~~~~~~~~~----~~-------~~~~~~v~~~g~~~~~~~~~ 271 (374)
T cd03801 212 KGVDLLLEALAKLRKEYPDV----RLVIVGD-----GPLREELEALA----AE-------LGLGDRVTFLGFVPDEDLPA 271 (374)
T ss_pred cCHHHHHHHHHHHhhhcCCe----EEEEEeC-----cHHHHHHHHHH----HH-------hCCCcceEEEeccChhhHHH
Confidence 99999999999998888654 4777772 23333333333 22 22334556777899999999
Q ss_pred HHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHH
Q 003042 419 YYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDA 495 (854)
Q Consensus 419 ly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~ 495 (854)
+|+.||++++|+..||+|++++|||+| |.|+|++...|..+.+. .|+++++.|+++
T Consensus 272 ~~~~~di~i~~~~~~~~~~~~~Ea~~~---------------------g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~ 330 (374)
T cd03801 272 LYAAADVFVLPSLYEGFGLVLLEAMAA---------------------GLPVVASDVGGIPEVVEDGETGLLVPPGDPEA 330 (374)
T ss_pred HHHhcCEEEecchhccccchHHHHHHc---------------------CCcEEEeCCCChhHHhcCCcceEEeCCCCHHH
Confidence 999999999999999999999999999 45999999988888874 489999999999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHH
Q 003042 496 VADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (854)
Q Consensus 496 ~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 538 (854)
++++|.++++.++..++...+......+.+++..+++++++.+
T Consensus 331 l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 331 LAEAILRLLDDPELRRRLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHHHHHcChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 9999999998776554444443335667799999999887654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-18 Score=193.01 Aligned_cols=273 Identities=20% Similarity=0.225 Sum_probs=182.8
Q ss_pred CeEEEeCcc-cchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHH------HHHhhcCCeEeecCHHHHHHHHHH
Q 003042 192 DYVWIHDYH-LMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEI------LKSLLNSDLIGFHTFDYARHFLSS 264 (854)
Q Consensus 192 D~vwihDyh-l~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~ei------l~~ll~~dligf~t~~~~~~Fl~~ 264 (854)
|+|++|+.. ....+.....+..+.++.+..|..++...... -+.+..+ -..+-.+|.+.+.+.........
T Consensus 89 dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~- 166 (375)
T cd03821 89 DIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPH-KALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR- 166 (375)
T ss_pred CEEEEecccchHHHHHHHHHHHhCCCEEEEcccccccccccc-chhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh-
Confidence 899999843 22233322223357889999997765433100 0011100 11223466666665433322211
Q ss_pred HHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccccCCH
Q 003042 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGI 341 (854)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~~KGi 341 (854)
.+...++.++|+|+|.+.+.... ... . ++.+ .++++++++||+++.||+
T Consensus 167 --------------------~~~~~~~~vi~~~~~~~~~~~~~---~~~--~---~~~~~~~~~~~~i~~~G~~~~~K~~ 218 (375)
T cd03821 167 --------------------LGLKAPIAVIPNGVDIPPFAALP---SRG--R---RRKFPILPDKRIILFLGRLHPKKGL 218 (375)
T ss_pred --------------------hCCcccEEEcCCCcChhccCcch---hhh--h---hhhccCCCCCcEEEEEeCcchhcCH
Confidence 12234678899999998775321 111 0 2322 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHH
Q 003042 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (854)
Q Consensus 342 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~ 421 (854)
..+++|+.++.+++|+++ |+++|... . .+. ..++.++.+ .+..+.+.+.|.++.+++..+|+
T Consensus 219 ~~li~a~~~l~~~~~~~~----l~i~G~~~---~-~~~---~~~~~~~~~-------~~~~~~v~~~g~~~~~~~~~~~~ 280 (375)
T cd03821 219 DLLIEAFAKLAERFPDWH----LVIAGPDE---G-GYR---AELKQIAAA-------LGLEDRVTFTGMLYGEDKAAALA 280 (375)
T ss_pred HHHHHHHHHhhhhcCCeE----EEEECCCC---c-chH---HHHHHHHHh-------cCccceEEEcCCCChHHHHHHHh
Confidence 999999999998888765 88777422 1 111 222222222 23445667788999999999999
Q ss_pred hCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC-C-ceEeCCCCHHHHHHH
Q 003042 422 IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-G-AIRVNPWNVDAVADA 499 (854)
Q Consensus 422 ~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~-ai~vnP~d~~~~A~a 499 (854)
.||++|+||..||||++++|||+| |.|+|+|..+|..+.+. + ++++ |.+.++++++
T Consensus 281 ~adv~v~ps~~e~~~~~~~Eama~---------------------G~PvI~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 338 (375)
T cd03821 281 DADLFVLPSHSENFGIVVAEALAC---------------------GTPVVTTDKVPWQELIEYGCGWVV-DDDVDALAAA 338 (375)
T ss_pred hCCEEEeccccCCCCcHHHHHHhc---------------------CCCEEEcCCCCHHHHhhcCceEEe-CCChHHHHHH
Confidence 999999999999999999999999 45999999988888773 3 4555 5566999999
Q ss_pred HHHHhcCCHHHHHHHHHHHhcc-ccccChHHHHHHHH
Q 003042 500 MDSALQMENQEKILRHEKHYKY-ISSHDVAYWAKSID 535 (854)
Q Consensus 500 i~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l 535 (854)
|.++++++ +++....++.+++ .+++++...+++++
T Consensus 339 i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 339 LRRALELP-QRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 99999988 4555555666666 56788888887765
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.2e-18 Score=200.14 Aligned_cols=282 Identities=13% Similarity=0.092 Sum_probs=184.5
Q ss_pred HHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChh-hhhcC----CChHHHHHHhhcCCeEe
Q 003042 177 KVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSE-IYRTL----PVRDEILKSLLNSDLIG 251 (854)
Q Consensus 177 ~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e-~~~~l----p~r~eil~~ll~~dlig 251 (854)
+.|.+++ . . .+.|+|.++--.... +.++ +..+.+++..++|.-.=+.. .-..- +.-+..++.+-.+|.|-
T Consensus 201 ~~f~~~L-~-~-~~~di~i~dr~~~~~-~~~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI 275 (500)
T TIGR02918 201 AYFLKQL-N-L-TKKDIIILDRSTGIG-QAVL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFI 275 (500)
T ss_pred HHHHHHH-h-C-CCCCEEEEcCCcccc-hHHH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEE
Confidence 4455554 2 2 234898887555433 4444 55668999999995321000 00000 11122233344467777
Q ss_pred ecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEE
Q 003042 252 FHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILG 331 (854)
Q Consensus 252 f~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~ 331 (854)
..|..-.+........ +.+...+|.++|+|++...+. +. ....+..|++
T Consensus 276 ~~S~~~~~~l~~~~~~----------------~~~~~~ki~viP~g~~~~~~~-----~~----------~~r~~~~il~ 324 (500)
T TIGR02918 276 TATDIQNQILKNQFKK----------------YYNIEPRIYTIPVGSLDELQY-----PE----------QERKPFSIIT 324 (500)
T ss_pred ECCHHHHHHHHHHhhh----------------hcCCCCcEEEEcCCCcccccC-----cc----------cccCCeEEEE
Confidence 6665443333221111 122234677899998754332 10 0123468999
Q ss_pred ecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCC
Q 003042 332 VDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL 411 (854)
Q Consensus 332 VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~ 411 (854)
|||+.+.||+..+++|+.++.+++|+++ |+++|. |++. +++++++.+. +....+.+.|..
T Consensus 325 vGrl~~~Kg~~~li~A~~~l~~~~p~~~----l~i~G~-----G~~~----~~l~~~i~~~-------~l~~~V~f~G~~ 384 (500)
T TIGR02918 325 ASRLAKEKHIDWLVKAVVKAKKSVPELT----FDIYGE-----GGEK----QKLQKIINEN-------QAQDYIHLKGHR 384 (500)
T ss_pred EeccccccCHHHHHHHHHHHHhhCCCeE----EEEEEC-----chhH----HHHHHHHHHc-------CCCCeEEEcCCC
Confidence 9999999999999999999999999765 777773 3433 3344444442 223455566643
Q ss_pred ChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCc-cccccCC---CceE
Q 003042 412 STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI-GCSPSLS---GAIR 487 (854)
Q Consensus 412 ~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~---~ai~ 487 (854)
++..+|+.||++|+||.+||||++++||||| |.|+|+|... |..+.+. +|++
T Consensus 385 ---~~~~~~~~adv~v~pS~~Egfgl~~lEAma~---------------------G~PVI~~dv~~G~~eiI~~g~nG~l 440 (500)
T TIGR02918 385 ---NLSEVYKDYELYLSASTSEGFGLTLMEAVGS---------------------GLGMIGFDVNYGNPTFIEDNKNGYL 440 (500)
T ss_pred ---CHHHHHHhCCEEEEcCccccccHHHHHHHHh---------------------CCCEEEecCCCCCHHHccCCCCEEE
Confidence 6889999999999999999999999999999 4599999986 6666662 4899
Q ss_pred eCC----CC----HHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHH
Q 003042 488 VNP----WN----VDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 488 vnP----~d----~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 540 (854)
|++ .| ++++|++|.++|+ + ..++...+..++..++++...-++++.+-+++
T Consensus 441 v~~~~~~~d~~~~~~~la~~I~~ll~-~-~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 441 IPIDEEEDDEDQIITALAEKIVEYFN-S-NDIDAFHEYSYQIAEGFLTANIIEKWKKLVRE 499 (500)
T ss_pred EeCCccccchhHHHHHHHHHHHHHhC-h-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 973 34 8999999999984 3 35666667777788889988888888766543
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.8e-19 Score=199.06 Aligned_cols=227 Identities=17% Similarity=0.231 Sum_probs=146.7
Q ss_pred hhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHH-HHcccCCCCeEEEEcCCCccchhhhhcCCc---ccceeecCcEEE
Q 003042 581 NKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSIL-NDLCNDPKNAVFIVSGRGKDSLGNWFSGVE---KLGLSAEHGYFT 656 (854)
Q Consensus 581 ~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL-~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~---~l~liaenG~~I 656 (854)
..+...+|++||||||++.. .++.++.....++ +++ .++|+.++++|||+...+..+...++ .-.+++.||+.|
T Consensus 5 ~~~~~~lI~sDLDGTLL~~~-~~~~~s~~~~~~l~~~~-~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I 82 (413)
T PLN02382 5 SGSPRLMIVSDLDHTMVDHH-DPENLSLLRFNALWEAE-YRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEI 82 (413)
T ss_pred cCCCCEEEEEcCCCcCcCCC-CccchhHHHHHHHHHHh-hcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEE
Confidence 34567899999999999821 1447776666666 887 89999999999999888777765442 122677799999
Q ss_pred EECCCcceEEccccccchHHHHHH---------HHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHH
Q 003042 657 RWSKNSAWEICSLTRDFDWKEIAE---------PVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLEN 727 (854)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~v~---------~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~ 727 (854)
.+.+... .+..|...+. +.+..|.........+.+...+.+...+. ...++...+.+
T Consensus 83 ~~~~~~~-------~d~~w~~~l~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~-------~~~~~~~~l~~ 148 (413)
T PLN02382 83 AYGESMV-------PDHGWVEYLNKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKK-------KAQEVIKELSE 148 (413)
T ss_pred EeCCCCc-------cChhHHHHHhccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechH-------HhHHHHHHHHH
Confidence 8754221 1122322222 11111211111111122222333322211 12234445555
Q ss_pred HhcCC---CEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccE
Q 003042 728 VLANE---PVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEV 804 (854)
Q Consensus 728 ~l~~~---~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~ 804 (854)
.+... ...+.++..++||+|+++|||.|+++|++++...|++++++++|||+.||++||+.++.
T Consensus 149 ~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~------------- 215 (413)
T PLN02382 149 RLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDV------------- 215 (413)
T ss_pred HHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCC-------------
Confidence 45322 23456788999999999999999999999985558899999999999999999999983
Q ss_pred EEEEecCCC----c--------ccceEeC---CHhHHHHHHHHHHhc
Q 003042 805 FACTVGQKP----S--------MAKYYLD---DTAEVINLLEGLATE 836 (854)
Q Consensus 805 ~aV~vG~~~----s--------~A~y~l~---~~~eV~~~L~~l~~~ 836 (854)
++|+||++. . .|++++. +.+++.+.|+++.-.
T Consensus 216 ~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~f~l~ 262 (413)
T PLN02382 216 YGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGHFNLG 262 (413)
T ss_pred CEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHHhCCC
Confidence 267778752 2 2355533 478899999987643
|
|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.7e-19 Score=200.18 Aligned_cols=187 Identities=12% Similarity=-0.024 Sum_probs=127.1
Q ss_pred EEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCc--cccCCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 003042 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDM--DLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (854)
Q Consensus 289 ~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRl--d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 366 (854)
.++.++|+|||++.+... ++. ...+ ...++++|++|+|. ++.||+..+++|+.++ .+ ++.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~---~~~----~~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAIL---AEL----PPVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHT 276 (405)
T ss_pred CCEEEeCCCcCccccccc---ccc----cccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEE
Confidence 367889999997543211 000 0001 12467789999994 4789999999999875 23 356888
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeee
Q 003042 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (854)
Q Consensus 367 i~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~ 446 (854)
+|... ... . ..++++....+..++..+|+.||+||+||..||||+|++|||||
T Consensus 277 vG~g~-----~~~--~-------------------~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~- 329 (405)
T PRK10125 277 FGKFS-----PFT--A-------------------GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSI- 329 (405)
T ss_pred EcCCC-----ccc--c-------------------cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHc-
Confidence 87421 100 0 12444443346789999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEecCccccccCC--CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhc-ccc
Q 003042 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYK-YIS 523 (854)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~-~v~ 523 (854)
|.|+|+|+.+|+.+.+. +|++|+|.|++++|+++...+.... .....+..++ ...
T Consensus 330 --------------------G~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~~--~~~~~~~~r~~~~~ 387 (405)
T PRK10125 330 --------------------GVPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQAV--FGTTLAEFSQRSRA 387 (405)
T ss_pred --------------------CCCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHHh--hhhHHHHHHHHHHH
Confidence 46999999999887773 4999999999999986543221110 0000122233 345
Q ss_pred ccChHHHHHHHHHHHH
Q 003042 524 SHDVAYWAKSIDQDLE 539 (854)
Q Consensus 524 ~~~~~~W~~~~l~~l~ 539 (854)
.++....++++++-.+
T Consensus 388 ~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 388 AYSGQQMLEEYVNFYQ 403 (405)
T ss_pred hCCHHHHHHHHHHHHH
Confidence 6899998888876543
|
|
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.3e-18 Score=191.24 Aligned_cols=282 Identities=18% Similarity=0.187 Sum_probs=190.1
Q ss_pred HHhcCCCCCeEEEeCcc-cc---hHHHHHH-hccCCCeEEEEecCCCCChhhhhcCCChHHHHH-HhhcCCeEeecCHHH
Q 003042 184 MEVINPDEDYVWIHDYH-LM---VLPSFLR-KRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILK-SLLNSDLIGFHTFDY 257 (854)
Q Consensus 184 ~~~~~~~~D~vwihDyh-l~---llp~~lr-~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~-~ll~~dligf~t~~~ 257 (854)
+...+| |+|++|+.+ ++ ......+ .+..+.++.+.+|.+.|....+ ....+.+ -+-.+|.|-+.+.+.
T Consensus 72 ~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~----~~~~~~~~~~~~~d~ii~~s~~~ 145 (366)
T cd03822 72 IRLSGP--DVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPRP----GDRALLRLLLRRADAVIVMSSEL 145 (366)
T ss_pred HhhcCC--CEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccch----hhhHHHHHHHhcCCEEEEeeHHH
Confidence 344466 899998732 21 1111111 1236789999999862222111 1112222 234589998887555
Q ss_pred HHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccc
Q 003042 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDL 337 (854)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~ 337 (854)
++++.... . ..++.++|+|++...+.... . . +......++.+|+++||+.+
T Consensus 146 ~~~~~~~~--------------------~-~~~~~~i~~~~~~~~~~~~~------~-~-~~~~~~~~~~~i~~~G~~~~ 196 (366)
T cd03822 146 LRALLLRA--------------------Y-PEKIAVIPHGVPDPPAEPPE------S-L-KALGGLDGRPVLLTFGLLRP 196 (366)
T ss_pred HHHHHhhc--------------------C-CCcEEEeCCCCcCcccCCch------h-h-HhhcCCCCCeEEEEEeeccC
Confidence 55554310 0 23678899999977654211 1 1 11112256789999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCcc-EEEEcCCCChhhH
Q 003042 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP-IVIIKEPLSTQDK 416 (854)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~p-v~~~~~~~~~~el 416 (854)
.||+..+++|++.+.+++|+++ |+.+|... +.......+..+++.+ .+..+ |.++++.++.+++
T Consensus 197 ~K~~~~ll~a~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~~~i~~-------~~~~~~v~~~~~~~~~~~~ 261 (366)
T cd03822 197 YKGLELLLEALPLLVAKHPDVR----LLVAGETH----PDLERYRGEAYALAER-------LGLADRVIFINRYLPDEEL 261 (366)
T ss_pred CCCHHHHHHHHHHHHhhCCCeE----EEEeccCc----cchhhhhhhhHhHHHh-------cCCCCcEEEecCcCCHHHH
Confidence 9999999999999998887655 88777422 1111111111122222 22333 4444555999999
Q ss_pred HHHHHhCcEEEEccCcc--CCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC---CCceEeCCC
Q 003042 417 VPYYAIAECCVVNCVRD--GMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL---SGAIRVNPW 491 (854)
Q Consensus 417 ~aly~~ADv~vv~S~~E--G~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~ai~vnP~ 491 (854)
..+|+.||++++||..| |++++++|||+| |.|+|+|..+| .+.+ ..|+++++.
T Consensus 262 ~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~---------------------G~PvI~~~~~~-~~~i~~~~~g~~~~~~ 319 (366)
T cd03822 262 PELFSAADVVVLPYRSADQTQSGVLAYAIGF---------------------GKPVISTPVGH-AEEVLDGGTGLLVPPG 319 (366)
T ss_pred HHHHhhcCEEEecccccccccchHHHHHHHc---------------------CCCEEecCCCC-hheeeeCCCcEEEcCC
Confidence 99999999999999999 999999999999 45899999888 6666 348999999
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHH
Q 003042 492 NVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (854)
Q Consensus 492 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 538 (854)
|+++++++|.++++.+.. +....++.++++.++++..+++++.+.+
T Consensus 320 d~~~~~~~l~~l~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 320 DPAALAEAIRRLLADPEL-AQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred CHHHHHHHHHHHHcChHH-HHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 999999999999987654 4455667788888899999999887654
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=4e-18 Score=188.10 Aligned_cols=281 Identities=16% Similarity=0.151 Sum_probs=190.9
Q ss_pred HhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHh-hcCCeEeecCHHHHHHHHH
Q 003042 185 EVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL-LNSDLIGFHTFDYARHFLS 263 (854)
Q Consensus 185 ~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~l-l~~dligf~t~~~~~~Fl~ 263 (854)
+..+| |+|++|+++...+..+........++.+..|..++...-+ ..+....+.+-+ -.+|.+-..+......+..
T Consensus 77 ~~~~~--div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~ 153 (365)
T cd03807 77 RRLRP--DVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLGKK-STRLVARLRRLLSSFIPLIVANSAAAAEYHQA 153 (365)
T ss_pred HhhCC--CEEEeccccccHHHHHHHHhcCCCcEEEEecCCcccccch-hHhHHHHHHHHhccccCeEEeccHHHHHHHHH
Confidence 44566 8999999997777776666546788999999776543200 001111122221 2356664444433333322
Q ss_pred HHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccccCC
Q 003042 264 SCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKG 340 (854)
Q Consensus 264 ~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~~KG 340 (854)
. + ....++.++|+|+|...+..... .....++++ .++.+|+++||+++.||
T Consensus 154 ~-----~---------------~~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K~ 207 (365)
T cd03807 154 I-----G---------------YPPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQKD 207 (365)
T ss_pred c-----C---------------CChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhcC
Confidence 0 1 11235678899999887653211 112233344 46788999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHH
Q 003042 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (854)
Q Consensus 341 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly 420 (854)
+..+++|+..+.+++|+++ |+.+|... .....+.... .+ .+..+.+.+.+. .+|+..+|
T Consensus 208 ~~~li~a~~~l~~~~~~~~----l~i~G~~~-----~~~~~~~~~~---~~-------~~~~~~v~~~g~--~~~~~~~~ 266 (365)
T cd03807 208 HATLLRAAALLLKKFPNAR----LLLVGDGP-----DRANLELLAL---KE-------LGLEDKVILLGE--RSDVPALL 266 (365)
T ss_pred HHHHHHHHHHHHHhCCCeE----EEEecCCc-----chhHHHHHHH---Hh-------cCCCceEEEccc--cccHHHHH
Confidence 9999999999988887654 77777432 2122222211 01 222334445553 57899999
Q ss_pred HhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC-CceEeCCCCHHHHHHH
Q 003042 421 AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-GAIRVNPWNVDAVADA 499 (854)
Q Consensus 421 ~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~vnP~d~~~~A~a 499 (854)
+.||++++||..||+|++++|||+| +.|+|+|+.+|..+.+. .|+++++.|+++++++
T Consensus 267 ~~adi~v~ps~~e~~~~~~~Ea~a~---------------------g~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~ 325 (365)
T cd03807 267 NALDVFVLSSLSEGFPNVLLEAMAC---------------------GLPVVATDVGDNAELVGDTGFLVPPGDPEALAEA 325 (365)
T ss_pred HhCCEEEeCCccccCCcHHHHHHhc---------------------CCCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHH
Confidence 9999999999999999999999999 45999999999888875 4899999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHhccc-cccChHHHHHHHHHH
Q 003042 500 MDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQD 537 (854)
Q Consensus 500 i~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~ 537 (854)
|.+++++++ ++....+..++++ ..+++...++++.+.
T Consensus 326 i~~l~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 326 IEALLADPA-LRQALGEAARERIEENFSIEAMVEAYEEL 363 (365)
T ss_pred HHHHHhChH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999874 4444555566665 458988888887764
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.8e-18 Score=190.32 Aligned_cols=270 Identities=19% Similarity=0.264 Sum_probs=185.4
Q ss_pred HHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCC---ChH----HHH-HHhhcCCeEeecC
Q 003042 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLP---VRD----EIL-KSLLNSDLIGFHT 254 (854)
Q Consensus 183 i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp---~r~----eil-~~ll~~dligf~t 254 (854)
+.+..+| |+|++|+...+........+..++++.+.+|.+|+....+...+ ... .+. ..+-.+|.+-+.+
T Consensus 79 ~~~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s 156 (374)
T cd03817 79 ILKELGP--DIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPS 156 (374)
T ss_pred HHhhcCC--CEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEecc
Confidence 3455666 89999987655544444444457899999998876322111111 011 111 2234578887777
Q ss_pred HHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEE
Q 003042 255 FDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILG 331 (854)
Q Consensus 255 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~ 331 (854)
......+.. .+...++.++|+|+|...+.... ... .++.+ .++++|++
T Consensus 157 ~~~~~~~~~---------------------~~~~~~~~vi~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~i~~ 207 (374)
T cd03817 157 EKIADLLRE---------------------YGVKRPIEVIPTGIDLDRFEPVD----GDD----ERRKLGIPEDEPVLLY 207 (374)
T ss_pred HHHHHHHHh---------------------cCCCCceEEcCCccchhccCccc----hhH----HHHhcCCCCCCeEEEE
Confidence 754444322 01122478899999987765321 111 12222 46788999
Q ss_pred ecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCC
Q 003042 332 VDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL 411 (854)
Q Consensus 332 VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~ 411 (854)
+||+.+.||+..+++|++.+.++.+++ .|+.+|. ++... ++.+++.+. +..+.+.+.+.+
T Consensus 208 ~G~~~~~k~~~~l~~~~~~~~~~~~~~----~l~i~G~-----~~~~~----~~~~~~~~~-------~~~~~v~~~g~~ 267 (374)
T cd03817 208 VGRLAKEKNIDFLIRAFARLLKEEPDV----KLVIVGD-----GPERE----ELEELAREL-------GLADRVIFTGFV 267 (374)
T ss_pred EeeeecccCHHHHHHHHHHHHHhCCCe----EEEEEeC-----CchHH----HHHHHHHHc-------CCCCcEEEeccC
Confidence 999999999999999999998876654 4777773 22222 333333332 233456677889
Q ss_pred ChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEe
Q 003042 412 STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRV 488 (854)
Q Consensus 412 ~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~v 488 (854)
+.+++..+|+.||+++.||..||+|++.+|||+| |.|+|++..+|..+.+. .|+++
T Consensus 268 ~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~---------------------g~PvI~~~~~~~~~~i~~~~~g~~~ 326 (374)
T cd03817 268 PREELPDYYKAADLFVFASTTETQGLVLLEAMAA---------------------GLPVVAVDAPGLPDLVADGENGFLF 326 (374)
T ss_pred ChHHHHHHHHHcCEEEecccccCcChHHHHHHHc---------------------CCcEEEeCCCChhhheecCceeEEe
Confidence 9999999999999999999999999999999999 45899999888887773 48999
Q ss_pred CCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccC
Q 003042 489 NPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHD 526 (854)
Q Consensus 489 nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 526 (854)
++.|. +++++|.+++++++.. +...+..++++.+++
T Consensus 327 ~~~~~-~~~~~i~~l~~~~~~~-~~~~~~~~~~~~~~~ 362 (374)
T cd03817 327 PPGDE-ALAEALLRLLQDPELR-RRLSKNAEESAEKFS 362 (374)
T ss_pred CCCCH-HHHHHHHHHHhChHHH-HHHHHHHHHHHHHHH
Confidence 99888 9999999999887654 455556666666555
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.4e-18 Score=187.85 Aligned_cols=283 Identities=19% Similarity=0.200 Sum_probs=198.7
Q ss_pred hcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHH
Q 003042 186 VINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSC 265 (854)
Q Consensus 186 ~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~ 265 (854)
..++ |+|++|......+...+..+..++++.+..|.+++....... ..+.-.-..+-.+|.+-+.+......|.+..
T Consensus 91 ~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 167 (377)
T cd03798 91 RFRP--DLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG 167 (377)
T ss_pred cCCC--CEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc
Confidence 4455 899999655555444444445568899999987764322211 1233333445678999998877666655310
Q ss_pred HhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHH
Q 003042 266 SRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKF 345 (854)
Q Consensus 266 ~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l 345 (854)
....++.++|+|+|...+..... .....+ ....++++++++||+++.||+..++
T Consensus 168 --------------------~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li 221 (377)
T cd03798 168 --------------------IDPEKVTVIPNGVDTERFSPADR-----AEARKL-GLPEDKKVILFVGRLVPRKGIDYLI 221 (377)
T ss_pred --------------------CCCCceEEcCCCcCcccCCCcch-----HHHHhc-cCCCCceEEEEeccCccccCHHHHH
Confidence 11235778999999887653211 111111 1124678999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcE
Q 003042 346 LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAEC 425 (854)
Q Consensus 346 ~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv 425 (854)
+|++.+.+++|++ .|+.+|. ++....+++.++ + .+..+.+.+.+.++.+++..+|+.||+
T Consensus 222 ~~~~~~~~~~~~~----~l~i~g~-----~~~~~~~~~~~~----~-------~~~~~~v~~~g~~~~~~~~~~~~~ad~ 281 (377)
T cd03798 222 EALARLLKKRPDV----HLVIVGD-----GPLREALEALAA----E-------LGLEDRVTFLGAVPHEEVPAYYAAADV 281 (377)
T ss_pred HHHHHHHhcCCCe----EEEEEcC-----CcchHHHHHHHH----h-------cCCcceEEEeCCCCHHHHHHHHHhcCe
Confidence 9999998877654 4776663 233233333332 2 334456677788999999999999999
Q ss_pred EEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHHHHHHH
Q 003042 426 CVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDS 502 (854)
Q Consensus 426 ~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~ 502 (854)
++.||..||+|++++|||+| |.|+|+|+.+|..+.+. .|+++++.|+++++++|.+
T Consensus 282 ~i~~~~~~~~~~~~~Ea~~~---------------------G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~ 340 (377)
T cd03798 282 FVLPSLREGFGLVLLEAMAC---------------------GLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILR 340 (377)
T ss_pred eecchhhccCChHHHHHHhc---------------------CCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHH
Confidence 99999999999999999999 45999999988877773 3589999999999999999
Q ss_pred HhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHH
Q 003042 503 ALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 503 aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 540 (854)
+++++.. +...+........+++..+++++.+.+++
T Consensus 341 ~~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 376 (377)
T cd03798 341 LLADPWL--RLGRAARRRVAERFSWENVAERLLELYRE 376 (377)
T ss_pred HhcCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 9998765 33333444455668888888888776653
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.8e-18 Score=193.00 Aligned_cols=282 Identities=18% Similarity=0.081 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCC-ChhhhhcCC---ChHHHHHHhhc
Q 003042 171 AYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFP-SSEIYRTLP---VRDEILKSLLN 246 (854)
Q Consensus 171 ~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP-~~e~~~~lp---~r~eil~~ll~ 246 (854)
...+.-+.|-+++.. .+ ..|+|.+|-.+.... .+.......+...++|...- ....-...+ ..+.++..+-.
T Consensus 82 ~~~~l~~~~l~~l~~-~~-~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (372)
T cd04949 82 NEEELFAFFLDELNK-DT-KPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDK 157 (372)
T ss_pred CHHHHHHHHHHHHhc-CC-CCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhh
Confidence 344444555555543 22 348999987776655 23333345667788885321 110000011 22445555667
Q ss_pred CCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCC
Q 003042 247 SDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGK 326 (854)
Q Consensus 247 ~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~ 326 (854)
+|.|.+.+..-.+.+.... + ...++.++|+|++...+.... .....+
T Consensus 158 ~d~ii~~s~~~~~~l~~~~----~----------------~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~ 204 (372)
T cd04949 158 VDGVIVATEQQKQDLQKQF----G----------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQRKP 204 (372)
T ss_pred CCEEEEccHHHHHHHHHHh----C----------------CCCceEEEcccccChhhcccc-------------hhhcCC
Confidence 8989888876666654311 1 111267899999987764210 011356
Q ss_pred EEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEE
Q 003042 327 IVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVI 406 (854)
Q Consensus 327 ~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~ 406 (854)
..++++||+.+.||+..+++|+.++.+++|+++ |+++|.. ++...++..+ .+ .+....+.
T Consensus 205 ~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~----l~i~G~g-----~~~~~~~~~~----~~-------~~~~~~v~ 264 (372)
T cd04949 205 HKIITVARLAPEKQLDQLIKAFAKVVKQVPDAT----LDIYGYG-----DEEEKLKELI----EE-------LGLEDYVF 264 (372)
T ss_pred CeEEEEEccCcccCHHHHHHHHHHHHHhCCCcE----EEEEEeC-----chHHHHHHHH----HH-------cCCcceEE
Confidence 689999999999999999999999999999876 7777743 2223333332 22 23334556
Q ss_pred EcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCc-cccccCC--
Q 003042 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI-GCSPSLS-- 483 (854)
Q Consensus 407 ~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~-- 483 (854)
+.|. .+++..+|+.||++|+||..||||++.+|||+| |.|+|+|+.. |..+.+.
T Consensus 265 ~~g~--~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~---------------------G~PvI~~~~~~g~~~~v~~~ 321 (372)
T cd04949 265 LKGY--TRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSH---------------------GLPVISYDVNYGPSEIIEDG 321 (372)
T ss_pred EcCC--CCCHHHHHhhhhEEEecccccccChHHHHHHhC---------------------CCCEEEecCCCCcHHHcccC
Confidence 6663 578999999999999999999999999999999 4589999877 6666662
Q ss_pred -CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHH
Q 003042 484 -GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKS 533 (854)
Q Consensus 484 -~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~ 533 (854)
.|++++|.|++++|++|..+++.++ .+....+..++...++++..++++
T Consensus 322 ~~G~lv~~~d~~~la~~i~~ll~~~~-~~~~~~~~a~~~~~~~s~~~~~~~ 371 (372)
T cd04949 322 ENGYLVPKGDIEALAEAIIELLNDPK-LLQKFSEAAYENAERYSEENVWEK 371 (372)
T ss_pred CCceEeCCCcHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHhhHHHHHhc
Confidence 4899999999999999999998774 444445555555667777766654
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-18 Score=201.63 Aligned_cols=201 Identities=17% Similarity=0.138 Sum_probs=131.3
Q ss_pred hcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECC
Q 003042 582 KTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSK 660 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~ 660 (854)
.+++|+|++|+||||++ .+..+++.++++|+++ +++|+.|++||||+...+..++..+. ..+++++||+.|+.+.
T Consensus 413 ~~~~KLIfsDLDGTLLd---~d~~i~~~t~eAL~~L-~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~ 488 (694)
T PRK14502 413 GQFKKIVYTDLDGTLLN---PLTYSYSTALDALRLL-KDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPK 488 (694)
T ss_pred CceeeEEEEECcCCCcC---CCCccCHHHHHHHHHH-HHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECC
Confidence 46789999999999999 6677888999999999 89999999999999999988886653 3468999999999865
Q ss_pred Cc-------------ceEEccccccchHHHHHHHHHHHHh---c---cCCcceEecccceEEEe----ecc--------C
Q 003042 661 NS-------------AWEICSLTRDFDWKEIAEPVMKLYT---E---TTDGSFIEDKETAIVWH----HQH--------A 709 (854)
Q Consensus 661 ~~-------------~~~~~~~~~~~~~~~~v~~~~~~y~---~---~~~g~~ie~k~~~l~~~----~~~--------~ 709 (854)
+. .+..........+.+.+..+.+.+. . ...+.++.... ...+. +.. +
T Consensus 489 ~~~~~~~~~~~~~~~~iI~~~~l~~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~-d~~~~ei~~~TgL~~~~a~~a 567 (694)
T PRK14502 489 DYFRLPFAYDRVAGNYLVIELGMAYKDIRHILKKALAEACTEIENSEKAGNIFITSFG-DMSVEDVSRLTDLNLKQAELA 567 (694)
T ss_pred CcccccccccccCCCeEEEEcCCCHHHHHHHHHHHHHhhcceeeeeeccCcEEEecCC-cccHHHHHHhhCCCHHHHHHH
Confidence 41 0111011111123333332222110 0 00111111110 00000 000 0
Q ss_pred C-----CccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEE--eCCccc
Q 003042 710 D-----PHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCI--GDDRSD 782 (854)
Q Consensus 710 d-----~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlai--GDs~ND 782 (854)
. ..+......+.++.+.+.+......+..+..++||. +++|||.|+++|++.+ |++.+++++| ||+.||
T Consensus 568 ~~Re~seKIl~~gd~e~Leel~~~L~~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~~---gI~~~eViafalGDs~ND 643 (694)
T PRK14502 568 KQREYSETVHIEGDKRSTNIVLNHIQQSGLEYSFGGRFYEVT-GGNDKGKAIKILNELF---RLNFGNIHTFGLGDSEND 643 (694)
T ss_pred hhccCceeEEEcCCHHHHHHHHHHHHHcCcEEEECCEEEEeC-CCCCHHHHHHHHHHHh---CCCccceEEEEcCCcHhh
Confidence 0 000001112344555555554455666699999999 5999999999999999 9999999999 999999
Q ss_pred HHHHHHhhh
Q 003042 783 EDMFESIEQ 791 (854)
Q Consensus 783 ~~Mf~~ag~ 791 (854)
++||++++.
T Consensus 644 isMLe~Ag~ 652 (694)
T PRK14502 644 YSMLETVDS 652 (694)
T ss_pred HHHHHhCCc
Confidence 999999996
|
|
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.1e-18 Score=188.19 Aligned_cols=274 Identities=18% Similarity=0.150 Sum_probs=190.5
Q ss_pred HhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCCh----HHHHHH-hhcCCeEeecCHHHHH
Q 003042 185 EVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR----DEILKS-LLNSDLIGFHTFDYAR 259 (854)
Q Consensus 185 ~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r----~eil~~-ll~~dligf~t~~~~~ 259 (854)
+..+| |+|++|......+...+..+..++++.+++|..||..-........ ..+.+. .-.+|.+-+.+.....
T Consensus 80 ~~~~p--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 157 (364)
T cd03814 80 DAFAP--DVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLAD 157 (364)
T ss_pred HhcCC--CEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHH
Confidence 55677 8999996654433333333345788999999888733221111111 122222 2357888887776655
Q ss_pred HHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc--CCCEEEEEecCccc
Q 003042 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVDDMDL 337 (854)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~iil~VdRld~ 337 (854)
.+.. .+ ..++.++|+|+|...|...... ...++++ .++++++++||+.+
T Consensus 158 ~~~~--------------------~~--~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~G~~~~ 208 (364)
T cd03814 158 ELRA--------------------RG--FRRVRLWPRGVDTELFHPRRRD-------EALRARLGPPDRPVLLYVGRLAP 208 (364)
T ss_pred HHhc--------------------cC--CCceeecCCCccccccCccccc-------HHHHHHhCCCCCeEEEEEecccc
Confidence 2221 00 1246788999998877532211 1112222 46788999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHH
Q 003042 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (854)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~ 417 (854)
.||+..+++|+.++.++ |+++ |+.+|. +++...++ +..+-+.+.+.++.+++.
T Consensus 209 ~k~~~~~i~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~-----------------~~~~~v~~~g~~~~~~~~ 261 (364)
T cd03814 209 EKNLEALLDADLPLRRR-PPVR----LVIVGD-----GPARARLE-----------------ARYPNVHFLGFLDGEELA 261 (364)
T ss_pred ccCHHHHHHHHHHhhhc-CCce----EEEEeC-----CchHHHHh-----------------ccCCcEEEEeccCHHHHH
Confidence 99999999999999876 6654 777773 22222222 011234455668999999
Q ss_pred HHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHH
Q 003042 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVD 494 (854)
Q Consensus 418 aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~ 494 (854)
.+|+.||+++.||..||+|++++|||+| |.|+|+|+.+|..+.+. .|++++|.|.+
T Consensus 262 ~~~~~~d~~l~~s~~e~~~~~~lEa~a~---------------------g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~ 320 (364)
T cd03814 262 AAYASADVFVFPSRTETFGLVVLEAMAS---------------------GLPVVAPDAGGPADIVTDGENGLLVEPGDAE 320 (364)
T ss_pred HHHHhCCEEEECcccccCCcHHHHHHHc---------------------CCCEEEcCCCCchhhhcCCcceEEcCCCCHH
Confidence 9999999999999999999999999999 45999999999888874 48999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHH
Q 003042 495 AVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (854)
Q Consensus 495 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 538 (854)
+++++|.++++.++ ++....+..++.+.++++..+++++++.+
T Consensus 321 ~l~~~i~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 321 AFAAALAALLADPE-LRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHHHHHcCHH-HHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 99999999998765 44555566677778899999998887643
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.6e-18 Score=187.43 Aligned_cols=278 Identities=15% Similarity=0.208 Sum_probs=194.5
Q ss_pred hcCCCCCeEEEeC-cccchHHHHHHhccCCCeEEEEecCCCCChhhhhcC-CC-------hHHHH-HHhhcCCeEeecCH
Q 003042 186 VINPDEDYVWIHD-YHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTL-PV-------RDEIL-KSLLNSDLIGFHTF 255 (854)
Q Consensus 186 ~~~~~~D~vwihD-yhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~l-p~-------r~eil-~~ll~~dligf~t~ 255 (854)
..+| |+|++|. ..+..++....++..+.++.+.+|..||........ .. ...+. ..+..+|.+-+.+.
T Consensus 97 ~~~~--D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~ 174 (394)
T cd03794 97 RRRP--DVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISP 174 (394)
T ss_pred ccCC--CEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECH
Confidence 3445 8999998 445566666666666899999999988854332211 11 11111 23456899999988
Q ss_pred HHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCc
Q 003042 256 DYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDM 335 (854)
Q Consensus 256 ~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRl 335 (854)
..++.|.. .+ ....++.++|+|++...+...... ..... .....++.+|+++||+
T Consensus 175 ~~~~~~~~-----~~---------------~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~i~~~G~~ 229 (394)
T cd03794 175 GMREYLVR-----RG---------------VPPEKISVIPNGVDLELFKPPPAD----ESLRK-ELGLDDKFVVLYAGNI 229 (394)
T ss_pred HHHHHHHh-----cC---------------CCcCceEEcCCCCCHHHcCCccch----hhhhh-ccCCCCcEEEEEecCc
Confidence 87776651 01 122367889999998876532110 00111 1122577899999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhh
Q 003042 336 DLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQD 415 (854)
Q Consensus 336 d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~e 415 (854)
.+.||+..+++|+.++.+. |++ .|+++|. ++....+++.+.. .+...+++++ .++.++
T Consensus 230 ~~~k~~~~l~~~~~~l~~~-~~~----~l~i~G~-----~~~~~~~~~~~~~-----------~~~~~v~~~g-~~~~~~ 287 (394)
T cd03794 230 GRAQGLDTLLEAAALLKDR-PDI----RFLIVGD-----GPEKEELKELAKA-----------LGLDNVTFLG-RVPKEE 287 (394)
T ss_pred ccccCHHHHHHHHHHHhhc-CCe----EEEEeCC-----cccHHHHHHHHHH-----------cCCCcEEEeC-CCChHH
Confidence 9999999999999998776 554 4777763 3333333333211 2233455555 899999
Q ss_pred HHHHHHhCcEEEEccCccCC-----CCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceE
Q 003042 416 KVPYYAIAECCVVNCVRDGM-----NLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIR 487 (854)
Q Consensus 416 l~aly~~ADv~vv~S~~EG~-----~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~ 487 (854)
+.++|+.||++++||..|++ +++.+|||+| |.|+|+|..+|..+.+. .|++
T Consensus 288 ~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~---------------------G~pvi~~~~~~~~~~~~~~~~g~~ 346 (394)
T cd03794 288 LPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAA---------------------GKPVLASVDGESAELVEEAGAGLV 346 (394)
T ss_pred HHHHHHhhCeeEEeccCcccccccCchHHHHHHHC---------------------CCcEEEecCCCchhhhccCCcceE
Confidence 99999999999999999876 5557999999 45999999999988883 4899
Q ss_pred eCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhcccc-ccChHHHHHHH
Q 003042 488 VNPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSI 534 (854)
Q Consensus 488 vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~ 534 (854)
+++.|+++++++|.+++..++ ++....+..++++. .+++..+++++
T Consensus 347 ~~~~~~~~l~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 347 VPPGDPEALAAAILELLDDPE-ERAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred eCCCCHHHHHHHHHHHHhChH-HHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 999999999999999996554 55555566666666 78999888875
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-18 Score=190.47 Aligned_cols=193 Identities=15% Similarity=0.188 Sum_probs=141.5
Q ss_pred eccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCC
Q 003042 294 LPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARS 373 (854)
Q Consensus 294 ~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~ 373 (854)
+|.|||++.|.+... ...+.++++...+.+..++++|||+++.||+..+++|++++.+++|++..++.|+.+|.
T Consensus 118 I~~GVD~~~f~p~~~--~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---- 191 (335)
T PHA01633 118 VFHGINFKIVENAEK--LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---- 191 (335)
T ss_pred eeCCCChhhcCccch--hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----
Confidence 467999998863210 01112222222335677899999999999999999999999999998876777776651
Q ss_pred ChhHHHHHHHHHHHHHHHHhhccCCCCCc-cEEEEc--CCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCC
Q 003042 374 SGKDVQDLLSDTNRIAEEINLNFGKPGYE-PIVIIK--EPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSP 450 (854)
Q Consensus 374 ~~~~~~~l~~~v~~~v~~In~~~~~~~~~-pv~~~~--~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~ 450 (854)
. .+ .+ .+.. .|.++. +.++.+++.++|+.||+||+||..||||++++|||+|
T Consensus 192 --~---~~----~~-----------l~l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~----- 246 (335)
T PHA01633 192 --K---QF----TQ-----------LEVPANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAM----- 246 (335)
T ss_pred --H---HH----HH-----------cCCCCcEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHc-----
Confidence 1 11 11 1111 255543 6678899999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCceEEEecCccccccCCC---------------------ceEeCCCCHHHHHHHHHHHhcCCHH
Q 003042 451 VLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSG---------------------AIRVNPWNVDAVADAMDSALQMENQ 509 (854)
Q Consensus 451 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~---------------------ai~vnP~d~~~~A~ai~~aL~m~~~ 509 (854)
|.|+|+|..+|..+...+ |+.++++|++++|++|.+++.+...
T Consensus 247 ----------------G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~ 310 (335)
T PHA01633 247 ----------------GTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQDR 310 (335)
T ss_pred ----------------CCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccCh
Confidence 458999988776664321 4577889999999999999887643
Q ss_pred HHHHHHHHHhccccccChHHHHHHHH
Q 003042 510 EKILRHEKHYKYISSHDVAYWAKSID 535 (854)
Q Consensus 510 er~~r~~~~~~~v~~~~~~~W~~~~l 535 (854)
+ .|..+.++..+++++..-+++|+
T Consensus 311 ~--~~~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 311 E--ERSMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred h--hhhHHHHHHHHhcCHHHHHHHhh
Confidence 3 33445567778888888887765
|
|
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.5e-18 Score=190.87 Aligned_cols=240 Identities=15% Similarity=0.102 Sum_probs=165.9
Q ss_pred HHHHhcCCCCCeEEEeCcccchHHHHHHhcc-CCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHH
Q 003042 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRF-HRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARH 260 (854)
Q Consensus 182 ~i~~~~~~~~D~vwihDyhl~llp~~lr~~~-~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~ 260 (854)
++++..+| |+||+|+.....+..++++.. ...++..+.|..++....+. ...+..+|.+-..+..-.+.
T Consensus 78 ~~l~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~ 147 (359)
T PRK09922 78 KWLKETQP--DIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQ 147 (359)
T ss_pred HHHHhcCC--CEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHH
Confidence 45566677 899999987777666666543 23456667786554332211 11235688887777655544
Q ss_pred HHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCcc--cc
Q 003042 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMD--LF 338 (854)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld--~~ 338 (854)
+.. .|+. ..++.++|+|||.+.+... .+ ...++++++++||+. ..
T Consensus 148 ~~~-----~~~~---------------~~ki~vi~N~id~~~~~~~--~~-----------~~~~~~~i~~~Grl~~~~~ 194 (359)
T PRK09922 148 MMA-----RGIS---------------AQRISVIYNPVEIKTIIIP--PP-----------ERDKPAVFLYVGRLKFEGQ 194 (359)
T ss_pred HHH-----cCCC---------------HHHEEEEcCCCCHHHccCC--Cc-----------ccCCCcEEEEEEEEecccC
Confidence 432 1211 1246678999997654311 01 013467899999996 45
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCC--ChhhH
Q 003042 339 KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL--STQDK 416 (854)
Q Consensus 339 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~--~~~el 416 (854)
||+..+++|+.++. + ++.|+++|. |++.++++ +++++ .+....+.|.|.+ +.+++
T Consensus 195 k~~~~l~~a~~~~~---~----~~~l~ivG~-----g~~~~~l~----~~~~~-------~~l~~~v~f~G~~~~~~~~~ 251 (359)
T PRK09922 195 KNVKELFDGLSQTT---G----EWQLHIIGD-----GSDFEKCK----AYSRE-------LGIEQRIIWHGWQSQPWEVV 251 (359)
T ss_pred cCHHHHHHHHHhhC---C----CeEEEEEeC-----CccHHHHH----HHHHH-------cCCCCeEEEecccCCcHHHH
Confidence 99999999998762 2 456888873 34434443 34433 2333345566655 45899
Q ss_pred HHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEec-CccccccCC---CceEeCCCC
Q 003042 417 VPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSE-FIGCSPSLS---GAIRVNPWN 492 (854)
Q Consensus 417 ~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~~~l~---~ai~vnP~d 492 (854)
..+|+.||++|+||..||||++++||||| |.|+|+|+ .+|+.+.+. .|++++|.|
T Consensus 252 ~~~~~~~d~~v~~s~~Egf~~~~lEAma~---------------------G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d 310 (359)
T PRK09922 252 QQKIKNVSALLLTSKFEGFPMTLLEAMSY---------------------GIPCISSDCMSGPRDIIKPGLNGELYTPGN 310 (359)
T ss_pred HHHHhcCcEEEECCcccCcChHHHHHHHc---------------------CCCEEEeCCCCChHHHccCCCceEEECCCC
Confidence 99999999999999999999999999999 45999999 888887773 389999999
Q ss_pred HHHHHHHHHHHhcCCH
Q 003042 493 VDAVADAMDSALQMEN 508 (854)
Q Consensus 493 ~~~~A~ai~~aL~m~~ 508 (854)
++++|++|.++++.++
T Consensus 311 ~~~la~~i~~l~~~~~ 326 (359)
T PRK09922 311 IDEFVGKLNKVISGEV 326 (359)
T ss_pred HHHHHHHHHHHHhCcc
Confidence 9999999999998875
|
|
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.3e-18 Score=185.62 Aligned_cols=264 Identities=17% Similarity=0.122 Sum_probs=181.0
Q ss_pred HhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHH
Q 003042 185 EVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSS 264 (854)
Q Consensus 185 ~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~ 264 (854)
+..+| |+|++|+.+...+...+..+. .++.+..|..++....... +....-..+-.+|.+-+.+......+.
T Consensus 80 ~~~~~--d~i~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~~~~-- 151 (348)
T cd03820 80 KNNKP--DVVISFLTSLLTFLASLGLKI--VKLIVSEHNSPDAYKKRLR--RLLLRRLLYRRADAVVVLTEEDRALYY-- 151 (348)
T ss_pred cccCC--CEEEEcCchHHHHHHHHhhcc--ccEEEecCCCccchhhhhH--HHHHHHHHHhcCCEEEEeCHHHHHHhh--
Confidence 33566 899999888222222222221 4788889977654322110 110122334467888777765541110
Q ss_pred HHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHH
Q 003042 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLK 344 (854)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~ 344 (854)
.....++.++|+|++...+... ...+++.++++||+.+.||+..+
T Consensus 152 --------------------~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l 196 (348)
T cd03820 152 --------------------KKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLL 196 (348)
T ss_pred --------------------ccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHH
Confidence 1112357789999998765321 12467789999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCc
Q 003042 345 FLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAE 424 (854)
Q Consensus 345 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~AD 424 (854)
++|++++.+.+|+++ |+.+|. +++...+++ ++.+ .+..+.+.+.+. .+++..+|+.||
T Consensus 197 ~~~~~~l~~~~~~~~----l~i~G~-----~~~~~~~~~----~~~~-------~~~~~~v~~~g~--~~~~~~~~~~ad 254 (348)
T cd03820 197 IEAWAKIAKKHPDWK----LRIVGD-----GPEREALEA----LIKE-------LGLEDRVILLGF--TKNIEEYYAKAS 254 (348)
T ss_pred HHHHHHHHhcCCCeE----EEEEeC-----CCCHHHHHH----HHHH-------cCCCCeEEEcCC--cchHHHHHHhCC
Confidence 999999988787754 777763 223233333 3333 234455666665 789999999999
Q ss_pred EEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-C---CceEeCCCCHHHHHHHH
Q 003042 425 CCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S---GAIRVNPWNVDAVADAM 500 (854)
Q Consensus 425 v~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~---~ai~vnP~d~~~~A~ai 500 (854)
++++||..||||++++|||+| |.|+|+|+..|..+.+ . .|+++++.|+++++++|
T Consensus 255 ~~i~ps~~e~~~~~~~Ea~a~---------------------G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i 313 (348)
T cd03820 255 IFVLTSRFEGFPMVLLEAMAF---------------------GLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEAL 313 (348)
T ss_pred EEEeCccccccCHHHHHHHHc---------------------CCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHH
Confidence 999999999999999999999 4589999876655544 2 58999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHhccccccChHHHHHHHH
Q 003042 501 DSALQMENQEKILRHEKHYKYISSHDVAYWAKSID 535 (854)
Q Consensus 501 ~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 535 (854)
.++++.++.. +...+..++.++++++..++++|.
T Consensus 314 ~~ll~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 314 LRLMEDEELR-KRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHcCHHHH-HHHHHHHHHHHHHhCHHHHHHHhc
Confidence 9999876544 344444477788899988888764
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.9e-17 Score=186.16 Aligned_cols=353 Identities=16% Similarity=0.182 Sum_probs=202.3
Q ss_pred cccccccccccCCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhc-CCCCCeEEEeCcccchHHHHHHhccCCCeEEEEe
Q 003042 143 KHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVI-NPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFL 221 (854)
Q Consensus 143 ~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~-~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~fl 221 (854)
+.-||-.|+--.+. ....+++..-=.|.. ..|-....+.. ....|+++.||.+.-....+||++.++++..|+.
T Consensus 105 ~~~lW~~~~i~s~~---~~~d~nea~~fgy~~--~~~i~~~~~~~~~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTt 179 (590)
T cd03793 105 KGELWELCGIGSPE---GDRETNDAIIFGFLV--AWFLGEFAEQFDDEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTT 179 (590)
T ss_pred HHHHHHHcCCCCCC---CCCcchHHHHHHHHH--HHHHHHHHhhccCCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEe
Confidence 34589888875432 223444433323321 22222222221 1124999999999999999999888999999999
Q ss_pred cCCCCChhhhhcCCChHHHHHHhhcCCeEeecCH--------------HHHHHHHHH-----HHhhhCccccccCceeeE
Q 003042 222 HSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTF--------------DYARHFLSS-----CSRMLGLNYESKRGYIGL 282 (854)
Q Consensus 222 H~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~--------------~~~~~Fl~~-----~~r~lg~~~~~~~~~~~i 282 (854)
|..- +-|.|- +.+ ..|++. -+.++.++. +.++..++...... ..
T Consensus 180 HAT~----~GR~l~----------~g~-~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~~Ad~fttVS~it~~E--~~ 242 (590)
T cd03793 180 HATL----LGRYLC----------AGN-VDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAHCAHVFTTVSEITAYE--AE 242 (590)
T ss_pred cccc----cccccc----------cCC-cccchhhhhcchhhhhhcccchHHHHHHHHHHhhCCEEEECChHHHHH--HH
Confidence 9432 222210 000 111100 012222221 11111111000000 01
Q ss_pred EECCeEEEEEEeccccCchHHHhhhCC----chHHHHHHH-----HHHHc---CCCEEEEE-ecCccc-cCCHHHHHHHH
Q 003042 283 DYFGRTVSIKILPVGIHMGQFESIMSL----DVTGQKVKE-----LKEKF---DGKIVILG-VDDMDL-FKGISLKFLAM 348 (854)
Q Consensus 283 ~~~gr~~~i~v~p~GId~~~~~~~~~~----~~~~~~~~~-----l~~~~---~~~~iil~-VdRld~-~KGi~~~l~A~ 348 (854)
...++...+ |+|+|||++.|.+.... ....+++.+ ++.+| .+++++++ +||+++ .||++.+|+|+
T Consensus 243 ~Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl 321 (590)
T cd03793 243 HLLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEAL 321 (590)
T ss_pred HHhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHH
Confidence 122333333 89999999998643211 011122222 35554 36788888 799999 99999999999
Q ss_pred HHHHHhCCC-CCCcEEEEEEecCCCCCh---------hHHHHHHHHHHHHHHHHhhc---------c-------------
Q 003042 349 GQLLEQHPD-LRGKVVLVQITNPARSSG---------KDVQDLLSDTNRIAEEINLN---------F------------- 396 (854)
Q Consensus 349 ~~ll~~~p~-~~~~vvLvqi~~p~r~~~---------~~~~~l~~~v~~~v~~In~~---------~------------- 396 (854)
.++-..-.. -.+..|+..+..|+...+ .-.+++++.+..+..+|+.+ .
T Consensus 322 ~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~ 401 (590)
T cd03793 322 ARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKV 401 (590)
T ss_pred HHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHH
Confidence 987542111 112234444444554331 22345666666666666555 1
Q ss_pred ----------------------------------------C-CCCCccEEEEcCCCC------hhhHHHHHHhCcEEEEc
Q 003042 397 ----------------------------------------G-KPGYEPIVIIKEPLS------TQDKVPYYAIAECCVVN 429 (854)
Q Consensus 397 ----------------------------------------~-~~~~~pv~~~~~~~~------~~el~aly~~ADv~vv~ 429 (854)
. ..+...|+|....++ ..+...+|+.||+||+|
T Consensus 402 ~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~P 481 (590)
T cd03793 402 MLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFP 481 (590)
T ss_pred HHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEec
Confidence 0 011223444443332 23578899999999999
Q ss_pred cCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcccc----ccCC----CceEeC-------CCCHH
Q 003042 430 CVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS----PSLS----GAIRVN-------PWNVD 494 (854)
Q Consensus 430 S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l~----~ai~vn-------P~d~~ 494 (854)
|.+||||++++||||| |.|+|+|..+|.. +.+. .|+.|. +.+++
T Consensus 482 S~yE~fG~~~lEAma~---------------------G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~ 540 (590)
T cd03793 482 SYYEPWGYTPAECTVM---------------------GIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQ 540 (590)
T ss_pred cccCCCCcHHHHHHHc---------------------CCCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHH
Confidence 9999999999999999 4699999999984 3332 378887 45678
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHH
Q 003042 495 AVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (854)
Q Consensus 495 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 539 (854)
++|++|.+.++++..++........+....+++.+-+..+++.-.
T Consensus 541 ~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 541 QLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999998877654443333333455566787777776665443
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.1e-18 Score=191.12 Aligned_cols=268 Identities=10% Similarity=0.066 Sum_probs=169.0
Q ss_pred HHhcCCCCCeEEEeCcccchH---HHHHHhccCCCeEEEEecCCCCChhhhhcCC--ChHHHHHHhhcCCeEeecCHHHH
Q 003042 184 MEVINPDEDYVWIHDYHLMVL---PSFLRKRFHRVKVGFFLHSPFPSSEIYRTLP--VRDEILKSLLNSDLIGFHTFDYA 258 (854)
Q Consensus 184 ~~~~~~~~D~vwihDyhl~ll---p~~lr~~~~~~~i~~flH~pfP~~e~~~~lp--~r~eil~~ll~~dligf~t~~~~ 258 (854)
++..+| |+|++|+.-.+.. ...+++++ .. +..++|+.|+.+ ++... .....+... ...++
T Consensus 112 l~~~~p--DVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~~Y--~~~~~~g~~~~~l~~~---------~~~~~ 176 (462)
T PLN02846 112 IPDEEA--DIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYLEY--VKREKNGRVKAFLLKY---------INSWV 176 (462)
T ss_pred HHhcCC--CEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChHHH--HHHhccchHHHHHHHH---------HHHHH
Confidence 345677 8999998776666 34555554 44 777999988543 22111 111212111 11223
Q ss_pred HHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc--CC--CEEEEEecC
Q 003042 259 RHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DG--KIVILGVDD 334 (854)
Q Consensus 259 ~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~--~~iil~VdR 334 (854)
+.|. |..++..+....+ +.. .+.+.+.|||++.|..... . .++.+ .+ .+++++|||
T Consensus 177 ~r~~--~d~vi~pS~~~~~------l~~---~~i~~v~GVd~~~f~~~~~-----~----~~~~~~~~~~~~~~~l~vGR 236 (462)
T PLN02846 177 VDIY--CHKVIRLSAATQD------YPR---SIICNVHGVNPKFLEIGKL-----K----LEQQKNGEQAFTKGAYYIGK 236 (462)
T ss_pred HHHh--cCEEEccCHHHHH------Hhh---CEEecCceechhhcCCCcc-----c----HhhhcCCCCCcceEEEEEec
Confidence 2221 4444433321110 001 1222357999988763221 0 11222 12 357999999
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChh
Q 003042 335 MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQ 414 (854)
Q Consensus 335 ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~ 414 (854)
|.+.||+..+|+||.++.+..|+++ |+++| +|++.+++++.+.+ + +.. ++++.|..+.+
T Consensus 237 L~~eK~~~~Li~a~~~l~~~~~~~~----l~ivG-----dGp~~~~L~~~a~~----l-------~l~-~~vf~G~~~~~ 295 (462)
T PLN02846 237 MVWSKGYKELLKLLHKHQKELSGLE----VDLYG-----SGEDSDEVKAAAEK----L-------ELD-VRVYPGRDHAD 295 (462)
T ss_pred CcccCCHHHHHHHHHHHHhhCCCeE----EEEEC-----CCccHHHHHHHHHh----c-------CCc-EEEECCCCCHH
Confidence 9999999999999999988888754 77666 66776666655443 2 222 44466654333
Q ss_pred hHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCC
Q 003042 415 DKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPW 491 (854)
Q Consensus 415 el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~ 491 (854)
++|+.+||||+||.+||||+|.+||||| |.|+|+++..| .+.+. +|+.+ .
T Consensus 296 ---~~~~~~DvFv~pS~~Et~g~v~lEAmA~---------------------G~PVVa~~~~~-~~~v~~~~ng~~~--~ 348 (462)
T PLN02846 296 ---PLFHDYKVFLNPSTTDVVCTTTAEALAM---------------------GKIVVCANHPS-NEFFKQFPNCRTY--D 348 (462)
T ss_pred ---HHHHhCCEEEECCCcccchHHHHHHHHc---------------------CCcEEEecCCC-cceeecCCceEec--C
Confidence 6899999999999999999999999999 45888888776 46562 35555 4
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHH
Q 003042 492 NVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 492 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 540 (854)
|.++++++|.++|+.++.+...+ .+ ..+++..-+++|++.++-
T Consensus 349 ~~~~~a~ai~~~l~~~~~~~~~~---a~---~~~SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 349 DGKGFVRATLKALAEEPAPLTDA---QR---HELSWEAATERFLRVADL 391 (462)
T ss_pred CHHHHHHHHHHHHccCchhHHHH---HH---HhCCHHHHHHHHHHHhcc
Confidence 89999999999998654332211 11 368888888888776653
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.7e-18 Score=195.10 Aligned_cols=266 Identities=9% Similarity=0.050 Sum_probs=166.0
Q ss_pred HhcCCCCCeEEEeCcccchHH---HHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHH
Q 003042 185 EVINPDEDYVWIHDYHLMVLP---SFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHF 261 (854)
Q Consensus 185 ~~~~~~~D~vwihDyhl~llp---~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~F 261 (854)
...+| |+|++|..-.+... ....+++. ++...+||.||.+--+..+..-+.++. .++++|
T Consensus 431 ~~f~P--DVVHLatP~~LGw~~~Glr~ArKl~--PVVasyHTny~eYl~~y~~g~L~~~ll-------------k~l~~~ 493 (794)
T PLN02501 431 PSKDA--DIAILEEPEHLNWYHHGKRWTDKFN--HVVGVVHTNYLEYIKREKNGALQAFFV-------------KHINNW 493 (794)
T ss_pred hccCC--CEEEECCchhhccHHHHHHHHHHcC--CeEEEEeCCcHHHHhHhcchhHHHHHH-------------HHHHHH
Confidence 34566 89999986554444 23334443 699999999995433222222222111 123334
Q ss_pred HHH--HHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCcc
Q 003042 262 LSS--CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMD 336 (854)
Q Consensus 262 l~~--~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld 336 (854)
+.. |.+++.++..... .. +. .|.. ..|||++.|.+... . ... .++ ...+.+++||||.
T Consensus 494 v~r~hcD~VIaPS~atq~------L~-~~-vI~n-VnGVDte~F~P~~r---~----~~~-r~lgi~~~~kgiLfVGRLa 556 (794)
T PLN02501 494 VTRAYCHKVLRLSAATQD------LP-KS-VICN-VHGVNPKFLKIGEK---V----AEE-RELGQQAFSKGAYFLGKMV 556 (794)
T ss_pred HHHhhCCEEEcCCHHHHH------hc-cc-ceee-cccccccccCCcch---h----HHH-HhcCCccccCceEEEEccc
Confidence 333 6666654422111 11 11 1111 15999998864211 1 111 122 1224589999999
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhH
Q 003042 337 LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDK 416 (854)
Q Consensus 337 ~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el 416 (854)
+.||+..+|+|+..+.++.|+++ |+++| +|++.+++++.+. +.+ . .++|+. . .++.
T Consensus 557 ~EKGld~LLeAla~L~~~~pnvr----LvIVG-----DGP~reeLe~la~----eLg-------L-~V~FLG-~--~dd~ 612 (794)
T PLN02501 557 WAKGYRELIDLLAKHKNELDGFN----LDVFG-----NGEDAHEVQRAAK----RLD-------L-NLNFLK-G--RDHA 612 (794)
T ss_pred ccCCHHHHHHHHHHHHhhCCCeE----EEEEc-----CCccHHHHHHHHH----HcC-------C-EEEecC-C--CCCH
Confidence 99999999999999988888654 77776 5565555554443 322 2 254444 3 3445
Q ss_pred HHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-C--CceEeCCCCH
Q 003042 417 VPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S--GAIRVNPWNV 493 (854)
Q Consensus 417 ~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~ai~vnP~d~ 493 (854)
.++|+.+||||+||.+||||+|++||||| |.|+|+++..|.. .+ . ++++ +.|.
T Consensus 613 ~~lyasaDVFVlPS~sEgFGlVlLEAMA~---------------------GlPVVATd~pG~e-~V~~g~nGll--~~D~ 668 (794)
T PLN02501 613 DDSLHGYKVFINPSISDVLCTATAEALAM---------------------GKFVVCADHPSNE-FFRSFPNCLT--YKTS 668 (794)
T ss_pred HHHHHhCCEEEECCCcccchHHHHHHHHc---------------------CCCEEEecCCCCc-eEeecCCeEe--cCCH
Confidence 68999999999999999999999999999 4599999988743 34 2 2333 4789
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHH
Q 003042 494 DAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (854)
Q Consensus 494 ~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 538 (854)
++++++|.++|..++.. ...+. ...+++..-++++++.-
T Consensus 669 EafAeAI~~LLsd~~~r--l~~~a----~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 669 EDFVAKVKEALANEPQP--LTPEQ----RYNLSWEAATQRFMEYS 707 (794)
T ss_pred HHHHHHHHHHHhCchhh--hHHHH----HhhCCHHHHHHHHHHhh
Confidence 99999999999987632 11111 22677777777776543
|
|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.6e-17 Score=180.74 Aligned_cols=262 Identities=15% Similarity=0.155 Sum_probs=178.6
Q ss_pred HHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHH
Q 003042 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHF 261 (854)
Q Consensus 182 ~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~F 261 (854)
++++..+| |+|++|.+..+.++.+...+...+++.+++|-.++... ....+.. ..|.+-..+....+.|
T Consensus 90 ~~~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~------~~~~~~~---~~d~ii~~s~~~~~~~ 158 (359)
T cd03823 90 RLLEDFRP--DVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICP------RQGLFKK---GGDAVIAPSRFLLDRY 158 (359)
T ss_pred HHHHHcCC--CEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecc------hhhhhcc---CCCEEEEeCHHHHHHH
Confidence 44455566 89999988655544443333446899999997654221 1111111 1288777776655555
Q ss_pred HHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCH
Q 003042 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGI 341 (854)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi 341 (854)
... + ....++.++|+|+|...+..... ....++.+++++||+.+.||+
T Consensus 159 ~~~-----~---------------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~ 206 (359)
T cd03823 159 VAN-----G---------------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGV 206 (359)
T ss_pred HHc-----C---------------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCH
Confidence 431 0 11246788999999887642110 112467889999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHH
Q 003042 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (854)
Q Consensus 342 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~ 421 (854)
..+++|+..+.+ ++ +.|+++|... ......... +..+.+.+.+.++.+++..+|+
T Consensus 207 ~~li~~~~~l~~--~~----~~l~i~G~~~-----~~~~~~~~~--------------~~~~~v~~~g~~~~~~~~~~~~ 261 (359)
T cd03823 207 DLLLEAFKRLPR--GD----IELVIVGNGL-----ELEEESYEL--------------EGDPRVEFLGAYPQEEIDDFYA 261 (359)
T ss_pred HHHHHHHHHHHh--cC----cEEEEEcCch-----hhhHHHHhh--------------cCCCeEEEeCCCCHHHHHHHHH
Confidence 999999998866 44 4488777432 111111111 1123566777899999999999
Q ss_pred hCcEEEEccC-ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHH
Q 003042 422 IAECCVVNCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVA 497 (854)
Q Consensus 422 ~ADv~vv~S~-~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A 497 (854)
.||++++||. .||+|++++|||+| |.|+|+|+.+|..+.+. .|+++++.|+++++
T Consensus 262 ~ad~~i~ps~~~e~~~~~~~Ea~a~---------------------G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~ 320 (359)
T cd03823 262 EIDVLVVPSIWPENFPLVIREALAA---------------------GVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLA 320 (359)
T ss_pred hCCEEEEcCcccCCCChHHHHHHHC---------------------CCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHH
Confidence 9999999997 79999999999999 45999999988888773 48999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHH
Q 003042 498 DAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQ 536 (854)
Q Consensus 498 ~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 536 (854)
++|.++++.++ .++...+..++.++. ..+++++++
T Consensus 321 ~~i~~l~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~ 355 (359)
T cd03823 321 AALERLIDDPD-LLERLRAGIEPPRSI---EDQAEEYLK 355 (359)
T ss_pred HHHHHHHhChH-HHHHHHHhHHHhhhH---HHHHHHHHH
Confidence 99999998554 444444444444432 445554443
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.4e-17 Score=180.01 Aligned_cols=278 Identities=18% Similarity=0.134 Sum_probs=189.1
Q ss_pred HHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcC-CChHHHH-HHhhcCCeEeecCHHHHHH
Q 003042 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTL-PVRDEIL-KSLLNSDLIGFHTFDYARH 260 (854)
Q Consensus 183 i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~l-p~r~eil-~~ll~~dligf~t~~~~~~ 260 (854)
+++..+| |+|++|..+..++..++.+.....++.+..|...+........ .....+- ..+-.+|.+.+.+....+.
T Consensus 75 ~~~~~~~--dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 152 (359)
T cd03808 75 LLRKERP--DIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDL 152 (359)
T ss_pred HHHhcCC--CEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHH
Confidence 3345566 8999998887777777766566677888888653321110000 0001111 1233578998888877776
Q ss_pred HHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCC
Q 003042 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKG 340 (854)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KG 340 (854)
+.+. +.. .....+.+.|+|+|...+..... . ...++.+++++||+.+.||
T Consensus 153 ~~~~-----~~~-------------~~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~i~~~G~~~~~k~ 202 (359)
T cd03808 153 ALKL-----GII-------------KKKKTVLIPGSGVDLDRFSPSPE-----P-------IPEDDPVFLFVARLLKDKG 202 (359)
T ss_pred HHHh-----cCC-------------CcCceEEecCCCCChhhcCcccc-----c-------cCCCCcEEEEEeccccccC
Confidence 6541 000 01235667899999887642211 0 1246789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHH
Q 003042 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (854)
Q Consensus 341 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly 420 (854)
+..+++|++.+.+++|+++ |+.+|.... .+ ..... ++.+ .+..+.+.+.+. .+++..+|
T Consensus 203 ~~~li~~~~~l~~~~~~~~----l~i~G~~~~---~~--~~~~~---~~~~-------~~~~~~v~~~g~--~~~~~~~~ 261 (359)
T cd03808 203 IDELLEAARILKAKGPNVR----LLLVGDGDE---EN--PAAIL---EIEK-------LGLEGRVEFLGF--RDDVPELL 261 (359)
T ss_pred HHHHHHHHHHHHhcCCCeE----EEEEcCCCc---ch--hhHHH---HHHh-------cCCcceEEEeec--cccHHHHH
Confidence 9999999999988777654 887775331 11 11111 1111 112234444444 67899999
Q ss_pred HhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHH
Q 003042 421 AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVA 497 (854)
Q Consensus 421 ~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A 497 (854)
+.||++++||..||+|++++|||+| |.|+|+|+.+|..+.+. .|+++++.|+++++
T Consensus 262 ~~adi~i~ps~~e~~~~~~~Ea~~~---------------------G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~ 320 (359)
T cd03808 262 AAADVFVLPSYREGLPRVLLEAMAM---------------------GRPVIATDVPGCREAVIDGVNGFLVPPGDAEALA 320 (359)
T ss_pred HhccEEEecCcccCcchHHHHHHHc---------------------CCCEEEecCCCchhhhhcCcceEEECCCCHHHHH
Confidence 9999999999999999999999999 45999999999988873 38999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhcc-ccccChHHHHHHHH
Q 003042 498 DAMDSALQMENQEKILRHEKHYKY-ISSHDVAYWAKSID 535 (854)
Q Consensus 498 ~ai~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l 535 (854)
++|.+++..++.. ....+..+++ ...++...++++++
T Consensus 321 ~~i~~l~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 321 DAIERLIEDPELR-ARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHhCHHHH-HHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9999988766544 3444445555 67789888888765
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=99.75 E-value=1e-17 Score=175.07 Aligned_cols=191 Identities=17% Similarity=0.198 Sum_probs=115.6
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECCCc---
Q 003042 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKNS--- 662 (854)
Q Consensus 587 lI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~~~--- 662 (854)
+|++|+||||++ .+. ++++++++|+++ ++.|+.++++|||++..+..++..+. ..+++++||+.|..+...
T Consensus 1 li~~DlDGTLl~---~~~-~~~~~~~ai~~l-~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~~ 75 (225)
T TIGR02461 1 VIFTDLDGTLLP---PGY-EPGPAREALEEL-KDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFPF 75 (225)
T ss_pred CEEEeCCCCCcC---CCC-CchHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccccc
Confidence 589999999999 443 556799999999 88999999999999999988886553 336899999999885421
Q ss_pred ------------ceEEccccccchHHHHHHHHHH-----HHhccCCcceEecccceEEEee------ccCCCccchhhHH
Q 003042 663 ------------AWEICSLTRDFDWKEIAEPVMK-----LYTETTDGSFIEDKETAIVWHH------QHADPHFGSCQAK 719 (854)
Q Consensus 663 ------------~~~~~~~~~~~~~~~~v~~~~~-----~y~~~~~g~~ie~k~~~l~~~~------~~~d~~~~~~~~~ 719 (854)
.+...++.. .+.+.++.+.+ .|...+. ... .....+.... +....-+... ..
T Consensus 76 ~~~~~~~~~~~~i~~~~l~~~--~~~~il~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~ki~~~~-~~ 150 (225)
T TIGR02461 76 PVGAGREVGNYEVIELGKPVA--KIRAALKEAENEYGLKYYGNSTA-EEV-EKLTGLPRELAPLAKRREYSETIFLW-SR 150 (225)
T ss_pred cccccccCCCeEEEEcCCCHH--HHHHHHHHHHHhcCccchhcCCH-HHH-HHHHCcCHHHHHHHHhhhcCCcccCC-CH
Confidence 222222211 22222222111 1110000 000 0000000000 0000000000 11
Q ss_pred HHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCC--CCCeEEEEeCCcccHHHHHHhhh
Q 003042 720 ELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGK--SPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 720 el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi--~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+....+.+.+....+.+..+..++++ ++++|||.|++.+++.+ ++ +.+++++|||+.||++||+.+|.
T Consensus 151 e~~~~~~~~~~~~~~~~~~s~~~~~i-~~~~sK~~al~~l~~~~---~~~~~~~~~i~~GD~~nD~~ml~~ag~ 220 (225)
T TIGR02461 151 EGWEAILVTARARGLKYTHGGRFYTV-HGGSDKGKAIKRLLDLY---KLRPGAIESVGLGDSENDFPMFEVVDL 220 (225)
T ss_pred HHHHHHHHHHHHcCCcEEECCEEEEE-CCCCCHHHHHHHHHHHh---ccccCcccEEEEcCCHHHHHHHHhCCC
Confidence 22223333333334455666666776 45999999999999988 65 56689999999999999999996
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.5e-17 Score=184.08 Aligned_cols=276 Identities=12% Similarity=0.049 Sum_probs=172.9
Q ss_pred CeEEEeCcccc--hHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChH---HH---HH-Hh-hcCCeEeecCHHHHHHH
Q 003042 192 DYVWIHDYHLM--VLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRD---EI---LK-SL-LNSDLIGFHTFDYARHF 261 (854)
Q Consensus 192 D~vwihDyhl~--llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~---ei---l~-~l-l~~dligf~t~~~~~~F 261 (854)
|+|.+|..... .+...+..+..+.|+.+.+|.-+++..-.. .+... .+ ++ -+ -.||.|-..+....+.+
T Consensus 97 Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~~-~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~~~l 175 (415)
T cd03816 97 DYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILALK-LGENHPLVRLAKWYEKLFGRLADYNLCVTKAMKEDL 175 (415)
T ss_pred CEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhcc-cCCCCHHHHHHHHHHHHHhhcCCEeeecCHHHHHHH
Confidence 99999974432 333444344457899999996543211010 11000 01 11 11 23676666655433332
Q ss_pred HHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHH---------------H--cC
Q 003042 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKE---------------K--FD 324 (854)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~---------------~--~~ 324 (854)
.+ ++....+|.++|+| +...|.+... .. ....+.+ . -+
T Consensus 176 ~~--------------------~~~~~~ki~vI~Ng-~~~~f~p~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (415)
T cd03816 176 QQ--------------------FNNWKIRATVLYDR-PPEQFRPLPL---EE-KHELFLKLAKTFLTRELRIGAVQLSEE 230 (415)
T ss_pred Hh--------------------hhccCCCeeecCCC-CHHHceeCcH---HH-HHHHHHhccccccccccccccceecCC
Confidence 21 11123467789998 4456643211 11 1111111 0 12
Q ss_pred CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCC--CCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCc
Q 003042 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDL--RGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (854)
Q Consensus 325 ~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~--~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~ 402 (854)
+..+++++||+.+.||+..+++|+..+.+..++. ..++.|+++|. |++.+++++.++ + .+..
T Consensus 231 ~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~-----G~~~~~l~~~~~----~-------~~l~ 294 (415)
T cd03816 231 RPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGK-----GPLKEKYLERIK----E-------LKLK 294 (415)
T ss_pred CceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEec-----CccHHHHHHHHH----H-------cCCC
Confidence 3568889999999999999999999987642111 01355888873 444344444443 3 3455
Q ss_pred cEEEEcCCCChhhHHHHHHhCcEEEEc---cCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcccc
Q 003042 403 PIVIIKEPLSTQDKVPYYAIAECCVVN---CVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS 479 (854)
Q Consensus 403 pv~~~~~~~~~~el~aly~~ADv~vv~---S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 479 (854)
.++++.+.++.+++..+|++||++|++ +..+||+++++||||| |.|+|+|...|..
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~---------------------G~PVI~s~~~~~~ 353 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGC---------------------GLPVCALDFKCID 353 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHc---------------------CCCEEEeCCCCHH
Confidence 688888889999999999999999864 3358899999999999 4599999998888
Q ss_pred ccCC---CceEeCCCCHHHHHHHHHHHhcCC--HHHHHHHHHHHhccccccChHHHHHHHHH
Q 003042 480 PSLS---GAIRVNPWNVDAVADAMDSALQME--NQEKILRHEKHYKYISSHDVAYWAKSIDQ 536 (854)
Q Consensus 480 ~~l~---~ai~vnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 536 (854)
+.+. +|++++ |++++|++|.++++++ +++++.+.+..+++.+ .+|.+.+.+
T Consensus 354 eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~----~~~~~~~~~ 409 (415)
T cd03816 354 ELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE----LRWDENWDR 409 (415)
T ss_pred HHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh----cCHHHHHHH
Confidence 8773 388884 8999999999999982 5566555666555543 445554443
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.8e-17 Score=180.14 Aligned_cols=260 Identities=16% Similarity=0.173 Sum_probs=173.7
Q ss_pred hcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHH-HHhhcCCeEeecCHHHHHHHHHH
Q 003042 186 VINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEIL-KSLLNSDLIGFHTFDYARHFLSS 264 (854)
Q Consensus 186 ~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil-~~ll~~dligf~t~~~~~~Fl~~ 264 (854)
..++ |+|++|+...+.....+... .+.+..+++|........+. .....+. ..+..+|.|-..+..+.+.+..
T Consensus 81 ~~~~--Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~- 154 (357)
T cd03795 81 AKKA--DVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV- 154 (357)
T ss_pred CCCC--CEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH-
Confidence 3455 89999986654333222222 46788889996432221111 1111122 2445688888887766655432
Q ss_pred HHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHH
Q 003042 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLK 344 (854)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~ 344 (854)
. .....++.++|+|+|...+..... .. ........++++|+++||+.+.||+..+
T Consensus 155 ---~----------------~~~~~~~~~i~~gi~~~~~~~~~~-----~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~l 209 (357)
T cd03795 155 ---L----------------RRFRDKVRVIPLGLDPARYPRPDA-----LE-EAIWRRAAGRPFFLFVGRLVYYKGLDVL 209 (357)
T ss_pred ---h----------------cCCccceEEecCCCChhhcCCcch-----hh-hHhhcCCCCCcEEEEecccccccCHHHH
Confidence 0 011135778999999887653211 00 1111112467899999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCc
Q 003042 345 FLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAE 424 (854)
Q Consensus 345 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~AD 424 (854)
++|++++. ++.|+.+|. ++....+++ ++.+ .+..+-+.+.|.++.+++..+|+.||
T Consensus 210 i~a~~~l~--------~~~l~i~G~-----g~~~~~~~~----~~~~-------~~~~~~V~~~g~v~~~~~~~~~~~ad 265 (357)
T cd03795 210 LEAAAALP--------DAPLVIVGE-----GPLEAELEA----LAAA-------LGLLDRVRFLGRLDDEEKAALLAACD 265 (357)
T ss_pred HHHHHhcc--------CcEEEEEeC-----ChhHHHHHH----HHHh-------cCCcceEEEcCCCCHHHHHHHHHhCC
Confidence 99998773 455887773 233333333 3322 23445567788999999999999999
Q ss_pred EEEEccC--ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC----CceEeCCCCHHHHHH
Q 003042 425 CCVVNCV--RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS----GAIRVNPWNVDAVAD 498 (854)
Q Consensus 425 v~vv~S~--~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~----~ai~vnP~d~~~~A~ 498 (854)
++++||. .||+|++++|||+| +.|+|+|+.+|..+.+. .|++++|.|++++++
T Consensus 266 ~~i~ps~~~~e~~g~~~~Ea~~~---------------------g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~ 324 (357)
T cd03795 266 VFVFPSVERSEAFGIVLLEAMAF---------------------GKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAE 324 (357)
T ss_pred EEEeCCcccccccchHHHHHHHc---------------------CCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHH
Confidence 9999996 59999999999999 45999999888877663 378999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHhccc
Q 003042 499 AMDSALQMENQEKILRHEKHYKYI 522 (854)
Q Consensus 499 ai~~aL~m~~~er~~r~~~~~~~v 522 (854)
+|.+++++++. ++...+..++++
T Consensus 325 ~i~~l~~~~~~-~~~~~~~~~~~~ 347 (357)
T cd03795 325 AIRRLLEDPEL-RERLGEAARERA 347 (357)
T ss_pred HHHHHHHCHHH-HHHHHHHHHHHH
Confidence 99999987654 444444555554
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.5e-17 Score=170.55 Aligned_cols=191 Identities=14% Similarity=0.092 Sum_probs=128.0
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECCCcc
Q 003042 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKNSA 663 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~~~~ 663 (854)
+|+||+||||||++ ++..+++.++++|++| ++.|+.|++||||+..++..+...+. ..++|++||+.|..+....
T Consensus 1 ~KLIftDLDGTLLd---~~~~~~~~a~~aL~~L-k~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~~~ 76 (302)
T PRK12702 1 MRLVLSSLDGSLLD---LEFNSYGAARQALAAL-ERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEHYF 76 (302)
T ss_pred CcEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEccccc
Confidence 48999999999999 7777889999999999 89999999999999999999887663 3378999999998774311
Q ss_pred ---------------eEEccccccchHHHHHHHHHHHHhccCCc--------------ceE------ecccceEEEeecc
Q 003042 664 ---------------WEICSLTRDFDWKEIAEPVMKLYTETTDG--------------SFI------EDKETAIVWHHQH 708 (854)
Q Consensus 664 ---------------~~~~~~~~~~~~~~~v~~~~~~y~~~~~g--------------~~i------e~k~~~l~~~~~~ 708 (854)
|.......-..|+..+..+...+.....| .-. ..++++-.+.+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~~w~~ 156 (302)
T PRK12702 77 PAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIFSYSG 156 (302)
T ss_pred cccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcceEecC
Confidence 00000111113444444443332211111 000 0112222222221
Q ss_pred CCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEee------------------C---CcchHHHHHHHHHHHhhCC
Q 003042 709 ADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKP------------------Q---GVSKGIVVKNLISTMRSRG 767 (854)
Q Consensus 709 ~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p------------------~---gvsKg~al~~ll~~l~~~g 767 (854)
. ...+ .+.+....+.+..|..++.++. . +++||.|++.|.+.+....
T Consensus 157 ~--------~~~~----~~~~~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~ 224 (302)
T PRK12702 157 D--------PARL----REAFAQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHL 224 (302)
T ss_pred C--------HHHH----HHHHHHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhcc
Confidence 1 1111 4445556677778887877776 5 8999999999999984332
Q ss_pred CCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 768 KSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 768 i~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
..-.++++|||.||++|++++.+.
T Consensus 225 -~~~~tiaLGDspND~~mLe~~D~~ 248 (302)
T PRK12702 225 -GPIKALGIGCSPPDLAFLRWSEQK 248 (302)
T ss_pred -CCceEEEecCChhhHHHHHhCCee
Confidence 334899999999999999999863
|
|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.9e-17 Score=179.66 Aligned_cols=186 Identities=15% Similarity=0.091 Sum_probs=137.4
Q ss_pred EEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 003042 290 SIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITN 369 (854)
Q Consensus 290 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~ 369 (854)
++.++|+|||++.|.+... ...++.++++++|+.+.||+..+|+|++++.+++|+++ |+.+|.
T Consensus 119 ~i~vIpNGVd~~~f~~~~~-------------~~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~----llivG~ 181 (331)
T PHA01630 119 PIYVIPHNLNPRMFEYKPK-------------EKPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFY----FLIKSS 181 (331)
T ss_pred CEEEECCCCCHHHcCCCcc-------------ccCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEE----EEEEeC
Confidence 5778999999887742210 01245567778899999999999999999988877654 777772
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCC
Q 003042 370 PARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGS 449 (854)
Q Consensus 370 p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~ 449 (854)
. .. +. ++. + + .+ +.+.++.+++..+|+.||+||+||..||||++++|||||
T Consensus 182 ~-----~~--~~--~l~------~--~--~~------~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~---- 232 (331)
T PHA01630 182 N-----ML--DP--RLF------G--L--NG------VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALAL---- 232 (331)
T ss_pred c-----cc--ch--hhc------c--c--cc------eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHc----
Confidence 1 11 11 110 0 0 11 234588999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCCCCceEEEecCccccccCCC-----------------------ceEeCCCCHHHHHHHHHHHhcC
Q 003042 450 PVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSG-----------------------AIRVNPWNVDAVADAMDSALQM 506 (854)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~-----------------------ai~vnP~d~~~~A~ai~~aL~m 506 (854)
|.|+|+|..+|..+.+.+ |++++| |.+++++++.++|..
T Consensus 233 -----------------G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~ 294 (331)
T PHA01630 233 -----------------GLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALAN 294 (331)
T ss_pred -----------------CCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhC
Confidence 459999998887877632 444455 788899999999987
Q ss_pred C--HHHHHHHHHHHhccccccChHHHHHHHHHHHH
Q 003042 507 E--NQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (854)
Q Consensus 507 ~--~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 539 (854)
+ ++.++...+....+.+++++...++++++-++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 295 WTPEKKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 4 44444444455556788999999999988765
|
|
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-16 Score=174.70 Aligned_cols=247 Identities=21% Similarity=0.174 Sum_probs=166.7
Q ss_pred HhcCCCCCeEEEeCc-ccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHH
Q 003042 185 EVINPDEDYVWIHDY-HLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLS 263 (854)
Q Consensus 185 ~~~~~~~D~vwihDy-hl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~ 263 (854)
...++ |+|++|++ ...++.. +..+. +.++.+.+|..++...... .+........+..+|.+-+.+....+.+.+
T Consensus 78 ~~~~~--dii~~~~~~~~~~~~~-~~~~~-~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 152 (353)
T cd03811 78 RKEKP--DVVISHLTTTPNVLAL-LAARL-GTKLIVWEHNSLSLELKRK-LRLLLLIRKLYRRADKIVAVSEGVKEDLLK 152 (353)
T ss_pred HhcCC--CEEEEcCccchhHHHH-HHhhc-CCceEEEEcCcchhhhccc-hhHHHHHHhhccccceEEEeccchhhhHHH
Confidence 33466 89999988 4444444 44444 7899999998876432211 111112334456788888877766655543
Q ss_pred HHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHH
Q 003042 264 SCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISL 343 (854)
Q Consensus 264 ~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~ 343 (854)
.. + ....++.++|+|+|...+...... .. ......++.+++++||+++.||+..
T Consensus 153 ~~----~---------------~~~~~~~vi~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~i~~~g~~~~~k~~~~ 206 (353)
T cd03811 153 LL----G---------------IPPDKIEVIYNPIDIEEIRALAEE-----PL--ELGIPPDGPVILAVGRLSPQKGFDT 206 (353)
T ss_pred hh----c---------------CCccccEEecCCcChhhcCcccch-----hh--hcCCCCCceEEEEEecchhhcChHH
Confidence 21 0 013467889999998876532110 00 0011256789999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhC
Q 003042 344 KFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIA 423 (854)
Q Consensus 344 ~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~A 423 (854)
+++|+..+.+++++++ |+.+|. ++...+++ +++.+. +..+.+.+.+. .+++..+|+.|
T Consensus 207 ~i~~~~~l~~~~~~~~----l~i~G~-----~~~~~~~~----~~~~~~-------~~~~~v~~~g~--~~~~~~~~~~~ 264 (353)
T cd03811 207 LIRAFALLRKEGPDAR----LVILGD-----GPLREELE----ALAKEL-------GLADRVHFLGF--QSNPYPYLKAA 264 (353)
T ss_pred HHHHHHHhhhcCCCce----EEEEcC-----CccHHHHH----HHHHhc-------CCCccEEEecc--cCCHHHHHHhC
Confidence 9999999988776654 777774 22323333 333332 23344455555 35788999999
Q ss_pred cEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHHHHH
Q 003042 424 ECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAM 500 (854)
Q Consensus 424 Dv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai 500 (854)
|+++.||..||+|++++|||+| |.|+|+|+.+|..+.+. .|+++++.|.+++++++
T Consensus 265 d~~i~ps~~e~~~~~~~Ea~~~---------------------G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~ 323 (353)
T cd03811 265 DLFVLSSRYEGFPNVLLEAMAL---------------------GTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAA 323 (353)
T ss_pred CEEEeCcccCCCCcHHHHHHHh---------------------CCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHH
Confidence 9999999999999999999999 45999999998888773 48999999999995444
Q ss_pred HHHhc
Q 003042 501 DSALQ 505 (854)
Q Consensus 501 ~~aL~ 505 (854)
..+..
T Consensus 324 ~~i~~ 328 (353)
T cd03811 324 LALLD 328 (353)
T ss_pred HHHHh
Confidence 44433
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.7e-16 Score=176.99 Aligned_cols=190 Identities=16% Similarity=0.158 Sum_probs=135.4
Q ss_pred EEEEeccccCchHHHhhhCCchHHHHHHHHHHHc-CCCEEEEEecCccccCCHHHHH----HHHHHHHHhCCCCCCcEEE
Q 003042 290 SIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMDLFKGISLKF----LAMGQLLEQHPDLRGKVVL 364 (854)
Q Consensus 290 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iil~VdRld~~KGi~~~l----~A~~~ll~~~p~~~~~vvL 364 (854)
++.++|+|||.+.|.+....+ ..+ .++++|+++||+++.||+..++ .++..+.+++|+++ |
T Consensus 197 ~v~vipngvd~~~f~~~~~~~----------~~~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l 262 (397)
T TIGR03087 197 RITAFPNGVDADFFSPDRDYP----------NPYPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----F 262 (397)
T ss_pred CeEEeecccchhhcCCCcccc----------CCCCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----E
Confidence 577889999998885321100 111 3567899999999999999887 56667777888766 8
Q ss_pred EEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccC-ccCCCCcceeee
Q 003042 365 VQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCV-RDGMNLVPYKYT 443 (854)
Q Consensus 365 vqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~-~EG~~Lv~~Ea~ 443 (854)
+++|.. +. . +++++. . .+-+.+.|.++ ++..+|+.||++|+||. .||++++++|||
T Consensus 263 ~ivG~g-----~~-~----~~~~l~----~-------~~~V~~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAm 319 (397)
T TIGR03087 263 YIVGAK-----PS-P----AVRALA----A-------LPGVTVTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAM 319 (397)
T ss_pred EEECCC-----Ch-H----HHHHhc----c-------CCCeEEeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHH
Confidence 877742 22 1 222221 1 12234566665 78999999999999996 599999999999
Q ss_pred eeecCCCccccccCCCCCCCCCCCceEEEecCcccccc-C-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhcc
Q 003042 444 VSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS-L-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKY 521 (854)
Q Consensus 444 a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~-l-~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 521 (854)
+| |.|+|+|..++.... . ..++++. .|++++|++|.+++++++ .++...++.+++
T Consensus 320 a~---------------------G~PVV~t~~~~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~~~-~~~~~~~~ar~~ 376 (397)
T TIGR03087 320 AM---------------------AKPVVASPEAAEGIDALPGAELLVA-ADPADFAAAILALLANPA-EREELGQAARRR 376 (397)
T ss_pred Hc---------------------CCCEEecCcccccccccCCcceEeC-CCHHHHHHHHHHHHcCHH-HHHHHHHHHHHH
Confidence 99 458888876432111 1 2478885 899999999999998654 455566666777
Q ss_pred c-cccChHHHHHHHHHHHH
Q 003042 522 I-SSHDVAYWAKSIDQDLE 539 (854)
Q Consensus 522 v-~~~~~~~W~~~~l~~l~ 539 (854)
+ .++++...++++.+-+.
T Consensus 377 v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 377 VLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHhCCHHHHHHHHHHHhc
Confidence 6 56899999988876553
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.1e-16 Score=173.85 Aligned_cols=267 Identities=14% Similarity=0.049 Sum_probs=172.3
Q ss_pred CeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHH-----HhhcCCeEeecCHHHHHHHHHHHH
Q 003042 192 DYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILK-----SLLNSDLIGFHTFDYARHFLSSCS 266 (854)
Q Consensus 192 D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~-----~ll~~dligf~t~~~~~~Fl~~~~ 266 (854)
|+++||.......+.....+..+.++.+.+|..-.....+.. ....+++ .+..+|.|-..+....+.+..
T Consensus 86 ~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~--- 160 (363)
T cd04955 86 DIDHVHALGPAIAPFLPLLRLKGKKVVVNMDGLEWKRAKWGR--PAKRYLKFGEKLAVKFADRLIADSPGIKEYLKE--- 160 (363)
T ss_pred CeEEEEecCccHHHHHHHHHhcCCCEEEEccCcceeeccccc--chhHHHHHHHHHHHhhccEEEeCCHHHHHHHHH---
Confidence 566666555443332222222367899988852111111110 1111221 344678888877654444322
Q ss_pred hhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc--CCCEEEEEecCccccCCHHHH
Q 003042 267 RMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVDDMDLFKGISLK 344 (854)
Q Consensus 267 r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~iil~VdRld~~KGi~~~ 344 (854)
. + +... .++|+|+|...+.. ....++.+ .+++.++++||+.+.||+..+
T Consensus 161 -~---------------~-~~~~--~~i~ngv~~~~~~~----------~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~l 211 (363)
T cd04955 161 -K---------------Y-GRDS--TYIPYGADHVVSSE----------EDEILKKYGLEPGRYYLLVGRIVPENNIDDL 211 (363)
T ss_pred -h---------------c-CCCC--eeeCCCcChhhcch----------hhhhHHhcCCCCCcEEEEEecccccCCHHHH
Confidence 1 1 1111 67899999876532 01112222 345678899999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCc
Q 003042 345 FLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAE 424 (854)
Q Consensus 345 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~AD 424 (854)
++|+.++.. ++.|+++|... ...++.+.+.+ + . +..+.+.+.|.++.+++..+|+.||
T Consensus 212 i~a~~~l~~-------~~~l~ivG~~~-----~~~~~~~~~~~---~----~---~~~~~V~~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 212 IEAFSKSNS-------GKKLVIVGNAD-----HNTPYGKLLKE---K----A---AADPRIIFVGPIYDQELLELLRYAA 269 (363)
T ss_pred HHHHHhhcc-------CceEEEEcCCC-----CcchHHHHHHH---H----h---CCCCcEEEccccChHHHHHHHHhCC
Confidence 999987632 35588888532 11233333332 1 1 1224556778899999999999999
Q ss_pred EEEEccCc-cCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-CCceEeCCCCHHHHHHHHHH
Q 003042 425 CCVVNCVR-DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDS 502 (854)
Q Consensus 425 v~vv~S~~-EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ai~~ 502 (854)
++++||.. ||||++++|||+| |.|+|+|..+|..+.+ .++..++|.|. +|++|.+
T Consensus 270 ~~v~ps~~~e~~~~~~~EAma~---------------------G~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~ 326 (363)
T cd04955 270 LFYLHGHSVGGTNPSLLEAMAY---------------------GCPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEE 326 (363)
T ss_pred EEEeCCccCCCCChHHHHHHHc---------------------CCCEEEecCCccceeecCCeeEecCchH--HHHHHHH
Confidence 99999999 9999999999999 4599999998887777 45888888776 9999999
Q ss_pred HhcCCHHHHHHHHHHHhccc-cccChHHHHHHHHHHH
Q 003042 503 ALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDL 538 (854)
Q Consensus 503 aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l 538 (854)
++..++..++ ..+..++.+ ..+++..-++++++.+
T Consensus 327 l~~~~~~~~~-~~~~~~~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 327 LEADPEEVSA-MAKAARERIREKYTWEKIADQYEELY 362 (363)
T ss_pred HHhCHHHHHH-HHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9998754443 344445555 4589888888887654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.8e-16 Score=170.83 Aligned_cols=248 Identities=14% Similarity=0.056 Sum_probs=166.0
Q ss_pred HHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHH
Q 003042 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFL 262 (854)
Q Consensus 183 i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl 262 (854)
+++..++ |+|++|+....++ + .+..+.++.+.+|..++.... .....+...+.+-+-+....+.+.
T Consensus 82 ~~~~~~~--Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~ 147 (335)
T cd03802 82 ALAAGDF--DIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPWP 147 (335)
T ss_pred HHhcCCC--CEEEecCcccchh---h-hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhcc
Confidence 3444556 8999999887776 2 334578899999987653211 123333344444333332222111
Q ss_pred HHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHH
Q 003042 263 SSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGIS 342 (854)
Q Consensus 263 ~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~ 342 (854)
.. .++.++|+|||++.|... ..++.+++++||+.+.||+.
T Consensus 148 -----------------------~~-~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~ 187 (335)
T cd03802 148 -----------------------PL-PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPH 187 (335)
T ss_pred -----------------------cc-cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHH
Confidence 00 357789999999887520 13466899999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHh
Q 003042 343 LKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAI 422 (854)
Q Consensus 343 ~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ 422 (854)
.+++|+.+ +++ .|+++|... ....+...+.+.. . ..+.+.+.|.++.+++..+|+.
T Consensus 188 ~li~~~~~-----~~~----~l~i~G~~~-----~~~~~~~~~~~~~----~------~~~~v~~~G~~~~~~~~~~~~~ 243 (335)
T cd03802 188 LAIRAARR-----AGI----PLKLAGPVS-----DPDYFYREIAPEL----L------DGPDIEYLGEVGGAEKAELLGN 243 (335)
T ss_pred HHHHHHHh-----cCC----eEEEEeCCC-----CHHHHHHHHHHhc----c------cCCcEEEeCCCCHHHHHHHHHh
Confidence 99998754 343 477777432 1122222222210 0 1134556778999999999999
Q ss_pred CcEEEEccC-ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHHH
Q 003042 423 AECCVVNCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVAD 498 (854)
Q Consensus 423 ADv~vv~S~-~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ 498 (854)
||++|+||. .||||++++|||+| |.|+|+|+.+|..+.+. .|+++++ ++++++
T Consensus 244 ~d~~v~ps~~~E~~~~~~lEAma~---------------------G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~ 300 (335)
T cd03802 244 ARALLFPILWEEPFGLVMIEAMAC---------------------GTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAA 300 (335)
T ss_pred CcEEEeCCcccCCcchHHHHHHhc---------------------CCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHH
Confidence 999999997 59999999999999 45999999999888883 3788887 999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHH
Q 003042 499 AMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQD 537 (854)
Q Consensus 499 ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 537 (854)
+|.+++.++.... + .....++++..-++++++-
T Consensus 301 ~l~~l~~~~~~~~--~----~~~~~~~s~~~~~~~~~~~ 333 (335)
T cd03802 301 AVARADRLDRAAC--R----RRAERRFSAARMVDDYLAL 333 (335)
T ss_pred HHHHHhccHHHHH--H----HHHHHhCCHHHHHHHHHHH
Confidence 9999876543211 1 1122557877777776653
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.6e-16 Score=174.61 Aligned_cols=245 Identities=18% Similarity=0.167 Sum_probs=162.1
Q ss_pred CCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCC----Chhhh-hcCCC-------------hHHHHHHhhcCCeEee
Q 003042 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFP----SSEIY-RTLPV-------------RDEILKSLLNSDLIGF 252 (854)
Q Consensus 191 ~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP----~~e~~-~~lp~-------------r~eil~~ll~~dligf 252 (854)
-|+|+++.. .+....+ +.++.+..+++|.|.+ ..+.+ ...+. +.-..+.+..+|.|..
T Consensus 84 ~D~v~~~~~--~~~~~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~ 159 (351)
T cd03804 84 YDLVISSSH--AVAKGVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYFIA 159 (351)
T ss_pred CCEEEEcCc--HHhcccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 388877643 2222222 4557888889998632 11111 11110 0111223456788877
Q ss_pred cCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEe
Q 003042 253 HTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGV 332 (854)
Q Consensus 253 ~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~V 332 (854)
.+....+.+.+. . +. ...++|+|+|.+.|.... ..+++++++
T Consensus 160 ~S~~~~~~~~~~----~----------------~~--~~~vi~~~~d~~~~~~~~----------------~~~~~il~~ 201 (351)
T cd03804 160 NSRFVARRIKKY----Y----------------GR--DATVIYPPVDTDRFTPAE----------------EKEDYYLSV 201 (351)
T ss_pred CCHHHHHHHHHH----h----------------CC--CcEEECCCCCHhhcCcCC----------------CCCCEEEEE
Confidence 777666555331 1 11 234678999987764210 234579999
Q ss_pred cCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCC
Q 003042 333 DDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLS 412 (854)
Q Consensus 333 dRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~ 412 (854)
||+.+.||+..+++|++++ | ++ |+++|. +++.+++++ . ..+.+.+.|.++
T Consensus 202 G~~~~~K~~~~li~a~~~~----~-~~----l~ivG~-----g~~~~~l~~-------~---------~~~~V~~~g~~~ 251 (351)
T cd03804 202 GRLVPYKRIDLAIEAFNKL----G-KR----LVVIGD-----GPELDRLRA-------K---------AGPNVTFLGRVS 251 (351)
T ss_pred EcCccccChHHHHHHHHHC----C-Cc----EEEEEC-----ChhHHHHHh-------h---------cCCCEEEecCCC
Confidence 9999999999999999765 3 33 777773 333333332 0 012345667899
Q ss_pred hhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-C--CceEeC
Q 003042 413 TQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S--GAIRVN 489 (854)
Q Consensus 413 ~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~ai~vn 489 (854)
.+++.++|+.||++++||. ||||++++|||+| |.|+|+|..+|..+.+ + .|++++
T Consensus 252 ~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~---------------------G~Pvi~~~~~~~~e~i~~~~~G~~~~ 309 (351)
T cd03804 252 DEELRDLYARARAFLFPAE-EDFGIVPVEAMAS---------------------GTPVIAYGKGGALETVIDGVTGILFE 309 (351)
T ss_pred HHHHHHHHHhCCEEEECCc-CCCCchHHHHHHc---------------------CCCEEEeCCCCCcceeeCCCCEEEeC
Confidence 9999999999999999999 9999999999999 4599999998888777 2 489999
Q ss_pred CCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHH
Q 003042 490 PWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKS 533 (854)
Q Consensus 490 P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~ 533 (854)
|.|++++|++|.+++++++..+ +.+.+...++++.+..++
T Consensus 310 ~~~~~~la~~i~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~ 349 (351)
T cd03804 310 EQTVESLAAAVERFEKNEDFDP----QAIRAHAERFSESRFREK 349 (351)
T ss_pred CCCHHHHHHHHHHHHhCcccCH----HHHHHHHHhcCHHHHHHH
Confidence 9999999999999998874222 222333344555555543
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.5e-16 Score=173.53 Aligned_cols=195 Identities=16% Similarity=0.158 Sum_probs=141.6
Q ss_pred EEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccc--cCCHHHHHHHHHHHHHh-CCCCCCcE
Q 003042 289 VSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDL--FKGISLKFLAMGQLLEQ-HPDLRGKV 362 (854)
Q Consensus 289 ~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~--~KGi~~~l~A~~~ll~~-~p~~~~~v 362 (854)
.++.++|+|||...+... .. ...++.+ .++.+++.+++... .||+..+++|++.+.++ .| ++
T Consensus 159 ~~~~vi~ngi~~~~~~~~-----~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~----~~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPR-----DK---REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKD----DI 226 (365)
T ss_pred CceEEeCCCCcccccCCC-----cH---HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCC----Ce
Confidence 367889999998877421 11 1223333 35566666666654 89999999999988665 34 45
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCC-hhhHHHHHHhCcEEEEccCccCCCCccee
Q 003042 363 VLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLS-TQDKVPYYAIAECCVVNCVRDGMNLVPYK 441 (854)
Q Consensus 363 vLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~-~~el~aly~~ADv~vv~S~~EG~~Lv~~E 441 (854)
.++.+|... .... . +....+.+.+.++ .+++..+|+.||++++||..||||++++|
T Consensus 227 ~~~i~G~~~-----~~~~--~----------------~~~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGASD-----PEIP--P----------------DLPFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCCc-----hhhh--c----------------cCCCceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 577777432 1000 0 0112345566777 78999999999999999999999999999
Q ss_pred eeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 003042 442 YTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKH 518 (854)
Q Consensus 442 a~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 518 (854)
||+| +.|+|+|..+|..+.+. .|+++++.|++++|++|.+++..++ ++....++.
T Consensus 284 am~~---------------------g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~~-~~~~~~~~~ 341 (365)
T cd03825 284 ALAC---------------------GTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADPD-EREELGEAA 341 (365)
T ss_pred HHhc---------------------CCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHH
Confidence 9999 45999999988888773 4899999999999999999997664 444445555
Q ss_pred hccc-cccChHHHHHHHHHHHHH
Q 003042 519 YKYI-SSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 519 ~~~v-~~~~~~~W~~~~l~~l~~ 540 (854)
++++ ..+++..+++++++-+++
T Consensus 342 ~~~~~~~~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 342 RELAENEFDSRVQAKRYLSLYEE 364 (365)
T ss_pred HHHHHHhcCHHHHHHHHHHHHhh
Confidence 5655 458999999888876543
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=99.69 E-value=4e-17 Score=172.89 Aligned_cols=193 Identities=21% Similarity=0.354 Sum_probs=119.8
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCC--c-ccceeecCcEEEEECCC
Q 003042 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV--E-KLGLSAEHGYFTRWSKN 661 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~--~-~l~liaenG~~I~~~~~ 661 (854)
.++|++|+||||++ .+..-..+..+.++.. ..+++.++++|||+...+.+.+... + .-.+++.+|..|+...
T Consensus 2 ~~ll~sDlD~Tl~~---~~~~~~~~l~~~l~~~-~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~- 76 (247)
T PF05116_consen 2 PRLLASDLDGTLID---GDDEALARLEELLEQQ-ARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGE- 76 (247)
T ss_dssp SEEEEEETBTTTBH---CHHHHHHHHHHHHHHH-HCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESS-
T ss_pred CEEEEEECCCCCcC---CCHHHHHHHHHHHHHh-hCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcC-
Confidence 58999999999993 2222334555555523 5899999999999999999887643 1 2357899999988832
Q ss_pred cceEEccccccchHHHH---------HHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCC
Q 003042 662 SAWEICSLTRDFDWKEI---------AEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANE 732 (854)
Q Consensus 662 ~~~~~~~~~~~~~~~~~---------v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~ 732 (854)
.|.. +..|.+. +.+++..+..-.+....+...+.+.+.+...+. ...++.|+..+...
T Consensus 77 -~~~~-----d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~~-------~~~~~~i~~~l~~~ 143 (247)
T PF05116_consen 77 -NWQP-----DEEWQAHIDERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDDS-------ADILEEIRARLRQR 143 (247)
T ss_dssp -TTEE------HHHHHHHHTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTSH-------CHHHHHHHHHHHCC
T ss_pred -CCcC-----hHHHHHHHHhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEecccc-------hhHHHHHHHHHHHc
Confidence 2221 1123322 223333332211111112223344444433211 12345555555444
Q ss_pred C---EEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEe
Q 003042 733 P---VVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTV 809 (854)
Q Consensus 733 ~---~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~v 809 (854)
. ..+.++...++|.|++++||.|+++|++++ ++++++++++|||.||++||.... .+|.|
T Consensus 144 ~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~---~~~~~~vl~aGDSgND~~mL~~~~--------------~~vvV 206 (247)
T PF05116_consen 144 GLRVNVIYSNGRDLDILPKGASKGAALRYLMERW---GIPPEQVLVAGDSGNDLEMLEGGD--------------HGVVV 206 (247)
T ss_dssp TCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHH---T--GGGEEEEESSGGGHHHHCCSS--------------EEEE-
T ss_pred CCCeeEEEccceeEEEccCCCCHHHHHHHHHHHh---CCCHHHEEEEeCCCCcHHHHcCcC--------------CEEEE
Confidence 3 234567889999999999999999999999 999999999999999999995443 47888
Q ss_pred cCC
Q 003042 810 GQK 812 (854)
Q Consensus 810 G~~ 812 (854)
|+.
T Consensus 207 ~Na 209 (247)
T PF05116_consen 207 GNA 209 (247)
T ss_dssp TTS
T ss_pred cCC
Confidence 875
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.1e-15 Score=170.09 Aligned_cols=275 Identities=15% Similarity=0.174 Sum_probs=171.3
Q ss_pred HHHHHHHhcCCCCCeEEEeCcccchHHHHHHh-ccCCCeEEEEecCCCC-ChhhhhcCCChHHHHHHhh-cCCeEeecCH
Q 003042 179 FADKVMEVINPDEDYVWIHDYHLMVLPSFLRK-RFHRVKVGFFLHSPFP-SSEIYRTLPVRDEILKSLL-NSDLIGFHTF 255 (854)
Q Consensus 179 fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~-~~~~~~i~~flH~pfP-~~e~~~~lp~r~eil~~ll-~~dligf~t~ 255 (854)
...++++..+| |+|++|.+.++ |.++.. +..++++.+..|.-.+ +...|+.+ ..+.+.++ .+|.|..++.
T Consensus 115 ~~~~~l~~~~P--d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~ 187 (425)
T PRK05749 115 AVRRFLRFWRP--KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSE 187 (425)
T ss_pred HHHHHHHhhCC--CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCH
Confidence 34445677788 89999988765 555533 3346777776664333 22333322 23333333 4799999998
Q ss_pred HHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc-CCCEEEEEecC
Q 003042 256 DYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDD 334 (854)
Q Consensus 256 ~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iil~VdR 334 (854)
...+.|.+ +|+. .. +.++|++ +.+.+. .+........+++.+ +++++++++++
T Consensus 188 ~~~~~l~~-----~g~~---------------~~-i~vi~n~-~~d~~~----~~~~~~~~~~~r~~~~~~~~vil~~~~ 241 (425)
T PRK05749 188 EDAERFLA-----LGAK---------------NE-VTVTGNL-KFDIEV----PPELAARAATLRRQLAPNRPVWIAAST 241 (425)
T ss_pred HHHHHHHH-----cCCC---------------CC-cEecccc-cccCCC----ChhhHHHHHHHHHHhcCCCcEEEEeCC
Confidence 88877754 2321 11 3344542 222111 011112234566666 67888999987
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHH-HHHHHHHHHHHHHHhhccC-CCC-C----ccEEEE
Q 003042 335 MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDV-QDLLSDTNRIAEEINLNFG-KPG-Y----EPIVII 407 (854)
Q Consensus 335 ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~-~~l~~~v~~~v~~In~~~~-~~~-~----~pv~~~ 407 (854)
. .|+...+++||.++++++|+++ |+++| ++++. ++++ +++.+.+-.+. ..+ . ...+++
T Consensus 242 ~--~~~~~~ll~A~~~l~~~~~~~~----liivG-----~g~~r~~~l~----~~~~~~gl~~~~~~~~~~~~~~~~v~l 306 (425)
T PRK05749 242 H--EGEEELVLDAHRALLKQFPNLL----LILVP-----RHPERFKEVE----ELLKKAGLSYVRRSQGEPPSADTDVLL 306 (425)
T ss_pred C--chHHHHHHHHHHHHHHhCCCcE----EEEcC-----CChhhHHHHH----HHHHhCCCcEEEccCCCCCCCCCcEEE
Confidence 5 5889999999999998899765 77665 34442 3344 33333221110 000 0 012333
Q ss_pred cCCCChhhHHHHHHhCcEEEE-ccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcccc----ccC
Q 003042 408 KEPLSTQDKVPYYAIAECCVV-NCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS----PSL 482 (854)
Q Consensus 408 ~~~~~~~el~aly~~ADv~vv-~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l 482 (854)
.+ +..|+..+|+.||++++ +|+.||+|++++|||+| |.|+|++...|.. +.+
T Consensus 307 ~~--~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~---------------------G~PVI~g~~~~~~~e~~~~~ 363 (425)
T PRK05749 307 GD--TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAF---------------------GVPVISGPHTFNFKEIFERL 363 (425)
T ss_pred Ee--cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHh---------------------CCCEEECCCccCHHHHHHHH
Confidence 33 25799999999999666 68889999999999999 4588887654433 222
Q ss_pred -CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhcccccc
Q 003042 483 -SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSH 525 (854)
Q Consensus 483 -~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 525 (854)
.+|.++.|.|++++|++|.++++.+ +.+....++.++++.++
T Consensus 364 ~~~g~~~~~~d~~~La~~l~~ll~~~-~~~~~m~~~a~~~~~~~ 406 (425)
T PRK05749 364 LQAGAAIQVEDAEDLAKAVTYLLTDP-DARQAYGEAGVAFLKQN 406 (425)
T ss_pred HHCCCeEEECCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHhC
Confidence 4578888999999999999999755 45555666667777655
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.8e-15 Score=170.63 Aligned_cols=239 Identities=10% Similarity=-0.009 Sum_probs=157.1
Q ss_pred cCCCCCeEEEeCcccch--HHHHHHhccCCCeEEEEecCCCCChhhhhc-C---C----ChHHHHHHh-hcCCeEeecCH
Q 003042 187 INPDEDYVWIHDYHLMV--LPSFLRKRFHRVKVGFFLHSPFPSSEIYRT-L---P----VRDEILKSL-LNSDLIGFHTF 255 (854)
Q Consensus 187 ~~~~~D~vwihDyhl~l--lp~~lr~~~~~~~i~~flH~pfP~~e~~~~-l---p----~r~eil~~l-l~~dligf~t~ 255 (854)
.+| |+|++|..+.+. +++.+-.+..++|+.+.+|..+.+ .+.. . + ....+-+.+ -.+|.|-..+.
T Consensus 99 ~~~--DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~ 174 (371)
T PLN02275 99 PRP--DVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTK 174 (371)
T ss_pred CCC--CEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCH
Confidence 456 899999877532 344444444568899999975421 1110 0 0 011111222 23677777776
Q ss_pred HHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCc
Q 003042 256 DYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDM 335 (854)
Q Consensus 256 ~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRl 335 (854)
...+...+. .|.. +.++|+|+ .+.|.+... . ..++ ...+.+++++||+
T Consensus 175 ~~~~~l~~~--------------------~g~~--i~vi~n~~-~~~f~~~~~-----~--~~~~--~~~~~~i~~~grl 222 (371)
T PLN02275 175 AMQHELDQN--------------------WGIR--ATVLYDQP-PEFFRPASL-----E--IRLR--PNRPALVVSSTSW 222 (371)
T ss_pred HHHHHHHHh--------------------cCCC--eEEECCCC-HHHcCcCCc-----h--hccc--CCCcEEEEEeCce
Confidence 555543320 0111 56788884 455542211 0 0111 1245678899999
Q ss_pred cccCCHHHHHHHHHHHHH-----------------hCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCC
Q 003042 336 DLFKGISLKFLAMGQLLE-----------------QHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGK 398 (854)
Q Consensus 336 d~~KGi~~~l~A~~~ll~-----------------~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~ 398 (854)
.+.||+..+++|+..+.. ++|+ +.|+++| +|++.+++++.+++
T Consensus 223 ~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG-----~G~~~~~l~~~~~~----------- 282 (371)
T PLN02275 223 TPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITG-----KGPQKAMYEEKISR----------- 282 (371)
T ss_pred eccCCHHHHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEe-----CCCCHHHHHHHHHH-----------
Confidence 999999999999988753 2454 5588887 44554555554443
Q ss_pred CCCccEEEEcCCCChhhHHHHHHhCcEEEEcc---CccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecC
Q 003042 399 PGYEPIVIIKEPLSTQDKVPYYAIAECCVVNC---VRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF 475 (854)
Q Consensus 399 ~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S---~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~ 475 (854)
.+...++++.+.++.+++..+|+.||+||+|+ ..|||+++.+||||| |.|+|+|..
T Consensus 283 ~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~---------------------G~PVVa~~~ 341 (371)
T PLN02275 283 LNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGC---------------------GLPVCAVSY 341 (371)
T ss_pred cCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHC---------------------CCCEEEecC
Confidence 34455777887889999999999999999853 248999999999999 459999998
Q ss_pred ccccccCC---CceEeCCCCHHHHHHHHHHHh
Q 003042 476 IGCSPSLS---GAIRVNPWNVDAVADAMDSAL 504 (854)
Q Consensus 476 ~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL 504 (854)
+|..+.+. .|++++ |++++|++|.++|
T Consensus 342 gg~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 342 SCIGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred CChHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 88888773 388886 6999999998865
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.65 E-value=9.1e-15 Score=166.42 Aligned_cols=294 Identities=20% Similarity=0.194 Sum_probs=199.9
Q ss_pred CeEEEeCcccchHHHHHHhc---cCCCeEEEEecCC-----CCChhhh--hcCCC------------hHHHHH-HhhcCC
Q 003042 192 DYVWIHDYHLMVLPSFLRKR---FHRVKVGFFLHSP-----FPSSEIY--RTLPV------------RDEILK-SLLNSD 248 (854)
Q Consensus 192 D~vwihDyhl~llp~~lr~~---~~~~~i~~flH~p-----fP~~e~~--~~lp~------------r~eil~-~ll~~d 248 (854)
|||++||+|.-|+|.++++. ...++..|+.|-= |+ ...+ -.||. .-..++ |+..+|
T Consensus 132 DIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~-~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad 210 (487)
T COG0297 132 DIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFR-LQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYAD 210 (487)
T ss_pred CEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccc-hhhHHHhcCCHHHhhhceeeecCcchhhhhhheecc
Confidence 99999999999999999997 7789999999932 23 2222 23441 112333 577788
Q ss_pred eEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCC-----------chHHHHHH
Q 003042 249 LIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSL-----------DVTGQKVK 317 (854)
Q Consensus 249 ligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~-----------~~~~~~~~ 317 (854)
.|.--++.|++.-...--.. |+. | .+.+ +.-++.-+-+|||.....+.... +...+...
T Consensus 211 ~vttVSptYa~Ei~t~~~g~-gl~-----g--~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~ 280 (487)
T COG0297 211 AVTTVSPTYAGEIYTPEYGE-GLE-----G--LLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKV 280 (487)
T ss_pred EEEEECHHHHHhhccccccc-cch-----h--hhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHH
Confidence 88888888877654100000 000 0 0111 11344555667776654322110 01122234
Q ss_pred HHHHHc--C---CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHH
Q 003042 318 ELKEKF--D---GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEI 392 (854)
Q Consensus 318 ~l~~~~--~---~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~I 392 (854)
.+++.+ . +.+++..|+|++..||++.+++|+..++++. ++ ||.+|.+ -..++..+..++.++
T Consensus 281 ~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~----~vilG~g-------d~~le~~~~~la~~~ 347 (487)
T COG0297 281 ALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ----LVLLGTG-------DPELEEALRALASRH 347 (487)
T ss_pred HHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce----EEEEecC-------cHHHHHHHHHHHHhc
Confidence 455555 2 4689999999999999999999999999987 44 7777743 135677777787776
Q ss_pred hhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEE
Q 003042 393 NLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIV 472 (854)
Q Consensus 393 n~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~ 472 (854)
..++ .+.-..+..--..+|+.||++++||..|++||+-+++|.- |+++|+
T Consensus 348 ~~~~---------~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amry---------------------GtvpIv 397 (487)
T COG0297 348 PGRV---------LVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRY---------------------GTLPIV 397 (487)
T ss_pred CceE---------EEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHc---------------------CCcceE
Confidence 5433 2333345556668999999999999999999999999997 569999
Q ss_pred ecCccccccCC----------C-ceEeCCCCHHHHHHHHHHHhcC---CHH-HHHHHHHHHhccccccChHHHHHHHHHH
Q 003042 473 SEFIGCSPSLS----------G-AIRVNPWNVDAVADAMDSALQM---ENQ-EKILRHEKHYKYISSHDVAYWAKSIDQD 537 (854)
Q Consensus 473 Se~~G~~~~l~----------~-ai~vnP~d~~~~A~ai~~aL~m---~~~-er~~r~~~~~~~v~~~~~~~W~~~~l~~ 537 (854)
.+.+|.++.+. + |+++.|.+.++++.||.+|+.. ++. -+..+..+|. ..+++..-+++++.-
T Consensus 398 ~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~l 474 (487)
T COG0297 398 RETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVEL 474 (487)
T ss_pred cccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHH
Confidence 99999998883 2 7889888999999999999875 333 3333333333 467777777777766
Q ss_pred HHHHH
Q 003042 538 LERAC 542 (854)
Q Consensus 538 l~~~~ 542 (854)
.+.+.
T Consensus 475 Y~~~~ 479 (487)
T COG0297 475 YKPLL 479 (487)
T ss_pred HHHHh
Confidence 55543
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.5e-15 Score=149.96 Aligned_cols=144 Identities=22% Similarity=0.316 Sum_probs=111.5
Q ss_pred CCCEEEEEecCccccCCHHHHHHHHHHHHHh-CCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCc
Q 003042 324 DGKIVILGVDDMDLFKGISLKFLAMGQLLEQ-HPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (854)
Q Consensus 324 ~~~~iil~VdRld~~KGi~~~l~A~~~ll~~-~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~ 402 (854)
.++++|+++||+++.||+..+++|++.+.++ .+++ .|+.+|. ++....++.. +... +..
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~----~l~i~G~-----~~~~~~~~~~----~~~~-------~~~ 72 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNY----KLVIVGD-----GEYKKELKNL----IEKL-------NLK 72 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTE----EEEEESH-----CCHHHHHHHH----HHHT-------TCG
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCe----EEEEEcc-----cccccccccc----cccc-------ccc
Confidence 5789999999999999999999999999875 6654 4777772 2222333333 3332 222
Q ss_pred cEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC
Q 003042 403 PIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (854)
Q Consensus 403 pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (854)
..+.+.+.++.+++.++|+.||++|.||..||+|++++|||+| +.|+|+|..+|..+.+
T Consensus 73 ~~i~~~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~---------------------g~pvI~~~~~~~~e~~ 131 (172)
T PF00534_consen 73 ENIIFLGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMAC---------------------GCPVIASDIGGNNEII 131 (172)
T ss_dssp TTEEEEESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHT---------------------T-EEEEESSTHHHHHS
T ss_pred ccccccccccccccccccccceecccccccccccccccccccc---------------------ccceeeccccCCceee
Confidence 2233445677899999999999999999999999999999999 5699999988887777
Q ss_pred C---CceEeCCCCHHHHHHHHHHHhcCCH
Q 003042 483 S---GAIRVNPWNVDAVADAMDSALQMEN 508 (854)
Q Consensus 483 ~---~ai~vnP~d~~~~A~ai~~aL~m~~ 508 (854)
. .|+++++.|+++++++|.+++.+++
T Consensus 132 ~~~~~g~~~~~~~~~~l~~~i~~~l~~~~ 160 (172)
T PF00534_consen 132 NDGVNGFLFDPNDIEELADAIEKLLNDPE 160 (172)
T ss_dssp GTTTSEEEESTTSHHHHHHHHHHHHHHHH
T ss_pred ccccceEEeCCCCHHHHHHHHHHHHCCHH
Confidence 3 2699999999999999999999873
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.8e-13 Score=151.90 Aligned_cols=267 Identities=12% Similarity=0.099 Sum_probs=168.4
Q ss_pred cCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCCh-HHHHHHhhcCCeEeecCHHHHHHHHHHH
Q 003042 187 INPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR-DEILKSLLNSDLIGFHTFDYARHFLSSC 265 (854)
Q Consensus 187 ~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r-~eil~~ll~~dligf~t~~~~~~Fl~~~ 265 (854)
++.++.++|.+..-...+... .+..++.+-+|..|+...... +.. ...-+.+-.||+|-..+....+.+..
T Consensus 99 ~~~~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~~--~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~-- 170 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGGP--PELLEAERRLLKRADLVFTTSPSLYEAKRR-- 170 (373)
T ss_pred cCCCCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCCC--HHHHHHHHHHHHhCCEEEECCHHHHHHHhh--
Confidence 344457899875555444444 456788888887665432110 111 11222345689988777765543321
Q ss_pred HhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHH
Q 003042 266 SRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKF 345 (854)
Q Consensus 266 ~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l 345 (854)
+ + .++.++|+|+|.+.|......+.. .+.+ ...++++|+++|++++.+++. +|
T Consensus 171 ------------------~-~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~--~~~~~~~i~y~G~l~~~~d~~-ll 223 (373)
T cd04950 171 ------------------L-N--PNVVLVPNGVDYEHFAAARDPPPP---PADL--AALPRPVIGYYGAIAEWLDLE-LL 223 (373)
T ss_pred ------------------C-C--CCEEEcccccCHHHhhcccccCCC---hhHH--hcCCCCEEEEEeccccccCHH-HH
Confidence 1 1 356789999999999643221110 0111 114678999999999977664 33
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcE
Q 003042 346 LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAEC 425 (854)
Q Consensus 346 ~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv 425 (854)
. .+.+.+|+++ |++||... .. .+. .++ ... +-+.+.|.++.+++.++|+.||+
T Consensus 224 ~---~la~~~p~~~----~vliG~~~---~~--~~~-~~~-------------~~~-~nV~~~G~~~~~~l~~~l~~~Dv 276 (373)
T cd04950 224 E---ALAKARPDWS----FVLIGPVD---VS--IDP-SAL-------------LRL-PNVHYLGPKPYKELPAYLAGFDV 276 (373)
T ss_pred H---HHHHHCCCCE----EEEECCCc---Cc--cCh-hHh-------------ccC-CCEEEeCCCCHHHHHHHHHhCCE
Confidence 3 3445678875 88777431 00 011 000 011 23455678999999999999999
Q ss_pred EEEccC-----ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCCCceEeCCCCHHHHHHHH
Q 003042 426 CVVNCV-----RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAM 500 (854)
Q Consensus 426 ~vv~S~-----~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai 500 (854)
+++|+. ++++++..+||||| |.|+|+|...++.+. .++..+.+.|.++++++|
T Consensus 277 ~l~P~~~~~~~~~~~P~Kl~EylA~---------------------G~PVVat~~~~~~~~-~~~~~~~~~d~~~~~~ai 334 (373)
T cd04950 277 AILPFRLNELTRATSPLKLFEYLAA---------------------GKPVVATPLPEVRRY-EDEVVLIADDPEEFVAAI 334 (373)
T ss_pred EecCCccchhhhcCCcchHHHHhcc---------------------CCCEEecCcHHHHhh-cCcEEEeCCCHHHHHHHH
Confidence 999986 35789999999999 348888876554433 334455567999999999
Q ss_pred HHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHH
Q 003042 501 DSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 501 ~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 540 (854)
.++|..+..++..+.. +.+.+||+..-+++++..|..
T Consensus 335 ~~~l~~~~~~~~~~~~---~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 335 EKALLEDGPARERRRL---RLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHhcCCchHHHHHH---HHHHHCCHHHHHHHHHHHHHh
Confidence 9988655433332221 267889999999888866653
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.3e-13 Score=145.38 Aligned_cols=188 Identities=15% Similarity=0.190 Sum_probs=142.3
Q ss_pred HHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc-CCCEEEEEecCccccCCHHH
Q 003042 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMDLFKGISL 343 (854)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iil~VdRld~~KGi~~ 343 (854)
..|...+++.++.+.+ +.-.-..-++.++|+-++...|.+.... +. .+...|+.++||-+.||+++
T Consensus 146 id~~IcVshtskentv-lr~~L~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDl 212 (426)
T KOG1111|consen 146 IDRIICVSHTSKENTV-LRGALAPAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDL 212 (426)
T ss_pred CCcEEEEeecCCCceE-EEeccCHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHH
Confidence 3455566777666543 3333344588999999999999753221 22 34588999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhC
Q 003042 344 KFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIA 423 (854)
Q Consensus 344 ~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~A 423 (854)
++..+.++-++||+.+ ++++| +||....+++.+++. ..+..+-+.|.++++++...|...
T Consensus 213 l~~iIp~vc~~~p~vr----fii~G-----DGPk~i~lee~lEk~-----------~l~~rV~~lG~v~h~~Vr~vl~~G 272 (426)
T KOG1111|consen 213 LLEIIPSVCDKHPEVR----FIIIG-----DGPKRIDLEEMLEKL-----------FLQDRVVMLGTVPHDRVRDVLVRG 272 (426)
T ss_pred HHHHHHHHHhcCCCee----EEEec-----CCcccchHHHHHHHh-----------hccCceEEecccchHHHHHHHhcC
Confidence 9999999999999987 77666 666555555555442 122344466689999999999999
Q ss_pred cEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCCCc-eEeCCCCHHHHHHHHHH
Q 003042 424 ECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGA-IRVNPWNVDAVADAMDS 502 (854)
Q Consensus 424 Dv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~a-i~vnP~d~~~~A~ai~~ 502 (854)
|+|+.||+.|.|+++..||+.| |-++|.+..+|..+.|... +..-+-.++++++++.+
T Consensus 273 ~IFlntSlTEafc~~ivEAaSc---------------------GL~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ 331 (426)
T KOG1111|consen 273 DIFLNTSLTEAFCMVIVEAASC---------------------GLPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEK 331 (426)
T ss_pred cEEeccHHHHHHHHHHHHHHhC---------------------CCEEEEeecCCccccCCccceeccCCChHHHHHHHHH
Confidence 9999999999999999999999 3477777788878888544 44556678999999888
Q ss_pred HhcC
Q 003042 503 ALQM 506 (854)
Q Consensus 503 aL~m 506 (854)
+++.
T Consensus 332 ai~~ 335 (426)
T KOG1111|consen 332 AITK 335 (426)
T ss_pred HHHH
Confidence 8763
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.7e-13 Score=132.71 Aligned_cols=200 Identities=21% Similarity=0.284 Sum_probs=121.9
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCC--cccceeecCcEEEEECC
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV--EKLGLSAEHGYFTRWSK 660 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~--~~l~liaenG~~I~~~~ 660 (854)
.++++||+|+||||++++ .+..+ ....+.+| .+.|..|++||..+..++..+-..+ +.+++++|||+.|+-+.
T Consensus 5 ~~~~lIFtDlD~TLl~~~-ye~~p---A~pv~~el-~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~ 79 (274)
T COG3769 5 QMPLLIFTDLDGTLLPHS-YEWQP---AAPVLLEL-KDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPK 79 (274)
T ss_pred ccceEEEEcccCcccCCC-CCCCc---cchHHHHH-HHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEecc
Confidence 467999999999999922 23333 34556666 6779999999999999988876654 56899999999998764
Q ss_pred CcceEEcc--c-----cccc-------hHHHHHHHHHHHHhccC-----CcceEe-----cccceEEEeeccCCCccchh
Q 003042 661 NSAWEICS--L-----TRDF-------DWKEIAEPVMKLYTETT-----DGSFIE-----DKETAIVWHHQHADPHFGSC 716 (854)
Q Consensus 661 ~~~~~~~~--~-----~~~~-------~~~~~v~~~~~~y~~~~-----~g~~ie-----~k~~~l~~~~~~~d~~~~~~ 716 (854)
+ |...- . .... .+.+....+-+.|--.+ .....+ .....++. -++.......+
T Consensus 80 ~--~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~-~rEyseti~~r 156 (274)
T COG3769 80 G--WFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAM-LREYSETIIWR 156 (274)
T ss_pred c--ccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHH-HHHhhhheeec
Confidence 3 22110 0 0000 11122212212221100 000000 00000000 00000000011
Q ss_pred hHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 717 QAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 717 ~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
..++...++...+...++.++.|..+..+......||.|++.+++.+...+.. .-++.+||+.||.+||+....
T Consensus 157 s~d~~~~~~~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~~-r~t~~~GDg~nD~Pl~ev~d~ 230 (274)
T COG3769 157 SSDERMAQFTARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRRLGGA-RTTLGLGDGPNDAPLLEVMDY 230 (274)
T ss_pred ccchHHHHHHHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHhcCce-eEEEecCCCCCcccHHHhhhh
Confidence 12344556666777778889999999999998999999999999987443322 259999999999999999875
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.5e-11 Score=137.52 Aligned_cols=191 Identities=14% Similarity=0.138 Sum_probs=123.8
Q ss_pred EEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccccCCHHHHHHHHHHHHHh----CCCCCCcE
Q 003042 290 SIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGISLKFLAMGQLLEQ----HPDLRGKV 362 (854)
Q Consensus 290 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~~KGi~~~l~A~~~ll~~----~p~~~~~v 362 (854)
+|.+++++|+...+... + ....+++++ +++++|+.+||....||+...++++..++.. .|+.
T Consensus 174 ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~---- 242 (382)
T PLN02605 174 QIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIG---- 242 (382)
T ss_pred HEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCc----
Confidence 45667888886433211 1 123456666 4688999999999999999999999876522 2332
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceee
Q 003042 363 VLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKY 442 (854)
Q Consensus 363 vLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea 442 (854)
.++.+++ +++ ++++++++... + ..+. +.|.+ +++..+|++||++|.+| .++++.||
T Consensus 243 ~~~vi~G----~~~---~~~~~L~~~~~------~----~~v~-~~G~~--~~~~~l~~aaDv~V~~~----g~~ti~EA 298 (382)
T PLN02605 243 QVVVICG----RNK---KLQSKLESRDW------K----IPVK-VRGFV--TNMEEWMGACDCIITKA----GPGTIAEA 298 (382)
T ss_pred eEEEEEC----CCH---HHHHHHHhhcc------c----CCeE-EEecc--ccHHHHHHhCCEEEECC----CcchHHHH
Confidence 2333442 222 23333332200 0 1233 55555 47999999999999866 37899999
Q ss_pred eeeecCCCccccccCCCCCCCCCCCceEEEecCc-----cccccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 003042 443 TVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI-----GCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHE 516 (854)
Q Consensus 443 ~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-----G~~~~l-~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~ 516 (854)
|+| +.|+|++... |-.+.+ +++.-+.+.|+++++++|.++|.++++.++.+.+
T Consensus 299 ma~---------------------g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~ 357 (382)
T PLN02605 299 LIR---------------------GLPIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSE 357 (382)
T ss_pred HHc---------------------CCCEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 999 4589998853 323333 3433444689999999999999874556666667
Q ss_pred HHhccccccChHHHHHHHHH
Q 003042 517 KHYKYISSHDVAYWAKSIDQ 536 (854)
Q Consensus 517 ~~~~~v~~~~~~~W~~~~l~ 536 (854)
..+++...+....-++.+++
T Consensus 358 ~~~~~~~~~a~~~i~~~l~~ 377 (382)
T PLN02605 358 NALKLARPEAVFDIVHDLHE 377 (382)
T ss_pred HHHHhcCCchHHHHHHHHHH
Confidence 77777777776666655443
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.35 E-value=2e-11 Score=137.19 Aligned_cols=185 Identities=12% Similarity=0.097 Sum_probs=141.3
Q ss_pred CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCC-cEEEEEEecC-CCCChhHHHHHHHHHHHHHHHHhhccCCCCCcc
Q 003042 326 KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRG-KVVLVQITNP-ARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (854)
Q Consensus 326 ~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~-~vvLvqi~~p-~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~p 403 (854)
..++..+.|+.|-||+...|.||..+...-|+..- ...++..+++ +.+...+..++..++.+++++-+ .+ ..
T Consensus 273 d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~-l~-----g~ 346 (495)
T KOG0853|consen 273 DRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYD-LL-----GQ 346 (495)
T ss_pred ceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhC-cc-----Cc
Confidence 67899999999999999999999999888765221 2444545533 33444555566777777777732 12 23
Q ss_pred EEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-
Q 003042 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL- 482 (854)
Q Consensus 404 v~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l- 482 (854)
.++|....++.+.+.+++.+.+..+++..|.||+|++|||+| +-|+|++..+|..|.+
T Consensus 347 ~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~---------------------glPvvAt~~GGP~EiV~ 405 (495)
T KOG0853|consen 347 FVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMAC---------------------GLPVVATNNGGPAEIVV 405 (495)
T ss_pred eEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhc---------------------CCCEEEecCCCceEEEE
Confidence 667766788888888888888899999999999999999999 4599999999999998
Q ss_pred --CCceEeCCCCHH---HHHHHHHHHhcCCHHHHHHHHHHHhccccc-cChHHHHHHHHHHHH
Q 003042 483 --SGAIRVNPWNVD---AVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSIDQDLE 539 (854)
Q Consensus 483 --~~ai~vnP~d~~---~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l~ 539 (854)
..|++++| +.+ .+|++|.++.+.|+. +....+..++.|.+ ++++...+++..-+.
T Consensus 406 ~~~tG~l~dp-~~e~~~~~a~~~~kl~~~p~l-~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~ 466 (495)
T KOG0853|consen 406 HGVTGLLIDP-GQEAVAELADALLKLRRDPEL-WARMGKNGLKRVKEMFSWQHYSERIASVLG 466 (495)
T ss_pred cCCcceeeCC-chHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHHHHhHHHHHHHHHHHhH
Confidence 34999999 666 599999999988876 66666777777776 787555555555444
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.25 E-value=7.5e-10 Score=120.10 Aligned_cols=198 Identities=22% Similarity=0.288 Sum_probs=141.6
Q ss_pred EEEEeccccCchHHHhhhCCchHHHHHHHHHHH-cCC--CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 003042 290 SIKILPVGIHMGQFESIMSLDVTGQKVKELKEK-FDG--KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (854)
Q Consensus 290 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~-~~~--~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 366 (854)
.+.+.|.|+++..+... +.. ..+ +.+++++||+.+.||+...++|+..+.+..++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPA-------------RIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCcc-------------ccCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 56778999999877532 000 112 36899999999999999999999999877765 44666
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeee
Q 003042 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (854)
Q Consensus 367 i~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~ 446 (854)
+|..... ...+.. ++.+.+. .+.+.+.+.++.+++..+|+.||+++.||..||+|++.+|||+|
T Consensus 236 ~g~~~~~----~~~~~~----~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~- 299 (381)
T COG0438 236 VGDGPER----REELEK----LAKKLGL-------EDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAA- 299 (381)
T ss_pred EcCCCcc----HHHHHH----HHHHhCC-------CCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhc-
Confidence 6643211 122222 3333221 23444577788889999999999999999999999999999998
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEecCccccccCCC---ceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHH-HHhccc
Q 003042 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSG---AIRVNPWNVDAVADAMDSALQMENQEKILRHE-KHYKYI 522 (854)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~---ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~-~~~~~v 522 (854)
+.|+|+|...|..+.+.. |+++++.|.+++++++..++++++ .++...+ ......
T Consensus 300 --------------------g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~ 358 (381)
T COG0438 300 --------------------GTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDPE-LREELGEAARERVE 358 (381)
T ss_pred --------------------CCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHH
Confidence 358899999988888843 778888889999999999998883 3333332 233333
Q ss_pred cccChHHHHHHHHHHHHHH
Q 003042 523 SSHDVAYWAKSIDQDLERA 541 (854)
Q Consensus 523 ~~~~~~~W~~~~l~~l~~~ 541 (854)
..+++..-++.+.+-+...
T Consensus 359 ~~~~~~~~~~~~~~~~~~~ 377 (381)
T COG0438 359 EEFSWERIAEQLLELYEEL 377 (381)
T ss_pred HhcCHHHHHHHHHHHHHHH
Confidence 5678777776666655544
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.1e-10 Score=118.20 Aligned_cols=111 Identities=20% Similarity=0.204 Sum_probs=80.7
Q ss_pred EecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCC
Q 003042 331 GVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP 410 (854)
Q Consensus 331 ~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~ 410 (854)
++||+.+.||+...++|+..+.+++|+++ ++.+|... . .+ ..+..+.. .+ ....+.++. .
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~----~~i~G~~~--~-~~--~~~~~~~~--------~~--~~~~v~~~~-~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLK----LVIAGDGP--E-RE--YLEELLAA--------LL--LLDRVIFLG-G 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeE----EEEEeCCC--C-hH--HHHHHHHh--------cC--CcccEEEeC-C
Confidence 99999999999999999999988887654 88887532 1 11 11111111 11 112344444 4
Q ss_pred C-ChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC
Q 003042 411 L-STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (854)
Q Consensus 411 ~-~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (854)
+ +.+++..+++.||+++.||..||++.+++|||+| +.|+|+|+..|..+.+
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~---------------------g~pvi~s~~~~~~e~i 220 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMAC---------------------GLPVIATDVGGPPEIV 220 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhC---------------------CCCEEEcCCCCcceEE
Confidence 4 5566667777799999999999999999999999 4599999998877755
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=4.1e-09 Score=119.30 Aligned_cols=274 Identities=11% Similarity=0.098 Sum_probs=160.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEe
Q 003042 172 YLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIG 251 (854)
Q Consensus 172 Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dlig 251 (854)
+...+..-..++++..+| |+|.+| +....++.+.++...++++....+...+.. ..+.+ .+|.+-
T Consensus 88 ~~~~~~~~l~~~l~~~~p--D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~td~~~~~---------~~~~~---~ad~i~ 152 (380)
T PRK13609 88 YANFGRKRLKLLLQAEKP--DIVINT-FPIIAVPELKKQTGISIPTYNVLTDFCLHK---------IWVHR---EVDRYF 152 (380)
T ss_pred HHHHHHHHHHHHHHHhCc--CEEEEc-ChHHHHHHHHHhcCCCCCeEEEeCCCCCCc---------ccccC---CCCEEE
Confidence 333444445667777788 898885 666677877766666677653332111110 01111 588887
Q ss_pred ecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCch-HHHhhhCCchHHHHHHHHHHHc---CCCE
Q 003042 252 FHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMG-QFESIMSLDVTGQKVKELKEKF---DGKI 327 (854)
Q Consensus 252 f~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~-~~~~~~~~~~~~~~~~~l~~~~---~~~~ 327 (854)
..+....+.+.+ .|+. ..++.++ |++.. .|... .+ ...+++++ ++++
T Consensus 153 ~~s~~~~~~l~~-----~gi~---------------~~ki~v~--G~p~~~~f~~~---~~----~~~~~~~~~l~~~~~ 203 (380)
T PRK13609 153 VATDHVKKVLVD-----IGVP---------------PEQVVET--GIPIRSSFELK---IN----PDIIYNKYQLCPNKK 203 (380)
T ss_pred ECCHHHHHHHHH-----cCCC---------------hhHEEEE--CcccChHHcCc---CC----HHHHHHHcCCCCCCc
Confidence 777654444332 1221 1123333 33332 23211 11 12245555 2444
Q ss_pred -EEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEE
Q 003042 328 -VILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVI 406 (854)
Q Consensus 328 -iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~ 406 (854)
+++..|++...||+...++++. +.|++ .++.+++. +++ +++++++++.+. + ..|++
T Consensus 204 ~il~~~G~~~~~k~~~~li~~l~----~~~~~----~~viv~G~---~~~----~~~~l~~~~~~~----~----~~v~~ 260 (380)
T PRK13609 204 ILLIMAGAHGVLGNVKELCQSLM----SVPDL----QVVVVCGK---NEA----LKQSLEDLQETN----P----DALKV 260 (380)
T ss_pred EEEEEcCCCCCCcCHHHHHHHHh----hCCCc----EEEEEeCC---CHH----HHHHHHHHHhcC----C----CcEEE
Confidence 5666799999999998888864 23544 36666532 122 333444443321 1 23555
Q ss_pred EcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecC-cccc----cc
Q 003042 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF-IGCS----PS 481 (854)
Q Consensus 407 ~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~----~~ 481 (854)
+ +.+ +++..+|+.||++|. ++.|+++.|||+| +.|+|++.. .|.. ..
T Consensus 261 ~-g~~--~~~~~l~~~aD~~v~----~~gg~t~~EA~a~---------------------g~PvI~~~~~~g~~~~n~~~ 312 (380)
T PRK13609 261 F-GYV--ENIDELFRVTSCMIT----KPGGITLSEAAAL---------------------GVPVILYKPVPGQEKENAMY 312 (380)
T ss_pred E-ech--hhHHHHHHhccEEEe----CCCchHHHHHHHh---------------------CCCEEECCCCCCcchHHHHH
Confidence 4 554 468899999999874 4458999999999 347888763 3321 11
Q ss_pred C-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHHH
Q 003042 482 L-SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541 (854)
Q Consensus 482 l-~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 541 (854)
+ ..|..+.+.|.++++++|.++++.++ .+..+.+..+++...++....++.+++.+...
T Consensus 313 ~~~~G~~~~~~~~~~l~~~i~~ll~~~~-~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 313 FERKGAAVVIRDDEEVFAKTEALLQDDM-KLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred HHhCCcEEEECCHHHHHHHHHHHHCCHH-HHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 2 23445556899999999999998654 44445556666777788888888887766544
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.16 E-value=2e-09 Score=120.03 Aligned_cols=249 Identities=14% Similarity=0.128 Sum_probs=148.9
Q ss_pred HHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHH
Q 003042 180 ADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYAR 259 (854)
Q Consensus 180 a~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~ 259 (854)
+.++++..+| |+|+.|.... .++..+..+..++|+.++-|..||.. . +.++. ..+|.|...+....+
T Consensus 81 ~~~~i~~~~p--DvI~~~~~~~-~~~~~~~a~~~~~p~v~~~~~~~~~~--~------~~~~~--~~~~~vi~~s~~~~~ 147 (350)
T cd03785 81 ARKILKKFKP--DVVVGFGGYV-SGPVGLAAKLLGIPLVIHEQNAVPGL--A------NRLLA--RFADRVALSFPETAK 147 (350)
T ss_pred HHHHHHhcCC--CEEEECCCCc-chHHHHHHHHhCCCEEEEcCCCCccH--H------HHHHH--HhhCEEEEcchhhhh
Confidence 3345566677 8999986544 34445555555777877666555421 0 11111 125666665543222
Q ss_pred HHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCcc
Q 003042 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMD 336 (854)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld 336 (854)
. + ...++.++|+|+|.+.+... + . ++++ .++++|+.+++..
T Consensus 148 ~-----------------------~--~~~~~~~i~n~v~~~~~~~~---~----~----~~~~~~~~~~~~i~~~~g~~ 191 (350)
T cd03785 148 Y-----------------------F--PKDKAVVTGNPVREEILALD---R----E----RARLGLRPGKPTLLVFGGSQ 191 (350)
T ss_pred c-----------------------C--CCCcEEEECCCCchHHhhhh---h----h----HHhcCCCCCCeEEEEECCcH
Confidence 1 0 11356778999998766421 1 0 2333 4677888888888
Q ss_pred ccCCHHHHH-HHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhh
Q 003042 337 LFKGISLKF-LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQD 415 (854)
Q Consensus 337 ~~KGi~~~l-~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~e 415 (854)
..|+...++ .|++.+. + ++ +.++.+++ ++ +.+++++.++++ + ..++ +.+.+ ++
T Consensus 192 ~~~~~~~~l~~a~~~l~-~-~~----~~~~~i~G----~g-~~~~l~~~~~~~--------~----~~v~-~~g~~--~~ 245 (350)
T cd03785 192 GARAINEAVPEALAELL-R-KR----LQVIHQTG----KG-DLEEVKKAYEEL--------G----VNYE-VFPFI--DD 245 (350)
T ss_pred hHHHHHHHHHHHHHHhh-c-cC----eEEEEEcC----Cc-cHHHHHHHHhcc--------C----CCeE-Eeehh--hh
Confidence 888877654 7776663 2 22 33333332 22 234444433221 1 1144 44443 79
Q ss_pred HHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcc----c----cccC---CC
Q 003042 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG----C----SPSL---SG 484 (854)
Q Consensus 416 l~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~----~~~l---~~ 484 (854)
+..+|+.||++|.+| | +.+++|||+|+ -|+|++...| + ++.+ ..
T Consensus 246 ~~~~l~~ad~~v~~s---g-~~t~~Eam~~G---------------------~Pvv~~~~~~~~~~~~~~~~~~l~~~g~ 300 (350)
T cd03785 246 MAAAYAAADLVISRA---G-ASTVAELAALG---------------------LPAILIPLPYAADDHQTANARALVKAGA 300 (350)
T ss_pred HHHHHHhcCEEEECC---C-HhHHHHHHHhC---------------------CCEEEeecCCCCCCcHHHhHHHHHhCCC
Confidence 999999999999876 3 57899999993 4777765443 1 2333 23
Q ss_pred ceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHH
Q 003042 485 AIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAY 529 (854)
Q Consensus 485 ai~vnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 529 (854)
|+++++. |.++++++|.+++.. ++.++...++.++++..+...+
T Consensus 301 g~~v~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~ 346 (350)
T cd03785 301 AVLIPQEELTPERLAAALLELLSD-PERLKAMAEAARSLARPDAAER 346 (350)
T ss_pred EEEEecCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHhcCCCCHHHH
Confidence 7899887 899999999999965 4455555556666666555444
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.9e-09 Score=118.81 Aligned_cols=253 Identities=15% Similarity=0.147 Sum_probs=146.5
Q ss_pred HHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhh--cCCeEeecC
Q 003042 177 KVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLL--NSDLIGFHT 254 (854)
Q Consensus 177 ~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll--~~dligf~t 254 (854)
..|++. ++..+| |+|.+|......+.+.+-.+..++|+...-+-- -+...+. |+.+++.+-+. -+|++--.+
T Consensus 76 ~~l~~~-l~~~~p--Div~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s 149 (365)
T TIGR00236 76 EGLEEL-LLEEKP--DIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAPT 149 (365)
T ss_pred HHHHHH-HHHcCC--CEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCCC
Confidence 455554 455677 999999655555555554444567876432211 0111111 22233323222 267766677
Q ss_pred HHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcC-CCEEE-EEe
Q 003042 255 FDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFD-GKIVI-LGV 332 (854)
Q Consensus 255 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~-~~~ii-l~V 332 (854)
....+++++ +|++ ..+|.++++|+....+..... + ....+++++. ++.++ +..
T Consensus 150 ~~~~~~l~~-----~G~~---------------~~~I~vign~~~d~~~~~~~~-~----~~~~~~~~~~~~~~~vl~~~ 204 (365)
T TIGR00236 150 EQAKDNLLR-----ENVK---------------ADSIFVTGNTVIDALLTNVEI-A----YSSPVLSEFGEDKRYILLTL 204 (365)
T ss_pred HHHHHHHHH-----cCCC---------------cccEEEeCChHHHHHHHHHhh-c----cchhHHHhcCCCCCEEEEec
Confidence 776666653 1322 236778888863222221111 0 1123444553 23444 444
Q ss_pred cCcc-ccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCC
Q 003042 333 DDMD-LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL 411 (854)
Q Consensus 333 dRld-~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~ 411 (854)
.|.. ..||+..+++|+.++.+++|+++ ++.++.|. ++ .+.++ ...++ . ...+ .+.+.+
T Consensus 205 hr~~~~~k~~~~ll~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~~---~~~~~----~--~~~v-~~~~~~ 263 (365)
T TIGR00236 205 HRRENVGEPLENIFKAIREIVEEFEDVQ----IVYPVHLN----PV---VREPL---HKHLG----D--SKRV-HLIEPL 263 (365)
T ss_pred CchhhhhhHHHHHHHHHHHHHHHCCCCE----EEEECCCC----hH---HHHHH---HHHhC----C--CCCE-EEECCC
Confidence 4653 45999999999999998888764 55554332 11 11111 12211 1 1234 455678
Q ss_pred ChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEe-cCccccccC-CC-ceEe
Q 003042 412 STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS-EFIGCSPSL-SG-AIRV 488 (854)
Q Consensus 412 ~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l-~~-ai~v 488 (854)
+..++..+|+.||+++.+| |.+..|||+|+ .|+|++ ..+|..+.+ .+ ++++
T Consensus 264 ~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g---------------------~PvI~~~~~~~~~e~~~~g~~~lv 317 (365)
T TIGR00236 264 EYLDFLNLAANSHLILTDS-----GGVQEEAPSLG---------------------KPVLVLRDTTERPETVEAGTNKLV 317 (365)
T ss_pred ChHHHHHHHHhCCEEEECC-----hhHHHHHHHcC---------------------CCEEECCCCCCChHHHhcCceEEe
Confidence 8999999999999999888 44579999993 477775 445544444 23 4566
Q ss_pred CCCCHHHHHHHHHHHhcCCH
Q 003042 489 NPWNVDAVADAMDSALQMEN 508 (854)
Q Consensus 489 nP~d~~~~A~ai~~aL~m~~ 508 (854)
|.|+++++++|.+++..++
T Consensus 318 -~~d~~~i~~ai~~ll~~~~ 336 (365)
T TIGR00236 318 -GTDKENITKAAKRLLTDPD 336 (365)
T ss_pred -CCCHHHHHHHHHHHHhChH
Confidence 6799999999999998653
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.8e-09 Score=121.00 Aligned_cols=258 Identities=14% Similarity=0.082 Sum_probs=158.0
Q ss_pred HHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHH
Q 003042 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHF 261 (854)
Q Consensus 182 ~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~F 261 (854)
++++..+| |+|..|.....+ +..+..+..+.|+.++.|..+|.. .+.++- -.+|.+-..+.+- +
T Consensus 85 ~~ik~~~p--Dvv~~~~~~~~~-~~~~~~~~~~~p~v~~~~~~~~~~--------~~r~~~--~~~d~ii~~~~~~---~ 148 (357)
T PRK00726 85 KILKRFKP--DVVVGFGGYVSG-PGGLAARLLGIPLVIHEQNAVPGL--------ANKLLA--RFAKKVATAFPGA---F 148 (357)
T ss_pred HHHHhcCC--CEEEECCCcchh-HHHHHHHHcCCCEEEEcCCCCccH--------HHHHHH--HHhchheECchhh---h
Confidence 34556677 999999855433 344545566788888777555431 011111 1244443333210 0
Q ss_pred HHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCH
Q 003042 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGI 341 (854)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi 341 (854)
. . ....++.++|+|+|.+.+.. +.. ...+ ..-.+.++|+.+++....|++
T Consensus 149 ~--------------------~--~~~~~i~vi~n~v~~~~~~~----~~~---~~~~-~~~~~~~~i~~~gg~~~~~~~ 198 (357)
T PRK00726 149 P--------------------E--FFKPKAVVTGNPVREEILAL----AAP---PARL-AGREGKPTLLVVGGSQGARVL 198 (357)
T ss_pred h--------------------c--cCCCCEEEECCCCChHhhcc----cch---hhhc-cCCCCCeEEEEECCcHhHHHH
Confidence 0 0 12246788999999876542 110 0111 111367888999999999998
Q ss_pred HHHH-HHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHH
Q 003042 342 SLKF-LAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (854)
Q Consensus 342 ~~~l-~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly 420 (854)
...+ +|++++.+. | .+++++|. ++. +++.+.+ . . +.. +. +.+.+ +++..+|
T Consensus 199 ~~~l~~a~~~~~~~-~-----~~~~~~G~-----g~~-~~~~~~~--------~-~---~~~-v~-~~g~~--~~~~~~~ 250 (357)
T PRK00726 199 NEAVPEALALLPEA-L-----QVIHQTGK-----GDL-EEVRAAY--------A-A---GIN-AE-VVPFI--DDMAAAY 250 (357)
T ss_pred HHHHHHHHHHhhhC-c-----EEEEEcCC-----CcH-HHHHHHh--------h-c---CCc-EE-EeehH--hhHHHHH
Confidence 7776 888777432 2 34555553 221 2332221 1 1 122 33 44544 6899999
Q ss_pred HhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccc--------cccC---CCceEeC
Q 003042 421 AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC--------SPSL---SGAIRVN 489 (854)
Q Consensus 421 ~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--------~~~l---~~ai~vn 489 (854)
+.||+++.+| | +.+.+|||+|+ -|+|++-..|. ++.+ ..|++++
T Consensus 251 ~~~d~~i~~~---g-~~~~~Ea~~~g---------------------~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~ 305 (357)
T PRK00726 251 AAADLVICRA---G-ASTVAELAAAG---------------------LPAILVPLPHAADDHQTANARALVDAGAALLIP 305 (357)
T ss_pred HhCCEEEECC---C-HHHHHHHHHhC---------------------CCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEE
Confidence 9999999877 3 57899999993 47777654321 2233 3378888
Q ss_pred CCC--HHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHH
Q 003042 490 PWN--VDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLE 539 (854)
Q Consensus 490 P~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 539 (854)
|.| +++++++|.+++.++ +.++...+..+++..+.+...-++.+++.+.
T Consensus 306 ~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 306 QSDLTPEKLAEKLLELLSDP-ERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred cccCCHHHHHHHHHHHHcCH-HHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 888 999999999999875 4555566666777888888888887776553
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.09 E-value=9.6e-09 Score=115.29 Aligned_cols=254 Identities=15% Similarity=0.081 Sum_probs=145.7
Q ss_pred HHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecC--CCCChhhhhcCCCh--HHHHHHhhcCCe
Q 003042 174 SANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHS--PFPSSEIYRTLPVR--DEILKSLLNSDL 249 (854)
Q Consensus 174 ~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~--pfP~~e~~~~lp~r--~eil~~ll~~dl 249 (854)
.....+.+.+.+. +| |+|++|.+....++..+..+..++|+..+.|- +|- +..|+. ...+.. .+|.
T Consensus 75 ~~~~~l~~~l~~~-~p--DvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~-----~~~~~~~~r~~~~~--~ad~ 144 (363)
T cd03786 75 GLLIGLEAVLLEE-KP--DLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD-----RGMPDEENRHAIDK--LSDL 144 (363)
T ss_pred HHHHHHHHHHHHh-CC--CEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC-----CCCCchHHHHHHHH--Hhhh
Confidence 3444555555554 77 89999988777777666666667888765542 120 001111 111111 3566
Q ss_pred EeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEecccc-CchHHHhhhCCchHHHHHHHHHHHc---CC
Q 003042 250 IGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGI-HMGQFESIMSLDVTGQKVKELKEKF---DG 325 (854)
Q Consensus 250 igf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GI-d~~~~~~~~~~~~~~~~~~~l~~~~---~~ 325 (854)
+-.-+....+++.+ .| ....+|.++++++ |...+..... + ....++.+ .+
T Consensus 145 ~~~~s~~~~~~l~~-----~G---------------~~~~kI~vign~v~d~~~~~~~~~-~-----~~~~~~~~~~~~~ 198 (363)
T cd03786 145 HFAPTEEARRNLLQ-----EG---------------EPPERIFVVGNTMIDALLRLLELA-K-----KELILELLGLLPK 198 (363)
T ss_pred ccCCCHHHHHHHHH-----cC---------------CCcccEEEECchHHHHHHHHHHhh-c-----cchhhhhcccCCC
Confidence 55555444444332 12 1233566777764 5443321111 0 01111222 24
Q ss_pred CEEEEEecCccc---cCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCc
Q 003042 326 KIVILGVDDMDL---FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (854)
Q Consensus 326 ~~iil~VdRld~---~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~ 402 (854)
+.+++.++|+.. .||+..+++|++++.+. ++.++..+. ++....+++. +.+.+.. .
T Consensus 199 ~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~------~~~vi~~~~-----~~~~~~l~~~----~~~~~~~------~ 257 (363)
T cd03786 199 KYILVTLHRVENVDDGEQLEEILEALAELAEE------DVPVVFPNH-----PRTRPRIREA----GLEFLGH------H 257 (363)
T ss_pred CEEEEEeCCccccCChHHHHHHHHHHHHHHhc------CCEEEEECC-----CChHHHHHHH----HHhhccC------C
Confidence 557788999875 79999999999887542 233444332 2222334333 3332210 1
Q ss_pred cEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC
Q 003042 403 PIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (854)
Q Consensus 403 pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (854)
+.+.+.+....+++..+|+.||++|.+|- | +..|+++|+ .|+|++...+..+++
T Consensus 258 ~~v~~~~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g---------------------~PvI~~~~~~~~~~~ 311 (363)
T cd03786 258 PNVLLISPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFLG---------------------VPVLNLRDRTERPET 311 (363)
T ss_pred CCEEEECCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcC---------------------CCEEeeCCCCccchh
Confidence 23345555678899999999999999994 4 468999983 478887665645444
Q ss_pred -CCceEeCC-CCHHHHHHHHHHHhcCCHHH
Q 003042 483 -SGAIRVNP-WNVDAVADAMDSALQMENQE 510 (854)
Q Consensus 483 -~~ai~vnP-~d~~~~A~ai~~aL~m~~~e 510 (854)
..|+.+.+ .|.++++++|.++++.+...
T Consensus 312 ~~~g~~~~~~~~~~~i~~~i~~ll~~~~~~ 341 (363)
T cd03786 312 VESGTNVLVGTDPEAILAAIEKLLSDEFAY 341 (363)
T ss_pred hheeeEEecCCCHHHHHHHHHHHhcCchhh
Confidence 44544433 37999999999999876543
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.9e-09 Score=116.88 Aligned_cols=180 Identities=14% Similarity=0.099 Sum_probs=115.5
Q ss_pred EEeccccCchHHHhhhCCchHHHHHHHHHHHc-CCCEEEEEecCccccCCHHHH-HHHHHHHHHhCCCCCCcEEEEEEec
Q 003042 292 KILPVGIHMGQFESIMSLDVTGQKVKELKEKF-DGKIVILGVDDMDLFKGISLK-FLAMGQLLEQHPDLRGKVVLVQITN 369 (854)
Q Consensus 292 ~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iil~VdRld~~KGi~~~-l~A~~~ll~~~p~~~~~vvLvqi~~ 369 (854)
.++|+|+|...+... + . ..++ .. +++++|+++||....|++... +.|++++.+. +++ ++.+++
T Consensus 153 ~~i~n~v~~~~~~~~---~-~---~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~----~~~~~g 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP---V-P---RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQ----IVHQTG 217 (348)
T ss_pred eEEcCCcCHHHhccc---c-h---hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcE----EEEECC
Confidence 578999987655321 0 0 1111 12 467889999998888987654 4788777542 222 333432
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCC
Q 003042 370 PARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGS 449 (854)
Q Consensus 370 p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~ 449 (854)
+++. +++++. +.+ .+...++.+. ..++..+|+.||++|.+| | +.+.+|||+|
T Consensus 218 ----~~~~-~~l~~~----~~~-------~~l~~~v~~~----~~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~---- 269 (348)
T TIGR01133 218 ----KNDL-EKVKNV----YQE-------LGIEAIVTFI----DENMAAAYAAADLVISRA---G-ASTVAELAAA---- 269 (348)
T ss_pred ----cchH-HHHHHH----Hhh-------CCceEEecCc----ccCHHHHHHhCCEEEECC---C-hhHHHHHHHc----
Confidence 2222 333333 322 2223344444 228899999999999865 4 6899999999
Q ss_pred CccccccCCCCCCCCCCCceEEEecCcccc-------ccC---CCceEeCCCC--HHHHHHHHHHHhcCCHHHHHHHHHH
Q 003042 450 PVLDRALGVDEKNPPQKKSVIIVSEFIGCS-------PSL---SGAIRVNPWN--VDAVADAMDSALQMENQEKILRHEK 517 (854)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~-------~~l---~~ai~vnP~d--~~~~A~ai~~aL~m~~~er~~r~~~ 517 (854)
+.|+|++...|.. +.+ ..|++++|.| +++++++|.++++.+ +.++.+.+.
T Consensus 270 -----------------g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~ 331 (348)
T TIGR01133 270 -----------------GVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDP-ANLEAMAEA 331 (348)
T ss_pred -----------------CCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCH-HHHHHHHHH
Confidence 3488887765532 233 3488898876 999999999999754 455566677
Q ss_pred HhccccccChHHHHH
Q 003042 518 HYKYISSHDVAYWAK 532 (854)
Q Consensus 518 ~~~~v~~~~~~~W~~ 532 (854)
.++++..+...++++
T Consensus 332 ~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 332 ARKLAKPDAAKRIAE 346 (348)
T ss_pred HHhcCCccHHHHHHh
Confidence 778887777666654
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.1e-08 Score=116.37 Aligned_cols=271 Identities=10% Similarity=0.075 Sum_probs=154.9
Q ss_pred HHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHH
Q 003042 180 ADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYAR 259 (854)
Q Consensus 180 a~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~ 259 (854)
..++++..+| |+|.++ +...++..+.+++..++|+. +.++-|-....| +- -.+|.+-..+....+
T Consensus 96 l~~~l~~~kP--DvVi~~-~p~~~~~~l~~~~~~~iP~~-~v~td~~~~~~w--------~~---~~~d~~~v~s~~~~~ 160 (391)
T PRK13608 96 LINLLIKEKP--DLILLT-FPTPVMSVLTEQFNINIPVA-TVMTDYRLHKNW--------IT---PYSTRYYVATKETKQ 160 (391)
T ss_pred HHHHHHHhCc--CEEEEC-CcHHHHHHHHHhcCCCCCEE-EEeCCCCccccc--------cc---CCCCEEEECCHHHHH
Confidence 4455566788 888886 22233333333444467774 344444111111 00 147887777655444
Q ss_pred HHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCC-EEEEEecCc
Q 003042 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGK-IVILGVDDM 335 (854)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~-~iil~VdRl 335 (854)
.+.+ .|+. ..+|.+.++.|+. .|.... + ...+++++ +++ .+++++||+
T Consensus 161 ~l~~-----~gi~---------------~~ki~v~GiPv~~-~f~~~~---~----~~~~~~~~~l~~~~~~ilv~~G~l 212 (391)
T PRK13608 161 DFID-----VGID---------------PSTVKVTGIPIDN-KFETPI---D----QKQWLIDNNLDPDKQTILMSAGAF 212 (391)
T ss_pred HHHH-----cCCC---------------HHHEEEECeecCh-Hhcccc---c----HHHHHHHcCCCCCCCEEEEECCCc
Confidence 4432 1221 1233444555553 332111 1 12333444 234 466789999
Q ss_pred cccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhh
Q 003042 336 DLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQD 415 (854)
Q Consensus 336 d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~e 415 (854)
...||+..+++++ ++..|+++ ++.+++ .++ ++.+++.+. .+. . ..++ +.|.+ ++
T Consensus 213 g~~k~~~~li~~~---~~~~~~~~----~vvv~G----~~~---~l~~~l~~~---~~~----~--~~v~-~~G~~--~~ 266 (391)
T PRK13608 213 GVSKGFDTMITDI---LAKSANAQ----VVMICG----KSK---ELKRSLTAK---FKS----N--ENVL-ILGYT--KH 266 (391)
T ss_pred ccchhHHHHHHHH---HhcCCCce----EEEEcC----CCH---HHHHHHHHH---hcc----C--CCeE-EEecc--ch
Confidence 9999999999885 34445543 655553 222 222232221 111 1 1243 44554 57
Q ss_pred HHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC------CCceEeC
Q 003042 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL------SGAIRVN 489 (854)
Q Consensus 416 l~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l------~~ai~vn 489 (854)
+..+|+.||++|.. +.|++..|||+|+ .|+|++...+..+.. +.|.-+-
T Consensus 267 ~~~~~~~aDl~I~k----~gg~tl~EA~a~G---------------------~PvI~~~~~pgqe~~N~~~~~~~G~g~~ 321 (391)
T PRK13608 267 MNEWMASSQLMITK----PGGITISEGLARC---------------------IPMIFLNPAPGQELENALYFEEKGFGKI 321 (391)
T ss_pred HHHHHHhhhEEEeC----CchHHHHHHHHhC---------------------CCEEECCCCCCcchhHHHHHHhCCcEEE
Confidence 99999999999863 4588999999993 488887543322221 2233333
Q ss_pred CCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHHHHHhc
Q 003042 490 PWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERACRDH 545 (854)
Q Consensus 490 P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 545 (854)
+.|.++++++|.++++.+ +++..+.+..++....++....++.+++.+...++.+
T Consensus 322 ~~~~~~l~~~i~~ll~~~-~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 322 ADTPEEAIKIVASLTNGN-EQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred eCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 669999999999999865 4555566667777778888888888887776655443
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.01 E-value=4.5e-10 Score=110.45 Aligned_cols=72 Identities=22% Similarity=0.234 Sum_probs=58.2
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecC--CCcccceEeCCH--hH-
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ--KPSMAKYYLDDT--AE- 825 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~--~~s~A~y~l~~~--~e- 825 (854)
+|..+++.+++++ |++++++++|||+.||++|++.+|.+ ++|..+. .+..|+|++.++ ++
T Consensus 76 ~k~~~~~~~~~~~---~~~~~~~~~vGDs~~D~~~~~~ag~~------------~~v~~~~~~~~~~a~~i~~~~~~~g~ 140 (154)
T TIGR01670 76 NKLIAFSDILEKL---ALAPENVAYIGDDLIDWPVMEKVGLS------------VAVADAHPLLIPRADYVTRIAGGRGA 140 (154)
T ss_pred chHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCe------------EecCCcCHHHHHhCCEEecCCCCCcH
Confidence 3889999999999 99999999999999999999999873 4444443 256789998765 33
Q ss_pred HHHHHHHHHhcc
Q 003042 826 VINLLEGLATES 837 (854)
Q Consensus 826 V~~~L~~l~~~~ 837 (854)
+.++++.+..+.
T Consensus 141 ~~~~~~~~~~~~ 152 (154)
T TIGR01670 141 VREVCELLLLAQ 152 (154)
T ss_pred HHHHHHHHHHhh
Confidence 888888887654
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=6.4e-10 Score=112.60 Aligned_cols=124 Identities=23% Similarity=0.313 Sum_probs=88.8
Q ss_pred cCCeEEEEecCCCCCCCC----CCCCCCCHHHH---HHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEE
Q 003042 583 TNSRLILLDYDGTVMPQT----SEDKRPSTEVL---SILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYF 655 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~----~~~~~is~~~~---~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~ 655 (854)
..+|+|++|+||||++.. .....+...+. .+++.| ++.|+.++|+|||+...+..+++. +++..
T Consensus 19 ~~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L-~~~Gi~v~I~T~~~~~~v~~~l~~---lgl~~----- 89 (183)
T PRK09484 19 ENIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCL-LTSGIEVAIITGRKSKLVEDRMTT---LGITH----- 89 (183)
T ss_pred hCceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHH-HHCCCEEEEEeCCCcHHHHHHHHH---cCCce-----
Confidence 359999999999999821 01333433333 688888 778999999999988777766632 11100
Q ss_pred EEECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEE
Q 003042 656 TRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVV 735 (854)
Q Consensus 656 I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~ 735 (854)
+ |.
T Consensus 90 --------------------------------------~-----------f~---------------------------- 92 (183)
T PRK09484 90 --------------------------------------L-----------YQ---------------------------- 92 (183)
T ss_pred --------------------------------------e-----------ec----------------------------
Confidence 0 00
Q ss_pred EEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC---
Q 003042 736 VKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK--- 812 (854)
Q Consensus 736 v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~--- 812 (854)
+ .-+|+.+++.+++.+ |++++++++|||+.||++|++.+|.. +.+++.
T Consensus 93 ---g---------~~~k~~~l~~~~~~~---gl~~~ev~~VGDs~~D~~~a~~aG~~--------------~~v~~~~~~ 143 (183)
T PRK09484 93 ---G---------QSNKLIAFSDLLEKL---AIAPEQVAYIGDDLIDWPVMEKVGLS--------------VAVADAHPL 143 (183)
T ss_pred ---C---------CCcHHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHHCCCe--------------EecCChhHH
Confidence 0 113678999999999 99999999999999999999999973 334543
Q ss_pred -CcccceEeC
Q 003042 813 -PSMAKYYLD 821 (854)
Q Consensus 813 -~s~A~y~l~ 821 (854)
...|+|++.
T Consensus 144 ~~~~a~~v~~ 153 (183)
T PRK09484 144 LLPRADYVTR 153 (183)
T ss_pred HHHhCCEEec
Confidence 356889886
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.8e-07 Score=110.73 Aligned_cols=181 Identities=11% Similarity=0.109 Sum_probs=123.4
Q ss_pred CCEEEEEecCccccCCHHHHHHHHHHHHH--hCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCc
Q 003042 325 GKIVILGVDDMDLFKGISLKFLAMGQLLE--QHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE 402 (854)
Q Consensus 325 ~~~iil~VdRld~~KGi~~~l~A~~~ll~--~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~ 402 (854)
+..++..|.|+...||+.+.+.+++++++ ++|+. .+.+|..|...-.+.. -.++.+.+.+++.+ -.+. +
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~~-gk~~i~~i~~la~~--~~~~--~-- 458 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADGE-GKEIIQRIVEFSKR--PEFR--G-- 458 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccch-HHHHHHHHHHHHhc--ccCC--C--
Confidence 55689999999999999999999999986 55552 4777777754322211 13444555554432 0121 1
Q ss_pred cEEEEcCCCChhhHHHHHHhCcEEEE-ccC-ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccc
Q 003042 403 PIVIIKEPLSTQDKVPYYAIAECCVV-NCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP 480 (854)
Q Consensus 403 pv~~~~~~~~~~el~aly~~ADv~vv-~S~-~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 480 (854)
.|+++.+ .+..--..+|++||+++. ||. .|.-|+.-+-||.- |.|..|-.-|...
T Consensus 459 kv~f~~~-Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n----------------------GgL~~sv~DG~~~ 515 (601)
T TIGR02094 459 RIVFLEN-YDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN----------------------GVLNLSILDGWWG 515 (601)
T ss_pred CEEEEcC-CCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc----------------------CCceeecccCccc
Confidence 3666664 444444578999999999 777 89999988777773 6677777777655
Q ss_pred cC---CCceEeCC------------CCHHHHHHHHHHHh-c----C-----CHHHHHHHHHHHhccccccChHHHHHHHH
Q 003042 481 SL---SGAIRVNP------------WNVDAVADAMDSAL-Q----M-----ENQEKILRHEKHYKYISSHDVAYWAKSID 535 (854)
Q Consensus 481 ~l---~~ai~vnP------------~d~~~~A~ai~~aL-~----m-----~~~er~~r~~~~~~~v~~~~~~~W~~~~l 535 (854)
+. .+|+.+.+ .|.+++-++|.+++ . . |..-.+.+.+.|......+++.+.++++.
T Consensus 516 E~~~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~ 595 (601)
T TIGR02094 516 EGYDGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYV 595 (601)
T ss_pred ccCCCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHH
Confidence 54 24788875 89999999998887 2 2 22233445555555555689888888876
Q ss_pred HH
Q 003042 536 QD 537 (854)
Q Consensus 536 ~~ 537 (854)
..
T Consensus 596 ~~ 597 (601)
T TIGR02094 596 DK 597 (601)
T ss_pred HH
Confidence 54
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.9e-08 Score=104.75 Aligned_cols=315 Identities=15% Similarity=0.230 Sum_probs=189.5
Q ss_pred ChhcHHHHHHHHHHHHHHHHHh-----cCCCCCeEEEeCccc-chHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChH
Q 003042 165 DRGEWQAYLSANKVFADKVMEV-----INPDEDYVWIHDYHL-MVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRD 238 (854)
Q Consensus 165 ~~~~w~~Y~~vN~~fa~~i~~~-----~~~~~D~vwihDyhl-~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~ 238 (854)
+...|..+.-.-|..+..|+.. ..|+ |||-.--. .-.|.+-| +.++|+|-+.|-|--|.+....+-.|+
T Consensus 122 ea~~~~hfTllgQaigsmIl~~Eai~r~~Pd---i~IDtMGY~fs~p~~r~--l~~~~V~aYvHYP~iS~DML~~l~qrq 196 (465)
T KOG1387|consen 122 EASTWKHFTLLGQAIGSMILAFEAIIRFPPD---IFIDTMGYPFSYPIFRR--LRRIPVVAYVHYPTISTDMLKKLFQRQ 196 (465)
T ss_pred ecccccceehHHHHHHHHHHHHHHHHhCCch---heEecCCCcchhHHHHH--HccCceEEEEecccccHHHHHHHHhhh
Confidence 3445666666666666555431 2353 78853221 22344433 668999999997765666655443332
Q ss_pred HHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCcc-------ccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCch
Q 003042 239 EILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLN-------YESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDV 311 (854)
Q Consensus 239 eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~-------~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~ 311 (854)
+- + +...---.|-|-|..--.- .|.- ..=.+.+|.--+..+++++ |+|+. +++.+.+...+
T Consensus 197 ~s--~-----~l~~~KlaY~rlFa~lY~~-~G~~ad~vm~NssWT~nHI~qiW~~~~~~i-VyPPC-~~e~lks~~~t-- 264 (465)
T KOG1387|consen 197 KS--G-----ILVWGKLAYWRLFALLYQS-AGSKADIVMTNSSWTNNHIKQIWQSNTCSI-VYPPC-STEDLKSKFGT-- 264 (465)
T ss_pred hc--c-----hhhhHHHHHHHHHHHHHHh-ccccceEEEecchhhHHHHHHHhhccceeE-EcCCC-CHHHHHHHhcc--
Confidence 11 1 1111223455555321111 1210 0000112211233333333 44433 33333322111
Q ss_pred HHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCC--CCCcEEEEEEecCCCCChhHHHHHHHHHHHHH
Q 003042 312 TGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPD--LRGKVVLVQITNPARSSGKDVQDLLSDTNRIA 389 (854)
Q Consensus 312 ~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~--~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v 389 (854)
.-+....+|+++.+-|.|+.. .|+-+...+.+.|. .-.++.|+++|+ .|+ ++-++.-+.++.++
T Consensus 265 ----------e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGS-cRn--eeD~ervk~Lkd~a 330 (465)
T KOG1387|consen 265 ----------EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGS-CRN--EEDEERVKSLKDLA 330 (465)
T ss_pred ----------cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEec-cCC--hhhHHHHHHHHHHH
Confidence 012456899999999999999 77777778888887 334677887775 333 23334455566666
Q ss_pred HHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCce
Q 003042 390 EEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSV 469 (854)
Q Consensus 390 ~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~ 469 (854)
.+++ .+..+-|.-.+|.+++..+|..|-+-|-+-..|-||+.+.||||+ |.
T Consensus 331 ~~L~-------i~~~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAA----------------------Gl 381 (465)
T KOG1387|consen 331 EELK-------IPKHVQFEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAA----------------------GL 381 (465)
T ss_pred HhcC-------CccceEEEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhc----------------------Cc
Confidence 6644 223355666899999999999999999999999999999999998 33
Q ss_pred EEEecCcc-cc-ccC---C---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHHH
Q 003042 470 IIVSEFIG-CS-PSL---S---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541 (854)
Q Consensus 470 lV~Se~~G-~~-~~l---~---~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 541 (854)
+.++..+| .. ..+ . .|++. | +.++-|++|.+++++..+||....+..+..+.+++-+..-++|.+.+...
T Consensus 382 Ipi~h~SgGP~lDIV~~~~G~~tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kl 459 (465)
T KOG1387|consen 382 IPIVHNSGGPLLDIVTPWDGETTGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICKL 459 (465)
T ss_pred eEEEeCCCCCceeeeeccCCccceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHh
Confidence 33333333 21 111 1 25665 3 57889999999999999998887777787787787777777777655544
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.88 E-value=7.2e-08 Score=109.04 Aligned_cols=141 Identities=17% Similarity=0.213 Sum_probs=91.2
Q ss_pred HHHHcC---CCEE-EEEe-cCccccCC-HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHH
Q 003042 319 LKEKFD---GKIV-ILGV-DDMDLFKG-ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEI 392 (854)
Q Consensus 319 l~~~~~---~~~i-il~V-dRld~~KG-i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~I 392 (854)
+++++. ++++ ++.. +|....|+ +...++|++.+.+++|+++ +++++. +++..+++++ ++.+
T Consensus 176 ~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~~----~~~~~~~~~~----~~~~- 242 (380)
T PRK00025 176 ARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPLV----NPKRREQIEE----ALAE- 242 (380)
T ss_pred HHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecC----ChhhHHHHHH----HHhh-
Confidence 444442 4444 3433 47766544 6889999999988888654 666653 1222233333 3322
Q ss_pred hhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEE
Q 003042 393 NLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIV 472 (854)
Q Consensus 393 n~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~ 472 (854)
++ +.. +.++. .++..+|+.||++|.+| |.+.+|+|+|+ .|+|+
T Consensus 243 ---~~--~~~-v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G---------------------~PvI~ 285 (380)
T PRK00025 243 ---YA--GLE-VTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLK---------------------VPMVV 285 (380)
T ss_pred ---cC--CCC-eEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhC---------------------CCEEE
Confidence 10 111 33333 47899999999999998 67788999993 47777
Q ss_pred e-----------------cCccccccCCC-----ceEeCCCCHHHHHHHHHHHhcCCHH
Q 003042 473 S-----------------EFIGCSPSLSG-----AIRVNPWNVDAVADAMDSALQMENQ 509 (854)
Q Consensus 473 S-----------------e~~G~~~~l~~-----ai~vnP~d~~~~A~ai~~aL~m~~~ 509 (854)
+ .+.|..+.+.+ +++++..|++++++++.++|+.++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~ 344 (380)
T PRK00025 286 GYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGAR 344 (380)
T ss_pred EEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHH
Confidence 6 34444555532 3677888999999999999987653
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=98.85 E-value=4.9e-09 Score=100.11 Aligned_cols=128 Identities=19% Similarity=0.258 Sum_probs=88.0
Q ss_pred CEEEEEecCccccCCHHHHHH-HHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccE
Q 003042 326 KIVILGVDDMDLFKGISLKFL-AMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (854)
Q Consensus 326 ~~iil~VdRld~~KGi~~~l~-A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv 404 (854)
..+|++.|++.+.||+..+++ |++++.+++|+++ |+.+|... + + +.++ .. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~----l~i~G~~~-----~--~----l~~~-~~----------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIE----LIIIGNGP-----D--E----LKRL-RR----------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEE----EEEECESS--------H----HCCH-HH----------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEE----EEEEeCCH-----H--H----HHHh-cC----------CCE
Confidence 357899999999999999999 9999999999654 88777522 2 1 2211 00 124
Q ss_pred EEEcCCCChhhHHHHHHhCcEEEEccC-ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC
Q 003042 405 VIIKEPLSTQDKVPYYAIAECCVVNCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS 483 (854)
Q Consensus 405 ~~~~~~~~~~el~aly~~ADv~vv~S~-~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 483 (854)
.+ .+.+ +|+.++|+.||+++.|+. .+|++...+|||++ |.|+|+|.. |+...+.
T Consensus 56 ~~-~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~---------------------G~pvi~~~~-~~~~~~~ 110 (135)
T PF13692_consen 56 RF-HGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAA---------------------GKPVIASDN-GAEGIVE 110 (135)
T ss_dssp EE-E-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCT---------------------T--EEEEHH-HCHCHS-
T ss_pred EE-cCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHh---------------------CCCEEECCc-chhhhee
Confidence 44 4455 689999999999999985 78999999999999 458888888 6655552
Q ss_pred ---CceEeCCCCHHHHHHHHHHHhc
Q 003042 484 ---GAIRVNPWNVDAVADAMDSALQ 505 (854)
Q Consensus 484 ---~ai~vnP~d~~~~A~ai~~aL~ 505 (854)
.++.+ +.|.++++++|.+++.
T Consensus 111 ~~~~~~~~-~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 111 EDGCGVLV-ANDPEELAEAIERLLN 134 (135)
T ss_dssp --SEEEE--TT-HHHHHHHHHHHHH
T ss_pred ecCCeEEE-CCCHHHHHHHHHHHhc
Confidence 36666 8899999999999875
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.5e-09 Score=111.09 Aligned_cols=68 Identities=15% Similarity=0.220 Sum_probs=58.4
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------CcccceEeCCHh
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------PSMAKYYLDDTA 824 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------~s~A~y~l~~~~ 824 (854)
.|...++++++++ |.+++++++|||+.+|+.+.+.+|.. +++|.+|.. ...|+|++++..
T Consensus 139 p~p~~~~~~~~~~---~~~~~~~~~iGDs~~Di~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~~~~~i~~~~ 204 (214)
T PRK13288 139 PDPEPVLKALELL---GAKPEEALMVGDNHHDILAGKNAGTK-----------TAGVAWTIKGREYLEQYKPDFMLDKMS 204 (214)
T ss_pred CCcHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCe-----------EEEEcCCCCCHHHHhhcCcCEEECCHH
Confidence 4788999999999 99999999999999999999999973 578888853 235889999999
Q ss_pred HHHHHHHH
Q 003042 825 EVINLLEG 832 (854)
Q Consensus 825 eV~~~L~~ 832 (854)
++.+++..
T Consensus 205 ~l~~~i~~ 212 (214)
T PRK13288 205 DLLAIVGD 212 (214)
T ss_pred HHHHHHhh
Confidence 99888754
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.4e-09 Score=109.79 Aligned_cols=84 Identities=23% Similarity=0.263 Sum_probs=66.6
Q ss_pred CCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEec
Q 003042 731 NEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVG 810 (854)
Q Consensus 731 ~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG 810 (854)
.++..+..+.....-+| +...+..+++.+ |.+++++++|||+.+|+.|.+++|. .+++|++|
T Consensus 130 ~~F~~i~g~~~~~~~KP----~P~~l~~~~~~~---~~~~~~~l~VGDs~~Di~aA~~Ag~-----------~~v~v~~g 191 (220)
T COG0546 130 DYFDVIVGGDDVPPPKP----DPEPLLLLLEKL---GLDPEEALMVGDSLNDILAAKAAGV-----------PAVGVTWG 191 (220)
T ss_pred cccceEEcCCCCCCCCc----CHHHHHHHHHHh---CCChhheEEECCCHHHHHHHHHcCC-----------CEEEEECC
Confidence 44444445455555555 778889999998 8888899999999999999999996 35899998
Q ss_pred CC------CcccceEeCCHhHHHHHHHH
Q 003042 811 QK------PSMAKYYLDDTAEVINLLEG 832 (854)
Q Consensus 811 ~~------~s~A~y~l~~~~eV~~~L~~ 832 (854)
.. ...|+++++++.++...|..
T Consensus 192 ~~~~~~l~~~~~d~vi~~~~el~~~l~~ 219 (220)
T COG0546 192 YNSREELAQAGADVVIDSLAELLALLAE 219 (220)
T ss_pred CCCCcchhhcCCCEEECCHHHHHHHHhc
Confidence 63 35799999999999888753
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=9.5e-08 Score=104.93 Aligned_cols=65 Identities=18% Similarity=0.172 Sum_probs=54.1
Q ss_pred cchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC---CcccceEeC--CHh
Q 003042 750 VSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK---PSMAKYYLD--DTA 824 (854)
Q Consensus 750 vsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~---~s~A~y~l~--~~~ 824 (854)
..|+.+++.+++++ |++++++++|||+.||++|++.+|. +|++..+ +..|++.++ +.+
T Consensus 247 k~K~~~L~~la~~l---gi~~~qtIaVGDg~NDl~m~~~AGl--------------giA~nAkp~Vk~~Ad~~i~~~~l~ 309 (322)
T PRK11133 247 QYKADTLTRLAQEY---EIPLAQTVAIGDGANDLPMIKAAGL--------------GIAYHAKPKVNEQAQVTIRHADLM 309 (322)
T ss_pred ccHHHHHHHHHHHc---CCChhhEEEEECCHHHHHHHHHCCC--------------eEEeCCCHHHHhhCCEEecCcCHH
Confidence 46999999999999 9999999999999999999999996 4566333 478999987 466
Q ss_pred HHHHHHH
Q 003042 825 EVINLLE 831 (854)
Q Consensus 825 eV~~~L~ 831 (854)
+|+.+|.
T Consensus 310 ~~l~~~~ 316 (322)
T PRK11133 310 GVLCILS 316 (322)
T ss_pred HHHHHhc
Confidence 7776664
|
|
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.1e-07 Score=92.90 Aligned_cols=221 Identities=19% Similarity=0.273 Sum_probs=144.8
Q ss_pred HHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcC-C-ccc-ceeecCcEE
Q 003042 579 AYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG-V-EKL-GLSAEHGYF 655 (854)
Q Consensus 579 ~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~-~-~~l-~liaenG~~ 655 (854)
++++...-|+.||.||||++ ....+++++.+.|+.| .+...+.++-|-....+.+-++. + ... ...+|||..
T Consensus 5 a~~r~~~~l~lfdvdgtLt~---~r~~~~~e~~~~l~~l--r~~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~ 79 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTP---PRQKVTPEMLEFLQKL--RKKVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLV 79 (252)
T ss_pred hhhcCCceEEEEecCCcccc---ccccCCHHHHHHHHHH--hhheEEEEeecHHHHHHHHHhchhHHhhhcccccCCCee
Confidence 55677778999999999999 8899999999999998 46788889999888777766643 1 222 345799988
Q ss_pred EEECCCcceEEc-cccc-cchHHHHHHHHHHHHhc----cCCcceEecccceEEEee--ccCCCc----cc-----hhhH
Q 003042 656 TRWSKNSAWEIC-SLTR-DFDWKEIAEPVMKLYTE----TTDGSFIEDKETAIVWHH--QHADPH----FG-----SCQA 718 (854)
Q Consensus 656 I~~~~~~~~~~~-~~~~-~~~~~~~v~~~~~~y~~----~~~g~~ie~k~~~l~~~~--~~~d~~----~~-----~~~~ 718 (854)
-+..|...-... .... +..+++.+.-.+.+..+ ..-|.++|-++..+.... +++..+ |. ..-.
T Consensus 80 ~yk~gk~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk~~iR 159 (252)
T KOG3189|consen 80 AYKGGKLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKKHKIR 159 (252)
T ss_pred EeeCCcchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhhhhhH
Confidence 777665321111 0000 11122333323333332 245889988877666542 222211 11 1112
Q ss_pred HHHHHHHHHHhcCCCEE-EEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeC----CcccHHHHHHhhhhc
Q 003042 719 KELLDHLENVLANEPVV-VKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGD----DRSDEDMFESIEQAV 793 (854)
Q Consensus 719 ~el~~~l~~~l~~~~~~-v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD----s~ND~~Mf~~ag~~~ 793 (854)
+.+.+.|++.+.++.+. .+.|.-.++|.|.|++|-.-++++-+. ..+.+.+||| +.||.+.|..-..
T Consensus 160 ~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d------gf~~IhFFGDkT~~GGNDyEIf~dprt-- 231 (252)
T KOG3189|consen 160 EKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD------GFDTIHFFGDKTMPGGNDYEIFADPRT-- 231 (252)
T ss_pred HHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc------CCceEEEeccccCCCCCcceeeeCCcc--
Confidence 34667788888877654 467788999999999998877776543 3689999999 6899998865432
Q ss_pred CCCCCCCCccEEEEEecCCCcccceEeCCHhHHHHHHHHHH
Q 003042 794 ADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLA 834 (854)
Q Consensus 794 ~~~~~~~~~~~~aV~vG~~~s~A~y~l~~~~eV~~~L~~l~ 834 (854)
++-+ +.+|++..+.++.+.
T Consensus 232 -----------iGhs-----------V~~PdDT~~~~~~if 250 (252)
T KOG3189|consen 232 -----------IGHS-----------VTSPDDTVRICEEIF 250 (252)
T ss_pred -----------cccc-----------ccCchHHHHHHHHHh
Confidence 2333 446777777776654
|
|
| >PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5 | Back alignment and domain information |
|---|
Probab=98.77 E-value=1e-07 Score=96.51 Aligned_cols=193 Identities=19% Similarity=0.286 Sum_probs=127.2
Q ss_pred HHHHHHHcccCCCCeEEEEcCCCccchhhhhc-C-C-cc-cceeecCcEEEEECCCcceEEcccc-cc-chHHHHHHHHH
Q 003042 610 VLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS-G-V-EK-LGLSAEHGYFTRWSKNSAWEICSLT-RD-FDWKEIAEPVM 683 (854)
Q Consensus 610 ~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~-~-~-~~-l~liaenG~~I~~~~~~~~~~~~~~-~~-~~~~~~v~~~~ 683 (854)
+.+.|.+| . +...|.|+||-....+.+-+. . + .. ..+.++||...+..+...|...+.. .. ...++.+.-++
T Consensus 1 M~~~L~~L-~-~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKL-R-KKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHH-H-TTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHH-H-hcCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 35677887 3 579999999999998887773 2 2 22 2577999999999988888765421 11 12233333333
Q ss_pred HHHhc----cCCcceEecccceEEEee--ccCCCc----cch----hh-HHHHHHHHHHHhcCCCE-EEEEcCeEEEEee
Q 003042 684 KLYTE----TTDGSFIEDKETAIVWHH--QHADPH----FGS----CQ-AKELLDHLENVLANEPV-VVKRGQHIVEVKP 747 (854)
Q Consensus 684 ~~y~~----~~~g~~ie~k~~~l~~~~--~~~d~~----~~~----~~-~~el~~~l~~~l~~~~~-~v~~g~~~vEI~p 747 (854)
.+..+ ..-|.++|.+...+.+.. +++..+ |.. .. .+.+++.|++.+.+..+ .-+.|...++|.|
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp 158 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFP 158 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEcccc
Confidence 33221 245899999999888753 223211 110 11 23466778888887665 4567899999999
Q ss_pred CCcchHHHHHHHHHHHhhCCCCCCeEEEEeC----CcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCCcccceEeCCH
Q 003042 748 QGVSKGIVVKNLISTMRSRGKSPDFVLCIGD----DRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDT 823 (854)
Q Consensus 748 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD----s~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~s~A~y~l~~~ 823 (854)
+|++|..++++|.+. ..+++++||| +.||.+.|...+. .+.+ |.+|
T Consensus 159 ~GwDKty~Lr~l~~~------~~~~I~FfGDkt~pGGNDyei~~~~rt-------------~g~~-----------V~~p 208 (220)
T PF03332_consen 159 KGWDKTYCLRHLEDE------GFDEIHFFGDKTFPGGNDYEIFEDPRT-------------IGHT-----------VTSP 208 (220)
T ss_dssp TT-SGGGGGGGTTTT------T-SEEEEEESS-STTSTTHHHHHSTTS-------------EEEE------------SSH
T ss_pred CCccHHHHHHHHHhc------ccceEEEEehhccCCCCCceeeecCCc-------------cEEE-----------eCCH
Confidence 999999999988653 2799999999 6899999987654 4555 6789
Q ss_pred hHHHHHHHHHH
Q 003042 824 AEVINLLEGLA 834 (854)
Q Consensus 824 ~eV~~~L~~l~ 834 (854)
++.++.|+.|.
T Consensus 209 ~DT~~~l~~l~ 219 (220)
T PF03332_consen 209 EDTIKQLKELF 219 (220)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998875
|
4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.4e-08 Score=100.91 Aligned_cols=138 Identities=20% Similarity=0.222 Sum_probs=96.8
Q ss_pred CCeEEEEecCCCCCCCC---CC----CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEE
Q 003042 584 NSRLILLDYDGTVMPQT---SE----DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFT 656 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~---~~----~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I 656 (854)
.+|+++||+||||++.. .. .+..+..--.+|+.| ++.|+.++|+|+++...+...+.. +++.
T Consensus 6 ~i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L-~~~Gi~laIiT~k~~~~~~~~l~~---lgi~------- 74 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVL-QLCGIDVAIITSKKSGAVRHRAEE---LKIK------- 74 (169)
T ss_pred cCeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHH-HHCCCEEEEEECCCcHHHHHHHHH---CCCc-------
Confidence 38999999999999831 01 122455566778888 778999999999987777776622 2210
Q ss_pred EECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEE
Q 003042 657 RWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVV 736 (854)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v 736 (854)
.|. .
T Consensus 75 ------~~f-----------------------------------------~----------------------------- 78 (169)
T TIGR02726 75 ------RFH-----------------------------------------E----------------------------- 78 (169)
T ss_pred ------EEE-----------------------------------------e-----------------------------
Confidence 000 0
Q ss_pred EEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----
Q 003042 737 KRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK---- 812 (854)
Q Consensus 737 ~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~---- 812 (854)
.++ .|...++.+++++ |++++++++|||+.||++|++.+|. +++++++
T Consensus 79 -------~~k----pkp~~~~~~~~~l---~~~~~ev~~iGD~~nDi~~~~~ag~--------------~~am~nA~~~l 130 (169)
T TIGR02726 79 -------GIK----KKTEPYAQMLEEM---NISDAEVCYVGDDLVDLSMMKRVGL--------------AVAVGDAVADV 130 (169)
T ss_pred -------cCC----CCHHHHHHHHHHc---CcCHHHEEEECCCHHHHHHHHHCCC--------------eEECcCchHHH
Confidence 002 3778899999999 9999999999999999999999997 4555553
Q ss_pred CcccceEeCC--Hh-HHHHHHHHHHhc
Q 003042 813 PSMAKYYLDD--TA-EVINLLEGLATE 836 (854)
Q Consensus 813 ~s~A~y~l~~--~~-eV~~~L~~l~~~ 836 (854)
+..|+|++.+ .+ .+..+++.+++.
T Consensus 131 k~~A~~I~~~~~~~g~v~e~~e~il~~ 157 (169)
T TIGR02726 131 KEAAAYVTTARGGHGAVREVAELILKA 157 (169)
T ss_pred HHhCCEEcCCCCCCCHHHHHHHHHHHh
Confidence 5788998753 22 356666666553
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.8e-07 Score=99.99 Aligned_cols=65 Identities=15% Similarity=0.219 Sum_probs=52.9
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEEEecC-C-------CcccceEeCC
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFACTVGQ-K-------PSMAKYYLDD 822 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~-~-------~s~A~y~l~~ 822 (854)
+....+.+++++ |.+++++++|||+. +|+.+.+.+|.. .+.|..|. . ...++|++++
T Consensus 181 ~p~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~~~G~~-----------~i~v~~G~~~~~~~~~~~~~pd~~~~s 246 (257)
T TIGR01458 181 SKTFFLEALRAT---GCEPEEAVMIGDDCRDDVGGAQDCGMR-----------GIQVRTGKYRPSDEEKINVPPDLTCDS 246 (257)
T ss_pred CHHHHHHHHHHh---CCChhhEEEECCCcHHHHHHHHHcCCe-----------EEEECCCCCChHHhcccCCCCCEEECC
Confidence 566788888888 99999999999996 999999999973 46677773 1 2357899999
Q ss_pred HhHHHHHH
Q 003042 823 TAEVINLL 830 (854)
Q Consensus 823 ~~eV~~~L 830 (854)
..++.++|
T Consensus 247 l~el~~~l 254 (257)
T TIGR01458 247 LPHAVDLI 254 (257)
T ss_pred HHHHHHHH
Confidence 99988765
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.1e-07 Score=102.15 Aligned_cols=249 Identities=13% Similarity=0.042 Sum_probs=138.3
Q ss_pred HHHhcCCCCCeEEEeCcccch--HHHHH-Hh-ccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHH
Q 003042 183 VMEVINPDEDYVWIHDYHLMV--LPSFL-RK-RFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYA 258 (854)
Q Consensus 183 i~~~~~~~~D~vwihDyhl~l--lp~~l-r~-~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~ 258 (854)
++..++| +|+|.+|..-+.. ++..+ ++ +..++|+.+++|.-||..-... -.........+-.||.|..++....
T Consensus 58 ~~~~~~~-~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~-~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKP-GDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSN-YYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCC-CCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhcccc-chhhHHHHHHHHhCCEEEECCHHHH
Confidence 4555777 4999998754321 22222 11 1126999999998777421111 0012233444556899999988766
Q ss_pred HHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCcccc
Q 003042 259 RHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLF 338 (854)
Q Consensus 259 ~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~ 338 (854)
+.+.+ .|+. ..++.+.|+..+..... .+....+++.|+++||+...
T Consensus 136 ~~l~~-----~g~~---------------~~~i~~~~~~~~~~~~~--------------~~~~~~~~~~i~yaG~l~k~ 181 (333)
T PRK09814 136 DRLVE-----EGLT---------------TDKIIVQGIFDYLNDIE--------------LVKTPSFQKKINFAGNLEKS 181 (333)
T ss_pred HHHHH-----cCCC---------------cCceEeccccccccccc--------------ccccccCCceEEEecChhhc
Confidence 55543 1221 11222333332221100 00112345689999999943
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHH
Q 003042 339 KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVP 418 (854)
Q Consensus 339 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~a 418 (854)
.++ .+..|++ .|+++|.. ++.. . ..+.+.+.|.++.+|+..
T Consensus 182 ~~l----------~~~~~~~----~l~i~G~g-----~~~~-------~-------------~~~~V~f~G~~~~eel~~ 222 (333)
T PRK09814 182 PFL----------KNWSQGI----KLTVFGPN-----PEDL-------E-------------NSANISYKGWFDPEELPN 222 (333)
T ss_pred hHH----------HhcCCCC----eEEEECCC-----cccc-------c-------------cCCCeEEecCCCHHHHHH
Confidence 321 1124443 47777632 2111 0 012345667899999999
Q ss_pred HHHhCcEEEEccCc-----------cCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---C
Q 003042 419 YYAIAECCVVNCVR-----------DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---G 484 (854)
Q Consensus 419 ly~~ADv~vv~S~~-----------EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ 484 (854)
+|+. |+.+++.-. -.++--..||||| |.|+|++..++..+.+. .
T Consensus 223 ~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~---------------------G~PVI~~~~~~~~~~V~~~~~ 280 (333)
T PRK09814 223 ELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAA---------------------GLPVIVWSKAAIADFIVENGL 280 (333)
T ss_pred HHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHC---------------------CCCEEECCCccHHHHHHhCCc
Confidence 9988 665553311 1233336678999 45999999988888882 3
Q ss_pred ceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHH
Q 003042 485 AIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKS 533 (854)
Q Consensus 485 ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~ 533 (854)
|+.++ +.++++++|... ++++++.+.+..++...........++
T Consensus 281 G~~v~--~~~el~~~l~~~---~~~~~~~m~~n~~~~~~~~~~g~~~~~ 324 (333)
T PRK09814 281 GFVVD--SLEELPEIIDNI---TEEEYQEMVENVKKISKLLRNGYFTKK 324 (333)
T ss_pred eEEeC--CHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 78887 678999999873 445555555554444433333333333
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.4e-08 Score=94.56 Aligned_cols=54 Identities=17% Similarity=0.317 Sum_probs=44.9
Q ss_pred EEEEecCCCCCCCCC-----CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 587 LILLDYDGTVMPQTS-----EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 587 lI~~DlDGTLl~~~~-----~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
+++||+||||++..+ ....+.+.+.+.|++| ++.|+.++|+||+....+..+++
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~ivS~~~~~~~~~~~~ 59 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKEL-KEKGIKLALATNKSRREVLELLE 59 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHH-HHCCCeEEEEeCchHHHHHHHHH
Confidence 489999999999321 1127889999999999 77899999999999888888874
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.4e-08 Score=106.79 Aligned_cols=66 Identities=15% Similarity=0.139 Sum_probs=56.8
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC--C-----cccceEeCCHh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK--P-----SMAKYYLDDTA 824 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~--~-----s~A~y~l~~~~ 824 (854)
+...+..+++++ |++++++++|||+.+|+.+.+.+|.. +++|.+|.. + ..|+|+++++.
T Consensus 153 ~p~~~~~~~~~l---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~i~~~~ 218 (229)
T PRK13226 153 HPLPLLVAAERI---GVAPTDCVYVGDDERDILAARAAGMP-----------SVAALWGYRLHDDDPLAWQADVLVEQPQ 218 (229)
T ss_pred CHHHHHHHHHHh---CCChhhEEEeCCCHHHHHHHHHCCCc-----------EEEEeecCCCCCcChhhcCCCeeeCCHH
Confidence 678899999999 99999999999999999999999983 578888853 1 35899999999
Q ss_pred HHHHHHH
Q 003042 825 EVINLLE 831 (854)
Q Consensus 825 eV~~~L~ 831 (854)
++.+.|.
T Consensus 219 el~~~~~ 225 (229)
T PRK13226 219 LLWNPAT 225 (229)
T ss_pred HHHHHhc
Confidence 9987764
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=4e-07 Score=96.66 Aligned_cols=59 Identities=12% Similarity=0.215 Sum_probs=50.7
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccce
Q 003042 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGL 648 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~l 648 (854)
+|+|+||+||||+. .. .+.+.+.++|++| ++.|.+++++|+|+......+...+..+|+
T Consensus 1 ~~~v~~DlDGtL~~---~~-~~~p~a~~~l~~L-~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 1 IKNVICDIDGVLMH---DN-VAVPGAAEFLHRI-LDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CcEEEEeCCCceEe---CC-eeCccHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 57999999999998 44 6788999999999 899999999999999888887766555555
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=4.7e-08 Score=105.25 Aligned_cols=71 Identities=20% Similarity=0.356 Sum_probs=61.1
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------CcccceEeCCHh
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------PSMAKYYLDDTA 824 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------~s~A~y~l~~~~ 824 (854)
.|..++..+++++ +++++++++|||+.+|+.+.+.+|.. +++|.+|.. ...|+|++++..
T Consensus 196 ~k~~~~~~~l~~~---~~~p~~~l~IGDs~~Di~aA~~AG~~-----------~I~v~~g~~~~~~l~~~~ad~~i~~~~ 261 (273)
T PRK13225 196 SKRRALSQLVARE---GWQPAAVMYVGDETRDVEAARQVGLI-----------AVAVTWGFNDRQSLVAACPDWLLETPS 261 (273)
T ss_pred CCHHHHHHHHHHh---CcChhHEEEECCCHHHHHHHHHCCCe-----------EEEEecCCCCHHHHHHCCCCEEECCHH
Confidence 4778899999998 99999999999999999999999973 578888853 246999999999
Q ss_pred HHHHHHHHHHh
Q 003042 825 EVINLLEGLAT 835 (854)
Q Consensus 825 eV~~~L~~l~~ 835 (854)
++..++..|..
T Consensus 262 eL~~~~~~~~~ 272 (273)
T PRK13225 262 DLLQAVTQLMR 272 (273)
T ss_pred HHHHHHHHHhc
Confidence 99999887753
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=98.68 E-value=8.2e-07 Score=103.83 Aligned_cols=255 Identities=13% Similarity=0.111 Sum_probs=162.9
Q ss_pred HHHHHHHHHHHHHHh----cCCCCCeEE--EeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCC--hHHHHHH
Q 003042 172 YLSANKVFADKVMEV----INPDEDYVW--IHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPV--RDEILKS 243 (854)
Q Consensus 172 Y~~vN~~fa~~i~~~----~~~~~D~vw--ihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~--r~eil~~ 243 (854)
|...+..++..+-+. .. ++|++. ++.-|... +....|..++.+..|+ ... |. -+..+..
T Consensus 203 f~~~~eLi~efl~~l~~~~~~-~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~---~~~-----~~~~y~~~l~~ 269 (519)
T TIGR03713 203 YSNMDELIREKFQRYLKVEVK-DDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS---ERN-----RHHTYLDLYES 269 (519)
T ss_pred ECCHHHHHHHHHHHHHHhhCC-CCCEEEEEcCchhhhh----HhhcCccceEEEEecc---Ccc-----cccchhhhhhC
Confidence 444445444443332 34 358877 78777766 4444454445556665 111 22 2456666
Q ss_pred hhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc
Q 003042 244 LLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF 323 (854)
Q Consensus 244 ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~ 323 (854)
+-.+|.+-.-|.+-.+........ .. ...+|..+|++.-...+ ...++.
T Consensus 270 ~~~~d~iIv~T~~q~~~l~~~~~~----------------~~-~~~~v~~Ip~~~~~~~~--------------~~s~r~ 318 (519)
T TIGR03713 270 LSRADLIIVDREDIERLLEENYRE----------------NY-VEFDISRITPFDTRLRL--------------GQSQQL 318 (519)
T ss_pred hhhcCeEEEcCHHHHHHHHHHhhh----------------cc-cCCcceeeCccceEEec--------------Chhhcc
Confidence 777787766665433332211100 00 11234445655431110 012233
Q ss_pred CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCC---
Q 003042 324 DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG--- 400 (854)
Q Consensus 324 ~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~--- 400 (854)
.++.|.+++||+ +.|-+...|+|+.++++++|+.. |.+.|.. .. .++.+.+++++.++|..++...
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~---~~---~~~~~~l~~~i~~~~~~~~~~~~~~ 387 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYN---ND---NDITQLLEDILEQINEEYNQDKNFF 387 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEec---Cc---hhHHHHHHHHHHHHHhhhchhhhcc
Confidence 466777888899 99999999999999999999876 6666632 11 2345666677777776642210
Q ss_pred ---------C----------ccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCC
Q 003042 401 ---------Y----------EPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEK 461 (854)
Q Consensus 401 ---------~----------~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~ 461 (854)
- ...+.|.+..+..++...|..|.++|.+|..|||+ +.+||++.
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~---------------- 450 (519)
T TIGR03713 388 SLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISA---------------- 450 (519)
T ss_pred ccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHc----------------
Confidence 0 03667777777779999999999999999999999 99999997
Q ss_pred CCCCCCceEEEecCccccccC---CCceEeCCCCHHHHHHHHHHHhcCCH
Q 003042 462 NPPQKKSVIIVSEFIGCSPSL---SGAIRVNPWNVDAVADAMDSALQMEN 508 (854)
Q Consensus 462 ~~~~~~g~lV~Se~~G~~~~l---~~ai~vnP~d~~~~A~ai~~aL~m~~ 508 (854)
|-|.| .-|.++.+ .+|.+| .|+.++++||...|+.+.
T Consensus 451 -----GiPqI---nyg~~~~V~d~~NG~li--~d~~~l~~al~~~L~~~~ 490 (519)
T TIGR03713 451 -----GIPQI---NKVETDYVEHNKNGYII--DDISELLKALDYYLDNLK 490 (519)
T ss_pred -----CCCee---ecCCceeeEcCCCcEEe--CCHHHHHHHHHHHHhCHH
Confidence 23555 66667777 358999 799999999999998764
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.4e-08 Score=94.50 Aligned_cols=71 Identities=18% Similarity=0.255 Sum_probs=53.7
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC--CcccceEeC---CHhH
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK--PSMAKYYLD---DTAE 825 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~--~s~A~y~l~---~~~e 825 (854)
+|-.+.+.|++++ ++.++++.++||+.||+++|+.+|.+ |+++-+.. +..|+|++. ..-.
T Consensus 83 dK~~a~~~L~~~~---~l~~e~~ayiGDD~~Dlpvm~~vGls------------~a~~dAh~~v~~~a~~Vt~~~GG~GA 147 (170)
T COG1778 83 DKLAAFEELLKKL---NLDPEEVAYVGDDLVDLPVMEKVGLS------------VAVADAHPLLKQRADYVTSKKGGEGA 147 (170)
T ss_pred hHHHHHHHHHHHh---CCCHHHhhhhcCccccHHHHHHcCCc------------ccccccCHHHHHhhHhhhhccCcchH
Confidence 3888999999999 99999999999999999999999975 45544432 577889875 2344
Q ss_pred HHHHHHHHHhc
Q 003042 826 VINLLEGLATE 836 (854)
Q Consensus 826 V~~~L~~l~~~ 836 (854)
|.++++-+...
T Consensus 148 vREv~dlil~a 158 (170)
T COG1778 148 VREVCDLILQA 158 (170)
T ss_pred HHHHHHHHHHc
Confidence 55555544443
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=3.1e-08 Score=106.81 Aligned_cols=71 Identities=20% Similarity=0.226 Sum_probs=58.8
Q ss_pred eCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------CcccceEe
Q 003042 747 PQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------PSMAKYYL 820 (854)
Q Consensus 747 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------~s~A~y~l 820 (854)
+.+..|...++.+++.+ |++++++++|||+.+|+.+.+.+|.. +++|.+|.. ...|++++
T Consensus 154 ~~~Kp~p~~~~~~~~~~---g~~~~~~l~IGD~~~Di~aA~~aGi~-----------~i~v~~G~~~~~~l~~~~~~~vi 219 (272)
T PRK13223 154 PQKKPDPAALLFVMKMA---GVPPSQSLFVGDSRSDVLAAKAAGVQ-----------CVALSYGYNHGRPIAEESPALVI 219 (272)
T ss_pred CCCCCCcHHHHHHHHHh---CCChhHEEEECCCHHHHHHHHHCCCe-----------EEEEecCCCCchhhhhcCCCEEE
Confidence 33445778999999999 99999999999999999999999973 578888742 24789999
Q ss_pred CCHhHHHHHHH
Q 003042 821 DDTAEVINLLE 831 (854)
Q Consensus 821 ~~~~eV~~~L~ 831 (854)
+++.++.+++.
T Consensus 220 ~~l~el~~~~~ 230 (272)
T PRK13223 220 DDLRALLPGCA 230 (272)
T ss_pred CCHHHHHHHHh
Confidence 99999887655
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=3.6e-08 Score=103.05 Aligned_cols=67 Identities=22% Similarity=0.248 Sum_probs=57.1
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------CcccceEeCCHhH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------PSMAKYYLDDTAE 825 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------~s~A~y~l~~~~e 825 (854)
|+.+++.+++++ +++++++++|||+.+|+++.+.+|.. ++.|.+|.. ...++|++++..+
T Consensus 151 ~~~~~~~~~~~~---~~~~~~~i~igD~~~Di~~a~~~g~~-----------~i~v~~g~~~~~~~~~~~~~~~i~~~~~ 216 (226)
T PRK13222 151 DPAPLLLACEKL---GLDPEEMLFVGDSRNDIQAARAAGCP-----------SVGVTYGYNYGEPIALSEPDVVIDHFAE 216 (226)
T ss_pred ChHHHHHHHHHc---CCChhheEEECCCHHHHHHHHHCCCc-----------EEEECcCCCCccchhhcCCCEEECCHHH
Confidence 678999999999 99999999999999999999999973 467777743 2468899999999
Q ss_pred HHHHHHH
Q 003042 826 VINLLEG 832 (854)
Q Consensus 826 V~~~L~~ 832 (854)
+..+|..
T Consensus 217 l~~~l~~ 223 (226)
T PRK13222 217 LLPLLGL 223 (226)
T ss_pred HHHHHHH
Confidence 9888754
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=98.58 E-value=7e-07 Score=96.77 Aligned_cols=59 Identities=17% Similarity=0.322 Sum_probs=45.7
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccce
Q 003042 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGL 648 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~l 648 (854)
+|+|+||+||||++ ... +.+.+.++|++| +++|..++++|||+......++..+..+|+
T Consensus 2 ~~~~~~D~DGtl~~---~~~-~~~ga~e~l~~L-~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~ 60 (279)
T TIGR01452 2 AQGFIFDCDGVLWL---GER-VVPGAPELLDRL-ARAGKAALFVTNNSTKSRAEYALKFARLGF 60 (279)
T ss_pred ccEEEEeCCCceEc---CCe-eCcCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 68999999999998 444 445589999999 889999999999987666555543344444
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=98.53 E-value=7.5e-06 Score=94.11 Aligned_cols=353 Identities=18% Similarity=0.239 Sum_probs=161.6
Q ss_pred cccccccccccCCCCCCCCCccChhcHH--HHHHHHHHHHHHHHHhcCCCCC--eEEEeCcccchHHHHHHhccCCCeEE
Q 003042 143 KHYLWPLFHYMLPLTASHGARFDRGEWQ--AYLSANKVFADKVMEVINPDED--YVWIHDYHLMVLPSFLRKRFHRVKVG 218 (854)
Q Consensus 143 ~~~lwp~~H~~~~~~~~~~~~~~~~~w~--~Y~~vN~~fa~~i~~~~~~~~D--~vwihDyhl~llp~~lr~~~~~~~i~ 218 (854)
+.-||-.|+--.+ ..+.+..+ .+--+-..|-+...+.... .. +.+.|.+..-+-..+||++.|++.-.
T Consensus 100 k~~lW~~~gIdS~-------~~~~dynea~~Fgyava~fi~~f~~~~~~-~~~ViaHfHEWmaG~gll~lr~~~~~VaTv 171 (633)
T PF05693_consen 100 KGELWELFGIDSP-------HGDGDYNEAVMFGYAVAWFIEEFYKFYEE-KPKVIAHFHEWMAGVGLLYLRKRKPDVATV 171 (633)
T ss_dssp HHHHHHHH------------TT-HHHHHHHHHHHHHHHHHHHHHHH-S--SEEEEEEEESGGGTTHHHHHHHTT-SCEEE
T ss_pred HHHHHHHcCCCCC-------CCCcchhHHHHHHHHHHHHHHHHHHhhcC-CCcEEEEechHhHhHHHHHHhccCCCeeEE
Confidence 3557888875432 12222221 1222334555555555442 23 34556665555566789999999999
Q ss_pred EEecCCCC-------ChhhhhcCCC--hHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceee---EEECC
Q 003042 219 FFLHSPFP-------SSEIYRTLPV--RDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIG---LDYFG 286 (854)
Q Consensus 219 ~flH~pfP-------~~e~~~~lp~--r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~---i~~~g 286 (854)
|+.|.--+ ..++|..|+. .++...- -.-+.+|.++.+.....--.+.-..+.+ -..-+
T Consensus 172 FTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~----------~~i~~k~~iEraaA~~AdvFTTVSeITa~Ea~~LL~ 241 (633)
T PF05693_consen 172 FTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGE----------RNIYHKHSIERAAAHYADVFTTVSEITAKEAEHLLK 241 (633)
T ss_dssp EEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHH----------TT-HHHHHHHHHHHHHSSEEEESSHHHHHHHHHHHS
T ss_pred EEecccchhhHhhcCCCcHHHHhhccCccccccC----------ccchHHHHHHHHHHHhcCeeeehhhhHHHHHHHHhC
Confidence 99996543 3344544441 1111110 0012334433321111000000000000 00112
Q ss_pred eEEEEEEeccccCchHHHhhhC----CchHHHHHHHH-HHHc-------CCCE-EEEEecCccc-cCCHHHHHHHHHHHH
Q 003042 287 RTVSIKILPVGIHMGQFESIMS----LDVTGQKVKEL-KEKF-------DGKI-VILGVDDMDL-FKGISLKFLAMGQLL 352 (854)
Q Consensus 287 r~~~i~v~p~GId~~~~~~~~~----~~~~~~~~~~l-~~~~-------~~~~-iil~VdRld~-~KGi~~~l~A~~~ll 352 (854)
|..- .|.|+|+|.+.|...-. .....+++.++ +..+ .++. +|.-.||.++ .||++..|.|+.+|-
T Consensus 242 r~pD-vV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn 320 (633)
T PF05693_consen 242 RKPD-VVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLN 320 (633)
T ss_dssp S--S-EE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHH
T ss_pred CCCC-EEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHH
Confidence 2221 25699999887643210 01123334443 3333 1344 4556899995 899999999998874
Q ss_pred H---hCCCCCCcEEEEEEecCCCCChh---------HHHHHHHHHHHHHHHHhhcc------CC----------------
Q 003042 353 E---QHPDLRGKVVLVQITNPARSSGK---------DVQDLLSDTNRIAEEINLNF------GK---------------- 398 (854)
Q Consensus 353 ~---~~p~~~~~vvLvqi~~p~r~~~~---------~~~~l~~~v~~~v~~In~~~------~~---------------- 398 (854)
. .... +.-|+..|-.|+....- -+.++++.+.++.++|..+- |.
T Consensus 321 ~~lk~~~~--~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~l 398 (633)
T PF05693_consen 321 HRLKQAGS--DKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRL 398 (633)
T ss_dssp HHHHHTT---S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHH
T ss_pred HHHhhcCC--CCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHH
Confidence 3 2221 23333334445433221 11233333333333332110 10
Q ss_pred -----------------------------------------CCCccEEEEcCCCCh------hhHHHHHHhCcEEEEccC
Q 003042 399 -----------------------------------------PGYEPIVIIKEPLST------QDKVPYYAIAECCVVNCV 431 (854)
Q Consensus 399 -----------------------------------------~~~~pv~~~~~~~~~------~el~aly~~ADv~vv~S~ 431 (854)
.+-..|+|....++. -++..+.+.+|++|+||.
T Consensus 399 kr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSY 478 (633)
T PF05693_consen 399 KRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSY 478 (633)
T ss_dssp HHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--S
T ss_pred HHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeeccc
Confidence 012245555443332 367889999999999999
Q ss_pred ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC--------CCceE-eCCC--C----HHHH
Q 003042 432 RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL--------SGAIR-VNPW--N----VDAV 496 (854)
Q Consensus 432 ~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--------~~ai~-vnP~--d----~~~~ 496 (854)
+|.+|.+|+|++|. +-|-|.|+.+|....+ ..|+. |+-. + ++++
T Consensus 479 YEPWGYTPlE~~a~---------------------gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~l 537 (633)
T PF05693_consen 479 YEPWGYTPLECTAF---------------------GVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQL 537 (633)
T ss_dssp SBSS-HHHHHHHHT---------------------T--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHH
T ss_pred cccccCChHHHhhc---------------------CCceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHH
Confidence 99999999999998 4599999999976444 12544 3332 2 3566
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHH
Q 003042 497 ADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQD 537 (854)
Q Consensus 497 A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 537 (854)
|+.|.....++..+|....++..+.-..-+|.+...-+.+.
T Consensus 538 a~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~A 578 (633)
T PF05693_consen 538 ADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKA 578 (633)
T ss_dssp HHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 67777777888877766555555444445666555444443
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=98.53 E-value=4.4e-06 Score=100.90 Aligned_cols=182 Identities=8% Similarity=0.038 Sum_probs=123.2
Q ss_pred EEEEEecCccccCCHHHHHHHHHHHHH--hCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccE
Q 003042 327 IVILGVDDMDLFKGISLKFLAMGQLLE--QHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (854)
Q Consensus 327 ~iil~VdRld~~KGi~~~l~A~~~ll~--~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv 404 (854)
.+|.++.|+...||..+++..+++|.+ .+|+ ..+++|..|...-.+.. -+++.+++.+++.+ -++.. .|
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~~-gK~iIk~i~~~a~~--p~~~~----kV 549 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADEP-GKELIQEIVEFSRR--PEFRG----RI 549 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccchH-HHHHHHHHHHHHhC--cCCCC----cE
Confidence 378999999999999999999999865 3444 24778877754322211 13444455444431 12211 36
Q ss_pred EEEcCCCChhhHHHHHHhCcEEEEccC--ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC
Q 003042 405 VIIKEPLSTQDKVPYYAIAECCVVNCV--RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL 482 (854)
Q Consensus 405 ~~~~~~~~~~el~aly~~ADv~vv~S~--~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 482 (854)
+|+.+ .+..--..+++.||+++.||. .|.-|+.-+-||. .|.|-+|..-|...+-
T Consensus 550 vfle~-Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~----------------------NG~LnlSvlDGww~E~ 606 (778)
T cd04299 550 VFLED-YDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAAL----------------------NGGLNLSVLDGWWDEG 606 (778)
T ss_pred EEEcC-CCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHH----------------------cCCeeeecccCccccc
Confidence 66665 455555588999999999999 7888887666666 3788899988887666
Q ss_pred -C--CceEeCC------------CCHHHHHHHHHHHhc----------CCHHHHHHHHHHHhccccccChHHHHHHHHHH
Q 003042 483 -S--GAIRVNP------------WNVDAVADAMDSALQ----------MENQEKILRHEKHYKYISSHDVAYWAKSIDQD 537 (854)
Q Consensus 483 -~--~ai~vnP------------~d~~~~A~ai~~aL~----------m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 537 (854)
. +|..+.+ .|.+++-+.|.+.+. .|..=.+.+.+.+....-.+++.+.++++++.
T Consensus 607 ~~g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~ 686 (778)
T cd04299 607 YDGENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVER 686 (778)
T ss_pred cCCCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHH
Confidence 2 3788877 556666677765443 13333444555555556678999999999888
Q ss_pred HHH
Q 003042 538 LER 540 (854)
Q Consensus 538 l~~ 540 (854)
+..
T Consensus 687 ~Y~ 689 (778)
T cd04299 687 FYL 689 (778)
T ss_pred hHH
Confidence 763
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.5e-06 Score=92.63 Aligned_cols=53 Identities=21% Similarity=0.362 Sum_probs=44.2
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcC---CCccchhhhhcC
Q 003042 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG---RGKDSLGNWFSG 642 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TG---R~~~~l~~~~~~ 642 (854)
+|.|+||+||||++ .+..++ .+.++|++| ++.|.+++++|| |+...+...+..
T Consensus 1 ~~~~~~D~DGtl~~---~~~~i~-~a~~~l~~l-~~~g~~~~~~Tnn~~r~~~~~~~~l~~ 56 (249)
T TIGR01457 1 YKGYLIDLDGTMYK---GKERIP-EAETFVHEL-QKRDIPYLFVTNNSTRTPESVAEMLAS 56 (249)
T ss_pred CCEEEEeCCCceEc---CCeeCc-CHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 37899999999999 555555 789999999 899999999996 778777776643
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.1e-06 Score=96.80 Aligned_cols=60 Identities=22% Similarity=0.313 Sum_probs=49.2
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccce
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGL 648 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~l 648 (854)
++|+|+||+||||+. .+ .+-+.+.++|++| ++.|.+++++|+|+......++..+..+|+
T Consensus 27 ~~~~~~~D~DGtl~~---~~-~~~~ga~e~l~~l-r~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 27 SVETFIFDCDGVIWK---GD-KLIEGVPETLDML-RSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred hCCEEEEeCcCCeEe---CC-ccCcCHHHHHHHH-HHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 468999999999998 55 4557889999999 899999999999998777776655445554
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.43 E-value=9.8e-08 Score=98.84 Aligned_cols=64 Identities=17% Similarity=0.157 Sum_probs=54.4
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------CcccceEeCCHhH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------PSMAKYYLDDTAE 825 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------~s~A~y~l~~~~e 825 (854)
+...+..+++.+ |++++++++|||+.+|+.+.+.+|.. +++|.+|.. ...|+|++++..+
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~~~igDs~~d~~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~a~~~i~~~~~ 208 (213)
T TIGR01449 143 HPDPLLLAAERL---GVAPQQMVYVGDSRVDIQAARAAGCP-----------SVLLTYGYRYGEAIDLLPPDVLYDSLNE 208 (213)
T ss_pred ChHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHCCCe-----------EEEEccCCCCCcchhhcCCCeEeCCHHH
Confidence 678899999999 99999999999999999999999983 567777743 2468899999998
Q ss_pred HHHH
Q 003042 826 VINL 829 (854)
Q Consensus 826 V~~~ 829 (854)
+..+
T Consensus 209 l~~~ 212 (213)
T TIGR01449 209 LPPL 212 (213)
T ss_pred HHhh
Confidence 7764
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.43 E-value=8.5e-07 Score=92.36 Aligned_cols=62 Identities=21% Similarity=0.354 Sum_probs=49.7
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC---CcccceEeCC--HhH
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK---PSMAKYYLDD--TAE 825 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~---~s~A~y~l~~--~~e 825 (854)
.|+..++.+++++ +++++++++|||+.+|+++++.+|. ++.++.. +..|+|++.+ ..+
T Consensus 152 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~Di~aa~~ag~--------------~i~~~~~~~~~~~a~~~i~~~~~~~ 214 (219)
T TIGR00338 152 YKGKTLLILLRKE---GISPENTVAVGDGANDLSMIKAAGL--------------GIAFNAKPKLQQKADICINKKDLTD 214 (219)
T ss_pred ccHHHHHHHHHHc---CCCHHHEEEEECCHHHHHHHHhCCC--------------eEEeCCCHHHHHhchhccCCCCHHH
Confidence 4899999999998 9999999999999999999999986 3445443 3678998874 456
Q ss_pred HHHH
Q 003042 826 VINL 829 (854)
Q Consensus 826 V~~~ 829 (854)
++.+
T Consensus 215 ~~~~ 218 (219)
T TIGR00338 215 ILPL 218 (219)
T ss_pred HHhh
Confidence 5554
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.42 E-value=8.3e-07 Score=91.83 Aligned_cols=42 Identities=21% Similarity=0.355 Sum_probs=38.4
Q ss_pred CCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 748 QGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 748 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
.+-.|..+++.+++.+ |+++++++++|||.||.+||+.+|..
T Consensus 141 ~~~~K~~~l~~~~~~~---g~~~~~~~a~gDs~nDlpml~~ag~~ 182 (212)
T COG0560 141 DGEGKAKALRELAAEL---GIPLEETVAYGDSANDLPMLEAAGLP 182 (212)
T ss_pred CcchHHHHHHHHHHHc---CCCHHHeEEEcCchhhHHHHHhCCCC
Confidence 3556999999999998 99999999999999999999999973
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.1e-06 Score=92.37 Aligned_cols=72 Identities=8% Similarity=0.038 Sum_probs=59.4
Q ss_pred hHHHHHHHHHHHhhCCCC-CCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------------------
Q 003042 752 KGIVVKNLISTMRSRGKS-PDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------------------ 812 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~-~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------------------ 812 (854)
+...+..+++++ |+. ++++++|||+.+|+.+.+.+|.. +++|.+|..
T Consensus 160 ~p~~~~~a~~~l---~~~~~~e~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~~~~ 225 (267)
T PRK13478 160 YPWMALKNAIEL---GVYDVAACVKVDDTVPGIEEGLNAGMW-----------TVGVILSGNELGLSEEEYQALSAAELA 225 (267)
T ss_pred ChHHHHHHHHHc---CCCCCcceEEEcCcHHHHHHHHHCCCE-----------EEEEccCcccccCCHHHHHhcCHHHHH
Confidence 677888999998 885 69999999999999999999973 578888753
Q ss_pred -----------CcccceEeCCHhHHHHHHHHHHhcc
Q 003042 813 -----------PSMAKYYLDDTAEVINLLEGLATES 837 (854)
Q Consensus 813 -----------~s~A~y~l~~~~eV~~~L~~l~~~~ 837 (854)
...|++++++..++..+|+.+....
T Consensus 226 ~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~~~~ 261 (267)
T PRK13478 226 ARRERARARLRAAGAHYVIDTIADLPAVIADIEARL 261 (267)
T ss_pred HHHHHHHHHHHHcCCCeehhhHHHHHHHHHHHHHHH
Confidence 2468899999999998887665433
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.37 E-value=8.3e-07 Score=89.07 Aligned_cols=65 Identities=12% Similarity=0.153 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------------CcccceE
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------------PSMAKYY 819 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------------~s~A~y~ 819 (854)
+......+++.+ |.+++++++|||+.+|+.+.+.+|.. ++.|.+|.. ...++|+
T Consensus 95 ~p~~~~~~~~~l---~~~p~~~i~IGD~~~Di~aA~~aGi~-----------~i~v~~g~~~~~~~~~~~~l~~~~~~~~ 160 (173)
T PRK06769 95 STGMLLQAAEKH---GLDLTQCAVIGDRWTDIVAAAKVNAT-----------TILVRTGAGYDALHTYRDKWAHIEPNYI 160 (173)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCCe-----------EEEEecCCCchhhhhhhcccccCCCcch
Confidence 566788888888 99999999999999999999999983 578888752 1357788
Q ss_pred eCCHhHHHHHH
Q 003042 820 LDDTAEVINLL 830 (854)
Q Consensus 820 l~~~~eV~~~L 830 (854)
++++.++..+|
T Consensus 161 ~~~~~el~~~l 171 (173)
T PRK06769 161 AENFEDAVNWI 171 (173)
T ss_pred hhCHHHHHHHH
Confidence 88999988765
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.36 E-value=6.2e-07 Score=95.46 Aligned_cols=77 Identities=14% Similarity=0.091 Sum_probs=59.3
Q ss_pred CCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEec
Q 003042 731 NEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVG 810 (854)
Q Consensus 731 ~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG 810 (854)
+++..++.+...-.-+| +...+..+++++ |++++++++|||+.+|+.+.+.+|.. +++|.+|
T Consensus 149 ~~Fd~iv~~~~~~~~KP----~p~~~~~a~~~~---~~~~~~~l~vgDs~~Di~aA~~aGi~-----------~i~v~~g 210 (248)
T PLN02770 149 DFFQAVIIGSECEHAKP----HPDPYLKALEVL---KVSKDHTFVFEDSVSGIKAGVAAGMP-----------VVGLTTR 210 (248)
T ss_pred hhCcEEEecCcCCCCCC----ChHHHHHHHHHh---CCChhHEEEEcCCHHHHHHHHHCCCE-----------EEEEeCC
Confidence 33444555544333344 778899999999 99999999999999999999999973 5788877
Q ss_pred CC-----CcccceEeCCHhH
Q 003042 811 QK-----PSMAKYYLDDTAE 825 (854)
Q Consensus 811 ~~-----~s~A~y~l~~~~e 825 (854)
.. ...|++++++..+
T Consensus 211 ~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 211 NPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred CCHHHHhhcCCCEEeccchh
Confidence 53 3478899999888
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.2e-06 Score=91.39 Aligned_cols=61 Identities=10% Similarity=-0.024 Sum_probs=49.5
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC---CcccceEeCCHhHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK---PSMAKYYLDDTAEV 826 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~---~s~A~y~l~~~~eV 826 (854)
+......+++.+ |++|+++++|||+.+|+.+.+.+|.. +++|..|.. ...|++++++..++
T Consensus 140 ~p~~~~~~~~~~---g~~p~~~l~igDs~~di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 140 EPDAYLLGAQLL---GLAPQECVVVEDAPAGVLSGLAAGCH-----------VIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred CcHHHHHHHHHc---CCCcccEEEEecchhhhHHHHHCCCE-----------EEEECCCCchhhhccCCEEecchhhe
Confidence 677888888988 99999999999999999999999873 456665542 24678888887775
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=98.33 E-value=5.8e-07 Score=93.66 Aligned_cols=65 Identities=17% Similarity=0.139 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHHhhCCCC-CCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccE-EEEEecCC------CcccceEeCCH
Q 003042 752 KGIVVKNLISTMRSRGKS-PDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEV-FACTVGQK------PSMAKYYLDDT 823 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~-~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~-~aV~vG~~------~s~A~y~l~~~ 823 (854)
+...+..+++++ |+. ++++++|||+.+|+.+.+.+|.. + ++|..|.. ...|++++++.
T Consensus 147 ~p~~~~~a~~~~---~~~~~~~~~~igD~~~Di~aa~~aG~~-----------~~i~~~~g~~~~~~~~~~~~~~~i~~~ 212 (220)
T TIGR03351 147 APDLILRAMELT---GVQDVQSVAVAGDTPNDLEAGINAGAG-----------AVVGVLTGAHDAEELSRHPHTHVLDSV 212 (220)
T ss_pred CHHHHHHHHHHc---CCCChhHeEEeCCCHHHHHHHHHCCCC-----------eEEEEecCCCcHHHHhhcCCceeecCH
Confidence 778999999998 887 79999999999999999999984 4 66777742 24688899999
Q ss_pred hHHHHHH
Q 003042 824 AEVINLL 830 (854)
Q Consensus 824 ~eV~~~L 830 (854)
.++..++
T Consensus 213 ~~l~~~~ 219 (220)
T TIGR03351 213 ADLPALL 219 (220)
T ss_pred HHHHHhh
Confidence 8877654
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=98.33 E-value=3e-06 Score=85.66 Aligned_cols=66 Identities=15% Similarity=0.140 Sum_probs=54.2
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC-----Cccc--ceEeCCHh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK-----PSMA--KYYLDDTA 824 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~-----~s~A--~y~l~~~~ 824 (854)
+...+..+++.+ |++++++++|||+.+|+.+.+.+|.. +++|..|.. ...+ ++++++..
T Consensus 105 ~p~~~~~~~~~l---~~~~~~~~~VgDs~~Di~~A~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~ii~~l~ 170 (181)
T PRK08942 105 KPGMLLSIAERL---NIDLAGSPMVGDSLRDLQAAAAAGVT-----------PVLVRTGKGVTTLAEGAAPGTWVLDSLA 170 (181)
T ss_pred CHHHHHHHHHHc---CCChhhEEEEeCCHHHHHHHHHCCCe-----------EEEEcCCCCchhhhcccCCCceeecCHH
Confidence 567888889988 99999999999999999999999973 467777743 2345 88999999
Q ss_pred HHHHHHH
Q 003042 825 EVINLLE 831 (854)
Q Consensus 825 eV~~~L~ 831 (854)
++.++|.
T Consensus 171 el~~~l~ 177 (181)
T PRK08942 171 DLPQALK 177 (181)
T ss_pred HHHHHHH
Confidence 8887765
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.32 E-value=5.8e-07 Score=88.53 Aligned_cols=52 Identities=17% Similarity=0.372 Sum_probs=45.5
Q ss_pred EEEEecCCCCCCCCCCC-----------CCCCHHHHHHHHHcccCCCCeEEEEcCCCccchh---hhhcC
Q 003042 587 LILLDYDGTVMPQTSED-----------KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLG---NWFSG 642 (854)
Q Consensus 587 lI~~DlDGTLl~~~~~~-----------~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~---~~~~~ 642 (854)
+|++|+||||++ ++ ..+++.+.++++++ +++|+.++++|||+..... +++..
T Consensus 1 iVisDIDGTL~~---sd~~~~~~~~~~~~~~~~~~~~a~~~l-~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 1 IVISDIDGTITK---SDVLGHVVPIIGKDWTHPGVAKLYRDI-QNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred CEEEecCCCCcc---cccccccccccccCcCCHHHHHHHHHH-HHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 589999999998 55 67899999999999 8999999999999988774 66644
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=8.6e-07 Score=92.64 Aligned_cols=63 Identities=13% Similarity=0.132 Sum_probs=50.2
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC-----cccceEeCCHhH
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP-----SMAKYYLDDTAE 825 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~-----s~A~y~l~~~~e 825 (854)
.+...++.+++.+ |++++++++|||+.+|+++.+.+|.. ++.|..+... ..|++++.+..+
T Consensus 149 p~~~~~~~~~~~~---~~~~~~~~~igDs~~Di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~~~d 214 (222)
T PRK10826 149 PHPEVYLNCAAKL---GVDPLTCVALEDSFNGMIAAKAARMR-----------SIVVPAPEQQNDPRWALADVKLESLTE 214 (222)
T ss_pred CCHHHHHHHHHHc---CCCHHHeEEEcCChhhHHHHHHcCCE-----------EEEecCCccCchhhhhhhheeccCHHH
Confidence 3677999999999 99999999999999999999999973 3555544321 357888888877
Q ss_pred HH
Q 003042 826 VI 827 (854)
Q Consensus 826 V~ 827 (854)
+.
T Consensus 215 l~ 216 (222)
T PRK10826 215 LT 216 (222)
T ss_pred Hh
Confidence 64
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.29 E-value=5.3e-06 Score=84.88 Aligned_cols=38 Identities=29% Similarity=0.432 Sum_probs=35.7
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+|+.+++.+++.+ |++++++++|||+.+|++|++.+|.
T Consensus 147 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~D~~~a~~ag~ 184 (201)
T TIGR01491 147 NKGEAVERLKREL---NPSLTETVAVGDSKNDLPMFEVADI 184 (201)
T ss_pred cHHHHHHHHHHHh---CCCHHHEEEEcCCHhHHHHHHhcCC
Confidence 5888999999988 9999999999999999999999997
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=98.29 E-value=4.8e-06 Score=88.83 Aligned_cols=65 Identities=14% Similarity=0.113 Sum_probs=54.2
Q ss_pred hHHHHHHHHHHHhhCCCC-CCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------------------
Q 003042 752 KGIVVKNLISTMRSRGKS-PDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------------------ 812 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~-~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------------------ 812 (854)
+......+++++ |+. ++++++|||+.+|+.+.+.+|.. +++|.+|..
T Consensus 158 ~p~~~~~a~~~l---~~~~~~~~l~IGDs~~Di~aA~~aGi~-----------~i~v~~g~~~~~~~~~~~~~~~~~~~~ 223 (253)
T TIGR01422 158 APWMALKNAIEL---GVYDVAACVKVGDTVPDIEEGRNAGMW-----------TVGLILSSNELGLSEEEYRALDPAELE 223 (253)
T ss_pred CHHHHHHHHHHc---CCCCchheEEECCcHHHHHHHHHCCCe-----------EEEEecCCcccCCCHHHHHhCCHHHHH
Confidence 677888889988 885 99999999999999999999973 688888853
Q ss_pred -----------CcccceEeCCHhHHHHHH
Q 003042 813 -----------PSMAKYYLDDTAEVINLL 830 (854)
Q Consensus 813 -----------~s~A~y~l~~~~eV~~~L 830 (854)
...|+++++++.++..+|
T Consensus 224 ~~~~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 224 ARRAEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 245889999999877654
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.1e-06 Score=97.85 Aligned_cols=90 Identities=13% Similarity=0.104 Sum_probs=67.0
Q ss_pred CCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEec
Q 003042 731 NEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVG 810 (854)
Q Consensus 731 ~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG 810 (854)
+++..++.+.....-+| +......+++.+ |+.++++++|||+.+|+.+.+.+|.. +++|..+
T Consensus 257 ~yFd~Iv~sddv~~~KP----~Peifl~A~~~l---gl~Peecl~IGDS~~DIeAAk~AGm~-----------~IgV~~~ 318 (381)
T PLN02575 257 GFFSVIVAAEDVYRGKP----DPEMFIYAAQLL---NFIPERCIVFGNSNQTVEAAHDARMK-----------CVAVASK 318 (381)
T ss_pred HHceEEEecCcCCCCCC----CHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHcCCE-----------EEEECCC
Confidence 44455555554433344 778899999999 99999999999999999999999973 5666655
Q ss_pred CC---CcccceEeCCHhHH-HHHHHHHHhccC
Q 003042 811 QK---PSMAKYYLDDTAEV-INLLEGLATESV 838 (854)
Q Consensus 811 ~~---~s~A~y~l~~~~eV-~~~L~~l~~~~~ 838 (854)
.. ...|++++++.+++ ...|+.|...-.
T Consensus 319 ~~~~~l~~Ad~iI~s~~EL~~~~l~~l~~~~~ 350 (381)
T PLN02575 319 HPIYELGAADLVVRRLDELSIVDLKNLADIES 350 (381)
T ss_pred CChhHhcCCCEEECCHHHHHHHHHhhhhhcCc
Confidence 32 23589999999998 566677776543
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.7e-06 Score=92.52 Aligned_cols=87 Identities=14% Similarity=0.122 Sum_probs=62.5
Q ss_pred CCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEec
Q 003042 731 NEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVG 810 (854)
Q Consensus 731 ~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG 810 (854)
.++..++.+...-.-+| +......+++++ |++++++++|||+.+|+.+.+.+|.. +++|. |
T Consensus 150 ~~Fd~ii~~~d~~~~KP----~Pe~~~~a~~~l---~~~p~~~l~IgDs~~Di~aA~~aG~~-----------~i~v~-g 210 (260)
T PLN03243 150 GFFSVVLAAEDVYRGKP----DPEMFMYAAERL---GFIPERCIVFGNSNSSVEAAHDGCMK-----------CVAVA-G 210 (260)
T ss_pred hhCcEEEecccCCCCCC----CHHHHHHHHHHh---CCChHHeEEEcCCHHHHHHHHHcCCE-----------EEEEe-c
Confidence 33444555543322344 678899999999 99999999999999999999999973 45665 5
Q ss_pred CC----CcccceEeCCHhHHHHHH-HHHHhc
Q 003042 811 QK----PSMAKYYLDDTAEVINLL-EGLATE 836 (854)
Q Consensus 811 ~~----~s~A~y~l~~~~eV~~~L-~~l~~~ 836 (854)
.. -..|++++++..++...+ ..++..
T Consensus 211 ~~~~~~l~~ad~vi~~~~el~~~~~~~~~~~ 241 (260)
T PLN03243 211 KHPVYELSAGDLVVRRLDDLSVVDLKNLSDL 241 (260)
T ss_pred CCchhhhccCCEEeCCHHHHHHHHHhhhhcc
Confidence 32 246899999999876544 444443
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=98.26 E-value=5.2e-05 Score=86.12 Aligned_cols=134 Identities=18% Similarity=0.149 Sum_probs=82.2
Q ss_pred CCEEE--EEecCccc-cCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCC
Q 003042 325 GKIVI--LGVDDMDL-FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGY 401 (854)
Q Consensus 325 ~~~ii--l~VdRld~-~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~ 401 (854)
++++| ++.+|..+ .|++..+++|++.+.+++|+++ ++.++.+. .....+ +++..+ ++. +.
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~~~~~----~~~~~~----~~~-~~ 252 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KRRLQF----EQIKAE----YGP-DL 252 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hhHHHH----HHHHHH----hCC-CC
Confidence 55554 34469888 7999999999999999888765 54433221 111122 222222 111 11
Q ss_pred ccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEec-------
Q 003042 402 EPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSE------- 474 (854)
Q Consensus 402 ~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se------- 474 (854)
.+.++.+ +...+|++||++|.+| |.+.+|+++|+. |.|++-
T Consensus 253 -~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~---------------------P~Vv~yk~~pl~~ 300 (385)
T TIGR00215 253 -QLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIKT---------------------PMVVGYRMKPLTF 300 (385)
T ss_pred -cEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcCC---------------------CEEEEEcCCHHHH
Confidence 2444433 3557999999999999 666779999944 555551
Q ss_pred ----------CccccccCCC-c----eEeCCCCHHHHHHHHHHHhcCC
Q 003042 475 ----------FIGCSPSLSG-A----IRVNPWNVDAVADAMDSALQME 507 (854)
Q Consensus 475 ----------~~G~~~~l~~-a----i~vnP~d~~~~A~ai~~aL~m~ 507 (854)
+.+.+..+.+ + ++-+-.+++.+++++.+.|..+
T Consensus 301 ~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 301 LIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 2222222311 1 2223346789999999999877
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.2e-06 Score=90.40 Aligned_cols=66 Identities=15% Similarity=0.254 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------CcccceEeCCHhH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------PSMAKYYLDDTAE 825 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------~s~A~y~l~~~~e 825 (854)
|...++.+++.+ |++++++++|||+.+|+.+.+.+|.. +++|.+|.. ...|+|+++++.+
T Consensus 133 ~~~~~~~~~~~~---~~~~~~~l~igD~~~Di~aA~~~Gi~-----------~i~~~~g~~~~~~l~~~~~~~~~~~~~~ 198 (205)
T TIGR01454 133 APDIVREALRLL---DVPPEDAVMVGDAVTDLASARAAGTA-----------TVAALWGEGDAGELLAARPDFLLRKPQS 198 (205)
T ss_pred ChHHHHHHHHHc---CCChhheEEEcCCHHHHHHHHHcCCe-----------EEEEEecCCChhhhhhcCCCeeeCCHHH
Confidence 778889999998 99999999999999999999999983 578999853 3568999999999
Q ss_pred HHHHHH
Q 003042 826 VINLLE 831 (854)
Q Consensus 826 V~~~L~ 831 (854)
+..++.
T Consensus 199 l~~~~~ 204 (205)
T TIGR01454 199 LLALCR 204 (205)
T ss_pred HHHHhh
Confidence 887664
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.23 E-value=7.8e-06 Score=82.27 Aligned_cols=63 Identities=13% Similarity=0.102 Sum_probs=52.2
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC-----CcccceEeCCHhHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK-----PSMAKYYLDDTAEV 826 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~-----~s~A~y~l~~~~eV 826 (854)
+...+..+++++ |++++++++|||+.+|+...+.+|.. .++.|.+|.. ...|+++++++.++
T Consensus 108 ~p~~~~~a~~~~---~~~~~~~v~VGDs~~Di~aA~~aG~~----------~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 108 KPGMLLQARKEL---HIDMAQSYMVGDKLEDMQAGVAAKVK----------TNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred CHHHHHHHHHHc---CcChhhEEEEcCCHHHHHHHHHCCCc----------EEEEEecCCcccccccccCCEEeccHHHh
Confidence 677888999998 99999999999999999999999973 1257778853 23589999998887
Q ss_pred H
Q 003042 827 I 827 (854)
Q Consensus 827 ~ 827 (854)
.
T Consensus 175 ~ 175 (176)
T TIGR00213 175 P 175 (176)
T ss_pred h
Confidence 5
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.8e-06 Score=90.29 Aligned_cols=66 Identities=18% Similarity=0.282 Sum_probs=50.2
Q ss_pred CCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------CcccceEeC
Q 003042 748 QGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------PSMAKYYLD 821 (854)
Q Consensus 748 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------~s~A~y~l~ 821 (854)
.+.+|..+++.+++.+ |. +++++|||+.||+.|.++++.. +.+++|.. ...|+|+++
T Consensus 152 ~~~~K~~~i~~~~~~~---~~--~~~i~iGDs~~Di~aa~~~~~~------------~~~~~~~~~~~~~~~~~~~~~i~ 214 (224)
T PLN02954 152 RSGGKAEAVQHIKKKH---GY--KTMVMIGDGATDLEARKPGGAD------------LFIGYGGVQVREAVAAKADWFVT 214 (224)
T ss_pred CCccHHHHHHHHHHHc---CC--CceEEEeCCHHHHHhhhcCCCC------------EEEecCCCccCHHHHhcCCEEEC
Confidence 3456999999998876 54 6899999999999997776542 34556632 235899999
Q ss_pred CHhHHHHHH
Q 003042 822 DTAEVINLL 830 (854)
Q Consensus 822 ~~~eV~~~L 830 (854)
+..++.++|
T Consensus 215 ~~~el~~~~ 223 (224)
T PLN02954 215 DFQDLIEVL 223 (224)
T ss_pred CHHHHHHhh
Confidence 999988765
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.15 E-value=0.00075 Score=74.91 Aligned_cols=300 Identities=17% Similarity=0.261 Sum_probs=171.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEEeCcc----cchHHHH--HHhccCCCeEEEEecCC---------CCChhhhhcCCCh
Q 003042 173 LSANKVFADKVMEVINPDEDYVWIHDYH----LMVLPSF--LRKRFHRVKVGFFLHSP---------FPSSEIYRTLPVR 237 (854)
Q Consensus 173 ~~vN~~fa~~i~~~~~~~~D~vwihDyh----l~llp~~--lr~~~~~~~i~~flH~p---------fP~~e~~~~lp~r 237 (854)
.+.+++|+- ......|++..||+|-=- ..++|-. ||+++|+.++..+.-+| |++.-.-+-+|..
T Consensus 32 ~r~~eRfg~-~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D 110 (419)
T COG1519 32 KRLGERFGF-YKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLD 110 (419)
T ss_pred HHHHHHhcc-cCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcC
Confidence 467788871 223345667899999554 3444544 89999999999888665 2333222334432
Q ss_pred H-HHHHHh---hcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEE---------------------EEE
Q 003042 238 D-EILKSL---LNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTV---------------------SIK 292 (854)
Q Consensus 238 ~-eil~~l---l~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~---------------------~i~ 292 (854)
. -.++.. ...|+.-|---+.=-|++..|.+. |+. .+-.|+|-. ..-
T Consensus 111 ~~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p--------~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li 181 (419)
T COG1519 111 LPIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIP--------LVLVNARLSDRSFARYAKLKFLARLLFKNIDLI 181 (419)
T ss_pred chHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCC--------EEEEeeeechhhhHHHHHHHHHHHHHHHhccee
Confidence 1 122222 234554444444444455544332 111 111122111 111
Q ss_pred EeccccCchHHHhhh---------------CCchHHHHHHHHHHHcCC-CEEEEEecCccccCCHHHHHHHHHHHHHhCC
Q 003042 293 ILPVGIHMGQFESIM---------------SLDVTGQKVKELKEKFDG-KIVILGVDDMDLFKGISLKFLAMGQLLEQHP 356 (854)
Q Consensus 293 v~p~GId~~~~~~~~---------------~~~~~~~~~~~l~~~~~~-~~iil~VdRld~~KGi~~~l~A~~~ll~~~p 356 (854)
+.-.-+|.++|.... ..|........+|.++++ +++++..+..+ .--.-.+.++..+++++|
T Consensus 182 ~aQse~D~~Rf~~LGa~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaSTH~--GEeei~l~~~~~l~~~~~ 259 (419)
T COG1519 182 LAQSEEDAQRFRSLGAKPVVVTGNLKFDIEPPPQLAAELAALRRQLGGHRPVWVAASTHE--GEEEIILDAHQALKKQFP 259 (419)
T ss_pred eecCHHHHHHHHhcCCcceEEecceeecCCCChhhHHHHHHHHHhcCCCCceEEEecCCC--chHHHHHHHHHHHHhhCC
Confidence 222234444443321 123344566778888877 89999988733 223346789999999999
Q ss_pred CCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCC-------CCccEEEEcCCCChhhHHHHHHhCcEEEEc
Q 003042 357 DLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKP-------GYEPIVIIKEPLSTQDKVPYYAIAECCVVN 429 (854)
Q Consensus 357 ~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~-------~~~pv~~~~~~~~~~el~aly~~ADv~vv~ 429 (854)
+.. || +. | +.++ =-..+++++.+.|-+++.- ...+|++... .-|+..+|++||++++-
T Consensus 260 ~~l----lI-lV-P---RHpE---Rf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~Dt---mGEL~l~y~~adiAFVG 324 (419)
T COG1519 260 NLL----LI-LV-P---RHPE---RFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDT---MGELGLLYGIADIAFVG 324 (419)
T ss_pred Cce----EE-Ee-c---CChh---hHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEec---HhHHHHHHhhccEEEEC
Confidence 753 33 32 3 3343 3456777888877666431 1224443332 67999999999998765
Q ss_pred cC---ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEe----cCccccccC---CCceEeCCCCHHHHHHH
Q 003042 430 CV---RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS----EFIGCSPSL---SGAIRVNPWNVDAVADA 499 (854)
Q Consensus 430 S~---~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S----e~~G~~~~l---~~ai~vnP~d~~~~A~a 499 (854)
-. .-|-| ++|+.+| +.|+|.. .|.-+.+.+ .+++.|+. .+.++++
T Consensus 325 GSlv~~GGHN--~LEpa~~---------------------~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~~~l~~~ 379 (419)
T COG1519 325 GSLVPIGGHN--PLEPAAF---------------------GTPVIFGPYTFNFSDIAERLLQAGAGLQVED--ADLLAKA 379 (419)
T ss_pred CcccCCCCCC--hhhHHHc---------------------CCCEEeCCccccHHHHHHHHHhcCCeEEECC--HHHHHHH
Confidence 43 34555 5699998 3466644 344444444 23667764 7788888
Q ss_pred HHHHhcCCHHHHHHHHHHHhcccccc
Q 003042 500 MDSALQMENQEKILRHEKHYKYISSH 525 (854)
Q Consensus 500 i~~aL~m~~~er~~r~~~~~~~v~~~ 525 (854)
+...+.. +.+|+.+.++....+.++
T Consensus 380 v~~l~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 380 VELLLAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred HHHhcCC-HHHHHHHHHHHHHHHHHh
Confidence 8777766 667777767766665443
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.15 E-value=3.9e-06 Score=84.08 Aligned_cols=41 Identities=27% Similarity=0.461 Sum_probs=36.7
Q ss_pred eeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHh
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESI 789 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~a 789 (854)
.+.+.+|+.+++.+++.+ |++++++++|||+.||++|++.+
T Consensus 137 ~~~~~~K~~~l~~~~~~~---~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEES---KITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHh---CCCHHHEEEEeCCHHHHHHHhcC
Confidence 366788999999999887 89999999999999999999864
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.11 E-value=5.5e-06 Score=90.07 Aligned_cols=62 Identities=13% Similarity=0.066 Sum_probs=51.6
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC----cccceEeCCHhHHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP----SMAKYYLDDTAEVI 827 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~----s~A~y~l~~~~eV~ 827 (854)
+...+..+++++ |++++++++|||+.+|+.+.+.+|.. +++|..|... ..|++++++..++.
T Consensus 204 ~p~~~~~a~~~~---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~l~~ad~vi~~~~~l~ 269 (286)
T PLN02779 204 DPDIYNLAAETL---GVDPSRCVVVEDSVIGLQAAKAAGMR-----------CIVTKSSYTADEDFSGADAVFDCLGDVP 269 (286)
T ss_pred CHHHHHHHHHHh---CcChHHEEEEeCCHHhHHHHHHcCCE-----------EEEEccCCccccccCCCcEEECChhhcc
Confidence 567899999999 99999999999999999999999973 5677777431 45899999877754
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=98.06 E-value=9.8e-06 Score=77.31 Aligned_cols=46 Identities=26% Similarity=0.432 Sum_probs=37.4
Q ss_pred eEEEEecCCCCCCCCC-----CCCCCCHHHHHHHHHcccCCCCeEEEEcCCC
Q 003042 586 RLILLDYDGTVMPQTS-----EDKRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (854)
Q Consensus 586 klI~~DlDGTLl~~~~-----~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~ 632 (854)
|+++||+||||++... ....+.+.+.++|+.| ++.|+.++|+|+++
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L-~~~g~~l~i~Sn~~ 51 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAEL-KEAGYKVVIVTNQS 51 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHH-HHCCCEEEEEECCc
Confidence 6899999999996210 1245678899999999 88999999999986
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.5e-05 Score=83.55 Aligned_cols=33 Identities=15% Similarity=0.216 Sum_probs=28.3
Q ss_pred cccccCHHHHHHHHhhcCCeEEEEecCCCCCCC
Q 003042 567 EFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQ 599 (854)
Q Consensus 567 ~f~~l~~~~i~~~y~~~~~klI~~DlDGTLl~~ 599 (854)
.-...++++|.++....+.-.|+||+||||++.
T Consensus 45 ~~~~~~~~~~~~~~~~~~p~aViFDlDgTLlDS 77 (237)
T TIGR01672 45 PIHWISVAQIENSLEGRPPIAVSFDIDDTVLFS 77 (237)
T ss_pred CeeEEEHHHHHHhcCCCCCeEEEEeCCCccccC
Confidence 355688999999998877779999999999983
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=98.03 E-value=6.9e-06 Score=77.29 Aligned_cols=51 Identities=18% Similarity=0.273 Sum_probs=41.7
Q ss_pred eEEEEecCCCCCCCCC---CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchh
Q 003042 586 RLILLDYDGTVMPQTS---EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLG 637 (854)
Q Consensus 586 klI~~DlDGTLl~~~~---~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~ 637 (854)
|+|++|+||||+.... ....+.+.++++|+++ ++.|+.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l-~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHY-KALGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHH-HHCCCEEEEECCCCchhhh
Confidence 7999999999997321 1134779999999999 7899999999999987654
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.5e-05 Score=82.13 Aligned_cols=54 Identities=11% Similarity=0.212 Sum_probs=40.4
Q ss_pred CCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC----cccce-EeCCHhHHHHHHHHHHh
Q 003042 768 KSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP----SMAKY-YLDDTAEVINLLEGLAT 835 (854)
Q Consensus 768 i~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~----s~A~y-~l~~~~eV~~~L~~l~~ 835 (854)
..++++++|||+.||++|.+++|. +|.++... ..+.+ .+++..++..+|.....
T Consensus 142 ~~~~~~v~iGDs~~D~~~~~aa~~--------------~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~ 200 (205)
T PRK13582 142 SLGYRVIAAGDSYNDTTMLGEADA--------------GILFRPPANVIAEFPQFPAVHTYDELLAAIDKASA 200 (205)
T ss_pred HhCCeEEEEeCCHHHHHHHHhCCC--------------CEEECCCHHHHHhCCcccccCCHHHHHHHHHHHHh
Confidence 345899999999999999999985 34455431 24455 78999999888877654
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=97.95 E-value=1e-05 Score=84.31 Aligned_cols=61 Identities=13% Similarity=0.232 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC-------cccceEeCCH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFACTVGQKP-------SMAKYYLDDT 823 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~-------s~A~y~l~~~ 823 (854)
+....+.+++.+ |++++++++|||+. +|+.+.+.+|.. ++.|..|... ..++|++++.
T Consensus 152 ~~~~~~~~~~~~---~~~~~~~~~igDs~~~di~~A~~aG~~-----------~i~~~~~~~~~~~~~~~~~~~~~i~~~ 217 (221)
T TIGR02253 152 HPKIFYAALKRL---GVKPEEAVMVGDRLDKDIKGAKNLGMK-----------TVWINQGKSSKMEDDVYPYPDYEISSL 217 (221)
T ss_pred CHHHHHHHHHHc---CCChhhEEEECCChHHHHHHHHHCCCE-----------EEEECCCCCcccccccccCCCeeeCcH
Confidence 667889999998 99999999999997 999999999973 3555555431 2467788877
Q ss_pred hHH
Q 003042 824 AEV 826 (854)
Q Consensus 824 ~eV 826 (854)
.++
T Consensus 218 ~el 220 (221)
T TIGR02253 218 REL 220 (221)
T ss_pred Hhh
Confidence 664
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=97.94 E-value=4.2e-05 Score=76.17 Aligned_cols=50 Identities=24% Similarity=0.373 Sum_probs=38.4
Q ss_pred hcCCeEEEEecCCCCCCCCCCCCC---------CCHHHHHHHHHcccCCCCeEEEEcCCC
Q 003042 582 KTNSRLILLDYDGTVMPQTSEDKR---------PSTEVLSILNDLCNDPKNAVFIVSGRG 632 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~~~~---------is~~~~~aL~~L~~~~g~~v~I~TGR~ 632 (854)
.|+.|+++||+||||+...+.... +-+.+.++|++| ++.|+.++|+|..+
T Consensus 10 ~~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L-k~~G~~l~I~TN~~ 68 (166)
T TIGR01664 10 KPQSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQEL-DDEGYKIVIFTNQS 68 (166)
T ss_pred CCcCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHH-HHCCCEEEEEeCCc
Confidence 466899999999999973211101 237789999999 88999999999864
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=97.93 E-value=9.5e-06 Score=72.18 Aligned_cols=88 Identities=16% Similarity=0.179 Sum_probs=69.2
Q ss_pred EEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC-C--ceEeCCCCHHHHHHHHH
Q 003042 425 CCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS-G--AIRVNPWNVDAVADAMD 501 (854)
Q Consensus 425 v~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~--ai~vnP~d~~~~A~ai~ 501 (854)
+++.|+..+|+++..+|+||| |+|+|.+...+....+. + ++.++ |++++++++.
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~---------------------G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~ 57 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMAC---------------------GTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIE 57 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHC---------------------CCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHH
Confidence 467788899999999999999 45666666777777773 3 67777 9999999999
Q ss_pred HHhcCCHHHHHHHHHHHhcccc-ccChHHHHHHHHH
Q 003042 502 SALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQ 536 (854)
Q Consensus 502 ~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~ 536 (854)
.+++.|+ +++...++.+++|. .|++.+-+++|++
T Consensus 58 ~ll~~~~-~~~~ia~~a~~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 58 YLLENPE-ERRRIAKNARERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHCCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHC
Confidence 9999665 55555666666665 7999988888763
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.93 E-value=7.7e-05 Score=77.80 Aligned_cols=65 Identities=18% Similarity=0.288 Sum_probs=47.0
Q ss_pred cchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecC------CCcccceEeCCH
Q 003042 750 VSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ------KPSMAKYYLDDT 823 (854)
Q Consensus 750 vsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~------~~s~A~y~l~~~ 823 (854)
..|..+++ ++ +..++++++|||+.||+.|++.+|.. ++ -+. ....+.+.+++.
T Consensus 147 ~~K~~~l~----~~---~~~~~~~i~iGDs~~Di~aa~~Ag~~------------~a--~~~l~~~~~~~~~~~~~~~~f 205 (219)
T PRK09552 147 CCKPSLIR----KL---SDTNDFHIVIGDSITDLEAAKQADKV------------FA--RDFLITKCEELGIPYTPFETF 205 (219)
T ss_pred CchHHHHH----Hh---ccCCCCEEEEeCCHHHHHHHHHCCcc------------ee--HHHHHHHHHHcCCCccccCCH
Confidence 44776554 44 67788999999999999999999862 22 221 234466667899
Q ss_pred hHHHHHHHHHHh
Q 003042 824 AEVINLLEGLAT 835 (854)
Q Consensus 824 ~eV~~~L~~l~~ 835 (854)
.+|...|+.+-+
T Consensus 206 ~ei~~~l~~~~~ 217 (219)
T PRK09552 206 HDVQTELKHLLE 217 (219)
T ss_pred HHHHHHHHHHhc
Confidence 999999887754
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=97.89 E-value=4.9e-05 Score=74.10 Aligned_cols=38 Identities=18% Similarity=0.205 Sum_probs=35.2
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
|...++.+++.+ |++++++++|||+..|+.+.+.+|..
T Consensus 103 ~~~~~~~~~~~~---~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 103 KPGLILEALKRL---GVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred CHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 778899999998 99999999999999999999999873
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.86 E-value=1.1e-05 Score=93.86 Aligned_cols=67 Identities=19% Similarity=0.258 Sum_probs=53.1
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeCCHhHH
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDDTAEV 826 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~~~eV 826 (854)
.|...+..+++.+ +++++++|||+.+|+.+.+.+|.. +++|.+|.. ...|+|++++..++
T Consensus 386 ~kP~~~~~al~~l-----~~~~~v~VGDs~~Di~aAk~AG~~-----------~I~v~~~~~~~~~~~~~d~~i~~l~el 449 (459)
T PRK06698 386 NKSDLVKSILNKY-----DIKEAAVVGDRLSDINAAKDNGLI-----------AIGCNFDFAQEDELAQADIVIDDLLEL 449 (459)
T ss_pred CCcHHHHHHHHhc-----CcceEEEEeCCHHHHHHHHHCCCe-----------EEEEeCCCCcccccCCCCEEeCCHHHH
Confidence 3677777777765 468999999999999999999973 467777643 24689999999999
Q ss_pred HHHHHHH
Q 003042 827 INLLEGL 833 (854)
Q Consensus 827 ~~~L~~l 833 (854)
.+++..+
T Consensus 450 ~~~l~~~ 456 (459)
T PRK06698 450 KGILSTV 456 (459)
T ss_pred HHHHHHH
Confidence 8887654
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=97.83 E-value=2.7e-05 Score=79.74 Aligned_cols=60 Identities=12% Similarity=0.081 Sum_probs=49.2
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHh--hhhcCCCCCCCCccEEEEEecCCC--cccceEeCCHhHHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESI--EQAVADPSVPGIAEVFACTVGQKP--SMAKYYLDDTAEVI 827 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~a--g~~~~~~~~~~~~~~~aV~vG~~~--s~A~y~l~~~~eV~ 827 (854)
|...+..+++.+ | ++.+++|||+.+|+...+.+ |.. ++.|.+|+.+ ..+.|.+++..|+.
T Consensus 132 kp~~~~~a~~~~---~--~~~~v~vgDs~~di~aA~~a~~Gi~-----------~i~~~~~~~~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 132 KEKLFIKAKEKY---G--DRVVCFVDDLAHNLDAAHEALSQLP-----------VIHMLRGERDHIPKLAHRVKSWNDIE 195 (197)
T ss_pred cHHHHHHHHHHh---C--CCcEEEeCCCHHHHHHHHHHHcCCc-----------EEEecchhhccccchhhhhccHHHHh
Confidence 778999999998 7 78899999999999999998 983 5788888643 26668888877764
|
2 hypothetical protein; Provisional |
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00011 Score=84.11 Aligned_cols=122 Identities=11% Similarity=0.098 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHH
Q 003042 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (854)
Q Consensus 342 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~ 421 (854)
...|+|++.+.++.|++. |=+ |..+ ++...+.++ .+ | ..++.+.+ +....+..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~t--------e~s~kL~~L-~~----y-----~nvvly~~-~~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALT--------EMSSKLMSL-DK----Y-----DNVKLYPN-ITTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecC--------cccHHHHHH-Hh----c-----CCcEEECC-cChHHHHHHHH
Confidence 899999999999999976 544 5433 111233333 11 2 34677776 44567889999
Q ss_pred hCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecC-ccccccCCCceEeCCCCHHHHHHHH
Q 003042 422 IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF-IGCSPSLSGAIRVNPWNVDAVADAM 500 (854)
Q Consensus 422 ~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l~~ai~vnP~d~~~~A~ai 500 (854)
.||+++.+|..||++++..||+.. |-|++.-+. .|..+.+.++.++++.|+++++++|
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~---------------------G~pI~afd~t~~~~~~i~~g~l~~~~~~~~m~~~i 405 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEY---------------------NLLILGFEETAHNRDFIASENIFEHNEVDQLISKL 405 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHc---------------------CCcEEEEecccCCcccccCCceecCCCHHHHHHHH
Confidence 999999999999999999999996 224444444 4555556678999999999999999
Q ss_pred HHHhcCCH
Q 003042 501 DSALQMEN 508 (854)
Q Consensus 501 ~~aL~m~~ 508 (854)
.++|+.+.
T Consensus 406 ~~lL~d~~ 413 (438)
T TIGR02919 406 KDLLNDPN 413 (438)
T ss_pred HHHhcCHH
Confidence 99999874
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=97.82 E-value=4.2e-05 Score=72.73 Aligned_cols=54 Identities=15% Similarity=0.153 Sum_probs=41.1
Q ss_pred eEEEEecCCCCCCCCC--CCC-------CCCHHHHHHHHHcccCCCCeEEEEcCC-Cccchhhhh
Q 003042 586 RLILLDYDGTVMPQTS--EDK-------RPSTEVLSILNDLCNDPKNAVFIVSGR-GKDSLGNWF 640 (854)
Q Consensus 586 klI~~DlDGTLl~~~~--~~~-------~is~~~~~aL~~L~~~~g~~v~I~TGR-~~~~l~~~~ 640 (854)
|+|++||||||++... ... .+.+.+.+.|+.| ++.|+.++|+|++ ........+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~L-k~~g~~l~i~Sn~~~~~~~~~~l 64 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTL-KKNGFLLALASYNDDPHVAYELL 64 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHH-HHCCeEEEEEeCCCCHHHHHHHH
Confidence 6899999999998421 111 2467999999999 8899999999999 555554444
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.79 E-value=3.4e-05 Score=82.05 Aligned_cols=56 Identities=13% Similarity=0.258 Sum_probs=48.6
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCC---CHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcC
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRP---STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~i---s~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 642 (854)
...++|+|||||||++ ..+.+ ++.+.++|.+| ++.|+.++|+|++++..+...++.
T Consensus 124 ~~~kvIvFDLDgTLi~---~~~~v~irdPgV~EaL~~L-kekGikLaIaTS~~Re~v~~~L~~ 182 (301)
T TIGR01684 124 EPPHVVVFDLDSTLIT---DEEPVRIRDPRIYDSLTEL-KKRGCILVLWSYGDRDHVVESMRK 182 (301)
T ss_pred ccceEEEEecCCCCcC---CCCccccCCHHHHHHHHHH-HHCCCEEEEEECCCHHHHHHHHHH
Confidence 3468999999999999 66554 69999999999 899999999999999988877743
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=3.3e-05 Score=80.95 Aligned_cols=69 Identities=12% Similarity=0.040 Sum_probs=53.2
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC--CcccceEeCCHhHHHHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK--PSMAKYYLDDTAEVINL 829 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~--~s~A~y~l~~~~eV~~~ 829 (854)
+......+++++ |++++++++|||+.+|+...+.+|.. .+++|..+.. ...+.....+.+++.++
T Consensus 151 ~p~~~~~~~~~~---~~~p~~~l~igDs~~di~aA~~aG~~----------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 217 (224)
T PRK14988 151 DQRLWQAVAEHT---GLKAERTLFIDDSEPILDAAAQFGIR----------YCLGVTNPDSGIAEKQYQRHPSLNDYRRL 217 (224)
T ss_pred CHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHcCCe----------EEEEEeCCCCCccchhccCCCcHHHHHHH
Confidence 577899999999 99999999999999999999999873 1355666543 24454556777777777
Q ss_pred HHHH
Q 003042 830 LEGL 833 (854)
Q Consensus 830 L~~l 833 (854)
|+.|
T Consensus 218 ~~~l 221 (224)
T PRK14988 218 IPSL 221 (224)
T ss_pred hhhh
Confidence 7765
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=3e-05 Score=80.95 Aligned_cols=66 Identities=18% Similarity=0.129 Sum_probs=50.7
Q ss_pred hHHHHHHHHHHHhhCCCC-CCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEEEec-CC---CcccceEeCCHhH
Q 003042 752 KGIVVKNLISTMRSRGKS-PDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFACTVG-QK---PSMAKYYLDDTAE 825 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~-~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG-~~---~s~A~y~l~~~~e 825 (854)
+......+++.+ |.. ++++++|||+. +|+...+.+|.. ++.|..+ .. ...++|.+++..+
T Consensus 152 ~p~~~~~~~~~~---~~~~~~~~~~vgD~~~~Di~~A~~aG~~-----------~i~~~~~~~~~~~~~~~~~~i~~~~e 217 (224)
T PRK09449 152 DVAIFDYALEQM---GNPDRSRVLMVGDNLHSDILGGINAGID-----------TCWLNAHGREQPEGIAPTYQVSSLSE 217 (224)
T ss_pred CHHHHHHHHHHc---CCCCcccEEEEcCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCeEEECCHHH
Confidence 667889999998 875 58999999998 799999999973 2444432 21 2357899999999
Q ss_pred HHHHHH
Q 003042 826 VINLLE 831 (854)
Q Consensus 826 V~~~L~ 831 (854)
+..+|.
T Consensus 218 l~~~l~ 223 (224)
T PRK09449 218 LEQLLC 223 (224)
T ss_pred HHHHHh
Confidence 988765
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00015 Score=71.86 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=34.9
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
|...+..+++.+ +++++++++|||+.+|+++.+.+|..
T Consensus 105 ~~~~~~~~~~~~---~~~~~e~l~IGD~~~Di~~A~~aGi~ 142 (161)
T TIGR01261 105 KIKLLEPYLKKN---LIDKARSYVIGDRETDMQLAENLGIR 142 (161)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHCCCe
Confidence 777889999988 99999999999999999999999973
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00015 Score=79.32 Aligned_cols=55 Identities=18% Similarity=0.370 Sum_probs=45.5
Q ss_pred CeEEEEecCCCCCCCCCC---------CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhh
Q 003042 585 SRLILLDYDGTVMPQTSE---------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~---------~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~ 640 (854)
.+++++|+||||...... +..+.+.+.+.|++| ++.|+.++++|||+.......+
T Consensus 158 ~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~i~T~r~~~~~~~~l 221 (300)
T PHA02530 158 PKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMY-KAAGYEIIVVSGRDGVCEEDTV 221 (300)
T ss_pred CCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHH-HhCCCEEEEEeCCChhhHHHHH
Confidence 579999999999973211 345789999999999 7889999999999988777666
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=97.69 E-value=1.6e-05 Score=89.92 Aligned_cols=77 Identities=17% Similarity=0.108 Sum_probs=57.6
Q ss_pred CEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC
Q 003042 733 PVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK 812 (854)
Q Consensus 733 ~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~ 812 (854)
+..+.++...-.-+| +......+++.+ |++++++++|||+.+|+.+.+.+|.. +++|++|..
T Consensus 137 Fd~ii~~d~v~~~KP----~p~~~~~a~~~l---gv~p~~~l~VGDs~~Di~aA~~aGi~-----------~I~v~~g~~ 198 (382)
T PLN02940 137 FSVIVGGDEVEKGKP----SPDIFLEAAKRL---NVEPSNCLVIEDSLPGVMAGKAAGME-----------VIAVPSIPK 198 (382)
T ss_pred CCEEEehhhcCCCCC----CHHHHHHHHHHc---CCChhHEEEEeCCHHHHHHHHHcCCE-----------EEEECCCCc
Confidence 334444443322334 778899999999 99999999999999999999999983 567776642
Q ss_pred ----CcccceEeCCHhHHH
Q 003042 813 ----PSMAKYYLDDTAEVI 827 (854)
Q Consensus 813 ----~s~A~y~l~~~~eV~ 827 (854)
...|++.+++..++.
T Consensus 199 ~~~~~~~ad~~i~sl~el~ 217 (382)
T PLN02940 199 QTHLYSSADEVINSLLDLQ 217 (382)
T ss_pred chhhccCccEEeCCHhHcC
Confidence 256788888887754
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.68 E-value=1.6e-05 Score=83.00 Aligned_cols=38 Identities=5% Similarity=0.009 Sum_probs=35.5
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
+......+++.+ |++++++++|||+.+|+...+.+|..
T Consensus 144 ~p~~~~~a~~~~---~~~p~~~l~igDs~~di~aA~~aG~~ 181 (221)
T PRK10563 144 DPALMFHAAEAM---NVNVENCILVDDSSAGAQSGIAAGME 181 (221)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCCE
Confidence 788999999999 99999999999999999999999973
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0012 Score=70.47 Aligned_cols=52 Identities=15% Similarity=0.171 Sum_probs=43.1
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhh
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~ 640 (854)
+++.++||+||||.. ...+-+...++|++| +++|.+++++|..+...-+...
T Consensus 7 ~y~~~l~DlDGvl~~----G~~~ipga~e~l~~L-~~~g~~~iflTNn~~~s~~~~~ 58 (269)
T COG0647 7 KYDGFLFDLDGVLYR----GNEAIPGAAEALKRL-KAAGKPVIFLTNNSTRSREVVA 58 (269)
T ss_pred hcCEEEEcCcCceEe----CCccCchHHHHHHHH-HHcCCeEEEEeCCCCCCHHHHH
Confidence 458899999999998 455668999999999 8999999999988776555443
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00036 Score=69.78 Aligned_cols=48 Identities=19% Similarity=0.314 Sum_probs=41.0
Q ss_pred hcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCC
Q 003042 582 KTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~ 632 (854)
+...+++++|+||||+.. ....+.+.+.++|+.| ++.|..++|+|+.+
T Consensus 22 ~~~v~~vv~D~Dgtl~~~--~~~~~~pgv~e~L~~L-k~~g~~l~I~Sn~~ 69 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYP--DHNEAYPALRDWIEEL-KAAGRKLLIVSNNA 69 (170)
T ss_pred HCCCCEEEEecCCccccC--CCCCcChhHHHHHHHH-HHcCCEEEEEeCCc
Confidence 467899999999999983 2236788999999999 88999999999986
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00069 Score=71.18 Aligned_cols=64 Identities=13% Similarity=0.221 Sum_probs=44.3
Q ss_pred ccccCHHHHHHHHhhcCCeEEEEecCCCCCCCCCC-------------------------------CCCCCHHHHHHHHH
Q 003042 568 FRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTSE-------------------------------DKRPSTEVLSILND 616 (854)
Q Consensus 568 f~~l~~~~i~~~y~~~~~klI~~DlDGTLl~~~~~-------------------------------~~~is~~~~~aL~~ 616 (854)
-...++++|.++-...+.-.|+||+|||+++.++. ...+-+.+.+.|+.
T Consensus 46 ~~~~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~ 125 (237)
T PRK11009 46 VHWVSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDM 125 (237)
T ss_pred eeEEEHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHH
Confidence 44578999999886666679999999999972110 00122336677777
Q ss_pred cccCCCCeEEEEcCCC
Q 003042 617 LCNDPKNAVFIVSGRG 632 (854)
Q Consensus 617 L~~~~g~~v~I~TGR~ 632 (854)
+ ++.|+.++++|||+
T Consensus 126 L-~~~G~~I~iVTnR~ 140 (237)
T PRK11009 126 H-VKRGDSIYFITGRT 140 (237)
T ss_pred H-HHCCCeEEEEeCCC
Confidence 7 67777777777775
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00042 Score=69.32 Aligned_cols=55 Identities=22% Similarity=0.210 Sum_probs=41.0
Q ss_pred CeEEEEecCCCCCCCCCC-----------------------CCCCCHHHHHHHHHcccCCCCeEEEEcCC-Cccchhhhh
Q 003042 585 SRLILLDYDGTVMPQTSE-----------------------DKRPSTEVLSILNDLCNDPKNAVFIVSGR-GKDSLGNWF 640 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~-----------------------~~~is~~~~~aL~~L~~~~g~~v~I~TGR-~~~~l~~~~ 640 (854)
.|+++||+|+||.++... ...+-+.+.+.|+.| +++|..++|+|+. ....+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~L-k~~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTL-KDAGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHH-HHCCCEEEEEeCCCChHHHHHHH
Confidence 589999999999984310 012347888889998 7889999999988 666555555
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0032 Score=66.76 Aligned_cols=48 Identities=19% Similarity=0.326 Sum_probs=40.3
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccch
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSL 636 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l 636 (854)
++++++||+||||.. ...+.+.+.++|++| ++.|.+++|+|..+....
T Consensus 7 ~~~~~~~D~dG~l~~----~~~~~pga~e~L~~L-~~~G~~~~ivTN~~~~~~ 54 (242)
T TIGR01459 7 DYDVFLLDLWGVIID----GNHTYPGAVQNLNKI-IAQGKPVYFVSNSPRNIF 54 (242)
T ss_pred cCCEEEEeccccccc----CCccCccHHHHHHHH-HHCCCEEEEEeCCCCChH
Confidence 358999999999998 345678999999999 889999999998766543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0001 Score=74.58 Aligned_cols=37 Identities=11% Similarity=0.012 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+...+..+++++ |.+++++++|||+.+|++..+.+|.
T Consensus 144 ~p~~~~~~~~~~---~~~~~~~l~igDs~~di~aA~~aG~ 180 (188)
T PRK10725 144 APDTFLRCAQLM---GVQPTQCVVFEDADFGIQAARAAGM 180 (188)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeccHhhHHHHHHCCC
Confidence 778899999999 9999999999999999999999997
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0021 Score=67.82 Aligned_cols=49 Identities=22% Similarity=0.331 Sum_probs=40.7
Q ss_pred EEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEc---CCCccchhhhhc
Q 003042 588 ILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVS---GRGKDSLGNWFS 641 (854)
Q Consensus 588 I~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~T---GR~~~~l~~~~~ 641 (854)
++||+||||++ ....+ +.+.++|+.+ +..|.+++++| ||+...+.+.+.
T Consensus 1 ~lfD~DGvL~~---~~~~~-~~a~e~i~~l-~~~g~~~~~~tN~~~~~~~~~~~~l~ 52 (236)
T TIGR01460 1 FLFDIDGVLWL---GHKPI-PGAAEALNRL-RAKGKPVVFLTNNSSRSEEDYAEKLS 52 (236)
T ss_pred CEEeCcCccCc---CCccC-cCHHHHHHHH-HHCCCeEEEEECCCCCCHHHHHHHHH
Confidence 58999999999 55444 4889999999 88999999998 888887776664
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00024 Score=75.74 Aligned_cols=55 Identities=15% Similarity=0.259 Sum_probs=48.1
Q ss_pred CCeEEEEecCCCCCCCCCCCCCC---CHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcC
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRP---STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~i---s~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 642 (854)
..|+|+|||||||++ ..+.+ ++.+.++|.+| ++.|+.++|+|+.+...+...++.
T Consensus 127 ~~~~i~~D~D~TL~~---~~~~v~irdp~V~EtL~eL-kekGikLaIvTNg~Re~v~~~Le~ 184 (303)
T PHA03398 127 IPHVIVFDLDSTLIT---DEEPVRIRDPFVYDSLDEL-KERGCVLVLWSYGNREHVVHSLKE 184 (303)
T ss_pred eccEEEEecCCCccC---CCCccccCChhHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHH
Confidence 469999999999999 66766 79999999999 899999999998888877777754
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00046 Score=71.84 Aligned_cols=66 Identities=17% Similarity=0.139 Sum_probs=50.0
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeCCHhHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDDTAEV 826 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~~~eV 826 (854)
+....+.+++++. |++++++++|||+. +|+.+.+.+|.. .+.+.+|.. ...++|++++..++
T Consensus 154 ~~~~~~~~~~~~~--~~~~~~~v~igD~~~~di~~A~~~G~~-----------~i~~~~~~~~~~~~~~~~~~~~~~~el 220 (224)
T TIGR02254 154 DKEIFNYALERMP--KFSKEEVLMIGDSLTADIKGGQNAGLD-----------TCWMNPDMHPNPDDIIPTYEIRSLEEL 220 (224)
T ss_pred CHHHHHHHHHHhc--CCCchheEEECCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCceEECCHHHH
Confidence 5667777777641 78899999999998 899999999983 355665532 23577889999888
Q ss_pred HHHH
Q 003042 827 INLL 830 (854)
Q Consensus 827 ~~~L 830 (854)
..+|
T Consensus 221 ~~~~ 224 (224)
T TIGR02254 221 YEIL 224 (224)
T ss_pred HhhC
Confidence 7653
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00026 Score=71.33 Aligned_cols=37 Identities=14% Similarity=0.176 Sum_probs=34.8
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+....+.+++++ +++++++++|||+.+|+.+.+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~v~vgD~~~di~aA~~aG~ 179 (185)
T TIGR01990 143 DPEIFLAAAEGL---GVSPSECIGIEDAQAGIEAIKAAGM 179 (185)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEecCHHHHHHHHHcCC
Confidence 788889999998 9999999999999999999999987
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00098 Score=69.12 Aligned_cols=26 Identities=12% Similarity=0.188 Sum_probs=22.8
Q ss_pred CCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 767 GKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 767 gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
|.+.+...+-|||.||++|++.+++.
T Consensus 173 ~~~~~~~~aY~Ds~~D~pmL~~a~~~ 198 (211)
T PRK11590 173 GTPLRLYSGYSDSKQDNPLLYFCQHR 198 (211)
T ss_pred CCCcceEEEecCCcccHHHHHhCCCC
Confidence 55677889999999999999999973
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0011 Score=66.99 Aligned_cols=39 Identities=26% Similarity=0.343 Sum_probs=32.3
Q ss_pred eCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 747 PQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 747 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+.|..|+..++.+.+.. ++++++|||+.||+++.+.++.
T Consensus 145 ~~g~~K~~~~~~~~~~~------~~~~i~iGD~~~D~~aa~~~d~ 183 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPK------YQHIIYIGDGVTDVCPAKLSDV 183 (188)
T ss_pred CCCCCHHHHHHHHHhhc------CceEEEECCCcchhchHhcCCc
Confidence 45677988888877642 6899999999999999999875
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.00019 Score=73.43 Aligned_cols=35 Identities=11% Similarity=-0.016 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESI 789 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~a 789 (854)
+...+..+++.+ |++++++++|||+.+|+.+.+.+
T Consensus 163 ~p~~~~~~~~~~---~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 163 NPEPLILAAKAL---GVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CHHHHHHHHHHh---CcCcccEEEEeCCHHHHHHHHhC
Confidence 778889999998 99999999999999999987653
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.00017 Score=72.67 Aligned_cols=37 Identities=11% Similarity=0.041 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+......+++.+ |++++++++|||+.+|+.+.+.+|.
T Consensus 144 ~~~~~~~~~~~~---~~~~~~~v~IgD~~~di~aA~~~G~ 180 (185)
T TIGR02009 144 HPETFLLAAELL---GVSPNECVVFEDALAGVQAARAAGM 180 (185)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCC
Confidence 556788899988 9999999999999999999999987
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0005 Score=87.30 Aligned_cols=75 Identities=11% Similarity=0.084 Sum_probs=58.0
Q ss_pred EEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC-
Q 003042 734 VVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK- 812 (854)
Q Consensus 734 ~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~- 812 (854)
..++.+...-.-+| +......+++.+ |+.++++++|||+.+|+...+.+|.. +++|..|..
T Consensus 206 d~iv~~~~~~~~KP----~Pe~~~~a~~~l---gv~p~e~v~IgDs~~Di~AA~~aGm~-----------~I~v~~~~~~ 267 (1057)
T PLN02919 206 DAIVSADAFENLKP----APDIFLAAAKIL---GVPTSECVVIEDALAGVQAARAAGMR-----------CIAVTTTLSE 267 (1057)
T ss_pred CEEEECcccccCCC----CHHHHHHHHHHc---CcCcccEEEEcCCHHHHHHHHHcCCE-----------EEEECCCCCH
Confidence 34445544333344 678889999999 99999999999999999999999973 567777642
Q ss_pred ----CcccceEeCCHhHH
Q 003042 813 ----PSMAKYYLDDTAEV 826 (854)
Q Consensus 813 ----~s~A~y~l~~~~eV 826 (854)
...|++++++..++
T Consensus 268 ~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 268 EILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred HHHhhCCCCEEECChHHC
Confidence 35788999998885
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.00041 Score=67.80 Aligned_cols=35 Identities=20% Similarity=0.310 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIE 790 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag 790 (854)
+...+..+++++ |+++ ++++|||+.+|+.+.+.+|
T Consensus 120 ~~~~~~~~~~~~---~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 120 EPEIFLAALESL---GLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CHHHHHHHHHHc---CCCC-CEEEEeCCHHHHHHHHHcc
Confidence 778999999999 9998 9999999999999998875
|
HAD subfamilies caused by an overly broad single model. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0028 Score=70.40 Aligned_cols=48 Identities=17% Similarity=0.357 Sum_probs=39.0
Q ss_pred CCeEEEEecCCCCCCCCC--------CCCCCCHHHHHHHHHcccCCCCeEEEEcCCC
Q 003042 584 NSRLILLDYDGTVMPQTS--------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~--------~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~ 632 (854)
+.|+++||.||||....+ ..-.+.+.+.+.|..| +++|++++|+|+.+
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~L-k~~G~kL~IvTNq~ 56 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKL-QKAGYKLVMVTNQD 56 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHH-HhCCCeEEEEECCc
Confidence 468999999999998421 1234668899999999 89999999999863
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0018 Score=77.30 Aligned_cols=63 Identities=8% Similarity=0.169 Sum_probs=50.3
Q ss_pred HHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCC-CeEEEEcCCCccchhhhhc
Q 003042 578 SAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPK-NAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 578 ~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g-~~v~I~TGR~~~~l~~~~~ 641 (854)
+.+.....+.+++..||+++..-.....+-+.+.++|+.| ++.| ++++++||.+......+.+
T Consensus 357 ~~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L-~~~g~i~v~ivTgd~~~~a~~i~~ 420 (556)
T TIGR01525 357 NEGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAAL-KRAGGIKLVMLTGDNRSAAEAVAA 420 (556)
T ss_pred HHHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHH-HHcCCCeEEEEeCCCHHHHHHHHH
Confidence 3445556788999999988762223556889999999999 8889 9999999999888887773
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.023 Score=62.07 Aligned_cols=211 Identities=20% Similarity=0.255 Sum_probs=120.8
Q ss_pred Ccccc----ccCHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCC--CCHHHHHHHHHcccCCCCeEEEEcCCCccchhh
Q 003042 565 GPEFR----KLGMHHIASAYNKTNSRLILLDYDGTVMPQTSEDKR--PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGN 638 (854)
Q Consensus 565 ~~~f~----~l~~~~i~~~y~~~~~klI~~DlDGTLl~~~~~~~~--is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~ 638 (854)
.|+|. -|++.++..--+..+.||+-||=|+||.+ +.+. .+..++.-|-+| -..|..|.|+|.=.+....+
T Consensus 123 ~PSFNDvR~ILN~AQi~al~~~~~L~LvTFDgDvTLY~---DG~sl~~d~pvi~~ii~L-L~~gv~VgIVTAAGY~~a~k 198 (408)
T PF06437_consen 123 PPSFNDVRHILNTAQIMALAKNYGLKLVTFDGDVTLYE---DGASLEPDNPVIPRIIKL-LRRGVKVGIVTAAGYPGAEK 198 (408)
T ss_pred CCCHHHHHHHHHHHHHHHhcccCCceEEEEcCCccccc---CCCCCCCCchHHHHHHHH-HhcCCeEEEEeCCCCCChHH
Confidence 45564 35666666655555889999999999999 4443 366777777777 68899999999998887666
Q ss_pred hhcCCc----------cc--------c-eeecCcEEEEECCC----------cceEEc--cccccc---hHHHHHHHHHH
Q 003042 639 WFSGVE----------KL--------G-LSAEHGYFTRWSKN----------SAWEIC--SLTRDF---DWKEIAEPVMK 684 (854)
Q Consensus 639 ~~~~~~----------~l--------~-liaenG~~I~~~~~----------~~~~~~--~~~~~~---~~~~~v~~~~~ 684 (854)
+...+. .+ . +-+|.-+..+++.. ..|... ..-.+. ...+.++..+.
T Consensus 199 Y~~RL~GLL~a~~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~~m~~W~~~dI~~lLD~AE~~L~ 278 (408)
T PF06437_consen 199 YEERLHGLLDAFKDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLPEMKTWSEEDITELLDIAEAALR 278 (408)
T ss_pred HHHHHHHHHHHHHhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccCccccCcCHHHHHHHHHHHHHHHH
Confidence 544321 11 1 11344455555443 123211 000000 12233333333
Q ss_pred HHhcc--CCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcC------CCEEEEEc--CeEEEEeeCCcchHH
Q 003042 685 LYTET--TDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLAN------EPVVVKRG--QHIVEVKPQGVSKGI 754 (854)
Q Consensus 685 ~y~~~--~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~------~~~~v~~g--~~~vEI~p~gvsKg~ 754 (854)
....+ .| ..+-.|+-++-... .....+..++.+|+.-.++..+.. .+++...| +-++||-. |..
T Consensus 279 ~~~~~l~Lp-a~IiRK~RAVGivP-~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDIGd----Ks~ 352 (408)
T PF06437_consen 279 DCVKRLNLP-ATIIRKERAVGIVP-KPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDIGD----KSL 352 (408)
T ss_pred HHHHHcCCC-eeEEeecceeeEec-CCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEcCC----cHH
Confidence 33322 23 33334444443322 111223345666766555555532 34555554 34677766 999
Q ss_pred HHHHHHHHHhh-CCCCCCeEEEEeCC-----cccHHH
Q 003042 755 VVKNLISTMRS-RGKSPDFVLCIGDD-----RSDEDM 785 (854)
Q Consensus 755 al~~ll~~l~~-~gi~~d~vlaiGDs-----~ND~~M 785 (854)
||+.+.+++.. .++.+.+++-|||- .||...
T Consensus 353 GV~~lQ~y~~~~~~i~~~~tLHVGDQF~s~GaNDfka 389 (408)
T PF06437_consen 353 GVRALQKYFDPEGGIKPSETLHVGDQFLSAGANDFKA 389 (408)
T ss_pred hHHHHHHHHHhccCCCccceeeehhhhhccCCcchhh
Confidence 99998887721 37999999999993 488653
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.002 Score=71.21 Aligned_cols=114 Identities=12% Similarity=0.119 Sum_probs=80.8
Q ss_pred CCeEEEEecCCCCCCCCCCC--------CCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEE
Q 003042 584 NSRLILLDYDGTVMPQTSED--------KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYF 655 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~--------~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~ 655 (854)
.+|+|++|+|+||....-.+ ..+.+.+.+.|++| ++.|+.++|||..+...+...+..-+..
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L-~~~Gi~lai~S~n~~~~a~~~l~~~~~~--------- 71 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTL-KKQGFLLALASKNDEDDAKKVFERRKDF--------- 71 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHH-HhCCCEEEEEcCCCHHHHHHHHHhCccc---------
Confidence 47999999999999732001 12347899999999 8899999999999887777666211000
Q ss_pred EEECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEE
Q 003042 656 TRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVV 735 (854)
Q Consensus 656 I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~ 735 (854)
. + +.+.+..
T Consensus 72 ------------~-----------------------~------------------------------------~~~~f~~ 80 (320)
T TIGR01686 72 ------------I-----------------------L------------------------------------QAEDFDA 80 (320)
T ss_pred ------------c-----------------------C------------------------------------cHHHeeE
Confidence 0 0 0000011
Q ss_pred EEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhh
Q 003042 736 VKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIE 790 (854)
Q Consensus 736 v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag 790 (854)
+..+ .. .|...++.+++.+ |++++.+++|||+..|+.+.+.+.
T Consensus 81 ~~~~-----~~----pk~~~i~~~~~~l---~i~~~~~vfidD~~~d~~~~~~~l 123 (320)
T TIGR01686 81 RSIN-----WG----PKSESLRKIAKKL---NLGTDSFLFIDDNPAERANVKITL 123 (320)
T ss_pred EEEe-----cC----chHHHHHHHHHHh---CCCcCcEEEECCCHHHHHHHHHHC
Confidence 1111 12 4999999999999 999999999999999999998864
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.00024 Score=72.94 Aligned_cols=37 Identities=22% Similarity=0.254 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCc-ccHHHHHHhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDR-SDEDMFESIEQ 791 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~-ND~~Mf~~ag~ 791 (854)
+....+.+++.+ |++++++++|||+. +|+...+.+|.
T Consensus 162 ~~~~~~~~~~~~---~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 162 DPKIFQEALERA---GISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred CHHHHHHHHHHc---CCChhHEEEECCCchHHHHHHHHcCC
Confidence 456788899998 99999999999997 89999999986
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0031 Score=65.11 Aligned_cols=56 Identities=14% Similarity=0.216 Sum_probs=44.7
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCCcccceEeCCHhHHHHHHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLE 831 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~s~A~y~l~~~~eV~~~L~ 831 (854)
.......+++++ |++++++++|||+..|+.+.+.+|.. +|. +.+..++...|.
T Consensus 154 ~p~~~~~~~~~~---g~~~~~~l~i~D~~~di~aA~~aG~~-------------~i~-----------v~~~~~~~~~l~ 206 (211)
T TIGR02247 154 DPRIYQLMLERL---GVAPEECVFLDDLGSNLKPAAALGIT-------------TIK-----------VSDEEQAIHDLE 206 (211)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHcCCE-------------EEE-----------ECCHHHHHHHHH
Confidence 466788889998 99999999999999999999999873 443 445667766666
Q ss_pred HHH
Q 003042 832 GLA 834 (854)
Q Consensus 832 ~l~ 834 (854)
.+.
T Consensus 207 ~~~ 209 (211)
T TIGR02247 207 KAT 209 (211)
T ss_pred HHh
Confidence 654
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0045 Score=77.42 Aligned_cols=63 Identities=13% Similarity=0.192 Sum_probs=47.2
Q ss_pred HHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhh
Q 003042 577 ASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (854)
Q Consensus 577 ~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~ 640 (854)
.+.+.....+.+++-.||+++..-.-...+-+...++|++| ++.|++++++||......+.+.
T Consensus 622 ~~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L-~~~gi~v~~~Tgd~~~~a~~ia 684 (834)
T PRK10671 622 ITAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRL-HKAGYRLVMLTGDNPTTANAIA 684 (834)
T ss_pred HHHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHH
Confidence 34445556788888889987631113445668888999999 8899999999999988877776
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0033 Score=74.57 Aligned_cols=58 Identities=12% Similarity=0.194 Sum_probs=45.0
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCC-eEEEEcCCCccchhhhhc
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKN-AVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~-~v~I~TGR~~~~l~~~~~ 641 (854)
...+.++.-.||++...-.....+-+.+.++|++| ++.|+ +++++||.+......+.+
T Consensus 340 ~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L-~~~Gi~~v~vvTgd~~~~a~~i~~ 398 (536)
T TIGR01512 340 AGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAEL-KALGIEKVVMLTGDRRAVAERVAR 398 (536)
T ss_pred CCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHH-HHcCCCcEEEEcCCCHHHHHHHHH
Confidence 33466777778887652223456789999999999 89999 999999999888888773
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0075 Score=71.94 Aligned_cols=58 Identities=10% Similarity=0.174 Sum_probs=46.7
Q ss_pred hcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhh
Q 003042 582 KTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~ 640 (854)
+...+.++++.||+++..-.-...+.+.+.++|++| ++.|++++++||......+.+.
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~L-k~~Gi~v~ilSgd~~~~a~~ia 439 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQAL-KRRGIEPVMLTGDNRKTAKAVA 439 (562)
T ss_pred hCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHH
Confidence 344688999999998752113456789999999999 8899999999999988777776
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0045 Score=52.79 Aligned_cols=61 Identities=16% Similarity=0.285 Sum_probs=49.3
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCC-cccHHHHHHhhhhcCCCCCCCCccEEEEEecCC--------CcccceEeCC
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDD-RSDEDMFESIEQAVADPSVPGIAEVFACTVGQK--------PSMAKYYLDD 822 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs-~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~--------~s~A~y~l~~ 822 (854)
....+..+++.+ +++++++++|||+ .+|+.+.+.+|.. .+.|..|.. ...++|++++
T Consensus 6 ~p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~a~~~G~~-----------~ilV~tG~~~~~~~~~~~~~pd~vv~~ 71 (75)
T PF13242_consen 6 SPGMLEQALKRL---GVDPSRCVMVGDSLETDIEAAKAAGID-----------TILVLTGVYSPEDLEKAEHKPDYVVDD 71 (75)
T ss_dssp SHHHHHHHHHHH---TSGGGGEEEEESSTTTHHHHHHHTTSE-----------EEEESSSSSCCCGHHHSSSTTSEEESS
T ss_pred cHHHHHHHHHHc---CCCHHHEEEEcCCcHhHHHHHHHcCCc-----------EEEECCCCCCHHHHhccCCCCCEEECC
Confidence 455778888888 9999999999999 9999999999983 466666752 2478899998
Q ss_pred HhHH
Q 003042 823 TAEV 826 (854)
Q Consensus 823 ~~eV 826 (854)
..|+
T Consensus 72 l~e~ 75 (75)
T PF13242_consen 72 LKEA 75 (75)
T ss_dssp GGGH
T ss_pred HHhC
Confidence 7653
|
... |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0018 Score=67.63 Aligned_cols=64 Identities=19% Similarity=0.312 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHhhCCCCCCeEEEEeCC-cccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC-------cccceEeCCHh
Q 003042 753 GIVVKNLISTMRSRGKSPDFVLCIGDD-RSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP-------SMAKYYLDDTA 824 (854)
Q Consensus 753 g~al~~ll~~l~~~gi~~d~vlaiGDs-~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~-------s~A~y~l~~~~ 824 (854)
...-+.+++.+ |++|+++++|||+ .||+...+.+|.. +|.+.... ..+.+.+.+..
T Consensus 157 ~~~f~~~~~~~---g~~p~~~l~VgD~~~~di~gA~~~G~~-------------~vwi~~~~~~~~~~~~~~~~~i~~l~ 220 (229)
T COG1011 157 PEIFEYALEKL---GVPPEEALFVGDSLENDILGARALGMK-------------TVWINRGGKPLPDALEAPDYEISSLA 220 (229)
T ss_pred cHHHHHHHHHc---CCCcceEEEECCChhhhhHHHHhcCcE-------------EEEECCCCCCCCCCccCCceEEcCHH
Confidence 45778888888 9999999999998 5787999999873 45443321 46777888888
Q ss_pred HHHHHHHH
Q 003042 825 EVINLLEG 832 (854)
Q Consensus 825 eV~~~L~~ 832 (854)
++..++..
T Consensus 221 ~l~~~~~~ 228 (229)
T COG1011 221 ELLDLLER 228 (229)
T ss_pred HHHHHHhh
Confidence 88887764
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.018 Score=72.37 Aligned_cols=69 Identities=14% Similarity=0.238 Sum_probs=51.2
Q ss_pred HHHHhhcCCeEEEEecCC-----CCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCccccee
Q 003042 577 ASAYNKTNSRLILLDYDG-----TVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLS 649 (854)
Q Consensus 577 ~~~y~~~~~klI~~DlDG-----TLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~li 649 (854)
.+.|.+...|.+++=+++ |++..-.....+-+.+.++|+++ ++.|++++++||-.......+.. .+|+.
T Consensus 495 ~~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l-~~~Gi~v~miTGD~~~tA~~ia~---~~Gi~ 568 (884)
T TIGR01522 495 AAEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTL-ITGGVRIIMITGDSQETAVSIAR---RLGMP 568 (884)
T ss_pred HHHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHH---HcCCC
Confidence 344555567888887766 44431113456789999999999 89999999999999999999883 45554
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0025 Score=62.19 Aligned_cols=32 Identities=16% Similarity=0.103 Sum_probs=26.6
Q ss_pred HHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 757 KNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 757 ~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
.+.++.+ |.+++++++|||+.+|+.+...++.
T Consensus 105 ~k~l~~l---~~~p~~~i~i~Ds~~~~~aa~~ngI 136 (148)
T smart00577 105 VKDLSLL---GRDLSNVIIIDDSPDSWPFHPENLI 136 (148)
T ss_pred eecHHHc---CCChhcEEEEECCHHHhhcCccCEE
Confidence 3446677 8999999999999999998877664
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.24 Score=54.82 Aligned_cols=41 Identities=24% Similarity=0.368 Sum_probs=33.4
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCC----CCeEEEEcCCC
Q 003042 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDP----KNAVFIVSGRG 632 (854)
Q Consensus 587 lI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~----g~~v~I~TGR~ 632 (854)
.|+||+||||.. . ..+-+...++|+.| ... |..+.++|-.+
T Consensus 2 ~~ifD~DGvL~~---g-~~~i~ga~eal~~L-~~~~~~~g~~~~flTNn~ 46 (321)
T TIGR01456 2 GFAFDIDGVLFR---G-KKPIAGASDALRRL-NRNQGQLKIPYIFLTNGG 46 (321)
T ss_pred EEEEeCcCceEC---C-ccccHHHHHHHHHH-hccccccCCCEEEEecCC
Confidence 589999999998 4 44578999999999 676 88888887443
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.061 Score=53.86 Aligned_cols=38 Identities=13% Similarity=0.066 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
|.-.+..+++++ ++++...++|||..+|+....++|..
T Consensus 107 ~~gm~~~~~~~~---~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 107 KPGMLLSALKEY---NIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred ChHHHHHHHHHh---CCCccceEEecCcHHHHHHHHHCCCC
Confidence 666788888888 89999999999999999999999873
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.011 Score=68.79 Aligned_cols=21 Identities=10% Similarity=0.124 Sum_probs=18.7
Q ss_pred CeEEEEeCCcccHHHHHHhhh
Q 003042 771 DFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 771 d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+.+.++||+.+|++|++.++.
T Consensus 140 ~~~~yvGDS~~Dlp~~~~A~~ 160 (479)
T PRK08238 140 RGFDYAGNSAADLPVWAAARR 160 (479)
T ss_pred cCeeEecCCHHHHHHHHhCCC
Confidence 446889999999999999996
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.017 Score=69.59 Aligned_cols=66 Identities=5% Similarity=0.032 Sum_probs=50.9
Q ss_pred HHHHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 575 HIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 575 ~i~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
...+.+.+...+.+++-.|++++..-.-...+-+++.++++++ ++.|++++++||-.......+..
T Consensus 416 ~~~~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l-~~~Gi~v~miTGD~~~ta~~iA~ 481 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQL-RKMGIKTIMITGDNRLTAAAIAA 481 (675)
T ss_pred HHHHHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHH
Confidence 3344555566788888888887752223456789999999999 89999999999999888888873
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.0035 Score=65.53 Aligned_cols=54 Identities=11% Similarity=0.099 Sum_probs=43.1
Q ss_pred CCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 732 EPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 732 ~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
++..++.+.....-+| ........++.| |+.|++|++|.|+.+.+...+++|..
T Consensus 128 ~f~~~v~~~dv~~~KP----~Pd~yL~Aa~~L---gv~P~~CvviEDs~~Gi~Aa~aAGm~ 181 (221)
T COG0637 128 YFDVIVTADDVARGKP----APDIYLLAAERL---GVDPEECVVVEDSPAGIQAAKAAGMR 181 (221)
T ss_pred hcchhccHHHHhcCCC----CCHHHHHHHHHc---CCChHHeEEEecchhHHHHHHHCCCE
Confidence 3344555555555566 667788888888 99999999999999999999999983
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.0013 Score=59.76 Aligned_cols=56 Identities=21% Similarity=0.433 Sum_probs=42.0
Q ss_pred EEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccce
Q 003042 588 ILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGL 648 (854)
Q Consensus 588 I~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~l 648 (854)
|+||+||||.. ...+-+.+.++|++| ++.|.+++++|..+...-..+...+..+|+
T Consensus 1 ~l~D~dGvl~~----g~~~ipga~e~l~~L-~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi 56 (101)
T PF13344_consen 1 FLFDLDGVLYN----GNEPIPGAVEALDAL-RERGKPVVFLTNNSSRSREEYAKKLKKLGI 56 (101)
T ss_dssp EEEESTTTSEE----TTEE-TTHHHHHHHH-HHTTSEEEEEES-SSS-HHHHHHHHHHTTT
T ss_pred CEEeCccEeEe----CCCcCcCHHHHHHHH-HHcCCCEEEEeCCCCCCHHHHHHHHHhcCc
Confidence 68999999998 445667889999999 888999999999887766666554444554
|
... |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.0013 Score=66.34 Aligned_cols=37 Identities=8% Similarity=0.162 Sum_probs=34.4
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+....+.+++++ |.+++++++|||+..|+...+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~l~vgD~~~di~aA~~~G~ 179 (184)
T TIGR01993 143 SPQAYEKALREA---GVDPERAIFFDDSARNIAAAKALGM 179 (184)
T ss_pred CHHHHHHHHHHh---CCCccceEEEeCCHHHHHHHHHcCC
Confidence 677889999999 9999999999999999999999987
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.019 Score=58.04 Aligned_cols=44 Identities=23% Similarity=0.434 Sum_probs=37.5
Q ss_pred eEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHH
Q 003042 741 HIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDED 784 (854)
Q Consensus 741 ~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~ 784 (854)
+....-|++.-||..+..+.......|+..+.++++||+.||+.
T Consensus 153 hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~C 196 (256)
T KOG3120|consen 153 HSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFC 196 (256)
T ss_pred CccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcC
Confidence 34445788889999999998877677999999999999999984
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.015 Score=67.94 Aligned_cols=49 Identities=20% Similarity=0.322 Sum_probs=38.3
Q ss_pred cCCeEEEEecCCCCCCCCCCC---------CCCCHHHHHHHHHcccCCCCeEEEEcCCC
Q 003042 583 TNSRLILLDYDGTVMPQTSED---------KRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~---------~~is~~~~~aL~~L~~~~g~~v~I~TGR~ 632 (854)
.+.|+++||+||||+...+.. .-+.+.+.++|++| .+.|+.++|+|..+
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L-~~~Gy~IvIvTNQ~ 223 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKEL-EADGFKICIFTNQG 223 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHH-HHCCCEEEEEECCc
Confidence 456999999999999732111 11457888999999 89999999999865
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.016 Score=71.42 Aligned_cols=63 Identities=6% Similarity=0.103 Sum_probs=50.0
Q ss_pred HHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 578 SAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 578 ~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
+.+.....+.+++=.||+++..-.-...+-++..++|++| ++.|+.++++||........+.+
T Consensus 541 ~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L-~~~gi~~~llTGd~~~~a~~ia~ 603 (741)
T PRK11033 541 NELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISEL-KALGIKGVMLTGDNPRAAAAIAG 603 (741)
T ss_pred HHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHH
Confidence 4455566788888899987742113456789999999999 88999999999999998888873
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.0086 Score=61.54 Aligned_cols=35 Identities=14% Similarity=0.167 Sum_probs=29.8
Q ss_pred CCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhh
Q 003042 605 RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (854)
Q Consensus 605 ~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~ 640 (854)
.+-+.+.++|+.| ++.|++++++||-.......+.
T Consensus 127 ~~~~~~~~~l~~L-~~~Gi~~~i~TGD~~~~a~~~~ 161 (215)
T PF00702_consen 127 PLRPGAKEALQEL-KEAGIKVAILTGDNESTASAIA 161 (215)
T ss_dssp EBHTTHHHHHHHH-HHTTEEEEEEESSEHHHHHHHH
T ss_pred cchhhhhhhhhhh-hccCcceeeeeccccccccccc
Confidence 3456788999998 8889999999999988888777
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.012 Score=57.24 Aligned_cols=58 Identities=19% Similarity=0.323 Sum_probs=52.0
Q ss_pred hhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 581 NKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 581 ~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
++..+|-|++|+|.||++. .+...+++.++-+..+ ++.|+.++|+|.-+...+..+..
T Consensus 24 ~~~Gikgvi~DlDNTLv~w--d~~~~tpe~~~W~~e~-k~~gi~v~vvSNn~e~RV~~~~~ 81 (175)
T COG2179 24 KAHGIKGVILDLDNTLVPW--DNPDATPELRAWLAEL-KEAGIKVVVVSNNKESRVARAAE 81 (175)
T ss_pred HHcCCcEEEEeccCceecc--cCCCCCHHHHHHHHHH-HhcCCEEEEEeCCCHHHHHhhhh
Confidence 5678999999999999996 5677899999999999 99999999999998888888873
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.026 Score=71.88 Aligned_cols=44 Identities=14% Similarity=0.148 Sum_probs=37.1
Q ss_pred CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceee
Q 003042 603 DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSA 650 (854)
Q Consensus 603 ~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~lia 650 (854)
...+-+++.++|+++ ++.|+.|+++|||....+..+.. .++++.
T Consensus 566 ~Dplr~~v~~aI~~l-~~~Gi~v~~~TGd~~~ta~~ia~---~~gi~~ 609 (997)
T TIGR01106 566 IDPPRAAVPDAVGKC-RSAGIKVIMVTGDHPITAKAIAK---GVGIIS 609 (997)
T ss_pred cCCChHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHH---HcCCCC
Confidence 345679999999999 99999999999999999999884 555543
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.012 Score=54.64 Aligned_cols=54 Identities=26% Similarity=0.409 Sum_probs=43.0
Q ss_pred CCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecC--CC----cccceEeCCHhHHHHHHHHH
Q 003042 767 GKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ--KP----SMAKYYLDDTAEVINLLEGL 833 (854)
Q Consensus 767 gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~--~~----s~A~y~l~~~~eV~~~L~~l 833 (854)
+.+.+.++++||+.||+.|++.+... -|+.++ .+ ..|++++.+..++++++...
T Consensus 90 kk~~~k~vmVGnGaND~laLr~ADlG-------------I~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 90 KKRYEKVVMVGNGANDILALREADLG-------------ICTIQQEGVPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred cCCCcEEEEecCCcchHHHhhhcccc-------------eEEeccCCcchHHHhhchhhhhhHHHHHHHhhcc
Confidence 55678999999999999999999873 244553 33 46899999999999887654
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.037 Score=69.96 Aligned_cols=43 Identities=16% Similarity=0.312 Sum_probs=36.1
Q ss_pred CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCccccee
Q 003042 603 DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLS 649 (854)
Q Consensus 603 ~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~li 649 (854)
...+-+++.++|+++ ++.|++++++||........+.. .+++.
T Consensus 535 ~Dplr~~v~e~I~~l-~~aGI~v~miTGD~~~tA~~ia~---~~gi~ 577 (917)
T TIGR01116 535 LDPPRPEVADAIEKC-RTAGIRVIMITGDNKETAEAICR---RIGIF 577 (917)
T ss_pred eCCCchhHHHHHHHH-HHCCCEEEEecCCCHHHHHHHHH---HcCCC
Confidence 456789999999999 99999999999999998888873 44543
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.0051 Score=60.91 Aligned_cols=59 Identities=20% Similarity=0.254 Sum_probs=41.8
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecC-----CCcccceEeCCHhH
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ-----KPSMAKYYLDDTAE 825 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~-----~~s~A~y~l~~~~e 825 (854)
.|+.+++.+.+ +.+...+++|||+.||++|..-+.. |-..-|+ .+..|+|++++...
T Consensus 159 gKa~~i~~lrk-----~~~~~~~~mvGDGatDlea~~pa~a-------------fi~~~g~~~r~~vk~nak~~~~~f~~ 220 (227)
T KOG1615|consen 159 GKAEVIALLRK-----NYNYKTIVMVGDGATDLEAMPPADA-------------FIGFGGNVIREGVKANAKWYVTDFYV 220 (227)
T ss_pred ccHHHHHHHHh-----CCChheeEEecCCccccccCCchhh-------------hhccCCceEcHhhHhccHHHHHHHHH
Confidence 69999998887 6778899999999999998876543 2111122 35678887766554
Q ss_pred HH
Q 003042 826 VI 827 (854)
Q Consensus 826 V~ 827 (854)
+.
T Consensus 221 L~ 222 (227)
T KOG1615|consen 221 LG 222 (227)
T ss_pred Hc
Confidence 43
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.26 Score=49.67 Aligned_cols=61 Identities=28% Similarity=0.385 Sum_probs=48.6
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccce
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGL 648 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~l 648 (854)
+.+|-+++|+-|||-. +.. ..+...++|++| ++.+..|=++|.-+.++-..+.+++.++++
T Consensus 5 ~~v~gvLlDlSGtLh~---e~~-avpga~eAl~rL-r~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 5 RAVKGVLLDLSGTLHI---EDA-AVPGAVEALKRL-RDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred cccceEEEeccceEec---ccc-cCCCHHHHHHHH-HhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 4578899999999998 444 557788999999 899999999998888877777665555554
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.13 Score=66.19 Aligned_cols=46 Identities=7% Similarity=0.147 Sum_probs=38.3
Q ss_pred CCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCc
Q 003042 604 KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHG 653 (854)
Q Consensus 604 ~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG 653 (854)
..+.+++.++++++ ++.|++++++||........+. .++|++..++
T Consensus 655 d~lr~~~~~~I~~l-~~agi~v~miTGD~~~TA~~iA---~~~gii~~~~ 700 (1054)
T TIGR01657 655 NPLKPDTKEVIKEL-KRASIRTVMITGDNPLTAVHVA---RECGIVNPSN 700 (1054)
T ss_pred cCCCccHHHHHHHH-HHCCCeEEEECCCCHHHHHHHH---HHcCCCCCCc
Confidence 45778999999999 8999999999999999999887 4566665443
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.074 Score=67.48 Aligned_cols=138 Identities=15% Similarity=0.235 Sum_probs=87.6
Q ss_pred CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceEEccccccchHHHHHHHH
Q 003042 603 DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPV 682 (854)
Q Consensus 603 ~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~~~~~~~~~~~~~~v~~~ 682 (854)
...+-+++.++++++ ++.|++++++||-.......+. ..+|+...++..+. ..+ +
T Consensus 577 ~Dplr~~~~~aI~~l-~~aGI~v~miTGD~~~tA~~iA---~~~GI~~~~~~vi~------------G~~--~------- 631 (941)
T TIGR01517 577 KDPLRPGVREAVQEC-QRAGITVRMVTGDNIDTAKAIA---RNCGILTFGGLAME------------GKE--F------- 631 (941)
T ss_pred cCCCchhHHHHHHHH-HHCCCEEEEECCCChHHHHHHH---HHcCCCCCCceEee------------HHH--h-------
Confidence 346779999999998 8999999999999999999888 35565433321110 000 0
Q ss_pred HHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHH
Q 003042 683 MKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLIST 762 (854)
Q Consensus 683 ~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~ 762 (854)
+... .++ +.+.+.+. . -+-.+.| -.|...++.+.+.
T Consensus 632 ------------------------~~l~-------~~e----l~~~i~~~--~-----Vfar~sP--e~K~~iV~~lq~~ 667 (941)
T TIGR01517 632 ------------------------RRLV-------YEE----MDPILPKL--R-----VLARSSP--LDKQLLVLMLKDM 667 (941)
T ss_pred ------------------------hhCC-------HHH----HHHHhccC--e-----EEEECCH--HHHHHHHHHHHHC
Confidence 0000 011 11122221 1 1223444 3588788776543
Q ss_pred HhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEec-CC----CcccceEeC--CHhHHHHHH
Q 003042 763 MRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVG-QK----PSMAKYYLD--DTAEVINLL 830 (854)
Q Consensus 763 l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG-~~----~s~A~y~l~--~~~eV~~~L 830 (854)
| .-|.++||+.||.++++.|+. ++++| .. +..|++++- +...+.+.+
T Consensus 668 ----g---~vVam~GDGvNDapALk~AdV--------------GIAmg~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 668 ----G---EVVAVTGDGTNDAPALKLADV--------------GFSMGISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred ----C---CEEEEECCCCchHHHHHhCCc--------------ceecCCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 3 369999999999999999984 78888 32 567889885 455555555
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.024 Score=57.62 Aligned_cols=157 Identities=18% Similarity=0.188 Sum_probs=93.9
Q ss_pred HHHHHHHHhhcCCeEEEEecCCCCCCCCC---CCCC---------CCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhh
Q 003042 573 MHHIASAYNKTNSRLILLDYDGTVMPQTS---EDKR---------PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (854)
Q Consensus 573 ~~~i~~~y~~~~~klI~~DlDGTLl~~~~---~~~~---------is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~ 640 (854)
.+.++..+++..+|+|++|+|-||++.-+ .+.. ++++.+..+.++ ++.|+.|+|+|=-+...+..
T Consensus 31 ~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l-~~~~I~v~VVTfSd~~~~~~-- 107 (219)
T PTZ00445 31 ADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRL-KNSNIKISVVTFSDKELIPS-- 107 (219)
T ss_pred HHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHH-HHCCCeEEEEEccchhhccc--
Confidence 45677778889999999999999997110 2222 689999999999 89999999999765433111
Q ss_pred cCCcccceeecCcEEEEECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHH
Q 003042 641 SGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKE 720 (854)
Q Consensus 641 ~~~~~l~liaenG~~I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~e 720 (854)
..++.+|. | .+.++..++.-. -..-++ ..+.|. |.+ |+-..
T Consensus 108 ---------~~~~~~Is--g---------------~~li~~~lk~s~---~~~~i~-----~~~~yy---p~~--w~~p~ 148 (219)
T PTZ00445 108 ---------ENRPRYIS--G---------------DRMVEAALKKSK---CDFKIK-----KVYAYY---PKF--WQEPS 148 (219)
T ss_pred ---------cCCcceec--h---------------HHHHHHHHHhcC---ccceee-----eeeeeC---Ccc--cCChh
Confidence 01111111 0 112222221100 000000 011111 111 01111
Q ss_pred HHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 721 LLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 721 l~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
....+ --++|....|..=++.+++.. |+.|+++++|=|+...++..+.+|.
T Consensus 149 ~y~~~-----------------gl~KPdp~iK~yHle~ll~~~---gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 149 DYRPL-----------------GLDAPMPLDKSYHLKQVCSDF---NVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred hhhhh-----------------cccCCCccchHHHHHHHHHHc---CCCHHHeEeecCCHHHHHHHHHCCC
Confidence 11111 113555666777789999998 9999999999999999999999987
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.031 Score=56.41 Aligned_cols=32 Identities=22% Similarity=0.367 Sum_probs=27.0
Q ss_pred HHHHHHHHHcccCCCCeEEEEcCCCccchhhhh
Q 003042 608 TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (854)
Q Consensus 608 ~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~ 640 (854)
+.+.+.|+.+ ++.|..++|+||-....++.+.
T Consensus 92 ~~~~e~i~~~-~~~~~~v~IvS~~~~~~i~~~~ 123 (192)
T PF12710_consen 92 PDAMELIREL-KDNGIKVVIVSGSPDEIIEPIA 123 (192)
T ss_dssp TTHHHHHHHH-HHTTSEEEEEEEEEHHHHHHHH
T ss_pred hhHHHHHHHH-HHCCCEEEEECCCcHHHHHHHH
Confidence 5677888887 7889999999999887777776
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.08 Score=63.99 Aligned_cols=64 Identities=6% Similarity=0.058 Sum_probs=49.4
Q ss_pred HHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 577 ASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 577 ~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
.+.+.+...+.+++-.|++++..-.-...+-+++.+++++| ++.|++++++||=.......+..
T Consensus 417 ~~~~a~~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~L-r~~GI~vvMiTGDn~~TA~aIA~ 480 (679)
T PRK01122 417 VDEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAEL-RKMGIKTVMITGDNPLTAAAIAA 480 (679)
T ss_pred HHHHHhCCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHH
Confidence 34455555677888788887742113456789999999998 99999999999999988888873
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.95 Score=51.00 Aligned_cols=259 Identities=19% Similarity=0.241 Sum_probs=133.9
Q ss_pred HHHHHHHHhcCCCCCeEEEeCcc--cchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCH
Q 003042 178 VFADKVMEVINPDEDYVWIHDYH--LMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTF 255 (854)
Q Consensus 178 ~fa~~i~~~~~~~~D~vwihDyh--l~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~ 255 (854)
..++.+. ..+| |+|..=||- =+-+...+|++.+..|+.++. +|.+|.==++|-..++.. +|.+-- .+
T Consensus 73 ~~~~~~~-~~~p--d~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~--~D~ll~-if 141 (373)
T PF02684_consen 73 KLVERIK-EEKP--DVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKY--VDHLLV-IF 141 (373)
T ss_pred HHHHHHH-HcCC--CEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHH--HhheeE-CC
Confidence 3344333 3467 777777776 245788999999888887776 355555447777666663 444321 12
Q ss_pred HHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc--CCCEE--EEE
Q 003042 256 DYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIV--ILG 331 (854)
Q Consensus 256 ~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~i--il~ 331 (854)
.+-..|.+ +.| +-..|-|+.. +|.-. ..+.. ...++.+ .++++ +|-
T Consensus 142 PFE~~~y~------------~~g-~~~~~VGHPl--------~d~~~-----~~~~~----~~~~~~~l~~~~~iIaLLP 191 (373)
T PF02684_consen 142 PFEPEFYK------------KHG-VPVTYVGHPL--------LDEVK-----PEPDR----AEAREKLLDPDKPIIALLP 191 (373)
T ss_pred cccHHHHh------------ccC-CCeEEECCcc--------hhhhc-----cCCCH----HHHHHhcCCCCCcEEEEeC
Confidence 22223332 111 1133434432 22110 11111 1122222 34443 233
Q ss_pred ecCccccCC-HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCC
Q 003042 332 VDDMDLFKG-ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEP 410 (854)
Q Consensus 332 VdRld~~KG-i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~ 410 (854)
=+|-...|- ++..++|.+++.+++|+++ ++....+. ...+.+.+.....+.. .+++..
T Consensus 192 GSR~~EI~rllP~~l~aa~~l~~~~p~l~----fvvp~a~~--------~~~~~i~~~~~~~~~~------~~~~~~--- 250 (373)
T PF02684_consen 192 GSRKSEIKRLLPIFLEAAKLLKKQRPDLQ----FVVPVAPE--------VHEELIEEILAEYPPD------VSIVII--- 250 (373)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecCCH--------HHHHHHHHHHHhhCCC------CeEEEc---
Confidence 456665544 4888999999999999876 55444321 1122222222221111 122222
Q ss_pred CChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCCCc-----
Q 003042 411 LSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGA----- 485 (854)
Q Consensus 411 ~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~a----- 485 (854)
..+...+++.||+.+++| |.+.+|++..+....-.=+.+-..- -=...+|-..+.|....+-+.
T Consensus 251 --~~~~~~~m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~----~iak~lvk~~~isL~Niia~~~v~PE 319 (373)
T PF02684_consen 251 --EGESYDAMAAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTY----FIAKRLVKVKYISLPNIIAGREVVPE 319 (373)
T ss_pred --CCchHHHHHhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHH----HHHHHhhcCCEeechhhhcCCCcchh
Confidence 246788899999999999 7889998887431000000000000 000011224555555554331
Q ss_pred eEeCCCCHHHHHHHHHHHhcCCHH
Q 003042 486 IRVNPWNVDAVADAMDSALQMENQ 509 (854)
Q Consensus 486 i~vnP~d~~~~A~ai~~aL~m~~~ 509 (854)
++-+--+++.+++++...|..++.
T Consensus 320 liQ~~~~~~~i~~~~~~ll~~~~~ 343 (373)
T PF02684_consen 320 LIQEDATPENIAAELLELLENPEK 343 (373)
T ss_pred hhcccCCHHHHHHHHHHHhcCHHH
Confidence 344556789999999999987754
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.45 Score=51.60 Aligned_cols=168 Identities=14% Similarity=0.193 Sum_probs=112.1
Q ss_pred CCEEEEEecCccccCCHHHHHHHHHHHHHhCC----CCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 003042 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHP----DLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG 400 (854)
Q Consensus 325 ~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p----~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~ 400 (854)
...++++--...+...+.-+|.|+...-++.- ++- ++ |.+|+ |.||..+.+.+++++ ..
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP-~l-lciIT----GKGPlkE~Y~~~I~~-----------~~ 316 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLP-SL-LCIIT----GKGPLKEKYSQEIHE-----------KN 316 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCC-cE-EEEEc----CCCchhHHHHHHHHH-----------hc
Confidence 45788899999999999999999985422211 111 22 33444 477888888888877 56
Q ss_pred CccEEEEcCCCChhhHHHHHHhCcE--EEEccCccCCCCcc--eeeeeeecCCCccccccCCCCCCCCCCCceEEEecCc
Q 003042 401 YEPIVIIKEPLSTQDKVPYYAIAEC--CVVNCVRDGMNLVP--YKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI 476 (854)
Q Consensus 401 ~~pv~~~~~~~~~~el~aly~~ADv--~vv~S~~EG~~Lv~--~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~ 476 (854)
|+.|.+..--++-++.+.++..||. |+-|| .-|+-|.. ....-| +-|+++-.|.
T Consensus 317 ~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtS-SSGLDLPMKVVDMFGc---------------------glPvcA~~fk 374 (444)
T KOG2941|consen 317 LQHVQVCTPWLEAEDYPKLLASADLGVCLHTS-SSGLDLPMKVVDMFGC---------------------GLPVCAVNFK 374 (444)
T ss_pred ccceeeeecccccccchhHhhccccceEeeec-CcccCcchhHHHhhcC---------------------CCceeeecch
Confidence 7788888888999999999999995 55666 35555543 233333 2355555555
Q ss_pred cccccC----CCceEeCCCCHHHHHHHHHHHhcC---CHHHHHHHHHHHhccccccChHHHHHHHHHHH
Q 003042 477 GCSPSL----SGAIRVNPWNVDAVADAMDSALQM---ENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (854)
Q Consensus 477 G~~~~l----~~ai~vnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 538 (854)
|..+| .+|++++ |.+++|+.|..+.+. +..+- ++.++.+.+....+|..++-+..
T Consensus 375 -cl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l----~~lkkn~~e~~e~RW~~~W~~~~ 436 (444)
T KOG2941|consen 375 -CLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADEL----NQLKKNLREEQELRWDESWERTA 436 (444)
T ss_pred -hHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHH----HHHHHhhHHHHhhhHHHHHHHhh
Confidence 55555 3589986 789999999999873 22221 23344444556678877765543
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.21 Score=58.25 Aligned_cols=174 Identities=18% Similarity=0.212 Sum_probs=92.0
Q ss_pred CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceEEccccccchHHHHHHHH
Q 003042 603 DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPV 682 (854)
Q Consensus 603 ~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~~~~~~~~~~~~~~v~~~ 682 (854)
..+.-+.+.-.|+-| ++.|++|+..||-..+...-+. ..-.++.-+-++ +.+.. ..-...+..-
T Consensus 656 EDkLQ~dVk~tLElL-RNAgikiWMLTGDKlETA~ciA---kSs~L~sR~q~i----------hv~~~--v~sr~dah~e 719 (1051)
T KOG0210|consen 656 EDKLQDDVKPTLELL-RNAGIKIWMLTGDKLETAICIA---KSSRLFSRGQYI----------HVIRS--VTSRGDAHNE 719 (1051)
T ss_pred HHHHhhhhHhHHHHH-hhcCcEEEEEcCcchhheeeee---hhccceecCceE----------EEEEe--cCCchHHHHH
Confidence 344567788888888 8999999999998877665444 122332211111 11100 0011222223
Q ss_pred HHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHH
Q 003042 683 MKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLIST 762 (854)
Q Consensus 683 ~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~ 762 (854)
++.+....+.+.+-.. .++. ...+-..+++-+.....+.++.. +-.-.-|+..++.+-++
T Consensus 720 L~~lR~k~~~aLvi~G-~Sl~------------~cl~yye~Ef~el~~~~~aVv~C-------RctPtQKA~v~~llq~~ 779 (1051)
T KOG0210|consen 720 LNNLRRKTDCALVIDG-ESLE------------FCLKYYEDEFIELVCELPAVVCC-------RCTPTQKAQVVRLLQKK 779 (1051)
T ss_pred HHHhhcCCCcEEEEcC-chHH------------HHHHHHHHHHHHHHHhcCcEEEE-------ecChhHHHHHHHHHHHh
Confidence 3333322222221110 0100 01111222222222233333322 22234588887777665
Q ss_pred HhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecC----CCcccceEeCCHhHHHHHHH
Q 003042 763 MRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ----KPSMAKYYLDDTAEVINLLE 831 (854)
Q Consensus 763 l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~----~~s~A~y~l~~~~eV~~~L~ 831 (854)
- | ..+.||||+.||..|.+.|+.. +++ +|+ +.-+|+|-+.....|.++|-
T Consensus 780 t---~---krvc~IGDGGNDVsMIq~A~~G------------iGI-~gkEGkQASLAADfSItqF~Hv~rLLl 833 (1051)
T KOG0210|consen 780 T---G---KRVCAIGDGGNDVSMIQAADVG------------IGI-VGKEGKQASLAADFSITQFSHVSRLLL 833 (1051)
T ss_pred h---C---ceEEEEcCCCccchheeecccc------------eee-ecccccccchhccccHHHHHHHHHHhh
Confidence 4 3 6899999999999999998753 333 232 34688888877777777764
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.083 Score=67.88 Aligned_cols=185 Identities=15% Similarity=0.149 Sum_probs=93.9
Q ss_pred CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceEEccccccc-hHHHHHHH
Q 003042 603 DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDF-DWKEIAEP 681 (854)
Q Consensus 603 ~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~~~~~~~~~-~~~~~v~~ 681 (854)
...+-+.+.++|+.| ++.|++++++||=.......+.. ..+++..+.-.+...+... .+. ...+.+..
T Consensus 629 eD~lq~~v~etI~~L-~~AGIkv~mlTGD~~~TA~~IA~---~~~ii~~~~~~~~i~~~~~-------~~~~~~~~~i~~ 697 (1057)
T TIGR01652 629 EDKLQEGVPETIELL-RQAGIKIWVLTGDKVETAINIGY---SCRLLSRNMEQIVITSESL-------DATRSVEAAIKF 697 (1057)
T ss_pred hhhhhhccHHHHHHH-HHCCCeEEEEcCCcHHHHHHHHH---HhCCCCCCCeEEEEecCch-------hhhHHHHHHHHH
Confidence 345667888888888 88999999999999998888873 4455544433222221110 000 00111111
Q ss_pred HHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHH
Q 003042 682 VMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLIS 761 (854)
Q Consensus 682 ~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~ 761 (854)
.......... .....+...+...-... ......++.+++.+.+......+ +-.+.| -.|+..++.+-+
T Consensus 698 ~~~~~~~~~~-~~~~~~~~~lvi~G~~l----~~~l~~~~~~~f~~l~~~~~~vV-----~aR~sP--~qK~~IV~~lk~ 765 (1057)
T TIGR01652 698 GLEGTSEEFN-NLGDSGNVALVIDGKSL----GYALDEELEKEFLQLALKCKAVI-----CCRVSP--SQKADVVRLVKK 765 (1057)
T ss_pred HHHHHHHhhh-hhccCCceEEEEccHHH----HHHHhhHHHHHHHHHHhhCCEEE-----EeCCCH--HHHHHHHHHHHh
Confidence 1100000000 00001111111111100 00000111223333332222112 223344 458888887765
Q ss_pred HHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEe-cC----CCcccceEeCCHhHHHHHH
Q 003042 762 TMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTV-GQ----KPSMAKYYLDDTAEVINLL 830 (854)
Q Consensus 762 ~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~v-G~----~~s~A~y~l~~~~eV~~~L 830 (854)
.. ..-|+++||+.||.+|++.|+. ||.+ |. +...|+|.+.+...+.++|
T Consensus 766 ~~------~~~vl~iGDG~ND~~mlk~AdV--------------GIgi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 766 ST------GKTTLAIGDGANDVSMIQEADV--------------GVGISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred cC------CCeEEEEeCCCccHHHHhhcCe--------------eeEecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 42 2479999999999999999985 4433 32 3467999988766666655
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.11 Score=62.65 Aligned_cols=67 Identities=6% Similarity=0.076 Sum_probs=48.5
Q ss_pred HHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 574 HHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 574 ~~i~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
+...+.+.+...+.++.-.|++++..-.-...+-+++.++++++ ++.|++++++||-.......+.+
T Consensus 410 ~~~~~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~L-r~~GI~vvMiTGDn~~TA~aIA~ 476 (673)
T PRK14010 410 DALVKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFREL-REMGIETVMCTGDNELTAATIAK 476 (673)
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHH
Confidence 34444555555566655457776641113456789999999999 89999999999999998888874
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.073 Score=54.84 Aligned_cols=65 Identities=12% Similarity=0.073 Sum_probs=46.1
Q ss_pred CCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC---cccc-e-EeCC
Q 003042 748 QGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP---SMAK-Y-YLDD 822 (854)
Q Consensus 748 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~---s~A~-y-~l~~ 822 (854)
.+-.|...++.+ +.. | .+++++||+.||++|++.++. +|++..++ ..|+ + ++.+
T Consensus 129 ~~~~K~~~l~~l-~~~---~---~~~v~vGDs~nDl~ml~~Ag~--------------~ia~~ak~~~~~~~~~~~~~~~ 187 (203)
T TIGR02137 129 QKDPKRQSVIAF-KSL---Y---YRVIAAGDSYNDTTMLSEAHA--------------GILFHAPENVIREFPQFPAVHT 187 (203)
T ss_pred CcchHHHHHHHH-Hhh---C---CCEEEEeCCHHHHHHHHhCCC--------------CEEecCCHHHHHhCCCCCcccC
Confidence 345688888877 444 4 379999999999999999986 46666654 2222 2 4567
Q ss_pred HhHHHHHHHHH
Q 003042 823 TAEVINLLEGL 833 (854)
Q Consensus 823 ~~eV~~~L~~l 833 (854)
.+|++..|...
T Consensus 188 ~~~~~~~~~~~ 198 (203)
T TIGR02137 188 YEDLKREFLKA 198 (203)
T ss_pred HHHHHHHHHHH
Confidence 78877777654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.049 Score=56.77 Aligned_cols=51 Identities=18% Similarity=0.285 Sum_probs=40.9
Q ss_pred CCeEEEEecCCCCCCCCC-----------------------CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccc
Q 003042 584 NSRLILLDYDGTVMPQTS-----------------------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS 635 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~-----------------------~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~ 635 (854)
.+-+++||+|.|+++..+ .....-+.++++++.+ ++.|+.|+++|||+...
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l-~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKI-IELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHH-HHCCCEEEEEcCCChHH
Confidence 467899999999997220 1234558899999999 89999999999999765
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.017 Score=57.03 Aligned_cols=46 Identities=24% Similarity=0.385 Sum_probs=32.6
Q ss_pred eEEEEecCCCCCCCCCCCC---------CCCHHHHHHHHHcccCCCCeEEEEcCCC
Q 003042 586 RLILLDYDGTVMPQTSEDK---------RPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (854)
Q Consensus 586 klI~~DlDGTLl~~~~~~~---------~is~~~~~aL~~L~~~~g~~v~I~TGR~ 632 (854)
|+.+||+||||+...+... -..+.+.++|++| .+.|+.++|+|--+
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l-~~~Gy~IvIvTNQ~ 55 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALREL-HKKGYKIVIVTNQS 55 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHH-HHTTEEEEEEEE-C
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHH-HhcCCeEEEEeCcc
Confidence 6899999999997432111 1345799999999 88999999998653
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.76 Score=51.05 Aligned_cols=277 Identities=15% Similarity=0.172 Sum_probs=143.9
Q ss_pred hcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcc--cchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHh
Q 003042 167 GEWQAYLSANKVFADKVMEVINPDEDYVWIHDYH--LMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL 244 (854)
Q Consensus 167 ~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyh--l~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~l 244 (854)
..|..|++.=+. +.+. +| |++..=|+- =..|...||+..|++||..+.- ||--.|| |.|...+..
T Consensus 69 ~llk~~~~~~~~----i~~~-kp--D~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~---PsVWAWr--~~Ra~~i~~- 135 (381)
T COG0763 69 RLLKIRRELVRY----ILAN-KP--DVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS---PSVWAWR--PKRAVKIAK- 135 (381)
T ss_pred HHHHHHHHHHHH----HHhc-CC--CEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC---cceeeec--hhhHHHHHH-
Confidence 446666554333 3322 56 676665654 2457889999999999998873 4444444 677444444
Q ss_pred hcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc-
Q 003042 245 LNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF- 323 (854)
Q Consensus 245 l~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~- 323 (854)
.+|++.--.+ +-..|.+. .|+. ..|-|++. .|.-.+. ++ .+..|+++
T Consensus 136 -~~D~lLailP-FE~~~y~k----~g~~---------~~yVGHpl--------~d~i~~~-----~~----r~~ar~~l~ 183 (381)
T COG0763 136 -YVDHLLAILP-FEPAFYDK----FGLP---------CTYVGHPL--------ADEIPLL-----PD----REAAREKLG 183 (381)
T ss_pred -HhhHeeeecC-CCHHHHHh----cCCC---------eEEeCChh--------hhhcccc-----cc----HHHHHHHhC
Confidence 2555432222 11112210 0111 22333322 1211111 11 12244444
Q ss_pred ---CCCEEEEEec-C-ccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCC
Q 003042 324 ---DGKIVILGVD-D-MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGK 398 (854)
Q Consensus 324 ---~~~~iil~Vd-R-ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~ 398 (854)
..+.+.+-.| | =+-..-.+-.++|++++.+++|+++ ++.-..+ +.++.++.+... .
T Consensus 184 ~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~~~~---~------- 244 (381)
T COG0763 184 IDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIEEALK---W------- 244 (381)
T ss_pred CCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHHHHhh---c-------
Confidence 3444444443 3 3345566778889999999999987 5544432 233333333221 1
Q ss_pred CCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEe-cC--
Q 003042 399 PGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS-EF-- 475 (854)
Q Consensus 399 ~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S-e~-- 475 (854)
....+.+++ ...+....+.+||+.+..| |.+.+|++.|+. |.|++ ..
T Consensus 245 ~~~~~~~~~----~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~---------------------P~Vv~Yk~~~ 294 (381)
T COG0763 245 EVAGLSLIL----IDGEKRKAFAAADAALAAS-----GTATLEAALAGT---------------------PMVVAYKVKP 294 (381)
T ss_pred cccCceEEe----cCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCC---------------------CEEEEEeccH
Confidence 011122222 2357888999999999998 889999999843 33332 22
Q ss_pred --------------ccccccCCCceEe-----CCCCHHHHHHHHHHHhcCCHH--HHHHHHHHHhccccccChHHHHHHH
Q 003042 476 --------------IGCSPSLSGAIRV-----NPWNVDAVADAMDSALQMENQ--EKILRHEKHYKYISSHDVAYWAKSI 534 (854)
Q Consensus 476 --------------~G~~~~l~~ai~v-----nP~d~~~~A~ai~~aL~m~~~--er~~r~~~~~~~v~~~~~~~W~~~~ 534 (854)
.+....+-+-.+| .--.++.+|+++...+..+.. +.......+++++.+..+..-+.+.
T Consensus 295 it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA~~ 374 (381)
T COG0763 295 ITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLREDPASEIAAQA 374 (381)
T ss_pred HHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 2222222221111 112368999999999887732 2233444455555555355555544
Q ss_pred HHH
Q 003042 535 DQD 537 (854)
Q Consensus 535 l~~ 537 (854)
+-+
T Consensus 375 vl~ 377 (381)
T COG0763 375 VLE 377 (381)
T ss_pred HHH
Confidence 433
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.25 Score=63.76 Aligned_cols=46 Identities=11% Similarity=0.143 Sum_probs=36.2
Q ss_pred CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecC
Q 003042 603 DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEH 652 (854)
Q Consensus 603 ~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaen 652 (854)
...+-+.+.+++++| ++.|+.++++||-.......+.. ..+++..+
T Consensus 724 ~D~lr~~v~~~I~~l-~~agi~v~mlTGD~~~tAi~IA~---s~~Ll~~~ 769 (1178)
T PLN03190 724 EDKLQQGVPEAIESL-RTAGIKVWVLTGDKQETAISIGY---SSKLLTNK 769 (1178)
T ss_pred ecCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHH---HhCCCCCC
Confidence 345778899999999 89999999999999988887763 34454443
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=94.35 E-value=0.04 Score=56.36 Aligned_cols=42 Identities=17% Similarity=0.176 Sum_probs=37.6
Q ss_pred CCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 748 QGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 748 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
.+-.|...++.+++.. ++++++++++|||.+|++|++.+|..
T Consensus 152 ~g~~K~~~l~~~~~~~---~~~~~~~~~~gDs~~D~~~~~~a~~~ 193 (202)
T TIGR01490 152 KGEGKVHALAELLAEE---QIDLKDSYAYGDSISDLPLLSLVGHP 193 (202)
T ss_pred CChHHHHHHHHHHHHc---CCCHHHcEeeeCCcccHHHHHhCCCc
Confidence 4567888899999887 89999999999999999999999973
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.31 Score=61.47 Aligned_cols=42 Identities=19% Similarity=0.229 Sum_probs=35.7
Q ss_pred CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccce
Q 003042 603 DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGL 648 (854)
Q Consensus 603 ~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~l 648 (854)
...+-+++.++++++ ++.|++++++||-.......+.+ ++|+
T Consensus 548 ~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~---~lGI 589 (902)
T PRK10517 548 LDPPKETTAPALKAL-KASGVTVKILTGDSELVAAKVCH---EVGL 589 (902)
T ss_pred hCcchhhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHH---HcCC
Confidence 345779999999998 89999999999999999988884 4555
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.009 Score=58.65 Aligned_cols=99 Identities=16% Similarity=0.277 Sum_probs=48.7
Q ss_pred HHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCCh-----HHHHHH-hhcCCeEeecC
Q 003042 181 DKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVR-----DEILKS-LLNSDLIGFHT 254 (854)
Q Consensus 181 ~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r-----~eil~~-ll~~dligf~t 254 (854)
.++++..+| |+|++|.++...+...-.. +.++.+++|.+++.........+. ..+.+. .-.+|.+-.-+
T Consensus 73 ~~~i~~~~~--DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS 147 (177)
T PF13439_consen 73 RRLIKKEKP--DIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVS 147 (177)
T ss_dssp HHHHHHHT---SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESS
T ss_pred HHHHHHcCC--CeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEEC
Confidence 334455566 8999999887765543332 789999999887531111111111 111112 23577776655
Q ss_pred HHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHH
Q 003042 255 FDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFE 304 (854)
Q Consensus 255 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~ 304 (854)
..-++.+.+ .|+. ..++.++|+|||.+.|+
T Consensus 148 ~~~~~~l~~-----~~~~---------------~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 148 ESTKDELIK-----FGIP---------------PEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHHHHHHH-----HT-----------------SS-EEE----B-CCCH-
T ss_pred HHHHHHHHH-----hCCc---------------ccCCEEEECCccHHHcC
Confidence 544444432 1211 13688999999999874
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.06 Score=53.40 Aligned_cols=60 Identities=25% Similarity=0.396 Sum_probs=41.4
Q ss_pred ccccccCHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCC--eEEEEcC
Q 003042 566 PEFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKN--AVFIVSG 630 (854)
Q Consensus 566 ~~f~~l~~~~i~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~--~v~I~TG 630 (854)
+++..++.+.- ..++..+|.++||.|.||+.. ....++++..+.++++ ++.+. .|+|+|.
T Consensus 24 ~si~~I~~~~~--~Lk~~Gik~li~DkDNTL~~~--~~~~i~~~~~~~~~~l-~~~~~~~~v~IvSN 85 (168)
T PF09419_consen 24 PSIRDIDFEAN--HLKKKGIKALIFDKDNTLTPP--YEDEIPPEYAEWLNEL-KKQFGKDRVLIVSN 85 (168)
T ss_pred CChhhCCcchh--hhhhcCceEEEEcCCCCCCCC--CcCcCCHHHHHHHHHH-HHHCCCCeEEEEEC
Confidence 34555555431 135678999999999999963 5678899999999998 43332 3554443
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.2 Score=53.16 Aligned_cols=91 Identities=20% Similarity=0.438 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHh-cCCCCCeEEEeCcccchHHHHHHhccC------CCeEEEEecCC-C----CChhhhhc--CC
Q 003042 170 QAYLSANKVFADKVMEV-INPDEDYVWIHDYHLMVLPSFLRKRFH------RVKVGFFLHSP-F----PSSEIYRT--LP 235 (854)
Q Consensus 170 ~~Y~~vN~~fa~~i~~~-~~~~~D~vwihDyhl~llp~~lr~~~~------~~~i~~flH~p-f----P~~e~~~~--lp 235 (854)
..|.-.++.-++.+... .+| |+|++||.|-.++|.+|++... ++|+.|+.|-. | |. +.+.. +|
T Consensus 114 ~rf~~fs~a~le~~~~l~~~p--DIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~-~~~~~~gl~ 190 (245)
T PF08323_consen 114 ERFAFFSRAALELLKKLGWKP--DIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPP-EDLKALGLP 190 (245)
T ss_dssp HHHHHHHHHHHHHHCTCT-S---SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEG-GGGGCTT-G
T ss_pred HHHHHHHHHHHHHHHhhCCCC--CEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCH-HHHHHcCCC
Confidence 34444444444433331 234 9999999999999999999864 69999999953 2 32 22221 33
Q ss_pred Ch--------------HHHHHHhhcCCeEeecCHHHHHHHHH
Q 003042 236 VR--------------DEILKSLLNSDLIGFHTFDYARHFLS 263 (854)
Q Consensus 236 ~r--------------~eil~~ll~~dligf~t~~~~~~Fl~ 263 (854)
+. .-+--|+..||.|..-++.|++.-++
T Consensus 191 ~~~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 191 DEYFQNLDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp GGGS-STTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred HHHhccccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 21 24456899999999999999987554
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.19 Score=64.28 Aligned_cols=44 Identities=11% Similarity=0.194 Sum_probs=37.1
Q ss_pred CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceee
Q 003042 603 DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSA 650 (854)
Q Consensus 603 ~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~lia 650 (854)
...+-+++.++++++ ++.|++++++||........+. ..+|+..
T Consensus 644 ~Dp~r~~v~~aI~~l-~~aGIkv~MiTGD~~~tA~~iA---~~~Gi~~ 687 (1053)
T TIGR01523 644 YDPPRNESAGAVEKC-HQAGINVHMLTGDFPETAKAIA---QEVGIIP 687 (1053)
T ss_pred ecCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHH---HHcCCCC
Confidence 345778999999998 9999999999999999999888 4556643
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.38 Score=60.53 Aligned_cols=42 Identities=12% Similarity=0.147 Sum_probs=35.5
Q ss_pred CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccce
Q 003042 603 DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGL 648 (854)
Q Consensus 603 ~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~l 648 (854)
...+-+++.++++++ ++.|++++++||-.......+.+ ++|+
T Consensus 513 ~Dp~R~~~~~aI~~l-~~aGI~vvmiTGD~~~tA~aIA~---~lGI 554 (867)
T TIGR01524 513 LDPPKESTKEAIAAL-FKNGINVKVLTGDNEIVTARICQ---EVGI 554 (867)
T ss_pred eCCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHH---HcCC
Confidence 345779999999998 99999999999999998888874 4555
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=93.85 E-value=0.23 Score=61.44 Aligned_cols=167 Identities=16% Similarity=0.179 Sum_probs=98.8
Q ss_pred HHHhhcCCeEEEEec---CC--CCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecC
Q 003042 578 SAYNKTNSRLILLDY---DG--TVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEH 652 (854)
Q Consensus 578 ~~y~~~~~klI~~Dl---DG--TLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaen 652 (854)
+.+.....|.+++=+ ++ +++..-.-...+-+++.++++++ ++.|++++++||........+.+ ++|+...
T Consensus 410 ~~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~---~lGI~~~- 484 (755)
T TIGR01647 410 DELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERA-RHLGVEVKMVTGDHLAIAKETAR---RLGLGTN- 484 (755)
T ss_pred HHHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHH---HcCCCCC-
Confidence 334445567777755 33 44431123456789999999998 89999999999999999999884 4554210
Q ss_pred cEEEEECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCC
Q 003042 653 GYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANE 732 (854)
Q Consensus 653 G~~I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~ 732 (854)
+ .... .+ . .|.. ....+ .+++.+ .+.+.
T Consensus 485 ---~-----------~~~~---------~l----~---~~~~-----------~~~~~-------~~~~~~----~~~~~ 512 (755)
T TIGR01647 485 ---I-----------YTAD---------VL----L---KGDN-----------RDDLP-------SGELGE----MVEDA 512 (755)
T ss_pred ---C-----------cCHH---------Hh----c---CCcc-----------hhhCC-------HHHHHH----HHHhC
Confidence 0 0000 00 0 0000 00000 112222 22221
Q ss_pred CEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC
Q 003042 733 PVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK 812 (854)
Q Consensus 733 ~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~ 812 (854)
. -+-++.|. +|...++.+.+. | .-|.++||+.||.+.++.|+. ++++|..
T Consensus 513 ~-------vfAr~~Pe--~K~~iV~~lq~~----G---~~VamvGDGvNDapAL~~AdV--------------GIAm~~g 562 (755)
T TIGR01647 513 D-------GFAEVFPE--HKYEIVEILQKR----G---HLVGMTGDGVNDAPALKKADV--------------GIAVAGA 562 (755)
T ss_pred C-------EEEecCHH--HHHHHHHHHHhc----C---CEEEEEcCCcccHHHHHhCCe--------------eEEecCC
Confidence 1 23345553 587777776542 4 469999999999999999974 6778753
Q ss_pred ----CcccceEeC--CHhHHHHHHH
Q 003042 813 ----PSMAKYYLD--DTAEVINLLE 831 (854)
Q Consensus 813 ----~s~A~y~l~--~~~eV~~~L~ 831 (854)
+..|+.++- +...+...++
T Consensus 563 tdvAkeaADivLl~d~l~~I~~ai~ 587 (755)
T TIGR01647 563 TDAARSAADIVLTEPGLSVIVDAIL 587 (755)
T ss_pred cHHHHHhCCEEEEcCChHHHHHHHH
Confidence 567888773 4555554443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=93.78 E-value=0.34 Score=61.07 Aligned_cols=137 Identities=20% Similarity=0.236 Sum_probs=86.1
Q ss_pred CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceEEccccccchHHHHHHHH
Q 003042 603 DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPV 682 (854)
Q Consensus 603 ~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~~~~~~~~~~~~~~v~~~ 682 (854)
...+-+++.++++++ ++.|++++++||=.......+.+ ++|+.. +.. +.
T Consensus 548 ~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~aIA~---~lGI~~--~~v------------i~------------- 596 (903)
T PRK15122 548 LDPPKESAAPAIAAL-RENGVAVKVLTGDNPIVTAKICR---EVGLEP--GEP------------LL------------- 596 (903)
T ss_pred cCccHHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHH---HcCCCC--CCc------------cc-------------
Confidence 346779999999998 99999999999999999988884 455521 100 00
Q ss_pred HHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHH
Q 003042 683 MKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLIST 762 (854)
Q Consensus 683 ~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~ 762 (854)
|..++ ..+ .+++.+ ...+. .-+-.+.| -+|...++.+.+.
T Consensus 597 ---------G~el~-----------~~~-------~~el~~----~v~~~-------~VfAr~sP--e~K~~iV~~Lq~~ 636 (903)
T PRK15122 597 ---------GTEIE-----------AMD-------DAALAR----EVEER-------TVFAKLTP--LQKSRVLKALQAN 636 (903)
T ss_pred ---------hHhhh-----------hCC-------HHHHHH----HhhhC-------CEEEEeCH--HHHHHHHHHHHhC
Confidence 00000 000 011211 12221 12233445 3487777776542
Q ss_pred HhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEe--CCHhHHHHHHH
Q 003042 763 MRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYL--DDTAEVINLLE 831 (854)
Q Consensus 763 l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l--~~~~eV~~~L~ 831 (854)
| .-|.++||+.||-++++.|+ ++++||.. +..|+.++ ++...+.+.++
T Consensus 637 ----G---~vVamtGDGvNDaPALk~AD--------------VGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~ 690 (903)
T PRK15122 637 ----G---HTVGFLGDGINDAPALRDAD--------------VGISVDSGADIAKESADIILLEKSLMVLEEGVI 690 (903)
T ss_pred ----C---CEEEEECCCchhHHHHHhCC--------------EEEEeCcccHHHHHhcCEEEecCChHHHHHHHH
Confidence 3 46999999999999999997 47888853 57888887 34555544443
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=93.65 E-value=0.78 Score=52.40 Aligned_cols=139 Identities=13% Similarity=0.133 Sum_probs=79.0
Q ss_pred EEEEEecC-ccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhh---------cc
Q 003042 327 IVILGVDD-MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINL---------NF 396 (854)
Q Consensus 327 ~iil~VdR-ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~---------~~ 396 (854)
.+++.-.| =+..++++..++|++++.++ |+ +.++....+. .+++.+++.+.+. .++. .|
T Consensus 208 lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~----~~~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~~ 276 (396)
T TIGR03492 208 IALLPGSRPPEAYRNLKLLLRALEALPDS-QP----FVFLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSLF 276 (396)
T ss_pred EEEECCCCHHHHHccHHHHHHHHHHHhhC-CC----eEEEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchhh
Confidence 45566677 44567888999999988655 44 3355444332 2333444333221 0000 00
Q ss_pred CCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCc
Q 003042 397 GKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFI 476 (854)
Q Consensus 397 ~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~ 476 (854)
. ...+.++. ...+..++|+.||++|..| |-+..|+++++. |.|+--+.
T Consensus 277 ~---~~~~~v~~---~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~---------------------P~Ilip~~ 324 (396)
T TIGR03492 277 Q---KGTLEVLL---GRGAFAEILHWADLGIAMA-----GTATEQAVGLGK---------------------PVIQLPGK 324 (396)
T ss_pred c---cCceEEEe---chHhHHHHHHhCCEEEECc-----CHHHHHHHHhCC---------------------CEEEEeCC
Confidence 0 00122222 2467899999999999886 345589998843 44443321
Q ss_pred cc------ccc---C-CCceEeCCCCHHHHHHHHHHHhcCCH
Q 003042 477 GC------SPS---L-SGAIRVNPWNVDAVADAMDSALQMEN 508 (854)
Q Consensus 477 G~------~~~---l-~~ai~vnP~d~~~~A~ai~~aL~m~~ 508 (854)
+- .+. + .+++.+...+.+.+++++.++|+.++
T Consensus 325 ~~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d~~ 366 (396)
T TIGR03492 325 GPQFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLADPE 366 (396)
T ss_pred CCHHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcCHH
Confidence 11 111 1 34566666778999999999988643
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.087 Score=51.50 Aligned_cols=55 Identities=13% Similarity=0.315 Sum_probs=39.9
Q ss_pred EEEEecCCCCCCCCC--------CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccc---hhhhhcC
Q 003042 587 LILLDYDGTVMPQTS--------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS---LGNWFSG 642 (854)
Q Consensus 587 lI~~DlDGTLl~~~~--------~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~---l~~~~~~ 642 (854)
++++|+||||+.... ......+.+.+..+++ +++|+.++-+|+|+... .+.|+..
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i-~~~GY~ilYlTaRp~~qa~~Tr~~L~~ 66 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKI-ADNGYKILYLTARPIGQANRTRSWLAQ 66 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHH-HHCCeEEEEECcCcHHHHHHHHHHHHH
Confidence 489999999998310 0013457778888998 89999999999999653 4445543
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=93.27 E-value=0.072 Score=57.02 Aligned_cols=54 Identities=28% Similarity=0.418 Sum_probs=40.4
Q ss_pred cCCeEEEEecCCCCCCCCC-------C----------------CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchh
Q 003042 583 TNSRLILLDYDGTVMPQTS-------E----------------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLG 637 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~-------~----------------~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~ 637 (854)
.+...|+||+|+|+++..+ . ...+-+.+.+.|+.+ .+.|..++++|+|+.....
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L-~~~G~~v~iVTnR~~~~~~ 149 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYA-NSKGVKIFYVSNRSEKEKA 149 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHH-HHCCCeEEEEeCCCcchHH
Confidence 4568999999999996321 0 112346778899998 7899999999999865544
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=93.27 E-value=0.71 Score=49.18 Aligned_cols=57 Identities=18% Similarity=0.268 Sum_probs=42.2
Q ss_pred eeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK 812 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~ 812 (854)
.-.|.+||.++..++.++ |..|+.+++|-|+...+.-.+.+=.. .+-..+++.+...
T Consensus 157 ft~~~~KG~~L~~fL~~~---~~~pk~IIfIDD~~~nl~sv~~a~k~-------~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 157 FTGGQDKGEVLKYFLDKI---NQSPKKIIFIDDNKENLKSVEKACKK-------SGIDFIGFHYTGA 213 (252)
T ss_pred EeCCCccHHHHHHHHHHc---CCCCCeEEEEeCCHHHHHHHHHHHhh-------CCCcEEEEEEcch
Confidence 455788999999999999 99999999999997666555544221 1224677877654
|
The function is not known. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.26 E-value=0.39 Score=58.35 Aligned_cols=138 Identities=17% Similarity=0.283 Sum_probs=95.1
Q ss_pred HHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEE
Q 003042 577 ASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFT 656 (854)
Q Consensus 577 ~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I 656 (854)
...+.....-++++-.||.++..-.-...+-++..+++++| ++.|+++++.||-.....+.+.+ ++|+.
T Consensus 509 ~~~~~~~G~t~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L-~~~Gi~~~mLTGDn~~~A~~iA~---~lGId------- 577 (713)
T COG2217 509 IEALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAAL-KALGIKVVMLTGDNRRTAEAIAK---ELGID------- 577 (713)
T ss_pred HHHHHhcCCeEEEEEECCEEEEEEEEeCCCChhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHH---HcChH-------
Confidence 34444444448999999977641112446778999999999 89999999999998888877763 23220
Q ss_pred EECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEE
Q 003042 657 RWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVV 736 (854)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v 736 (854)
+++. +.-|+
T Consensus 578 ---------------------------~v~A--------------------ellPe------------------------ 586 (713)
T COG2217 578 ---------------------------EVRA--------------------ELLPE------------------------ 586 (713)
T ss_pred ---------------------------hhec--------------------cCCcH------------------------
Confidence 0000 01111
Q ss_pred EEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----
Q 003042 737 KRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK---- 812 (854)
Q Consensus 737 ~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~---- 812 (854)
+|...++.+.++ | ..|+++||+.||-+.+..++ +++++|..
T Consensus 587 --------------dK~~~V~~l~~~----g---~~VamVGDGINDAPALA~Ad--------------VGiAmG~GtDvA 631 (713)
T COG2217 587 --------------DKAEIVRELQAE----G---RKVAMVGDGINDAPALAAAD--------------VGIAMGSGTDVA 631 (713)
T ss_pred --------------HHHHHHHHHHhc----C---CEEEEEeCCchhHHHHhhcC--------------eeEeecCCcHHH
Confidence 266666766543 3 57999999999999999997 57888874
Q ss_pred CcccceEe--CCHhHHHHHHH
Q 003042 813 PSMAKYYL--DDTAEVINLLE 831 (854)
Q Consensus 813 ~s~A~y~l--~~~~eV~~~L~ 831 (854)
...|+.++ ++...|.+.++
T Consensus 632 ~eaADvvL~~~dL~~v~~ai~ 652 (713)
T COG2217 632 IEAADVVLMRDDLSAVPEAID 652 (713)
T ss_pred HHhCCEEEecCCHHHHHHHHH
Confidence 46788876 46777777665
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=93.15 E-value=0.38 Score=47.63 Aligned_cols=40 Identities=20% Similarity=0.219 Sum_probs=33.0
Q ss_pred eeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
-+-|.+|+..++.+.+ +++.++++|||..|++..+.....
T Consensus 142 s~fG~dK~~vI~~l~e-------~~e~~fy~GDsvsDlsaaklsDll 181 (220)
T COG4359 142 SQFGHDKSSVIHELSE-------PNESIFYCGDSVSDLSAAKLSDLL 181 (220)
T ss_pred cccCCCcchhHHHhhc-------CCceEEEecCCcccccHhhhhhhH
Confidence 3458899999988865 357799999999999998887763
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=93.12 E-value=0.29 Score=57.68 Aligned_cols=59 Identities=8% Similarity=0.139 Sum_probs=41.7
Q ss_pred hcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 582 KTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
....+.+++=+|++++..-.....+-+++.++++.| ++.|+.++++||........+..
T Consensus 324 ~~g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l-~~~gi~~~~ltGD~~~~a~~ia~ 382 (499)
T TIGR01494 324 QSGLRVLAVASKETLLGLLGLEDPLRDDAKETISEL-REAGIRVIMLTGDNVLTAKAIAK 382 (499)
T ss_pred hCCCEEEEEEECCeEEEEEEecCCCchhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHH
Confidence 344455555566665532113445678888888888 77899999999999988887763
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.61 E-value=0.46 Score=60.06 Aligned_cols=40 Identities=13% Similarity=0.255 Sum_probs=34.3
Q ss_pred CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcC
Q 003042 602 EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (854)
Q Consensus 602 ~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 642 (854)
....|-+++.++++.+ ++.|++++++||=.......+..+
T Consensus 544 ~~Dppr~~v~~aI~~l-~~AGI~v~MiTGD~~~TA~aIa~~ 583 (917)
T COG0474 544 IEDPPREDVKEAIEEL-REAGIKVWMITGDHVETAIAIAKE 583 (917)
T ss_pred ccCCCCccHHHHHHHH-HHCCCcEEEECCCCHHHHHHHHHH
Confidence 3446778999999998 999999999999999999888743
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=92.33 E-value=0.18 Score=53.69 Aligned_cols=50 Identities=26% Similarity=0.372 Sum_probs=38.2
Q ss_pred CeEEEEecCCCCCCCCC-----------------C-------CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccc
Q 003042 585 SRLILLDYDGTVMPQTS-----------------E-------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS 635 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~-----------------~-------~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~ 635 (854)
.-+++||+|+|+++..+ . ....-+.+++.++.+ ++.|..|+++|||+-..
T Consensus 101 ~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l-~~~G~kIf~VSgR~e~~ 174 (275)
T TIGR01680 101 KDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKL-VSLGFKIIFLSGRLKDK 174 (275)
T ss_pred CCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHH-HHCCCEEEEEeCCchhH
Confidence 47899999999994110 0 123347788889998 89999999999998654
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=91.85 E-value=8.1 Score=43.80 Aligned_cols=73 Identities=14% Similarity=0.165 Sum_probs=48.4
Q ss_pred EEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccc----cc
Q 003042 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC----SP 480 (854)
Q Consensus 405 ~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~----~~ 480 (854)
+.+.+.+++. +++..||++| .+-|+| +..|+++++. |+|+.-+.+- +.
T Consensus 290 v~~~~~~p~~---~ll~~~d~~I---~hgG~~-t~~eal~~Gv---------------------P~v~~P~~~dQ~~~a~ 341 (401)
T cd03784 290 VRVVDFVPHD---WLLPRCAAVV---HHGGAG-TTAAALRAGV---------------------PQLVVPFFGDQPFWAA 341 (401)
T ss_pred eEEeCCCCHH---HHhhhhheee---ecCCch-hHHHHHHcCC---------------------CEEeeCCCCCcHHHHH
Confidence 4455666655 4578899998 456765 6689999843 5555544442 11
Q ss_pred cC---CCceEeCCC--CHHHHHHHHHHHhc
Q 003042 481 SL---SGAIRVNPW--NVDAVADAMDSALQ 505 (854)
Q Consensus 481 ~l---~~ai~vnP~--d~~~~A~ai~~aL~ 505 (854)
.+ .-|+.+++. +.+++++++.++|+
T Consensus 342 ~~~~~G~g~~l~~~~~~~~~l~~al~~~l~ 371 (401)
T cd03784 342 RVAELGAGPALDPRELTAERLAAALRRLLD 371 (401)
T ss_pred HHHHCCCCCCCCcccCCHHHHHHHHHHHhC
Confidence 12 225666554 68999999999987
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=91.73 E-value=0.28 Score=50.88 Aligned_cols=64 Identities=17% Similarity=0.254 Sum_probs=44.1
Q ss_pred cchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecC------CCcccceEeCCH
Q 003042 750 VSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ------KPSMAKYYLDDT 823 (854)
Q Consensus 750 vsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~------~~s~A~y~l~~~ 823 (854)
..|..+++.+. ..++.+++|||+.||+.|++.++.. ++-+. ....+-+..++.
T Consensus 143 ~~K~~~l~~~~-------~~~~~~i~iGDg~~D~~~a~~Ad~~--------------~ar~~l~~~~~~~~~~~~~~~~f 201 (214)
T TIGR03333 143 CCKPSLIRKLS-------EPNDYHIVIGDSVTDVEAAKQSDLC--------------FARDYLLNECEELGLNHAPFQDF 201 (214)
T ss_pred CCHHHHHHHHh-------hcCCcEEEEeCCHHHHHHHHhCCee--------------EehHHHHHHHHHcCCCccCcCCH
Confidence 45777766543 3567899999999999999998752 22221 122344446888
Q ss_pred hHHHHHHHHHH
Q 003042 824 AEVINLLEGLA 834 (854)
Q Consensus 824 ~eV~~~L~~l~ 834 (854)
.+|.+.|+...
T Consensus 202 ~di~~~l~~~~ 212 (214)
T TIGR03333 202 YDVRKELENVK 212 (214)
T ss_pred HHHHHHHHHHh
Confidence 99988887654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=91.64 E-value=20 Score=40.18 Aligned_cols=138 Identities=15% Similarity=0.171 Sum_probs=84.6
Q ss_pred CEEEEEecCcccc-CCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccE
Q 003042 326 KIVILGVDDMDLF-KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (854)
Q Consensus 326 ~~iil~VdRld~~-KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv 404 (854)
+-+++..-|-.-. +++...+.|+.++++++|+.. +| .|..-+ +-+++.. +.+++ -.+-
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----vi---yp~H~~-~~v~e~~----------~~~L~---~~~~ 263 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VI---YPVHPR-PRVRELV----------LKRLK---NVER 263 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EE---EeCCCC-hhhhHHH----------HHHhC---CCCc
Confidence 4566677777665 999999999999999998754 33 222112 2222222 11222 1223
Q ss_pred EEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC-
Q 003042 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS- 483 (854)
Q Consensus 405 ~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~- 483 (854)
+.+-.++...+...|...|-+.+--| |=.--||-.-+. -++++=+.+.=.+.+.
T Consensus 264 v~li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~--------------------Pvl~lR~~TERPE~v~a 318 (383)
T COG0381 264 VKLIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGK--------------------PVLVLRDTTERPEGVEA 318 (383)
T ss_pred EEEeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcCC--------------------cEEeeccCCCCccceec
Confidence 44555799999999999997665544 112234444421 2444445554455553
Q ss_pred C-ceEeCCCCHHHHHHHHHHHhcCCHHH
Q 003042 484 G-AIRVNPWNVDAVADAMDSALQMENQE 510 (854)
Q Consensus 484 ~-ai~vnP~d~~~~A~ai~~aL~m~~~e 510 (854)
| .++|+ .|.+.+.+++.+++++++..
T Consensus 319 gt~~lvg-~~~~~i~~~~~~ll~~~~~~ 345 (383)
T COG0381 319 GTNILVG-TDEENILDAATELLEDEEFY 345 (383)
T ss_pred CceEEeC-ccHHHHHHHHHHHhhChHHH
Confidence 3 35665 57899999999999887654
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=91.55 E-value=0.031 Score=58.64 Aligned_cols=65 Identities=18% Similarity=0.288 Sum_probs=44.3
Q ss_pred cCCeEEEEecCCCCCCCCC-----------------------CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhh
Q 003042 583 TNSRLILLDYDGTVMPQTS-----------------------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNW 639 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~-----------------------~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~ 639 (854)
-+...|+||+|+|+++... .....-+.+++.++.+ .+.|..|+++|||+...-..-
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~-~~~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYA-RSRGVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHH-HHTTEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHH-HHCCCeEEEEecCCchhHHHH
Confidence 4578999999999986110 0112235577888888 899999999999998754444
Q ss_pred hcCCcccce
Q 003042 640 FSGVEKLGL 648 (854)
Q Consensus 640 ~~~~~~l~l 648 (854)
...+...|+
T Consensus 149 ~~nL~~~G~ 157 (229)
T PF03767_consen 149 EKNLKKAGF 157 (229)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHcCC
Confidence 433334443
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=91.41 E-value=0.24 Score=51.48 Aligned_cols=60 Identities=13% Similarity=0.044 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHHhhCC---CCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC----cccceEeCCHh
Q 003042 752 KGIVVKNLISTMRSRG---KSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP----SMAKYYLDDTA 824 (854)
Q Consensus 752 Kg~al~~ll~~l~~~g---i~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~----s~A~y~l~~~~ 824 (854)
+......+++.+ | ++++++++|||+..|+.+.+.+|.. +++|..|... ..+++++++..
T Consensus 139 ~p~~~~~a~~~~---~~~~~~~~~~v~IgDs~~di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~d~vi~~~~ 204 (220)
T PLN02811 139 APDIFLAAARRF---EDGPVDPGKVLVFEDAPSGVEAAKNAGMS-----------VVMVPDPRLDKSYCKGADQVLSSLL 204 (220)
T ss_pred CcHHHHHHHHHh---CCCCCCccceEEEeccHhhHHHHHHCCCe-----------EEEEeCCCCcHhhhhchhhHhcCHh
Confidence 667888888888 6 8999999999999999999999973 5677666421 24566666665
Q ss_pred H
Q 003042 825 E 825 (854)
Q Consensus 825 e 825 (854)
+
T Consensus 205 e 205 (220)
T PLN02811 205 D 205 (220)
T ss_pred h
Confidence 5
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.35 E-value=0.32 Score=51.34 Aligned_cols=65 Identities=11% Similarity=0.028 Sum_probs=47.5
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCC-cccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC--------cccceEeCC
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDD-RSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP--------SMAKYYLDD 822 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs-~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~--------s~A~y~l~~ 822 (854)
+......+++.+ |++++++++|||+ ..|+...+.+|.. ++.|.-+..+ ..+++.+.+
T Consensus 165 ~p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~A~~aG~~-----------~i~v~~~~~~~~~~~~~~~~p~~~i~~ 230 (238)
T PRK10748 165 FSDMYHLAAEKL---NVPIGEILHVGDDLTTDVAGAIRCGMQ-----------ACWINPENGDLMQTWDSRLLPHIEISR 230 (238)
T ss_pred cHHHHHHHHHHc---CCChhHEEEEcCCcHHHHHHHHHCCCe-----------EEEEcCCCccccccccccCCCCEEECC
Confidence 677888888888 9999999999999 5999999999973 2333332221 245667777
Q ss_pred HhHHHHHH
Q 003042 823 TAEVINLL 830 (854)
Q Consensus 823 ~~eV~~~L 830 (854)
..++..+|
T Consensus 231 l~el~~~~ 238 (238)
T PRK10748 231 LASLTSLI 238 (238)
T ss_pred HHHHHhhC
Confidence 77766543
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=90.92 E-value=12 Score=42.34 Aligned_cols=72 Identities=13% Similarity=0.104 Sum_probs=49.0
Q ss_pred EEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-
Q 003042 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL- 482 (854)
Q Consensus 404 v~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l- 482 (854)
.+.+.++++..++.++++.|+++|-.|- =++ .||.+.+. |+|. . |-.++.
T Consensus 263 ~v~l~~~l~~~~~l~Ll~~a~~vitdSS---ggi--~EA~~lg~---------------------Pvv~--l-~~R~e~~ 313 (365)
T TIGR03568 263 NFRLFKSLGQERYLSLLKNADAVIGNSS---SGI--IEAPSFGV---------------------PTIN--I-GTRQKGR 313 (365)
T ss_pred CEEEECCCChHHHHHHHHhCCEEEEcCh---hHH--HhhhhcCC---------------------CEEe--e-cCCchhh
Confidence 4566778999999999999999985441 122 69999833 3331 1 223333
Q ss_pred C-C-c-eEeCCCCHHHHHHHHHHHhc
Q 003042 483 S-G-A-IRVNPWNVDAVADAMDSALQ 505 (854)
Q Consensus 483 ~-~-a-i~vnP~d~~~~A~ai~~aL~ 505 (854)
. | . +.| +.|.+++.+++.+++.
T Consensus 314 ~~g~nvl~v-g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 314 LRADSVIDV-DPDKEEIVKAIEKLLD 338 (365)
T ss_pred hhcCeEEEe-CCCHHHHHHHHHHHhC
Confidence 2 3 3 446 7789999999999653
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=90.90 E-value=0.48 Score=49.75 Aligned_cols=46 Identities=28% Similarity=0.395 Sum_probs=37.9
Q ss_pred eeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
-|.+.-||..++.+++...+.|...+.|++|||+.||......++.
T Consensus 145 C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~ 190 (234)
T PF06888_consen 145 CPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRP 190 (234)
T ss_pred CCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCC
Confidence 3567889999999998754557889999999999999987776543
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=89.82 E-value=38 Score=37.91 Aligned_cols=260 Identities=15% Similarity=0.079 Sum_probs=129.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhh--cCC
Q 003042 171 AYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLL--NSD 248 (854)
Q Consensus 171 ~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll--~~d 248 (854)
..-.+=..|++.+ +..+| |+|.||.=-.-.+..-+-...-++||+..--= -=+.|. +-|.-+|+.|-+. -||
T Consensus 51 ~~~~~~~~~~~~~-~~~~P--d~Vlv~GD~~~~la~alaA~~~~ipv~HieaG-lRs~d~--~~g~~de~~R~~i~~la~ 124 (346)
T PF02350_consen 51 STGLAIIELADVL-EREKP--DAVLVLGDRNEALAAALAAFYLNIPVAHIEAG-LRSGDR--TEGMPDEINRHAIDKLAH 124 (346)
T ss_dssp HHHHHHHHHHHHH-HHHT---SEEEEETTSHHHHHHHHHHHHTT-EEEEES------S-T--TSSTTHHHHHHHHHHH-S
T ss_pred HHHHHHHHHHHHH-HhcCC--CEEEEEcCCchHHHHHHHHHHhCCCEEEecCC-CCcccc--CCCCchhhhhhhhhhhhh
Confidence 3444444555544 44578 89999988887777777666667776533210 000111 1244455555431 266
Q ss_pred eEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEE
Q 003042 249 LIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIV 328 (854)
Q Consensus 249 ligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 328 (854)
+----|..+.++.++ .|.+. ++ +. .+-.+++|.-........+... ...+.....++.+
T Consensus 125 lhf~~t~~~~~~L~~-----~G~~~--~r----I~--------~vG~~~~D~l~~~~~~~~~~~~--~~~i~~~~~~~~i 183 (346)
T PF02350_consen 125 LHFAPTEEARERLLQ-----EGEPP--ER----IF--------VVGNPGIDALLQNKEEIEEKYK--NSGILQDAPKPYI 183 (346)
T ss_dssp EEEESSHHHHHHHHH-----TT--G--GG----EE--------E---HHHHHHHHHHHTTCC-HH--HHHHHHCTTSEEE
T ss_pred hhccCCHHHHHHHHh-----cCCCC--Ce----EE--------EEChHHHHHHHHhHHHHhhhhh--hHHHHhccCCCEE
Confidence 666667777777665 24321 11 11 1234577754333211111110 1122222344455
Q ss_pred EEEecCcccc---CCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEE
Q 003042 329 ILGVDDMDLF---KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIV 405 (854)
Q Consensus 329 il~VdRld~~---KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~ 405 (854)
++..=|.... ......+.+++.+.+. +++. +|....++ + ...+.+.+...+ +..+.
T Consensus 184 Lvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~----vi~~~hn~----p---~~~~~i~~~l~~---------~~~v~ 242 (346)
T PF02350_consen 184 LVTLHPVTNEDNPERLEQILEALKALAER-QNVP----VIFPLHNN----P---RGSDIIIEKLKK---------YDNVR 242 (346)
T ss_dssp EEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEE----EEEE--S-----H---HHHHHHHHHHTT----------TTEE
T ss_pred EEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCc----EEEEecCC----c---hHHHHHHHHhcc---------cCCEE
Confidence 5555454443 3466777788888777 4433 44444221 1 222232222211 11244
Q ss_pred EEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC---
Q 003042 406 IIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL--- 482 (854)
Q Consensus 406 ~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--- 482 (854)
+ ..+++..++.++++.|+++|-.|- | +..||..++. |+|.=...|-.++.
T Consensus 243 ~-~~~l~~~~~l~ll~~a~~vvgdSs--G---I~eEa~~lg~---------------------P~v~iR~~geRqe~r~~ 295 (346)
T PF02350_consen 243 L-IEPLGYEEYLSLLKNADLVVGDSS--G---IQEEAPSLGK---------------------PVVNIRDSGERQEGRER 295 (346)
T ss_dssp E-E----HHHHHHHHHHESEEEESSH--H---HHHHGGGGT-----------------------EEECSSS-S-HHHHHT
T ss_pred E-ECCCCHHHHHHHHhcceEEEEcCc--c---HHHHHHHhCC---------------------eEEEecCCCCCHHHHhh
Confidence 4 447899999999999999987772 2 2338888843 55555555655554
Q ss_pred CCceEeCCCCHHHHHHHHHHHhcC
Q 003042 483 SGAIRVNPWNVDAVADAMDSALQM 506 (854)
Q Consensus 483 ~~ai~vnP~d~~~~A~ai~~aL~m 506 (854)
..+++|. .|.+++.+||.+++..
T Consensus 296 ~~nvlv~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 296 GSNVLVG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp TSEEEET-SSHHHHHHHHHHHHH-
T ss_pred cceEEeC-CCHHHHHHHHHHHHhC
Confidence 3356664 8999999999999976
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=89.80 E-value=1.6 Score=50.43 Aligned_cols=130 Identities=16% Similarity=0.222 Sum_probs=70.5
Q ss_pred ccccCchHHHhhhCCchHHHH--HHHHHHHc---CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 003042 295 PVGIHMGQFESIMSLDVTGQK--VKELKEKF---DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITN 369 (854)
Q Consensus 295 p~GId~~~~~~~~~~~~~~~~--~~~l~~~~---~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~ 369 (854)
.+|.-..+....+...+.... +...|+.| .+..++.+..++ .|=-+..+..+.++|++-|+-+ |++...
T Consensus 249 ~~~~~~~~~~~~~~~g~~~~~~~v~~~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~ 322 (468)
T PF13844_consen 249 QNGLATTQTNNKAATGEEVPQNIVVTTRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRF 322 (468)
T ss_dssp EECCGHHHH-HHHHTTSS--SSEEEEETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEET
T ss_pred ecccchhhhhccccCCccCCccccccCHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeC
Confidence 567776666544333221110 11234555 466666666765 4566889999999999999765 666554
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeee
Q 003042 370 PARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVS 445 (854)
Q Consensus 370 p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~ 445 (854)
+. .+ ++.+.+.+.+ .|. .-.-++| .+..+.+|..+.|+.+|||+-|..+-|- .+.+||+++
T Consensus 323 ~~--~~------~~~l~~~~~~----~Gv-~~~Ri~f-~~~~~~~ehl~~~~~~DI~LDT~p~nG~-TTt~dALwm 383 (468)
T PF13844_consen 323 PA--SG------EARLRRRFAA----HGV-DPDRIIF-SPVAPREEHLRRYQLADICLDTFPYNGG-TTTLDALWM 383 (468)
T ss_dssp ST--TH------HHHHHHHHHH----TTS--GGGEEE-EE---HHHHHHHGGG-SEEE--SSS--S-HHHHHHHHH
T ss_pred CH--HH------HHHHHHHHHH----cCC-ChhhEEE-cCCCCHHHHHHHhhhCCEEeeCCCCCCc-HHHHHHHHc
Confidence 43 11 1223332222 232 2233554 4467889999999999999999877774 477899998
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.87 E-value=3.7 Score=52.19 Aligned_cols=40 Identities=25% Similarity=0.331 Sum_probs=31.0
Q ss_pred eeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+..-.-|+..++.+.+. ..--+++|||+.||..|++.|+.
T Consensus 776 R~sPlQKA~Vv~lVk~~------~~~~TLAIGDGANDVsMIQ~AhV 815 (1151)
T KOG0206|consen 776 RVSPLQKALVVKLVKKG------LKAVTLAIGDGANDVSMIQEAHV 815 (1151)
T ss_pred cCCHHHHHHHHHHHHhc------CCceEEEeeCCCccchheeeCCc
Confidence 33345599898888443 34579999999999999998875
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.94 E-value=1.1 Score=54.78 Aligned_cols=46 Identities=11% Similarity=0.146 Sum_probs=33.0
Q ss_pred CCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCc
Q 003042 604 KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHG 653 (854)
Q Consensus 604 ~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG 653 (854)
..+-+++..+|++| .+.+++.+.|||-.....-...+ +.|++.+.+
T Consensus 704 NkLK~~T~~VI~eL-~~AnIRtVMcTGDNllTaisVak---eCgmi~p~~ 749 (1140)
T KOG0208|consen 704 NKLKEETKRVIDEL-NRANIRTVMCTGDNLLTAISVAK---ECGMIEPQV 749 (1140)
T ss_pred cccccccHHHHHHH-HhhcceEEEEcCCchheeeehhh---cccccCCCC
Confidence 44556777778887 77899999999998877666653 445554444
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=87.82 E-value=0.42 Score=47.56 Aligned_cols=45 Identities=16% Similarity=0.276 Sum_probs=29.7
Q ss_pred eEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhh
Q 003042 741 HIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIE 790 (854)
Q Consensus 741 ~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag 790 (854)
.++||.|. +|-.-.+.|.+.. |++++++++|=|...-.+--+..|
T Consensus 100 ~~~eI~~g--sK~~Hf~~i~~~t---gI~y~eMlFFDDe~~N~~~v~~lG 144 (169)
T PF12689_consen 100 DYLEIYPG--SKTTHFRRIHRKT---GIPYEEMLFFDDESRNIEVVSKLG 144 (169)
T ss_dssp CEEEESSS---HHHHHHHHHHHH------GGGEEEEES-HHHHHHHHTTT
T ss_pred chhheecC--chHHHHHHHHHhc---CCChhHEEEecCchhcceeeEecC
Confidence 34778874 8999999999988 999999999998654444444444
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.14 E-value=0.31 Score=51.45 Aligned_cols=31 Identities=13% Similarity=0.039 Sum_probs=20.6
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHc
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDL 617 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L 617 (854)
++|+|+||+||||++ +...+.....++++.+
T Consensus 9 ~~k~iiFDlDGTL~D---~~~~~~~a~~~~~~~~ 39 (238)
T PRK10748 9 RISALTFDLDDTLYD---NRPVILRTEQEALAFV 39 (238)
T ss_pred CceeEEEcCcccccC---ChHHHHHHHHHHHHHH
Confidence 469999999999999 4443344444444333
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=86.88 E-value=0.57 Score=44.76 Aligned_cols=67 Identities=13% Similarity=0.137 Sum_probs=39.7
Q ss_pred CeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHH-----HHhhcCCeEeecCHHHHHHHHH
Q 003042 192 DYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEIL-----KSLLNSDLIGFHTFDYARHFLS 263 (854)
Q Consensus 192 D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil-----~~ll~~dligf~t~~~~~~Fl~ 263 (854)
|+|++|+++..++..+++++ .++|+.+.+|..+.... .++...++ ..+-.||.|-..+...++.+.+
T Consensus 75 Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 75 DVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred eEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 99999999877777777734 47999999997543221 12222222 3445689988888877776654
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=86.49 E-value=2.4 Score=43.39 Aligned_cols=37 Identities=19% Similarity=0.304 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
|...++.+++.- +++.. ++|+|||.+|.+||+.+...
T Consensus 192 ka~i~e~~~ele---~~d~s-a~~VGDSItDv~ml~~~rgr 228 (315)
T COG4030 192 KAKIMEGYCELE---GIDFS-AVVVGDSITDVKMLEAARGR 228 (315)
T ss_pred hhHHHHHHHhhc---CCCcc-eeEecCcccchHHHHHhhcc
Confidence 666666666653 55444 89999999999999999764
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=86.10 E-value=1.8 Score=46.09 Aligned_cols=58 Identities=14% Similarity=0.269 Sum_probs=44.8
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
....+|+||+|.||++......-..+.+.+.|.+| ++.|..+++=|--+.+-+..-+.
T Consensus 120 ~~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~L-k~~g~vLvLWSyG~~eHV~~sl~ 177 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGDVRIRDPAVYDSLREL-KEQGCVLVLWSYGNREHVRHSLK 177 (297)
T ss_pred CCCcEEEEECCCcccccCCccccCChHHHHHHHHH-HHcCCEEEEecCCCHHHHHHHHH
Confidence 34679999999999983322334679999999999 89998888877777776666653
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.65 E-value=4.8 Score=48.81 Aligned_cols=52 Identities=19% Similarity=0.306 Sum_probs=42.9
Q ss_pred hcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 582 KTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
.....|.|.-+=|-+=| |-+++.++++.+ .+.|+.|..+||-.......+-+
T Consensus 568 ~~E~~LtFvGlVGi~DP-------PR~ev~~ai~~c-~~aGIrV~mITGD~~~TA~AI~r 619 (972)
T KOG0202|consen 568 TAESDLTFVGLVGILDP-------PRPEVADAIELC-RQAGIRVIMITGDNKETAEAIAR 619 (972)
T ss_pred ccccceEEEEEeeccCC-------CchhHHHHHHHH-HHcCCEEEEEcCCCHHHHHHHHH
Confidence 34457888887665544 779999999997 99999999999999999888874
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.39 E-value=0.94 Score=46.22 Aligned_cols=37 Identities=8% Similarity=0.170 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+....+.+++.+ |++|+++++|||+..|+...+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~p~~~l~vgD~~~di~aA~~aG~ 179 (199)
T PRK09456 143 EARIYQHVLQAE---GFSAADAVFFDDNADNIEAANALGI 179 (199)
T ss_pred CHHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHcCC
Confidence 778889999999 9999999999999999999999987
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=84.91 E-value=7.1 Score=43.04 Aligned_cols=141 Identities=18% Similarity=0.193 Sum_probs=86.8
Q ss_pred CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccE
Q 003042 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (854)
Q Consensus 325 ~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv 404 (854)
++..|+-=..=|++-+....|+++.+.+. .+ +.++..- + -+...+++.++|.+...++ ||. ..+
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~~--~~----~kIivPL--s--Yg~~n~~Yi~~V~~~~~~l---F~~---~~~ 247 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQFG--DD----VKIIVPL--S--YGANNQAYIQQVIQAGKEL---FGA---ENF 247 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhcC--CC----eEEEEEC--C--CCCchHHHHHHHHHHHHHh---cCc---cce
Confidence 34444444567888888877777665321 12 2233221 1 2222456777776655553 332 235
Q ss_pred EEEcCCCChhhHHHHHHhCcEEEEccCc-cCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-
Q 003042 405 VIIKEPLSTQDKVPYYAIAECCVVNCVR-DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL- 482 (854)
Q Consensus 405 ~~~~~~~~~~el~aly~~ADv~vv~S~~-EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l- 482 (854)
..+...++.+|+.++++.+|+.++...| .|||..++ .+.+ |.++++|+-.-....+
T Consensus 248 ~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~---------------------G~~v~L~~~np~~~~l~ 305 (360)
T PF07429_consen 248 QILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL---------------------GKKVFLSRDNPFWQDLK 305 (360)
T ss_pred eEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc---------------------CCeEEEecCChHHHHHH
Confidence 5688899999999999999999999975 89987642 2222 4699999988877777
Q ss_pred CCceEe----CCCCHHHHHHHHHHH
Q 003042 483 SGAIRV----NPWNVDAVADAMDSA 503 (854)
Q Consensus 483 ~~ai~v----nP~d~~~~A~ai~~a 503 (854)
+.++.| +.-|...+++|=+++
T Consensus 306 ~~~ipVlf~~d~L~~~~v~ea~rql 330 (360)
T PF07429_consen 306 EQGIPVLFYGDELDEALVREAQRQL 330 (360)
T ss_pred hCCCeEEeccccCCHHHHHHHHHHH
Confidence 335443 334445555544333
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=84.62 E-value=0.97 Score=46.80 Aligned_cols=35 Identities=11% Similarity=0.131 Sum_probs=25.4
Q ss_pred CHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcC
Q 003042 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (854)
Q Consensus 607 s~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 642 (854)
.+.+.+.|+.+ ++.|+.++|+||.....+..++..
T Consensus 72 ~pg~~e~l~~l-~~~g~~~~IvS~~~~~~i~~il~~ 106 (214)
T TIGR03333 72 REGFREFVAFI-NEHGIPFYVISGGMDFFVYPLLEG 106 (214)
T ss_pred cccHHHHHHHH-HHCCCeEEEECCCcHHHHHHHHHh
Confidence 34455667777 677888999999888777777643
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=84.47 E-value=1.1 Score=45.53 Aligned_cols=34 Identities=9% Similarity=-0.017 Sum_probs=25.7
Q ss_pred CHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 607 STEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 607 s~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
.+.+.+.|+.+ ++.|..++|+||.....++.+.+
T Consensus 89 ~~~~~~~l~~l-~~~g~~v~ivS~s~~~~v~~~~~ 122 (202)
T TIGR01490 89 YPEARDLIRWH-KAEGHTIVLVSASLTILVKPLAR 122 (202)
T ss_pred cHHHHHHHHHH-HHCCCEEEEEeCCcHHHHHHHHH
Confidence 45566777777 67888999999888777777664
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=84.10 E-value=0.43 Score=46.82 Aligned_cols=56 Identities=18% Similarity=0.285 Sum_probs=35.3
Q ss_pred eEEEEecCCCCCCCCCCCCC----------------CCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCC
Q 003042 586 RLILLDYDGTVMPQTSEDKR----------------PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV 643 (854)
Q Consensus 586 klI~~DlDGTLl~~~~~~~~----------------is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~ 643 (854)
|++++||||||+........ .-|.+.+.|+.++ +...++|.|..+...+..++..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~--~~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELS--KHYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHH--HHCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHH--HhceEEEEEeehhhhhhHHHHhh
Confidence 68999999999973211100 2355666676662 44889999999888777777544
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=83.89 E-value=1.3 Score=45.03 Aligned_cols=38 Identities=18% Similarity=0.170 Sum_probs=34.9
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
+....+.+++.+ |++|+++++|||+.+|+...+.+|..
T Consensus 150 ~~~~~~~~~~~~---~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 150 APQVYQLALEAL---GVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred CHHHHHHHHHHh---CCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 577889999999 99999999999999999999999973
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=83.72 E-value=1.5 Score=42.69 Aligned_cols=38 Identities=18% Similarity=0.314 Sum_probs=35.3
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
+..+.+.+++.+ |++++++++|||+..|+.+.+.+|..
T Consensus 135 ~~~~~~~~~~~~---~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 135 DPDAYRRALEKL---GIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp SHHHHHHHHHHH---TSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHc---CCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 568899999999 99999999999999999999999973
|
... |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.64 E-value=1.3 Score=43.66 Aligned_cols=72 Identities=18% Similarity=0.271 Sum_probs=54.1
Q ss_pred ccccCHHHHHHHHhhcCCeEEEEecCCCCCCCCC------------------------------CCCCCCHHHHHHHHHc
Q 003042 568 FRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTS------------------------------EDKRPSTEVLSILNDL 617 (854)
Q Consensus 568 f~~l~~~~i~~~y~~~~~klI~~DlDGTLl~~~~------------------------------~~~~is~~~~~aL~~L 617 (854)
....++++|..+....+.-.+-||+|.|++-.++ ..-.|+.++...|-.+
T Consensus 46 ihwiSvaqI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~M 125 (237)
T COG3700 46 IHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDM 125 (237)
T ss_pred eeEEEHHHHHhhhcCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHH
Confidence 4457789999998888888899999999985221 1224667776666666
Q ss_pred ccCCCCeEEEEcCCCccchhhh
Q 003042 618 CNDPKNAVFIVSGRGKDSLGNW 639 (854)
Q Consensus 618 ~~~~g~~v~I~TGR~~~~l~~~ 639 (854)
.+..|-.++++|||+...++..
T Consensus 126 Hq~RGD~i~FvTGRt~gk~d~v 147 (237)
T COG3700 126 HQRRGDAIYFVTGRTPGKTDTV 147 (237)
T ss_pred HHhcCCeEEEEecCCCCccccc
Confidence 6889999999999998755443
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=83.57 E-value=7.8 Score=42.69 Aligned_cols=37 Identities=19% Similarity=0.255 Sum_probs=28.1
Q ss_pred EEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeee
Q 003042 406 IIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (854)
Q Consensus 406 ~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~ 446 (854)
++. .-+..=+.+++..||.++||. |..+++. ||++++
T Consensus 213 ~~~-~~~~nPy~~~La~ad~i~VT~--DSvSMvs-EA~~tG 249 (311)
T PF06258_consen 213 IWD-GTGENPYLGFLAAADAIVVTE--DSVSMVS-EAAATG 249 (311)
T ss_pred Eec-CCCCCcHHHHHHhCCEEEEcC--ccHHHHH-HHHHcC
Confidence 443 344556889999999999997 7788764 998873
|
The function of this family is unknown. |
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=83.45 E-value=2.1 Score=48.61 Aligned_cols=73 Identities=12% Similarity=0.177 Sum_probs=56.6
Q ss_pred CHHHHHHHHhhcCCeEEEEecCCCCCCCC-------------CCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhh
Q 003042 572 GMHHIASAYNKTNSRLILLDYDGTVMPQT-------------SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGN 638 (854)
Q Consensus 572 ~~~~i~~~y~~~~~klI~~DlDGTLl~~~-------------~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~ 638 (854)
.+..++.+-.....|.+++|||+||.... +..+..-.+..+.+..| .++|..++|||=.....+.+
T Consensus 209 ei~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l-~kqGVlLav~SKN~~~da~e 287 (574)
T COG3882 209 EIASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGL-KKQGVLLAVCSKNTEKDAKE 287 (574)
T ss_pred HHHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHH-HhccEEEEEecCCchhhHHH
Confidence 44566666666778999999999999621 01234457788889999 89999999999999999999
Q ss_pred hhcCCcc
Q 003042 639 WFSGVEK 645 (854)
Q Consensus 639 ~~~~~~~ 645 (854)
.|..-|.
T Consensus 288 vF~khp~ 294 (574)
T COG3882 288 VFRKHPD 294 (574)
T ss_pred HHhhCCC
Confidence 9865443
|
|
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.18 E-value=1.6 Score=44.67 Aligned_cols=73 Identities=18% Similarity=0.227 Sum_probs=50.8
Q ss_pred eEEEEeeCCcchHHHHHHHHHHHhhCCCC-CCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecC--CCcccc
Q 003042 741 HIVEVKPQGVSKGIVVKNLISTMRSRGKS-PDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ--KPSMAK 817 (854)
Q Consensus 741 ~~vEI~p~gvsKg~al~~ll~~l~~~gi~-~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~--~~s~A~ 817 (854)
..+-.+| -..|.+..++.. |+. |.++++|-||.+-+.-.+.+|.. +|-+|. +...++
T Consensus 155 ~~~vcKP----~~~afE~a~k~a---gi~~p~~t~FfDDS~~NI~~ak~vGl~-------------tvlv~~~~~~~~~d 214 (244)
T KOG3109|consen 155 KTVVCKP----SEEAFEKAMKVA---GIDSPRNTYFFDDSERNIQTAKEVGLK-------------TVLVGREHKIKGVD 214 (244)
T ss_pred CceeecC----CHHHHHHHHHHh---CCCCcCceEEEcCchhhHHHHHhccce-------------eEEEEeeecccchH
Confidence 4444555 456778888877 998 99999999999999999999973 666664 345566
Q ss_pred eEeCCHhHHHHHHHHH
Q 003042 818 YYLDDTAEVINLLEGL 833 (854)
Q Consensus 818 y~l~~~~eV~~~L~~l 833 (854)
|.+.+.....+.+-.+
T Consensus 215 ~~l~~ih~~k~a~p~l 230 (244)
T KOG3109|consen 215 YALEQIHNNKEALPEL 230 (244)
T ss_pred HHHHHhhchhhhchHH
Confidence 6665444443333333
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=82.49 E-value=1.4 Score=43.76 Aligned_cols=37 Identities=11% Similarity=0.148 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+....+.+++.+ |++++++++|||+..|+.+.+.+|.
T Consensus 142 ~~~~~~~~~~~~---~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 142 DPDIYLLALKKL---GLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred CHHHHHHHHHHc---CCCcceEEEEcCCHHHHHHHHHcCC
Confidence 467888999998 9999999999999999999999986
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=82.18 E-value=2.1 Score=43.64 Aligned_cols=57 Identities=16% Similarity=0.158 Sum_probs=40.5
Q ss_pred cCCeEEEEecCCCCCCCCCCCC----CCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc
Q 003042 583 TNSRLILLDYDGTVMPQTSEDK----RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS 641 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~----~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~ 641 (854)
..+|++++|||+||++..+... -.-|.+.+.|+.+. +...|+|-|..+...+...+.
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~--~~feIvVwTAa~~~ya~~~l~ 79 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAY--EDYDIVIWSATSMKWIEIKMT 79 (195)
T ss_pred CCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHH--hCCEEEEEecCCHHHHHHHHH
Confidence 4569999999999998422111 12366777887773 378899988888777777663
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=81.77 E-value=11 Score=42.56 Aligned_cols=76 Identities=12% Similarity=0.136 Sum_probs=49.3
Q ss_pred EEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcccccc---
Q 003042 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS--- 481 (854)
Q Consensus 405 ~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~--- 481 (854)
+.+.+.+++. .++..||++|.. -|.| +..|+++++. |+|+.-..+-.+.
T Consensus 277 v~~~~~~p~~---~ll~~~~~~I~h---gG~~-t~~Eal~~G~---------------------P~v~~p~~~dq~~~a~ 328 (392)
T TIGR01426 277 VEVRQWVPQL---EILKKADAFITH---GGMN-STMEALFNGV---------------------PMVAVPQGADQPMTAR 328 (392)
T ss_pred eEEeCCCCHH---HHHhhCCEEEEC---CCch-HHHHHHHhCC---------------------CEEecCCcccHHHHHH
Confidence 3455677764 567899998854 4666 6689999843 5555444332211
Q ss_pred -C---CCceEeCC--CCHHHHHHHHHHHhcCCH
Q 003042 482 -L---SGAIRVNP--WNVDAVADAMDSALQMEN 508 (854)
Q Consensus 482 -l---~~ai~vnP--~d~~~~A~ai~~aL~m~~ 508 (854)
+ ..|+.++. .+.++++++|.++|..+.
T Consensus 329 ~l~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~~ 361 (392)
T TIGR01426 329 RIAELGLGRHLPPEEVTAEKLREAVLAVLSDPR 361 (392)
T ss_pred HHHHCCCEEEeccccCCHHHHHHHHHHHhcCHH
Confidence 1 22555553 467899999999998653
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.96 E-value=23 Score=40.08 Aligned_cols=72 Identities=17% Similarity=0.130 Sum_probs=50.2
Q ss_pred hHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC----CC----ce
Q 003042 415 DKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL----SG----AI 486 (854)
Q Consensus 415 el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l----~~----ai 486 (854)
++-.+-+.|.+.|+||.+|..|-+|.|..+.+ -|-|.+..+|...-+ .+ ||
T Consensus 493 DYeeFVRGCHLGVFPSYYEPWGYTPAECTVMG---------------------iPSvtTNlSGFGcfMeehi~d~~ayGI 551 (692)
T KOG3742|consen 493 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG---------------------IPSVTTNLSGFGCFMEEHIEDPQAYGI 551 (692)
T ss_pred CHHHHhccccccccccccCCCCCCchheEEec---------------------cccccccccchhhhHHHHhcCchhceE
Confidence 56678899999999999999999999999983 355666666654333 11 44
Q ss_pred E-eC-----C-CCHHHHHHHHHHHhcCC
Q 003042 487 R-VN-----P-WNVDAVADAMDSALQME 507 (854)
Q Consensus 487 ~-vn-----P-~d~~~~A~ai~~aL~m~ 507 (854)
. |+ | .+++++++-|..-...+
T Consensus 552 YIvDRRfks~deSv~qL~~~m~~F~~qs 579 (692)
T KOG3742|consen 552 YIVDRRFKSPDESVQQLASFMYEFCKQS 579 (692)
T ss_pred EEEecccCChhhHHHHHHHHHHHHHHHH
Confidence 3 32 2 34677787777765433
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=80.43 E-value=1.8 Score=42.77 Aligned_cols=25 Identities=16% Similarity=0.110 Sum_probs=19.3
Q ss_pred CCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 767 GKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 767 gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
|.+++.+++|||+..|..+....+.
T Consensus 109 ~~~~~~vIiVDD~~~~~~~~~~NgI 133 (162)
T TIGR02251 109 GKDLSKVIIIDNSPYSYSLQPDNAI 133 (162)
T ss_pred CCChhhEEEEeCChhhhccCccCEe
Confidence 6778899999999988776665543
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=80.37 E-value=6.5 Score=42.52 Aligned_cols=92 Identities=10% Similarity=0.094 Sum_probs=56.6
Q ss_pred CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccE
Q 003042 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (854)
Q Consensus 325 ~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv 404 (854)
.++|++..|-.|+.+.....++|+.++ .++++ +..|.++.. +.++++++. +.. .+ .+
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~----i~vv~G~~~---~~~~~l~~~----~~~----~~-----~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAES---QINIS----ITLVTGSSN---PNLDELKKF----AKE----YP-----NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhcc---ccCce----EEEEECCCC---cCHHHHHHH----HHh----CC-----CE
Confidence 367999999999988666777777653 22322 333443321 223333333 222 11 13
Q ss_pred EEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeec
Q 003042 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQ 447 (854)
Q Consensus 405 ~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~ 447 (854)
. +.+. .+++..+++.||++|.+ -|.+.+|+++|+.
T Consensus 227 ~-~~~~--~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~ 261 (279)
T TIGR03590 227 I-LFID--VENMAELMNEADLAIGA-----AGSTSWERCCLGL 261 (279)
T ss_pred E-EEeC--HHHHHHHHHHCCEEEEC-----CchHHHHHHHcCC
Confidence 3 3333 46899999999998874 4579999999944
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=80.33 E-value=1.3 Score=45.10 Aligned_cols=28 Identities=21% Similarity=0.450 Sum_probs=20.7
Q ss_pred CCHHHHHHHHHcccCCCCeEEEEcCCCcc
Q 003042 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKD 634 (854)
Q Consensus 606 is~~~~~aL~~L~~~~g~~v~I~TGR~~~ 634 (854)
|-+.+.++|++| .+.|+.++++|+|+..
T Consensus 74 p~~gA~e~l~~L-~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 74 PIPGAVEALKKL-RDKGHEIVIITARPPE 101 (191)
T ss_dssp B-TTHHHHHHHH-HTSTTEEEEEEE-SSS
T ss_pred ccHHHHHHHHHH-HHcCCcEEEEEecCcc
Confidence 446678899999 6788888888888765
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=80.33 E-value=1.6 Score=46.97 Aligned_cols=38 Identities=18% Similarity=0.259 Sum_probs=30.7
Q ss_pred CcchHHHHH-HHHHHHhhCC--CCCCeEEEEeCCcccHHHHHHh
Q 003042 749 GVSKGIVVK-NLISTMRSRG--KSPDFVLCIGDDRSDEDMFESI 789 (854)
Q Consensus 749 gvsKg~al~-~ll~~l~~~g--i~~d~vlaiGDs~ND~~Mf~~a 789 (854)
..+|...+. ...+++ + .++++++++|||.||+.|..-+
T Consensus 190 ~~~K~~~v~~~~~~~~---~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 190 TFNKNHDVALRNTEYF---NQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred ccccHHHHHHHHHHHh---CccCCcceEEEECcChhhhhHhcCC
Confidence 357877666 467777 6 7899999999999999997665
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.26 E-value=9.5 Score=46.86 Aligned_cols=67 Identities=6% Similarity=0.144 Sum_probs=49.7
Q ss_pred HHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhh
Q 003042 573 MHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (854)
Q Consensus 573 ~~~i~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~ 640 (854)
++..++.-.++..-.+.+-+||+|+.--.....+-++...+++.| +..|+.+++.||-.........
T Consensus 691 i~~~~~~~e~~g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~L-k~~Gi~v~mLTGDn~~aA~svA 757 (951)
T KOG0207|consen 691 ILDALTESERKGQTVVYVAVNGQLVGVFALEDQVRPDAALAVAEL-KSMGIKVVMLTGDNDAAARSVA 757 (951)
T ss_pred HHHhhhhHhhcCceEEEEEECCEEEEEEEeccccchhHHHHHHHH-HhcCceEEEEcCCCHHHHHHHH
Confidence 444445555677889999999999852113445667888888888 7889999999998877776665
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 854 | ||||
| 1uqu_A | 482 | Trehalose-6-Phosphate From E. Coli Bound With Udp-G | 6e-53 | ||
| 2wtx_A | 474 | Insight Into The Mechanism Of Enzymatic Glycosyltra | 7e-53 | ||
| 1gz5_A | 456 | Trehalose-6-Phosphate Synthase. Otsa Length = 456 | 3e-51 | ||
| 4f96_B | 497 | Crystal Structure Of Vlde, The Pseudo-Glycosyltrans | 2e-13 | ||
| 3t5t_A | 496 | Vall From Streptomyces Hygroscopicus In Apo Form Le | 2e-13 | ||
| 3t7d_A | 497 | Vall From Streptomyces Hygroscopicus In Complex Wit | 5e-12 | ||
| 1u02_A | 239 | Crystal Structure Of Trehalose-6-Phosphate Phosphat | 7e-06 |
| >pdb|1UQU|A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. Length = 482 | Back alignment and structure |
|
| >pdb|2WTX|A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase Length = 474 | Back alignment and structure |
|
| >pdb|1GZ5|A Chain A, Trehalose-6-Phosphate Synthase. Otsa Length = 456 | Back alignment and structure |
|
| >pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase, In Complex With Gdp Length = 497 | Back alignment and structure |
|
| >pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form Length = 496 | Back alignment and structure |
|
| >pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With Trehalose Length = 497 | Back alignment and structure |
|
| >pdb|1U02|A Chain A, Crystal Structure Of Trehalose-6-Phosphate Phosphatase Related Protein Length = 239 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 854 | |||
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 0.0 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 0.0 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 7e-74 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 3e-11 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 5e-09 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 7e-09 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 9e-09 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 4e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-08 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 6e-07 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 2e-06 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 2e-04 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 2e-04 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 3e-04 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 3e-04 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 5e-04 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 7e-04 |
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Length = 482 | Back alignment and structure |
|---|
Score = 598 bits (1543), Expect = 0.0
Identities = 131/494 (26%), Positives = 225/494 (45%), Gaps = 38/494 (7%)
Query: 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQ 111
R ++V+N++ + + L + + ++ G ++
Sbjct: 3 RLVVVSNRIAPPDEHAASAGG---------LAVGILGALK-AAGGLWFGWSGET--GNED 50
Query: 112 EEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQA 171
+ + + L +YY+ F LWP FHY L L +F R W
Sbjct: 51 QPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWDG 105
Query: 172 YLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIY 231
YL N + ADK++ ++ D D +WIHDYHL+ LRKR ++GFFLH PFP+ EI+
Sbjct: 106 YLRVNALLADKLLPLLQDD-DIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIF 164
Query: 232 RTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSI 291
LP D +L+ L + DL+GF T + FL S + + S + + +G+
Sbjct: 165 NALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHT---AWGKAFRT 221
Query: 292 KILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQL 351
++ P+GI + + + K+ +LK + I V+ +D KG+ +FLA L
Sbjct: 222 EVYPIGIEPKEIAKQAAGPLP-PKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEAL 280
Query: 352 LEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL 411
LE++P GK+ QI +R + QD+ A IN +G+ G+ P+ + +
Sbjct: 281 LEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHF 340
Query: 412 STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVII 471
+ + + ++ +V +RDGMNLV +Y ++ P V++
Sbjct: 341 DRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQD----------------PANPGVLV 384
Query: 472 VSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWA 531
+S+F G + L+ A+ VNP++ D VA A+D AL M E+I RH + I +D+ +W
Sbjct: 385 LSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQ 444
Query: 532 KSIDQDLERACRDH 545
+ DL++
Sbjct: 445 ECFISDLKQIVPRS 458
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 3t7d_A* Length = 496 | Back alignment and structure |
|---|
Score = 545 bits (1406), Expect = 0.0
Identities = 83/505 (16%), Positives = 174/505 (34%), Gaps = 42/505 (8%)
Query: 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVE---IGV 108
+ + + + + + + + + ++ S + E
Sbjct: 4 EIFLASKRAAITYDTDPATGEPRAWLAPGGT-GNVVAEQAGVLNISWIASADSEDDRRAS 62
Query: 109 DDQEEVSTILLEKFKCVPTFL---PADVHKKYYHGFCKHYLWPLFHYMLPLTASHG-ARF 164
+ T+ L + + L V + + + +W +Y
Sbjct: 63 ALNPDGVTMELHSGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSFGSD 122
Query: 165 DRGEWQAYLSANKVFADKVMEVINPDE-DYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHS 223
R W + + FAD +++ +HDY L+ +P+ LR++ + F+H
Sbjct: 123 AREGWADFGRFTRDFADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHI 182
Query: 224 PFPSSEIYRTLP--VRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIG 281
P+PS++ +R LP +R IL +L + IGF + R+FL S + +L + R +
Sbjct: 183 PWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLP-DARIDREAMT 241
Query: 282 LDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGI 341
+++ G ++ +P+G + Q + ++E DG +++ D K
Sbjct: 242 VEWRGHRTRLRTMPLGYSPLTLDG-----RNPQLPEGIEEWADGHRLVVHSGRTDPIKNA 296
Query: 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGY 401
A +L K ++ NP R D + E N G
Sbjct: 297 ERAVRAF--VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELG---- 350
Query: 402 EPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEK 461
V I + + A+ + N DG NL ++ +
Sbjct: 351 SDTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVN--------------- 395
Query: 462 NPPQKKSVIIVSEFIGCSPSLSGAIR-VNPWNVDAVADAMDSALQMENQEKILRHEKHYK 520
++ + +I+SE G + L R VNP+++ A+A+ +AL +++ +
Sbjct: 396 ---ERDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRD 452
Query: 521 YISSHDVAYWAKSIDQDLERACRDH 545
+ W ++ L
Sbjct: 453 AARPWTLEAWVQAQLDGLAADHAAR 477
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 Length = 239 | Back alignment and structure |
|---|
Score = 240 bits (615), Expect = 7e-74
Identities = 55/266 (20%), Positives = 108/266 (40%), Gaps = 32/266 (12%)
Query: 587 LILLDYDGTVMP--QTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE 644
LI LDYDGT++P E+ +LS+++DL + +IV+GR + + + ++
Sbjct: 3 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDL--KERFDTYIVTGRSPEEISRFL-PLD 59
Query: 645 KLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVW 704
+ + HG ++ + + S R + + + G I K A+++
Sbjct: 60 -INMICYHGACSKINGQIVYNNGS-DRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLY 117
Query: 705 HHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMR 764
H +L +E + V G+ I+E++ GV+KG ++++
Sbjct: 118 HLGLMGAD----MKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGE-- 171
Query: 765 SRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTA 824
+ GDD +DE FE+ + A VG+ + AK+++ D
Sbjct: 172 ------RPAIIAGDDATDEAAFEANDDA------------LTIKVGEGETHAKFHVADYI 213
Query: 825 EVINLLEGLATESVHSK-SASYQESH 849
E+ +L+ + V K + H
Sbjct: 214 EMRKILKFIEMLGVQKKQEGHHHHHH 239
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* Length = 262 | Back alignment and structure |
|---|
Score = 63.8 bits (154), Expect = 3e-11
Identities = 38/254 (14%), Positives = 80/254 (31%), Gaps = 41/254 (16%)
Query: 573 MHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRG 632
M A A + L L D DGT+ P ++ EV + L L + + + +V G
Sbjct: 1 MAVTAQAARRKERVLCLFDVDGTLTP---ARQKIDPEVAAFLQKLRS--RVQIGVVGGSD 55
Query: 633 KDSLGNWFSGVEKLGLSAEHGYFTR----WSKNSAWEICSLTRDFD-------WKEIAEP 681
+ +++ ++ + + ++
Sbjct: 56 YCKIAEQLGDGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSY 115
Query: 682 VMKLYTETTDGSFIEDKETAIVWHHQH-----------ADPHFGSCQAKELLDHLENVLA 730
+ L G+FIE + + ++ ++ ++ L+ A
Sbjct: 116 MALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFA 175
Query: 731 NEPVVVKR-GQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRS----DEDM 785
+ + R G +V P+G K + +L S D + G++ S D ++
Sbjct: 176 GKGLRFSRGGMISFDVFPEGWDKRYCLDSL------DQDSFDTIHFFGNETSPGGNDFEI 229
Query: 786 FESIEQ---AVADP 796
F +V P
Sbjct: 230 FADPRTVGHSVVSP 243
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 5e-09
Identities = 38/209 (18%), Positives = 68/209 (32%), Gaps = 35/209 (16%)
Query: 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNA---VFIVSGRGKDSLGNWFSG 642
RL +D DG + T D+ ST+ + + + V ++SG +
Sbjct: 6 RLAAIDVDGNL---TDRDRLISTKAIESIRSA----EKKGLTVSLLSGNVIPVVYALK-- 56
Query: 643 VEKLGLS----AEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDK 698
LG++ E+G + S + S E ++ ++ T I
Sbjct: 57 -IFLGINGPVFGENGGIMFDNDGSIKKFFS-------NEGTNKFLEEMSKRTSMRSILTN 108
Query: 699 ETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKN 758
DP E +D++ + V+ + + +G K V
Sbjct: 109 RWREASTGFDIDP--------EDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNK 160
Query: 759 LISTMRSRGKSPDFVLCIGDDRSDEDMFE 787
L D +L IGD +D MF+
Sbjct: 161 LKEMY---SLEYDEILVIGDSNNDMPMFQ 186
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 Length = 231 | Back alignment and structure |
|---|
Score = 56.3 bits (137), Expect = 7e-09
Identities = 37/209 (17%), Positives = 75/209 (35%), Gaps = 33/209 (15%)
Query: 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNA---VFIVSGRGKDSLGNWFSG 642
+ I +D DGT+ T ++ + L + ++ + +V+G
Sbjct: 4 KAISIDIDGTI---TYPNRMIHEKALEAIRRA----ESLGIPIMLVTGNTVQFAEAAS-- 54
Query: 643 VEKLGLS----AEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDK 698
+G S AE G + K I + D +W + + K + + D+
Sbjct: 55 -ILIGTSGPVVAEDGGAISYKKK---RIFLASMDEEW-ILWNEIRKRFPNARTSYTMPDR 109
Query: 699 ETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKN 758
+V + + +E+++ L N +V + VK ++KG ++
Sbjct: 110 RAGLVIMRETINVE----TVREIINEL-----NLNLVAVDSGFAIHVKKPWINKGSGIEK 160
Query: 759 LISTMRSRGKSPDFVLCIGDDRSDEDMFE 787
+ G P V +GD +D D F+
Sbjct: 161 ASEFL---GIKPKEVAHVGDGENDLDAFK 186
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 Length = 275 | Back alignment and structure |
|---|
Score = 56.6 bits (136), Expect = 9e-09
Identities = 33/233 (14%), Positives = 62/233 (26%), Gaps = 22/233 (9%)
Query: 580 YNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNW 639
++ L+ D DGT++ L L + V + S + +
Sbjct: 4 FSIQQPLLVFSDLDGTLL---DSHSYDWQPAAPWLTRL-REANVPVILCSSKTSAEMLYL 59
Query: 640 FS--GVEKLGLSAEHGYFTRW--SKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFI 695
G++ L L AE+G + + EI+ + L +
Sbjct: 60 QKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHFKFTT 119
Query: 696 EDKETAIVWHHQHADPHFGSCQA--------------KELLDHLENVLANEPVVVKRGQH 741
D + E + L + +G
Sbjct: 120 FDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGAR 179
Query: 742 IVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVA 794
V K +I+T + L +GD +D + E ++ AV
Sbjct: 180 FWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVI 232
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A Length = 246 | Back alignment and structure |
|---|
Score = 54.2 bits (129), Expect = 4e-08
Identities = 36/241 (14%), Positives = 64/241 (26%), Gaps = 39/241 (16%)
Query: 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG- 642
L L D DGT+ T+ ++ + E+ L L K + +V G + +
Sbjct: 5 GPALCLFDVDGTL---TAPRQKITKEMDDFLQKLRQ--KIKIGVVGGSDFEKVQEQLGND 59
Query: 643 --------VEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSF 694
+ GL A +N + + K+ G+F
Sbjct: 60 VVEKYDYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTF 119
Query: 695 IEDKETAIVWHHQHADPHFGSCQAKELLDH------------LENVLANEPVVVKRGQHI 742
IE + + LD + GQ
Sbjct: 120 IEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQIS 179
Query: 743 VEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRS----DEDMFESIE---QAVAD 795
+V P G K ++++ + GD D ++F +V
Sbjct: 180 FDVFPDGWDKRYCLRHV------ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA 233
Query: 796 P 796
P
Sbjct: 234 P 234
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 55.2 bits (132), Expect = 7e-08
Identities = 92/680 (13%), Positives = 200/680 (29%), Gaps = 195/680 (28%)
Query: 65 YYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKC 124
+ + ++ + ++Y +D L + F + V ++ + +EE+ I++
Sbjct: 6 HMDFETGEHQYQY-KDILSVFEDA-FVDNFDCKDV--QDMPKSILSKEEIDHIIMS---- 57
Query: 125 VPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVM 184
V LF +L + E + F ++V+
Sbjct: 58 -----KDAVSGTLR----------LFWTLL----------SKQE-----EMVQKFVEEVL 87
Query: 185 EVINPDEDYVWIHD-YHLMVL-PSFLRKRF-HRVKVGFFLHSPFPSSEIYRTLPVRD--E 239
+Y ++ PS + + + + + + F + R P +
Sbjct: 88 R-----INYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQ 142
Query: 240 ILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTV-------SIK 292
L L + + +LG G+T S K
Sbjct: 143 ALLELRPAKNVLIDG-------------VLG--------------SGKTWVALDVCLSYK 175
Query: 293 IL---PVGIH---MGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFL 346
+ I + S ++ + +++L + D ++ I
Sbjct: 176 VQCKMDFKIFWLNLKNCNSPETVL---EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA 232
Query: 347 AMGQLLEQHPDLRGKVVL--VQITNPAR-----------SSGKDVQDLLSDTNRIAEEIN 393
+ +LL+ P +VL VQ + K V D LS I+
Sbjct: 233 ELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATT--THIS 290
Query: 394 LNFGKPGYEPIVIIKEPLS--------TQDKVPYYAIAECCVVN---------CVRDGMN 436
L+ P E S +P E N +RDG+
Sbjct: 291 LDHHSMTLTP----DEVKSLLLKYLDCRPQDLP----REVLTTNPRRLSIIAESIRDGLA 342
Query: 437 LV-PYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS--PSLSGAIRVN-P-- 490
+K+ + + +++ +L + P + + + F S P + P
Sbjct: 343 TWDNWKHVNCDKLTTIIESSL--NVLEPAEYRKM-----FDRLSVFPP-----SAHIPTI 390
Query: 491 -----WNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAK---SIDQDLERAC 542
W +D M ++ + + K S + K + L R+
Sbjct: 391 LLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTI-SIPSIYLELKVKLENEYALHRSI 449
Query: 543 RDHL-FKRCWGVGLGLGFRIVALGPE------FRKLGMHHIASA--YNKTNS-RLILLDY 592
DH + + L P + +G HH+ + + R++ LD+
Sbjct: 450 VDHYNIPKTFDSD--------DLIPPYLDQYFYSHIG-HHLKNIEHPERMTLFRMVFLDF 500
Query: 593 ---DGTVMPQTSEDKRPSTEVLSILNDLC--------NDPKNAVFI------VSGRGKDS 635
+ + ++ + +L+ L L NDPK + + ++
Sbjct: 501 RFLEQKIRHDSTAWNASGS-ILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENL 559
Query: 636 LGNWFSGVEKLGLSAEHGYF 655
+ + ++ + ++ L AE
Sbjct: 560 ICSKYTDLLRIALMAEDEAI 579
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} Length = 289 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 6e-07
Identities = 30/234 (12%), Positives = 77/234 (32%), Gaps = 32/234 (13%)
Query: 587 LILLDYDGTVMPQTSEDKRPST--EVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE 644
++ D+D T P T ++++ E+ L D + + V+G +S+ +
Sbjct: 24 IVFCDFDETYFPHTIDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESI---LDKMG 80
Query: 645 KLGLSAEHGYF--------TRWSKNSAWEICS-----LTRDFDWKEIAEPVMKLYTETTD 691
+ + T +S+++ + + + F +++ + V +L+
Sbjct: 81 RGKFRYFPHFIASDLGTEITYFSEHNFGQQDNKWNSRINEGFSKEKVEKLVKQLHENHNI 140
Query: 692 GSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLA-----------NEPVVVKRGQ 740
+ + + H K+ L +E + N
Sbjct: 141 LLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDS 200
Query: 741 HIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVA 794
+ V+ P G K +V + + + + + GD +D M +++
Sbjct: 201 YDVDFIPIGTGKNEIVTFM---LEKYNLNTERAIAFGDSGNDVRMLQTVGNGYL 251
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* Length = 244 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 35/220 (15%), Positives = 69/220 (31%), Gaps = 32/220 (14%)
Query: 586 RLILLDYDGTVMPQTSEDKRPST-EVLSILNDLCNDPKNAVF-IVSGRGKDSLGNWFSGV 643
L++ D D T + + + N +GR S
Sbjct: 4 LLLISDLDNTW---VGDQQALEHLQEYLGDRR-----GNFYLAYATGRSYHSARELQ--- 52
Query: 644 EKLGLSAEHGYFTR-----WSKNSAWEICSLTRDFDW-KEIAEPVMKLYTETTDGSFIED 697
+++GL + T + + + W ++I + + + S +E
Sbjct: 53 KQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGFEALKPQSPLEQ 112
Query: 698 KETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPV---VVKRGQHIVEVKPQGVSKGI 754
I +H ++D L +L + V+ V++ PQ +KG
Sbjct: 113 NPWKISYHLDPQA-------CPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGN 165
Query: 755 VVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVA 794
+ L + P L GD +D +FE+ + V
Sbjct: 166 ATQYL---QQHLAMEPSQTLVCGDSGNDIGLFETSARGVI 202
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A Length = 249 | Back alignment and structure |
|---|
Score = 42.9 bits (100), Expect = 2e-04
Identities = 38/227 (16%), Positives = 67/227 (29%), Gaps = 27/227 (11%)
Query: 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE- 644
RLI LD D T++P D P+ ++ L D+ + S + + + +E
Sbjct: 3 RLIFLDIDKTLIPGYEPD--PAKPIIEELKDM----GFEIIFNSSKTRAEQEYYRKELEV 56
Query: 645 KLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEI-----------------AEPVMKLYT 687
+ +E+G K ++ I +K Y
Sbjct: 57 ETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYYG 116
Query: 688 ETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKP 747
+T + + + + D E VL V G V
Sbjct: 117 NSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGWEEVLVEGGFKVTMGSRFYTV-H 175
Query: 748 QGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVA 794
KG K L+ + +GD +D MFE +++
Sbjct: 176 GNSDKGKAAKILLDFYK--RLGQIESYAVGDSYNDFPMFEVVDKVFI 220
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* Length = 259 | Back alignment and structure |
|---|
Score = 42.7 bits (100), Expect = 2e-04
Identities = 36/232 (15%), Positives = 71/232 (30%), Gaps = 39/232 (16%)
Query: 587 LILLDYDGTVMPQTSEDKR--PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE 644
++ D DGT++ E P+ E L L L V V+ + VE
Sbjct: 2 IVFTDLDGTLL---DERGELGPAREALERLRAL----GVPVVPVTAKT-------RKEVE 47
Query: 645 KLGLS----AEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYT------ETTDGSF 694
LGL E+G ++ + +A P K+
Sbjct: 48 ALGLEPPFIVENGGGLYLPRDWPVRAGRPKGGYRVVSLAWPYRKVRARLREAEALAGRPI 107
Query: 695 IEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHI------------ 742
+ + + + + + ++ E ++ V + +
Sbjct: 108 LGYGDLTAEAVARLTGLSREAARRAKAREYDETLVLCPEEVEAVLEALEAVGLEWTHGGR 167
Query: 743 VEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVA 794
+G KG V L + + F + +GD +D +F +++ AV
Sbjct: 168 FYHAAKGADKGRAVARLRALWP-DPEEARFAVGLGDSLNDLPLFRAVDLAVY 218
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A Length = 279 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 3e-04
Identities = 38/242 (15%), Positives = 78/242 (32%), Gaps = 57/242 (23%)
Query: 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNA---VFIVSGRGKDSLGNWFSG 642
+LI+LD DGT+ T+ K S+ L + + + + SGR G
Sbjct: 6 KLIVLDLDGTL---TNSKKEISSRNRETLIRI----QEQGIRLVLASGRP-------TYG 51
Query: 643 V----EKLGLSAEHGY-------------------FTRWSKNSAWEICSLTRDFDWKEIA 679
+ +L ++ G+ + R +
Sbjct: 52 IVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYECARTNHLSILT 111
Query: 680 EPVMKLYTETTDGSFIED-----KETAIVWHHQHADPHFGSCQA---------KELLDHL 725
++ TE + +++ K + D + + L
Sbjct: 112 YDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESEL 171
Query: 726 ENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDM 785
L + V + + +E+ PQG+ K + + L+ + G + + V+ IGD +D M
Sbjct: 172 CIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENI---GMTREEVIAIGDGYNDLSM 228
Query: 786 FE 787
+
Sbjct: 229 IK 230
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} PDB: 2i54_A* 2i55_A* Length = 246 | Back alignment and structure |
|---|
Score = 42.2 bits (98), Expect = 3e-04
Identities = 30/195 (15%), Positives = 54/195 (27%), Gaps = 25/195 (12%)
Query: 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEK 645
L+L D DGT+ T + E+ +++ V V G
Sbjct: 5 VLLLFDVDGTL---TPPRLCQTDEMRALIKRA-RGAGFCVGTVGGSDFAKQVEQLGRDVL 60
Query: 646 L---------GLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIE 696
GL A ++ + + K+ + L G+F+E
Sbjct: 61 TQFDYVFAENGLLAYRNGLEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVE 120
Query: 697 DKETAIVWHHQHADPHFGSCQAKELLDHLENVLAN------------EPVVVKRGQHIVE 744
+ I + E+ D+ V A+ GQ +
Sbjct: 121 YRNGMINVSPIGRNCSQAERDEFEVYDNEHRVRASLIAELENSFPDFGLKYSIGGQISFD 180
Query: 745 VKPQGVSKGIVVKNL 759
V P G K ++ +
Sbjct: 181 VFPVGWDKTYCLQFV 195
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 Length = 282 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 5e-04
Identities = 46/243 (18%), Positives = 85/243 (34%), Gaps = 58/243 (23%)
Query: 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNA---VFIVSGRGKDSLGNWFSG 642
+LI +D DGT+ D S V + + + V + +GR ++G
Sbjct: 6 KLIAIDMDGTL---LLPDHTISPAVKNAIAAA----RARGVNVVLTTGRP-------YAG 51
Query: 643 V----EKLGLSAEHGY-------------------FTRWSKNSAWEICSLTRDFDWKEIA 679
V ++L + Y T S + + L+R+ A
Sbjct: 52 VHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHA 111
Query: 680 EPVMKLYTETTDGSFIEDKETAIVWHHQH------ADPHFGSCQA---------KELLDH 724
LYT D S+ E+ + DP+ + + +
Sbjct: 112 LDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIAR 171
Query: 725 LENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDED 784
+ + + V+K + +E+ + V+KG VK+L + G P+ ++ IGD +D
Sbjct: 172 IPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVL---GIKPEEIMAIGDQENDIA 228
Query: 785 MFE 787
M E
Sbjct: 229 MIE 231
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 Length = 301 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 7e-04
Identities = 33/254 (12%), Positives = 76/254 (29%), Gaps = 66/254 (25%)
Query: 581 NKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNA---VFIVSGRGKDSLG 637
+ +L+L+D+DGT+ +D + +E + + + V I +GR K +
Sbjct: 23 KGADIKLLLIDFDGTLF--VDKDIKVPSENIDAIKEA----IEKGYMVSICTGRSKVGIL 76
Query: 638 NWFSGVEKLGLSAEHGYFTRWSKNSAWEIC---SLTRDFDWKEIAEPVMK---------- 684
+ F + L + Y + ++ D + + ++
Sbjct: 77 SAF---GEENLKKMNFY-------GMPGVYINGTIVYDQIGYTLLDETIETDVYAELISY 126
Query: 685 ---------LYTETTDGSFIEDKETAIVWHHQHA---------------DPHFGSC---- 716
+ +++ + + +
Sbjct: 127 LVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLMIVL 186
Query: 717 ---QAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFV 773
++K ++ +L+ N+ + EV G K + L+ S D V
Sbjct: 187 DPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHY---NISNDQV 243
Query: 774 LCIGDDRSDEDMFE 787
L +GD +D M
Sbjct: 244 LVVGDAENDIAMLS 257
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 854 | |||
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 100.0 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 100.0 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 99.94 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.94 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.93 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.93 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.93 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.92 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.92 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.92 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.91 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.91 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.91 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.91 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.91 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.9 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.9 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 99.9 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 99.89 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.89 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.89 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.89 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.88 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.88 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 99.88 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.88 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.88 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.88 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.88 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.88 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.88 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.88 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.87 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.87 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.87 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.86 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.86 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.85 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.84 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.84 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.8 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.8 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.78 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.75 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.74 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.7 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.68 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.68 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.68 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.62 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.56 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.53 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.52 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.51 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.48 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.48 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.42 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.41 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.4 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.4 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.39 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.37 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.27 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.23 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.23 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.22 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.21 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.2 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.18 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.18 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.16 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.15 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.11 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.11 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.11 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.1 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.09 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.09 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.09 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.08 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.08 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.07 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.07 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.05 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.03 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.03 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.02 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.02 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.01 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.01 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.0 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 98.99 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.99 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 98.96 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.96 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.95 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 98.94 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.94 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.92 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 98.92 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.91 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.91 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.91 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.9 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.9 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 98.9 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.89 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 98.88 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.86 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.85 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.85 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.84 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 98.83 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.83 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.82 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 98.82 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.82 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 98.81 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.81 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.8 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 98.79 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.77 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.76 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.75 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 98.75 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.75 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.75 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.74 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.72 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.71 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 98.69 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 98.64 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 98.62 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 98.61 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 98.6 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 98.51 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.5 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.49 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 98.48 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.46 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 98.46 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.42 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.4 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 98.37 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.34 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 98.3 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.23 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.21 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 98.21 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 98.2 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 98.2 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 98.19 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.16 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 98.16 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.13 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.12 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 98.11 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 98.0 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 97.96 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 97.89 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 97.87 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 97.87 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 97.87 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 97.85 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 97.84 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 97.83 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 97.68 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 97.67 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 97.62 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 97.43 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 97.36 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 97.34 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 97.31 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 97.25 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 97.21 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 97.09 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 97.06 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 96.13 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 97.04 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 96.83 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 96.78 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 96.67 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 96.64 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.27 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 96.13 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 95.8 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 95.19 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 95.11 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 95.04 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 94.9 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 94.82 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 94.75 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 94.31 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 93.55 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 92.12 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 91.83 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 91.64 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 91.4 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 90.19 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 89.83 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 88.05 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 87.52 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 87.44 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 86.77 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 86.42 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 86.0 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 85.05 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 84.53 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 81.36 |
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-107 Score=930.23 Aligned_cols=457 Identities=17% Similarity=0.268 Sum_probs=405.5
Q ss_pred CCcEEEEEcCCccceEEeCCCCce---EEEecCCchhhhhhccCCCCCCeEEEecCCcccCCcchhhHHH---------h
Q 003042 50 CQRRIIVANQLPVKAYYEKDSNKW---GFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVST---------I 117 (854)
Q Consensus 50 ~~~~iivsnrlP~~~~~~~~~~~~---~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~---------~ 117 (854)
..++||||||||+.+++++++|+| .++.++|||+++|.+.+ +++||||.+.+.+. +.+.+ .
T Consensus 2 ~~~livvsnR~P~~~~~~~~~g~~~~~~~~~s~GGLv~al~~~~----~~~Wvgw~~~~~~~---~~~~~~~~~~~~~~~ 74 (496)
T 3t5t_A 2 GSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVVAEQAGVL----NISWIASADSEDDR---RASALNPDGVTMELH 74 (496)
T ss_dssp --CEEEEESCCCEEEEECTTTCSEEEEECSSHHHHHHHHHHHHH----TCCEEEECCSHHHH---HHHHHCTTCEEEECT
T ss_pred CCCEEEEECCCCeeEEEecCCCceeeeeeccCCCchHHHHhhhc----CCEEEecCCCccch---hhhhccccccccccc
Confidence 468999999999999987334566 67788999999997754 78999999865321 11111 1
Q ss_pred hhcCeeEEEEeCChhhhhhhhcccccccccccccccCCC--CCCCCCccChhcHHHHHHHHHHHHHHHHHhcCC-CCCeE
Q 003042 118 LLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPL--TASHGARFDRGEWQAYLSANKVFADKVMEVINP-DEDYV 194 (854)
Q Consensus 118 ~~~~~~~~pv~l~~~~~~~~y~gf~~~~lwp~~H~~~~~--~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~~D~v 194 (854)
..++|+|+||+|++++++.||+||||++|||+|||+++. .|+. .+|+++.|++|++||++||++|++.+++ ++|+|
T Consensus 75 ~~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPl~H~~~~~~~~p~~-~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~~D~V 153 (496)
T 3t5t_A 75 SGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSF-GSDAREGWADFGRFTRDFADAILKSSAQSADPVY 153 (496)
T ss_dssp TSCEEEEEEECCCHHHHHHHHHHHSTTTHHHHHTTCCCSSSCCCB-CHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSCEE
T ss_pred cCCCeEEEEEeCCHHHHHHHHHHhHhhhcchhhccccccCCCCcc-chhhHHHHHHHHHHHHHHHHHHHHHhccCCCCEE
Confidence 246899999999999999999999999999999998543 2322 3566789999999999999999999942 36999
Q ss_pred EEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCC--ChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhh-Cc
Q 003042 195 WIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLP--VRDEILKSLLNSDLIGFHTFDYARHFLSSCSRML-GL 271 (854)
Q Consensus 195 wihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp--~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l-g~ 271 (854)
||||||||+||+|||+++|+++||||||||||++|+|++|| ||++|++|||+||+|||||++|++||++||+|+| |+
T Consensus 154 wVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~ 233 (496)
T 3t5t_A 154 LVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDA 233 (496)
T ss_dssp EEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTC
T ss_pred EEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999 7999999999999999999999999999999999 98
Q ss_pred cccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHH
Q 003042 272 NYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQL 351 (854)
Q Consensus 272 ~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~l 351 (854)
++....+ .++++|++++|.++|+|||++.|.+... +. .++++++++++++||+|||+|+.||+..+|+|| +|
T Consensus 234 ~~~~~~~--~v~~~gr~v~v~viP~GID~~~f~~~~~--~~---~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Af-~l 305 (496)
T 3t5t_A 234 RIDREAM--TVEWRGHRTRLRTMPLGYSPLTLDGRNP--QL---PEGIEEWADGHRLVVHSGRTDPIKNAERAVRAF-VL 305 (496)
T ss_dssp EEETTTT--EEEETTEEEEEEECCCCBCGGGC----C--CC---CTTHHHHHTTSEEEEEEEESSGGGCHHHHHHHH-HH
T ss_pred cccccCC--eEEECCEEEEEEEeccEeCHHHhchhhH--HH---HHHHHHHhCCceEEEEcccCccccCHHHHHHHH-HH
Confidence 8765554 5899999999999999999999986543 11 156788888999999999999999999999999 99
Q ss_pred HHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccC
Q 003042 352 LEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCV 431 (854)
Q Consensus 352 l~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~ 431 (854)
++++|+++ +++|||||.|+|+++++|+++++++++++++||.+||+. ||+|+ +.++.+|+.++|++|||||+||+
T Consensus 306 l~~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~---~V~f~-g~v~~~el~aly~~ADv~vv~Sl 380 (496)
T 3t5t_A 306 AARGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD---TVRID-NDNDVNHTIACFRRADLLIFNST 380 (496)
T ss_dssp HHHTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT---SEEEE-ECCCHHHHHHHHHHCSEEEECCS
T ss_pred HHhCcccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc---CEEEe-CCCCHHHHHHHHHhccEEEECcc
Confidence 99999999 999999999999999999999999999999999999876 78766 46899999999999999999999
Q ss_pred ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-CCceEeCCCCHHHHHHHHHHHhcCCHHH
Q 003042 432 RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSALQMENQE 510 (854)
Q Consensus 432 ~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ai~~aL~m~~~e 510 (854)
+||||||++|||||+. ++||+|+|+++|++++| ++|++|||||++++|+||.++|+|+++|
T Consensus 381 rEGfgLv~~EamA~~~------------------~~g~lVlSe~aGa~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~e 442 (496)
T 3t5t_A 381 VDGQNLSTFEAPLVNE------------------RDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQ 442 (496)
T ss_dssp SBSCCSHHHHHHHHCS------------------SCCEEEEETTBTTHHHHGGGSEEECTTBHHHHHHHHHHHHHCCHHH
T ss_pred cccCChhHHHHHHhCC------------------CCCCEEEeCCCCCHHHhCCCEEEECCCCHHHHHHHHHHHHcCCHHH
Confidence 9999999999999953 36899999999999999 5799999999999999999999999999
Q ss_pred HHHHHHHHhccccccChHHHHHHHHHHHHHHHHhc
Q 003042 511 KILRHEKHYKYISSHDVAYWAKSIDQDLERACRDH 545 (854)
Q Consensus 511 r~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 545 (854)
|+.|+++++++|.+||+.+|+++|+++|..+...+
T Consensus 443 r~~r~~~~~~~V~~~d~~~W~~~fl~~L~~~~~~~ 477 (496)
T 3t5t_A 443 RAEAAARRRDAARPWTLEAWVQAQLDGLAADHAAR 477 (496)
T ss_dssp HHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHhhcccch
Confidence 99999999999999999999999999999876553
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-92 Score=815.09 Aligned_cols=453 Identities=28% Similarity=0.531 Sum_probs=413.0
Q ss_pred CcEEEEEcCCccceEEeCCCCceEEEecCCchhhhhhccCCCCCCeEEEecCCcccCCcchhhHHHhhhcCeeEEEEeCC
Q 003042 51 QRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFLP 130 (854)
Q Consensus 51 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~ 130 (854)
+|+||||||||+.. + + +.++|||+++|.+.+. ..+++||||+|.. ++ +++.+.+.+.++|+|+||||+
T Consensus 2 ~~livvsnr~p~~~----~---~--~~~~ggl~~~l~~~~~-~~~~~wvgw~g~~-~~-~~~~~~~~~~~~~~~~~v~l~ 69 (482)
T 1uqt_A 2 SRLVVVSNRIAPPD----E---H--AASAGGLAVGILGALK-AAGGLWFGWSGET-GN-EDQPLKKVKKGNITWASFNLS 69 (482)
T ss_dssp CCEEEEEEECCCCC-------------CCCHHHHHHHHHHH-HHCEEEEEEEEEE-SC-CSSCCEEEEETTEEEEEEEEC
T ss_pred CCEEEEECCCCCCC----C---C--CcCCCcHHHHHHHHHh-hCCCEEEeCCCCC-Cc-ccchhhhhccCCceEEEEECC
Confidence 58999999999972 1 1 3577899999987664 5799999999865 32 223333344578999999999
Q ss_pred hhhhhhhhcccccccccccccccCCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHh
Q 003042 131 ADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRK 210 (854)
Q Consensus 131 ~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~ 210 (854)
+++++.||+||||++|||+|||+++. ..|+++.|++|++||+.||+++.+.+++ +|+|||||||++++|.++|+
T Consensus 70 ~~~~~~~y~gf~~~~lWp~~H~~~~~-----~~~~~~~w~~y~~vN~~fa~~l~~~~~~-~DiV~vHdyhl~~l~~~lr~ 143 (482)
T 1uqt_A 70 EQDLDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWDGYLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELRK 143 (482)
T ss_dssp HHHHHHHTTTHHHHTHHHHHTTCGGG-----CCCCHHHHHHHHHHHHHHHHHHGGGCCT-TCEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHHHhhhhhccccccCcCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEECchHHHHHHHHHH
Confidence 99999999999999999999999865 4899999999999999999999999987 49999999999999999999
Q ss_pred ccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEE
Q 003042 211 RFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVS 290 (854)
Q Consensus 211 ~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~ 290 (854)
+.++++|+||+|+|||++++|+++|++++|+++|+++|+||||+++|+++|+++|+++++.+.... + .+.++|+.++
T Consensus 144 ~~~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~-~--~~~~~g~~~~ 220 (482)
T 1uqt_A 144 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSA-K--SHTAWGKAFR 220 (482)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETT-T--EEEETTEEEE
T ss_pred hCCCCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccC-C--eEEECCeEEE
Confidence 999999999999999999999999999999999999999999999999999999999999876543 3 3678899999
Q ss_pred EEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 003042 291 IKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNP 370 (854)
Q Consensus 291 i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p 370 (854)
|.++|+|||++.|.+....++..+ ..++|++++++++|++|||+++.||+..+|+||++|++++|+++++++|||||.|
T Consensus 221 v~vip~GID~~~f~~~~~~~~~~~-~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p 299 (482)
T 1uqt_A 221 TEVYPIGIEPKEIAKQAAGPLPPK-LAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 299 (482)
T ss_dssp EEECCCCCCHHHHHHHHHSCCCHH-HHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCB
T ss_pred EEEEeccCCHHHHHHHhcCcchHH-HHHHHHHhCCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECC
Confidence 999999999999987655555544 6778899999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCC
Q 003042 371 ARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSP 450 (854)
Q Consensus 371 ~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~ 450 (854)
+++++++|+++++++++++++||.+||..+|.||+++.+.++++++.++|++|||||+||++||||||++|||||+.+
T Consensus 300 ~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~-- 377 (482)
T 1uqt_A 300 SRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP-- 377 (482)
T ss_dssp CSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCT--
T ss_pred CccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999752
Q ss_pred ccccccCCCCCCCCCCCceEEEecCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHH
Q 003042 451 VLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYW 530 (854)
Q Consensus 451 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W 530 (854)
.++||+|+|+++|+++++.+|++|||+|++++|+||.++|+|++++|+.+++++++++.++|+..|
T Consensus 378 --------------~~~gpvV~S~~~G~~~~l~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~ 443 (482)
T 1uqt_A 378 --------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHW 443 (482)
T ss_dssp --------------TSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred --------------CCCCCEEEECCCCCHHHhCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHH
Confidence 235899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 003042 531 AKSIDQDLERA 541 (854)
Q Consensus 531 ~~~~l~~l~~~ 541 (854)
+++|++.++++
T Consensus 444 a~~~l~~l~~~ 454 (482)
T 1uqt_A 444 QECFISDLKQI 454 (482)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHhc
Confidence 99999999876
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-26 Score=244.24 Aligned_cols=220 Identities=22% Similarity=0.375 Sum_probs=162.2
Q ss_pred CeEEEEecCCCCCCCCC--CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCc
Q 003042 585 SRLILLDYDGTVMPQTS--EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNS 662 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~--~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~ 662 (854)
+|+|++||||||++... ..+.++++++++|++| ++.| .|+|+|||++..+..++..+ ++++++||++|+.++..
T Consensus 1 ikli~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l-~~~g-~v~iaTGR~~~~~~~~~~~l--~~~I~~nGa~i~~~~~~ 76 (239)
T 1u02_A 1 MSLIFLDYDGTLVPIIMNPEESYADAGLLSLISDL-KERF-DTYIVTGRSPEEISRFLPLD--INMICYHGACSKINGQI 76 (239)
T ss_dssp -CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHH-HHHS-EEEEECSSCHHHHHHHSCSS--CEEEEGGGTEEEETTEE
T ss_pred CeEEEEecCCCCcCCCCCcccCCCCHHHHHHHHHH-hcCC-CEEEEeCCCHHHHHHHhccc--hheEEECCEEEeeCCee
Confidence 58999999999998321 2457999999999999 7889 99999999999999999776 68999999999884433
Q ss_pred ceEEc-cccccchH-HHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcC
Q 003042 663 AWEIC-SLTRDFDW-KEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQ 740 (854)
Q Consensus 663 ~~~~~-~~~~~~~~-~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~ 740 (854)
.|... +. ...+ .+.++.+++... ..++.+++.++..+.++|+..++ +.....+++.+.+.+. .+ +.+.++.
T Consensus 77 ~~~~~~~~--~~~l~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~-~~--~~~~~~~ 149 (239)
T 1u02_A 77 VYNNGSDR--FLGVFDRIYEDTRSWVS-DFPGLRIYRKNLAVLYHLGLMGA-DMKPKLRSRIEEIARI-FG--VETYYGK 149 (239)
T ss_dssp EECTTGGG--GHHHHHHHHHHHTTHHH-HSTTCEEEEETTEEEEECTTSCS-TTHHHHHHHHHHHHHH-HT--CEEEECS
T ss_pred eecccccc--cchhhHHHHHHHHHHHh-hCCCcEEEecCCEEEEEcCCCCh-hHHHHHHHHHHHHhcc-CC--cEEEeCC
Confidence 22100 00 1111 123334443332 23566777777777777776532 1111223333334332 22 3467889
Q ss_pred eEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHh--hhhcCCCCCCCCccEEEEEecCCCcccce
Q 003042 741 HIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESI--EQAVADPSVPGIAEVFACTVGQKPSMAKY 818 (854)
Q Consensus 741 ~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~a--g~~~~~~~~~~~~~~~aV~vG~~~s~A~y 818 (854)
.++||+|+++|||.|++++++++ | ++||||+.||++||+.+ | ++|+||++++.|+|
T Consensus 150 ~~lei~~~~~~Kg~al~~l~~~~---g-----via~GD~~ND~~Ml~~a~~g--------------~~vam~Na~~~A~~ 207 (239)
T 1u02_A 150 MIIELRVPGVNKGSAIRSVRGER---P-----AIIAGDDATDEAAFEANDDA--------------LTIKVGEGETHAKF 207 (239)
T ss_dssp SEEEEECTTCCHHHHHHHHHTTS---C-----EEEEESSHHHHHHHHTTTTS--------------EEEEESSSCCCCSE
T ss_pred cEEEEEcCCCCHHHHHHHHHhhC---C-----eEEEeCCCccHHHHHHhhCC--------------cEEEECCCCCcceE
Confidence 99999999999999999999987 6 99999999999999999 7 48999999999999
Q ss_pred EeCC---HhHHHHHHHHHHhcc
Q 003042 819 YLDD---TAEVINLLEGLATES 837 (854)
Q Consensus 819 ~l~~---~~eV~~~L~~l~~~~ 837 (854)
++.+ .++|+++|+++....
T Consensus 208 v~~~~~~~~gV~~~l~~~~~~~ 229 (239)
T 1u02_A 208 HVADYIEMRKILKFIEMLGVQK 229 (239)
T ss_dssp EESSHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHHHhc
Confidence 9988 889999999987543
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-26 Score=247.54 Aligned_cols=233 Identities=22% Similarity=0.255 Sum_probs=162.2
Q ss_pred HHHhhcCCeEEEEecCCCCCCCCCCCC-CCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEE
Q 003042 578 SAYNKTNSRLILLDYDGTVMPQTSEDK-RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYF 655 (854)
Q Consensus 578 ~~y~~~~~klI~~DlDGTLl~~~~~~~-~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~ 655 (854)
+.|..+++|+|+|||||||++ +.+ .++++++++|+++ +++|+.|++||||+...+..++..+. ..++++.||+.
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~---~~~~~i~~~~~~al~~l-~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~ 89 (283)
T 3dao_A 14 NLYFQGMIKLIATDIDGTLVK---DGSLLIDPEYMSVIDRL-IDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTV 89 (283)
T ss_dssp -----CCCCEEEECCBTTTBS---TTCSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTE
T ss_pred hhhhccCceEEEEeCcCCCCC---CCCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcE
Confidence 578999999999999999999 777 8999999999999 88999999999999999999887653 45789999999
Q ss_pred EEECCCcceEEccccccchHHHHHHHHHHHH------hccCCcceEecccce----------EEEe----eccCC-Cc--
Q 003042 656 TRWSKNSAWEICSLTRDFDWKEIAEPVMKLY------TETTDGSFIEDKETA----------IVWH----HQHAD-PH-- 712 (854)
Q Consensus 656 I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y------~~~~~g~~ie~k~~~----------l~~~----~~~~d-~~-- 712 (854)
+...+...+...++.. .+.+.+..+.+.+ .....+.+....... .... +.... ..
T Consensus 90 i~~~~~~i~~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 167 (283)
T 3dao_A 90 VRTPKEILKTYPMDED--IWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDII 167 (283)
T ss_dssp EECSSCEEEECCCCHH--HHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCC
T ss_pred EEECCEEEEEecCCHH--HHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCce
Confidence 9986655554433221 1222222222110 011122222111000 0000 00000 00
Q ss_pred ----c-chhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHH
Q 003042 713 ----F-GSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFE 787 (854)
Q Consensus 713 ----~-~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~ 787 (854)
+ ......++.+.+.+.+.+....+.++..++||+|+++|||.|++.+++++ |++++++++|||+.||++||+
T Consensus 168 ki~i~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~e~ia~GD~~NDi~ml~ 244 (283)
T 3dao_A 168 KFTVFHPDKCEELCTPVFIPAWNKKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRF---DLLPDEVCCFGDNLNDIEMLQ 244 (283)
T ss_dssp EEEEECSSCHHHHHTTTHHHHHTTTEEEEEETTTEEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHH
T ss_pred EEEEEcChHHHHHHHHHHHHHhcCCEEEEEecCceEEEeeCCCcHHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHH
Confidence 0 01223444555655666555677889999999999999999999999999 999999999999999999999
Q ss_pred HhhhhcCCCCCCCCccEEEEEecCC----CcccceEeCC--HhHHHHHHHHH
Q 003042 788 SIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDD--TAEVINLLEGL 833 (854)
Q Consensus 788 ~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~--~~eV~~~L~~l 833 (854)
.+|. +|+||++ +..|+|++.+ .++|+++|+++
T Consensus 245 ~ag~--------------~vam~na~~~~k~~A~~v~~s~~edGv~~~l~~~ 282 (283)
T 3dao_A 245 NAGI--------------SYAVSNARQEVIAAAKHTCAPYWENGVLSVLKSF 282 (283)
T ss_dssp HSSE--------------EEEETTSCHHHHHHSSEEECCGGGTHHHHHHHHT
T ss_pred hCCC--------------EEEcCCCCHHHHHhcCeECCCCCCChHHHHHHHh
Confidence 9985 7888886 4789999976 45699999876
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-25 Score=240.47 Aligned_cols=231 Identities=15% Similarity=0.187 Sum_probs=155.1
Q ss_pred HHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEE
Q 003042 577 ASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYF 655 (854)
Q Consensus 577 ~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~ 655 (854)
.++|+.+++|+|+|||||||++ +.+.++++++++|+++ +++|+.|+++|||+...+..++..+. ..++++.||+.
T Consensus 13 ~~~~~~~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~ 88 (285)
T 3pgv_A 13 ENLYFQGMYQVVASDLDGTLLS---PDHFLTPYAKETLKLL-TARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGAR 88 (285)
T ss_dssp --------CCEEEEECCCCCSC---TTSCCCHHHHHHHHHH-HTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTE
T ss_pred ccccccCcceEEEEeCcCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeE
Confidence 3689999999999999999999 8899999999999999 89999999999999999998886542 34578999999
Q ss_pred EEECCCc-ceEEccccccchHHHHHHHHHHHHhcc---------CCcceEecccceEEEe-------eccCCC------c
Q 003042 656 TRWSKNS-AWEICSLTRDFDWKEIAEPVMKLYTET---------TDGSFIEDKETAIVWH-------HQHADP------H 712 (854)
Q Consensus 656 I~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~y~~~---------~~g~~ie~k~~~l~~~-------~~~~d~------~ 712 (854)
+....+. .+...++ .+.+.++++.+... ..+.+........... +...+. .
T Consensus 89 i~~~~~~~l~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (285)
T 3pgv_A 89 VHDSDGQQIFAHNLD------RDIAADLFEIVRNDPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQG 162 (285)
T ss_dssp EECTTSCEEEECCCC------HHHHHHHTTTTTTCTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSS
T ss_pred EECCCCCEEEecCCC------HHHHHHHHHHHhhcCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCC
Confidence 9864333 3332221 12233333311111 0111111000000000 000000 0
Q ss_pred c--------chhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHH
Q 003042 713 F--------GSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDED 784 (854)
Q Consensus 713 ~--------~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~ 784 (854)
. ......++.+.+.+.+......+.++..++||+|++++||.|++++++++ |++++++++|||+.||++
T Consensus 163 i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~l---gi~~~~~ia~GD~~NDi~ 239 (285)
T 3pgv_A 163 ISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKML---GYTLSDCIAFGDGMNDAE 239 (285)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHH
T ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHh---CCCHHHEEEECCcHhhHH
Confidence 0 01223445555655555444566778999999999999999999999999 999999999999999999
Q ss_pred HHHHhhhhcCCCCCCCCccEEEEEecCC----Ccccce--EeC--CHhHHHHHHHHHH
Q 003042 785 MFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKY--YLD--DTAEVINLLEGLA 834 (854)
Q Consensus 785 Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y--~l~--~~~eV~~~L~~l~ 834 (854)
||+.+|. +|+||++ +..|+| ++. +.++|+++|+++.
T Consensus 240 ml~~ag~--------------~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~~~~ 283 (285)
T 3pgv_A 240 MLSMAGK--------------GCIMANAHQRLKDLHPELEVIGSNADDAVPRYLRKLY 283 (285)
T ss_dssp HHHHSSE--------------EEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHHHHH
T ss_pred HHHhcCC--------------EEEccCCCHHHHHhCCCCEecccCCcchHHHHHHHHh
Confidence 9999985 7999986 356775 554 4678999999875
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=247.32 Aligned_cols=312 Identities=16% Similarity=0.166 Sum_probs=231.1
Q ss_pred HHHHHHHHHHHHHHHHHh----cCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCCh---hhhh--------c
Q 003042 169 WQAYLSANKVFADKVMEV----INPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS---EIYR--------T 233 (854)
Q Consensus 169 w~~Y~~vN~~fa~~i~~~----~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~---e~~~--------~ 233 (854)
+..+....+.....+... .+| |+|++|+++..+++.++++ ..++|+.+.+|..++.. ..+. .
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~--Dii~~~~~~~~~~~~~~~~-~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~ 175 (439)
T 3fro_A 99 IRKAVTFGRASVLLLNDLLREEPLP--DVVHFHDWHTVFAGALIKK-YFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAP 175 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCC--SEEEEESGGGHHHHHHHHH-HHCCCEEEEESCCCCCCEEHHHHHHTTCGGGCC
T ss_pred hhhhHHHHHHHHHHHHHHhccCCCC--eEEEecchhhhhhHHHHhh-ccCCCEEEEecccccccCchHHhCccccccccc
Confidence 344444444444444433 245 9999999999888888874 45799999999998631 1111 1
Q ss_pred CCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHH
Q 003042 234 LPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTG 313 (854)
Q Consensus 234 lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~ 313 (854)
.....-.-..+-.+|.|.+.+..+++.... .++.. ..++.++|+|||.+.|.+....+...
T Consensus 176 ~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~----~~~~~---------------~~~i~vi~ngvd~~~~~~~~~~~~~~ 236 (439)
T 3fro_A 176 YPDIDPEHTGGYIADIVTTVSRGYLIDEWG----FFRNF---------------EGKITYVFNGIDCSFWNESYLTGSRD 236 (439)
T ss_dssp SSEECHHHHHHHHCSEEEESCHHHHHHTHH----HHGGG---------------TTSEEECCCCCCTTTSCGGGSCSCHH
T ss_pred cceeeHhhhhhhhccEEEecCHHHHHHHhh----hhhhc---------------CCceeecCCCCCchhcCcccccchhh
Confidence 111123334455799999999887776322 11111 12467899999999887553333344
Q ss_pred HHHHHHHHHc--CCCEEEEEecCcc-ccCCHHHHHHHHHHHHHhC--CCCCCcEEEEEEecCCCCChhHHHHHHHHHHHH
Q 003042 314 QKVKELKEKF--DGKIVILGVDDMD-LFKGISLKFLAMGQLLEQH--PDLRGKVVLVQITNPARSSGKDVQDLLSDTNRI 388 (854)
Q Consensus 314 ~~~~~l~~~~--~~~~iil~VdRld-~~KGi~~~l~A~~~ll~~~--p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~ 388 (854)
.....+++++ .++++|+++||+. +.||+..+++|++++.+++ |++ .|+++|.. + .++.++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~----~l~i~G~g-----~--~~~~~~l~~~ 305 (439)
T 3fro_A 237 ERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEM----RFIIIGKG-----D--PELEGWARSL 305 (439)
T ss_dssp HHHHHHHHHHTCCSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGE----EEEEECCC-----C--HHHHHHHHHH
T ss_pred hhHHHHHHHcCCCCCcEEEEEcccccccccHHHHHHHHHHHHhcccCCCe----EEEEEcCC-----C--hhHHHHHHHH
Confidence 4556677776 3449999999999 9999999999999998766 654 48888742 2 2344555555
Q ss_pred HHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCc
Q 003042 389 AEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKS 468 (854)
Q Consensus 389 v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g 468 (854)
+.+.+ .++++.|.++.+++..+|+.||++|+||..||||++++|||+| |.
T Consensus 306 ~~~~~---------~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~---------------------G~ 355 (439)
T 3fro_A 306 EEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL---------------------GA 355 (439)
T ss_dssp HHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHT---------------------TC
T ss_pred HhhcC---------CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHC---------------------CC
Confidence 55522 4777888899999999999999999999999999999999999 45
Q ss_pred eEEEecCccccccC--CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHHHHH
Q 003042 469 VIIVSEFIGCSPSL--SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERACR 543 (854)
Q Consensus 469 ~lV~Se~~G~~~~l--~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~ 543 (854)
|+|+|+.+|..+.+ ..|++++|.|++++|++|.+++.+.++.++...+..+++++++++..+++++++.++++.+
T Consensus 356 Pvi~s~~~~~~e~~~~~~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 432 (439)
T 3fro_A 356 IPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSID 432 (439)
T ss_dssp EEEEESSTHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSC
T ss_pred CeEEcCCCCcceeEEcCceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHH
Confidence 99999999988888 3489999999999999999999955556666777778888889999999999988877543
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.6e-25 Score=238.75 Aligned_cols=229 Identities=14% Similarity=0.260 Sum_probs=161.9
Q ss_pred hhcCCeEEEEecCCCCCCCCCCCCCCCHH-HHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEE
Q 003042 581 NKTNSRLILLDYDGTVMPQTSEDKRPSTE-VLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRW 658 (854)
Q Consensus 581 ~~~~~klI~~DlDGTLl~~~~~~~~is~~-~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~ 658 (854)
..|++|+|+||+||||++ +.+.+++. +.++|+++ +++|+.|+++|||+...+..++..+. ..++++.||+.+..
T Consensus 33 ~~M~iKli~fDlDGTLld---~~~~i~~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~ 108 (304)
T 3l7y_A 33 GSMSVKVIATDMDGTFLN---SKGSYDHNRFQRILKQL-QERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIIS 108 (304)
T ss_dssp ---CCSEEEECCCCCCSC---TTSCCCHHHHHHHHHHH-HHTTCEEEEECSSCHHHHHTTCTTTGGGSEEEEGGGTEEEE
T ss_pred CceeeEEEEEeCCCCCCC---CCCccCHHHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHhCCCCcEEeCCCcEEEE
Confidence 346899999999999999 88899998 89999999 88999999999999999999887663 36789999999977
Q ss_pred CCCcceEEccccccchHHHHHHHHHHHHhcc----------CCcceEecccc------------eEE-E-eeccC-CCc-
Q 003042 659 SKNSAWEICSLTRDFDWKEIAEPVMKLYTET----------TDGSFIEDKET------------AIV-W-HHQHA-DPH- 712 (854)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~----------~~g~~ie~k~~------------~l~-~-~~~~~-d~~- 712 (854)
.+...+...++. +.+.++++.+.+. ..+.+...... ... . .+... ...
T Consensus 109 ~~~~i~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 182 (304)
T 3l7y_A 109 KNQSLIEVFQQR------EDIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPDERF 182 (304)
T ss_dssp TTEEEEECCCCH------HHHHHHHHHHHHHCTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESCCSSCC-CCE
T ss_pred CCEEEEEecCCH------HHHHHHHHHHHHhcCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCCHHHcCcCCe
Confidence 655444433221 1222232222221 11222111100 000 0 00000 000
Q ss_pred ------cchhhHHHHHHHHHHHhcC-CCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHH
Q 003042 713 ------FGSCQAKELLDHLENVLAN-EPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDM 785 (854)
Q Consensus 713 ------~~~~~~~el~~~l~~~l~~-~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~M 785 (854)
......+++.+.+.+.+.+ ....+.++..++||+|++++||.|++.+++++ |++++++++|||+.||++|
T Consensus 183 ~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~l---gi~~~e~i~~GDs~NDi~m 259 (304)
T 3l7y_A 183 FKLTLQVKEEESAQIMKAIADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRW---NFTSDHLMAFGDGGNDIEM 259 (304)
T ss_dssp EEEEEECCGGGHHHHHHHHHTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHH
T ss_pred EEEEEEcCHHHHHHHHHHHHHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHh---CcCHHHEEEECCCHHHHHH
Confidence 0012345566666655555 34566778899999999999999999999999 9999999999999999999
Q ss_pred HHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeCCH--hHHHHHHHHHHhc
Q 003042 786 FESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDDT--AEVINLLEGLATE 836 (854)
Q Consensus 786 f~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~~--~eV~~~L~~l~~~ 836 (854)
|+.+|. +|+||++ +..|+|++++. ++|+++|+++...
T Consensus 260 ~~~ag~--------------~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~~~~ 302 (304)
T 3l7y_A 260 LKLAKY--------------SYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLAS 302 (304)
T ss_dssp HHHCTE--------------EEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHHHC
T ss_pred HHhcCC--------------eEEcCCcCHHHHHhccEEcCCCCcchHHHHHHHHHHh
Confidence 999985 7889986 47899999764 5599999988753
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=232.73 Aligned_cols=232 Identities=17% Similarity=0.144 Sum_probs=159.6
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc----ccceeecCcEEEEE
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE----KLGLSAEHGYFTRW 658 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~----~l~liaenG~~I~~ 658 (854)
|++|+|+||+||||++ +.+.+++.++++|+++ +++|+.++++|||+...+..++..+. ..++++.||+.+..
T Consensus 3 M~~kli~fDlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~ 78 (279)
T 4dw8_A 3 LKYKLIVLDLDGTLTN---SKKEISSRNRETLIRI-QEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIIN 78 (279)
T ss_dssp -CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEE
T ss_pred CcceEEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEE
Confidence 5689999999999999 8899999999999999 88899999999999999998886553 35678999999986
Q ss_pred C--CCcceEEccccccchHHHHHHHHHHH----HhccCCcceEecccceE--------EEeeccCC-------Cc---c-
Q 003042 659 S--KNSAWEICSLTRDFDWKEIAEPVMKL----YTETTDGSFIEDKETAI--------VWHHQHAD-------PH---F- 713 (854)
Q Consensus 659 ~--~~~~~~~~~~~~~~~~~~~v~~~~~~----y~~~~~g~~ie~k~~~l--------~~~~~~~d-------~~---~- 713 (854)
. +...+...++.. .+.+.+....+. ......+.+........ ...+...+ .. .
T Consensus 79 ~~~~~~~~~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~ 156 (279)
T 4dw8_A 79 WESKEMMYENVLPNE--VVPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCL 156 (279)
T ss_dssp TTTCCEEEECCCCGG--GHHHHHHHHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEE
T ss_pred CCCCeEEEEecCCHH--HHHHHHHHHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEE
Confidence 4 333333322221 222222211111 00001111111000000 00000000 00 0
Q ss_pred ---chhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhh
Q 003042 714 ---GSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIE 790 (854)
Q Consensus 714 ---~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag 790 (854)
......++.+.+.+.+......+.++..++|++|+++||+.+++.+++++ |++++++++|||+.||++||+.+|
T Consensus 157 ~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~NDi~m~~~ag 233 (279)
T 4dw8_A 157 IVGDAGKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENI---GMTREEVIAIGDGYNDLSMIKFAG 233 (279)
T ss_dssp EESCHHHHHHHHHHHHHHTTTTCEEEEEETTEEEEECTTCCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSS
T ss_pred EeCCHHHHHHHHHHHHHHhcCCEEEEEcCCcEEEEecCCCChHHHHHHHHHHc---CCCHHHEEEECCChhhHHHHHHcC
Confidence 01233455566665565556677888999999999999999999999999 999999999999999999999998
Q ss_pred hhcCCCCCCCCccEEEEEecCC----CcccceEeCC--HhHHHHHHHHHHhcc
Q 003042 791 QAVADPSVPGIAEVFACTVGQK----PSMAKYYLDD--TAEVINLLEGLATES 837 (854)
Q Consensus 791 ~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~--~~eV~~~L~~l~~~~ 837 (854)
. +|+||++ +..|+|++.+ .++|+++|+++....
T Consensus 234 ~--------------~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~~~ 272 (279)
T 4dw8_A 234 M--------------GVAMGNAQEPVKKAADYITLTNDEDGVAEAIERIFNVE 272 (279)
T ss_dssp E--------------EEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHC---
T ss_pred c--------------EEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHHHHhcc
Confidence 4 7899986 4679999975 577999999987544
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.5e-24 Score=230.85 Aligned_cols=226 Identities=15% Similarity=0.147 Sum_probs=157.6
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECCC
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKN 661 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~~ 661 (854)
|++|+|+||+||||++ +.+.+++.++++|+++ +++|+.++++|||+...+..++..+. ..++++.||+.+....+
T Consensus 4 M~~kli~fDlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~ 79 (290)
T 3dnp_A 4 MSKQLLALNIDGALLR---SNGKIHQATKDAIEYV-KKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKID 79 (290)
T ss_dssp --CCEEEECCCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTT
T ss_pred CcceEEEEcCCCCCCC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCC
Confidence 5689999999999999 8899999999999999 88899999999999999988876553 23789999999986333
Q ss_pred -cceEEccccccchHHHHHHHHHHHHhccCC--------cceEecccceE-----------------EEeeccC------
Q 003042 662 -SAWEICSLTRDFDWKEIAEPVMKLYTETTD--------GSFIEDKETAI-----------------VWHHQHA------ 709 (854)
Q Consensus 662 -~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~--------g~~ie~k~~~l-----------------~~~~~~~------ 709 (854)
..+...++ .+.+.++++.+.+... +.+........ ...+...
T Consensus 80 ~~~~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (290)
T 3dnp_A 80 APFFEKRIS------DDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMD 153 (290)
T ss_dssp SCSEECCCC------HHHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHH
T ss_pred CEEEecCCC------HHHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhc
Confidence 23332222 2334444444433211 11111100000 0000000
Q ss_pred -CCc-------cchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcc
Q 003042 710 -DPH-------FGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRS 781 (854)
Q Consensus 710 -d~~-------~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~N 781 (854)
... .......++.+.+.. +......+.++..++|++|++++||.|++.+++++ |++++++++|||+.|
T Consensus 154 ~~~~~~ki~~~~~~~~~~~~~~~l~~-~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~N 229 (290)
T 3dnp_A 154 EPVSAPVIEVYTEHDIQHDITETITK-AFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASEL---GLSMDDVVAIGHQYD 229 (290)
T ss_dssp SCCCCSEEEEECCGGGHHHHHHHHHH-HCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSGG
T ss_pred CCCCceEEEEeCCHHHHHHHHHHHHh-hCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHc---CCCHHHEEEECCchh
Confidence 000 011233444455422 23334556778999999999999999999999999 999999999999999
Q ss_pred cHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeCC--HhHHHHHHHHHHhc
Q 003042 782 DEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDD--TAEVINLLEGLATE 836 (854)
Q Consensus 782 D~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~--~~eV~~~L~~l~~~ 836 (854)
|++||+.+|. +|+||++ +..|+|++.+ .++|+++|+++...
T Consensus 230 Di~m~~~ag~--------------~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~~~~~ 276 (290)
T 3dnp_A 230 DLPMIELAGL--------------GVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFRM 276 (290)
T ss_dssp GHHHHHHSSE--------------EEECTTSCHHHHHHSSEECCCTTTTHHHHHHHHHHHH
T ss_pred hHHHHHhcCC--------------EEEecCCcHHHHHhcCEECCCCCccHHHHHHHHHHHh
Confidence 9999999985 7889986 4789999876 45699999998764
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.4e-24 Score=228.54 Aligned_cols=223 Identities=17% Similarity=0.262 Sum_probs=154.9
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcc
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSA 663 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~ 663 (854)
++|+|+||+||||++ +.+.+++.+.++|+++ +++|+.++++|||+...+..++..+..-.+++.||+.+...+...
T Consensus 4 M~kli~fDlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~ 79 (274)
T 3fzq_A 4 LYKLLILDIDGTLRD---EVYGIPESAKHAIRLC-QKNHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYHGELL 79 (274)
T ss_dssp CCCEEEECSBTTTBB---TTTBCCHHHHHHHHHH-HHTTCEEEEECSSCTTTSCHHHHTTCCSEEEETTTTEEEETTEEE
T ss_pred cceEEEEECCCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEeCCChHHHHHHHHHcCCCEEEecCccEEEECCEEE
Confidence 479999999999999 8889999999999999 889999999999999999998876643357899999998765555
Q ss_pred eEEccccccchHHHHHHHHHHHHhcc--------CCcceEecccceE--------------EEe-----------eccC-
Q 003042 664 WEICSLTRDFDWKEIAEPVMKLYTET--------TDGSFIEDKETAI--------------VWH-----------HQHA- 709 (854)
Q Consensus 664 ~~~~~~~~~~~~~~~v~~~~~~y~~~--------~~g~~ie~k~~~l--------------~~~-----------~~~~- 709 (854)
+...++. +.+.++++.+.+. ..+.+........ .+. ....
T Consensus 80 ~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (274)
T 3fzq_A 80 YNQSFNQ------RLIKEVVCLLKKREVAFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEKITYENNIEEYK 153 (274)
T ss_dssp EECCCCH------HHHHHHHHHHHHHTCEEEEECSSCEEECHHHHHHHHHHHHTTTSCCTTHHHHCCSSSCCCCCGGGCS
T ss_pred EEcCCCH------HHHHHHHHHHHHCCceEEEEeCCceEeCCchHHHHHHHHhhhccchhhhhhhhhhhcccccchhhhc
Confidence 5443322 1222222222211 1111111000000 000 0000
Q ss_pred CCc---cchhhHHHHHHHHHHHhcCCCEEEEEcC--eEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHH
Q 003042 710 DPH---FGSCQAKELLDHLENVLANEPVVVKRGQ--HIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDED 784 (854)
Q Consensus 710 d~~---~~~~~~~el~~~l~~~l~~~~~~v~~g~--~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~ 784 (854)
... .......+..+.+.+.+......+.++. .++|+.|++++||.+++.+++++ |++++++++|||+.||++
T Consensus 154 ~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~NDi~ 230 (274)
T 3fzq_A 154 SQDIHKICLWSNEKVFDEVKDILQDKMELAQRDISSQYYEIIQKDFHKGKAIKRLQERL---GVTQKETICFGDGQNDIV 230 (274)
T ss_dssp SCCCCEEEEECCHHHHHHHHHHHGGGEEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHH---TCCSTTEEEECCSGGGHH
T ss_pred ccCeEEEEEEcCHHHHHHHHHHhhcceEEEeccCCCceEEEeeCCCCHHHHHHHHHHHc---CCCHHHEEEECCChhHHH
Confidence 000 0000122334444444444334555666 89999999999999999999999 999999999999999999
Q ss_pred HHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeCC--HhHHHHHHHHH
Q 003042 785 MFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDD--TAEVINLLEGL 833 (854)
Q Consensus 785 Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~--~~eV~~~L~~l 833 (854)
||+.+|. +|+||++ +..|+|++++ .++|++.|+++
T Consensus 231 m~~~ag~--------------~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~~ 271 (274)
T 3fzq_A 231 MFQASDV--------------TIAMKNSHQQLKDIATSICEDIFDNGIYKELKRR 271 (274)
T ss_dssp HHHTCSE--------------EEEETTSCHHHHHHCSEEECCGGGTHHHHHHHHT
T ss_pred HHHhcCc--------------eEEecCccHHHHHhhhheeCCCchhHHHHHHHHh
Confidence 9999984 7889986 4789999976 56799999876
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.1e-23 Score=221.76 Aligned_cols=227 Identities=18% Similarity=0.266 Sum_probs=161.4
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHH-HHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECC
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEV-LSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSK 660 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~-~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~ 660 (854)
|++|+|+|||||||++ +++.+++++ +++|+++ +++|+.|+|||||+...+.+++..+. ..+++++||+.+...+
T Consensus 1 m~~kli~~DlDGTLl~---~~~~i~~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~ 76 (271)
T 1rlm_A 1 MAVKVIVTDMDGTFLN---DAKTYNQPRFMAQYQEL-KKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHG 76 (271)
T ss_dssp -CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHHH-HHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETT
T ss_pred CCccEEEEeCCCCCCC---CCCcCCHHHHHHHHHHH-HHCCCEEEEEeCCcHHHHHHHHHhcCCCCEEEECCccEEEECC
Confidence 4689999999999999 788999995 9999999 88999999999999999998886653 4578999999998765
Q ss_pred CcceEEccccccchHHHHHHHHHHHHhcc---------CCcceEecccc------------eEEE--eeccCCCc-----
Q 003042 661 NSAWEICSLTRDFDWKEIAEPVMKLYTET---------TDGSFIEDKET------------AIVW--HHQHADPH----- 712 (854)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~v~~~~~~y~~~---------~~g~~ie~k~~------------~l~~--~~~~~d~~----- 712 (854)
...+...++. +.++++++.+.+. ..+.+...... .+.. .+......
T Consensus 77 ~~i~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~ 150 (271)
T 1rlm_A 77 KQLFHGELTR------HESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFS 150 (271)
T ss_dssp EEEEECCCCH------HHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEE
T ss_pred eEEEEecCCH------HHHHHHHHHHHhCCCccEEEEeCCCEEeeCCCCHHHHHHHHHhCCCCEEeCchhhCCCceEEEE
Confidence 4444432221 2233333333221 12222211100 0000 00000000
Q ss_pred --cchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhh
Q 003042 713 --FGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIE 790 (854)
Q Consensus 713 --~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag 790 (854)
.......++.+++.+.+......+.++..++||.|++++|+.+++.+++++ |++++++++|||+.||++|++.+|
T Consensus 151 i~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l---~i~~~~~~~~GD~~nD~~m~~~ag 227 (271)
T 1rlm_A 151 LNLPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRW---DLSPQNVVAIGDSGNDAEMLKMAR 227 (271)
T ss_dssp EECCGGGHHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHCS
T ss_pred EEcCHHHHHHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHh---CCCHHHEEEECCcHHHHHHHHHcC
Confidence 011234556666665565555666778889999999999999999999999 999999999999999999999998
Q ss_pred hhcCCCCCCCCccEEEEEecCC----CcccceEeCCH--hHHHHHHHHHHhc
Q 003042 791 QAVADPSVPGIAEVFACTVGQK----PSMAKYYLDDT--AEVINLLEGLATE 836 (854)
Q Consensus 791 ~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~~--~eV~~~L~~l~~~ 836 (854)
. +|+||+. +..|+|++.+. ++|++.|+++...
T Consensus 228 ~--------------~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~~~~~~ 265 (271)
T 1rlm_A 228 Y--------------SFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDN 265 (271)
T ss_dssp E--------------EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHHT
T ss_pred C--------------eEEeCCccHHHHHhCCeeCcCCCCChHHHHHHHHHhh
Confidence 5 6778876 35799999764 6799999998753
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-23 Score=226.65 Aligned_cols=233 Identities=17% Similarity=0.220 Sum_probs=154.4
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcc----cceeecCcEEEEE
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEK----LGLSAEHGYFTRW 658 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~----l~liaenG~~I~~ 658 (854)
|++|+|+||+||||++ +++.++++++++|+++ +++|+.|++||||+...+..++..+.- .+++++||+.|..
T Consensus 3 mm~kli~~DlDGTLl~---~~~~i~~~~~~aL~~l-~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~ 78 (282)
T 1rkq_A 3 LAIKLIAIDMDGTLLL---PDHTISPAVKNAIAAA-RARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQK 78 (282)
T ss_dssp CCCCEEEECCCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEE
T ss_pred ccceEEEEeCCCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEE
Confidence 4689999999999999 7889999999999999 889999999999999999988865531 2579999999988
Q ss_pred --CCCcceEEccccccchHHHHHHHHHHHHh-----ccCCcceEeccc---c--------eEEEe---eccCC--Ccc--
Q 003042 659 --SKNSAWEICSLTRDFDWKEIAEPVMKLYT-----ETTDGSFIEDKE---T--------AIVWH---HQHAD--PHF-- 713 (854)
Q Consensus 659 --~~~~~~~~~~~~~~~~~~~~v~~~~~~y~-----~~~~g~~ie~k~---~--------~l~~~---~~~~d--~~~-- 713 (854)
.+...+...++. ++...+...++.+. ....+.+..... . .+... +.... ...
T Consensus 79 ~~~~~~i~~~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 155 (282)
T 1rkq_A 79 AADGSTVAQTALSY---DDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLK 155 (282)
T ss_dssp TTTCCEEEECCBCH---HHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCE
T ss_pred CCCCeEEEEecCCH---HHHHHHHHHHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCceE
Confidence 344444443322 22111212221110 011122222110 0 00000 01110 000
Q ss_pred ----c-hhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHH
Q 003042 714 ----G-SCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFES 788 (854)
Q Consensus 714 ----~-~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ 788 (854)
. .....++.+.+.+.+......+.++..++||+|++++|+.+++.+++++ |++++++++|||+.||++||+.
T Consensus 156 i~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~---~~~~~~~~~~GD~~nD~~m~~~ 232 (282)
T 1rkq_A 156 VMMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVL---GIKPEEIMAIGDQENDIAMIEY 232 (282)
T ss_dssp EEEECCHHHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHHhcCCEEEEEeCCceEEecCCCCCCHHHHHHHHHHh---CCCHHHEEEECCcHHHHHHHHH
Confidence 0 0112223333322222222345578889999999999999999999999 9999999999999999999999
Q ss_pred hhhhcCCCCCCCCccEEEEEecCC----CcccceEeCC--HhHHHHHHHHHHhccCC
Q 003042 789 IEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDD--TAEVINLLEGLATESVH 839 (854)
Q Consensus 789 ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~--~~eV~~~L~~l~~~~~~ 839 (854)
+|. +|+||+. +..|+|++++ .++|+++|+++......
T Consensus 233 ag~--------------~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~~~~~~~~~ 275 (282)
T 1rkq_A 233 AGV--------------GVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYVLNEGG 275 (282)
T ss_dssp SSE--------------EEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHTTC---
T ss_pred CCc--------------EEEecCCcHHHHhhCCEEecCCCcchHHHHHHHHHhcCCC
Confidence 984 6788875 3579999876 56799999998754433
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-23 Score=220.89 Aligned_cols=224 Identities=16% Similarity=0.194 Sum_probs=150.6
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCc
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNS 662 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~ 662 (854)
|++|+|+||+||||++ +.+.+++.++++|+++ ++.|+.++++|||+...+..++..+.--.+++.||+++...+..
T Consensus 1 M~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~ 76 (258)
T 2pq0_A 1 MGRKIVFFDIDGTLLD---EQKQLPLSTIEAVRRL-KQSGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNV 76 (258)
T ss_dssp -CCCEEEECTBTTTBC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEE
T ss_pred CCceEEEEeCCCCCcC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEE
Confidence 3579999999999999 7888999999999999 88999999999999999888775442223689999999876544
Q ss_pred ceEEccccccchHHHHHHHHHHHHhcc--------CCcceEeccc-ceE-------EEeeccCCCc-------c--chhh
Q 003042 663 AWEICSLTRDFDWKEIAEPVMKLYTET--------TDGSFIEDKE-TAI-------VWHHQHADPH-------F--GSCQ 717 (854)
Q Consensus 663 ~~~~~~~~~~~~~~~~v~~~~~~y~~~--------~~g~~ie~k~-~~l-------~~~~~~~d~~-------~--~~~~ 717 (854)
.+...++. +.+.++++.+.+. ..+.+..... ... ...+....+. + ....
T Consensus 77 i~~~~~~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 150 (258)
T 2pq0_A 77 LYKQPLRR------EKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFC 150 (258)
T ss_dssp EEECCCCH------HHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECS
T ss_pred EEEecCCH------HHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEEC
Confidence 44433221 2233333322221 1111111000 000 0000001000 0 0000
Q ss_pred HHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCC
Q 003042 718 AKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPS 797 (854)
Q Consensus 718 ~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~ 797 (854)
.++....+.+.+.. ...+.+++.++||.|+++|||.|++.+++++ |++++++++|||+.||++||+.+|.
T Consensus 151 ~~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~ia~GDs~NDi~ml~~ag~------ 220 (258)
T 2pq0_A 151 RAEEEEPYVRNYPE-FRFVRWHDVSTDVLPAGGSKAEGIRMMIEKL---GIDKKDVYAFGDGLNDIEMLSFVGT------ 220 (258)
T ss_dssp CHHHHHHHHHHCTT-EEEEEEETTEEEEEESSCCHHHHHHHHHHHH---TCCGGGEEEECCSGGGHHHHHHSSE------
T ss_pred CHHHHHHHHHhCCC-eEEEEeCCceEEEEECCCChHHHHHHHHHHh---CCCHHHEEEECCcHHhHHHHHhCCc------
Confidence 11222233333332 2345567889999999999999999999999 9999999999999999999999985
Q ss_pred CCCCccEEEEEecCC----CcccceEeCC--HhHHHHHHHHHH
Q 003042 798 VPGIAEVFACTVGQK----PSMAKYYLDD--TAEVINLLEGLA 834 (854)
Q Consensus 798 ~~~~~~~~aV~vG~~----~s~A~y~l~~--~~eV~~~L~~l~ 834 (854)
+|+||++ +..|+|++++ .++|++.|+++.
T Consensus 221 --------~vam~na~~~~k~~A~~v~~~~~~dGva~~i~~~~ 255 (258)
T 2pq0_A 221 --------GVAMGNAHEEVKRVADFVTKPVDKEGIWYGLKQLQ 255 (258)
T ss_dssp --------EEEETTCCHHHHHTCSEEECCGGGTHHHHHHHHTT
T ss_pred --------EEEeCCCcHHHHHhCCEEeCCCCcchHHHHHHHhC
Confidence 6778875 4679999865 577999998764
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-23 Score=222.21 Aligned_cols=223 Identities=17% Similarity=0.178 Sum_probs=148.9
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEE-EECCC
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFT-RWSKN 661 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I-~~~~~ 661 (854)
+++|+|+||+||||++. +.+.+++.++++|+++ ++.|+.|+++|||+...+. .+..++..+++++||+.+ ...+.
T Consensus 10 ~miKli~~DlDGTLl~~--~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~-~~~~l~~~~~i~~nGa~i~~~~~~ 85 (268)
T 3r4c_A 10 HMIKVLLLDVDGTLLSF--ETHKVSQSSIDALKKV-HDSGIKIVIATGRAASDLH-EIDAVPYDGVIALNGAECVLRDGS 85 (268)
T ss_dssp SCCCEEEECSBTTTBCT--TTCSCCHHHHHHHHHH-HHTTCEEEEECSSCTTCCG-GGTTSCCCEEEEGGGTEEEETTSC
T ss_pred CceEEEEEeCCCCCcCC--CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCChHHhH-HHHhcCCCcEEEeCCcEEEEcCCe
Confidence 46899999999999982 2578999999999999 7889999999999988874 454554456789999999 77654
Q ss_pred cceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEE---------------eeccCCC---c--------cch
Q 003042 662 SAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVW---------------HHQHADP---H--------FGS 715 (854)
Q Consensus 662 ~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~---------------~~~~~d~---~--------~~~ 715 (854)
..+...++. +.+.++++.+.+..-...+......... .+..... + ...
T Consensus 86 ~~~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (268)
T 3r4c_A 86 VIRKVAIPA------QDFRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQLCF 159 (268)
T ss_dssp EEEECCCCH------HHHHHHHHHHHHTTCEEEEEETTEEEESCCCHHHHHHHHHHTCCCCCBCCHHHHHHHSCCCCEEE
T ss_pred EEEEecCCH------HHHHHHHHHHHHcCcEEEEEECCEEEEeCCcHHHHHHHHHcCCCCCcccchHHHhccCceEEEEE
Confidence 444333221 2223333322221111111111000000 0000000 0 000
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCC
Q 003042 716 CQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVAD 795 (854)
Q Consensus 716 ~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~ 795 (854)
....+....+.+.+.. ...+.++..++||.|++++||.|++.+++++ |++++++++|||+.||++||+.+|.
T Consensus 160 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~ia~GD~~NDi~m~~~ag~---- 231 (268)
T 3r4c_A 160 YFDEEAEQKVMPLLSG-LSATRWHPLFADVNVAGTSKATGLSLFADYY---RVKVSEIMACGDGGNDIPMLKAAGI---- 231 (268)
T ss_dssp ECCHHHHHHHGGGCTT-EEEEEEETTEEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHHHSSE----
T ss_pred ecChHHHHHHHHhCCC-cEEEEecCCeEEEeeCCCCHHHHHHHHHHHc---CCCHHHEEEECCcHHhHHHHHhCCC----
Confidence 0001111222222222 2456678899999999999999999999999 9999999999999999999999985
Q ss_pred CCCCCCccEEEEEecCC----CcccceEeCC--HhHHHHHHHHH
Q 003042 796 PSVPGIAEVFACTVGQK----PSMAKYYLDD--TAEVINLLEGL 833 (854)
Q Consensus 796 ~~~~~~~~~~aV~vG~~----~s~A~y~l~~--~~eV~~~L~~l 833 (854)
+|+||++ +..|+|++.+ .++|++.|+++
T Consensus 232 ----------~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~ 265 (268)
T 3r4c_A 232 ----------GVAMGNASEKVQSVADFVTDTVDNSGLYKALKHF 265 (268)
T ss_dssp ----------EEECTTSCHHHHHTCSEECCCTTTTHHHHHHHHT
T ss_pred ----------eEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHHh
Confidence 7889986 4679999865 67799999876
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-23 Score=227.60 Aligned_cols=237 Identities=18% Similarity=0.211 Sum_probs=160.3
Q ss_pred HHHHhhcCCeEEEEecCCCCCCCCCC-CCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhh--cCCc--c---cce
Q 003042 577 ASAYNKTNSRLILLDYDGTVMPQTSE-DKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF--SGVE--K---LGL 648 (854)
Q Consensus 577 ~~~y~~~~~klI~~DlDGTLl~~~~~-~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~--~~~~--~---l~l 648 (854)
......|++|+|+|||||||++ + ++.++++++++|++| ++.|+.|++||||+...+..++ ..++ . .++
T Consensus 19 ~~~~~~M~ikli~~DlDGTLl~---~~~~~is~~~~~al~~l-~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~ 94 (301)
T 2b30_A 19 EEALKGADIKLLLIDFDGTLFV---DKDIKVPSENIDAIKEA-IEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPG 94 (301)
T ss_dssp HHHTTTCCCCEEEEETBTTTBC---CTTTCSCHHHHHHHHHH-HHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSE
T ss_pred hhccccccccEEEEECCCCCcC---CCCCccCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHhhHHhhcccccCCCeE
Confidence 3333446789999999999999 7 889999999999999 8899999999999999998888 6543 1 368
Q ss_pred eecCcEEEEE-CCCcceEEccccccchHHHHHHHHHH----HH-hc-cCCcceEeccc-ce--------EEEeeccC---
Q 003042 649 SAEHGYFTRW-SKNSAWEICSLTRDFDWKEIAEPVMK----LY-TE-TTDGSFIEDKE-TA--------IVWHHQHA--- 709 (854)
Q Consensus 649 iaenG~~I~~-~~~~~~~~~~~~~~~~~~~~v~~~~~----~y-~~-~~~g~~ie~k~-~~--------l~~~~~~~--- 709 (854)
+++||+.|.. .+...+...++.. .+.+.++...+ .+ .. ...+.+..... .. ..+++...
T Consensus 95 I~~NGa~i~~~~~~~i~~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (301)
T 2b30_A 95 VYINGTIVYDQIGYTLLDETIETD--VYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNE 172 (301)
T ss_dssp EEGGGTEEECTTCCEEEECCCCHH--HHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHH
T ss_pred EEcCCeEEEeCCCCEEEEccCCHH--HHHHHHHHHHHcCCceEEEEEeCCEEEEcCchHHHHHHHHhhccCCceeecchh
Confidence 9999999987 4444444333221 12222211111 00 01 11122222110 00 00001100
Q ss_pred --C--Ccc------chhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCC
Q 003042 710 --D--PHF------GSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDD 779 (854)
Q Consensus 710 --d--~~~------~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs 779 (854)
+ +-. ......++.+.+.+.+......+.++..++||+|++++||.+++.+++++ |++++++++|||+
T Consensus 173 ~~~~~~i~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~---~~~~~~~~~~GD~ 249 (301)
T 2b30_A 173 MLKYRTMNKLMIVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHY---NISNDQVLVVGDA 249 (301)
T ss_dssp HTTCCCCSEEEECCCTTTHHHHHHHHHHHSTTTEEEEECTTSCEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECS
T ss_pred hhccCCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEeCCcceEecCCCCCcHHHHHHHHHHc---CCCHHHEEEECCC
Confidence 0 000 01224455555655444333445567889999999999999999999999 9999999999999
Q ss_pred cccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeC-C--HhHHHHHHHHHHhc
Q 003042 780 RSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLD-D--TAEVINLLEGLATE 836 (854)
Q Consensus 780 ~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~-~--~~eV~~~L~~l~~~ 836 (854)
.||++||+.+|. +|+||+. +..|+|+++ + .++|+++|+++...
T Consensus 250 ~nD~~m~~~ag~--------------~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~~~~~~ 299 (301)
T 2b30_A 250 ENDIAMLSNFKY--------------SFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFDL 299 (301)
T ss_dssp GGGHHHHHSCSE--------------EEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCC--------------eEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHHHHHhc
Confidence 999999999985 6788875 357999987 6 56799999988654
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-24 Score=233.35 Aligned_cols=227 Identities=15% Similarity=0.176 Sum_probs=131.3
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc----ccceeecCcEEEEE
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE----KLGLSAEHGYFTRW 658 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~----~l~liaenG~~I~~ 658 (854)
|++|+|+||+||||++ +.+.+++.++++|+++ +++|+.|+++|||+...+..++..+. ..+++++||+.+..
T Consensus 3 m~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~ 78 (279)
T 3mpo_A 3 LTIKLIAIDIDGTLLN---EKNELAQATIDAVQAA-KAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQT 78 (279)
T ss_dssp --CCEEEECC--------------CHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEE
T ss_pred cceEEEEEcCcCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEEC
Confidence 5689999999999999 8899999999999999 88999999999999999998886542 23588999994333
Q ss_pred CCCcc-eEEccccccchHHHHHHHHHHHHhcc--------CCcceEeccc-------------ceEEE-eeccCC--Ccc
Q 003042 659 SKNSA-WEICSLTRDFDWKEIAEPVMKLYTET--------TDGSFIEDKE-------------TAIVW-HHQHAD--PHF 713 (854)
Q Consensus 659 ~~~~~-~~~~~~~~~~~~~~~v~~~~~~y~~~--------~~g~~ie~k~-------------~~l~~-~~~~~d--~~~ 713 (854)
..+.. +...++ .+.+.++++.+.+. ..+.+..... ..... ...... ...
T Consensus 79 ~~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (279)
T 3mpo_A 79 ISGKVLTNHSLT------YEDYIDLEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTI 152 (279)
T ss_dssp TTSCEEEECCCC------HHHHHHHHHHHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCC
T ss_pred CCCCEEEecCCC------HHHHHHHHHHHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCc
Confidence 33332 222221 11223333322221 1111111110 00000 000000 000
Q ss_pred -------chhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHH
Q 003042 714 -------GSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMF 786 (854)
Q Consensus 714 -------~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf 786 (854)
......++.+.+.+.+.+....+.++..++||+|+++|||.|++.+++++ |++++++++|||+.||++||
T Consensus 153 ~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~NDi~m~ 229 (279)
T 3mpo_A 153 SKAMFVDYPQVIEQVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQL---GLTADDVMTLGDQGNDLTMI 229 (279)
T ss_dssp CEEEEECCHHHHHHHHHHCCHHHHHHEEEECCSSSEEEEEESSCCHHHHHHHHHHHT---TCCGGGEEEC--CCTTHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHHhCCCEEEEEecCceEEEecCCCChHHHHHHHHHHc---CCCHHHEEEECCchhhHHHH
Confidence 01122333333333333333456678999999999999999999999999 99999999999999999999
Q ss_pred HHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeCC--HhHHHHHHHHHHhc
Q 003042 787 ESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDD--TAEVINLLEGLATE 836 (854)
Q Consensus 787 ~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~--~~eV~~~L~~l~~~ 836 (854)
+.+|. +|+||++ +..|+|++.+ .++|+++|+++..-
T Consensus 230 ~~ag~--------------~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~~ 271 (279)
T 3mpo_A 230 KYAGL--------------GVAMGNAIDEVKEAAQAVTLTNAENGVAAAIRKYALN 271 (279)
T ss_dssp HHSTE--------------ECBC---CCHHHHHCSCBC------CHHHHHC-----
T ss_pred HhcCc--------------eeeccCCCHHHHHhcceeccCCCccHHHHHHHHHhcc
Confidence 99985 6778875 4679998865 56699999887643
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=9.2e-23 Score=238.67 Aligned_cols=293 Identities=15% Similarity=0.124 Sum_probs=198.6
Q ss_pred CCeEEEeCcccchHHHHHHhcc------CCCeEEEEecCCC-----CChhhhh-cCCC--------------------hH
Q 003042 191 EDYVWIHDYHLMVLPSFLRKRF------HRVKVGFFLHSPF-----PSSEIYR-TLPV--------------------RD 238 (854)
Q Consensus 191 ~D~vwihDyhl~llp~~lr~~~------~~~~i~~flH~pf-----P~~e~~~-~lp~--------------------r~ 238 (854)
+|++++||+|-.++|.+++... .++++.|+.|..- |....-. .+|. -.
T Consensus 154 ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 233 (536)
T 3vue_A 154 DVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKIN 233 (536)
T ss_dssp CEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEE
T ss_pred CEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchh
Confidence 3788999999999999998764 3689999999642 2111100 0111 12
Q ss_pred HHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCC--------c
Q 003042 239 EILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSL--------D 310 (854)
Q Consensus 239 eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~--------~ 310 (854)
-+-.++..||.|-.-++.|++..++... .|.. ++...+..+|.++|+|||.+.|.+.... .
T Consensus 234 ~~k~~i~~ad~v~tVS~~~a~ei~~~~~--~g~~---------l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~ 302 (536)
T 3vue_A 234 WMKAGILEADRVLTVSPYYAEELISGIA--RGCE---------LDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDAT 302 (536)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHHHTTCC--CCSS---------SCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTT
T ss_pred HHHHHHHhccEEEEcCHHHhhhhhcccc--cccc---------cccccccCCeEEEECCcchhhcCCCCccccccccchh
Confidence 3445788899999989999887654110 0111 1112344568899999999988643210 0
Q ss_pred h----HHHHHHHHHHHc-----CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHH
Q 003042 311 V----TGQKVKELKEKF-----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDL 381 (854)
Q Consensus 311 ~----~~~~~~~l~~~~-----~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l 381 (854)
. .......+++.+ ++.++|++|||+++.||+..+++|+.+++++++ .|+++|. |+.. .
T Consensus 303 ~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~------~l~l~G~---G~~~----~ 369 (536)
T 3vue_A 303 TAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDV------QIVLLGT---GKKK----F 369 (536)
T ss_dssp THHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSC------EEEEECC---BCHH----H
T ss_pred hhhhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCC------eEEEEec---cCch----H
Confidence 0 111223445544 367899999999999999999999999976543 2555553 2222 2
Q ss_pred HHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCC
Q 003042 382 LSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEK 461 (854)
Q Consensus 382 ~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~ 461 (854)
...+..+....+. .+. +.+..+.+++..+|+.||+||+||.+||||++++|||+|
T Consensus 370 ~~~~~~~~~~~~~--------~v~-~~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~---------------- 424 (536)
T 3vue_A 370 EKLLKSMEEKYPG--------KVR-AVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRY---------------- 424 (536)
T ss_dssp HHHHHHHHHHSTT--------TEE-EECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHT----------------
T ss_pred HHHHHHHHhhcCC--------ceE-EEEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHc----------------
Confidence 2233333333221 133 445678899999999999999999999999999999999
Q ss_pred CCCCCCceEEEecCccccccCCC---c----------eEeCCCCHHHHHHHHHHHhcC--CHHHHHHHHHHHhccccccC
Q 003042 462 NPPQKKSVIIVSEFIGCSPSLSG---A----------IRVNPWNVDAVADAMDSALQM--ENQEKILRHEKHYKYISSHD 526 (854)
Q Consensus 462 ~~~~~~g~lV~Se~~G~~~~l~~---a----------i~vnP~d~~~~A~ai~~aL~m--~~~er~~r~~~~~~~v~~~~ 526 (854)
|.|+|+|+.+|+.+.+.+ | ++|+|.|++++|++|.++|.. .+.-++.+.+.+. +.++
T Consensus 425 -----G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~~~~am~---~~fS 496 (536)
T 3vue_A 425 -----GTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMN---QDLS 496 (536)
T ss_dssp -----TCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHH---SCCS
T ss_pred -----CCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHHHHHHHH---hcCC
Confidence 569999999999988832 3 488999999999999999863 3332332222222 4589
Q ss_pred hHHHHHHHHHHHHH
Q 003042 527 VAYWAKSIDQDLER 540 (854)
Q Consensus 527 ~~~W~~~~l~~l~~ 540 (854)
|.+-|+++++-+.+
T Consensus 497 W~~~A~~y~~ly~~ 510 (536)
T 3vue_A 497 WKGPAKNWENVLLG 510 (536)
T ss_dssp SHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
Confidence 99989888776554
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.6e-23 Score=219.29 Aligned_cols=218 Identities=17% Similarity=0.190 Sum_probs=151.6
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcC-C--cccceeecCcEEEEEC
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG-V--EKLGLSAEHGYFTRWS 659 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~-~--~~l~liaenG~~I~~~ 659 (854)
|++|+|+||+||||++ +++.++++++++|+++ +++|+.|++||||++..+.+.++. + ...+++++||++|...
T Consensus 2 M~~kli~~DlDGTLl~---~~~~i~~~~~~~l~~l-~~~g~~~~iaTGR~~~~~~~~l~~~~~~~~~~~i~~NGa~i~~~ 77 (246)
T 3f9r_A 2 MKRVLLLFDVDGTLTP---PRLCQTDEMRALIKRA-RGAGFCVGTVGGSDFAKQVEQLGRDVLTQFDYVFAENGLLAYRN 77 (246)
T ss_dssp CCSEEEEECSBTTTBS---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHCTTHHHHCSEEEEGGGTEEEET
T ss_pred CCceEEEEeCcCCcCC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHhhhhccccCCEEEECCCcEEEEC
Confidence 6789999999999999 8889999999999999 889999999999999988888752 1 1236899999999988
Q ss_pred CCcceEEccc-cccch-HHHHHHHH----HHHHhccCCcceEecccceEEEee--ccCCC----ccchh-----hHHHHH
Q 003042 660 KNSAWEICSL-TRDFD-WKEIAEPV----MKLYTETTDGSFIEDKETAIVWHH--QHADP----HFGSC-----QAKELL 722 (854)
Q Consensus 660 ~~~~~~~~~~-~~~~~-~~~~v~~~----~~~y~~~~~g~~ie~k~~~l~~~~--~~~d~----~~~~~-----~~~el~ 722 (854)
+...|...++ ..+.+ +.+.++.. ...+.....+.|++.+...+.+.. ..... .+... ...++.
T Consensus 78 ~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (246)
T 3f9r_A 78 GLEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVEYRNGMINVSPIGRNCSQAERDEFEVYDNEHRVRASLI 157 (246)
T ss_dssp TEEEEECCHHHHTCHHHHHHHHHHHHHHHHTCCCSCCCSCCEEECSSCEEECSSCTTSCHHHHHHHHHHHHHHCHHHHHH
T ss_pred CEEEEEeeccccCCHHHHHHHHHHHHhhhhceeeecCCceEEEeecceeccccccccCchhhceeeeEecccchHHHHHH
Confidence 6666665432 01111 22222211 111122335667766554443311 11100 00000 023444
Q ss_pred HHHHHHhcCC-CEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCC----cccHHHHHHhhhhcCCCC
Q 003042 723 DHLENVLANE-PVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDD----RSDEDMFESIEQAVADPS 797 (854)
Q Consensus 723 ~~l~~~l~~~-~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs----~ND~~Mf~~ag~~~~~~~ 797 (854)
+.+.+.+.+. ...+.+++.++||+|+|+|||.|+++|++ ++++++||||+ .||++||+.+|.
T Consensus 158 ~~l~~~~~~~~~~~~~sg~~~leI~~~gv~Kg~al~~L~~-------~~~ev~afGD~~~~g~NDi~Ml~~a~~------ 224 (246)
T 3f9r_A 158 AELENSFPDFGLKYSIGGQISFDVFPVGWDKTYCLQFVED-------DFEEIHFFGDKTQEGGNDYEIYTDKRT------ 224 (246)
T ss_dssp HHHHHHCGGGCEEEEEETTTEEEEEETTCSGGGGGGGTTT-------TCSEEEEEESCCSTTSTTHHHHTCTTS------
T ss_pred HHHHhhCcCCcEEEEecCCeEEEEEeCCCCHHHHHHHHHc-------CcccEEEEeCCCCCCCCCHHHHhCCCc------
Confidence 5555555554 24578999999999999999999999986 68999999996 999999998764
Q ss_pred CCCCccEEEEEecCCCcccceEeCCHhHHHHHHHHHHh
Q 003042 798 VPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLAT 835 (854)
Q Consensus 798 ~~~~~~~~aV~vG~~~s~A~y~l~~~~eV~~~L~~l~~ 835 (854)
.+++ +.++.++++.|+.|+.
T Consensus 225 -------~g~~-----------v~n~~~~~~~~~~~~~ 244 (246)
T 3f9r_A 225 -------IGHK-----------VTSYKDTIAEVEKIIA 244 (246)
T ss_dssp -------EEEE-----------CSSHHHHHHHHHHHHH
T ss_pred -------cEEE-----------eCCHHHHHHHHHHHhc
Confidence 3555 4478888888888763
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.9e-23 Score=220.01 Aligned_cols=222 Identities=18% Similarity=0.224 Sum_probs=138.3
Q ss_pred HHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcC----C-cccceeec
Q 003042 577 ASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG----V-EKLGLSAE 651 (854)
Q Consensus 577 ~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~----~-~~l~liae 651 (854)
..+|+..++|+|++||||||++ +++.++++++++|++| +++ +.|+|||||+...+.+.++. + ...+++++
T Consensus 5 ~~~~~~~~~kli~~DlDGTLl~---~~~~is~~~~~al~~l-~~~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~~~I~~ 79 (262)
T 2fue_A 5 AQAARRKERVLCLFDVDGTLTP---ARQKIDPEVAAFLQKL-RSR-VQIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAE 79 (262)
T ss_dssp --------CEEEEEESBTTTBS---TTSCCCHHHHHHHHHH-TTT-SEEEEECSSCHHHHHHHHSSTTTHHHHCSEEEEG
T ss_pred cccccccCeEEEEEeCccCCCC---CCCcCCHHHHHHHHHH-HhC-CEEEEEcCCCHHHHHHHHhhhhcccccCCeEEEC
Confidence 3567778899999999999999 7889999999999999 778 99999999999988887753 1 11357999
Q ss_pred CcEEEEECCCcceEEcccc-ccch-HHHHHHHHHHHH-----hccCCcceEecccceEEEe-e-ccCCCc----cch---
Q 003042 652 HGYFTRWSKNSAWEICSLT-RDFD-WKEIAEPVMKLY-----TETTDGSFIEDKETAIVWH-H-QHADPH----FGS--- 715 (854)
Q Consensus 652 nG~~I~~~~~~~~~~~~~~-~~~~-~~~~v~~~~~~y-----~~~~~g~~ie~k~~~l~~~-~-~~~d~~----~~~--- 715 (854)
||+.|+.++...+...++. .+.+ ..+.+. .+..+ ....++.+.+.......+. + +..... +..
T Consensus 80 NGa~i~~~~~~i~~~~~~~~l~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (262)
T 2fue_A 80 NGTVQYKHGRLLSKQTIQNHLGEELLQDLIN-FCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDK 158 (262)
T ss_dssp GGTEEEETTEECCCCCHHHHHCHHHHHHHHH-HHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHHHH
T ss_pred CCcEEEeCCeEEEEeeccccCCHHHHHHHHH-HHHHcCceEEEEeCCeEEEechHHhhhHHhhcCCCcccccccEEEEcC
Confidence 9999988654444332100 0111 111111 11111 1122344443322221111 1 111100 000
Q ss_pred --hhHHHHHHHHHHHhcCCCEEEE-EcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeC----CcccHHHHHH
Q 003042 716 --CQAKELLDHLENVLANEPVVVK-RGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGD----DRSDEDMFES 788 (854)
Q Consensus 716 --~~~~el~~~l~~~l~~~~~~v~-~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD----s~ND~~Mf~~ 788 (854)
....++.+.+.+.+....+.+. ++..++||+|+++|||.|++.| + |+++++++|||| +.||++||+.
T Consensus 159 ~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~leI~~~~vsKg~al~~l---~---gi~~~~viafGDs~~~~~NDi~Ml~~ 232 (262)
T 2fue_A 159 KEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSL---D---QDSFDTIHFFGNETSPGGNDFEIFAD 232 (262)
T ss_dssp HHCHHHHHHHHHHHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHH---T---TSCCSEEEEEESCCSTTSTTHHHHHS
T ss_pred CHHHHHHHHHHHHHhCCCceEEEEECCCcEEEEecCCCCHHHHHHHH---H---CCCHHHEEEECCCCCCCCCCHHHHhc
Confidence 0122333444444443234444 4677999999999999999999 6 999999999999 9999999999
Q ss_pred hhhhcCCCCCCCCccEEEEEecCC----CcccceEeCCH
Q 003042 789 IEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDDT 823 (854)
Q Consensus 789 ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~~ 823 (854)
+|. .+++||++ +..|+|++++.
T Consensus 233 ~~~-------------~g~av~NA~~~~k~~a~~v~~~~ 258 (262)
T 2fue_A 233 PRT-------------VGHSVVSPQDTVQRCREIFFPET 258 (262)
T ss_dssp TTS-------------EEEECSSHHHHHHHHHHHHCTTC
T ss_pred Ccc-------------CcEEecCCCHHHHHhhheeCCCC
Confidence 875 36777875 45666766543
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=231.45 Aligned_cols=293 Identities=17% Similarity=0.219 Sum_probs=208.4
Q ss_pred CeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhc-C----C-ChHHHHH-HhhcCCeEeecCHHHHHHHHHH
Q 003042 192 DYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRT-L----P-VRDEILK-SLLNSDLIGFHTFDYARHFLSS 264 (854)
Q Consensus 192 D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~-l----p-~r~eil~-~ll~~dligf~t~~~~~~Fl~~ 264 (854)
|+|++|++...+++.++.+. .++++.+.+|..++....+.. . + .+..+.+ .+-.+|.|.+.+....+.+.+.
T Consensus 124 Div~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~ 202 (438)
T 3c48_A 124 DLIHSHYWLSGQVGWLLRDL-WRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHH 202 (438)
T ss_dssp SEEEEEHHHHHHHHHHHHHH-HTCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHHH
T ss_pred CEEEeCCccHHHHHHHHHHH-cCCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHH
Confidence 99999987655555555443 378899999987542211000 0 0 0111112 2346999999988776665432
Q ss_pred HHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccccCCH
Q 003042 265 CSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGI 341 (854)
Q Consensus 265 ~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~~KGi 341 (854)
+|+. ..++.++|+|||...|... .......+++++ .++++|+++||+.+.||+
T Consensus 203 ----~g~~---------------~~k~~vi~ngvd~~~~~~~-----~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~ 258 (438)
T 3c48_A 203 ----YDAD---------------PDRISVVSPGADVELYSPG-----NDRATERSRRELGIPLHTKVVAFVGRLQPFKGP 258 (438)
T ss_dssp ----HCCC---------------GGGEEECCCCCCTTTSCCC---------CHHHHHHTTCCSSSEEEEEESCBSGGGCH
T ss_pred ----hCCC---------------hhheEEecCCccccccCCc-----ccchhhhhHHhcCCCCCCcEEEEEeeecccCCH
Confidence 2322 1246789999998877422 111122355665 468899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHH
Q 003042 342 SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYA 421 (854)
Q Consensus 342 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~ 421 (854)
..+++|++.+.+++|+. ++.|+++|.+. ..++. .+++++++.+ .+..+.+.+.|.++.+++..+|+
T Consensus 259 ~~li~a~~~l~~~~p~~--~~~l~i~G~~~-~~g~~----~~~l~~~~~~-------~~l~~~v~~~g~~~~~~~~~~~~ 324 (438)
T 3c48_A 259 QVLIKAVAALFDRDPDR--NLRVIICGGPS-GPNAT----PDTYRHMAEE-------LGVEKRIRFLDPRPPSELVAVYR 324 (438)
T ss_dssp HHHHHHHHHHHHHCTTC--SEEEEEECCBC-----------CHHHHHHHH-------TTCTTTEEEECCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCc--ceEEEEEeCCC-CCCcH----HHHHHHHHHH-------cCCCCcEEEcCCCChHHHHHHHH
Confidence 99999999999998842 35688888532 11233 3344444444 23334456677899999999999
Q ss_pred hCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHHH
Q 003042 422 IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVAD 498 (854)
Q Consensus 422 ~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ 498 (854)
.||++|+||..||||++++|||+| |.|+|+|..+|..+.+. .|++++|.|++++|+
T Consensus 325 ~adv~v~ps~~e~~~~~~~Eama~---------------------G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~ 383 (438)
T 3c48_A 325 AADIVAVPSFNESFGLVAMEAQAS---------------------GTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWAD 383 (438)
T ss_dssp HCSEEEECCSCCSSCHHHHHHHHT---------------------TCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHH
T ss_pred hCCEEEECccccCCchHHHHHHHc---------------------CCCEEecCCCChhHHhhCCCcEEECCCCCHHHHHH
Confidence 999999999999999999999999 45999999988888883 389999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHHHHHhc
Q 003042 499 AMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERACRDH 545 (854)
Q Consensus 499 ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 545 (854)
+|.++++.+ +.+....+..++++.++++..+++++++.++++....
T Consensus 384 ~i~~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 429 (438)
T 3c48_A 384 ALATLLDDD-ETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANE 429 (438)
T ss_dssp HHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhc
Confidence 999999854 4455556666777777999999999999998877653
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.2e-22 Score=214.87 Aligned_cols=223 Identities=17% Similarity=0.150 Sum_probs=152.9
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-cc-ceeecCcEEEEEC-C
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KL-GLSAEHGYFTRWS-K 660 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l-~liaenG~~I~~~-~ 660 (854)
++|+|+|||||||++ +++.++++++++|++ ++.|+.|++||||+...+..++..++ .. +++++||+.+... +
T Consensus 1 mikli~~DlDGTLl~---~~~~i~~~~~~al~~--~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~ 75 (268)
T 1nf2_A 1 MYRVFVFDLDGTLLN---DNLEISEKDRRNIEK--LSRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEE 75 (268)
T ss_dssp CBCEEEEECCCCCSC---TTSCCCHHHHHHHHH--HTTTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTT
T ss_pred CccEEEEeCCCcCCC---CCCccCHHHHHHHHH--HhCCCEEEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECCCC
Confidence 379999999999999 788999999999999 58899999999999999988876543 22 6899999999884 3
Q ss_pred CcceEEccccccchHHHHHHHHHHHHhcc--------CCcceEeccc---------ceEEEe-eccC---C--Ccc----
Q 003042 661 NSAWEICSLTRDFDWKEIAEPVMKLYTET--------TDGSFIEDKE---------TAIVWH-HQHA---D--PHF---- 713 (854)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~v~~~~~~y~~~--------~~g~~ie~k~---------~~l~~~-~~~~---d--~~~---- 713 (854)
...+...++ .+ .++++++.+.+. ..+.+..... ..+... +... . ...
T Consensus 76 ~~i~~~~l~---~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~ 149 (268)
T 1nf2_A 76 GVILNEKIP---PE---VAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLL 149 (268)
T ss_dssp EEEEECCBC---HH---HHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEE
T ss_pred CEEEecCCC---HH---HHHHHHHHHHhCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCHHHhcccCCceEEE
Confidence 333332222 12 222222222211 1122221110 000000 0000 0 000
Q ss_pred ---chhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhh
Q 003042 714 ---GSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIE 790 (854)
Q Consensus 714 ---~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag 790 (854)
......++.+.+.+.+......+.++..++||+|++++|+.+++.+++++ |++++++++|||+.||++|++.+|
T Consensus 150 ~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~---~~~~~~~~~~GD~~nD~~~~~~ag 226 (268)
T 1nf2_A 150 LIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERM---NWKKEEIVVFGDNENDLFMFEEAG 226 (268)
T ss_dssp EECCHHHHHHHHHHHHHHHTTTSEEEEEETTEEEEECTTCCHHHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHTTCS
T ss_pred EECCHHHHHHHHHHHHHHhcCCEEEEEecCceEEEeCCCCChHHHHHHHHHHc---CCCHHHeEEEcCchhhHHHHHHcC
Confidence 00123334445544454444556678889999999999999999999999 999999999999999999999998
Q ss_pred hhcCCCCCCCCccEEEEEecCCC----cccceEeCC--HhHHHHHHHHHH
Q 003042 791 QAVADPSVPGIAEVFACTVGQKP----SMAKYYLDD--TAEVINLLEGLA 834 (854)
Q Consensus 791 ~~~~~~~~~~~~~~~aV~vG~~~----s~A~y~l~~--~~eV~~~L~~l~ 834 (854)
. +|+||+.. ..|+|++++ .++|+++|+++.
T Consensus 227 ~--------------~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~~~~ 262 (268)
T 1nf2_A 227 L--------------RVAMENAIEKVKEASDIVTLTNNDSGVSYVLERIS 262 (268)
T ss_dssp E--------------EEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBC
T ss_pred C--------------EEEecCCCHHHHhhCCEEEccCCcchHHHHHHHHH
Confidence 5 68888753 569999875 567999998775
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-21 Score=225.16 Aligned_cols=298 Identities=17% Similarity=0.105 Sum_probs=204.2
Q ss_pred CeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCCh----hhhhc--CC-------------ChHHHHHHhhcCCeEee
Q 003042 192 DYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS----EIYRT--LP-------------VRDEILKSLLNSDLIGF 252 (854)
Q Consensus 192 D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~----e~~~~--lp-------------~r~eil~~ll~~dligf 252 (854)
|+|++|+++..+++.+++.+..++|+.+.+|..++.. ..+.. ++ ...-.-..+..+|.|-.
T Consensus 131 Divh~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~ 210 (485)
T 2qzs_A 131 DVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITA 210 (485)
T ss_dssp SEEEEETGGGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEE
T ss_pred CEEEeeccchhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEe
Confidence 9999999998888888764456799999999876421 11111 01 01122233456899999
Q ss_pred cCHHHHHHHHHHHHhhhCccccccCceeeEEECCeE--EEEEEeccccCchHHHhhhCC-----------chHHHHHHHH
Q 003042 253 HTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRT--VSIKILPVGIHMGQFESIMSL-----------DVTGQKVKEL 319 (854)
Q Consensus 253 ~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~--~~i~v~p~GId~~~~~~~~~~-----------~~~~~~~~~l 319 (854)
.+....+.+.+. ..|.... +. + .... .++.++|+|||.+.|.+.... +........+
T Consensus 211 ~S~~~~~~~~~~---~~~~~~~---~~--~--~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (485)
T 2qzs_A 211 VSPTYAREITEP---QFAYGME---GL--L--QQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQL 280 (485)
T ss_dssp SSHHHHHHTTSH---HHHTTCH---HH--H--HHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHH
T ss_pred cCHHHHHHHhcc---ccCcchH---HH--H--HhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHH
Confidence 888766654321 0110000 00 0 0000 246789999999887543210 0011123456
Q ss_pred HHHcC-----CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhh
Q 003042 320 KEKFD-----GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINL 394 (854)
Q Consensus 320 ~~~~~-----~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~ 394 (854)
++++. ++++|+++||+++.||+..+++|++++.+ ++ +.|+++|.. + .++.+++++++.+.+
T Consensus 281 r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~----~~l~ivG~g-----~--~~~~~~l~~~~~~~~- 346 (485)
T 2qzs_A 281 QIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QG----GQLALLGAG-----D--PVLQEGFLAAAAEYP- 346 (485)
T ss_dssp HHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TT----CEEEEEEEE-----C--HHHHHHHHHHHHHST-
T ss_pred HHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CC----cEEEEEeCC-----c--hHHHHHHHHHHHhCC-
Confidence 66652 67899999999999999999999999876 33 458888742 2 134555666665532
Q ss_pred ccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEec
Q 003042 395 NFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSE 474 (854)
Q Consensus 395 ~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se 474 (854)
..|+++.+. +.+++..+|+.||++|+||..||||++++|||+| |.|+|+|+
T Consensus 347 -------~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~---------------------G~PvI~s~ 397 (485)
T 2qzs_A 347 -------GQVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKY---------------------GTLPLVRR 397 (485)
T ss_dssp -------TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH---------------------TCEEEEES
T ss_pred -------CcEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHC---------------------CCCEEECC
Confidence 236667776 7888899999999999999999999999999999 45999999
Q ss_pred CccccccCC------------CceEeCCCCHHHHHHHHHHHhc--CCHHHHHHHHHHHhccccccChHHHHHHHHHHHHH
Q 003042 475 FIGCSPSLS------------GAIRVNPWNVDAVADAMDSALQ--MENQEKILRHEKHYKYISSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 475 ~~G~~~~l~------------~ai~vnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 540 (854)
.+|..+.+. .|++++|.|++++|++|.+++. ..++.++...++.++ ..+++...++++++-+++
T Consensus 398 ~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~ 475 (485)
T 2qzs_A 398 TGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYR 475 (485)
T ss_dssp SHHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHH
T ss_pred CCCccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHHH
Confidence 999888873 4799999999999999999994 233444444434332 679999999999888877
Q ss_pred HHHh
Q 003042 541 ACRD 544 (854)
Q Consensus 541 ~~~~ 544 (854)
+..+
T Consensus 476 ~~~~ 479 (485)
T 2qzs_A 476 LKLE 479 (485)
T ss_dssp HC--
T ss_pred hhhh
Confidence 6544
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-22 Score=235.54 Aligned_cols=306 Identities=13% Similarity=0.049 Sum_probs=211.4
Q ss_pred cCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhh-hhcC----C---------ChHHH-HHHhhcCCeEe
Q 003042 187 INPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEI-YRTL----P---------VRDEI-LKSLLNSDLIG 251 (854)
Q Consensus 187 ~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~-~~~l----p---------~r~ei-l~~ll~~dlig 251 (854)
.+| |+|++|.++..+++.++.+. .++|+.+++|..++...- +... | .+..+ -..+-.+|.|-
T Consensus 119 ~~~--Divh~~~~~~~~~~~~~~~~-~~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 195 (499)
T 2r60_A 119 KFP--QVVTTHYGDGGLAGVLLKNI-KGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKII 195 (499)
T ss_dssp CCC--SEEEEEHHHHHHHHHHHHHH-HCCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEE
T ss_pred CCC--CEEEEcCCcchHHHHHHHHh-cCCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEE
Confidence 356 89999998766666666544 368899999987542211 0000 0 01111 12344689888
Q ss_pred ecCHHHHHHHHHHHHhhhC-ccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc-------
Q 003042 252 FHTFDYARHFLSSCSRMLG-LNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF------- 323 (854)
Q Consensus 252 f~t~~~~~~Fl~~~~r~lg-~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~------- 323 (854)
+.+...++.+.+. ..+| +... ....++.++|+|||.+.|.... .......+++++
T Consensus 196 ~~S~~~~~~~~~~--~~~g~~~~~-----------~~~~ki~vi~ngvd~~~~~~~~----~~~~~~~~r~~~~~~~~~~ 258 (499)
T 2r60_A 196 VSTSQERFGQYSH--DLYRGAVNV-----------EDDDKFSVIPPGVNTRVFDGEY----GDKIKAKITKYLERDLGSE 258 (499)
T ss_dssp ESSHHHHHHTTTS--GGGTTTCCT-----------TCGGGEEECCCCBCTTTSSSCC----CHHHHHHHHHHHHHHSCGG
T ss_pred ECCHHHHHHHHhh--hcccccccc-----------cCCCCeEEECCCcChhhcCccc----hhhhHHHHHHHhccccccc
Confidence 8887655544320 0012 1000 0112567899999998775321 111223344443
Q ss_pred -CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCC----h---hHHHHHHHHHHHHHHHHhhc
Q 003042 324 -DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSS----G---KDVQDLLSDTNRIAEEINLN 395 (854)
Q Consensus 324 -~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~----~---~~~~~l~~~v~~~v~~In~~ 395 (854)
.++++|+++||+++.||+..+++|+.++.+++|+. +.|+++|... +. + ....++.+++++++.+.
T Consensus 259 ~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~~l~i~G~~~-~~~~~y~~l~~~~~~y~~~l~~~~~~~--- 331 (499)
T 2r60_A 259 RMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKA---NLVLTLRGIE-NPFEDYSRAGQEEKEILGKIIELIDNN--- 331 (499)
T ss_dssp GTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHC---EEEEEESSCS-BTTTBCTTSCHHHHHHHHHHHHHHHHT---
T ss_pred CCCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCc---eEEEEECCCC-CcccccccccccchHHHHHHHHHHHhc---
Confidence 37789999999999999999999999998876642 3466666421 11 0 11234466666666663
Q ss_pred cCCCCCccEEEEcCCCChhhHHHHHHhC----cEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEE
Q 003042 396 FGKPGYEPIVIIKEPLSTQDKVPYYAIA----ECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVII 471 (854)
Q Consensus 396 ~~~~~~~pv~~~~~~~~~~el~aly~~A----Dv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV 471 (854)
+..+.+.+.|.++.+++..+|+.| |++|+||..||||++++|||+| |.|+|
T Consensus 332 ----~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~---------------------G~PvI 386 (499)
T 2r60_A 332 ----DCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMAS---------------------GLPAV 386 (499)
T ss_dssp ----TCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHT---------------------TCCEE
T ss_pred ----CCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHc---------------------CCCEE
Confidence 334445567789999999999999 9999999999999999999999 45999
Q ss_pred EecCccccccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccc-cChHHHHHHHHHHHHHHHHhc
Q 003042 472 VSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSIDQDLERACRDH 545 (854)
Q Consensus 472 ~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~~~~ 545 (854)
+|+.+|..+.+. .|++++|.|++++|++|.++++.+ +.++...++.++++.+ +++..+++++++.++++....
T Consensus 387 ~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~ 463 (499)
T 2r60_A 387 VTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFESE-ETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRK 463 (499)
T ss_dssp EESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHHSCH-HHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC-
T ss_pred EecCCCHHHHhcCCceEEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 999988888883 389999999999999999999855 4555566666777766 999999999999998887654
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.8e-22 Score=222.27 Aligned_cols=287 Identities=18% Similarity=0.181 Sum_probs=208.8
Q ss_pred HHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHH-HhhcCCeEeecCHHHHHHH
Q 003042 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILK-SLLNSDLIGFHTFDYARHF 261 (854)
Q Consensus 183 i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~-~ll~~dligf~t~~~~~~F 261 (854)
+++..+| |+||+|+...+.+...+.++....++.+.+|...+ .+...+....+.+ .+-.+|.|-+.+....+.+
T Consensus 81 ~~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~---~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~ 155 (394)
T 3okp_A 81 IIREREI--DNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV---GWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRF 155 (394)
T ss_dssp HHHHTTC--SEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH---HHTTSHHHHHHHHHHHHHCSEEEESCHHHHHHH
T ss_pred HHHhcCC--CEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh---hhhhcchhhHHHHHHHHhCCEEEEcCHHHHHHH
Confidence 3445566 89999987766555444444433469999995432 1222233333333 3456899999988776666
Q ss_pred HHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCcccc
Q 003042 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLF 338 (854)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~~ 338 (854)
.+.. + ...++.++|+|||...|... .......+++++ .++++|+++||+++.
T Consensus 156 ~~~~----~----------------~~~~~~vi~ngv~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~ 210 (394)
T 3okp_A 156 KSAF----G----------------SHPTFEHLPSGVDVKRFTPA-----TPEDKSATRKKLGFTDTTPVIACNSRLVPR 210 (394)
T ss_dssp HHHH----C----------------SSSEEEECCCCBCTTTSCCC-----CHHHHHHHHHHTTCCTTCCEEEEESCSCGG
T ss_pred HHhc----C----------------CCCCeEEecCCcCHHHcCCC-----CchhhHHHHHhcCCCcCceEEEEEeccccc
Confidence 5421 1 11267889999999877421 122345566776 355899999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHH
Q 003042 339 KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVP 418 (854)
Q Consensus 339 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~a 418 (854)
||+..+++|++++.+++|+++ |+++|. ++..+.+++. +. +..+.+.+.|.++.+++..
T Consensus 211 Kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~l~~~----~~---------~~~~~v~~~g~~~~~~~~~ 268 (394)
T 3okp_A 211 KGQDSLIKAMPQVIAARPDAQ----LLIVGS-----GRYESTLRRL----AT---------DVSQNVKFLGRLEYQDMIN 268 (394)
T ss_dssp GCHHHHHHHHHHHHHHSTTCE----EEEECC-----CTTHHHHHHH----TG---------GGGGGEEEEESCCHHHHHH
T ss_pred cCHHHHHHHHHHHHhhCCCeE----EEEEcC-----chHHHHHHHH----Hh---------cccCeEEEcCCCCHHHHHH
Confidence 999999999999999998876 777773 3333344333 21 1223455667899999999
Q ss_pred HHHhCcEEEEccCc-------cCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC--CceEeC
Q 003042 419 YYAIAECCVVNCVR-------DGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--GAIRVN 489 (854)
Q Consensus 419 ly~~ADv~vv~S~~-------EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~vn 489 (854)
+|+.||++|+||.. ||||++++|||+| |.|+|+|+.+|..+.+. .|++++
T Consensus 269 ~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~---------------------G~PvI~~~~~~~~e~i~~~~g~~~~ 327 (394)
T 3okp_A 269 TLAAADIFAMPARTRGGGLDVEGLGIVYLEAQAC---------------------GVPVIAGTSGGAPETVTPATGLVVE 327 (394)
T ss_dssp HHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHT---------------------TCCEEECSSTTGGGGCCTTTEEECC
T ss_pred HHHhCCEEEecCccccccccccccCcHHHHHHHc---------------------CCCEEEeCCCChHHHHhcCCceEeC
Confidence 99999999999999 9999999999999 45999999998888884 489999
Q ss_pred CCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccc-cChHHHHHHHHHHHHHHHH
Q 003042 490 PWNVDAVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSIDQDLERACR 543 (854)
Q Consensus 490 P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~~ 543 (854)
|.|+++++++|.+++..+ +.++...++.++++.+ +++..+++++++.+++...
T Consensus 328 ~~d~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r 381 (394)
T 3okp_A 328 GSDVDKLSELLIELLDDP-IRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPR 381 (394)
T ss_dssp TTCHHHHHHHHHHHHTCH-HHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC
T ss_pred CCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcc
Confidence 999999999999999855 4555556666777665 8999999999988876543
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=99.88 E-value=7.9e-23 Score=215.36 Aligned_cols=207 Identities=16% Similarity=0.203 Sum_probs=132.5
Q ss_pred hcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcC-C--cccceeecCcEEEEE
Q 003042 582 KTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG-V--EKLGLSAEHGYFTRW 658 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~-~--~~l~liaenG~~I~~ 658 (854)
.|++|+|++|+||||++ +++.++++++++|++| +++ +.|+|||||+...+.+.++. + ...+++++||+.|+.
T Consensus 3 ~~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~I~~NGa~i~~ 77 (246)
T 2amy_A 3 APGPALCLFDVDGTLTA---PRQKITKEMDDFLQKL-RQK-IKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYK 77 (246)
T ss_dssp -CCSEEEEEESBTTTBC---TTSCCCHHHHHHHHHH-TTT-SEEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEE
T ss_pred CCCceEEEEECCCCcCC---CCcccCHHHHHHHHHH-HhC-CeEEEEcCCCHHHHHHHhccccccccCEEEECCCcEEEe
Confidence 46789999999999999 7889999999999999 778 99999999999887777741 1 113578999999988
Q ss_pred CCCcceEEcc----ccccc-hHHHHHHHH-HHHHhccCCcceEecccceEEEe-e-ccCCC----ccch-----hhHHHH
Q 003042 659 SKNSAWEICS----LTRDF-DWKEIAEPV-MKLYTETTDGSFIEDKETAIVWH-H-QHADP----HFGS-----CQAKEL 721 (854)
Q Consensus 659 ~~~~~~~~~~----~~~~~-~~~~~v~~~-~~~y~~~~~g~~ie~k~~~l~~~-~-~~~d~----~~~~-----~~~~el 721 (854)
.+...|...+ +.... .+.+.+++. ........++.+.+.......+. + +.... .+.. ....++
T Consensus 78 ~~~~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (246)
T 2amy_A 78 DGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKF 157 (246)
T ss_dssp TTEEEEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHHHH
T ss_pred CCcEEEeeecccccCHHHHHHHHHHHHhcCceEEEecCCceeEecccceeehhhhcCcCchhhhhhheeecCCHHHHHHH
Confidence 6555555432 11111 111111111 00011122344443322222111 1 11100 0000 011233
Q ss_pred HHHHHHHhcCCCEEE-EEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeC----CcccHHHHHHhhhhcCCC
Q 003042 722 LDHLENVLANEPVVV-KRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGD----DRSDEDMFESIEQAVADP 796 (854)
Q Consensus 722 ~~~l~~~l~~~~~~v-~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD----s~ND~~Mf~~ag~~~~~~ 796 (854)
.+.+.+.+....+.+ .++..++||+|+++|||.|++.+ + |+++++++|||| +.||++||+.+|.
T Consensus 158 ~~~l~~~~~~~~~~~~~s~~~~leI~~~~~~Kg~al~~l---~---~i~~~~viafGD~~~~~~ND~~Ml~~a~~----- 226 (246)
T 2amy_A 158 VADLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHV---E---NDGYKTIYFFGDKTMPGGNDHEIFTDPRT----- 226 (246)
T ss_dssp HHHHHHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGT---T---TSCCSEEEEEECSCC---CCCHHHHCTTE-----
T ss_pred HHHHHHhcCCCcEEEEEcCCcEEEEecCCCchHHHHHHH---h---CCCHHHEEEECCCCCCCCCcHHHHHhCCc-----
Confidence 344544444323444 45788999999999999999999 6 999999999999 9999999999875
Q ss_pred CCCCCccEEEEEecCC
Q 003042 797 SVPGIAEVFACTVGQK 812 (854)
Q Consensus 797 ~~~~~~~~~aV~vG~~ 812 (854)
.+++||++
T Consensus 227 --------ag~av~Na 234 (246)
T 2amy_A 227 --------MGYSVTAP 234 (246)
T ss_dssp --------EEEECSSH
T ss_pred --------ceEEeeCC
Confidence 47888875
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.88 E-value=3e-22 Score=208.92 Aligned_cols=215 Identities=16% Similarity=0.143 Sum_probs=151.4
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECCC
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKN 661 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~~ 661 (854)
|++|+|+||+||||++ +.+.+++.+.++|+++ +++|+.|+++|||+...+..++..+. ...++++||+.+...+.
T Consensus 1 Mm~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~ 76 (231)
T 1wr8_A 1 MKIKAISIDIDGTITY---PNRMIHEKALEAIRRA-ESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKK 76 (231)
T ss_dssp -CCCEEEEESTTTTBC---TTSCBCHHHHHHHHHH-HHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTE
T ss_pred CceeEEEEECCCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCE
Confidence 3579999999999999 7889999999999999 88999999999999999888775442 23578999998877443
Q ss_pred cceEEccccccchHHHHHHHHHHHHhccCCcceEec-ccc---eEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEE
Q 003042 662 SAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIED-KET---AIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVK 737 (854)
Q Consensus 662 ~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~-k~~---~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~ 737 (854)
..|...+ +.++++++.+.+..+|..... ... .+.+. .+.. ..+..+.+.+.+......+
T Consensus 77 ~~~~~~l--------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~~~~~~~~~~~~~~~~~- 139 (231)
T 1wr8_A 77 RIFLASM--------DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIM----RETI----NVETVREIINELNLNLVAV- 139 (231)
T ss_dssp EEESCCC--------SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEEC----TTTS----CHHHHHHHHHHTTCSCEEE-
T ss_pred EEEeccH--------HHHHHHHHHHHHhCCCceEEecCCCceeeEEEE----CCCC----CHHHHHHHHHhcCCcEEEE-
Confidence 3333222 223333333331223332210 000 01110 1010 1122333333344434444
Q ss_pred EcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----C
Q 003042 738 RGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----P 813 (854)
Q Consensus 738 ~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~ 813 (854)
++..++|+.|++++|+.+++.+++++ |++++++++|||+.||++|++.+|. +|+||+. +
T Consensus 140 ~~~~~~ei~~~~~~K~~~~~~~~~~~---~~~~~~~~~iGD~~nD~~~~~~ag~--------------~v~~~~~~~~~~ 202 (231)
T 1wr8_A 140 DSGFAIHVKKPWINKGSGIEKASEFL---GIKPKEVAHVGDGENDLDAFKVVGY--------------KVAVAQAPKILK 202 (231)
T ss_dssp ECSSCEEEECTTCCHHHHHHHHHHHH---TSCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHHHH
T ss_pred ecCcEEEEecCCCChHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcCC--------------eEEecCCCHHHH
Confidence 88899999999999999999999999 9999999999999999999999985 4667765 3
Q ss_pred cccceEeCCH--hHHHHHHHHHHh
Q 003042 814 SMAKYYLDDT--AEVINLLEGLAT 835 (854)
Q Consensus 814 s~A~y~l~~~--~eV~~~L~~l~~ 835 (854)
..|+|++++. ++|.++|+++..
T Consensus 203 ~~a~~v~~~~~e~Gv~~~l~~~~~ 226 (231)
T 1wr8_A 203 ENADYVTKKEYGEGGAEAIYHILE 226 (231)
T ss_dssp TTCSEECSSCHHHHHHHHHHHHHH
T ss_pred hhCCEEecCCCcchHHHHHHHHHH
Confidence 5799999764 569999998764
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4e-22 Score=225.30 Aligned_cols=286 Identities=15% Similarity=0.169 Sum_probs=201.7
Q ss_pred HhcCCCCCeEEEeCcccchHHHHHHhc--cC-CCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCC--eEeecCHHHHH
Q 003042 185 EVINPDEDYVWIHDYHLMVLPSFLRKR--FH-RVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSD--LIGFHTFDYAR 259 (854)
Q Consensus 185 ~~~~~~~D~vwihDyhl~llp~~lr~~--~~-~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~d--ligf~t~~~~~ 259 (854)
...+| |+|++|.+...+ ..++... .| ..++...+|...+...-. +-..+-.+| .|-+.+....+
T Consensus 78 ~~~~~--Div~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ii~~S~~~~~ 146 (413)
T 3oy2_A 78 DVHKP--DIVMIYNDPIVI-GNYLLAMGKCSHRTKIVLYVDLVSKNIREN--------LWWIFSHPKVVGVMAMSKCWIS 146 (413)
T ss_dssp HHHCC--SEEEEEECHHHH-HHHHHHGGGCCSCCEEEEEECCCSBSCCGG--------GGGGGGCTTEEEEEESSTHHHH
T ss_pred HhcCC--CEEEEcchHHHH-HHHHHHhccCCCCCceeeeccccchhhHHH--------HHHHHhccCCceEEEcCHHHHH
Confidence 44567 899999444333 3333222 22 356677777554432111 212233477 88888876666
Q ss_pred HHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---C--CCEEEEEecC
Q 003042 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---D--GKIVILGVDD 334 (854)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~--~~~iil~VdR 334 (854)
.+.+ +|+ ..++.++|+|||...|. ..++++ . ++++|+++||
T Consensus 147 ~~~~-----~~~----------------~~~~~vi~ngvd~~~~~-------------~~~~~~~~~~~~~~~~il~vGr 192 (413)
T 3oy2_A 147 DICN-----YGC----------------KVPINIVSHFVDTKTIY-------------DARKLVGLSEYNDDVLFLNMNR 192 (413)
T ss_dssp HHHH-----TTC----------------CSCEEECCCCCCCCCCT-------------THHHHTTCGGGTTSEEEECCSC
T ss_pred HHHH-----cCC----------------CCceEEeCCCCCHHHHH-------------HHHHhcCCCcccCceEEEEcCC
Confidence 5543 222 12577899999998761 122233 2 6889999999
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChh
Q 003042 335 MDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQ 414 (854)
Q Consensus 335 ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~ 414 (854)
+.+.||+..+++|+.++.+++|+++ |+++|....... .++++.+++++.+.+..-...-+..++++.|.++.+
T Consensus 193 ~~~~Kg~~~li~a~~~l~~~~~~~~----l~ivG~g~~~~~---~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~ 265 (413)
T 3oy2_A 193 NTARKRLDIYVLAAARFISKYPDAK----VRFLCNSHHESK---FDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDE 265 (413)
T ss_dssp SSGGGTHHHHHHHHHHHHHHCTTCC----EEEEEECCTTCS---CCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHH
T ss_pred CchhcCcHHHHHHHHHHHHhCCCcE----EEEEeCCcccch---hhHHHHHHHHHHHcCcccccccccceeeccCcCCHH
Confidence 9999999999999999999999987 887875432111 124455555555533211000001268889999999
Q ss_pred hHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCCC----------
Q 003042 415 DKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSG---------- 484 (854)
Q Consensus 415 el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~---------- 484 (854)
++..+|+.||++|+||..||||++++|||+| |.|+|+|..+|..+.+.+
T Consensus 266 ~~~~~~~~adv~v~pS~~E~~~~~~lEAma~---------------------G~PvI~s~~~g~~e~v~~~~~~~i~~~~ 324 (413)
T 3oy2_A 266 RVDMMYNACDVIVNCSSGEGFGLCSAEGAVL---------------------GKPLIISAVGGADDYFSGDCVYKIKPSA 324 (413)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCHHHHHHHTT---------------------TCCEEEECCHHHHHHSCTTTSEEECCCE
T ss_pred HHHHHHHhCCEEEeCCCcCCCCcHHHHHHHc---------------------CCCEEEcCCCChHHHHccCccccccccc
Confidence 9999999999999999999999999999999 459999999998888843
Q ss_pred --------ce--EeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccc-cccChHHHHHHHHHHHHHHHHhc
Q 003042 485 --------AI--RVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLERACRDH 545 (854)
Q Consensus 485 --------ai--~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~~~~~ 545 (854)
|+ +++|.|++++|++| +++..+ +.++...++.++++ ..+++..+++++++-++++.++.
T Consensus 325 ~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 325 WISVDDRDGIGGIEGIIDVDDLVEAF-TFFKDE-KNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp EEECTTTCSSCCEEEECCHHHHHHHH-HHTTSH-HHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred ccccccccCcceeeCCCCHHHHHHHH-HHhcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 77 99999999999999 998854 45556666667776 56899999999999998876543
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-22 Score=216.63 Aligned_cols=231 Identities=15% Similarity=0.103 Sum_probs=130.2
Q ss_pred hcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcc--cceeecCcEEEEEC
Q 003042 582 KTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEK--LGLSAEHGYFTRWS 659 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~--l~liaenG~~I~~~ 659 (854)
.|++|+|++||||||++ +++.++++++++|++| +++|+.|+|||||+...+..++..+.- .+++++||+.|+..
T Consensus 6 ~m~~~li~~DlDGTLl~---~~~~~~~~~~~~l~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~ 81 (275)
T 1xvi_A 6 IQQPLLVFSDLDGTLLD---SHSYDWQPAAPWLTRL-REANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLA 81 (275)
T ss_dssp CCCCEEEEEECTTTTSC---SSCCSCCTTHHHHHHH-HHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECC
T ss_pred ccCceEEEEeCCCCCCC---CCCcCCHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEec
Confidence 36789999999999999 6667778899999999 789999999999999999998866532 26899999999733
Q ss_pred C-Cc------ceEEccccccchHHHHHHHHHHHHh---ccCCcceEec--ccceEEEe---e---ccCCCccchhhHHHH
Q 003042 660 K-NS------AWEICSLTRDFDWKEIAEPVMKLYT---ETTDGSFIED--KETAIVWH---H---QHADPHFGSCQAKEL 721 (854)
Q Consensus 660 ~-~~------~~~~~~~~~~~~~~~~v~~~~~~y~---~~~~g~~ie~--k~~~l~~~---~---~~~d~~~~~~~~~el 721 (854)
+ .. .+...++.. .+.+.+..+.+.+. ....+.+.+. +...+... + +............+.
T Consensus 82 ~~~~~~~~~~~~~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (275)
T 1xvi_A 82 EQWQEIDGFPRIISGISHG--EISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDER 159 (275)
T ss_dssp TTCTTSTTTTEEECSSCHH--HHHHHHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHH
T ss_pred CcccccCceEEEecCCCHH--HHHHHHHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCHHH
Confidence 2 11 233332211 12222221111110 0000000000 00000000 0 000000000001122
Q ss_pred HHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCC-CCCCe--EEEEeCCcccHHHHHHhhhhcCCCCC
Q 003042 722 LDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRG-KSPDF--VLCIGDDRSDEDMFESIEQAVADPSV 798 (854)
Q Consensus 722 ~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~g-i~~d~--vlaiGDs~ND~~Mf~~ag~~~~~~~~ 798 (854)
.+.+.+.+....+.+..+..++||+|++++||.|++.+++++ | +++++ +++|||+.||++||+.+|.
T Consensus 160 ~~~~~~~l~~~~~~~~~~~~~leI~~~~~~K~~~l~~l~~~~---~~~~~~~~~~~~~GD~~nD~~m~~~ag~------- 229 (275)
T 1xvi_A 160 MAQFTARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATY---QQLSGKRPTTLGLGDGPNDAPLLEVMDY------- 229 (275)
T ss_dssp HHHHHHHHHHTTEEEEECSSCEEEEETTCCHHHHHHHHHHHH---HHHHSSCCEEEEEESSGGGHHHHHTSSE-------
T ss_pred HHHHHHHHHhhCeEEEECCceEEEecCCCCHHHHHHHHHHHh---hhcccccCcEEEECCChhhHHHHHhCCc-------
Confidence 233333333223556667788999999999999999999999 8 88999 9999999999999999985
Q ss_pred CCCccEEEEEecCCC----c-----ccc-eEeC--CHhHHHHHHHHHHh
Q 003042 799 PGIAEVFACTVGQKP----S-----MAK-YYLD--DTAEVINLLEGLAT 835 (854)
Q Consensus 799 ~~~~~~~aV~vG~~~----s-----~A~-y~l~--~~~eV~~~L~~l~~ 835 (854)
+|+||+.. . .|+ |+++ +.++|++.|+++..
T Consensus 230 -------~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~~~l~ 271 (275)
T 1xvi_A 230 -------AVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLDHFFS 271 (275)
T ss_dssp -------EEECCCCC----------------------------------
T ss_pred -------eEEecCCCccchhhccccCCceeEccCCCchHHHHHHHHHHH
Confidence 57777642 1 267 7775 46789999998764
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-21 Score=224.20 Aligned_cols=295 Identities=14% Similarity=0.128 Sum_probs=205.5
Q ss_pred cCCCCCeEEEeCcccchHHHHHHhc-cCCCeEEEEecCCCCCh----hhhhc--CCC-------------hHHHHHHhhc
Q 003042 187 INPDEDYVWIHDYHLMVLPSFLRKR-FHRVKVGFFLHSPFPSS----EIYRT--LPV-------------RDEILKSLLN 246 (854)
Q Consensus 187 ~~~~~D~vwihDyhl~llp~~lr~~-~~~~~i~~flH~pfP~~----e~~~~--lp~-------------r~eil~~ll~ 246 (854)
.+| |+|++|+++..+++.++++. ..++|+.+.+|..++.. ..+.. +|. ..-.-..+..
T Consensus 129 ~~~--DiIh~~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (485)
T 1rzu_A 129 WRP--DMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQT 206 (485)
T ss_dssp CCC--SEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHH
T ss_pred CCC--CEEEecccchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhh
Confidence 345 99999999888888888764 35789999999876421 11111 110 1122233456
Q ss_pred CCeEeecCHHHHHHHHHH-HH----hhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCC-----------c
Q 003042 247 SDLIGFHTFDYARHFLSS-CS----RMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSL-----------D 310 (854)
Q Consensus 247 ~dligf~t~~~~~~Fl~~-~~----r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~-----------~ 310 (854)
+|.|-..+....+.+.+. .. .+++.. ..++.++|+|||.+.|.+.... +
T Consensus 207 ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~---------------~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~ 271 (485)
T 1rzu_A 207 ATALSTVSPSYAEEILTAEFGMGLEGVIGSR---------------AHVLHGIVNGIDADVWNPATDHLIHDNYSAANLK 271 (485)
T ss_dssp CSEEEESCHHHHHHTTSHHHHTTCHHHHHTT---------------GGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCT
T ss_pred cCEEEecCHhHHHHHhccccCcchHHHHHhh---------------cCCceEEcCCCcccccCCcccccccccccccchh
Confidence 999998888776655431 00 001000 1246789999999887543210 0
Q ss_pred hHHHHHHHHHHHcC---C-CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHH
Q 003042 311 VTGQKVKELKEKFD---G-KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTN 386 (854)
Q Consensus 311 ~~~~~~~~l~~~~~---~-~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~ 386 (854)
........+++++. + +++|+++||+++.||+..+++|+.++.+ ++ +.|+++|.. + ..++++++
T Consensus 272 ~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~----~~l~ivG~g-----~--~~~~~~l~ 338 (485)
T 1rzu_A 272 NRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LG----GRLVVLGAG-----D--VALEGALL 338 (485)
T ss_dssp THHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TT----CEEEEEECB-----C--HHHHHHHH
T ss_pred hHHHhHHHHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cC----ceEEEEeCC-----c--hHHHHHHH
Confidence 11112345566652 2 6799999999999999999999999876 33 458888842 2 13455566
Q ss_pred HHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCC
Q 003042 387 RIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQK 466 (854)
Q Consensus 387 ~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~ 466 (854)
+++.+.+ ..|+++.+. +.+++..+|+.||++|+||.+||||++++|||+|
T Consensus 339 ~~~~~~~--------~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~--------------------- 388 (485)
T 1rzu_A 339 AAASRHH--------GRVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRY--------------------- 388 (485)
T ss_dssp HHHHHTT--------TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH---------------------
T ss_pred HHHHhCC--------CcEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHC---------------------
Confidence 6665532 236667776 7888899999999999999999999999999999
Q ss_pred CceEEEecCccccccCC------------CceEeCCCCHHHHHHHHHHHhc--CCHHHHHHHHHHHhccccccChHHHHH
Q 003042 467 KSVIIVSEFIGCSPSLS------------GAIRVNPWNVDAVADAMDSALQ--MENQEKILRHEKHYKYISSHDVAYWAK 532 (854)
Q Consensus 467 ~g~lV~Se~~G~~~~l~------------~ai~vnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~ 532 (854)
|.|+|+|..+|..+.+. .|++++|.|++++|++|.+++. ..++.++...++.++ ..+++...++
T Consensus 389 G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~ 466 (485)
T 1rzu_A 389 GCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAG 466 (485)
T ss_dssp TCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHH
T ss_pred CCCEEEeCCCChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HhCChHHHHH
Confidence 45999999999888883 4799999999999999999994 234444444444443 6799999999
Q ss_pred HHHHHHHHHHH
Q 003042 533 SIDQDLERACR 543 (854)
Q Consensus 533 ~~l~~l~~~~~ 543 (854)
++++-++++..
T Consensus 467 ~~~~~y~~~~~ 477 (485)
T 1rzu_A 467 LYAALYSQLIS 477 (485)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHhhC
Confidence 99888877643
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3e-22 Score=212.73 Aligned_cols=222 Identities=14% Similarity=0.182 Sum_probs=147.9
Q ss_pred eEEEEecCCCCCCCCCCCCC-CCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc----ccceeecCcEEEEECC
Q 003042 586 RLILLDYDGTVMPQTSEDKR-PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE----KLGLSAEHGYFTRWSK 660 (854)
Q Consensus 586 klI~~DlDGTLl~~~~~~~~-is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~----~l~liaenG~~I~~~~ 660 (854)
|+|+||+||||++ +++. +++.++++|+++ ++.|+.++++|||+ ..+..++..++ .-+++++||+.+...+
T Consensus 3 kli~~DlDGTLl~---~~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~ 77 (261)
T 2rbk_A 3 KALFFDIDGTLVS---FETHRIPSSTIEALEAA-HAKGLKIFIATGRP-KAIINNLSELQDRNLIDGYITMNGAYCFVGE 77 (261)
T ss_dssp CEEEECSBTTTBC---TTTSSCCHHHHHHHHHH-HHTTCEEEEECSSC-GGGCCSCHHHHHTTCCCEEEEGGGTEEEETT
T ss_pred cEEEEeCCCCCcC---CCCCcCCHHHHHHHHHH-HHCCCEEEEECCCh-HHHHHHHHHhCcccccCeEEEeCCEEEEECC
Confidence 8999999999999 7777 999999999999 78999999999999 88887765443 2257899999998754
Q ss_pred CcceEEccccccchHHHHHHHHHHHH-----hccCCcceEecccceEE-EeeccC---------------CCcc--chhh
Q 003042 661 NSAWEICSLTRDFDWKEIAEPVMKLY-----TETTDGSFIEDKETAIV-WHHQHA---------------DPHF--GSCQ 717 (854)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~v~~~~~~y-----~~~~~g~~ie~k~~~l~-~~~~~~---------------d~~~--~~~~ 717 (854)
...+...++.. ...+.++ .++.+ .....+.+.+.....+. .++... .+-+ ....
T Consensus 78 ~~i~~~~l~~~--~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 154 (261)
T 2rbk_A 78 EVIYKSAIPQE--EVKAMAA-FCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFI 154 (261)
T ss_dssp EEEEECCCCHH--HHHHHHH-HHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECC
T ss_pred EEEEecCCCHH--HHHHHHH-HHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEEEEe
Confidence 44444333211 1122221 11111 00111222221100000 011100 0000 0000
Q ss_pred HHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCC
Q 003042 718 AKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPS 797 (854)
Q Consensus 718 ~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~ 797 (854)
..+....+.+.+.+ ...+.++..++||+|++++|+.+++.+++++ |++++++++|||+.||++|++.+|.
T Consensus 155 ~~~~~~~~~~~~~~-~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~---~~~~~~~~~iGD~~nD~~~~~~ag~------ 224 (261)
T 2rbk_A 155 TEEEEKEVLPSIPT-CEIGRWYPAFADVTAKGDTKQKGIDEIIRHF---GIKLEETMSFGDGGNDISMLRHAAI------ 224 (261)
T ss_dssp CHHHHHHHGGGSTT-CEEECSSTTCCEEESTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE------
T ss_pred CHHHHHHHHHhcCC-eEEEEecCCeEEecCCCCChHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcCc------
Confidence 11122223333433 3444567789999999999999999999999 9999999999999999999999985
Q ss_pred CCCCccEEEEEecCC----CcccceEeCCHhH--HHHHHHHH
Q 003042 798 VPGIAEVFACTVGQK----PSMAKYYLDDTAE--VINLLEGL 833 (854)
Q Consensus 798 ~~~~~~~~aV~vG~~----~s~A~y~l~~~~e--V~~~L~~l 833 (854)
+|+||+. +..|+|++++.++ |.++|+++
T Consensus 225 --------~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~~~ 258 (261)
T 2rbk_A 225 --------GVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHF 258 (261)
T ss_dssp --------EEECTTSCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred --------eEEecCccHHHHhhCCEEeccCchhhHHHHHHHh
Confidence 6788875 3679999988776 99999876
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-22 Score=210.00 Aligned_cols=213 Identities=14% Similarity=0.101 Sum_probs=148.7
Q ss_pred hcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEEC-
Q 003042 582 KTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWS- 659 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~- 659 (854)
+|++|+|++|+||||++ .++.++++++++|++| +++|+.|+++|||+...+..++..+. ..+++++||+.+...
T Consensus 2 ~mm~kli~~DlDGTLl~---~~~~i~~~~~~~l~~l-~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~ 77 (227)
T 1l6r_A 2 SHMIRLAAIDVDGNLTD---RDRLISTKAIESIRSA-EKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDND 77 (227)
T ss_dssp -CCCCEEEEEHHHHSBC---TTSCBCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTT
T ss_pred CcceEEEEEECCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCC
Confidence 35689999999999999 7888999999999999 88999999999999999988876543 225899999999863
Q ss_pred CCcc-eEEccccccchHHHHHHHHHHHHhccC--CcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEE
Q 003042 660 KNSA-WEICSLTRDFDWKEIAEPVMKLYTETT--DGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVV 736 (854)
Q Consensus 660 ~~~~-~~~~~~~~~~~~~~~v~~~~~~y~~~~--~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v 736 (854)
+... |...+ +.++++ +...+.. ...+. ... .+.+...... ....+..+.+.+.+ .+.+
T Consensus 78 ~~~i~~~~~l--------~~~~~i-~~~~~~~~~~~~~~--~~~----~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~ 138 (227)
T 1l6r_A 78 GSIKKFFSNE--------GTNKFL-EEMSKRTSMRSILT--NRW----REASTGFDID-PEDVDYVRKEAESR---GFVI 138 (227)
T ss_dssp SCEEESSCSH--------HHHHHH-HHHTTTSSCBCCGG--GGG----CSSSEEEBCC-GGGHHHHHHHHHTT---TEEE
T ss_pred CCEEEEeccH--------HHHHHH-HHHHHHhcCCcccc--ccc----eecccceEEe-cCCHHHHHHHHHhc---CEEE
Confidence 3322 32221 333333 3222100 00010 000 0000000000 01122233333333 3444
Q ss_pred EEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----
Q 003042 737 KRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK---- 812 (854)
Q Consensus 737 ~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~---- 812 (854)
.++..++||+|++++|+.+++.+++++ |++++++++|||+.||++||+.+|. +|+||+.
T Consensus 139 ~~~~~~~ei~~~~~~K~~~l~~l~~~~---~~~~~~~~~iGD~~nD~~m~~~ag~--------------~va~~n~~~~~ 201 (227)
T 1l6r_A 139 FYSGYSWHLMNRGEDKAFAVNKLKEMY---SLEYDEILVIGDSNNDMPMFQLPVR--------------KACPANATDNI 201 (227)
T ss_dssp EEETTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEECCSGGGHHHHTSSSE--------------EEECTTSCHHH
T ss_pred EecCcEEEEecCCCCHHHHHHHHHHHh---CcCHHHEEEECCcHHhHHHHHHcCc--------------eEEecCchHHH
Confidence 488999999999999999999999999 9999999999999999999999985 6778875
Q ss_pred CcccceEeCC--HhHHHHHHHHHH
Q 003042 813 PSMAKYYLDD--TAEVINLLEGLA 834 (854)
Q Consensus 813 ~s~A~y~l~~--~~eV~~~L~~l~ 834 (854)
+..|+|++.+ .++|.+.|+++.
T Consensus 202 k~~a~~v~~~~~~~Gv~~~l~~~~ 225 (227)
T 1l6r_A 202 KAVSDFVSDYSYGEEIGQIFKHFE 225 (227)
T ss_dssp HHHCSEECSCCTTHHHHHHHHHTT
T ss_pred HHhCCEEecCCCCcHHHHHHHHHh
Confidence 3578999865 577999998764
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-21 Score=220.55 Aligned_cols=283 Identities=13% Similarity=0.144 Sum_probs=198.3
Q ss_pred HHhcCCCCCeEEEeCcccchHHHHHHhcc--CCCeEEEEecCCCCChhhhhcCCChHHHHH-HhhcCCeEeecCHHHHHH
Q 003042 184 MEVINPDEDYVWIHDYHLMVLPSFLRKRF--HRVKVGFFLHSPFPSSEIYRTLPVRDEILK-SLLNSDLIGFHTFDYARH 260 (854)
Q Consensus 184 ~~~~~~~~D~vwihDyhl~llp~~lr~~~--~~~~i~~flH~pfP~~e~~~~lp~r~eil~-~ll~~dligf~t~~~~~~ 260 (854)
++..+| |+|++|..+...++.++.++. +++|+.+.+|...+ ..+..-+....+.+ .+-.+|.|-..+....+.
T Consensus 95 l~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~--~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 170 (394)
T 2jjm_A 95 AQRENL--DILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI--TVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINE 170 (394)
T ss_dssp HHHHTC--SEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH--HTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHH
T ss_pred HHHcCC--CEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc--cccCCCHHHHHHHHHHHhhCCEEEECCHHHHHH
Confidence 344577 899999876555555554433 26899999997422 11111222233333 345699999988776665
Q ss_pred HHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccc
Q 003042 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDL 337 (854)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~ 337 (854)
+.+. .+. ..++.++|+|+|++.|... + ...+++++ .++++|+++||+.+
T Consensus 171 ~~~~----~~~----------------~~~~~vi~ngv~~~~~~~~---~-----~~~~~~~~~~~~~~~~i~~~G~~~~ 222 (394)
T 2jjm_A 171 THEL----VKP----------------NKDIQTVYNFIDERVYFKR---D-----MTQLKKEYGISESEKILIHISNFRK 222 (394)
T ss_dssp HHHH----TCC----------------SSCEEECCCCCCTTTCCCC---C-----CHHHHHHTTCC---CEEEEECCCCG
T ss_pred HHHh----hCC----------------cccEEEecCCccHHhcCCc---c-----hHHHHHHcCCCCCCeEEEEeecccc
Confidence 5431 111 1256789999998877432 1 12344554 45789999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHH
Q 003042 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (854)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~ 417 (854)
.||+..+++|++.+.++ +++ .|+++|. +++.+++++. +.+ .+..+.+.+.|. .+++.
T Consensus 223 ~Kg~~~li~a~~~l~~~-~~~----~l~i~G~-----g~~~~~l~~~----~~~-------~~l~~~v~~~g~--~~~~~ 279 (394)
T 2jjm_A 223 VKRVQDVVQAFAKIVTE-VDA----KLLLVGD-----GPEFCTILQL----VKN-------LHIEDRVLFLGK--QDNVA 279 (394)
T ss_dssp GGTHHHHHHHHHHHHHS-SCC----EEEEECC-----CTTHHHHHHH----HHT-------TTCGGGBCCCBS--CSCTH
T ss_pred ccCHHHHHHHHHHHHhh-CCC----EEEEECC-----chHHHHHHHH----HHH-------cCCCCeEEEeCc--hhhHH
Confidence 99999999999998776 444 4777763 3343444433 333 222233334443 68999
Q ss_pred HHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHH
Q 003042 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVD 494 (854)
Q Consensus 418 aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~ 494 (854)
.+|+.||++|+||..||||++++|||+| |.|+|+|..+|..+.+. .|++++|.|++
T Consensus 280 ~~~~~adv~v~ps~~e~~~~~~~EAma~---------------------G~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~ 338 (394)
T 2jjm_A 280 ELLAMSDLMLLLSEKESFGLVLLEAMAC---------------------GVPCIGTRVGGIPEVIQHGDTGYLCEVGDTT 338 (394)
T ss_dssp HHHHTCSEEEECCSCCSCCHHHHHHHHT---------------------TCCEEEECCTTSTTTCCBTTTEEEECTTCHH
T ss_pred HHHHhCCEEEeccccCCCchHHHHHHhc---------------------CCCEEEecCCChHHHhhcCCceEEeCCCCHH
Confidence 9999999999999999999999999999 45999999999888883 48999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhccc-cccChHHHHHHHHHHHHHHHH
Q 003042 495 AVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLERACR 543 (854)
Q Consensus 495 ~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~~~ 543 (854)
++|++|.++++.+ +.++...++.++++ ..+++..+++++++.++++.+
T Consensus 339 ~la~~i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 387 (394)
T 2jjm_A 339 GVADQAIQLLKDE-ELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLR 387 (394)
T ss_dssp HHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 9999999999855 44555566667777 789999999999988877644
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.3e-22 Score=226.36 Aligned_cols=297 Identities=15% Similarity=0.144 Sum_probs=202.2
Q ss_pred hcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCCh--hhhhcCCChHHHHHHh
Q 003042 167 GEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS--EIYRTLPVRDEILKSL 244 (854)
Q Consensus 167 ~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~--e~~~~lp~r~eil~~l 244 (854)
..|..|....+.+++.+ +..+| |+|++|+++...+..+++++ .++.+.+|..++.. ..++ .+-+-+
T Consensus 106 ~~~~~~~~~~~~~~~~l-~~~~~--Dvv~~~~~~~~~~~~~~~~~---~p~v~~~h~~~~~~~~~~~~------~~~~~~ 173 (416)
T 2x6q_A 106 EMKELYLNVNRENSKFI-DLSSF--DYVLVHDPQPAALIEFYEKK---SPWLWRCHIDLSSPNREFWE------FLRRFV 173 (416)
T ss_dssp HHHHHHHHHHHHHHHSS-CGGGS--SEEEEESSTTGGGGGGSCCC---SCEEEECCSCCSSCCHHHHH------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-hhcCC--CEEEEeccchhhHHHHHHhc---CCEEEEEccccCCccHHHHH------HHHHHH
Confidence 34555555544444433 34456 99999999877776665533 78999999887642 1111 111222
Q ss_pred hcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc-
Q 003042 245 LNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF- 323 (854)
Q Consensus 245 l~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~- 323 (854)
..+|.+-+.+.++.+.+ +.. .++.++|+|||+..+...... ......+++++
T Consensus 174 ~~~~~~i~~~s~~~~~~----------------------~~~--~~~~vi~ngvd~~~~~~~~~~---~~~~~~~r~~~~ 226 (416)
T 2x6q_A 174 EKYDRYIFHLPEYVQPE----------------------LDR--NKAVIMPPSIDPLSEKNVELK---QTEILRILERFD 226 (416)
T ss_dssp TTSSEEEESSGGGSCTT----------------------SCT--TTEEECCCCBCTTSTTTSCCC---HHHHHHHHHHTT
T ss_pred HhCCEEEEechHHHHhh----------------------CCc--cceEEeCCCCChhhhcccccC---hhhHHHHHHHhC
Confidence 34455444333222110 000 245689999998766432111 12344566666
Q ss_pred --CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCC
Q 003042 324 --DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGY 401 (854)
Q Consensus 324 --~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~ 401 (854)
.++++|+++||+++.||+..+++|+..+.+++|+++ |+++|..... .+ +..+.+++++.+.+..
T Consensus 227 ~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~----l~i~G~g~~~-~~---~~~~~l~~~~~~~~~~------ 292 (416)
T 2x6q_A 227 VDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQ----LLLVGVMAHD-DP---EGWIYFEKTLRKIGED------ 292 (416)
T ss_dssp CCTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCE----EEEEECCCTT-CH---HHHHHHHHHHHHHTTC------
T ss_pred CCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeE----EEEEecCccc-ch---hHHHHHHHHHHHhCCC------
Confidence 367899999999999999999999999999999866 8888854311 12 2334444555554321
Q ss_pred ccEEEEc--CCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcccc
Q 003042 402 EPIVIIK--EPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS 479 (854)
Q Consensus 402 ~pv~~~~--~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 479 (854)
..|.+++ ..++.+++..+|+.||++|+||..||||++++|||+| |.|+|+|+.+|..
T Consensus 293 ~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~---------------------G~PvI~~~~~g~~ 351 (416)
T 2x6q_A 293 YDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWK---------------------GKPVIGRAVGGIK 351 (416)
T ss_dssp TTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHT---------------------TCCEEEESCHHHH
T ss_pred CcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHc---------------------CCCEEEccCCCCh
Confidence 1255443 2456889999999999999999999999999999999 4599999998888
Q ss_pred ccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhcccc-ccChHHHHHHHHHHHHH
Q 003042 480 PSLS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS-SHDVAYWAKSIDQDLER 540 (854)
Q Consensus 480 ~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~ 540 (854)
+.+. .|++++ |++++|++|.++++.++ .++...++.++++. .+++..+++++++-+++
T Consensus 352 e~i~~~~~g~l~~--d~~~la~~i~~ll~~~~-~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 352 FQIVDGETGFLVR--DANEAVEVVLYLLKHPE-VSKEMGAKAKERVRKNFIITKHMERYLDILNS 413 (416)
T ss_dssp HHCCBTTTEEEES--SHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHT
T ss_pred hheecCCCeEEEC--CHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 8883 478886 99999999999998654 44555556666664 68999999988877654
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-21 Score=209.59 Aligned_cols=223 Identities=17% Similarity=0.193 Sum_probs=149.2
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEE-CCC
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRW-SKN 661 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~-~~~ 661 (854)
++|+|+||+||||++ +++.+++.++++|+++ ++.|+.++++|||+...+..++..+. ..+++++||+.+.. .+.
T Consensus 3 mikli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 78 (288)
T 1nrw_A 3 AMKLIAIDLDGTLLN---SKHQVSLENENALRQA-QRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGR 78 (288)
T ss_dssp -CCEEEEECCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCC
T ss_pred ceEEEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCeEEEcCCCc
Confidence 479999999999999 7889999999999999 88999999999999999988886552 23588999999987 333
Q ss_pred cceEEccccccchHHHHHHHHHHHHhcc--------CCcceEeccc---------------------------------c
Q 003042 662 SAWEICSLTRDFDWKEIAEPVMKLYTET--------TDGSFIEDKE---------------------------------T 700 (854)
Q Consensus 662 ~~~~~~~~~~~~~~~~~v~~~~~~y~~~--------~~g~~ie~k~---------------------------------~ 700 (854)
..+...++. +.+.++++...+. ..+.+..... .
T Consensus 79 ~~~~~~~~~------~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (288)
T 1nrw_A 79 LYHHETIDK------KRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQS 152 (288)
T ss_dssp EEEECCCCH------HHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTC
T ss_pred EEEEeeCCH------HHHHHHHHHHHHCCcEEEEEeCCEEEEcCchHHHHHHHHHHHhhcccccchHHHHhhhhhhhhcC
Confidence 333333221 2222222222111 1112211000 0
Q ss_pred eEEEe--eccCC---C--ccc----hhhHHHHHHHHHHHhcC--CCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCC
Q 003042 701 AIVWH--HQHAD---P--HFG----SCQAKELLDHLENVLAN--EPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRG 767 (854)
Q Consensus 701 ~l~~~--~~~~d---~--~~~----~~~~~el~~~l~~~l~~--~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~g 767 (854)
.+... +.... . ... .....+..+.+.+.+.. ....+.++..++||+|++++||.+++.+++++ |
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~lei~~~~~~K~~~~~~~~~~~---~ 229 (288)
T 1nrw_A 153 GFAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQL---N 229 (288)
T ss_dssp CEEECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHHTTCTTEEEECSSTTEEEEEETTCSHHHHHHHHHHHT---T
T ss_pred CceEcCCHHHhhccccCCCceEEEEEcCCHHHHHHHHHHHhhCCCEEEEeeCCCcEEEecCCCChHHHHHHHHHHh---C
Confidence 00000 01110 0 000 00011233334443332 12344567889999999999999999999999 9
Q ss_pred CCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeCC--HhHHHHHHHHH
Q 003042 768 KSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDD--TAEVINLLEGL 833 (854)
Q Consensus 768 i~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~--~~eV~~~L~~l 833 (854)
++++++++|||+.||++|++.+|. +|+||+. +..|+|++++ .++|++.|+++
T Consensus 230 ~~~~~~~~~GD~~nD~~m~~~ag~--------------~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~~~ 287 (288)
T 1nrw_A 230 IPLEETAAVGDSLNDKSMLEAAGK--------------GVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHL 287 (288)
T ss_dssp CCGGGEEEEESSGGGHHHHHHSSE--------------EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHT
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCc--------------EEEEcCCCHHHHhhCceeecCCCcChHHHHHHHh
Confidence 999999999999999999999985 6777765 3568999875 56799999875
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4e-21 Score=215.89 Aligned_cols=279 Identities=13% Similarity=0.101 Sum_probs=208.3
Q ss_pred HHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHH
Q 003042 184 MEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLS 263 (854)
Q Consensus 184 ~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~ 263 (854)
++..+| |+|++|.+....+..++.+. .+.++.+++|..+|....++.+-..-+ ..+-.+|.|-+.+....+.+.+
T Consensus 103 l~~~~~--Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~~~~ 177 (406)
T 2gek_A 103 IAEGDF--DVLHIHEPNAPSLSMLALQA-AEGPIVATFHTSTTKSLTLSVFQGILR--PYHEKIIGRIAVSDLARRWQME 177 (406)
T ss_dssp HHHHCC--SEEEEECCCSSSHHHHHHHH-EESSEEEEECCCCCSHHHHHHHHSTTH--HHHTTCSEEEESSHHHHHHHHH
T ss_pred HHhcCC--CEEEECCccchHHHHHHHHh-cCCCEEEEEcCcchhhhhHHHHHHHHH--HHHhhCCEEEECCHHHHHHHHH
Confidence 344567 89999999987775555443 368999999999887644332111111 4455799999988766665544
Q ss_pred HHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCc-cccCCHH
Q 003042 264 SCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDM-DLFKGIS 342 (854)
Q Consensus 264 ~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRl-d~~KGi~ 342 (854)
. ++ . .++ ++|+|+|...|....... . .-.++++|+++||+ .+.||+.
T Consensus 178 ~----~~---------------~--~~~-vi~~~v~~~~~~~~~~~~-------~---~~~~~~~i~~~G~~~~~~Kg~~ 225 (406)
T 2gek_A 178 A----LG---------------S--DAV-EIPNGVDVASFADAPLLD-------G---YPREGRTVLFLGRYDEPRKGMA 225 (406)
T ss_dssp H----HS---------------S--CEE-ECCCCBCHHHHHTCCCCT-------T---CSCSSCEEEEESCTTSGGGCHH
T ss_pred h----cC---------------C--CcE-EecCCCChhhcCCCchhh-------h---ccCCCeEEEEEeeeCccccCHH
Confidence 1 11 1 146 899999998886432110 0 01256799999999 9999999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHh
Q 003042 343 LKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAI 422 (854)
Q Consensus 343 ~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ 422 (854)
.+++|+.++.+++|+++ |+++|. ++. +++++.+.+ . .+.+.+.|.++.+++..+|+.
T Consensus 226 ~li~a~~~l~~~~~~~~----l~i~G~-----~~~-~~l~~~~~~----~---------~~~v~~~g~~~~~~~~~~~~~ 282 (406)
T 2gek_A 226 VLLAALPKLVARFPDVE----ILIVGR-----GDE-DELREQAGD----L---------AGHLRFLGQVDDATKASAMRS 282 (406)
T ss_dssp HHHHHHHHHHTTSTTCE----EEEESC-----SCH-HHHHHHTGG----G---------GGGEEECCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCeE----EEEEcC-----CcH-HHHHHHHHh----c---------cCcEEEEecCCHHHHHHHHHH
Confidence 99999999998888765 777774 233 344443322 1 234556778999999999999
Q ss_pred CcEEEEccC-ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHHH
Q 003042 423 AECCVVNCV-RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVAD 498 (854)
Q Consensus 423 ADv~vv~S~-~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ 498 (854)
||++|+||. .||||++++|||+| |.|+|+|..+|..+.+. .|++++|.|++++++
T Consensus 283 adv~v~ps~~~e~~~~~~~Ea~a~---------------------G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~ 341 (406)
T 2gek_A 283 ADVYCAPHLGGESFGIVLVEAMAA---------------------GTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAA 341 (406)
T ss_dssp SSEEEECCCSCCSSCHHHHHHHHH---------------------TCEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHH
T ss_pred CCEEEecCCCCCCCchHHHHHHHc---------------------CCCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHH
Confidence 999999997 99999999999999 45999999988887774 489999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHHHHHh
Q 003042 499 AMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERACRD 544 (854)
Q Consensus 499 ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 544 (854)
+|.++++.++ .+....++.++++..+++...++++++.++++.+.
T Consensus 342 ~i~~l~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 386 (406)
T 2gek_A 342 ALIGILEDDQ-LRAGYVARASERVHRYDWSVVSAQIMRVYETVSGA 386 (406)
T ss_dssp HHHHHHHCHH-HHHHHHHHHHHHGGGGBHHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHcCHH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 9999998654 45555666677777999999999999988876544
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.1e-22 Score=209.80 Aligned_cols=214 Identities=18% Similarity=0.245 Sum_probs=140.8
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCC--c-ccceeecCcEEEEECC
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV--E-KLGLSAEHGYFTRWSK 660 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~--~-~l~liaenG~~I~~~~ 660 (854)
+.++|++||||||++ ++..+ +.+.++|+++ + .|+.|++||||++..+.+++..+ . ..+++++||+.|+...
T Consensus 2 ~~~li~~DlDGTLl~---~~~~~-~~~~~~l~~~-~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~NGa~i~~~~ 75 (244)
T 1s2o_A 2 RQLLLISDLDNTWVG---DQQAL-EHLQEYLGDR-R-GNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPE 75 (244)
T ss_dssp CSEEEEECTBTTTBS---CHHHH-HHHHHHHHTT-G-GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETT
T ss_pred CCeEEEEeCCCCCcC---CHHHH-HHHHHHHHHh-c-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEECCCcEEEeCC
Confidence 445999999999999 54444 6788889886 5 58999999999999999887653 2 2358899999988742
Q ss_pred C--cceEEccccccchH-HHHHHHHHHHHhccCCcceE----ecccceEEEeeccCCCccchhhHHHHHHHHHHHhcC--
Q 003042 661 N--SAWEICSLTRDFDW-KEIAEPVMKLYTETTDGSFI----EDKETAIVWHHQHADPHFGSCQAKELLDHLENVLAN-- 731 (854)
Q Consensus 661 ~--~~~~~~~~~~~~~~-~~~v~~~~~~y~~~~~g~~i----e~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~-- 731 (854)
. ..|...+. ..| .+.+......+ ++... +.+...+.+.+.. +.. .+..+.+.+.+..
T Consensus 76 ~~~~~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ki~~~~~~---~~~----~~~~~~l~~~~~~~~ 141 (244)
T 1s2o_A 76 GLDQHWADYLS---EHWQRDILQAIADGF----EALKPQSPLEQNPWKISYHLDP---QAC----PTVIDQLTEMLKETG 141 (244)
T ss_dssp EECHHHHHHHH---TTCCHHHHHHHHHTC----TTEEECCGGGCBTTBEEEEECT---TSC----THHHHHHHHHHHTSS
T ss_pred CcChHHHHHHh---ccccHHHHHHHHHhc----cCccccCcccCCCeEEEEEeCh---hhH----HHHHHHHHHHHHhcC
Confidence 1 11111100 011 11112222222 11111 1122333333321 111 1223333333332
Q ss_pred CCE-EEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEec
Q 003042 732 EPV-VVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVG 810 (854)
Q Consensus 732 ~~~-~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG 810 (854)
..+ .+.++..++||+|++++|+.+++++++++ |++++++++|||+.||++||+.+|. +|+||
T Consensus 142 ~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~---~~~~~~~~~~GD~~nD~~m~~~~g~--------------~va~~ 204 (244)
T 1s2o_A 142 IPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHL---AMEPSQTLVCGDSGNDIGLFETSAR--------------GVIVR 204 (244)
T ss_dssp CCEEEEEETTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHTSSSE--------------EEECT
T ss_pred CCeEEEEecCceEEeccCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHhccCc--------------EEEEc
Confidence 123 34577899999999999999999999999 9999999999999999999998874 68888
Q ss_pred CCC----cc-------cceEeCC--HhHHHHHHHHHH
Q 003042 811 QKP----SM-------AKYYLDD--TAEVINLLEGLA 834 (854)
Q Consensus 811 ~~~----s~-------A~y~l~~--~~eV~~~L~~l~ 834 (854)
+.. .. |+|++++ .++|++.|+++.
T Consensus 205 na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~~~~ 241 (244)
T 1s2o_A 205 NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAHFD 241 (244)
T ss_dssp TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHHTT
T ss_pred CCcHHHHHHHhcccccceeecCCcchhHHHHHHHHhc
Confidence 753 32 7788865 567999998764
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-21 Score=237.19 Aligned_cols=309 Identities=14% Similarity=0.113 Sum_probs=206.9
Q ss_pred CeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChH---------H---HHHHhhcCCeEeecCHHHHH
Q 003042 192 DYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRD---------E---ILKSLLNSDLIGFHTFDYAR 259 (854)
Q Consensus 192 D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~---------e---il~~ll~~dligf~t~~~~~ 259 (854)
|+|+.|++...+++.+++++. ++|+.++.|...+.........++. . -...+-.||.|-..+...++
T Consensus 409 DVIHsH~~~sglva~llar~~-gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~ 487 (816)
T 3s28_A 409 DLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIA 487 (816)
T ss_dssp SEEEEEHHHHHHHHHHHHHHH-TCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHH
T ss_pred eEEEeCCchHHHHHHHHHHHc-CCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHH
Confidence 999999776666666665554 7899999997543211111011100 0 01145578998888876655
Q ss_pred HHHHHHHhhhCccccccC-----ce----eeEEECCeEEEEEEeccccCchHHHhhhCCch----HHHHHHHH-------
Q 003042 260 HFLSSCSRMLGLNYESKR-----GY----IGLDYFGRTVSIKILPVGIHMGQFESIMSLDV----TGQKVKEL------- 319 (854)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~-----~~----~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~----~~~~~~~l------- 319 (854)
.....+ + .+.... +. -++..... ++.++|+|||.+.|.+...... .......+
T Consensus 488 ~l~~~~----~-~y~~~~~~~~p~Lyr~~~gI~~~~~--ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~ 560 (816)
T 3s28_A 488 GSKETV----G-QYESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVEN 560 (816)
T ss_dssp CCSSSC----C-TTGGGSSEEETTTEEEEESCCTTCT--TEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCB
T ss_pred HHHHHH----H-HhhhhhccccchhhhcccccccCCC--CEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhH
Confidence 321100 0 011100 00 00111111 7889999999998865432111 01111111
Q ss_pred HHH-----cCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCC--CCChhHHHHHHHHHHHHHHHH
Q 003042 320 KEK-----FDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPA--RSSGKDVQDLLSDTNRIAEEI 392 (854)
Q Consensus 320 ~~~-----~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~--r~~~~~~~~l~~~v~~~v~~I 392 (854)
++. ..++++|+++||+++.||+..+++|+.++.+++|+++ |+++|... ....++..+..+++.+++.+.
T Consensus 561 r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~----LvIvG~g~~~~~~~~e~~~~~~~L~~li~~l 636 (816)
T 3s28_A 561 KEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELAN----LVVVGGDRRKESKDNEEKAEMKKMYDLIEEY 636 (816)
T ss_dssp TTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCE----EEEECCCTTSCCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeE----EEEEeCCCcccccchhhHHHHHHHHHHHHHc
Confidence 111 2467899999999999999999999999988877655 88888644 222334445666677777663
Q ss_pred hhccCCCCCccEEEEcC----CCChhhHHHHHH-hCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCC
Q 003042 393 NLNFGKPGYEPIVIIKE----PLSTQDKVPYYA-IAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKK 467 (854)
Q Consensus 393 n~~~~~~~~~pv~~~~~----~~~~~el~aly~-~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~ 467 (854)
+....+.+.| .++.+|+..+|+ +||+||+||..||||++++||||| |
T Consensus 637 -------gL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~---------------------G 688 (816)
T 3s28_A 637 -------KLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTC---------------------G 688 (816)
T ss_dssp -------TCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHT---------------------T
T ss_pred -------CCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHc---------------------C
Confidence 3334445555 445689999998 689999999999999999999999 4
Q ss_pred ceEEEecCccccccCC---CceEeCCCCHHHHHHHHHHHh----cCCHHHHHHHHHHHhccc-cccChHHHHHHHHHHHH
Q 003042 468 SVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSAL----QMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLE 539 (854)
Q Consensus 468 g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL----~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~ 539 (854)
.|+|+|..+|..+.+. .|++|+|.|++++|++|.+++ ..++ .++...++.++++ +.+++..+++++++-.+
T Consensus 689 ~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~~-~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~ 767 (816)
T 3s28_A 689 LPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPS-HWDEISKGGLQRIEEKYTWQIYSQRLLTLTG 767 (816)
T ss_dssp CCEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHCTH-HHHHHHHHHHHHHHHSCCHHHHHHHHHHHHH
T ss_pred CCEEEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhccCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 6999999999998882 489999999999999998877 5554 5555666667777 78999999999988776
Q ss_pred HH
Q 003042 540 RA 541 (854)
Q Consensus 540 ~~ 541 (854)
+.
T Consensus 768 ~~ 769 (816)
T 3s28_A 768 VY 769 (816)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=8.8e-20 Score=211.59 Aligned_cols=354 Identities=16% Similarity=0.129 Sum_probs=217.8
Q ss_pred cccccccccccCCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEec
Q 003042 143 KHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLH 222 (854)
Q Consensus 143 ~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH 222 (854)
+.-||-.|+--.+. ....++ .-..|--+-+.|-+.+...-....|++++||+|-.++|.+||++.++++..|+.|
T Consensus 139 ~~~lw~~~~i~s~~---~yg~~d--d~~~F~y~~~avl~~l~~~~~~~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH 213 (725)
T 3nb0_A 139 KGDLWSLVGIPSPE---NDFETN--DAILLGYTVAWFLGEVAHLDSQHAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTH 213 (725)
T ss_dssp HHHHHHHHCCCCCS---SCHHHH--HHHHHHHHHHHHHHHHHHHCCSEEEEEEEESGGGCTHHHHHHHTTCSCEEEEEES
T ss_pred HHHHHHHhCcCCCC---cccchh--HHHHHHHHHHHHHHHHHhcCCCCCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEe
Confidence 45588887654321 111111 2233333444444444221111128999999999999999999999999999999
Q ss_pred CC----C----CChhhhhcCC--------------ChHHHHH-HhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCce
Q 003042 223 SP----F----PSSEIYRTLP--------------VRDEILK-SLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGY 279 (854)
Q Consensus 223 ~p----f----P~~e~~~~lp--------------~r~eil~-~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~ 279 (854)
-- + =..++|..+. ..-.+.+ ++..||.|-.-+..|++.-. .+++...
T Consensus 214 ~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~~AD~ITTVS~~yA~Ei~----~Ll~r~~------ 283 (725)
T 3nb0_A 214 ATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAHSADVFTTVSQITAFEAE----HLLKRKP------ 283 (725)
T ss_dssp SCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHHHSSEEEESSHHHHHHHH----HHTSSCC------
T ss_pred cchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHHhCCEEEECCHHHHHHHH----HHhcCCC------
Confidence 64 1 0111122111 1222333 45678888888887776533 2433210
Q ss_pred eeEEECCeEEEEEEeccccCchHHHhhhCC----chHHHHHH-HHHHHc-------CCCEEEEE-ecCcc-ccCCHHHHH
Q 003042 280 IGLDYFGRTVSIKILPVGIHMGQFESIMSL----DVTGQKVK-ELKEKF-------DGKIVILG-VDDMD-LFKGISLKF 345 (854)
Q Consensus 280 ~~i~~~gr~~~i~v~p~GId~~~~~~~~~~----~~~~~~~~-~l~~~~-------~~~~iil~-VdRld-~~KGi~~~l 345 (854)
.. ++|+|||++.|.+.... ...+++++ .+++.+ .+++++++ +||++ ..||++.++
T Consensus 284 ---------d~--iIpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~i 352 (725)
T 3nb0_A 284 ---------DG--ILPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFI 352 (725)
T ss_dssp ---------SE--ECCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHH
T ss_pred ---------CE--EEcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHHHH
Confidence 12 29999999887542100 01111221 123322 14666666 79999 579999999
Q ss_pred HHHHHHHHhC--CCCCCcEEEEEEecCCCCChhHH-----HHHHHHHHHHH-----------------------------
Q 003042 346 LAMGQLLEQH--PDLRGKVVLVQITNPARSSGKDV-----QDLLSDTNRIA----------------------------- 389 (854)
Q Consensus 346 ~A~~~ll~~~--p~~~~~vvLvqi~~p~r~~~~~~-----~~l~~~v~~~v----------------------------- 389 (854)
.|+.+|...- ... ++-|+..|..|+...+... +.+.+++...+
T Consensus 353 eAl~~L~~~l~~~~~-~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 431 (725)
T 3nb0_A 353 EALARLNYRLKVSGS-KKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPT 431 (725)
T ss_dssp HHHHHHHHHHHHTTC-CCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCC
T ss_pred HHHHHHHHHHhhccC-CCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCC
Confidence 9999986531 111 2333333444544333211 11111111111
Q ss_pred ------------------------------------------------HHHhhccCCCCCccEEEEcCCCChh------h
Q 003042 390 ------------------------------------------------EEINLNFGKPGYEPIVIIKEPLSTQ------D 415 (854)
Q Consensus 390 ------------------------------------------------~~In~~~~~~~~~pv~~~~~~~~~~------e 415 (854)
.+++-.-...+-..|+++.+.++.. +
T Consensus 432 ~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d 511 (725)
T 3nb0_A 432 DLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLD 511 (725)
T ss_dssp CHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCC
T ss_pred CHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhH
Confidence 1111111112334578888888876 5
Q ss_pred HHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC----------Cc
Q 003042 416 KVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS----------GA 485 (854)
Q Consensus 416 l~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~----------~a 485 (854)
+..+|+.||+||+||.+||||++++||||| |.|+|+|..+|+.+.+. .|
T Consensus 512 ~~~~~~~advfV~PS~~EgfGl~~LEAmA~---------------------G~PvI~s~~gG~~d~V~dg~~~~~~~~tG 570 (725)
T 3nb0_A 512 YDEFVRGCHLGVFPSYYEPWGYTPAECTVM---------------------GVPSITTNVSGFGSYMEDLIETNQAKDYG 570 (725)
T ss_dssp HHHHHHHCSEEECCCSSBSSCHHHHHHHHT---------------------TCCEEEETTBHHHHHHHTTSCHHHHHHTT
T ss_pred HHHHHhhceEEEeccccCCCCHHHHHHHHc---------------------CCCEEEeCCCChhhhhhccccccCCCCce
Confidence 899999999999999999999999999999 56999999999987662 37
Q ss_pred eEe---CCCCHHHHHHHHHHHh----cCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHHHHHh
Q 003042 486 IRV---NPWNVDAVADAMDSAL----QMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERACRD 544 (854)
Q Consensus 486 i~v---nP~d~~~~A~ai~~aL----~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 544 (854)
++| +|.|+++++++|.++| .+++.++..+.++.++....++|.+-++.+++..+++...
T Consensus 571 ~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 571 IYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKARQLALRR 636 (725)
T ss_dssp EEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 888 4567777666666665 4677776666666677778899999999999888877654
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.84 E-value=4.8e-21 Score=202.25 Aligned_cols=203 Identities=19% Similarity=0.191 Sum_probs=129.8
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECC--
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSK-- 660 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~-- 660 (854)
++|+|+|||||||+ . ...+++ ++++|+++ +++|+.|+|+|||+...+..++..+. ..+++++||+.|...+
T Consensus 1 Mikli~~DlDGTLl-~---~~~~~~-~~~~l~~l-~~~g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~ 74 (249)
T 2zos_A 1 MIRLIFLDIDKTLI-P---GYEPDP-AKPIIEEL-KDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGY 74 (249)
T ss_dssp CEEEEEECCSTTTC-T---TSCSGG-GHHHHHHH-HHTTEEEEEBCSSCHHHHHHHHHHHTCCSCEEETTTTEEECCTTC
T ss_pred CccEEEEeCCCCcc-C---CCCcHH-HHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHcCCCccEEEeCCeEEEccCCc
Confidence 36999999999999 3 344554 99999999 78999999999999999988876543 3478999999998763
Q ss_pred ------------CcceEEccccccchHHHHHHHHHHH-----HhccCC-------cceEe------cccceEEEeeccCC
Q 003042 661 ------------NSAWEICSLTRDFDWKEIAEPVMKL-----YTETTD-------GSFIE------DKETAIVWHHQHAD 710 (854)
Q Consensus 661 ------------~~~~~~~~~~~~~~~~~~v~~~~~~-----y~~~~~-------g~~ie------~k~~~l~~~~~~~d 710 (854)
...+...++. ..+.+.++.+.+. |..... +.... .........+.. +
T Consensus 75 ~~~~~~~~~~~~~~i~~~~l~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 151 (249)
T 2zos_A 75 FPFDVKGKEVGNYIVIELGIRV--EKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEWS-R 151 (249)
T ss_dssp CC------CCCCCCEEECSCCH--HHHHHHHHHHHHHHTCEEGGGSCHHHHHHHHCCCTTTHHHHHCCSSCEEEEECS-S
T ss_pred ccccccccccCceEEEecCCCH--HHHHHHHHHHHhhcCEEEecCCCHHHHHHHhCCChhHhhhhhhhhhcCceEecC-C
Confidence 2233322221 1222222222111 111000 00000 000000000000 0
Q ss_pred CccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCC-CCCeEEEEeCCcccHHHHHHh
Q 003042 711 PHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGK-SPDFVLCIGDDRSDEDMFESI 789 (854)
Q Consensus 711 ~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi-~~d~vlaiGDs~ND~~Mf~~a 789 (854)
++ . .+.+.+ ..+.+..+..++||+| ++|||.|++.+++++ |+ +++++++|||+.||++||+.+
T Consensus 152 ~~-----~---~~~l~~----~~~~~~~s~~~~ei~~-g~sKg~al~~l~~~~---~~~~~~~viafGD~~NDi~Ml~~a 215 (249)
T 2zos_A 152 DG-----W---EEVLVE----GGFKVTMGSRFYTVHG-NSDKGKAAKILLDFY---KRLGQIESYAVGDSYNDFPMFEVV 215 (249)
T ss_dssp SC-----H---HHHHHH----TTCEEEECSSSEEEEC-SCCHHHHHHHHHHHH---HTTSCEEEEEEECSGGGHHHHTTS
T ss_pred HH-----H---HHHHHh----CCEEEEecCCeEEEeC-CCChHHHHHHHHHHh---ccCCCceEEEECCCcccHHHHHhC
Confidence 10 1 223332 1234455567899999 999999999999999 88 899999999999999999999
Q ss_pred hhhcCCCCCCCCccEEEEEecCCC-----cccceEeCCHhH
Q 003042 790 EQAVADPSVPGIAEVFACTVGQKP-----SMAKYYLDDTAE 825 (854)
Q Consensus 790 g~~~~~~~~~~~~~~~aV~vG~~~-----s~A~y~l~~~~e 825 (854)
|. +|+||++. ..|+|+++++++
T Consensus 216 g~--------------~va~gna~~~~~~~~a~~v~~~~~~ 242 (249)
T 2zos_A 216 DK--------------VFIVGSLKHKKAQNVSSIIDVLEVI 242 (249)
T ss_dssp SE--------------EEEESSCCCTTEEEESSHHHHHHHH
T ss_pred Cc--------------EEEeCCCCccccchhceEEeccccc
Confidence 85 67888753 356776665544
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.9e-21 Score=206.33 Aligned_cols=223 Identities=14% Similarity=0.125 Sum_probs=141.4
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCc----
Q 003042 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNS---- 662 (854)
Q Consensus 587 lI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~---- 662 (854)
+|+|||||||++ +. .+++.+.++|+++ +++|+.|+++|||+...+. .++ ...+++++||+.+..++..
T Consensus 2 li~~DlDGTLl~---~~-~i~~~~~~al~~l-~~~Gi~v~iaTGR~~~~~~-~l~--~~~~~i~~nGa~i~~~~~~~~~~ 73 (259)
T 3zx4_A 2 IVFTDLDGTLLD---ER-GELGPAREALERL-RALGVPVVPVTAKTRKEVE-ALG--LEPPFIVENGGGLYLPRDWPVRA 73 (259)
T ss_dssp EEEECCCCCCSC---SS-SSCSTTHHHHHHH-HHTTCCEEEBCSSCHHHHH-HTT--CCSSEEEGGGTEEEEETTCSSCC
T ss_pred EEEEeCCCCCcC---CC-cCCHHHHHHHHHH-HHCCCeEEEEeCCCHHHHH-HcC--CCCcEEEECCcEEEeCCCCcccc
Confidence 799999999999 77 8999999999999 8899999999999999888 332 1356899999999887653
Q ss_pred ------ceEEccccccchHHHHHHHHHHHHhccCCcceEecc------cceEEEee------ccCCCc--cchhhHHHHH
Q 003042 663 ------AWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDK------ETAIVWHH------QHADPH--FGSCQAKELL 722 (854)
Q Consensus 663 ------~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k------~~~l~~~~------~~~d~~--~~~~~~~el~ 722 (854)
.+..........+.+.++.+.+.|.... ..+.... ...+.... +..... +.......+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (259)
T 3zx4_A 74 GRPKGGYRVVSLAWPYRKVRARLREAEALAGRPI-LGYGDLTAEAVARLTGLSREAARRAKAREYDETLVLCPEEVEAVL 152 (259)
T ss_dssp SEEETTEEEEECSCCHHHHHHHHHHHHHHHTSCC-CBGGGBCHHHHHHHHCCCHHHHHHHTCCSSCEEBCCCTTTHHHHH
T ss_pred cccCCceEEEEcCCCHHHHHHHHHHHHHhcCceE-EEcCCCCHHHHHHHcCCCHHHhhhhhccccceeEEeCcHHHHHHH
Confidence 1111111111123333333322221100 0000000 00000000 000000 0000123333
Q ss_pred HHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCC--CeEEEEeCCcccHHHHHHhhhhcCCCCCCC
Q 003042 723 DHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSP--DFVLCIGDDRSDEDMFESIEQAVADPSVPG 800 (854)
Q Consensus 723 ~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~--d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~ 800 (854)
+.+.+ ..+.++.+..++|++|+ ++|+.+++++++++ |+++ +++++|||+.||++||+.+|.
T Consensus 153 ~~l~~----~~~~~~~s~~~~ei~~~-~~K~~~l~~l~~~~---~i~~~~~~~~~~GD~~nD~~m~~~ag~--------- 215 (259)
T 3zx4_A 153 EALEA----VGLEWTHGGRFYHAAKG-ADKGRAVARLRALW---PDPEEARFAVGLGDSLNDLPLFRAVDL--------- 215 (259)
T ss_dssp HHHHH----TTCEEEECSSSEEEESS-CCHHHHHHHHHHTC---SSHHHHTSEEEEESSGGGHHHHHTSSE---------
T ss_pred HHHHH----CCcEEEecCceEEEcCC-CCHHHHHHHHHHHh---CCCCCCceEEEEeCCHHHHHHHHhCCC---------
Confidence 33332 23445455566799999 99999999999999 9998 999999999999999999985
Q ss_pred CccEEEEEecCC-CcccceEeCC--HhHHHHHHHHHHhccCCC
Q 003042 801 IAEVFACTVGQK-PSMAKYYLDD--TAEVINLLEGLATESVHS 840 (854)
Q Consensus 801 ~~~~~aV~vG~~-~s~A~y~l~~--~~eV~~~L~~l~~~~~~~ 840 (854)
+|+||++ +..|+|++.+ .++|.+.|+.+.......
T Consensus 216 -----~va~~na~~~~~~~~~~~~~~~gv~~~~~~~~~~~~~~ 253 (259)
T 3zx4_A 216 -----AVYVGRGDPPEGVLATPAPGPEGFRYAVERYLLPRLSR 253 (259)
T ss_dssp -----EEECSSSCCCTTCEECSSCHHHHHHHHHHHHTTTC---
T ss_pred -----eEEeCChhhcCCcEEeCCCCchHHHHHHHHHHHhCcCc
Confidence 6777764 2456677654 678999999988755443
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=7.7e-20 Score=201.23 Aligned_cols=244 Identities=10% Similarity=-0.027 Sum_probs=181.2
Q ss_pred HHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHH
Q 003042 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFL 262 (854)
Q Consensus 183 i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl 262 (854)
+++..++ |+|++|.++..++. .+..+.+ .+++|..++.... +|.|-+.+....+.+.
T Consensus 79 ~l~~~~~--Dvi~~~~~~~~~~~----~~~~~~p-v~~~h~~~~~~~~----------------~d~ii~~S~~~~~~~~ 135 (342)
T 2iuy_A 79 WLRTADV--DVVHDHSGGVIGPA----GLPPGTA-FISSHHFTTRPVN----------------PVGCTYSSRAQRAHCG 135 (342)
T ss_dssp HHHHCCC--SEEEECSSSSSCST----TCCTTCE-EEEEECSSSBCSC----------------CTTEEESCHHHHHHTT
T ss_pred HHHhcCC--CEEEECCchhhHHH----HhhcCCC-EEEecCCCCCccc----------------ceEEEEcCHHHHHHHh
Confidence 4445566 89999998865443 3455788 9999998874321 8888888875554432
Q ss_pred HHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHH
Q 003042 263 SSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGIS 342 (854)
Q Consensus 263 ~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~ 342 (854)
+ ..++.++|+|||.+.|..... ...++++|+++||+.+.||+.
T Consensus 136 ~------------------------~~~~~vi~ngvd~~~~~~~~~-------------~~~~~~~i~~vG~~~~~Kg~~ 178 (342)
T 2iuy_A 136 G------------------------GDDAPVIPIPVDPARYRSAAD-------------QVAKEDFLLFMGRVSPHKGAL 178 (342)
T ss_dssp C------------------------CTTSCBCCCCBCGGGSCCSTT-------------CCCCCSCEEEESCCCGGGTHH
T ss_pred c------------------------CCceEEEcCCCChhhcCcccc-------------cCCCCCEEEEEeccccccCHH
Confidence 1 113567899999887753211 123566899999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHh
Q 003042 343 LKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAI 422 (854)
Q Consensus 343 ~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ 422 (854)
.+++|++++ +++ |+++|. ++..+.++ +++.+++ +.+.+.|.++.+|+..+|+.
T Consensus 179 ~li~a~~~~-----~~~----l~i~G~-----g~~~~~l~----~~~~~~~---------~~v~~~g~~~~~~l~~~~~~ 231 (342)
T 2iuy_A 179 EAAAFAHAC-----GRR----LVLAGP-----AWEPEYFD----EITRRYG---------STVEPIGEVGGERRLDLLAS 231 (342)
T ss_dssp HHHHHHHHH-----TCC----EEEESC-----CCCHHHHH----HHHHHHT---------TTEEECCCCCHHHHHHHHHH
T ss_pred HHHHHHHhc-----CcE----EEEEeC-----cccHHHHH----HHHHHhC---------CCEEEeccCCHHHHHHHHHh
Confidence 999999886 343 777774 23323333 3444432 13456778999999999999
Q ss_pred CcEEEEccC----------ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC-C----CceE
Q 003042 423 AECCVVNCV----------RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL-S----GAIR 487 (854)
Q Consensus 423 ADv~vv~S~----------~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~----~ai~ 487 (854)
||++|+||. .||||++++|||+| |.|+|+|..+|..+.+ + .|++
T Consensus 232 adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~---------------------G~PvI~s~~~~~~e~~~~~~~~~g~~ 290 (342)
T 2iuy_A 232 AHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVS---------------------GTPVVGTGNGCLAEIVPSVGEVVGYG 290 (342)
T ss_dssp CSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHT---------------------TCCEEECCTTTHHHHGGGGEEECCSS
T ss_pred CCEEEECCcccccccccccccCccHHHHHHHhc---------------------CCCEEEcCCCChHHHhcccCCCceEE
Confidence 999999999 89999999999999 4599999998888887 3 4899
Q ss_pred eCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccc-cccChHHHHHHHHHHHHHHHHh
Q 003042 488 VNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI-SSHDVAYWAKSIDQDLERACRD 544 (854)
Q Consensus 488 vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~~~~ 544 (854)
++| |++++|++|.+++. .+..++++ ..+++...++++++.++++.+.
T Consensus 291 ~~~-d~~~l~~~i~~l~~---------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 338 (342)
T 2iuy_A 291 TDF-APDEARRTLAGLPA---------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAG 338 (342)
T ss_dssp SCC-CHHHHHHHHHTSCC---------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTT
T ss_pred cCC-CHHHHHHHHHHHHH---------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHcc
Confidence 999 99999999999987 12233344 5689999999999888877653
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.80 E-value=3.4e-19 Score=180.44 Aligned_cols=188 Identities=19% Similarity=0.232 Sum_probs=143.1
Q ss_pred eccccCchHHH--hhhCCchHHHHHHHHHHHc--CCCEEEEEecCcc-ccCCHHHHHHHHHHHH--HhCCCCCCcEEEEE
Q 003042 294 LPVGIHMGQFE--SIMSLDVTGQKVKELKEKF--DGKIVILGVDDMD-LFKGISLKFLAMGQLL--EQHPDLRGKVVLVQ 366 (854)
Q Consensus 294 ~p~GId~~~~~--~~~~~~~~~~~~~~l~~~~--~~~~iil~VdRld-~~KGi~~~l~A~~~ll--~~~p~~~~~vvLvq 366 (854)
+|+|||.+.|. +. .....+....+++++ .++++|+++||+. +.||+..+++|+..+. +++|+++ |++
T Consensus 2 ipngvd~~~f~~~~~--~~~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~----l~i 75 (200)
T 2bfw_A 2 SHNGIDCSFWNESYL--TGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMR----FII 75 (200)
T ss_dssp ---CCCTTTSSGGGS--CSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEE----EEE
T ss_pred CCCccChhhcccccc--ccchhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeE----EEE
Confidence 68999999886 32 111222345567777 3677999999999 9999999999999997 7777654 887
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeee
Q 003042 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (854)
Q Consensus 367 i~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~ 446 (854)
+|. ++ .+..+++.+++.+.+ .|+++.+.++.+++..+|+.||++|+||..||||++++|||+|
T Consensus 76 ~G~-----~~--~~~~~~l~~~~~~~~---------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~- 138 (200)
T 2bfw_A 76 IGK-----GD--PELEGWARSLEEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL- 138 (200)
T ss_dssp ECC-----BC--HHHHHHHHHHHHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHT-
T ss_pred ECC-----CC--hHHHHHHHHHHHhcC---------CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHC-
Confidence 774 22 123344555554432 3555488899999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEecCccccccC--CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccc
Q 003042 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL--SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS 524 (854)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 524 (854)
|.|+|+|..+|..+.+ ..|++++|.|+++++++|.++++|.+++++...++.++++.+
T Consensus 139 --------------------G~PvI~~~~~~~~e~~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~ 198 (200)
T 2bfw_A 139 --------------------GAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS 198 (200)
T ss_dssp --------------------TCEEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred --------------------CCCEEEeCCCChHHHcCCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 4599999999888887 248999999999999999999997666666666666655543
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3.5e-20 Score=205.77 Aligned_cols=227 Identities=14% Similarity=0.157 Sum_probs=170.0
Q ss_pred cCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc--
Q 003042 246 NSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF-- 323 (854)
Q Consensus 246 ~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-- 323 (854)
.+|.|-+.+....+.|.+. +|.. ..++.++|+|+|.+.|......+ ....+++++
T Consensus 136 ~~d~ii~~s~~~~~~~~~~----~~~~---------------~~~~~vi~ngv~~~~~~~~~~~~----~~~~~~~~~~~ 192 (374)
T 2iw1_A 136 KSTKLMMLTDKQIADFQKH----YQTE---------------PERFQILPPGIYPDRKYSEQIPN----SREIYRQKNGI 192 (374)
T ss_dssp CCCEEEESCHHHHHHHHHH----HCCC---------------GGGEEECCCCCCGGGSGGGSCTT----HHHHHHHHTTC
T ss_pred CCcEEEEcCHHHHHHHHHH----hCCC---------------hhheEEecCCcCHHhcCcccchh----HHHHHHHHhCC
Confidence 5899999888777766542 2322 12467899999998886543211 223456666
Q ss_pred -CCCEEEEEecCccccCCHHHHHHHHHHHHHh-CCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCC
Q 003042 324 -DGKIVILGVDDMDLFKGISLKFLAMGQLLEQ-HPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGY 401 (854)
Q Consensus 324 -~~~~iil~VdRld~~KGi~~~l~A~~~ll~~-~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~ 401 (854)
.++++|+++||+.+.||+..+++|+..+.++ +|+ +.|+++|... . +++++ ++.+.+ .
T Consensus 193 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G~g~-----~-~~~~~----~~~~~~-------~ 251 (374)
T 2iw1_A 193 KEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHN----TLLFVVGQDK-----P-RKFEA----LAEKLG-------V 251 (374)
T ss_dssp CTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHT----EEEEEESSSC-----C-HHHHH----HHHHHT-------C
T ss_pred CCCCeEEEEeccchhhcCHHHHHHHHHHhHhccCCc----eEEEEEcCCC-----H-HHHHH----HHHHcC-------C
Confidence 4678999999999999999999999988766 455 4488887522 1 23333 333322 2
Q ss_pred ccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcccccc
Q 003042 402 EPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS 481 (854)
Q Consensus 402 ~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 481 (854)
.+.+.+.|. .+++..+|+.||++|+||..||||++++|||+| |.|+|+|..+|..+.
T Consensus 252 ~~~v~~~g~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~---------------------G~Pvi~~~~~~~~e~ 308 (374)
T 2iw1_A 252 RSNVHFFSG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITA---------------------GLPVLTTAVCGYAHY 308 (374)
T ss_dssp GGGEEEESC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHH---------------------TCCEEEETTSTTTHH
T ss_pred CCcEEECCC--cccHHHHHHhcCEEEeccccCCcccHHHHHHHC---------------------CCCEEEecCCCchhh
Confidence 223334444 578999999999999999999999999999999 459999999998888
Q ss_pred C---CCceEeC-CCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHH
Q 003042 482 L---SGAIRVN-PWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 482 l---~~ai~vn-P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 540 (854)
+ ..|++++ |.|+++++++|.++++.+ +.++...++.++++.++++..|++.+.+.++.
T Consensus 309 i~~~~~g~~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 309 IADANCGTVIAEPFSQEQLNEVLRKALTQS-PLRMAWAENARHYADTQDLYSLPEKAADIITG 370 (374)
T ss_dssp HHHHTCEEEECSSCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHC
T ss_pred hccCCceEEeCCCCCHHHHHHHHHHHHcCh-HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 7 3589997 999999999999999854 45566667778888889999999988777653
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-17 Score=179.70 Aligned_cols=226 Identities=15% Similarity=0.153 Sum_probs=148.5
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHH-------cccCCCCeEEEEcCCCccchhhhhcCCc----ccceeec
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILND-------LCNDPKNAVFIVSGRGKDSLGNWFSGVE----KLGLSAE 651 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~-------L~~~~g~~v~I~TGR~~~~l~~~~~~~~----~l~liae 651 (854)
+++|+|+|||||||++ +. +++.+..++.+ ++.++|+.++++|||+...+..++..+. .-.+++.
T Consensus 20 ~~~kliifDlDGTLld---s~--i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~~g~~~~~~~~i~~ 94 (289)
T 3gyg_A 20 HPQYIVFCDFDETYFP---HT--IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKFRYFPHFIASD 94 (289)
T ss_dssp SCSEEEEEETBTTTBC---SS--CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHTTCCBCCSEEEET
T ss_pred CCCeEEEEECCCCCcC---CC--CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHhhccCCCCCeEeec
Confidence 4689999999999999 54 78888887772 3378999999999999999888775431 1225667
Q ss_pred CcEEEEE---CCCcceE----EccccccchHHHHHHHHHHHHhccC-----CcceEecccceEEEeeccCCCccchhhHH
Q 003042 652 HGYFTRW---SKNSAWE----ICSLTRDFDWKEIAEPVMKLYTETT-----DGSFIEDKETAIVWHHQHADPHFGSCQAK 719 (854)
Q Consensus 652 nG~~I~~---~~~~~~~----~~~~~~~~~~~~~v~~~~~~y~~~~-----~g~~ie~k~~~l~~~~~~~d~~~~~~~~~ 719 (854)
+|..+.. +|...+. ..+... ...+.+.++++.+.+.. ..+..+.....+.++|+..++.. ..
T Consensus 95 ~g~~i~~~~~ng~~~~~~~~~~~~~~~--~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~----~~ 168 (289)
T 3gyg_A 95 LGTEITYFSEHNFGQQDNKWNSRINEG--FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEIN----DK 168 (289)
T ss_dssp TTTEEEECCSSSTTEECHHHHHHHHTT--CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHH----HH
T ss_pred CCceEEEEcCCCcEeecCchhhhhccc--CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEecccccc----ch
Confidence 7776665 3332211 111100 11233445554443321 11112233344556666543321 11
Q ss_pred HHHHHHHHHhcCCC--EEEEE---------cCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHH
Q 003042 720 ELLDHLENVLANEP--VVVKR---------GQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFES 788 (854)
Q Consensus 720 el~~~l~~~l~~~~--~~v~~---------g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ 788 (854)
+....+...+...+ ..+.. +...+|+.|.+.+|+.+++.+++++ |++++++++|||+.||++|++.
T Consensus 169 ~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~---~~~~~~~~~~GDs~~D~~~~~~ 245 (289)
T 3gyg_A 169 KNLLAIEKICEEYGVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKY---NLNTERAIAFGDSGNDVRMLQT 245 (289)
T ss_dssp HHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEEEEEEEESCCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHTT
T ss_pred HHHHHHHHHHHHcCCCEEEEEccccccCCCCceEEEEEeCCCCHHHHHHHHHHHc---CCChhhEEEEcCCHHHHHHHHh
Confidence 12222333333222 22222 2278999999999999999999999 9999999999999999999999
Q ss_pred hhhhcCCCCCCCCccEEEEEecCC----CcccceEeCCH--hHHHHHHHHHHhc
Q 003042 789 IEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDDT--AEVINLLEGLATE 836 (854)
Q Consensus 789 ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~~--~eV~~~L~~l~~~ 836 (854)
+|. +|+||+. +..|+|++.++ ++|++.|+++.+.
T Consensus 246 ag~--------------~~~~~~~~~~~~~~a~~v~~~~~~~gv~~~~~~~~~~ 285 (289)
T 3gyg_A 246 VGN--------------GYLLKNATQEAKNLHNLITDSEYSKGITNTLKKLIGF 285 (289)
T ss_dssp SSE--------------EEECTTCCHHHHHHCCCBCSSCHHHHHHHHHHHHTCC
T ss_pred CCc--------------EEEECCccHHHHHhCCEEcCCCCcCHHHHHHHHHHHH
Confidence 984 6888875 35789988765 4599999988764
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.74 E-value=5.5e-18 Score=166.30 Aligned_cols=161 Identities=12% Similarity=0.030 Sum_probs=118.5
Q ss_pred CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEE
Q 003042 326 KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIV 405 (854)
Q Consensus 326 ~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~ 405 (854)
+.+|+++||+.+.||+..+++|+.++ +++|+ +.|+++|. ++..+++++. +.+.+ . .+
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~~----~~l~i~G~-----g~~~~~~~~~----~~~~~-------~--~v 58 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALS-KYKQD----IVLLLKGK-----GPDEKKIKLL----AQKLG-------V--KA 58 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTC-TTGGG----EEEEEECC-----STTHHHHHHH----HHHHT-------C--EE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHh-ccCCC----eEEEEEeC-----CccHHHHHHH----HHHcC-------C--eE
Confidence 56899999999999999999999886 44454 55888773 3333344443 33322 1 34
Q ss_pred EEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCc-eEEEec-CccccccC-
Q 003042 406 IIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKS-VIIVSE-FIGCSPSL- 482 (854)
Q Consensus 406 ~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g-~lV~Se-~~G~~~~l- 482 (854)
.+ +.++.+++..+|+.||++|+||..||||++++|||+| |. |+|++. .+|..+.+
T Consensus 59 ~~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~---------------------G~vPvi~~~~~~~~~~~~~ 116 (166)
T 3qhp_A 59 EF-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISV---------------------GIVPVIANSPLSATRQFAL 116 (166)
T ss_dssp EC-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHT---------------------TCCEEEECCTTCGGGGGCS
T ss_pred EE-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhc---------------------CCCcEEeeCCCCchhhhcc
Confidence 45 8899999999999999999999999999999999999 44 777745 44445555
Q ss_pred CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHH
Q 003042 483 SGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAK 532 (854)
Q Consensus 483 ~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 532 (854)
+++.+++|.|+++++++|.++++.+ +.++...++.++++.++++..+++
T Consensus 117 ~~~~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~ 165 (166)
T 3qhp_A 117 DERSLFEPNNAKDLSAKIDWWLENK-LERERMQNEYAKSALNYTLENSVI 165 (166)
T ss_dssp SGGGEECTTCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHC------
T ss_pred CCceEEcCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHCChhhhhc
Confidence 4577999999999999999999854 455555566677777788776654
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=7.9e-17 Score=182.62 Aligned_cols=178 Identities=8% Similarity=0.008 Sum_probs=127.2
Q ss_pred EEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCc-cccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 003042 290 SIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDM-DLFKGISLKFLAMGQLLEQHPDLRGKVVLVQIT 368 (854)
Q Consensus 290 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRl-d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~ 368 (854)
.+.++|+|+|.+.|... .....+++.|+++||+ .+.||+..+|+||+++.+++|+. .++.|+++|
T Consensus 218 ~~~~i~~g~d~~~~~~~-------------~~~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~-~~~~l~ivG 283 (413)
T 2x0d_A 218 DEYFFQPKINTTLKNYI-------------NDKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRS-NEWKIISVG 283 (413)
T ss_dssp EEEEECCCCCHHHHTTT-------------TSCCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTG-GGCEEEEEE
T ss_pred ceEEeCCCcCchhhccc-------------ccccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCC-CceEEEEEc
Confidence 45678999998766321 0112356688999997 68999999999999999998861 124488888
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecC
Q 003042 369 NPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQG 448 (854)
Q Consensus 369 ~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~ 448 (854)
.... . .+. +....+.|.|.++.+|+.++|+.||+||+||..||||++++|||||
T Consensus 284 ~~~~-~-------------------~~l---~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~--- 337 (413)
T 2x0d_A 284 EKHK-D-------------------IAL---GKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHF--- 337 (413)
T ss_dssp SCCC-C-------------------EEE---ETTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHT---
T ss_pred CCch-h-------------------hhc---CCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhC---
Confidence 4321 0 011 1123455677899999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCCceEEEecCccccccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhcccccc
Q 003042 449 SPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSH 525 (854)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 525 (854)
|.|+|++ .+|+.+.+. +|++|+|.|++++|++|.++++.++..++ +.++.+..+
T Consensus 338 ------------------G~PVV~~-~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~~~~~----~~~~~~~~~ 394 (413)
T 2x0d_A 338 ------------------GLRVITN-KYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFNNRDV----DKKESSNMM 394 (413)
T ss_dssp ------------------TCEEEEE-CBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC-----------CCBSCG
T ss_pred ------------------CCcEEEe-CCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHHHHHH----hHHHHHHhC
Confidence 4577774 567766662 48999999999999999999986643322 334445555
Q ss_pred ChHHH
Q 003042 526 DVAYW 530 (854)
Q Consensus 526 ~~~~W 530 (854)
+|..-
T Consensus 395 ~W~~~ 399 (413)
T 2x0d_A 395 FYINE 399 (413)
T ss_dssp GGCCC
T ss_pred CHHHH
Confidence 54433
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=5.9e-16 Score=172.67 Aligned_cols=280 Identities=14% Similarity=0.155 Sum_probs=175.6
Q ss_pred HHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHh-h-cCCeEeecCHHHHH
Q 003042 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL-L-NSDLIGFHTFDYAR 259 (854)
Q Consensus 182 ~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~l-l-~~dligf~t~~~~~ 259 (854)
++++..+| |+|++|+.....++..+..+..++|+.+..|... +...+. ++...+.+.+ . .+|.+-..+....+
T Consensus 80 ~~l~~~~p--Dvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~ 154 (384)
T 1vgv_A 80 PILAEFKP--DVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR-TGDLYS--PWPEEANRTLTGHLAMYHFSPTETSRQ 154 (384)
T ss_dssp HHHHHHCC--SEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC-CSCTTS--STTHHHHHHHHHTTCSEEEESSHHHHH
T ss_pred HHHHHhCC--CEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc-cccccC--CCchHhhHHHHHhhccEEEcCcHHHHH
Confidence 34556688 8999997544444544544555788887777432 222222 2223334433 2 38999888876666
Q ss_pred HHHHHHHhhhCccccccCceeeEEECCeEEEEEEecccc-CchHHHhhhCCchHHHHHHHHHHHcC----CC-EEEEEec
Q 003042 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGI-HMGQFESIMSLDVTGQKVKELKEKFD----GK-IVILGVD 333 (854)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GI-d~~~~~~~~~~~~~~~~~~~l~~~~~----~~-~iil~Vd 333 (854)
.|.+ .|+.. .++.++|+|+ |...+......+ ......+++++++ ++ .+++++|
T Consensus 155 ~l~~-----~g~~~---------------~~i~vi~n~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vl~~~g 213 (384)
T 1vgv_A 155 NLLR-----ENVAD---------------SRIFITGNTVIDALLWVRDQVMS-SDKLRSELAANYPFIDPDKKMILVTGH 213 (384)
T ss_dssp HHHH-----TTCCG---------------GGEEECCCHHHHHHHHHHHHTTT-CHHHHHHHHTTCTTCCTTSEEEEEECC
T ss_pred HHHH-----cCCCh---------------hhEEEeCChHHHHHHhhhhcccc-chhhhHHHHHhccccCCCCCEEEEEeC
Confidence 5542 23221 1356778884 433332110000 0001134555532 33 5788999
Q ss_pred Ccccc-CCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCC
Q 003042 334 DMDLF-KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLS 412 (854)
Q Consensus 334 Rld~~-KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~ 412 (854)
|+.+. ||+..+++|+.++.+++|+++ |+.++.+ ++ +++++++++++. ...|. +.+.++
T Consensus 214 r~~~~~kg~~~li~a~~~l~~~~~~~~----l~i~~g~----~~---~~~~~l~~~~~~---------~~~v~-~~g~~~ 272 (384)
T 1vgv_A 214 RRESFGRGFEEICHALADIATTHQDIQ----IVYPVHL----NP---NVREPVNRILGH---------VKNVI-LIDPQE 272 (384)
T ss_dssp CBSSCCHHHHHHHHHHHHHHHHCTTEE----EEEECCB----CH---HHHHHHHHHHTT---------CTTEE-EECCCC
T ss_pred CccccchHHHHHHHHHHHHHhhCCCeE----EEEEcCC----CH---HHHHHHHHHhhc---------CCCEE-EeCCCC
Confidence 99987 999999999999999888754 5554322 22 234444443211 11244 555788
Q ss_pred hhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecC-ccccccC--CCceEeC
Q 003042 413 TQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF-IGCSPSL--SGAIRVN 489 (854)
Q Consensus 413 ~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l--~~ai~vn 489 (854)
.+++..+|+.||+||.|| |.+.+|||+| |.|+|+|.. +|+.+.+ ..|++++
T Consensus 273 ~~~~~~~~~~ad~~v~~S-----g~~~lEA~a~---------------------G~PvI~~~~~~~~~e~v~~g~g~lv~ 326 (384)
T 1vgv_A 273 YLPFVWLMNHAWLILTDS-----GGIQEEAPSL---------------------GKPVLVMRDTTERPEAVTAGTVRLVG 326 (384)
T ss_dssp HHHHHHHHHHCSEEEESS-----STGGGTGGGG---------------------TCCEEEESSCCSCHHHHHHTSEEEEC
T ss_pred HHHHHHHHHhCcEEEECC-----cchHHHHHHc---------------------CCCEEEccCCCCcchhhhCCceEEeC
Confidence 899999999999999999 4458999999 459999987 5655555 3589998
Q ss_pred CCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHH
Q 003042 490 PWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQ 536 (854)
Q Consensus 490 P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 536 (854)
| |++++|++|.++|+.++ .++.+.++.+++...+++.+.++.+.+
T Consensus 327 ~-d~~~la~~i~~ll~d~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~ 371 (384)
T 1vgv_A 327 T-DKQRIVEEVTRLLKDEN-EYQAMSRAHNPYGDGQACSRILEALKN 371 (384)
T ss_dssp S-SHHHHHHHHHHHHHCHH-HHHHHHSSCCTTCCSCHHHHHHHHHHH
T ss_pred C-CHHHHHHHHHHHHhChH-HHhhhhhccCCCcCCCHHHHHHHHHHH
Confidence 8 99999999999998654 444444555666666666666655544
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.9e-16 Score=179.23 Aligned_cols=168 Identities=13% Similarity=0.110 Sum_probs=129.6
Q ss_pred EEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 003042 290 SIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITN 369 (854)
Q Consensus 290 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~ 369 (854)
++.++|+|||.+.|...... ...++++|+++||+.+.||+ ++.+.+++|+++ |+++|.
T Consensus 198 ~i~vipngvd~~~f~~~~~~------------~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~~~~~----l~ivG~ 255 (406)
T 2hy7_A 198 NVFHVGHGVDHNLDQLGDPS------------PYAEGIHAVAVGSMLFDPEF------FVVASKAFPQVT----FHVIGS 255 (406)
T ss_dssp TEEECCCCBCTTHHHHHCSC------------SCCSSEEEEEECCTTBCHHH------HHHHHHHCTTEE----EEEESC
T ss_pred CEEEEcCCcChHhcCccccc------------ccCCCcEEEEEeccccccCH------HHHHHHhCCCeE----EEEEeC
Confidence 67899999999988643211 12345899999999999999 555667788754 887773
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeee------
Q 003042 370 PARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYT------ 443 (854)
Q Consensus 370 p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~------ 443 (854)
|+ + ...+..+.+.|.|.++.+|+.++|+.||+||+||..||||++++|||
T Consensus 256 -----g~------------~-------~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eY 311 (406)
T 2hy7_A 256 -----GM------------G-------RHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQY 311 (406)
T ss_dssp -----SS------------C-------CCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHH
T ss_pred -----ch------------H-------HhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHH
Confidence 22 0 11233344556788999999999999999999999999999999999
Q ss_pred -eeecCCCccccccCCCCCCCCCCCceEEEecCccccccCCCceE-eCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhcc
Q 003042 444 -VSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIR-VNPWNVDAVADAMDSALQMENQEKILRHEKHYKY 521 (854)
Q Consensus 444 -a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~-vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 521 (854)
|| |.|+|+|+. .. .-..|++ |+|.|++++|++|.+++++++ .++
T Consensus 312 la~---------------------G~PVIas~~--v~-~~~~G~l~v~~~d~~~la~ai~~ll~~~~----------~~~ 357 (406)
T 2hy7_A 312 DFF---------------------GLPAVCPNA--VV-GPYKSRFGYTPGNADSVIAAITQALEAPR----------VRY 357 (406)
T ss_dssp HHH---------------------TCCEEEEGG--GT-CSCSSEEEECTTCHHHHHHHHHHHHHCCC----------CCC
T ss_pred hhC---------------------CCcEEEehh--cc-cCcceEEEeCCCCHHHHHHHHHHHHhCcc----------hhh
Confidence 99 458999887 11 1134888 999999999999999998875 145
Q ss_pred ccccChHHHHHHHHHH
Q 003042 522 ISSHDVAYWAKSIDQD 537 (854)
Q Consensus 522 v~~~~~~~W~~~~l~~ 537 (854)
...+++...++++++.
T Consensus 358 ~~~~sw~~~a~~~~~~ 373 (406)
T 2hy7_A 358 RQCLNWSDTTDRVLDP 373 (406)
T ss_dssp SCCCBHHHHHHHHHCG
T ss_pred hhcCCHHHHHHHHHHh
Confidence 6778988888877654
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.68 E-value=3.6e-16 Score=173.69 Aligned_cols=274 Identities=16% Similarity=0.145 Sum_probs=175.5
Q ss_pred HHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhh--cCCeEeecCHHHHHH
Q 003042 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLL--NSDLIGFHTFDYARH 260 (854)
Q Consensus 183 i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll--~~dligf~t~~~~~~ 260 (854)
+++..+| |+|++|......++..+..+..++|+.++.|.. .+...+. ++...+.+.++ .+|.+-..+....+.
T Consensus 90 ~l~~~~p--Dvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 164 (375)
T 3beo_A 90 VMKEAKP--DIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL-RTWDKYS--PYPEEMNRQLTGVMADLHFSPTAKSATN 164 (375)
T ss_dssp HHHHHCC--SEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC-CCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHH
T ss_pred HHHHhCC--CEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc-ccccccC--CChhHhhhhHHhhhhheeeCCCHHHHHH
Confidence 4455678 899999754333443333334467887665532 2222222 33345555543 389998888766665
Q ss_pred HHHHHHhhhCccccccCceeeEEECCeEEEEEEeccc-cCchHHHhhhCCchHHHHHHHHHHHcC-CCEEEEEecCcccc
Q 003042 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVG-IHMGQFESIMSLDVTGQKVKELKEKFD-GKIVILGVDDMDLF 338 (854)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~G-Id~~~~~~~~~~~~~~~~~~~l~~~~~-~~~iil~VdRld~~ 338 (854)
+.+ .|+.. .++.++|+| +|...+....... ..+++++. ++.+++++||+.+.
T Consensus 165 ~~~-----~g~~~---------------~~i~vi~n~~~d~~~~~~~~~~~------~~~~~~~~~~~~vl~~~gr~~~~ 218 (375)
T 3beo_A 165 LQK-----ENKDE---------------SRIFITGNTAIDALKTTVKETYS------HPVLEKLGNNRLVLMTAHRRENL 218 (375)
T ss_dssp HHH-----TTCCG---------------GGEEECCCHHHHHHHHHCCSSCC------CHHHHTTTTSEEEEEECCCGGGT
T ss_pred HHH-----cCCCc---------------ccEEEECChhHhhhhhhhhhhhh------HHHHHhccCCCeEEEEecccccc
Confidence 543 23221 135678999 8877665321111 12334443 44567899999986
Q ss_pred -CCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHH
Q 003042 339 -KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (854)
Q Consensus 339 -KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~ 417 (854)
||+..+++|++++.+++|+++ ++.... ++ .+++++++++++. ...| .|.+.++..++.
T Consensus 219 ~K~~~~li~a~~~l~~~~~~~~----~i~~~g------~~-~~~~~~~~~~~~~---------~~~v-~~~g~~~~~~~~ 277 (375)
T 3beo_A 219 GEPMRNMFRAIKRLVDKHEDVQ----VVYPVH------MN-PVVRETANDILGD---------YGRI-HLIEPLDVIDFH 277 (375)
T ss_dssp THHHHHHHHHHHHHHHHCTTEE----EEEECC------SC-HHHHHHHHHHHTT---------CTTE-EEECCCCHHHHH
T ss_pred hhHHHHHHHHHHHHHhhCCCeE----EEEeCC------CC-HHHHHHHHHHhhc---------cCCE-EEeCCCCHHHHH
Confidence 999999999999999888754 443221 11 2344455444211 1124 455678889999
Q ss_pred HHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecC-ccccccC--CCceEeCCCCHH
Q 003042 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF-IGCSPSL--SGAIRVNPWNVD 494 (854)
Q Consensus 418 aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l--~~ai~vnP~d~~ 494 (854)
.+|+.||++|.|| |.+++|||+| |.|+|+|.. +|..+.+ ..|++|++ |++
T Consensus 278 ~~~~~ad~~v~~s-----g~~~lEA~a~---------------------G~Pvi~~~~~~~~~e~v~~g~g~~v~~-d~~ 330 (375)
T 3beo_A 278 NVAARSYLMLTDS-----GGVQEEAPSL---------------------GVPVLVLRDTTERPEGIEAGTLKLAGT-DEE 330 (375)
T ss_dssp HHHHTCSEEEECC-----HHHHHHHHHH---------------------TCCEEECSSCCSCHHHHHTTSEEECCS-CHH
T ss_pred HHHHhCcEEEECC-----CChHHHHHhc---------------------CCCEEEecCCCCCceeecCCceEEcCC-CHH
Confidence 9999999999999 5569999999 458888864 6665555 34788887 999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHH
Q 003042 495 AVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQ 536 (854)
Q Consensus 495 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 536 (854)
++|++|.++++.++ .++.+.++.+++...+++.+.++.+.+
T Consensus 331 ~la~~i~~ll~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~ 371 (375)
T 3beo_A 331 TIFSLADELLSDKE-AHDKMSKASNPYGDGRASERIVEAILK 371 (375)
T ss_dssp HHHHHHHHHHHCHH-HHHHHCCCCCTTCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhChH-hHhhhhhcCCCCCCCcHHHHHHHHHHH
Confidence 99999999998653 444444455666666777666665544
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.62 E-value=3.3e-16 Score=155.95 Aligned_cols=142 Identities=16% Similarity=0.109 Sum_probs=112.0
Q ss_pred CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCcc
Q 003042 324 DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (854)
Q Consensus 324 ~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~p 403 (854)
.++++|+++||+.+.||+..+++|++++ |+++ |+++|... +..++++ ++.++.. +..+
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~----l~i~G~~~-----~~~~l~~----~~~~~~~-----~l~~ 78 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS-----KGDHAER----YARKIMK-----IAPD 78 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC-----TTSTHHH----HHHHHHH-----HSCT
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC----CCcE----EEEEecCc-----cHHHHHH----HHHhhhc-----ccCC
Confidence 4678999999999999999999999876 6655 77777432 2123333 3331111 1122
Q ss_pred EEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC
Q 003042 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS 483 (854)
Q Consensus 404 v~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 483 (854)
.+.+.+.++.+++..+|+.||++|+||..||||++++|||+| |.|+|+|..+|..+.+.
T Consensus 79 ~v~~~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~---------------------G~PvI~~~~~~~~e~i~ 137 (177)
T 2f9f_A 79 NVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMAS---------------------GKPVIAVNEGGFKETVI 137 (177)
T ss_dssp TEEEEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHT---------------------TCCEEEESSHHHHHHCC
T ss_pred cEEEeCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHc---------------------CCcEEEeCCCCHHHHhc
Confidence 344567899999999999999999999999999999999999 45999999988888773
Q ss_pred ---CceEeCCCCHHHHHHHHHHHhcCCHH
Q 003042 484 ---GAIRVNPWNVDAVADAMDSALQMENQ 509 (854)
Q Consensus 484 ---~ai~vnP~d~~~~A~ai~~aL~m~~~ 509 (854)
.|+++ +.|+++++++|.+++++++.
T Consensus 138 ~~~~g~~~-~~d~~~l~~~i~~l~~~~~~ 165 (177)
T 2f9f_A 138 NEKTGYLV-NADVNEIIDAMKKVSKNPDK 165 (177)
T ss_dssp BTTTEEEE-CSCHHHHHHHHHHHHHCTTT
T ss_pred CCCccEEe-CCCHHHHHHHHHHHHhCHHH
Confidence 47889 99999999999999988864
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.56 E-value=4.3e-14 Score=157.29 Aligned_cols=245 Identities=15% Similarity=0.130 Sum_probs=153.1
Q ss_pred HHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhh--cCCeEeecCHHHHH
Q 003042 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLL--NSDLIGFHTFDYAR 259 (854)
Q Consensus 182 ~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll--~~dligf~t~~~~~ 259 (854)
++++..+| |+|++|++....++..+..+..++|+. ..|.++.+...+. ++.....+.++ .+|.+-..+....+
T Consensus 85 ~~l~~~~p--Dvv~~~~~~~~~~~~~~~a~~~~ip~v-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~ 159 (376)
T 1v4v_A 85 RALKEMGA--DYVLVHGDTLTTFAVAWAAFLEGIPVG-HVEAGLRSGNLKE--PFPEEANRRLTDVLTDLDFAPTPLAKA 159 (376)
T ss_dssp HHHHHTTC--SEEEEESSCHHHHHHHHHHHHTTCCEE-EETCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHHcCC--CEEEEeCChHHHHHHHHHHHHhCCCEE-EEeCCCccccccC--CCchHHHHHHHHHHhceeeCCCHHHHH
Confidence 34556678 899999876555665554445578875 4555543322222 22233333322 37888777776665
Q ss_pred HHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccc-cCchHHHhhhCCchHHHHHHHHHHHcC-CCEEEEEecCccc
Q 003042 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVG-IHMGQFESIMSLDVTGQKVKELKEKFD-GKIVILGVDDMDL 337 (854)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~G-Id~~~~~~~~~~~~~~~~~~~l~~~~~-~~~iil~VdRld~ 337 (854)
.|.+ .|+.. .++.++|++ +|...+... ...++++++ ++.+++++||+..
T Consensus 160 ~l~~-----~g~~~---------------~ki~vi~n~~~d~~~~~~~---------~~~~~~~~~~~~~vl~~~gr~~~ 210 (376)
T 1v4v_A 160 NLLK-----EGKRE---------------EGILVTGQTGVDAVLLAAK---------LGRLPEGLPEGPYVTVTMHRREN 210 (376)
T ss_dssp HHHT-----TTCCG---------------GGEEECCCHHHHHHHHHHH---------HCCCCTTCCSSCEEEECCCCGGG
T ss_pred HHHH-----cCCCc---------------ceEEEECCchHHHHhhhhh---------hhHHHHhcCCCCEEEEEeCcccc
Confidence 5542 13221 134556664 453332211 011223343 4557788999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHH
Q 003042 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (854)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~ 417 (854)
.||+..+++|++++.+++|+++ ++.++. +++ .++++++++++. ...|+ +.+.++..++.
T Consensus 211 ~k~~~~ll~a~~~l~~~~~~~~----lv~~~g----~~~---~~~~~l~~~~~~---------~~~v~-~~g~~g~~~~~ 269 (376)
T 1v4v_A 211 WPLLSDLAQALKRVAEAFPHLT----FVYPVH----LNP---VVREAVFPVLKG---------VRNFV-LLDPLEYGSMA 269 (376)
T ss_dssp GGGHHHHHHHHHHHHHHCTTSE----EEEECC----SCH---HHHHHHHHHHTT---------CTTEE-EECCCCHHHHH
T ss_pred hHHHHHHHHHHHHHHhhCCCeE----EEEECC----CCH---HHHHHHHHHhcc---------CCCEE-EECCCCHHHHH
Confidence 9999999999999999898764 554432 222 233444444311 11344 55567788999
Q ss_pred HHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecC-ccccccC--CCceEeCCCCHH
Q 003042 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF-IGCSPSL--SGAIRVNPWNVD 494 (854)
Q Consensus 418 aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l--~~ai~vnP~d~~ 494 (854)
.+|+.||+||.|| +|+ .+|||+| |.|+|++.. +|..+.+ ..|++++ .|++
T Consensus 270 ~~~~~ad~~v~~S--~g~---~lEA~a~---------------------G~PvI~~~~~~~~~~~~~~g~g~lv~-~d~~ 322 (376)
T 1v4v_A 270 ALMRASLLLVTDS--GGL---QEEGAAL---------------------GVPVVVLRNVTERPEGLKAGILKLAG-TDPE 322 (376)
T ss_dssp HHHHTEEEEEESC--HHH---HHHHHHT---------------------TCCEEECSSSCSCHHHHHHTSEEECC-SCHH
T ss_pred HHHHhCcEEEECC--cCH---HHHHHHc---------------------CCCEEeccCCCcchhhhcCCceEECC-CCHH
Confidence 9999999999999 665 7799999 348887754 4544444 3478885 4999
Q ss_pred HHHHHHHHHhcCCH
Q 003042 495 AVADAMDSALQMEN 508 (854)
Q Consensus 495 ~~A~ai~~aL~m~~ 508 (854)
++|++|.++|+.++
T Consensus 323 ~la~~i~~ll~d~~ 336 (376)
T 1v4v_A 323 GVYRVVKGLLENPE 336 (376)
T ss_dssp HHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHhChH
Confidence 99999999998654
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=3.2e-14 Score=167.50 Aligned_cols=171 Identities=13% Similarity=0.067 Sum_probs=135.0
Q ss_pred CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCc-c
Q 003042 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYE-P 403 (854)
Q Consensus 325 ~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~-p 403 (854)
+.++++++||+.+ ||+..+++||.++++++|+++ |+++|. +++..+++++. +.+ .+.. .
T Consensus 375 ~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~----l~i~G~----~g~~~~~l~~~----~~~-------~~l~~~ 434 (568)
T 2vsy_A 375 EQGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSV----LWLLSG----PGEADARLRAF----AHA-------QGVDAQ 434 (568)
T ss_dssp TTSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCE----EEEECC----STTHHHHHHHH----HHH-------TTCCGG
T ss_pred CCCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcE----EEEecC----CHHHHHHHHHH----HHH-------cCCChh
Confidence 4456779999999 999999999999999999876 777773 33444444444 433 3333 4
Q ss_pred EEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEE-------ecCc
Q 003042 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIV-------SEFI 476 (854)
Q Consensus 404 v~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~-------Se~~ 476 (854)
.+.|.|.++.+++..+|+.||+||+||.+ |||++++|||+| |.|+|+ |..+
T Consensus 435 ~v~~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~---------------------G~Pvv~~~g~~~~s~~~ 492 (568)
T 2vsy_A 435 RLVFMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWT---------------------GCPVLTTPGETFAARVA 492 (568)
T ss_dssp GEEEECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHT---------------------TCCEEBCCCSSGGGSHH
T ss_pred HEEeeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhC---------------------CCCEEeccCCCchHHHH
Confidence 45677789999999999999999999999 999999999999 458898 8888
Q ss_pred -------cccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccc---cccChHHHHHHHHHHHHHHHHhc
Q 003042 477 -------GCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI---SSHDVAYWAKSIDQDLERACRDH 545 (854)
Q Consensus 477 -------G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v---~~~~~~~W~~~~l~~l~~~~~~~ 545 (854)
|+.+.+.+ |+++++++|.++++.++ .++...++.++.+ ..+++..+++++.+.++++.+++
T Consensus 493 ~~~l~~~g~~e~v~~-------~~~~la~~i~~l~~~~~-~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~~ 563 (568)
T 2vsy_A 493 GSLNHHLGLDEMNVA-------DDAAFVAKAVALASDPA-ALTALHARVDVLRRASGVFHMDGFADDFGALLQALARRH 563 (568)
T ss_dssp HHHHHHHTCGGGBCS-------SHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCChhhhcC-------CHHHHHHHHHHHhcCHH-HHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 87776543 89999999999998664 4444555556666 67999999999998888876553
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.52 E-value=2.6e-14 Score=151.55 Aligned_cols=76 Identities=18% Similarity=0.237 Sum_probs=63.0
Q ss_pred EEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCC-cccHHHHHHhhhhcCCCCCCCCccEEEEEecCC-----Cc--
Q 003042 743 VEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDD-RSDEDMFESIEQAVADPSVPGIAEVFACTVGQK-----PS-- 814 (854)
Q Consensus 743 vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs-~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~-----~s-- 814 (854)
.|+.+.+.+|+.+++.+++++ |++++++++|||+ .||++|++.+|.. ++.|.+|.. +.
T Consensus 176 ~~~~~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~~Di~~~~~aG~~-----------~~~v~~g~~~~~~~~~~~ 241 (266)
T 3pdw_A 176 VQPVFIGKPESIIMEQAMRVL---GTDVSETLMVGDNYATDIMAGINAGMD-----------TLLVHTGVTKREHMTDDM 241 (266)
T ss_dssp CCCEECSTTSSHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHHTCE-----------EEEECCC------CCTTS
T ss_pred CCccccCCCCHHHHHHHHHHc---CCChhhEEEECCCcHHHHHHHHHCCCe-----------EEEECCCCCChHHHHhcC
Confidence 345677888999999999999 9999999999999 8999999999983 466777742 22
Q ss_pred -ccceEeCCHhHHHHHHHH
Q 003042 815 -MAKYYLDDTAEVINLLEG 832 (854)
Q Consensus 815 -~A~y~l~~~~eV~~~L~~ 832 (854)
.|+|++++..++.+-++.
T Consensus 242 ~~~d~v~~~~~el~~~~~~ 260 (266)
T 3pdw_A 242 EKPTHAIDSLTEWIPYIEG 260 (266)
T ss_dssp CCCSEEESSGGGGHHHHHH
T ss_pred CCCCEEeCCHHHHHHHhhc
Confidence 599999999998887764
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=3.7e-14 Score=156.82 Aligned_cols=259 Identities=14% Similarity=0.078 Sum_probs=162.4
Q ss_pred HHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHH
Q 003042 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHF 261 (854)
Q Consensus 182 ~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~F 261 (854)
++++..+| |+|++|..... ++..+..+..++|+.+..|..+|.. ...++. -.+|.+-..+.
T Consensus 90 ~~l~~~~p--Dvv~~~~~~~~-~~~~~~~~~~~~p~v~~~~~~~~~~--------~~~~~~--~~~d~v~~~~~------ 150 (364)
T 1f0k_A 90 AIMKAYKP--DVVLGMGGYVS-GPGGLAAWSLGIPVVLHEQNGIAGL--------TNKWLA--KIATKVMQAFP------ 150 (364)
T ss_dssp HHHHHHCC--SEEEECSSTTH-HHHHHHHHHTTCCEEEEECSSSCCH--------HHHHHT--TTCSEEEESST------
T ss_pred HHHHhcCC--CEEEEeCCcCc-hHHHHHHHHcCCCEEEEecCCCCcH--------HHHHHH--HhCCEEEecCh------
Confidence 34455677 89999965432 3344444445688888888766531 011110 12444332211
Q ss_pred HHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCE-EEEEecCccccCC
Q 003042 262 LSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKI-VILGVDDMDLFKG 340 (854)
Q Consensus 262 l~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~-iil~VdRld~~KG 340 (854)
. . + . ++.++|+|+|...+.. +.. ..++. .-.+++ +++.+||+.+.||
T Consensus 151 ---------------~-~----~-~---~~~~i~n~v~~~~~~~----~~~---~~~~~-~~~~~~~il~~~g~~~~~k~ 198 (364)
T 1f0k_A 151 ---------------G-A----F-P---NAEVVGNPVRTDVLAL----PLP---QQRLA-GREGPVRVLVVGGSQGARIL 198 (364)
T ss_dssp ---------------T-S----S-S---SCEECCCCCCHHHHTS----CCH---HHHHT-TCCSSEEEEEECTTTCCHHH
T ss_pred ---------------h-h----c-C---CceEeCCccchhhccc----chh---hhhcc-cCCCCcEEEEEcCchHhHHH
Confidence 0 0 1 1 3568899999876632 111 11110 113445 5666789999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHH
Q 003042 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYY 420 (854)
Q Consensus 341 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly 420 (854)
+..+++|++++.+ ++.++.+++ +++ .+++++ ++.+. +...|. +.+.+ +++..+|
T Consensus 199 ~~~li~a~~~l~~-------~~~~l~i~G----~~~-~~~l~~----~~~~~-------~~~~v~-~~g~~--~~~~~~~ 252 (364)
T 1f0k_A 199 NQTMPQVAAKLGD-------SVTIWHQSG----KGS-QQSVEQ----AYAEA-------GQPQHK-VTEFI--DDMAAAY 252 (364)
T ss_dssp HHHHHHHHHHHGG-------GEEEEEECC----TTC-HHHHHH----HHHHT-------TCTTSE-EESCC--SCHHHHH
T ss_pred HHHHHHHHHHhcC-------CcEEEEEcC----Cch-HHHHHH----HHhhc-------CCCceE-Eecch--hhHHHHH
Confidence 9999999988743 244433332 222 233333 33332 122344 44555 7899999
Q ss_pred HhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccc-------cC---CCceEeCC
Q 003042 421 AIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSP-------SL---SGAIRVNP 490 (854)
Q Consensus 421 ~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~-------~l---~~ai~vnP 490 (854)
+.||++|+|| | +++++|||+| |.|+|+|...|... .+ ..|++++|
T Consensus 253 ~~ad~~v~~s---g-~~~~~EAma~---------------------G~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~ 307 (364)
T 1f0k_A 253 AWADVVVCRS---G-ALTVSEIAAA---------------------GLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQ 307 (364)
T ss_dssp HHCSEEEECC---C-HHHHHHHHHH---------------------TCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCG
T ss_pred HhCCEEEECC---c-hHHHHHHHHh---------------------CCCEEEeeCCCCchhHHHHHHHHHhCCcEEEecc
Confidence 9999999999 4 8999999999 45999999887632 34 34899999
Q ss_pred CC--HHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHHHHHhc
Q 003042 491 WN--VDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERACRDH 545 (854)
Q Consensus 491 ~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 545 (854)
.| ++++|++|.++ .++.++...+..++++..+++...++.+.+.+++..+.|
T Consensus 308 ~d~~~~~la~~i~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~ 361 (364)
T 1f0k_A 308 PQLSVDAVANTLAGW---SRETLLTMAERARAASIPDATERVANEVSRVARALEHHH 361 (364)
T ss_dssp GGCCHHHHHHHHHTC---CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC----
T ss_pred ccCCHHHHHHHHHhc---CHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHhhc
Confidence 88 99999999987 555666666677778888888888888777776655544
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.6e-13 Score=153.45 Aligned_cols=246 Identities=12% Similarity=0.009 Sum_probs=151.9
Q ss_pred HHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHH-hhcCCeEeecCHHHHHH
Q 003042 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKS-LLNSDLIGFHTFDYARH 260 (854)
Q Consensus 182 ~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~-ll~~dligf~t~~~~~~ 260 (854)
++++..+| |+|+++.++++. .++.... . ++.+..+.--+.+ +.+. +-.+|.|-.++...++.
T Consensus 105 ~~l~~~~p--Div~~~~~~~~~--~~~~~~~-~-p~~~~~~~~~~~~-----------~~~~~~~~~d~ii~~S~~~~~~ 167 (374)
T 2xci_A 105 RFEELSKP--KALIVVEREFWP--SLIIFTK-V-PKILVNAYAKGSL-----------IEKILSKKFDLIIMRTQEDVEK 167 (374)
T ss_dssp HHHHHHCC--SEEEEESCCCCH--HHHHHCC-S-CEEEEEECCCCCH-----------HHHHHHTTCSEEEESCHHHHHH
T ss_pred HHHHHhCC--CEEEEECccCcH--HHHHHHh-C-CEEEEEeecCchH-----------HHHHHHHhCCEEEECCHHHHHH
Confidence 34566788 899988887664 3443221 1 4544433211111 2232 34589999999888776
Q ss_pred HHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCC
Q 003042 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKG 340 (854)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KG 340 (854)
|.+ +|+. +|.++|+|. |.... +. ++.+ .+++++++++ ..||
T Consensus 168 l~~-----~g~~-----------------ki~vi~n~~----f~~~~--~~--------~~~l-~~~vi~~~~~--~~k~ 208 (374)
T 2xci_A 168 FKT-----FGAK-----------------RVFSCGNLK----FICQK--GK--------GIKL-KGEFIVAGSI--HTGE 208 (374)
T ss_dssp HHT-----TTCC-----------------SEEECCCGG----GCCCC--CS--------CCCC-SSCEEEEEEE--CGGG
T ss_pred HHH-----cCCC-----------------eEEEcCCCc----cCCCc--Ch--------hhhh-cCCEEEEEeC--CCch
Confidence 643 1211 455677652 21100 00 0111 1257777776 3589
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHH-HHHHHHHHHHHHHHhhccC--CCCCccEEEEcCCCChhhHH
Q 003042 341 ISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDV-QDLLSDTNRIAEEINLNFG--KPGYEPIVIIKEPLSTQDKV 417 (854)
Q Consensus 341 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~-~~l~~~v~~~v~~In~~~~--~~~~~pv~~~~~~~~~~el~ 417 (854)
+..+++||.++.+++|+++ |+++| ++++. +++++ ++.+.+-.+. ..+. ..+++.+. .+|+.
T Consensus 209 ~~~ll~A~~~l~~~~p~~~----lvivG-----~g~~~~~~l~~----~~~~~gl~~~~~~~~~-~~v~~~~~--~~dl~ 272 (374)
T 2xci_A 209 VEIILKAFKEIKKTYSSLK----LILVP-----RHIENAKIFEK----KARDFGFKTSFFENLE-GDVILVDR--FGILK 272 (374)
T ss_dssp HHHHHHHHHHHHTTCTTCE----EEEEE-----SSGGGHHHHHH----HHHHTTCCEEETTCCC-SSEEECCS--SSCHH
T ss_pred HHHHHHHHHHHHhhCCCcE----EEEEC-----CCHHHHHHHHH----HHHHCCCceEEecCCC-CcEEEECC--HHHHH
Confidence 9999999999998899876 77776 23432 24443 4444322210 0000 23455543 47999
Q ss_pred HHHHhCcEEEEcc-CccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEe-cCccccccC----CCceEeCCC
Q 003042 418 PYYAIAECCVVNC-VRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS-EFIGCSPSL----SGAIRVNPW 491 (854)
Q Consensus 418 aly~~ADv~vv~S-~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l----~~ai~vnP~ 491 (854)
.+|+.||++++|| ..|++|++++||||| |.|+|++ +..|+.+.+ .+|.++.|.
T Consensus 273 ~~y~~aDv~vl~ss~~e~gg~~~lEAmA~---------------------G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~ 331 (374)
T 2xci_A 273 ELYPVGKIAIVGGTFVNIGGHNLLEPTCW---------------------GIPVIYGPYTHKVNDLKEFLEKEGAGFEVK 331 (374)
T ss_dssp HHGGGEEEEEECSSSSSSCCCCCHHHHTT---------------------TCCEEECSCCTTSHHHHHHHHHTTCEEECC
T ss_pred HHHHhCCEEEECCcccCCCCcCHHHHHHh---------------------CCCEEECCCccChHHHHHHHHHCCCEEEeC
Confidence 9999999988876 457789999999999 3477765 556666544 357888899
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHhccc
Q 003042 492 NVDAVADAMDSALQMENQEKILRHEKHYKYI 522 (854)
Q Consensus 492 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 522 (854)
|++++|++|.++|+. +.++.+.++.++++
T Consensus 332 d~~~La~ai~~ll~d--~~r~~mg~~ar~~~ 360 (374)
T 2xci_A 332 NETELVTKLTELLSV--KKEIKVEEKSREIK 360 (374)
T ss_dssp SHHHHHHHHHHHHHS--CCCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhH--HHHHHHHHHHHHHH
Confidence 999999999999985 44444455555444
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.48 E-value=3e-14 Score=151.18 Aligned_cols=72 Identities=15% Similarity=0.288 Sum_probs=61.0
Q ss_pred eeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCC-cccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC----c------
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDD-RSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP----S------ 814 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs-~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~----s------ 814 (854)
...+..|+.+++.+++++ |++++++++|||+ .||+.|++.+|.. ++.|.+|... .
T Consensus 183 ~~~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~~~~~g~~-----------~~~v~~g~~~~~~~~~~~~~~ 248 (268)
T 3qgm_A 183 VVVGKPSEVIMREALDIL---GLDAKDVAVVGDQIDVDVAAGKAIGAE-----------TVLVLTGVTTRENLDQMIERH 248 (268)
T ss_dssp EECSTTSHHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHHTCE-----------EEEESSSSCCTTTHHHHHHHH
T ss_pred eecCCCCHHHHHHHHHHh---CCCchhEEEECCCchHHHHHHHHCCCc-----------EEEECCCCCCHHHHHhhcccc
Confidence 556778999999999999 9999999999999 6999999999973 4677788642 1
Q ss_pred --ccceEeCCHhHHHHHHH
Q 003042 815 --MAKYYLDDTAEVINLLE 831 (854)
Q Consensus 815 --~A~y~l~~~~eV~~~L~ 831 (854)
.|+|++++..++.++|+
T Consensus 249 ~~~~d~v~~~~~el~~~l~ 267 (268)
T 3qgm_A 249 GLKPDYVFNSLKDMVEALE 267 (268)
T ss_dssp TCCCSEEESSHHHHHHTC-
T ss_pred CCCCCEEECCHHHHHHHHh
Confidence 68999999999988764
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.42 E-value=4.7e-14 Score=146.32 Aligned_cols=70 Identities=13% Similarity=0.119 Sum_probs=59.7
Q ss_pred EEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCC-cccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC--------
Q 003042 743 VEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDD-RSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP-------- 813 (854)
Q Consensus 743 vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs-~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~-------- 813 (854)
.|+.+.+.+|+.+++.+++++ |++++++++|||+ .||++|++.+|.. ++.|.+|...
T Consensus 169 ~~~~~~~kpk~~~~~~~~~~l---gi~~~~~i~iGD~~~nDi~~~~~aG~~-----------~~~v~~g~~~~~~~~~~~ 234 (250)
T 2c4n_A 169 RKPFYVGKPSPWIIRAALNKM---QAHSEETVIVGDNLRTDILAGFQAGLE-----------TILVLSGVSSLDDIDSMP 234 (250)
T ss_dssp CCCEECSTTSTHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHTTCE-----------EEEESSSSCCGGGGSSCS
T ss_pred CCceEeCCCCHHHHHHHHHHc---CCCcceEEEECCCchhHHHHHHHcCCe-----------EEEECCCCCChhhhhhcC
Confidence 356788999999999999999 9999999999999 7999999999984 4667777532
Q ss_pred cccceEeCCHhHH
Q 003042 814 SMAKYYLDDTAEV 826 (854)
Q Consensus 814 s~A~y~l~~~~eV 826 (854)
..|+|++++..++
T Consensus 235 ~~~~~v~~~~~el 247 (250)
T 2c4n_A 235 FRPSWIYPSVAEI 247 (250)
T ss_dssp SCCSEEESSGGGC
T ss_pred CCCCEEECCHHHh
Confidence 4688999988765
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=6.8e-13 Score=140.78 Aligned_cols=211 Identities=15% Similarity=0.179 Sum_probs=121.6
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEc---CCCccchhhhhcCCcccceeecCcEEEEEC
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVS---GRGKDSLGNWFSGVEKLGLSAEHGYFTRWS 659 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~T---GR~~~~l~~~~~~~~~l~liaenG~~I~~~ 659 (854)
++++.|+||+||||++ + ..+++.+.++|+++ ++.|+.++++| ||+...+.+.+.. +++....+.++..+
T Consensus 15 ~~~~~v~~DlDGTLl~---~-~~~~~~~~~~l~~l-~~~G~~~~~aTn~~gr~~~~~~~~~~~---lg~~~~~~~ii~~~ 86 (271)
T 1vjr_A 15 DKIELFILDMDGTFYL---D-DSLLPGSLEFLETL-KEKNKRFVFFTNNSSLGAQDYVRKLRN---MGVDVPDDAVVTSG 86 (271)
T ss_dssp GGCCEEEECCBTTTEE---T-TEECTTHHHHHHHH-HHTTCEEEEEESCTTSCHHHHHHHHHH---TTCCCCGGGEEEHH
T ss_pred cCCCEEEEcCcCcEEe---C-CEECcCHHHHHHHH-HHcCCeEEEEECCCCCCHHHHHHHHHH---cCCCCChhhEEcHH
Confidence 4679999999999999 4 55778899999999 88999999999 8888888777743 33321112222211
Q ss_pred CCcce-------E-EccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcC
Q 003042 660 KNSAW-------E-ICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLAN 731 (854)
Q Consensus 660 ~~~~~-------~-~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~ 731 (854)
+.... . ........... ..+..+ |............... +.........+.++.+ ..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~-----g~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l----~~ 151 (271)
T 1vjr_A 87 EITAEHMLKRFGRCRIFLLGTPQLK----KVFEAY-----GHVIDEENPDFVVLGF--DKTLTYERLKKACILL----RK 151 (271)
T ss_dssp HHHHHHHHHHHCSCEEEEESCHHHH----HHHHHT-----TCEECSSSCSEEEECC--CTTCCHHHHHHHHHHH----TT
T ss_pred HHHHHHHHHhCCCCeEEEEcCHHHH----HHHHHc-----CCccCCCCCCEEEEeC--CCCcCHHHHHHHHHHH----HC
Confidence 10000 0 00000000111 111111 1111000000011111 1111111122222222 11
Q ss_pred CCEEEEEcC------------------------eEEEE-eeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCC-cccHHH
Q 003042 732 EPVVVKRGQ------------------------HIVEV-KPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDD-RSDEDM 785 (854)
Q Consensus 732 ~~~~v~~g~------------------------~~vEI-~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs-~ND~~M 785 (854)
....+.++. ...|. .+.+.+|+.+++.+++++ |++++++++|||+ .||++|
T Consensus 152 ~~~~i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l---gi~~~e~i~iGD~~~nDi~~ 228 (271)
T 1vjr_A 152 GKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKF---GVPKERMAMVGDRLYTDVKL 228 (271)
T ss_dssp TCEEEESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHH---TCCGGGEEEEESCHHHHHHH
T ss_pred CCeEEEECCCccccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHh---CCCCceEEEECCCcHHHHHH
Confidence 111121111 11244 778889999999999999 9999999999999 599999
Q ss_pred HHHhhhhcCCCCCCCCccEEEEEecCCC--------cccceEeCCHhHHHHHH
Q 003042 786 FESIEQAVADPSVPGIAEVFACTVGQKP--------SMAKYYLDDTAEVINLL 830 (854)
Q Consensus 786 f~~ag~~~~~~~~~~~~~~~aV~vG~~~--------s~A~y~l~~~~eV~~~L 830 (854)
++.+|.. ++.|..|... ..++|++++..++.++|
T Consensus 229 a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l 270 (271)
T 1vjr_A 229 GKNAGIV-----------SILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 270 (271)
T ss_dssp HHHHTCE-----------EEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred HHHcCCe-----------EEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 9999984 4566666432 26899999999988776
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.40 E-value=6.1e-13 Score=140.99 Aligned_cols=207 Identities=13% Similarity=0.107 Sum_probs=115.4
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEc---CCCccchhhhhcCCcccceeecCcEEEEEC
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVS---GRGKDSLGNWFSGVEKLGLSAEHGYFTRWS 659 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~T---GR~~~~l~~~~~~~~~l~liaenG~~I~~~ 659 (854)
|++|+|+||+||||++ +++.+ +.+.++|+++ ++.|+.|+++| ||+...+...+. .+++....+.++..+
T Consensus 3 m~~kli~~DlDGTLl~---~~~~i-~~~~eal~~l-~~~G~~vvl~Tn~~gr~~~~~~~~l~---~lg~~~~~~~ii~~~ 74 (264)
T 3epr_A 3 LAYKGYLIDLDGTIYK---GKSRI-PAGERFIERL-QEKGIPYMLVTNNTTRTPESVQEMLR---GFNVETPLETIYTAT 74 (264)
T ss_dssp CCCCEEEECCBTTTEE---TTEEC-HHHHHHHHHH-HHHTCCEEEEECCCSSCHHHHHHHHH---TTTCCCCGGGEEEHH
T ss_pred CCCCEEEEeCCCceEe---CCEEC-cCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHH---HCCCCCChhheecHH
Confidence 4689999999999999 77788 8999999999 89999999999 677777666664 344432222222221
Q ss_pred CCcc--------eEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcC
Q 003042 660 KNSA--------WEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLAN 731 (854)
Q Consensus 660 ~~~~--------~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~ 731 (854)
+... ...........+ ...+..+ |..+........+. ..+..+......+....+. .
T Consensus 75 ~~~~~~l~~~~~~~~~~~~~~~~l----~~~l~~~-----g~~~~~~~~~~v~~--~~~~~~~~~~~~~~~~~l~----~ 139 (264)
T 3epr_A 75 MATVDYMNDMNRGKTAYVIGEEGL----KKAIADA-----GYVEDTKNPAYVVV--GLDWNVTYDKLATATLAIQ----N 139 (264)
T ss_dssp HHHHHHHHHHTCCSEEEEESCHHH----HHHHHHT-----TCEECSSSCSEEEE--CCCTTCCHHHHHHHHHHHH----T
T ss_pred HHHHHHHHHhCCCCeEEEECCHHH----HHHHHHc-----CCcccCCcCCEEEE--eCCCCCCHHHHHHHHHHHH----C
Confidence 1100 000000000011 1111110 11111111111111 1111111111122222221 1
Q ss_pred CCEEEEEcC--------e----------------EEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCC-cccHHHH
Q 003042 732 EPVVVKRGQ--------H----------------IVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDD-RSDEDMF 786 (854)
Q Consensus 732 ~~~~v~~g~--------~----------------~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs-~ND~~Mf 786 (854)
....+.... . ..+....+..|+.+++.+++++ |++++++++|||+ .||+.|+
T Consensus 140 ~~~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a 216 (264)
T 3epr_A 140 GALFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEIL---NIPRNQAVMVGDNYLTDIMAG 216 (264)
T ss_dssp TCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHSCCCEECSTTSHHHHHHHHHHH---TSCGGGEEEEESCTTTHHHHH
T ss_pred CCeEEEEcCCccccCCCceecCccHHHHHHHHHhCCCcccCCCCCHHHHHHHHHHh---CcCcccEEEECCCcHHHHHHH
Confidence 111111110 0 1233445666778899999999 9999999999999 7999999
Q ss_pred HHhhhhcCCCCCCCCccEEEEEecCCC--------cccceEeCCHhHH
Q 003042 787 ESIEQAVADPSVPGIAEVFACTVGQKP--------SMAKYYLDDTAEV 826 (854)
Q Consensus 787 ~~ag~~~~~~~~~~~~~~~aV~vG~~~--------s~A~y~l~~~~eV 826 (854)
+.+|.. .+.|.+|... ..++|++++..++
T Consensus 217 ~~aG~~-----------~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l 253 (264)
T 3epr_A 217 INNDID-----------TLLVTTGFTTVEEVPDLPIQPSYVLASLDEW 253 (264)
T ss_dssp HHHTCE-----------EEEETTSSSCGGGGGGCSSCCSEEESCGGGC
T ss_pred HHCCCe-----------EEEECCCCCChHHHHhcCCCCCEEECCHHHH
Confidence 999973 4667777431 1688999887663
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.8e-13 Score=144.17 Aligned_cols=77 Identities=22% Similarity=0.264 Sum_probs=64.7
Q ss_pred EEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEEEecCC--------Cc
Q 003042 744 EVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFACTVGQK--------PS 814 (854)
Q Consensus 744 EI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~--------~s 814 (854)
|+.+.+.+|+.+++.+++++ |++++++++|||+. ||++|++.+|.. ++.|..|.. ..
T Consensus 184 ~~~~~~kpk~~~~~~~~~~l---gi~~~~~i~iGD~~~nDi~~a~~aG~~-----------~~~v~~g~~~~~~~~~~~~ 249 (271)
T 2x4d_A 184 KAEVVGKPSPEFFKSALQAI---GVEAHQAVMIGDDIVGDVGGAQRCGMR-----------ALQVRTGKFRPSDEHHPEV 249 (271)
T ss_dssp CCEEESTTCHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEESSTTCCGGGGGCSSC
T ss_pred ceeeccCCCHHHHHHHHHHh---CCCcceEEEECCCcHHHHHHHHHCCCc-----------EEEEcCCCCCchhhcccCC
Confidence 55677889999999999999 99999999999998 999999999984 466777731 13
Q ss_pred ccceEeCCHhHHHHHHHHHH
Q 003042 815 MAKYYLDDTAEVINLLEGLA 834 (854)
Q Consensus 815 ~A~y~l~~~~eV~~~L~~l~ 834 (854)
.|++++++..++.++|..+.
T Consensus 250 ~~~~~~~~~~el~~~l~~~~ 269 (271)
T 2x4d_A 250 KADGYVDNLAEAVDLLLQHA 269 (271)
T ss_dssp CCSEEESSHHHHHHHHHHHC
T ss_pred CCCEEeCCHHHHHHHHHhhc
Confidence 48899999999988886653
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.7e-11 Score=138.01 Aligned_cols=252 Identities=17% Similarity=0.156 Sum_probs=157.9
Q ss_pred HHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHh--hcCCeEeecCHHHHHH
Q 003042 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL--LNSDLIGFHTFDYARH 260 (854)
Q Consensus 183 i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~l--l~~dligf~t~~~~~~ 260 (854)
+++..+| |+|.+|+.-...+|..+..+..++|++. .|.+..+...+. |+.+++.+-+ -.+|++-..+....++
T Consensus 106 ~l~~~kP--DvVi~~g~~~~~~~~~~aa~~~~IPv~h-~~ag~rs~~~~~--~~~~~~~r~~~~~~a~~~~~~se~~~~~ 180 (396)
T 3dzc_A 106 VLSSEQP--DVVLVHGDTATTFAASLAAYYQQIPVGH-VEAGLRTGNIYS--PWPEEGNRKLTAALTQYHFAPTDTSRAN 180 (396)
T ss_dssp HHHHHCC--SEEEEETTSHHHHHHHHHHHTTTCCEEE-ETCCCCCSCTTS--STTHHHHHHHHHHTCSEEEESSHHHHHH
T ss_pred HHHhcCC--CEEEEECCchhHHHHHHHHHHhCCCEEE-EECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHHH
Confidence 4456688 8999998777777766766677888764 343333322222 4556777665 3579998888888777
Q ss_pred HHHHHHhhhCccccccCceeeEEECCeEEEEEEecc-ccCchHHHhhhCCchHHHHHHHHHHHcC----CCE-EEEEecC
Q 003042 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPV-GIHMGQFESIMSLDVTGQKVKELKEKFD----GKI-VILGVDD 334 (854)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~-GId~~~~~~~~~~~~~~~~~~~l~~~~~----~~~-iil~VdR 334 (854)
|.+ .|+.. . +|.+.++ ++|...+..... ........+++++++ +++ +++..+|
T Consensus 181 l~~-----~G~~~--~-------------ki~vvGn~~~d~~~~~~~~~-~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR 239 (396)
T 3dzc_A 181 LLQ-----ENYNA--E-------------NIFVTGNTVIDALLAVREKI-HTDMDLQATLESQFPMLDASKKLILVTGHR 239 (396)
T ss_dssp HHH-----TTCCG--G-------------GEEECCCHHHHHHHHHHHHH-HHCHHHHHHHHHTCTTCCTTSEEEEEECSC
T ss_pred HHH-----cCCCc--C-------------cEEEECCcHHHHHHHhhhhc-ccchhhHHHHHHHhCccCCCCCEEEEEECC
Confidence 764 24321 1 2334443 556433321100 000011255666653 345 4556767
Q ss_pred ccc-cCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCh
Q 003042 335 MDL-FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLST 413 (854)
Q Consensus 335 ld~-~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~ 413 (854)
... .||+..+++|++++.+++|+++ +|.++.+ ++ .+++.+++.. + ....+ .+.+++++
T Consensus 240 ~~~~~~~~~~ll~A~~~l~~~~~~~~----~v~~~g~----~~---~~~~~l~~~~-------~--~~~~v-~~~~~lg~ 298 (396)
T 3dzc_A 240 RESFGGGFERICQALITTAEQHPECQ----ILYPVHL----NP---NVREPVNKLL-------K--GVSNI-VLIEPQQY 298 (396)
T ss_dssp BCCCTTHHHHHHHHHHHHHHHCTTEE----EEEECCB----CH---HHHHHHHHHT-------T--TCTTE-EEECCCCH
T ss_pred cccchhHHHHHHHHHHHHHHhCCCce----EEEEeCC----Ch---HHHHHHHHHH-------c--CCCCE-EEeCCCCH
Confidence 654 4889999999999999998754 5544322 12 2333443321 1 11234 45567888
Q ss_pred hhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEe-cCccccccC--CCceEeCC
Q 003042 414 QDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS-EFIGCSPSL--SGAIRVNP 490 (854)
Q Consensus 414 ~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l--~~ai~vnP 490 (854)
.++..+|+.||++|.+| | |++ .||++| +.|+|++ +.++..+.+ ..+++|.+
T Consensus 299 ~~~~~l~~~ad~vv~~S---G-g~~-~EA~a~---------------------G~PvV~~~~~~~~~e~v~~G~~~lv~~ 352 (396)
T 3dzc_A 299 LPFVYLMDRAHIILTDS---G-GIQ-EEAPSL---------------------GKPVLVMRETTERPEAVAAGTVKLVGT 352 (396)
T ss_dssp HHHHHHHHHCSEEEESC---S-GGG-TTGGGG---------------------TCCEEECCSSCSCHHHHHHTSEEECTT
T ss_pred HHHHHHHHhcCEEEECC---c-cHH-HHHHHc---------------------CCCEEEccCCCcchHHHHcCceEEcCC
Confidence 99999999999999999 6 555 899999 3488888 555554444 23566654
Q ss_pred CCHHHHHHHHHHHhcCCH
Q 003042 491 WNVDAVADAMDSALQMEN 508 (854)
Q Consensus 491 ~d~~~~A~ai~~aL~m~~ 508 (854)
|.++++++|.++|..++
T Consensus 353 -d~~~l~~ai~~ll~d~~ 369 (396)
T 3dzc_A 353 -NQQQICDALSLLLTDPQ 369 (396)
T ss_dssp -CHHHHHHHHHHHHHCHH
T ss_pred -CHHHHHHHHHHHHcCHH
Confidence 89999999999998654
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=1.5e-12 Score=129.86 Aligned_cols=139 Identities=19% Similarity=0.256 Sum_probs=104.7
Q ss_pred cCCeEEEEecCCCCCCCCCC---C----CCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEE
Q 003042 583 TNSRLILLDYDGTVMPQTSE---D----KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYF 655 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~---~----~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~ 655 (854)
+++|+|+||+||||++.... . ..+++.+.++|++| ++.|+.++++|||+...+..++. .+++.. ++
T Consensus 6 ~~ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L-~~~G~~~~i~Tg~~~~~~~~~~~---~lgl~~---~~ 78 (180)
T 1k1e_A 6 ENIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKML-MDADIQVAVLSGRDSPILRRRIA---DLGIKL---FF 78 (180)
T ss_dssp GGCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHH-HHTTCEEEEEESCCCHHHHHHHH---HHTCCE---EE
T ss_pred hCCeEEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHH-HHCCCeEEEEeCCCcHHHHHHHH---HcCCce---ee
Confidence 45899999999999982100 1 13567889999999 88999999999999888877763 233210 00
Q ss_pred EEECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEE
Q 003042 656 TRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVV 735 (854)
Q Consensus 656 I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~ 735 (854)
++
T Consensus 79 ---~~--------------------------------------------------------------------------- 80 (180)
T 1k1e_A 79 ---LG--------------------------------------------------------------------------- 80 (180)
T ss_dssp ---ES---------------------------------------------------------------------------
T ss_pred ---cC---------------------------------------------------------------------------
Confidence 00
Q ss_pred EEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC---
Q 003042 736 VKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK--- 812 (854)
Q Consensus 736 v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~--- 812 (854)
..+|+.+++.+++++ |++++++++|||+.||++|++.+|. ++.+++.
T Consensus 81 -------------~k~k~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~~~~ag~--------------~~~~~~~~~~ 130 (180)
T 1k1e_A 81 -------------KLEKETACFDLMKQA---GVTAEQTAYIGDDSVDLPAFAACGT--------------SFAVADAPIY 130 (180)
T ss_dssp -------------CSCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHH
T ss_pred -------------CCCcHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcCC--------------eEEeCCccHH
Confidence 045999999999999 9999999999999999999999986 4556654
Q ss_pred -CcccceEeCCH--hHHH-HHHHHHHhc
Q 003042 813 -PSMAKYYLDDT--AEVI-NLLEGLATE 836 (854)
Q Consensus 813 -~s~A~y~l~~~--~eV~-~~L~~l~~~ 836 (854)
+..|+|++.+. .++. .+++.+...
T Consensus 131 ~~~~ad~v~~~~~~~g~~~~~~~~~l~~ 158 (180)
T 1k1e_A 131 VKNAVDHVLSTHGGKGAFREMSDMILQA 158 (180)
T ss_dssp HHTTSSEECSSCTTTTHHHHHHHHHHHH
T ss_pred HHhhCCEEecCCCCCcHHHHHHHHHHHh
Confidence 36799998764 4566 666666554
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.3e-10 Score=131.15 Aligned_cols=268 Identities=15% Similarity=0.151 Sum_probs=161.9
Q ss_pred HHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhc--CCeEeecCHHHHHH
Q 003042 183 VMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLN--SDLIGFHTFDYARH 260 (854)
Q Consensus 183 i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~--~dligf~t~~~~~~ 260 (854)
+++..+| |+|.+|+.-...++..+..+..++|++ ..|.+.-+...|+ |+++++.+-++. +|++-..+.++.++
T Consensus 109 ~l~~~kP--D~Vi~~gd~~~~l~~~laA~~~~IPv~-h~~aglrs~~~~~--~~p~~~~r~~~~~~a~~~~~~se~~~~~ 183 (403)
T 3ot5_A 109 VIAAENP--DIVLVHGDTTTSFAAGLATFYQQKMLG-HVEAGLRTWNKYS--PFPEEMNRQLTGVMADIHFSPTKQAKEN 183 (403)
T ss_dssp HHHHHCC--SEEEEETTCHHHHHHHHHHHHTTCEEE-EESCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHH
T ss_pred HHHHcCC--CEEEEECCchhHHHHHHHHHHhCCCEE-EEECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHHH
Confidence 4456688 899999976666665565556688875 3343332322222 455666665433 79988888888888
Q ss_pred HHHHHHhhhCccccccCceeeEEECCeEEEEEEec-cccCchHHHhhhCCchHHHHHHHHHHHcC-CCEEEEEecCccc-
Q 003042 261 FLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILP-VGIHMGQFESIMSLDVTGQKVKELKEKFD-GKIVILGVDDMDL- 337 (854)
Q Consensus 261 Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p-~GId~~~~~~~~~~~~~~~~~~~l~~~~~-~~~iil~VdRld~- 337 (854)
|.+ .|+.. + +|.+.+ +++|...+....... .+.++++. ++.+++.++|...
T Consensus 184 l~~-----~Gi~~--~-------------~i~vvGn~~~D~~~~~~~~~~~------~~~~~~l~~~~~vlv~~~r~~~~ 237 (403)
T 3ot5_A 184 LLA-----EGKDP--A-------------TIFVTGNTAIDALKTTVQKDYH------HPILENLGDNRLILMTAHRRENL 237 (403)
T ss_dssp HHH-----TTCCG--G-------------GEEECCCHHHHHHHHHSCTTCC------CHHHHSCTTCEEEEECCCCHHHH
T ss_pred HHH-----cCCCc--c-------------cEEEeCCchHHHHHhhhhhhcc------hHHHHhccCCCEEEEEeCccccc
Confidence 765 24321 1 233343 366654443111000 01222233 3456677888765
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHH
Q 003042 338 FKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKV 417 (854)
Q Consensus 338 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~ 417 (854)
-|++...++|+.++.+++|+++ +|.++.+. + .+++.+++.. + ....+ .+.++++..++.
T Consensus 238 ~~~l~~ll~a~~~l~~~~~~~~----~v~~~~~~----~---~~~~~l~~~~---~------~~~~v-~l~~~l~~~~~~ 296 (403)
T 3ot5_A 238 GEPMQGMFEAVREIVESREDTE----LVYPMHLN----P---AVREKAMAIL---G------GHERI-HLIEPLDAIDFH 296 (403)
T ss_dssp TTHHHHHHHHHHHHHHHCTTEE----EEEECCSC----H---HHHHHHHHHH---T------TCTTE-EEECCCCHHHHH
T ss_pred CcHHHHHHHHHHHHHHhCCCce----EEEecCCC----H---HHHHHHHHHh---C------CCCCE-EEeCCCCHHHHH
Confidence 3789999999999999999754 55544321 2 2333333321 1 11234 455678889999
Q ss_pred HHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEe-cCccccccC--CCceEeCCCCHH
Q 003042 418 PYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS-EFIGCSPSL--SGAIRVNPWNVD 494 (854)
Q Consensus 418 aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l--~~ai~vnP~d~~ 494 (854)
.+|+.||++|.+| | | +..||++| +.|+|++ ..++..+.+ ..+++|.+ |.+
T Consensus 297 ~l~~~ad~vv~~S---G-g-~~~EA~a~---------------------g~PvV~~~~~~~~~e~v~~g~~~lv~~-d~~ 349 (403)
T 3ot5_A 297 NFLRKSYLVFTDS---G-G-VQEEAPGM---------------------GVPVLVLRDTTERPEGIEAGTLKLIGT-NKE 349 (403)
T ss_dssp HHHHHEEEEEECC---H-H-HHHHGGGT---------------------TCCEEECCSSCSCHHHHHHTSEEECCS-CHH
T ss_pred HHHHhcCEEEECC---c-c-HHHHHHHh---------------------CCCEEEecCCCcchhheeCCcEEEcCC-CHH
Confidence 9999999999888 2 3 33899999 3488887 445544444 33677766 999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHH
Q 003042 495 AVADAMDSALQMENQEKILRHEKHYKYISSHDVAYW 530 (854)
Q Consensus 495 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W 530 (854)
+++++|.++|..++ .++.+.+....|-..+...+.
T Consensus 350 ~l~~ai~~ll~~~~-~~~~m~~~~~~~g~~~aa~rI 384 (403)
T 3ot5_A 350 NLIKEALDLLDNKE-SHDKMAQAANPYGDGFAANRI 384 (403)
T ss_dssp HHHHHHHHHHHCHH-HHHHHHHSCCTTCCSCHHHHH
T ss_pred HHHHHHHHHHcCHH-HHHHHHhhcCcccCCcHHHHH
Confidence 99999999998654 333333333444333333333
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.23 E-value=9.1e-14 Score=152.76 Aligned_cols=67 Identities=16% Similarity=0.153 Sum_probs=54.4
Q ss_pred EeeCCcchHHHHHHHHHHHhhCCCCCCe----EEEEeCCcccHHHHHHh----hhhcCCCCCCCCccEEEEEecCC----
Q 003042 745 VKPQGVSKGIVVKNLISTMRSRGKSPDF----VLCIGDDRSDEDMFESI----EQAVADPSVPGIAEVFACTVGQK---- 812 (854)
Q Consensus 745 I~p~gvsKg~al~~ll~~l~~~gi~~d~----vlaiGDs~ND~~Mf~~a----g~~~~~~~~~~~~~~~aV~vG~~---- 812 (854)
+.+.+++|+.+++.+ ++++ +++|||+.||++||+.+ |. +|+| +.
T Consensus 201 i~~~g~~K~~al~gi---------~~~~~~~~via~GDs~NDi~ml~~A~~~~g~--------------~vam-na~~~l 256 (332)
T 1y8a_A 201 KAVGAGEKAKIMRGY---------CESKGIDFPVVVGDSISDYKMFEAARGLGGV--------------AIAF-NGNEYA 256 (332)
T ss_dssp BCCCHHHHHHHHHHH---------HHHHTCSSCEEEECSGGGHHHHHHHHHTTCE--------------EEEE-SCCHHH
T ss_pred ecCCCCCHHHHHhcc---------ChhhcCceEEEEeCcHhHHHHHHHHhhcCCe--------------EEEe-cCCHHH
Confidence 889999999999832 3456 99999999999999999 85 4555 43
Q ss_pred CcccceEeCC--HhHHHHHHHHHHh
Q 003042 813 PSMAKYYLDD--TAEVINLLEGLAT 835 (854)
Q Consensus 813 ~s~A~y~l~~--~~eV~~~L~~l~~ 835 (854)
+..|+|++.+ .++|.++|+.+..
T Consensus 257 k~~Ad~v~~~~~~dGV~~~l~~~~~ 281 (332)
T 1y8a_A 257 LKHADVVIISPTAMSEAKVIELFME 281 (332)
T ss_dssp HTTCSEEEECSSTHHHHHHHHHHHH
T ss_pred HhhCcEEecCCCCCHHHHHHHHHHH
Confidence 4689999865 7889999998763
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.23 E-value=2.7e-11 Score=126.98 Aligned_cols=72 Identities=14% Similarity=0.138 Sum_probs=59.6
Q ss_pred eCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEEEecCC--------Ccccc
Q 003042 747 PQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFACTVGQK--------PSMAK 817 (854)
Q Consensus 747 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~--------~s~A~ 817 (854)
..+..|+.+++.+++++ |++++++++|||+. ||+.|++.+|.. ++.|..|.. ...++
T Consensus 176 ~~~Kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~ 241 (259)
T 2ho4_A 176 VVGKPEKTFFLEALRDA---DCAPEEAVMIGDDCRDDVDGAQNIGML-----------GILVKTGKYKAADEEKINPPPY 241 (259)
T ss_dssp ECSTTSHHHHHHHGGGG---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEESSTTCCTTGGGGSSSCCS
T ss_pred EecCCCHHHHHHHHHHc---CCChHHEEEECCCcHHHHHHHHHCCCc-----------EEEECCCCCCcccccccCCCCC
Confidence 34567899999999999 99999999999998 999999999973 466666631 24588
Q ss_pred eEeCCHhHHHHHHHH
Q 003042 818 YYLDDTAEVINLLEG 832 (854)
Q Consensus 818 y~l~~~~eV~~~L~~ 832 (854)
+++++..++.++|..
T Consensus 242 ~~~~~l~~l~~~l~~ 256 (259)
T 2ho4_A 242 LTCESFPHAVDHILQ 256 (259)
T ss_dssp EEESCHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHH
Confidence 999999999887754
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.22 E-value=2.8e-11 Score=119.35 Aligned_cols=69 Identities=16% Similarity=0.165 Sum_probs=55.7
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeCCH--h
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDDT--A 824 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~~--~ 824 (854)
+|+.+++.+++++ |++++++++|||+.||++|++.+|. ++++++. +..|+|++.+. +
T Consensus 83 ~K~~~l~~~~~~~---gi~~~~~~~vGD~~nDi~~~~~ag~--------------~~a~~na~~~~k~~Ad~v~~~~~~~ 145 (168)
T 3ewi_A 83 DKLATVDEWRKEM---GLCWKEVAYLGNEVSDEECLKRVGL--------------SAVPADACSGAQKAVGYICKCSGGR 145 (168)
T ss_dssp CHHHHHHHHHHHT---TCCGGGEEEECCSGGGHHHHHHSSE--------------EEECTTCCHHHHTTCSEECSSCTTT
T ss_pred ChHHHHHHHHHHc---CcChHHEEEEeCCHhHHHHHHHCCC--------------EEEeCChhHHHHHhCCEEeCCCCCc
Confidence 4999999999999 9999999999999999999999985 5777765 57899998653 3
Q ss_pred H-HHHHHHHHHhc
Q 003042 825 E-VINLLEGLATE 836 (854)
Q Consensus 825 e-V~~~L~~l~~~ 836 (854)
+ +.++++.+...
T Consensus 146 G~~~~~~~~il~~ 158 (168)
T 3ewi_A 146 GAIREFAEHIFLL 158 (168)
T ss_dssp THHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHh
Confidence 4 44555555543
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.21 E-value=2.3e-11 Score=118.66 Aligned_cols=139 Identities=17% Similarity=0.200 Sum_probs=101.5
Q ss_pred hcCCeEEEEecCCCCCCCCC---CC----CCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcE
Q 003042 582 KTNSRLILLDYDGTVMPQTS---ED----KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGY 654 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~---~~----~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~ 654 (854)
.+++|+|+||+||||++... .. ..+++.+.++|++| ++.|+.++|+||++...+..++. .+++.. +
T Consensus 6 ~~~~k~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~~~i~T~~~~~~~~~~l~---~~gl~~---~ 78 (162)
T 2p9j_A 6 VKKLKLLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLL-QKMGITLAVISGRDSAPLITRLK---ELGVEE---I 78 (162)
T ss_dssp HHHCCEEEECCTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHH-HTTTCEEEEEESCCCHHHHHHHH---HTTCCE---E
T ss_pred ccceeEEEEecCcceECCceeecCCCceeeeecccHHHHHHHH-HHCCCEEEEEeCCCcHHHHHHHH---HcCCHh---h
Confidence 34589999999999997210 01 22467788999999 88999999999999888877773 222210 0
Q ss_pred EEEECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCE
Q 003042 655 FTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPV 734 (854)
Q Consensus 655 ~I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~ 734 (854)
+ .
T Consensus 79 ~---------~--------------------------------------------------------------------- 80 (162)
T 2p9j_A 79 Y---------T--------------------------------------------------------------------- 80 (162)
T ss_dssp E---------E---------------------------------------------------------------------
T ss_pred c---------c---------------------------------------------------------------------
Confidence 0 0
Q ss_pred EEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC--
Q 003042 735 VVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK-- 812 (854)
Q Consensus 735 ~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~-- 812 (854)
.+..|+.+++.+++.+ |++++++++|||+.||++|++.+|. .+.+++.
T Consensus 81 -------------~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~ag~--------------~~~~~~~~~ 130 (162)
T 2p9j_A 81 -------------GSYKKLEIYEKIKEKY---SLKDEEIGFIGDDVVDIEVMKKVGF--------------PVAVRNAVE 130 (162)
T ss_dssp -------------CC--CHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCH
T ss_pred -------------CCCCCHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCC--------------eEEecCccH
Confidence 0244899999999998 9999999999999999999999986 3445443
Q ss_pred --CcccceEeCCHhH--HH-HHHHHHHh
Q 003042 813 --PSMAKYYLDDTAE--VI-NLLEGLAT 835 (854)
Q Consensus 813 --~s~A~y~l~~~~e--V~-~~L~~l~~ 835 (854)
...|+|++++..+ ++ ++++.+.+
T Consensus 131 ~~~~~a~~v~~~~~~~g~~~~~~~~~~~ 158 (162)
T 2p9j_A 131 EVRKVAVYITQRNGGEGALREVAELIHF 158 (162)
T ss_dssp HHHHHCSEECSSCSSSSHHHHHHHHHHH
T ss_pred HHHhhCCEEecCCCCCcHHHHHHHHHHH
Confidence 3568999987543 34 66766654
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.20 E-value=7.2e-12 Score=128.19 Aligned_cols=77 Identities=17% Similarity=0.144 Sum_probs=65.5
Q ss_pred EeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------Ccccce
Q 003042 745 VKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------PSMAKY 818 (854)
Q Consensus 745 I~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------~s~A~y 818 (854)
..+.+..|+.+++.+++++ |++++++++|||+.||++|++.+|.. +++|++|+. +..|+|
T Consensus 137 ~~~~~kp~~~~~~~~~~~l---gi~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~ad~ 202 (226)
T 3mc1_A 137 LDGKLSTKEDVIRYAMESL---NIKSDDAIMIGDREYDVIGALKNNLP-----------SIGVTYGFGSYEELKNAGANY 202 (226)
T ss_dssp TTSSSCSHHHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHTTTCC-----------EEEESSSSSCHHHHHHHTCSE
T ss_pred CCCCCCCCHHHHHHHHHHh---CcCcccEEEECCCHHHHHHHHHCCCC-----------EEEEccCCCCHHHHHHcCCCE
Confidence 3466788999999999999 99999999999999999999999973 577888864 367999
Q ss_pred EeCCHhHHHHHHHHHHh
Q 003042 819 YLDDTAEVINLLEGLAT 835 (854)
Q Consensus 819 ~l~~~~eV~~~L~~l~~ 835 (854)
++++.+++.++|.....
T Consensus 203 v~~s~~el~~~~~~~~~ 219 (226)
T 3mc1_A 203 IVNSVDELHKKILELRE 219 (226)
T ss_dssp EESSHHHHHHHHHTC--
T ss_pred EECCHHHHHHHHHHHhc
Confidence 99999999988875543
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.18 E-value=1.4e-11 Score=122.46 Aligned_cols=68 Identities=19% Similarity=0.238 Sum_probs=54.1
Q ss_pred cchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeCC--H
Q 003042 750 VSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDD--T 823 (854)
Q Consensus 750 vsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~--~ 823 (854)
.+|+.+++.+++.+ |++++++++|||+.||++|++.+|. +|++|+. +..|++++.+ .
T Consensus 85 ~~k~~~l~~~~~~~---~~~~~~~~~vGD~~nD~~~~~~ag~--------------~v~~~~~~~~~~~~ad~v~~~~~~ 147 (176)
T 3mmz_A 85 DRKDLALKQWCEEQ---GIAPERVLYVGNDVNDLPCFALVGW--------------PVAVASAHDVVRGAARAVTTVPGG 147 (176)
T ss_dssp SCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTCCHHHHHHSSEECSSCTT
T ss_pred CChHHHHHHHHHHc---CCCHHHEEEEcCCHHHHHHHHHCCC--------------eEECCChhHHHHHhCCEEecCCCC
Confidence 55999999999999 9999999999999999999999985 6777764 3578999876 3
Q ss_pred hHHHHHHHHHH
Q 003042 824 AEVINLLEGLA 834 (854)
Q Consensus 824 ~eV~~~L~~l~ 834 (854)
+++++.+..+.
T Consensus 148 ~g~~~~l~~~l 158 (176)
T 3mmz_A 148 DGAIREIASWI 158 (176)
T ss_dssp TTHHHHHHHHH
T ss_pred CcHHHHHHHHH
Confidence 34444444333
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.18 E-value=1.6e-10 Score=118.83 Aligned_cols=73 Identities=15% Similarity=0.094 Sum_probs=61.0
Q ss_pred eCCcchHHHHHHHHHHHhhCCCCCC-eEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC-cccceEeCCHh
Q 003042 747 PQGVSKGIVVKNLISTMRSRGKSPD-FVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP-SMAKYYLDDTA 824 (854)
Q Consensus 747 p~gvsKg~al~~ll~~l~~~gi~~d-~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~-s~A~y~l~~~~ 824 (854)
..+..|+.+++.+++++ |++++ ++++|||+.||+.|++.+|. -+|.+|+.. ..+.+.+++..
T Consensus 156 ~~~Kp~~~~~~~~~~~l---gi~~~~~~v~vGD~~~Di~~a~~aG~-------------~~v~~~~~~~~~~~~~~~~~~ 219 (231)
T 3kzx_A 156 GTIKPSPEPVLAALTNI---NIEPSKEVFFIGDSISDIQSAIEAGC-------------LPIKYGSTNIIKDILSFKNFY 219 (231)
T ss_dssp SCCTTSSHHHHHHHHHH---TCCCSTTEEEEESSHHHHHHHHHTTC-------------EEEEECC-----CCEEESSHH
T ss_pred CCCCCChHHHHHHHHHc---CCCcccCEEEEcCCHHHHHHHHHCCC-------------eEEEECCCCCCCCceeeCCHH
Confidence 34556789999999999 99998 99999999999999999996 367778764 48889999999
Q ss_pred HHHHHHHHHHh
Q 003042 825 EVINLLEGLAT 835 (854)
Q Consensus 825 eV~~~L~~l~~ 835 (854)
++.++|.++.+
T Consensus 220 el~~~l~~~l~ 230 (231)
T 3kzx_A 220 DIRNFICQLIN 230 (231)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 99999998865
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=7.4e-11 Score=127.81 Aligned_cols=72 Identities=17% Similarity=0.220 Sum_probs=57.4
Q ss_pred eeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC-----------
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFACTVGQKP----------- 813 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~----------- 813 (854)
...+..|+.+++.+++.+ |++++++++|||+. ||+.|++.+|.. ++.|..|...
T Consensus 211 ~~~~KP~~~~~~~~~~~l---gi~~~e~l~vGD~~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~ 276 (306)
T 2oyc_A 211 LVVGKPSPYMFECITENF---SIDPARTLMVGDRLETDILFGHRCGMT-----------TVLTLTGVSRLEEAQAYLAAG 276 (306)
T ss_dssp EECSTTSTHHHHHHHHHS---CCCGGGEEEEESCTTTHHHHHHHHTCE-----------EEEESSSSCCHHHHHHHHHTT
T ss_pred eeeCCCCHHHHHHHHHHc---CCChHHEEEECCCchHHHHHHHHCCCe-----------EEEECCCCCCHHHHHhhhccc
Confidence 355777888999999999 99999999999995 999999999984 3556666421
Q ss_pred ---cccceEeCCHhHHHHHHH
Q 003042 814 ---SMAKYYLDDTAEVINLLE 831 (854)
Q Consensus 814 ---s~A~y~l~~~~eV~~~L~ 831 (854)
..++|++++..++.++|+
T Consensus 277 ~~~~~pd~vi~~l~el~~~l~ 297 (306)
T 2oyc_A 277 QHDLVPHYYVESIADLTEGLE 297 (306)
T ss_dssp CGGGSCSEEESSGGGGGGGC-
T ss_pred ccCCCCCEEECCHHHHHHHHH
Confidence 367899999888766554
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=1.2e-10 Score=116.98 Aligned_cols=143 Identities=19% Similarity=0.237 Sum_probs=102.8
Q ss_pred HhhcCCeEEEEecCCCCCCCCC---CCC----CCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecC
Q 003042 580 YNKTNSRLILLDYDGTVMPQTS---EDK----RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEH 652 (854)
Q Consensus 580 y~~~~~klI~~DlDGTLl~~~~---~~~----~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaen 652 (854)
++..++|+|+||+||||++... ... ........+|++| ++.|+.++|+||++...+..++. .+++..
T Consensus 21 ~~~~~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d~~~l~~L-~~~g~~v~ivT~~~~~~~~~~l~---~lgl~~-- 94 (188)
T 2r8e_A 21 AKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCA-LTSDIEVAIITGRKAKLVEDRCA---TLGITH-- 94 (188)
T ss_dssp HHHHTCSEEEECCCCCCBCSEEEEETTSCEEEEEEHHHHHHHHHH-HTTTCEEEEECSSCCHHHHHHHH---HHTCCE--
T ss_pred HHHhcCCEEEEeCCCCcCCCCEEecCCCcEEEEeecccHHHHHHH-HHCCCeEEEEeCCChHHHHHHHH---HcCCce--
Confidence 3456789999999999998210 011 1233334578888 78899999999999887777763 222210
Q ss_pred cEEEEECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCC
Q 003042 653 GYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANE 732 (854)
Q Consensus 653 G~~I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~ 732 (854)
++
T Consensus 95 -~~----------------------------------------------------------------------------- 96 (188)
T 2r8e_A 95 -LY----------------------------------------------------------------------------- 96 (188)
T ss_dssp -EE-----------------------------------------------------------------------------
T ss_pred -ee-----------------------------------------------------------------------------
Confidence 00
Q ss_pred CEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC
Q 003042 733 PVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK 812 (854)
Q Consensus 733 ~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~ 812 (854)
+.+.+|+.+++.+++++ |++++++++|||+.||++|++.+|. ++.+++.
T Consensus 97 --------------~~~kpk~~~~~~~~~~~---g~~~~~~~~iGD~~~Di~~a~~ag~--------------~~~~~~~ 145 (188)
T 2r8e_A 97 --------------QGQSNKLIAFSDLLEKL---AIAPENVAYVGDDLIDWPVMEKVGL--------------SVAVADA 145 (188)
T ss_dssp --------------CSCSCSHHHHHHHHHHH---TCCGGGEEEEESSGGGHHHHTTSSE--------------EEECTTS
T ss_pred --------------cCCCCCHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCC--------------EEEecCc
Confidence 01345999999999999 9999999999999999999999986 4556543
Q ss_pred ----CcccceEeCCH--hHHH-HHHHHHHhcc
Q 003042 813 ----PSMAKYYLDDT--AEVI-NLLEGLATES 837 (854)
Q Consensus 813 ----~s~A~y~l~~~--~eV~-~~L~~l~~~~ 837 (854)
+..|+|+++++ .+++ ++++.+....
T Consensus 146 ~~~~~~~ad~v~~~~~~~g~~~~~l~~ll~~~ 177 (188)
T 2r8e_A 146 HPLLIPRADYVTRIAGGRGAVREVCDLLLLAQ 177 (188)
T ss_dssp CTTTGGGSSEECSSCTTTTHHHHHHHHHHHHT
T ss_pred CHHHHhcCCEEEeCCCCCcHHHHHHHHHHHhc
Confidence 35789999874 3444 7777776654
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.8e-11 Score=126.38 Aligned_cols=73 Identities=16% Similarity=0.229 Sum_probs=63.8
Q ss_pred eeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC------cccceE
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP------SMAKYY 819 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~------s~A~y~ 819 (854)
.+.+..|+.+++.+++++ |++++++++|||+.||++|++.+|.. +++|++|... ..|+|+
T Consensus 156 ~~~~kp~~~~~~~~~~~l---g~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~ad~v 221 (237)
T 4ex6_A 156 VERGKPHPDMALHVARGL---GIPPERCVVIGDGVPDAEMGRAAGMT-----------VIGVSYGVSGPDELMRAGADTV 221 (237)
T ss_dssp SSSCTTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEESSSSSCHHHHHHTTCSEE
T ss_pred CCCCCCCHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCCe-----------EEEEecCCCCHHHHHhcCCCEE
Confidence 456778999999999999 99999999999999999999999983 5678888532 479999
Q ss_pred eCCHhHHHHHHHH
Q 003042 820 LDDTAEVINLLEG 832 (854)
Q Consensus 820 l~~~~eV~~~L~~ 832 (854)
+++..++.++|+.
T Consensus 222 ~~~~~el~~~l~~ 234 (237)
T 4ex6_A 222 VDSFPAAVTAVLD 234 (237)
T ss_dssp ESSHHHHHHHHHH
T ss_pred ECCHHHHHHHHHc
Confidence 9999999998864
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.11 E-value=9.7e-11 Score=117.80 Aligned_cols=56 Identities=18% Similarity=0.205 Sum_probs=49.1
Q ss_pred cchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeCC
Q 003042 750 VSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDD 822 (854)
Q Consensus 750 vsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~ 822 (854)
.+|+.+++.+++.+ |++++++++|||+.||++|++.+|. ++++|+. +..|+|++.+
T Consensus 93 ~~K~~~~~~~~~~~---g~~~~~~~~vGD~~nDi~~~~~ag~--------------~~~~~~~~~~~~~~ad~v~~~ 152 (189)
T 3mn1_A 93 EDKLVVLDKLLAEL---QLGYEQVAYLGDDLPDLPVIRRVGL--------------GMAVANAASFVREHAHGITRA 152 (189)
T ss_dssp SCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHHHHHTSSEECSS
T ss_pred CChHHHHHHHHHHc---CCChhHEEEECCCHHHHHHHHHCCC--------------eEEeCCccHHHHHhCCEEecC
Confidence 56999999999999 9999999999999999999999985 5777764 3578999876
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.11 E-value=1.8e-10 Score=114.10 Aligned_cols=67 Identities=15% Similarity=0.062 Sum_probs=57.1
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC--------CcccceEeCCH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK--------PSMAKYYLDDT 823 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~--------~s~A~y~l~~~ 823 (854)
+...++.+++++ |++++++++|||+.||+.|.+.+|.. ++.|.+|.. ...|+|++++.
T Consensus 103 ~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~d~v~~~l 168 (179)
T 3l8h_A 103 LPGMYRDIARRY---DVDLAGVPAVGDSLRDLQAAAQAGCA-----------PWLVQTGNGRKTLAQGGLPEGTRVCEDL 168 (179)
T ss_dssp SSHHHHHHHHHH---TCCCTTCEEEESSHHHHHHHHHHTCE-----------EEEESTTTHHHHHHHCCCCTTEEEESSH
T ss_pred CHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCc-----------EEEECCCCcchhhhhcccCCCcEEecCH
Confidence 566789999999 99999999999999999999999973 467777753 25689999999
Q ss_pred hHHHHHHHH
Q 003042 824 AEVINLLEG 832 (854)
Q Consensus 824 ~eV~~~L~~ 832 (854)
.|+.++|..
T Consensus 169 ~el~~~l~~ 177 (179)
T 3l8h_A 169 AAVAEQLLQ 177 (179)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999988754
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=4.4e-11 Score=116.97 Aligned_cols=68 Identities=19% Similarity=0.308 Sum_probs=54.9
Q ss_pred cchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeCCH--
Q 003042 750 VSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDDT-- 823 (854)
Q Consensus 750 vsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~~-- 823 (854)
..|+.+++.+++++ |++++++++|||+.||++|++.+|. ++.+++. +..|+|++.+.
T Consensus 78 kpk~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~~~~ag~--------------~~~~~~~~~~~~~~ad~v~~~~~~ 140 (164)
T 3e8m_A 78 VDKLSAAEELCNEL---GINLEQVAYIGDDLNDAKLLKRVGI--------------AGVPASAPFYIRRLSTIFLEKRGG 140 (164)
T ss_dssp SCHHHHHHHHHHHH---TCCGGGEEEECCSGGGHHHHTTSSE--------------EECCTTSCHHHHTTCSSCCCCCTT
T ss_pred CChHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCC--------------eEEcCChHHHHHHhCcEEeccCCC
Confidence 34999999999999 9999999999999999999999985 4555553 46789988753
Q ss_pred hH-HHHHHHHHH
Q 003042 824 AE-VINLLEGLA 834 (854)
Q Consensus 824 ~e-V~~~L~~l~ 834 (854)
++ +.++++.+.
T Consensus 141 ~g~~~e~~~~ll 152 (164)
T 3e8m_A 141 EGVFREFVEKVL 152 (164)
T ss_dssp TTHHHHHHHHHT
T ss_pred CcHHHHHHHHHH
Confidence 33 667777665
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.09 E-value=6.9e-11 Score=121.36 Aligned_cols=73 Identities=12% Similarity=0.164 Sum_probs=62.3
Q ss_pred CcchHHHHHHHHHHHhhCCCCCCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC----cccceEeCCH
Q 003042 749 GVSKGIVVKNLISTMRSRGKSPDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFACTVGQKP----SMAKYYLDDT 823 (854)
Q Consensus 749 gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~----s~A~y~l~~~ 823 (854)
+..|+.+++.+++++ |++++++++|||+. ||+.|++.+|.. ++.|.+|+.. ..|+|++++.
T Consensus 154 ~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~~aG~~-----------~~~v~~~~~~~~~~~~a~~~~~~~ 219 (234)
T 3u26_A 154 FKPHPRIFELALKKA---GVKGEEAVYVGDNPVKDCGGSKNLGMT-----------SILLDRKGEKREFWDKCDFIVSDL 219 (234)
T ss_dssp CTTSHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHTTTCE-----------EEEECSSSTTGGGGGGCSEEESST
T ss_pred CCcCHHHHHHHHHHc---CCCchhEEEEcCCcHHHHHHHHHcCCE-----------EEEECCCCCccccccCCCEeeCCH
Confidence 445788899999999 99999999999997 999999999973 4677777643 3899999999
Q ss_pred hHHHHHHHHHHh
Q 003042 824 AEVINLLEGLAT 835 (854)
Q Consensus 824 ~eV~~~L~~l~~ 835 (854)
.++.++|+.+..
T Consensus 220 ~el~~~l~~~~~ 231 (234)
T 3u26_A 220 REVIKIVDELNG 231 (234)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHHhh
Confidence 999999988743
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.09 E-value=8.5e-11 Score=118.47 Aligned_cols=56 Identities=23% Similarity=0.323 Sum_probs=48.7
Q ss_pred cchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeCC
Q 003042 750 VSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDD 822 (854)
Q Consensus 750 vsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~ 822 (854)
.+|+.+++.+++.+ |++++++++|||+.||++|++.+|. ++++++. +..|+|++.+
T Consensus 93 kpk~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~~~~ag~--------------~~~~~~~~~~~~~~ad~v~~~ 152 (191)
T 3n1u_A 93 VDKRSAYQHLKKTL---GLNDDEFAYIGDDLPDLPLIQQVGL--------------GVAVSNAVPQVLEFADWRTER 152 (191)
T ss_dssp SSCHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTCCHHHHHHSSEECSS
T ss_pred CChHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHHCCC--------------EEEeCCccHHHHHhCCEEecC
Confidence 35999999999999 9999999999999999999999985 4667764 3678999976
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.09 E-value=3e-10 Score=116.55 Aligned_cols=71 Identities=20% Similarity=0.247 Sum_probs=59.8
Q ss_pred chHHHHHHHHHHHhhCC--CCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC------cccceEeCC
Q 003042 751 SKGIVVKNLISTMRSRG--KSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP------SMAKYYLDD 822 (854)
Q Consensus 751 sKg~al~~ll~~l~~~g--i~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~------s~A~y~l~~ 822 (854)
.+..+++.+++++ | ++++++++|||+.||++|++.+|.. +++|.+|... ..|+|++++
T Consensus 152 ~~~~~~~~~~~~l---g~~~~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~~~~~~a~~v~~~ 217 (234)
T 2hcf_A 152 LPHIALERARRMT---GANYSPSQIVIIGDTEHDIRCARELDAR-----------SIAVATGNFTMEELARHKPGTLFKN 217 (234)
T ss_dssp HHHHHHHHHHHHH---CCCCCGGGEEEEESSHHHHHHHHTTTCE-----------EEEECCSSSCHHHHHTTCCSEEESC
T ss_pred hHHHHHHHHHHHh---CCCCCcccEEEECCCHHHHHHHHHCCCc-----------EEEEcCCCCCHHHHHhCCCCEEeCC
Confidence 4567889999999 9 8999999999999999999999973 4677777532 248999999
Q ss_pred HhHHHHHHHHHHh
Q 003042 823 TAEVINLLEGLAT 835 (854)
Q Consensus 823 ~~eV~~~L~~l~~ 835 (854)
..++.++|+.+..
T Consensus 218 ~~el~~~l~~~~~ 230 (234)
T 2hcf_A 218 FAETDEVLASILT 230 (234)
T ss_dssp SCCHHHHHHHHHC
T ss_pred HHhHHHHHHHHhc
Confidence 9999999988764
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.08 E-value=9.8e-11 Score=118.40 Aligned_cols=68 Identities=16% Similarity=0.162 Sum_probs=54.3
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeCCH--h
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDDT--A 824 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~~--~ 824 (854)
+|+.+++.+++.+ |++++++++|||+.||++|++.+|. +|++|+. +..|+|++.+. +
T Consensus 100 ~k~~~~~~~~~~~---~~~~~~~~~vGD~~nDi~~~~~ag~--------------~va~~na~~~~~~~ad~v~~~~~~~ 162 (195)
T 3n07_A 100 DKVQAYYDICQKL---AIAPEQTGYIGDDLIDWPVMEKVAL--------------RVCVADGHPLLAQRANYVTHIKGGH 162 (195)
T ss_dssp SHHHHHHHHHHHH---CCCGGGEEEEESSGGGHHHHTTSSE--------------EEECTTSCHHHHHHCSEECSSCTTT
T ss_pred CcHHHHHHHHHHh---CCCHHHEEEEcCCHHHHHHHHHCCC--------------EEEECChHHHHHHhCCEEEcCCCCC
Confidence 5999999999999 9999999999999999999999985 6777765 36789998653 3
Q ss_pred HH-HHHHHHHHh
Q 003042 825 EV-INLLEGLAT 835 (854)
Q Consensus 825 eV-~~~L~~l~~ 835 (854)
++ ..+++.+.+
T Consensus 163 G~~~~~~~~il~ 174 (195)
T 3n07_A 163 GAVREVCDLILQ 174 (195)
T ss_dssp THHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 43 344444444
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.08 E-value=8.1e-12 Score=131.67 Aligned_cols=76 Identities=16% Similarity=0.233 Sum_probs=65.1
Q ss_pred eeCCcchHHHHHHHHHHHhhCCCCC-CeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------------
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGKSP-DFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------------ 812 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi~~-d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------------ 812 (854)
.+.+.+|+.+++.+++++ |+++ +++++|||+.||++|++.+|.. +++|++|+.
T Consensus 156 ~~~~kp~~~~~~~~~~~l---gi~~~~~~i~iGD~~nDi~~a~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~ 221 (267)
T 1swv_A 156 VPAGRPYPWMCYKNAMEL---GVYPMNHMIKVGDTVSDMKEGRNAGMW-----------TVGVILGSSELGLTEEEVENM 221 (267)
T ss_dssp SSCCTTSSHHHHHHHHHH---TCCSGGGEEEEESSHHHHHHHHHTTSE-----------EEEECTTCTTTCCCHHHHHHS
T ss_pred cCCCCCCHHHHHHHHHHh---CCCCCcCEEEEeCCHHHHHHHHHCCCE-----------EEEEcCCCCccCccHHHHhhc
Confidence 466788999999999999 9999 9999999999999999999973 467777764
Q ss_pred -----------------CcccceEeCCHhHHHHHHHHHHh
Q 003042 813 -----------------PSMAKYYLDDTAEVINLLEGLAT 835 (854)
Q Consensus 813 -----------------~s~A~y~l~~~~eV~~~L~~l~~ 835 (854)
...|+|++++..++.++|..+.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~~~~ 261 (267)
T 1swv_A 222 DSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHIEK 261 (267)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHHHTC
T ss_pred hhhhhhhhhhhHHHHHHhcCCceeccCHHHHHHHHHHHhh
Confidence 13599999999999999877643
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=9.3e-11 Score=118.20 Aligned_cols=65 Identities=17% Similarity=0.298 Sum_probs=54.4
Q ss_pred CCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC---CcccceEeCC--
Q 003042 748 QGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK---PSMAKYYLDD-- 822 (854)
Q Consensus 748 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~---~s~A~y~l~~-- 822 (854)
.+.+|+.++..+++++ |++++++++|||+.||++|++.+|. +|.++.. +..|+|++++
T Consensus 140 ~~~~K~~~l~~~~~~l---gi~~~~~~~iGD~~~Di~~~~~ag~--------------~~~~~~~~~~~~~a~~v~~~~~ 202 (211)
T 1l7m_A 140 KENAKGEILEKIAKIE---GINLEDTVAVGDGANDISMFKKAGL--------------KIAFCAKPILKEKADICIEKRD 202 (211)
T ss_dssp STTHHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHCSE--------------EEEESCCHHHHTTCSEEECSSC
T ss_pred CCccHHHHHHHHHHHc---CCCHHHEEEEecChhHHHHHHHCCC--------------EEEECCCHHHHhhcceeecchh
Confidence 4789999999999999 9999999999999999999999986 4556632 3578999987
Q ss_pred HhHHHHH
Q 003042 823 TAEVINL 829 (854)
Q Consensus 823 ~~eV~~~ 829 (854)
..++..+
T Consensus 203 ~~~l~~~ 209 (211)
T 1l7m_A 203 LREILKY 209 (211)
T ss_dssp GGGGGGG
T ss_pred HHHHHHh
Confidence 7776543
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.5e-11 Score=125.06 Aligned_cols=76 Identities=16% Similarity=0.123 Sum_probs=54.1
Q ss_pred eCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecC-C----C-cccceEe
Q 003042 747 PQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ-K----P-SMAKYYL 820 (854)
Q Consensus 747 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~-~----~-s~A~y~l 820 (854)
+.+..|+.+++.+++++ |++++++++|||+.||++|++.+|.. ++.|..|. . + ..|+|++
T Consensus 142 ~~~k~~~~~~~~~~~~~---~~~~~~~i~iGD~~nDi~~~~~aG~~-----------~~~~~~~~~~~~~l~~~~ad~v~ 207 (225)
T 3d6j_A 142 THHKPDPEGLLLAIDRL---KACPEEVLYIGDSTVDAGTAAAAGVS-----------FTGVTSGMTTAQEFQAYPYDRII 207 (225)
T ss_dssp SSCTTSTHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEETTSSCCTTGGGGSCCSEEE
T ss_pred CCCCCChHHHHHHHHHh---CCChHHeEEEcCCHHHHHHHHHCCCe-----------EEEECCCCCChHHHhhcCCCEEE
Confidence 44566789999999999 99999999999999999999999973 23444432 1 1 2389999
Q ss_pred CCHhHHHHHHHHHHhc
Q 003042 821 DDTAEVINLLEGLATE 836 (854)
Q Consensus 821 ~~~~eV~~~L~~l~~~ 836 (854)
++.+++.++|+.+.+.
T Consensus 208 ~~~~el~~~l~~~~~~ 223 (225)
T 3d6j_A 208 STLGQLISVPEDKSGC 223 (225)
T ss_dssp SSGGGGC---------
T ss_pred CCHHHHHHhhhhhcCC
Confidence 9999999999877653
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.05 E-value=2.5e-10 Score=118.23 Aligned_cols=77 Identities=13% Similarity=0.025 Sum_probs=66.3
Q ss_pred eCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC------cccceEe
Q 003042 747 PQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP------SMAKYYL 820 (854)
Q Consensus 747 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~------s~A~y~l 820 (854)
+.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|..|... ..|+|++
T Consensus 162 ~~~kp~~~~~~~~~~~l---g~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~l~~~~ad~v~ 227 (247)
T 3dv9_A 162 KYGKPNPEPYLMALKKG---GFKPNEALVIENAPLGVQAGVAAGIF-----------TIAVNTGPLHDNVLLNEGANLLF 227 (247)
T ss_dssp SSCTTSSHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHHHTTSE-----------EEEECCSSSCHHHHHTTTCSEEE
T ss_pred CCCCCCCHHHHHHHHHc---CCChhheEEEeCCHHHHHHHHHCCCe-----------EEEEcCCCCCHHHHHhcCCCEEE
Confidence 56777899999999999 99999999999999999999999973 4566666532 3799999
Q ss_pred CCHhHHHHHHHHHHhcc
Q 003042 821 DDTAEVINLLEGLATES 837 (854)
Q Consensus 821 ~~~~eV~~~L~~l~~~~ 837 (854)
++..++.++|+.+....
T Consensus 228 ~~~~el~~~l~~~~~~~ 244 (247)
T 3dv9_A 228 HSMPDFNKNWETLQSAL 244 (247)
T ss_dssp SSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 99999999999987754
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.03 E-value=8.3e-10 Score=113.00 Aligned_cols=71 Identities=20% Similarity=0.229 Sum_probs=56.2
Q ss_pred cchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeCCH--
Q 003042 750 VSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDDT-- 823 (854)
Q Consensus 750 vsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~~-- 823 (854)
.+|+.+++.+++.+ |++++++++|||+.||++|++.+|. +|++++. +..|+|++.++
T Consensus 123 k~K~~~l~~~~~~l---g~~~~~~~~vGDs~nDi~~~~~ag~--------------~~a~~~~~~~~~~~Ad~v~~~~~~ 185 (211)
T 3ij5_A 123 SDKLVAYHELLATL---QCQPEQVAYIGDDLIDWPVMAQVGL--------------SVAVADAHPLLLPKAHYVTRIKGG 185 (211)
T ss_dssp SSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHTTSSE--------------EEECTTSCTTTGGGSSEECSSCTT
T ss_pred CChHHHHHHHHHHc---CcCcceEEEEcCCHHHHHHHHHCCC--------------EEEeCCccHHHHhhCCEEEeCCCC
Confidence 35999999999999 9999999999999999999999985 5667653 46799998764
Q ss_pred h-HHHHHHHHHHhcc
Q 003042 824 A-EVINLLEGLATES 837 (854)
Q Consensus 824 ~-eV~~~L~~l~~~~ 837 (854)
+ .|.++++.+....
T Consensus 186 ~G~v~e~~~~ll~~~ 200 (211)
T 3ij5_A 186 RGAVREVCDLILLAQ 200 (211)
T ss_dssp TTHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHc
Confidence 2 2556666655543
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.03 E-value=2.3e-10 Score=118.83 Aligned_cols=74 Identities=9% Similarity=0.015 Sum_probs=62.9
Q ss_pred eCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC------cccceEe
Q 003042 747 PQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP------SMAKYYL 820 (854)
Q Consensus 747 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~------s~A~y~l 820 (854)
..+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|..|... ..|+|++
T Consensus 163 ~~~kp~~~~~~~~~~~l---g~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~l~~~~ad~v~ 228 (243)
T 3qxg_A 163 KYGKPNPEPYLMALKKG---GLKADEAVVIENAPLGVEAGHKAGIF-----------TIAVNTGPLDGQVLLDAGADLLF 228 (243)
T ss_dssp SSCTTSSHHHHHHHHHT---TCCGGGEEEEECSHHHHHHHHHTTCE-----------EEEECCSSSCHHHHHHTTCSEEE
T ss_pred CCCCCChHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHCCCE-----------EEEEeCCCCCHHHHHhcCCCEEE
Confidence 55677899999999999 99999999999999999999999973 3556656432 3699999
Q ss_pred CCHhHHHHHHHHHH
Q 003042 821 DDTAEVINLLEGLA 834 (854)
Q Consensus 821 ~~~~eV~~~L~~l~ 834 (854)
++..++.++|+.|.
T Consensus 229 ~s~~el~~~l~~li 242 (243)
T 3qxg_A 229 PSMQTLCDSWDTIM 242 (243)
T ss_dssp SCHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhhh
Confidence 99999999998873
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=3.2e-10 Score=115.93 Aligned_cols=70 Identities=10% Similarity=0.078 Sum_probs=57.5
Q ss_pred CcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccE-EEEEecCCC-----cccceEeCC
Q 003042 749 GVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEV-FACTVGQKP-----SMAKYYLDD 822 (854)
Q Consensus 749 gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~-~aV~vG~~~-----s~A~y~l~~ 822 (854)
+-.|..+++.+++.+ |++++++++|||+.||+.|.+.+|.. + +.|.+|... ..|+|++++
T Consensus 130 ~KP~p~~~~~~~~~l---gi~~~~~~~VGD~~~Di~~a~~aG~~-----------~~i~v~~g~~~~~~~~~~~d~vi~~ 195 (211)
T 2gmw_A 130 RKPHPGMLLSARDYL---HIDMAASYMVGDKLEDMQAAVAANVG-----------TKVLVRTGKPITPEAENAADWVLNS 195 (211)
T ss_dssp STTSCHHHHHHHHHH---TBCGGGCEEEESSHHHHHHHHHTTCS-----------EEEEESSSSCCCHHHHHHCSEEESC
T ss_pred CCCCHHHHHHHHHHc---CCCHHHEEEEcCCHHHHHHHHHCCCc-----------eEEEEecCCCccccccCCCCEEeCC
Confidence 334677899999999 99999999999999999999999973 4 567667532 358999999
Q ss_pred HhHHHHHHHH
Q 003042 823 TAEVINLLEG 832 (854)
Q Consensus 823 ~~eV~~~L~~ 832 (854)
..++.++|..
T Consensus 196 l~el~~~l~~ 205 (211)
T 2gmw_A 196 LADLPQAIKK 205 (211)
T ss_dssp GGGHHHHHHC
T ss_pred HHHHHHHHHh
Confidence 9999887754
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.02 E-value=5.5e-10 Score=117.74 Aligned_cols=76 Identities=8% Similarity=0.034 Sum_probs=66.2
Q ss_pred eeCCcchHHHHHHHHHHHhhCCCCC-CeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------------
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGKSP-DFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------------ 812 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi~~-d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------------ 812 (854)
.+.+..|+.+++.+++++ |+++ +++++|||+.||+.|++.+|.. ++.|++|..
T Consensus 164 ~~~~kp~~~~~~~~~~~l---gi~~~~~~i~vGD~~~Di~~a~~aG~~-----------~v~v~~g~~~~~~~~~~~~~~ 229 (277)
T 3iru_A 164 VVRGRPFPDMALKVALEL---EVGHVNGCIKVDDTLPGIEEGLRAGMW-----------TVGVSCSGNEVGLDREDWQAL 229 (277)
T ss_dssp SSSCTTSSHHHHHHHHHH---TCSCGGGEEEEESSHHHHHHHHHTTCE-----------EEEECSSSTTTCCCHHHHHHS
T ss_pred cCCCCCCHHHHHHHHHHc---CCCCCccEEEEcCCHHHHHHHHHCCCe-----------EEEEecCCcccccchhhhhhc
Confidence 566788999999999999 9999 9999999999999999999973 578888832
Q ss_pred -----------------CcccceEeCCHhHHHHHHHHHHh
Q 003042 813 -----------------PSMAKYYLDDTAEVINLLEGLAT 835 (854)
Q Consensus 813 -----------------~s~A~y~l~~~~eV~~~L~~l~~ 835 (854)
...|+|++++..++.++|..+..
T Consensus 230 ~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~ 269 (277)
T 3iru_A 230 SSDEQQSYRQHAEQRLFNAGAHYVIDSVADLETVITDVNR 269 (277)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSEEESSGGGTHHHHHHHHH
T ss_pred chhhhhhhhhhhHHHHhhCCCCEEecCHHHHHHHHHHHHH
Confidence 24599999999999999988765
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.01 E-value=3.6e-10 Score=114.31 Aligned_cols=76 Identities=18% Similarity=0.202 Sum_probs=61.1
Q ss_pred CeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------C
Q 003042 740 QHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------P 813 (854)
Q Consensus 740 ~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------~ 813 (854)
....++.+.+.+|+..++.+.+.+ |++++++++|||+.||++|++ +|.. .++|.+|.. +
T Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~vGD~~~Di~~~~-~G~~-----------~~~v~~~~~~~~~~~~ 201 (219)
T 3kd3_A 137 GSFKELDNSNGACDSKLSAFDKAK---GLIDGEVIAIGDGYTDYQLYE-KGYA-----------TKFIAYMEHIEREKVI 201 (219)
T ss_dssp SBEEEEECTTSTTTCHHHHHHHHG---GGCCSEEEEEESSHHHHHHHH-HTSC-----------SEEEEECSSCCCHHHH
T ss_pred CceeccCCCCCCcccHHHHHHHHh---CCCCCCEEEEECCHhHHHHHh-CCCC-----------cEEEeccCccccHHHH
Confidence 445677888999999999999998 999999999999999999995 5652 245555532 3
Q ss_pred cccceEeCCHhHHHHHH
Q 003042 814 SMAKYYLDDTAEVINLL 830 (854)
Q Consensus 814 s~A~y~l~~~~eV~~~L 830 (854)
..|+|++++.+++.++|
T Consensus 202 ~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 202 NLSKYVARNVAELASLI 218 (219)
T ss_dssp HHCSEEESSHHHHHHHH
T ss_pred hhcceeeCCHHHHHHhh
Confidence 57999999999988775
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.6e-11 Score=125.86 Aligned_cols=73 Identities=8% Similarity=0.044 Sum_probs=60.7
Q ss_pred eCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeC
Q 003042 747 PQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLD 821 (854)
Q Consensus 747 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~ 821 (854)
+.+..|+.+++.+++++ |++++++++|||+. ||+.|++.+|.. ++.|..|.. ...|+|+++
T Consensus 152 ~~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~~aG~~-----------~~~v~~~~~~~~~~~~~~~~~~ 217 (230)
T 3vay_A 152 GIGKPDPAPFLEALRRA---KVDASAAVHVGDHPSDDIAGAQQAGMR-----------AIWYNPQGKAWDADRLPDAEIH 217 (230)
T ss_dssp TCCTTSHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEECTTCCCCCSSSCCSEEES
T ss_pred CCCCcCHHHHHHHHHHh---CCCchheEEEeCChHHHHHHHHHCCCE-----------EEEEcCCCCCCcccCCCCeeEC
Confidence 34556799999999999 99999999999997 999999999973 345555543 457899999
Q ss_pred CHhHHHHHHHHH
Q 003042 822 DTAEVINLLEGL 833 (854)
Q Consensus 822 ~~~eV~~~L~~l 833 (854)
+..++.++|++.
T Consensus 218 ~l~el~~~l~~~ 229 (230)
T 3vay_A 218 NLSQLPEVLARW 229 (230)
T ss_dssp SGGGHHHHHHTT
T ss_pred CHHHHHHHHHhh
Confidence 999999998754
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=3e-10 Score=114.74 Aligned_cols=68 Identities=21% Similarity=0.221 Sum_probs=58.2
Q ss_pred CcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeCCHh
Q 003042 749 GVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDDTA 824 (854)
Q Consensus 749 gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~~~ 824 (854)
+..|+.+++.+++++ |++++++++|||+.||++|++.+|.. +|.+++. +..|+|++++.+
T Consensus 126 ~kp~~~~~~~~~~~~---g~~~~~~i~iGD~~~Di~~a~~aG~~-------------~i~v~~~~~~~~~~ad~v~~~~~ 189 (205)
T 3m9l_A 126 PKPHPGGLLKLAEAW---DVSPSRMVMVGDYRFDLDCGRAAGTR-------------TVLVNLPDNPWPELTDWHARDCA 189 (205)
T ss_dssp CTTSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-------------EEECSSSSCSCGGGCSEECSSHH
T ss_pred CCCCHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcCCE-------------EEEEeCCCCcccccCCEEeCCHH
Confidence 445788999999999 99999999999999999999999972 5666643 456999999999
Q ss_pred HHHHHHHH
Q 003042 825 EVINLLEG 832 (854)
Q Consensus 825 eV~~~L~~ 832 (854)
|+...|+.
T Consensus 190 el~~~~~~ 197 (205)
T 3m9l_A 190 QLRDLLSA 197 (205)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99888875
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=98.99 E-value=2.9e-09 Score=112.25 Aligned_cols=208 Identities=12% Similarity=0.126 Sum_probs=113.0
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcc-cceeecCcEEEEECCCc
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEK-LGLSAEHGYFTRWSKNS 662 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~-l~liaenG~~I~~~~~~ 662 (854)
++|+|+||+||||++ ....+ +.+.++|+.+ ++.|..++++|||+......+...+.. +++......++..++..
T Consensus 4 ~~k~v~fDlDGTL~~---~~~~~-~~~~~~l~~l-~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 78 (264)
T 1yv9_A 4 DYQGYLIDLDGTIYL---GKEPI-PAGKRFVERL-QEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYTATLAT 78 (264)
T ss_dssp SCCEEEECCBTTTEE---TTEEC-HHHHHHHHHH-HHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCCGGGEEEHHHHH
T ss_pred cCCEEEEeCCCeEEe---CCEEC-cCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCChhhEEcHHHHH
Confidence 579999999999999 55555 7888999998 789999999999998887776643222 33321111111111000
Q ss_pred c--eE------EccccccchHHHHHHHHHHHHhccCCcceEeccc-ceEEEeeccCCCccchhhHHHHHHHHHHHhcCCC
Q 003042 663 A--WE------ICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKE-TAIVWHHQHADPHFGSCQAKELLDHLENVLANEP 733 (854)
Q Consensus 663 ~--~~------~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~-~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~ 733 (854)
. +. .........+. ..+..+ |....... ..+...+.. ......+.++++.+. ....
T Consensus 79 ~~~~~~~~~~~~~~~~g~~~l~----~~l~~~-----g~~~~~~~~~~v~~~~~~---~~~~~~~~~~l~~l~---~g~~ 143 (264)
T 1yv9_A 79 IDYMKEANRGKKVFVIGEAGLI----DLILEA-----GFEWDETNPDYVVVGLDT---ELSYEKVVLATLAIQ---KGAL 143 (264)
T ss_dssp HHHHHHHCCCSEEEEESCHHHH----HHHHHT-----TCEECSSSCSEEEECCCT---TCCHHHHHHHHHHHH---TTCE
T ss_pred HHHHHhhCCCCEEEEEeCHHHH----HHHHHc-----CCcccCCCCCEEEEECCC---CcCHHHHHHHHHHHh---CCCE
Confidence 0 00 00000000111 111111 11111101 111111111 111223444555543 2222
Q ss_pred EEEEEc-CeEE----EEe-----------------eCCcchH--HHHHHHHHHHhhCCCCCCeEEEEeCC-cccHHHHHH
Q 003042 734 VVVKRG-QHIV----EVK-----------------PQGVSKG--IVVKNLISTMRSRGKSPDFVLCIGDD-RSDEDMFES 788 (854)
Q Consensus 734 ~~v~~g-~~~v----EI~-----------------p~gvsKg--~al~~ll~~l~~~gi~~d~vlaiGDs-~ND~~Mf~~ 788 (854)
. +.++ .... .+. +.+..|. .+++.+++.+ |++++++++|||+ .||+.|.+.
T Consensus 144 ~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~~ 219 (264)
T 1yv9_A 144 F-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHL---GVEKEQVIMVGDNYETDIQSGIQ 219 (264)
T ss_dssp E-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHH---CSCGGGEEEEESCTTTHHHHHHH
T ss_pred E-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHc---CCCHHHEEEECCCcHHHHHHHHH
Confidence 2 2222 1111 001 1123465 5899999999 9999999999999 699999999
Q ss_pred hhhhcCCCCCCCCccEEEEEecCCC--------cccceEeCCHhHH
Q 003042 789 IEQAVADPSVPGIAEVFACTVGQKP--------SMAKYYLDDTAEV 826 (854)
Q Consensus 789 ag~~~~~~~~~~~~~~~aV~vG~~~--------s~A~y~l~~~~eV 826 (854)
+|.. ++.|.+|... ..|+|++++..++
T Consensus 220 aG~~-----------~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el 254 (264)
T 1yv9_A 220 NGID-----------SLLVTSGFTPKSAVPTLPTPPTYVVDSLDEW 254 (264)
T ss_dssp HTCE-----------EEEETTSSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred cCCc-----------EEEECCCCCCHHHHHhcCCCCCEEEecHHHH
Confidence 9973 4566666531 1689999887664
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=4.4e-10 Score=116.42 Aligned_cols=72 Identities=11% Similarity=0.015 Sum_probs=58.4
Q ss_pred CcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----Cccc-ceEeCCH
Q 003042 749 GVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMA-KYYLDDT 823 (854)
Q Consensus 749 gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A-~y~l~~~ 823 (854)
+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|..|.. ...| ++++++.
T Consensus 160 ~Kp~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~v~~~~~~~~~~~~~~~~~~~~~ 225 (240)
T 2no4_A 160 YKPDPRIYQFACDRL---GVNPNEVCFVSSNAWDLGGAGKFGFN-----------TVRINRQGNPPEYEFAPLKHQVNSL 225 (240)
T ss_dssp CTTSHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHHTCE-----------EEEECTTCCCCCCTTSCCSEEESSG
T ss_pred CCCCHHHHHHHHHHc---CCCcccEEEEeCCHHHHHHHHHCCCE-----------EEEECCCCCCCcccCCCCceeeCCH
Confidence 334788999999999 99999999999999999999999974 456666643 2457 9999999
Q ss_pred hHHHHHHHHHH
Q 003042 824 AEVINLLEGLA 834 (854)
Q Consensus 824 ~eV~~~L~~l~ 834 (854)
.++.++|..+.
T Consensus 226 ~el~~~l~~~~ 236 (240)
T 2no4_A 226 SELWPLLAKNV 236 (240)
T ss_dssp GGHHHHHCC--
T ss_pred HHHHHHHHHhh
Confidence 99998886654
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.3e-10 Score=121.12 Aligned_cols=74 Identities=9% Similarity=-0.007 Sum_probs=62.1
Q ss_pred EEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEE----ecC-------C
Q 003042 744 EVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACT----VGQ-------K 812 (854)
Q Consensus 744 EI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~----vG~-------~ 812 (854)
|..+.+..|+.+++.+++++ |++++++++|||+.||++|++.+|.. ++.+. +|. .
T Consensus 167 ~~~~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~~~~~~~~g~~~~~~l~~ 232 (254)
T 3umc_A 167 DLFGHYKPDPQVYLGACRLL---DLPPQEVMLCAAHNYDLKAARALGLK-----------TAFIARPLEYGPGQSQDLAA 232 (254)
T ss_dssp HHHTCCTTSHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHTTCE-----------EEEECCTTTTCTTCCSSSSC
T ss_pred cccccCCCCHHHHHHHHHHc---CCChHHEEEEcCchHhHHHHHHCCCe-----------EEEEecCCccCCCCCccccc
Confidence 45567888999999999999 99999999999999999999999974 33444 343 1
Q ss_pred CcccceEeCCHhHHHHHHH
Q 003042 813 PSMAKYYLDDTAEVINLLE 831 (854)
Q Consensus 813 ~s~A~y~l~~~~eV~~~L~ 831 (854)
+..|+|++++..++.++|.
T Consensus 233 ~~~ad~v~~~l~el~~~l~ 251 (254)
T 3umc_A 233 EQDWDLIASDLLDLHRQLA 251 (254)
T ss_dssp SSCCSEEESSHHHHHHHHH
T ss_pred CCCCcEEECCHHHHHHHhc
Confidence 4578999999999998875
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.96 E-value=4.4e-10 Score=115.07 Aligned_cols=76 Identities=18% Similarity=0.139 Sum_probs=63.2
Q ss_pred eeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------CcccceE
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------PSMAKYY 819 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------~s~A~y~ 819 (854)
.+.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|++|.. ...|+|+
T Consensus 143 ~~~~kp~~~~~~~~~~~l---~~~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~l~~~~ad~v 208 (233)
T 3s6j_A 143 VSYGKPDPDLFLAAAKKI---GAPIDECLVIGDAIWDMLAARRCKAT-----------GVGLLSGGYDIGELERAGALRV 208 (233)
T ss_dssp SSCCTTSTHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEEGGGSCCHHHHHHTTCSEE
T ss_pred CCCCCCChHHHHHHHHHh---CCCHHHEEEEeCCHHhHHHHHHCCCE-----------EEEEeCCCCchHhHHhcCCCEE
Confidence 355677899999999999 99999999999999999999999973 467777732 2359999
Q ss_pred eCCHhHHHHHHHHHHh
Q 003042 820 LDDTAEVINLLEGLAT 835 (854)
Q Consensus 820 l~~~~eV~~~L~~l~~ 835 (854)
+++..++.++|+....
T Consensus 209 ~~~~~el~~~l~~~~~ 224 (233)
T 3s6j_A 209 YEDPLDLLNHLDEIAS 224 (233)
T ss_dssp ESSHHHHHHTGGGTCC
T ss_pred ECCHHHHHHHHHHHhh
Confidence 9999999888866544
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.95 E-value=3.7e-11 Score=123.21 Aligned_cols=71 Identities=11% Similarity=0.148 Sum_probs=58.4
Q ss_pred cchHHHHHHHHHHHhhCCCCCCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC----cccceEeCCHh
Q 003042 750 VSKGIVVKNLISTMRSRGKSPDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFACTVGQKP----SMAKYYLDDTA 824 (854)
Q Consensus 750 vsKg~al~~ll~~l~~~gi~~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~----s~A~y~l~~~~ 824 (854)
-.|+.+++.+++++ |++++++++|||+. ||++|++.+|.. ++.+..|+.+ ..|++++++..
T Consensus 158 kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~nDi~~a~~aG~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (235)
T 2om6_A 158 KPRKEMFEKVLNSF---EVKPEESLHIGDTYAEDYQGARKVGMW-----------AVWINQEGDKVRKLEERGFEIPSIA 223 (235)
T ss_dssp TTCHHHHHHHHHHT---TCCGGGEEEEESCTTTTHHHHHHTTSE-----------EEEECTTCCSCEEEETTEEEESSGG
T ss_pred CCCHHHHHHHHHHc---CCCccceEEECCChHHHHHHHHHCCCE-----------EEEECCCCCCcccCCCCcchHhhHH
Confidence 34789999999999 99999999999999 999999999984 3444445432 35789999999
Q ss_pred HHHHHHHHHH
Q 003042 825 EVINLLEGLA 834 (854)
Q Consensus 825 eV~~~L~~l~ 834 (854)
++..+|+.+.
T Consensus 224 el~~~l~~~~ 233 (235)
T 2om6_A 224 NLKDVIELIS 233 (235)
T ss_dssp GHHHHHHHTC
T ss_pred HHHHHHHHHh
Confidence 9999987764
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.94 E-value=3.1e-11 Score=123.54 Aligned_cols=76 Identities=14% Similarity=0.115 Sum_probs=62.1
Q ss_pred eeCC--cchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC---------c
Q 003042 746 KPQG--VSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP---------S 814 (854)
Q Consensus 746 ~p~g--vsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~---------s 814 (854)
.+.+ .+|+.+++.+++++ |++++++++|||+.||++|++.+|.. ++++..|... .
T Consensus 137 ~~~~~~kpk~~~~~~~~~~l---~~~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~~~~~~~~~~~~~~~l~~ 202 (229)
T 2fdr_A 137 LGADRVKPKPDIFLHGAAQF---GVSPDRVVVVEDSVHGIHGARAAGMR-----------VIGFTGASHTYPSHADRLTD 202 (229)
T ss_dssp HCTTCCTTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEECCSTTCCTTHHHHHHH
T ss_pred cccCCCCcCHHHHHHHHHHc---CCChhHeEEEcCCHHHHHHHHHCCCE-----------EEEEecCCccchhhhHHHhh
Confidence 4667 88999999999999 99999999999999999999999973 2344433321 1
Q ss_pred -ccceEeCCHhHHHHHHHHHHh
Q 003042 815 -MAKYYLDDTAEVINLLEGLAT 835 (854)
Q Consensus 815 -~A~y~l~~~~eV~~~L~~l~~ 835 (854)
.|+|++++..++.++|+.+..
T Consensus 203 ~~ad~v~~~~~el~~~l~~~~~ 224 (229)
T 2fdr_A 203 AGAETVISRMQDLPAVIAAMAE 224 (229)
T ss_dssp HTCSEEESCGGGHHHHHHHHTC
T ss_pred cCCceeecCHHHHHHHHHHhhh
Confidence 299999999999999988743
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.94 E-value=3.2e-10 Score=116.55 Aligned_cols=84 Identities=12% Similarity=0.049 Sum_probs=55.3
Q ss_pred eCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC---CcccceEeCCH
Q 003042 747 PQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK---PSMAKYYLDDT 823 (854)
Q Consensus 747 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~---~s~A~y~l~~~ 823 (854)
..+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. +.+++. ...|+|++++.
T Consensus 143 ~~~Kp~~~~~~~~~~~l---gi~~~~~i~vGDs~~Di~~a~~aG~~--------------~~~~~~~~~~~~ad~v~~s~ 205 (233)
T 3nas_A 143 AKGKPDPDIFLTAAAML---DVSPADCAAIEDAEAGISAIKSAGMF--------------AVGVGQGQPMLGADLVVRQT 205 (233)
T ss_dssp ------CCHHHHHHHHH---TSCGGGEEEEECSHHHHHHHHHTTCE--------------EEECC-------CSEECSSG
T ss_pred CCCCCChHHHHHHHHHc---CCCHHHEEEEeCCHHHHHHHHHcCCE--------------EEEECCccccccCCEEeCCh
Confidence 34445778999999999 99999999999999999999999973 223322 23899999987
Q ss_pred hH--HHHHHHHHHhccCCCCCCCccC
Q 003042 824 AE--VINLLEGLATESVHSKSASYQE 847 (854)
Q Consensus 824 ~e--V~~~L~~l~~~~~~~~~~~~~~ 847 (854)
++ +..+++.+....++++.+....
T Consensus 206 ~el~~~~~~~~~~~~~~~~~~~~~~~ 231 (233)
T 3nas_A 206 SDLTLELLHEEWEQYRIRESEGHHHH 231 (233)
T ss_dssp GGCCHHHHHHHHHHHHHTC-------
T ss_pred HhCCHHHHHHHHHHHHhhhccccccc
Confidence 76 4466677776666666554433
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.92 E-value=1.2e-09 Score=112.90 Aligned_cols=72 Identities=18% Similarity=0.256 Sum_probs=61.7
Q ss_pred EeeCCcchHHHHHHHHHHHhhCCCC-CCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------Ccccc
Q 003042 745 VKPQGVSKGIVVKNLISTMRSRGKS-PDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------PSMAK 817 (854)
Q Consensus 745 I~p~gvsKg~al~~ll~~l~~~gi~-~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------~s~A~ 817 (854)
..+.+..|+.+++.+++++ |++ ++++++|||+.||++|++.+|.. ++.|.+|+. +..|+
T Consensus 161 ~~~~~kp~~~~~~~~~~~~---g~~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~ad 226 (240)
T 3sd7_A 161 LDGTRVNKNEVIQYVLDLC---NVKDKDKVIMVGDRKYDIIGAKKIGID-----------SIGVLYGYGSFEEISESEPT 226 (240)
T ss_dssp TTSCCCCHHHHHHHHHHHH---TCCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSSCCHHHHHHHCCS
T ss_pred ccCCCCCCHHHHHHHHHHc---CCCCCCcEEEECCCHHHHHHHHHCCCC-----------EEEEeCCCCCHHHHhhcCCC
Confidence 3456778999999999999 999 99999999999999999999973 467777764 26799
Q ss_pred eEeCCHhHHHHHH
Q 003042 818 YYLDDTAEVINLL 830 (854)
Q Consensus 818 y~l~~~~eV~~~L 830 (854)
|++++.+++.++|
T Consensus 227 ~v~~~~~el~~~l 239 (240)
T 3sd7_A 227 YIVENVESIKDIL 239 (240)
T ss_dssp EEESSSTTHHHHH
T ss_pred EEECCHHHHHHHh
Confidence 9999999988776
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.92 E-value=4.3e-10 Score=117.37 Aligned_cols=71 Identities=11% Similarity=0.075 Sum_probs=57.9
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----------Ccccce-
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFACTVGQK----------PSMAKY- 818 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----------~s~A~y- 818 (854)
.++.+++.+++++ |++++++++|||+. ||+.|++.+|.. ++.|..|.. ...|++
T Consensus 163 p~~~~~~~~~~~l---~~~~~~~i~iGD~~~~Di~~a~~aG~~-----------~~~v~~~~~~~~~~~~~~~~~~~~~~ 228 (251)
T 2pke_A 163 KDPQTYARVLSEF---DLPAERFVMIGNSLRSDVEPVLAIGGW-----------GIYTPYAVTWAHEQDHGVAADEPRLR 228 (251)
T ss_dssp CSHHHHHHHHHHH---TCCGGGEEEEESCCCCCCHHHHHTTCE-----------EEECCCC-------------CCTTEE
T ss_pred CCHHHHHHHHHHh---CcCchhEEEECCCchhhHHHHHHCCCE-----------EEEECCCCccccccccccccCCCCee
Confidence 3789999999999 99999999999999 999999999984 345544431 235787
Q ss_pred EeCCHhHHHHHHHHHHh
Q 003042 819 YLDDTAEVINLLEGLAT 835 (854)
Q Consensus 819 ~l~~~~eV~~~L~~l~~ 835 (854)
++++..++..+|..+..
T Consensus 229 ~i~~~~el~~~l~~~~~ 245 (251)
T 2pke_A 229 EVPDPSGWPAAVRALDA 245 (251)
T ss_dssp ECSSGGGHHHHHHHHHH
T ss_pred eeCCHHHHHHHHHHhCh
Confidence 89999999999988763
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.91 E-value=1.6e-09 Score=109.97 Aligned_cols=67 Identities=22% Similarity=0.214 Sum_probs=53.5
Q ss_pred eeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC---CcccceEeCC
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK---PSMAKYYLDD 822 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~---~s~A~y~l~~ 822 (854)
.+.+.+|+.+++.+++.+ |++++++++|||+.||++|++.+|.. +.+... +..|+|++++
T Consensus 137 ~~~~k~k~~~~~~~~~~~---g~~~~~~i~vGDs~~Di~~a~~aG~~--------------~~~~~~~~l~~~ad~v~~~ 199 (217)
T 3m1y_A 137 MMFSHSKGEMLLVLQRLL---NISKTNTLVVGDGANDLSMFKHAHIK--------------IAFNAKEVLKQHATHCINE 199 (217)
T ss_dssp CCSTTHHHHHHHHHHHHH---TCCSTTEEEEECSGGGHHHHTTCSEE--------------EEESCCHHHHTTCSEEECS
T ss_pred CCCCCChHHHHHHHHHHc---CCCHhHEEEEeCCHHHHHHHHHCCCe--------------EEECccHHHHHhcceeecc
Confidence 456788999999999999 99999999999999999999999963 444322 4789999864
Q ss_pred --HhHHHHH
Q 003042 823 --TAEVINL 829 (854)
Q Consensus 823 --~~eV~~~ 829 (854)
..++..+
T Consensus 200 ~dl~~~~~~ 208 (217)
T 3m1y_A 200 PDLALIKPL 208 (217)
T ss_dssp SBGGGGTTC
T ss_pred cCHHHHHHH
Confidence 4444433
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.91 E-value=5.3e-10 Score=113.51 Aligned_cols=70 Identities=11% Similarity=0.043 Sum_probs=54.0
Q ss_pred CcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC---cccceEeCCHhH
Q 003042 749 GVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP---SMAKYYLDDTAE 825 (854)
Q Consensus 749 gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~---s~A~y~l~~~~e 825 (854)
+..|+.+++.+++++ |++++++++|||+.||++|++.+|.. +.+++.+ ..|+|++++.++
T Consensus 144 ~Kp~~~~~~~~~~~l---gi~~~~~i~iGD~~nDi~~a~~aG~~--------------~~~~~~~~~~~~a~~v~~~~~e 206 (221)
T 2wf7_A 144 SKPAPDIFIAAAHAV---GVAPSESIGLEDSQAGIQAIKDSGAL--------------PIGVGRPEDLGDDIVIVPDTSH 206 (221)
T ss_dssp CTTSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE--------------EEEESCHHHHCSSSEEESSGGG
T ss_pred CCCChHHHHHHHHHc---CCChhHeEEEeCCHHHHHHHHHCCCE--------------EEEECCHHHhccccchhcCHHh
Confidence 334566999999999 99999999999999999999999973 3333321 279999988776
Q ss_pred --HHHHHHHHHh
Q 003042 826 --VINLLEGLAT 835 (854)
Q Consensus 826 --V~~~L~~l~~ 835 (854)
+..+++.+..
T Consensus 207 l~~~~~~~~~~~ 218 (221)
T 2wf7_A 207 YTLEFLKEVWLQ 218 (221)
T ss_dssp CCHHHHHHHHHC
T ss_pred CCHHHHHHHHhc
Confidence 4566665543
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.91 E-value=1.8e-11 Score=122.53 Aligned_cols=64 Identities=13% Similarity=0.117 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCCcccceEeCCHhHHHHHHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLE 831 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~s~A~y~l~~~~eV~~~L~ 831 (854)
++.+++.+++++ |++++++++|||+.||++|++.+|.. +++|..|. + .|+|++++..++.++|+
T Consensus 142 ~~~~~~~~~~~~---~i~~~~~~~iGD~~nDi~~~~~aG~~-----------~i~~~~~~-~-~a~~v~~~~~el~~~l~ 205 (207)
T 2go7_A 142 SPEAATYLLDKY---QLNSDNTYYIGDRTLDVEFAQNSGIQ-----------SINFLEST-Y-EGNHRIQALADISRIFE 205 (207)
T ss_dssp SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEESSCCS-C-TTEEECSSTTHHHHHTS
T ss_pred CcHHHHHHHHHh---CCCcccEEEECCCHHHHHHHHHCCCe-----------EEEEecCC-C-CCCEEeCCHHHHHHHHh
Confidence 388999999999 99999999999999999999999973 23444444 4 79999999999887763
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.90 E-value=9.5e-10 Score=115.25 Aligned_cols=74 Identities=16% Similarity=0.115 Sum_probs=62.0
Q ss_pred CCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC----------cccc
Q 003042 748 QGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP----------SMAK 817 (854)
Q Consensus 748 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~----------s~A~ 817 (854)
.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|..|... ..|+
T Consensus 166 ~~Kp~~~~~~~~~~~l---gi~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~ad 231 (259)
T 4eek_A 166 RGKPHPDLYTFAAQQL---GILPERCVVIEDSVTGGAAGLAAGAT-----------LWGLLVPGHPHPDGAAALSRLGAA 231 (259)
T ss_dssp CCTTSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEECCTTSCCSSCHHHHHHHTCS
T ss_pred CCCCChHHHHHHHHHc---CCCHHHEEEEcCCHHHHHHHHHCCCE-----------EEEEccCCCcccccHHHHHhcCcc
Confidence 5566799999999999 99999999999999999999999983 4556656322 4589
Q ss_pred eEeCCHhHHHHHHHHHHh
Q 003042 818 YYLDDTAEVINLLEGLAT 835 (854)
Q Consensus 818 y~l~~~~eV~~~L~~l~~ 835 (854)
|++++..++.++|.....
T Consensus 232 ~vi~~l~el~~~l~~~~~ 249 (259)
T 4eek_A 232 RVLTSHAELRAALAEAGL 249 (259)
T ss_dssp EEECSHHHHHHHHHHTTS
T ss_pred hhhCCHHHHHHHHHhccc
Confidence 999999999999987543
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.90 E-value=8.6e-11 Score=120.84 Aligned_cols=72 Identities=14% Similarity=0.057 Sum_probs=60.1
Q ss_pred eCCcchHHHHHHHHHHHhhCC-CCCCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEe
Q 003042 747 PQGVSKGIVVKNLISTMRSRG-KSPDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYL 820 (854)
Q Consensus 747 p~gvsKg~al~~ll~~l~~~g-i~~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l 820 (854)
..+..|+.+++.+++++ | ++++++++|||+. ||+.|++.+|.. ++.|..|+. +..|+|++
T Consensus 155 ~~~kp~~~~~~~~~~~~---g~~~~~~~i~vGD~~~~Di~~a~~aG~~-----------~i~~~~~~~~~~~~~~ad~v~ 220 (238)
T 3ed5_A 155 GFQKPMKEYFNYVFERI---PQFSAEHTLIIGDSLTADIKGGQLAGLD-----------TCWMNPDMKPNVPEIIPTYEI 220 (238)
T ss_dssp TSCTTCHHHHHHHHHTS---TTCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEECTTCCCCTTCCCCSEEE
T ss_pred CCCCCChHHHHHHHHHc---CCCChhHeEEECCCcHHHHHHHHHCCCE-----------EEEECCCCCCCcccCCCCeEE
Confidence 44666899999999999 9 9999999999998 999999999973 345555532 46799999
Q ss_pred CCHhHHHHHHHH
Q 003042 821 DDTAEVINLLEG 832 (854)
Q Consensus 821 ~~~~eV~~~L~~ 832 (854)
++..++.++|..
T Consensus 221 ~~~~el~~~l~~ 232 (238)
T 3ed5_A 221 RKLEELYHILNI 232 (238)
T ss_dssp SSGGGHHHHHTC
T ss_pred CCHHHHHHHHHh
Confidence 999999988864
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=98.90 E-value=1.7e-10 Score=119.79 Aligned_cols=73 Identities=11% Similarity=0.036 Sum_probs=60.8
Q ss_pred eeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEE----ecC-------CCc
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACT----VGQ-------KPS 814 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~----vG~-------~~s 814 (854)
...+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|. +|. ...
T Consensus 165 ~~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~~~~~~~~g~~~~~~~~~~~ 230 (254)
T 3umg_A 165 NRKYKPDPQAYLRTAQVL---GLHPGEVMLAAAHNGDLEAAHATGLA-----------TAFILRPVEHGPHQTDDLAPTG 230 (254)
T ss_dssp HTCCTTSHHHHHHHHHHT---TCCGGGEEEEESCHHHHHHHHHTTCE-----------EEEECCTTTTCTTCCSCSSCSS
T ss_pred CCCCCCCHHHHHHHHHHc---CCChHHEEEEeCChHhHHHHHHCCCE-----------EEEEecCCcCCCCccccccccC
Confidence 345566899999999999 99999999999999999999999984 34444 443 246
Q ss_pred ccceEeCCHhHHHHHHHH
Q 003042 815 MAKYYLDDTAEVINLLEG 832 (854)
Q Consensus 815 ~A~y~l~~~~eV~~~L~~ 832 (854)
.|+|++++..++.++|..
T Consensus 231 ~~d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 231 SWDISATDITDLAAQLRA 248 (254)
T ss_dssp CCSEEESSHHHHHHHHHH
T ss_pred CCceEECCHHHHHHHhcC
Confidence 789999999999998875
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.89 E-value=1.4e-09 Score=113.02 Aligned_cols=72 Identities=15% Similarity=0.144 Sum_probs=60.6
Q ss_pred eeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC------cccceE
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP------SMAKYY 819 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~------s~A~y~ 819 (854)
.+.+..|+.++..+++++ |++++++++|||+.||+.|++.+|.. +++|++|... ..|+++
T Consensus 161 ~~~~Kp~p~~~~~~~~~l---~~~~~~~~~vGDs~~Di~~a~~aG~~-----------~v~v~~~~~~~~~~~~~~a~~~ 226 (240)
T 2hi0_A 161 GIRRKPAPDMTSECVKVL---GVPRDKCVYIGDSEIDIQTARNSEMD-----------EIAVNWGFRSVPFLQKHGATVI 226 (240)
T ss_dssp TSCCTTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEESSSSSCHHHHHHTTCCCE
T ss_pred CCCCCCCHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCCe-----------EEEECCCCCchhHHHhcCCCEE
Confidence 456777999999999999 99999999999999999999999973 4667777532 368999
Q ss_pred eCCHhHHHHHHH
Q 003042 820 LDDTAEVINLLE 831 (854)
Q Consensus 820 l~~~~eV~~~L~ 831 (854)
+++..++..+|.
T Consensus 227 ~~~~~el~~~l~ 238 (240)
T 2hi0_A 227 VDTAEKLEEAIL 238 (240)
T ss_dssp ECSHHHHHHHHH
T ss_pred ECCHHHHHHHhc
Confidence 999999887764
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.88 E-value=3.2e-10 Score=115.34 Aligned_cols=70 Identities=21% Similarity=0.239 Sum_probs=59.4
Q ss_pred eCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------CcccceEe
Q 003042 747 PQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------PSMAKYYL 820 (854)
Q Consensus 747 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------~s~A~y~l 820 (854)
+.+..|+.+++.+++++ |++|+++++|||+.||+.|++.+|.. +++|++|.. ...|+|++
T Consensus 134 ~~~Kp~p~~~~~~~~~l---g~~p~~~~~vgDs~~Di~~a~~aG~~-----------~i~v~~~~~~~~~l~~~~a~~v~ 199 (210)
T 2ah5_A 134 PEAPHKADVIHQALQTH---QLAPEQAIIIGDTKFDMLGARETGIQ-----------KLAITWGFGEQADLLNYQPDYIA 199 (210)
T ss_dssp SSCCSHHHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSSSCHHHHHTTCCSEEE
T ss_pred CCCCCChHHHHHHHHHc---CCCcccEEEECCCHHHHHHHHHCCCc-----------EEEEcCCCCCHHHHHhCCCCEEE
Confidence 45667999999999999 99999999999999999999999973 467777754 13689999
Q ss_pred CCHhHHHHHH
Q 003042 821 DDTAEVINLL 830 (854)
Q Consensus 821 ~~~~eV~~~L 830 (854)
++..++..+|
T Consensus 200 ~~~~el~~~l 209 (210)
T 2ah5_A 200 HKPLEVLAYF 209 (210)
T ss_dssp SSTTHHHHHT
T ss_pred CCHHHHHHHh
Confidence 9999987654
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=3e-09 Score=113.16 Aligned_cols=74 Identities=8% Similarity=0.041 Sum_probs=58.2
Q ss_pred eCCcchHHHHHHHHHHHhhCCCCC-CeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------CcccceE
Q 003042 747 PQGVSKGIVVKNLISTMRSRGKSP-DFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------PSMAKYY 819 (854)
Q Consensus 747 p~gvsKg~al~~ll~~l~~~gi~~-d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------~s~A~y~ 819 (854)
..+..|+.+++.+++++ |+++ +++++|||+.||+.|++.+|.. .++.++.+.. ...|+|+
T Consensus 201 ~~~Kp~~~~~~~~~~~l---gi~~~~~~i~vGD~~~Di~~a~~aG~~----------~~~~~~~~~~~~~~~~~~~ad~v 267 (282)
T 3nuq_A 201 LVCKPHVKAFEKAMKES---GLARYENAYFIDDSGKNIETGIKLGMK----------TCIHLVENEVNEILGQTPEGAIV 267 (282)
T ss_dssp CCCTTSHHHHHHHHHHH---TCCCGGGEEEEESCHHHHHHHHHHTCS----------EEEEECSCCC----CCCCTTCEE
T ss_pred cCCCcCHHHHHHHHHHc---CCCCcccEEEEcCCHHHHHHHHHCCCe----------EEEEEcCCccccccccCCCCCEE
Confidence 34566999999999999 9998 9999999999999999999973 1233333322 3478899
Q ss_pred eCCHhHHHHHHHHH
Q 003042 820 LDDTAEVINLLEGL 833 (854)
Q Consensus 820 l~~~~eV~~~L~~l 833 (854)
+++..++.++|..+
T Consensus 268 i~sl~el~~~l~~l 281 (282)
T 3nuq_A 268 ISDILELPHVVSDL 281 (282)
T ss_dssp ESSGGGGGGTSGGG
T ss_pred eCCHHHHHHHhhhh
Confidence 99999988776543
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.85 E-value=5.7e-10 Score=113.35 Aligned_cols=65 Identities=11% Similarity=0.079 Sum_probs=52.8
Q ss_pred cchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecC-C----CcccceEeCCHh
Q 003042 750 VSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ-K----PSMAKYYLDDTA 824 (854)
Q Consensus 750 vsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~-~----~s~A~y~l~~~~ 824 (854)
.+|+.+++.+++++ |++++++++|||+.||++|++.+|.. ++.|..|. . +..|+|++++.+
T Consensus 150 kp~~~~~~~~~~~~---~i~~~~~i~iGD~~nDi~~a~~aG~~-----------~~~~~~~~~~~~~~~~~a~~v~~~~~ 215 (226)
T 1te2_A 150 KPHPQVYLDCAAKL---GVDPLTCVALEDSVNGMIASKAARMR-----------SIVVPAPEAQNDPRFVLANVKLSSLT 215 (226)
T ss_dssp TTSTHHHHHHHHHH---TSCGGGEEEEESSHHHHHHHHHTTCE-----------EEECCCTTTTTCGGGGGSSEECSCGG
T ss_pred CCChHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHcCCE-----------EEEEcCCCCcccccccccCeEECCHH
Confidence 34599999999999 99999999999999999999999973 23344442 2 467999999988
Q ss_pred HHHH
Q 003042 825 EVIN 828 (854)
Q Consensus 825 eV~~ 828 (854)
++..
T Consensus 216 el~~ 219 (226)
T 1te2_A 216 ELTA 219 (226)
T ss_dssp GCCH
T ss_pred HHhH
Confidence 8654
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.84 E-value=4.3e-09 Score=107.52 Aligned_cols=72 Identities=8% Similarity=-0.023 Sum_probs=58.5
Q ss_pred CCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC-----CcccceEeCC
Q 003042 748 QGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK-----PSMAKYYLDD 822 (854)
Q Consensus 748 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~-----~s~A~y~l~~ 822 (854)
.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|..|.. +..|+|++++
T Consensus 150 ~~kp~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 215 (230)
T 3um9_A 150 LFKPHQKVYELAMDTL---HLGESEILFVSCNSWDATGAKYFGYP-----------VCWINRSNGVFDQLGVVPDIVVSD 215 (230)
T ss_dssp CCTTCHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHHTCC-----------EEEECTTSCCCCCSSCCCSEEESS
T ss_pred cCCCChHHHHHHHHHh---CCCcccEEEEeCCHHHHHHHHHCCCE-----------EEEEeCCCCccccccCCCcEEeCC
Confidence 3455889999999999 99999999999999999999999984 344444421 3589999999
Q ss_pred HhHHHHHHHHH
Q 003042 823 TAEVINLLEGL 833 (854)
Q Consensus 823 ~~eV~~~L~~l 833 (854)
..++..+|..+
T Consensus 216 ~~el~~~l~~~ 226 (230)
T 3um9_A 216 VGVLASRFSPV 226 (230)
T ss_dssp HHHHHHTCCC-
T ss_pred HHHHHHHHHHh
Confidence 99998887654
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.83 E-value=4.2e-09 Score=111.28 Aligned_cols=59 Identities=14% Similarity=0.237 Sum_probs=46.7
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccce
Q 003042 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGL 648 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~l 648 (854)
+|+|+||+||||++ ....+ +.+.++|+++ ++.|+.++++|||+......+...+..+++
T Consensus 1 ik~i~~D~DGtL~~---~~~~~-~~~~~~l~~l-~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~ 59 (263)
T 1zjj_A 1 MVAIIFDMDGVLYR---GNRAI-PGVRELIEFL-KERGIPFAFLTNNSTKTPEMYREKLLKMGI 59 (263)
T ss_dssp CEEEEEECBTTTEE---TTEEC-TTHHHHHHHH-HHHTCCEEEEESCCSSCHHHHHHHHHTTTC
T ss_pred CeEEEEeCcCceEe---CCEeC-ccHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 48999999999998 55444 6889999999 889999999999998777666544333333
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.83 E-value=1.4e-09 Score=109.29 Aligned_cols=68 Identities=18% Similarity=0.177 Sum_probs=55.2
Q ss_pred CCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecC---CCcccceEeCCHh
Q 003042 748 QGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ---KPSMAKYYLDDTA 824 (854)
Q Consensus 748 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~---~~s~A~y~l~~~~ 824 (854)
.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.+..|. .+..|++++++..
T Consensus 143 ~~kp~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~a~~~~~~~~ 208 (214)
T 3e58_A 143 ESKPNPEIYLTALKQL---NVQASRALIIEDSEKGIAAGVAADVE-----------VWAIRDNEFGMDQSAAKGLLDSLT 208 (214)
T ss_dssp SCTTSSHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHHHTTCE-----------EEEECCSSSCCCCTTSSEEESSGG
T ss_pred CCCCChHHHHHHHHHc---CCChHHeEEEeccHhhHHHHHHCCCE-----------EEEECCCCccchhccHHHHHHHHH
Confidence 4455789999999999 99999999999999999999999973 34444332 2378999999998
Q ss_pred HHHHH
Q 003042 825 EVINL 829 (854)
Q Consensus 825 eV~~~ 829 (854)
++.++
T Consensus 209 el~~~ 213 (214)
T 3e58_A 209 DVLDL 213 (214)
T ss_dssp GGGGG
T ss_pred HHHhh
Confidence 87654
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.82 E-value=1.6e-10 Score=122.94 Aligned_cols=67 Identities=9% Similarity=-0.007 Sum_probs=55.8
Q ss_pred eeCCcchHHHHHHHHHHHhhCCC-------CCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC-----C
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGK-------SPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK-----P 813 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi-------~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~-----~ 813 (854)
.+.+..|+.+++.+++++ |+ +++++++|||+.||++|++.+|.. ++.|++|.. +
T Consensus 166 ~~~~kp~~~~~~~~~~~l---gi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~-----------~i~v~~~~~~~~~~~ 231 (275)
T 2qlt_A 166 VKQGKPHPEPYLKGRNGL---GFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCK-----------IVGIATTFDLDFLKE 231 (275)
T ss_dssp CSSCTTSSHHHHHHHHHT---TCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCE-----------EEEESSSSCHHHHTT
T ss_pred CCCCCCChHHHHHHHHHc---CCCccccCCCcceEEEEeCCHHHHHHHHHcCCE-----------EEEECCCCCHHHHhh
Confidence 355677999999999999 99 999999999999999999999974 456666653 3
Q ss_pred cccceEeCCHhHH
Q 003042 814 SMAKYYLDDTAEV 826 (854)
Q Consensus 814 s~A~y~l~~~~eV 826 (854)
..|+|++++.+++
T Consensus 232 ~~ad~v~~~~~el 244 (275)
T 2qlt_A 232 KGCDIIVKNHESI 244 (275)
T ss_dssp SSCSEEESSGGGE
T ss_pred CCCCEEECChHHc
Confidence 4689999987764
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=98.82 E-value=5.8e-09 Score=104.27 Aligned_cols=59 Identities=20% Similarity=0.171 Sum_probs=45.9
Q ss_pred hhcCCeEEEEecCCCCCCCC---------------------CCCCCCCHHHHHHHHHcccCCCCeEEEEcCCC-ccchhh
Q 003042 581 NKTNSRLILLDYDGTVMPQT---------------------SEDKRPSTEVLSILNDLCNDPKNAVFIVSGRG-KDSLGN 638 (854)
Q Consensus 581 ~~~~~klI~~DlDGTLl~~~---------------------~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~-~~~l~~ 638 (854)
..+++|+|+||+||||++.. .....+.+.+.++|++| ++.|+.++|+||++ ...+..
T Consensus 23 m~~~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L-~~~G~~v~ivT~~~~~~~~~~ 101 (187)
T 2wm8_A 23 MARLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRL-QSLGVPGAAASRTSEIEGANQ 101 (187)
T ss_dssp HHTSCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHH-HHHTCCEEEEECCSCHHHHHH
T ss_pred HHhccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHH-HHCCceEEEEeCCCChHHHHH
Confidence 34468999999999999421 02335678899999999 78899999999998 566666
Q ss_pred hh
Q 003042 639 WF 640 (854)
Q Consensus 639 ~~ 640 (854)
++
T Consensus 102 ~l 103 (187)
T 2wm8_A 102 LL 103 (187)
T ss_dssp HH
T ss_pred HH
Confidence 65
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.82 E-value=2.2e-09 Score=111.19 Aligned_cols=80 Identities=15% Similarity=0.208 Sum_probs=64.1
Q ss_pred eCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC-------cccce
Q 003042 747 PQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFACTVGQKP-------SMAKY 818 (854)
Q Consensus 747 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~-------s~A~y 818 (854)
..+..|+.+++.+++++ |++++++++|||+. ||+.|++.+|.. ++.|..|... ..|++
T Consensus 147 ~~~Kp~~~~~~~~~~~~---g~~~~~~i~iGD~~~~Di~~a~~aG~~-----------~~~v~~g~~~~~~~~~~~~~~~ 212 (241)
T 2hoq_A 147 GVKKPHPKIFKKALKAF---NVKPEEALMVGDRLYSDIYGAKRVGMK-----------TVWFRYGKHSERELEYRKYADY 212 (241)
T ss_dssp TCCTTCHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEECCSCCCHHHHTTGGGCSE
T ss_pred CCCCCCHHHHHHHHHHc---CCCcccEEEECCCchHhHHHHHHCCCE-----------EEEECCCCCCcccccccCCCCE
Confidence 34556789999999999 99999999999998 999999999984 4566666531 27899
Q ss_pred EeCCHhHHHHHHHHHHhccCCC
Q 003042 819 YLDDTAEVINLLEGLATESVHS 840 (854)
Q Consensus 819 ~l~~~~eV~~~L~~l~~~~~~~ 840 (854)
++++..++..+|..+.......
T Consensus 213 ~i~~~~el~~~l~~~~~~~~~~ 234 (241)
T 2hoq_A 213 EIDNLESLLEVLARESSSNKKV 234 (241)
T ss_dssp EESSTTHHHHHHHHCCSCSSCS
T ss_pred EECCHHHHHHHHHHHhhccCCC
Confidence 9999999999988765444333
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=98.81 E-value=6.3e-10 Score=114.22 Aligned_cols=72 Identities=10% Similarity=0.014 Sum_probs=57.6
Q ss_pred CcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccE-EEEEecCC-----CcccceEeCC
Q 003042 749 GVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEV-FACTVGQK-----PSMAKYYLDD 822 (854)
Q Consensus 749 gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~-~aV~vG~~-----~s~A~y~l~~ 822 (854)
+-.|..+++.+++++ |++++++++|||+.+|+.|.+.+|.. + +.|..|.. ...++|++++
T Consensus 136 ~KP~~~~~~~~~~~~---~i~~~~~~~VGD~~~Di~~a~~aG~~-----------~~i~v~~g~~~~~~~~~~~~~~i~~ 201 (218)
T 2o2x_A 136 RKPNPGMLVEAGKRL---ALDLQRSLIVGDKLADMQAGKRAGLA-----------QGWLVDGEAAVQPGFAIRPLRDSSE 201 (218)
T ss_dssp STTSCHHHHHHHHHH---TCCGGGCEEEESSHHHHHHHHHTTCS-----------EEEEETCCCEEETTEEEEEESSHHH
T ss_pred CCCCHHHHHHHHHHc---CCCHHHEEEEeCCHHHHHHHHHCCCC-----------EeEEEecCCCCcccccCCCCEeccc
Confidence 344778999999999 99999999999999999999999973 3 45555642 2357788888
Q ss_pred HhHHHHHHHHHH
Q 003042 823 TAEVINLLEGLA 834 (854)
Q Consensus 823 ~~eV~~~L~~l~ 834 (854)
..++..+|..+.
T Consensus 202 l~el~~~l~~~~ 213 (218)
T 2o2x_A 202 LGDLLAAIETLG 213 (218)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHHh
Confidence 888888887653
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.81 E-value=3.3e-10 Score=116.33 Aligned_cols=72 Identities=14% Similarity=0.252 Sum_probs=59.5
Q ss_pred CcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC---cccceEeCCHhH
Q 003042 749 GVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP---SMAKYYLDDTAE 825 (854)
Q Consensus 749 gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~---s~A~y~l~~~~e 825 (854)
+-.|+.+++.+++++ |++++++++|||+.||+.|++.+|.. +++|.+|..+ ..|++++++..+
T Consensus 138 ~Kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~e 203 (222)
T 2nyv_A 138 KKPSPTPVLKTLEIL---GEEPEKALIVGDTDADIEAGKRAGTK-----------TALALWGYVKLNSQIPDFTLSRPSD 203 (222)
T ss_dssp TCCTTHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEETTSSCSCCCCCCSEEESSTTH
T ss_pred CCCChHHHHHHHHHh---CCCchhEEEECCCHHHHHHHHHCCCe-----------EEEEcCCCCCccccCCCEEECCHHH
Confidence 346899999999999 99999999999999999999999973 3556666432 568899999999
Q ss_pred HHHHHHHHH
Q 003042 826 VINLLEGLA 834 (854)
Q Consensus 826 V~~~L~~l~ 834 (854)
+.++|..+.
T Consensus 204 l~~~l~~~~ 212 (222)
T 2nyv_A 204 LVKLMDNHI 212 (222)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHHhh
Confidence 988876543
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.80 E-value=8e-09 Score=105.82 Aligned_cols=70 Identities=7% Similarity=-0.053 Sum_probs=56.9
Q ss_pred cchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecC-C----CcccceEeCCHh
Q 003042 750 VSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ-K----PSMAKYYLDDTA 824 (854)
Q Consensus 750 vsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~-~----~s~A~y~l~~~~ 824 (854)
..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|..|. . +..|+|++++..
T Consensus 155 kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~~G~~-----------~~~v~~~~~~~~~~~~~~~~v~~~~~ 220 (233)
T 3umb_A 155 KTAPAAYALAPRAF---GVPAAQILFVSSNGWDACGATWHGFT-----------TFWINRLGHPPEALDVAPAAAGHDMR 220 (233)
T ss_dssp TTSHHHHTHHHHHH---TSCGGGEEEEESCHHHHHHHHHHTCE-----------EEEECTTCCCCCSSSCCCSEEESSHH
T ss_pred CcCHHHHHHHHHHh---CCCcccEEEEeCCHHHHHHHHHcCCE-----------EEEEcCCCCCchhccCCCCEEECCHH
Confidence 34778899999999 99999999999999999999999973 23444432 2 356999999999
Q ss_pred HHHHHHHHH
Q 003042 825 EVINLLEGL 833 (854)
Q Consensus 825 eV~~~L~~l 833 (854)
++.++|+..
T Consensus 221 el~~~l~~~ 229 (233)
T 3umb_A 221 DLLQFVQAR 229 (233)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHHh
Confidence 999988754
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.6e-08 Score=101.35 Aligned_cols=76 Identities=12% Similarity=0.010 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCC-cccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC--------cccceEeC-
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDD-RSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP--------SMAKYYLD- 821 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs-~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~--------s~A~y~l~- 821 (854)
+....+.+++.+ |++++++++|||+ .+|+.+.+.+|.. ++.|..|... ..++++++
T Consensus 99 ~p~~~~~~~~~~---~~~~~~~l~VGD~~~~Di~~A~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~v~~~ 164 (189)
T 3ib6_A 99 DKTIFDFTLNAL---QIDKTEAVMVGNTFESDIIGANRAGIH-----------AIWLQNPEVCLQDERLPLVAPPFVIPV 164 (189)
T ss_dssp SHHHHHHHHHHH---TCCGGGEEEEESBTTTTHHHHHHTTCE-----------EEEECCTTTCBCSSCCCBCSSSCEEEE
T ss_pred CHHHHHHHHHHc---CCCcccEEEECCCcHHHHHHHHHCCCe-----------EEEECCccccccccccccCCCcceecc
Confidence 556788899998 9999999999999 7999999999973 3445444321 27889999
Q ss_pred -CHhHHHHHHHHHHhccCCCC
Q 003042 822 -DTAEVINLLEGLATESVHSK 841 (854)
Q Consensus 822 -~~~eV~~~L~~l~~~~~~~~ 841 (854)
+..++.++|+-+-+..++.+
T Consensus 165 ~~l~~l~~~l~l~~~~~~~~~ 185 (189)
T 3ib6_A 165 WDLADVPEALLLLKKISEGHH 185 (189)
T ss_dssp SSGGGHHHHHHHHHHHC----
T ss_pred ccHHhHHHHHHHHHHhhcccc
Confidence 99999998877666555443
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.77 E-value=3.1e-08 Score=103.45 Aligned_cols=74 Identities=12% Similarity=0.091 Sum_probs=59.6
Q ss_pred CcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEe-------------------
Q 003042 749 GVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTV------------------- 809 (854)
Q Consensus 749 gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~v------------------- 809 (854)
+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.+..
T Consensus 146 ~Kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~l~~g~~~~~~ 211 (253)
T 1qq5_A 146 FKPHPDSYALVEEVL---GVTPAEVLFVSSNGFDVGGAKNFGFS-----------VARVARLSQEALARELVSGTIAPLT 211 (253)
T ss_dssp CTTSHHHHHHHHHHH---CCCGGGEEEEESCHHHHHHHHHHTCE-----------EEEECCSCHHHHHHHTTSSSCCHHH
T ss_pred CCCCHHHHHHHHHHc---CCCHHHEEEEeCChhhHHHHHHCCCE-----------EEEECCcccchhhhhcccccccccc
Confidence 445888999999999 99999999999999999999999974 344444
Q ss_pred ----cC-----CCcccceEeCCHhHHHHHHHHHHhc
Q 003042 810 ----GQ-----KPSMAKYYLDDTAEVINLLEGLATE 836 (854)
Q Consensus 810 ----G~-----~~s~A~y~l~~~~eV~~~L~~l~~~ 836 (854)
|. .+..|+|++++..++.++|..+...
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~ 247 (253)
T 1qq5_A 212 MFKALRMREETYAEAPDFVVPALGDLPRLVRGMAGA 247 (253)
T ss_dssp HHHHHHSSCCTTSCCCSEEESSGGGHHHHHHHHC--
T ss_pred cccccccccCCCCCCCCeeeCCHHHHHHHHHHhccc
Confidence 21 1356899999999999999887643
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.76 E-value=7.6e-10 Score=111.89 Aligned_cols=68 Identities=16% Similarity=0.217 Sum_probs=55.0
Q ss_pred Ccch--HHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC-C---cccceEeCC
Q 003042 749 GVSK--GIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK-P---SMAKYYLDD 822 (854)
Q Consensus 749 gvsK--g~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~-~---s~A~y~l~~ 822 (854)
+.+| +.+++.+++++ |++++++++|||+.||++|++.+|.. ++.+.+|.. . ..|+|++++
T Consensus 135 ~~~KP~~~~~~~~~~~~---~~~~~~~i~vGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~~a~~~~~~ 200 (209)
T 2hdo_A 135 PKRKPDPLPLLTALEKV---NVAPQNALFIGDSVSDEQTAQAANVD-----------FGLAVWGMDPNADHQKVAHRFQK 200 (209)
T ss_dssp SCCTTSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEEGGGCCTTGGGSCCSEEESS
T ss_pred CCCCCCcHHHHHHHHHc---CCCcccEEEECCChhhHHHHHHcCCe-----------EEEEcCCCCChhhhccCCEEeCC
Confidence 5678 99999999999 99999999999999999999999973 344445542 1 128999999
Q ss_pred HhHHHHHH
Q 003042 823 TAEVINLL 830 (854)
Q Consensus 823 ~~eV~~~L 830 (854)
..++.++|
T Consensus 201 ~~el~~~l 208 (209)
T 2hdo_A 201 PLDILELF 208 (209)
T ss_dssp GGGGGGGC
T ss_pred HHHHHHhh
Confidence 88876654
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.75 E-value=3.6e-10 Score=115.37 Aligned_cols=67 Identities=15% Similarity=0.098 Sum_probs=54.2
Q ss_pred cchHHHHHHHHHHHhhCCCCCCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEE----EecCC-----CcccceE
Q 003042 750 VSKGIVVKNLISTMRSRGKSPDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFAC----TVGQK-----PSMAKYY 819 (854)
Q Consensus 750 vsKg~al~~ll~~l~~~gi~~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV----~vG~~-----~s~A~y~ 819 (854)
-.|+.+++.+++++ |++++++++|||+. ||+.|++.+|.. ++.| ++|+. ...|+|+
T Consensus 157 kpk~~~~~~~~~~l---gi~~~~~i~iGD~~~~Di~~a~~aG~~-----------~v~v~~~~~~g~~~~~~~~~~~d~v 222 (234)
T 3ddh_A 157 DKTEKEYLRLLSIL---QIAPSELLMVGNSFKSDIQPVLSLGGY-----------GVHIPFEVMWKHEVTETFAHERLKQ 222 (234)
T ss_dssp CCSHHHHHHHHHHH---TCCGGGEEEEESCCCCCCHHHHHHTCE-----------EEECCCCTTCCCC---CCCCTTEEE
T ss_pred CCCHHHHHHHHHHh---CCCcceEEEECCCcHHHhHHHHHCCCe-----------EEEecCCcccccCCcccccCCCcee
Confidence 35999999999999 99999999999996 999999999984 2334 33432 2345899
Q ss_pred eCCHhHHHHHH
Q 003042 820 LDDTAEVINLL 830 (854)
Q Consensus 820 l~~~~eV~~~L 830 (854)
+++..|+.++|
T Consensus 223 ~~~l~el~~~l 233 (234)
T 3ddh_A 223 VKRLDDLLSLL 233 (234)
T ss_dssp CSSGGGHHHHC
T ss_pred cccHHHHHHhc
Confidence 99999988765
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.6e-08 Score=102.16 Aligned_cols=70 Identities=10% Similarity=-0.068 Sum_probs=55.8
Q ss_pred hHHHHHHHHHHHhhCCCCC-CeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------------------
Q 003042 752 KGIVVKNLISTMRSRGKSP-DFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------------------ 812 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~-d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------------------ 812 (854)
+...+..+++.+ |+.+ +++++|||+.+|+.+.+.+|.. +++|.+|..
T Consensus 89 ~p~~~~~a~~~l---~~~~~~~~v~VGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~e~~ 154 (196)
T 2oda_A 89 QPDACWMALMAL---NVSQLEGCVLISGDPRLLQSGLNAGLW-----------TIGLASCGPLCGLSPSQWQALNNAERE 154 (196)
T ss_dssp STHHHHHHHHHT---TCSCSTTCEEEESCHHHHHHHHHHTCE-----------EEEESSSSTTTCCCHHHHHHSCHHHHH
T ss_pred ChHHHHHHHHHc---CCCCCccEEEEeCCHHHHHHHHHCCCE-----------EEEEccCCccccccHHHhhhcchhhhh
Confidence 445667778888 8865 8999999999999999999973 467777743
Q ss_pred -----------CcccceEeCCHhHHHHHHHHHHh
Q 003042 813 -----------PSMAKYYLDDTAEVINLLEGLAT 835 (854)
Q Consensus 813 -----------~s~A~y~l~~~~eV~~~L~~l~~ 835 (854)
...|+|++++..++..+|..+.+
T Consensus 155 ~~~~~~~~~l~~~~~d~vi~~~~eL~~~l~~~~~ 188 (196)
T 2oda_A 155 QRRAQATLKLYSLGVHSVIDHLGELESCLADIAL 188 (196)
T ss_dssp HHHHHHHHHHHHTTCSEEESSGGGHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCCEEeCCHHHHHHHHHHHHH
Confidence 13589999999999998887654
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.75 E-value=1.1e-09 Score=114.25 Aligned_cols=80 Identities=26% Similarity=0.341 Sum_probs=60.4
Q ss_pred CEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC
Q 003042 733 PVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK 812 (854)
Q Consensus 733 ~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~ 812 (854)
+..+..+....+.+| |+.+++.+++++ |++++++++|||+.||++|++.+|.. ++.|.+|..
T Consensus 157 f~~~~~~~~~~~~Kp----~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~ 218 (243)
T 2hsz_A 157 FSEMLGGQSLPEIKP----HPAPFYYLCGKF---GLYPKQILFVGDSQNDIFAAHSAGCA-----------VVGLTYGYN 218 (243)
T ss_dssp CSEEECTTTSSSCTT----SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSCS
T ss_pred EEEEEecccCCCCCc----CHHHHHHHHHHh---CcChhhEEEEcCCHHHHHHHHHCCCe-----------EEEEcCCCC
Confidence 334444444333344 788999999999 99999999999999999999999973 456666632
Q ss_pred ------CcccceEeCCHhHHHHHH
Q 003042 813 ------PSMAKYYLDDTAEVINLL 830 (854)
Q Consensus 813 ------~s~A~y~l~~~~eV~~~L 830 (854)
...|++++++..++.++|
T Consensus 219 ~~~~~~~~~ad~vi~~~~el~~~l 242 (243)
T 2hsz_A 219 YNIPIAQSKPDWIFDDFADILKIT 242 (243)
T ss_dssp TTCCGGGGCCSEEESSGGGGGGGT
T ss_pred chhhhhhCCCCEEECCHHHHHHHh
Confidence 356889999988876544
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.75 E-value=5e-08 Score=97.17 Aligned_cols=66 Identities=26% Similarity=0.490 Sum_probs=55.5
Q ss_pred EeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCCcccceEeCCHh
Q 003042 745 VKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTA 824 (854)
Q Consensus 745 I~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~s~A~y~l~~~~ 824 (854)
..|...+|+.+++.+ +++++++|||+.||++|++.+|. +|.+++....|+|++++.+
T Consensus 134 ~~~~~~~k~~~l~~l---------~~~~~i~iGD~~~Di~~~~~ag~--------------~v~~~~~~~~ad~v~~~~~ 190 (201)
T 4ap9_A 134 IRLRFRDKGEFLKRF---------RDGFILAMGDGYADAKMFERADM--------------GIAVGREIPGADLLVKDLK 190 (201)
T ss_dssp EECCSSCHHHHHGGG---------TTSCEEEEECTTCCHHHHHHCSE--------------EEEESSCCTTCSEEESSHH
T ss_pred CcCCccCHHHHHHhc---------CcCcEEEEeCCHHHHHHHHhCCc--------------eEEECCCCccccEEEccHH
Confidence 455566798888766 57899999999999999999985 5778876559999999999
Q ss_pred HHHHHHHHH
Q 003042 825 EVINLLEGL 833 (854)
Q Consensus 825 eV~~~L~~l 833 (854)
++.++|+.+
T Consensus 191 el~~~l~~l 199 (201)
T 4ap9_A 191 ELVDFIKNL 199 (201)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHh
Confidence 999998865
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.74 E-value=8.3e-10 Score=115.05 Aligned_cols=73 Identities=15% Similarity=0.141 Sum_probs=60.2
Q ss_pred eCCcchHHHHHHHHHHHhhCCCCC--CeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEe
Q 003042 747 PQGVSKGIVVKNLISTMRSRGKSP--DFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYL 820 (854)
Q Consensus 747 p~gvsKg~al~~ll~~l~~~gi~~--d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l 820 (854)
..+..|+.+++.+++++ |+++ +++++|||+.||++|++.+|.. ++.|..|+. +..|+|++
T Consensus 168 ~~~Kp~~~~~~~~~~~l---gi~~~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~~~~ad~v~ 233 (250)
T 3l5k_A 168 QHGKPDPDIFLACAKRF---SPPPAMEKCLVFEDAPNGVEAALAAGMQ-----------VVMVPDGNLSRDLTTKATLVL 233 (250)
T ss_dssp CSCTTSTHHHHHHHHTS---SSCCCGGGEEEEESSHHHHHHHHHTTCE-----------EEECCCTTSCGGGSTTSSEEC
T ss_pred cCCCCChHHHHHHHHHc---CCCCCcceEEEEeCCHHHHHHHHHcCCE-----------EEEEcCCCCchhhcccccEee
Confidence 44556888999999999 9988 9999999999999999999973 466777763 47899999
Q ss_pred CCHhHHHHHHHHH
Q 003042 821 DDTAEVINLLEGL 833 (854)
Q Consensus 821 ~~~~eV~~~L~~l 833 (854)
++..++...|..+
T Consensus 234 ~sl~el~~~l~~l 246 (250)
T 3l5k_A 234 NSLQDFQPELFGL 246 (250)
T ss_dssp SCGGGCCGGGGTC
T ss_pred cCHHHhhHHHhcC
Confidence 9999887665443
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.72 E-value=3.1e-09 Score=109.13 Aligned_cols=72 Identities=10% Similarity=0.026 Sum_probs=56.6
Q ss_pred CCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC-----CcccceEeCC
Q 003042 748 QGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK-----PSMAKYYLDD 822 (854)
Q Consensus 748 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~-----~s~A~y~l~~ 822 (854)
.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|..|.. +..|+|++++
T Consensus 149 ~~Kp~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 214 (232)
T 1zrn_A 149 VYKPDNRVYELAEQAL---GLDRSAILFVASNAWDATGARYFGFP-----------TCWINRTGNVFEEMGQTPDWEVTS 214 (232)
T ss_dssp CCTTSHHHHHHHHHHH---TSCGGGEEEEESCHHHHHHHHHHTCC-----------EEEECTTCCCCCSSSCCCSEEESS
T ss_pred CCCCCHHHHHHHHHHc---CCCcccEEEEeCCHHHHHHHHHcCCE-----------EEEEcCCCCCccccCCCCCEEECC
Confidence 4556788999999999 99999999999999999999999974 344444421 3568999999
Q ss_pred HhHHHHHHHHH
Q 003042 823 TAEVINLLEGL 833 (854)
Q Consensus 823 ~~eV~~~L~~l 833 (854)
..++..+|..+
T Consensus 215 ~~el~~~l~~~ 225 (232)
T 1zrn_A 215 LRAVVELFETA 225 (232)
T ss_dssp HHHHHTTC---
T ss_pred HHHHHHHHHhh
Confidence 99998877654
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.71 E-value=8.8e-09 Score=105.68 Aligned_cols=72 Identities=21% Similarity=0.178 Sum_probs=58.6
Q ss_pred eCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEEEecC---CCcccceEeCC
Q 003042 747 PQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFACTVGQ---KPSMAKYYLDD 822 (854)
Q Consensus 747 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~---~~s~A~y~l~~ 822 (854)
..+..|+.+++.+++++ |++++++++|||+. ||++|++.+|.. ++.+..|. .+..|+|++++
T Consensus 159 ~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~~d~vi~s 224 (240)
T 3qnm_A 159 GVLKPRPEIFHFALSAT---QSELRESLMIGDSWEADITGAHGVGMH-----------QAFYNVTERTVFPFQPTYHIHS 224 (240)
T ss_dssp TCCTTSHHHHHHHHHHT---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEECCSCCCCCSSCCSEEESS
T ss_pred CCCCCCHHHHHHHHHHc---CCCcccEEEECCCchHhHHHHHHcCCe-----------EEEEcCCCCCCcCCCCceEECC
Confidence 45667899999999999 99999999999995 999999999973 33444443 24689999999
Q ss_pred HhHHHHHHHH
Q 003042 823 TAEVINLLEG 832 (854)
Q Consensus 823 ~~eV~~~L~~ 832 (854)
..|+..+++.
T Consensus 225 l~e~~~~~~~ 234 (240)
T 3qnm_A 225 LKELMNLLEG 234 (240)
T ss_dssp THHHHHHTC-
T ss_pred HHHHHHHHhc
Confidence 9999887653
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=2.4e-08 Score=105.60 Aligned_cols=61 Identities=20% Similarity=0.268 Sum_probs=50.6
Q ss_pred cchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEe--CCH
Q 003042 750 VSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYL--DDT 823 (854)
Q Consensus 750 vsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l--~~~ 823 (854)
.+|+.+++.+.+.+ ++++|||+.||++|++.+|. +|+||+. +..|++++ ++.
T Consensus 193 ~~k~~~~k~~~~~~--------~~~~vGD~~nDi~~~~~Ag~--------------~va~~~~~~~~~~~a~~~~~~~~~ 250 (280)
T 3skx_A 193 HEKAEKVKEVQQKY--------VTAMVGDGVNDAPALAQADV--------------GIAIGAGTDVAVETADIVLVRNDP 250 (280)
T ss_dssp GGHHHHHHHHHTTS--------CEEEEECTTTTHHHHHHSSE--------------EEECSCCSSSCCCSSSEECSSCCT
T ss_pred HHHHHHHHHHHhcC--------CEEEEeCCchhHHHHHhCCc--------------eEEecCCcHHHHhhCCEEEeCCCH
Confidence 37999988887642 78999999999999999984 7888864 45788888 889
Q ss_pred hHHHHHHHH
Q 003042 824 AEVINLLEG 832 (854)
Q Consensus 824 ~eV~~~L~~ 832 (854)
++|.++|+.
T Consensus 251 ~~l~~~l~~ 259 (280)
T 3skx_A 251 RDVAAIVEL 259 (280)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998874
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=98.64 E-value=9.6e-09 Score=105.24 Aligned_cols=67 Identities=7% Similarity=0.055 Sum_probs=51.4
Q ss_pred HHHHHHHHHHhhCCCCCCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEEEe-------cC-----CCcccceEe
Q 003042 754 IVVKNLISTMRSRGKSPDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFACTV-------GQ-----KPSMAKYYL 820 (854)
Q Consensus 754 ~al~~ll~~l~~~gi~~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV~v-------G~-----~~s~A~y~l 820 (854)
.+++. ++++ |++++++++|||+. ||+.|++.+|.. ++.+.- |+ ....|+|++
T Consensus 160 ~~l~~-~~~l---gi~~~~~~~vGD~~~~Di~~a~~aG~~-----------~~~~~~~~~~~g~g~~~~~~~~~~ad~v~ 224 (240)
T 3smv_A 160 YMIDA-LAKA---GIEKKDILHTAESLYHDHIPANDAGLV-----------SAWIYRRHGKEGYGATHVPSRMPNVDFRF 224 (240)
T ss_dssp HHHHH-HHHT---TCCGGGEEEEESCTTTTHHHHHHHTCE-----------EEEECTTCC-------CCCSSCCCCSEEE
T ss_pred HHHHH-HHhc---CCCchhEEEECCCchhhhHHHHHcCCe-----------EEEEcCCCcccCCCCCCCCcCCCCCCEEe
Confidence 34444 7888 99999999999996 999999999974 222221 22 247899999
Q ss_pred CCHhHHHHHHHHHHh
Q 003042 821 DDTAEVINLLEGLAT 835 (854)
Q Consensus 821 ~~~~eV~~~L~~l~~ 835 (854)
++..++.++|..+.+
T Consensus 225 ~~~~el~~~l~~~l~ 239 (240)
T 3smv_A 225 NSMGEMAEAHKQALK 239 (240)
T ss_dssp SSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhc
Confidence 999999999987653
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=98.62 E-value=1.2e-08 Score=102.49 Aligned_cols=67 Identities=9% Similarity=0.060 Sum_probs=54.9
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC-----CcccceEeCCHhH
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK-----PSMAKYYLDDTAE 825 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~-----~s~A~y~l~~~~e 825 (854)
.|+.+++.+++++ | ++++++|||+.||+.|++.+|.. ++.|..|.. ...|++++++..+
T Consensus 129 p~~~~~~~~~~~~---~--~~~~~~vGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~e 192 (201)
T 2w43_A 129 PSPKVYKYFLDSI---G--AKEAFLVSSNAFDVIGAKNAGMR-----------SIFVNRKNTIVDPIGGKPDVIVNDFKE 192 (201)
T ss_dssp TCHHHHHHHHHHH---T--CSCCEEEESCHHHHHHHHHTTCE-----------EEEECSSSCCCCTTSCCCSEEESSHHH
T ss_pred CCHHHHHHHHHhc---C--CCcEEEEeCCHHHhHHHHHCCCE-----------EEEECCCCCCccccCCCCCEEECCHHH
Confidence 3599999999999 7 89999999999999999999973 345555422 2468999999999
Q ss_pred HHHHHHHH
Q 003042 826 VINLLEGL 833 (854)
Q Consensus 826 V~~~L~~l 833 (854)
+.++|..+
T Consensus 193 l~~~l~~~ 200 (201)
T 2w43_A 193 LYEWILRY 200 (201)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99888764
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=98.61 E-value=1.6e-06 Score=96.89 Aligned_cols=244 Identities=11% Similarity=0.043 Sum_probs=144.1
Q ss_pred HHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhh--cCCeEeecCHHHHH
Q 003042 182 KVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLL--NSDLIGFHTFDYAR 259 (854)
Q Consensus 182 ~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll--~~dligf~t~~~~~ 259 (854)
++++..+| |+|.+|+.--..++ .+..+..++|++ ..+.+..+.+ .++.+++.+-+. .+|++-..+....+
T Consensus 88 ~~l~~~kP--D~Vlv~gd~~~~~a-alaA~~~~IPv~-h~eaglrs~~----~~~pee~nR~~~~~~a~~~~~~te~~~~ 159 (385)
T 4hwg_A 88 EVLEKEKP--DAVLFYGDTNSCLS-AIAAKRRKIPIF-HMEAGNRCFD----QRVPEEINRKIIDHISDVNITLTEHARR 159 (385)
T ss_dssp HHHHHHCC--SEEEEESCSGGGGG-HHHHHHTTCCEE-EESCCCCCSC----TTSTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHhcCC--cEEEEECCchHHHH-HHHHHHhCCCEE-EEeCCCcccc----ccCcHHHHHHHHHhhhceeecCCHHHHH
Confidence 34466788 89999986655556 555555678875 3444432211 133445555543 37888778888888
Q ss_pred HHHHHHHhhhCccccccCceeeEEECCeEEEEEEec-cccCchHHHhhhCCchHHHHHHHHHHHcC---CCEEEEEecCc
Q 003042 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILP-VGIHMGQFESIMSLDVTGQKVKELKEKFD---GKIVILGVDDM 335 (854)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p-~GId~~~~~~~~~~~~~~~~~~~l~~~~~---~~~iil~VdRl 335 (854)
+|.+ .|+.. + +|.+.+ +++|.-.+... .....+++++++ ++.+++..+|.
T Consensus 160 ~l~~-----~G~~~--~-------------~I~vtGnp~~D~~~~~~~------~~~~~~~~~~lgl~~~~~iLvt~hr~ 213 (385)
T 4hwg_A 160 YLIA-----EGLPA--E-------------LTFKSGSHMPEVLDRFMP------KILKSDILDKLSLTPKQYFLISSHRE 213 (385)
T ss_dssp HHHH-----TTCCG--G-------------GEEECCCSHHHHHHHHHH------HHHHCCHHHHTTCCTTSEEEEEECCC
T ss_pred HHHH-----cCCCc--C-------------cEEEECCchHHHHHHhhh------hcchhHHHHHcCCCcCCEEEEEeCCc
Confidence 7765 24331 1 122222 35664332110 011234555552 45567778885
Q ss_pred c---ccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHH-hhccCCCCCccEEEEcCCC
Q 003042 336 D---LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEI-NLNFGKPGYEPIVIIKEPL 411 (854)
Q Consensus 336 d---~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~I-n~~~~~~~~~pv~~~~~~~ 411 (854)
. ..|++..+++|++++.+++ +++ +|.... +. +++.++ +. +. .+ .. +-+.+.+++
T Consensus 214 e~~~~~~~l~~ll~al~~l~~~~-~~~----vv~p~~------p~---~~~~l~----~~~~~-~~--~~-~~v~l~~~l 271 (385)
T 4hwg_A 214 ENVDVKNNLKELLNSLQMLIKEY-NFL----IIFSTH------PR---TKKRLE----DLEGF-KE--LG-DKIRFLPAF 271 (385)
T ss_dssp -----CHHHHHHHHHHHHHHHHH-CCE----EEEEEC------HH---HHHHHH----TSGGG-GG--TG-GGEEECCCC
T ss_pred hhcCcHHHHHHHHHHHHHHHhcC-CeE----EEEECC------hH---HHHHHH----HHHHH-hc--CC-CCEEEEcCC
Confidence 4 4478999999999998766 443 333221 22 222222 21 10 10 11 234466678
Q ss_pred ChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecC-ccccccC--CCceEe
Q 003042 412 STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF-IGCSPSL--SGAIRV 488 (854)
Q Consensus 412 ~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l--~~ai~v 488 (854)
+..++..+|+.||+++..| |.+..||++++. |+|+... ++..+.+ ..+++|
T Consensus 272 g~~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~---------------------Pvv~~~~~ter~e~v~~G~~~lv 325 (385)
T 4hwg_A 272 SFTDYVKLQMNAFCILSDS-----GTITEEASILNL---------------------PALNIREAHERPEGMDAGTLIMS 325 (385)
T ss_dssp CHHHHHHHHHHCSEEEECC-----TTHHHHHHHTTC---------------------CEEECSSSCSCTHHHHHTCCEEC
T ss_pred CHHHHHHHHHhCcEEEECC-----ccHHHHHHHcCC---------------------CEEEcCCCccchhhhhcCceEEc
Confidence 8889999999999999777 446799999943 5555433 3333334 335666
Q ss_pred CCCCHHHHHHHHHHHhcCCH
Q 003042 489 NPWNVDAVADAMDSALQMEN 508 (854)
Q Consensus 489 nP~d~~~~A~ai~~aL~m~~ 508 (854)
.+ |.+++++++.++|+.+.
T Consensus 326 ~~-d~~~i~~ai~~ll~d~~ 344 (385)
T 4hwg_A 326 GF-KAERVLQAVKTITEEHD 344 (385)
T ss_dssp CS-SHHHHHHHHHHHHTTCB
T ss_pred CC-CHHHHHHHHHHHHhChH
Confidence 54 89999999999998764
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=98.60 E-value=4.4e-08 Score=91.64 Aligned_cols=51 Identities=14% Similarity=0.113 Sum_probs=43.1
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhh
Q 003042 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~ 640 (854)
+|+|+||+||||.+ ...+.+.+.++|++| ++.|++++|+|+++...+...+
T Consensus 2 ~k~i~~D~DgtL~~----~~~~~~~~~~~l~~L-~~~G~~~~i~S~~~~~~~~~~l 52 (137)
T 2pr7_A 2 MRGLIVDYAGVLDG----TDEDQRRWRNLLAAA-KKNGVGTVILSNDPGGLGAAPI 52 (137)
T ss_dssp CCEEEECSTTTTSS----CHHHHHHHHHHHHHH-HHTTCEEEEEECSCCGGGGHHH
T ss_pred CcEEEEeccceecC----CCccCccHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHH
Confidence 58999999999954 445678899999999 7889999999999887766655
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.51 E-value=7.5e-08 Score=101.40 Aligned_cols=78 Identities=13% Similarity=0.082 Sum_probs=62.4
Q ss_pred CCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC-------cccceE
Q 003042 748 QGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFACTVGQKP-------SMAKYY 819 (854)
Q Consensus 748 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~-------s~A~y~ 819 (854)
.+-.|..+++.+++++ |++++++++|||+. ||+.|++.+|.. ++.|..|... ..|+|+
T Consensus 159 ~~Kp~~~~~~~~~~~~---g~~~~~~~~vGD~~~~Di~~a~~aG~~-----------~i~~~~~~~~~~~~~~~~~ad~v 224 (263)
T 3k1z_A 159 WPKPDPRIFQEALRLA---HMEPVVAAHVGDNYLCDYQGPRAVGMH-----------SFLVVGPQALDPVVRDSVPKEHI 224 (263)
T ss_dssp SCTTSHHHHHHHHHHH---TCCGGGEEEEESCHHHHTHHHHTTTCE-----------EEEECCSSCCCHHHHHHSCGGGE
T ss_pred CCCCCHHHHHHHHHHc---CCCHHHEEEECCCcHHHHHHHHHCCCE-----------EEEEcCCCCCchhhcccCCCceE
Confidence 3445788999999999 99999999999996 999999999973 3455555432 269999
Q ss_pred eCCHhHHHHHHHHHHhccCC
Q 003042 820 LDDTAEVINLLEGLATESVH 839 (854)
Q Consensus 820 l~~~~eV~~~L~~l~~~~~~ 839 (854)
+++..++.++|..+.+.+..
T Consensus 225 ~~~l~el~~~l~~~~~~~~~ 244 (263)
T 3k1z_A 225 LPSLAHLLPALDCLEGSAEN 244 (263)
T ss_dssp ESSGGGHHHHHHHHHHC---
T ss_pred eCCHHHHHHHHHHHHhcCCC
Confidence 99999999999998766544
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.50 E-value=6.2e-08 Score=92.05 Aligned_cols=59 Identities=22% Similarity=0.303 Sum_probs=44.8
Q ss_pred cCCeEEEEecCCCCCCCCC-CCCCCCHHHHHHHHHcccCCCCeEEEEcCCC---ccchhhhhcC
Q 003042 583 TNSRLILLDYDGTVMPQTS-EDKRPSTEVLSILNDLCNDPKNAVFIVSGRG---KDSLGNWFSG 642 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~-~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~---~~~l~~~~~~ 642 (854)
|.+|+|++|+||||++... ....+.+.++++|+++ ++.|+.|+|+|||+ ...+..++..
T Consensus 1 m~~k~i~~DlDGTL~~~~~~~i~~~~~~~~~al~~l-~~~G~~iii~TgR~~~~~~~~~~~l~~ 63 (142)
T 2obb_A 1 SNAMTIAVDFDGTIVEHRYPRIGEEIPFAVETLKLL-QQEKHRLILWSVREGELLDEAIEWCRA 63 (142)
T ss_dssp -CCCEEEECCBTTTBCSCTTSCCCBCTTHHHHHHHH-HHTTCEEEECCSCCHHHHHHHHHHHHT
T ss_pred CCCeEEEEECcCCCCCCCCccccccCHHHHHHHHHH-HHCCCEEEEEeCCCcccHHHHHHHHHH
Confidence 4578999999999999321 1113457899999999 89999999999998 4556666643
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.49 E-value=3.2e-07 Score=94.08 Aligned_cols=40 Identities=18% Similarity=0.218 Sum_probs=36.3
Q ss_pred CcchHHHHHHHHHHHhhCC---CCCCeEEEEeCCcccHHHHHHhhh
Q 003042 749 GVSKGIVVKNLISTMRSRG---KSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 749 gvsKg~al~~ll~~l~~~g---i~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+..|...++.+++.+ | ++++++++||||.||++|++.+|.
T Consensus 157 ~~~K~~~~~~~~~~~---~~~~~~~~~~~~vGDs~~D~~~~~~ag~ 199 (232)
T 3fvv_A 157 REGKVVRVNQWLAGM---GLALGDFAESYFYSDSVNDVPLLEAVTR 199 (232)
T ss_dssp THHHHHHHHHHHHHT---TCCGGGSSEEEEEECCGGGHHHHHHSSE
T ss_pred chHHHHHHHHHHHHc---CCCcCchhheEEEeCCHhhHHHHHhCCC
Confidence 456888899999988 8 899999999999999999999986
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=4.3e-07 Score=99.58 Aligned_cols=247 Identities=12% Similarity=0.059 Sum_probs=147.6
Q ss_pred HHHhcCCCCCeEEEeCcccc--hHH-HHHHhc-cCCCeEEEEecCCCCChhhhhcCCC-hHHHHHHhhcCCeEeecCHHH
Q 003042 183 VMEVINPDEDYVWIHDYHLM--VLP-SFLRKR-FHRVKVGFFLHSPFPSSEIYRTLPV-RDEILKSLLNSDLIGFHTFDY 257 (854)
Q Consensus 183 i~~~~~~~~D~vwihDyhl~--llp-~~lr~~-~~~~~i~~flH~pfP~~e~~~~lp~-r~eil~~ll~~dligf~t~~~ 257 (854)
+...+++ +|+|.+|-..+. ..+ .++++. ..++|+.++.|.-||-.-. .-+. ...-...+-.||.|..++...
T Consensus 68 ~~~~~~~-~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~~--~~~~~~~~E~~~y~~aD~Ii~~S~~~ 144 (339)
T 3rhz_A 68 IVAGLRH-GDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMFS--GNFYLMDRTIAYYNKADVVVAPSQKM 144 (339)
T ss_dssp HTTTCCT-TCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHCG--GGGGGHHHHHHHHTTCSEEEESCHHH
T ss_pred HHhcCCC-CCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhCc--cchhhHHHHHHHHHHCCEEEECCHHH
Confidence 5555665 599999866542 222 233331 2389999999988773211 0001 111122345699999999877
Q ss_pred HHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEecccc-CchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCcc
Q 003042 258 ARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGI-HMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMD 336 (854)
Q Consensus 258 ~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GI-d~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld 336 (854)
.+.+.+ .|+.. .++ .+.++ |... ..+. ....++++|+++||+.
T Consensus 145 ~~~l~~-----~G~~~---------------~ki--~~~~~~~~~~-----~~~~---------~~~~~~~~i~yaG~l~ 188 (339)
T 3rhz_A 145 IDKLRD-----FGMNV---------------SKT--VVQGMWDHPT-----QAPM---------FPAGLKREIHFPGNPE 188 (339)
T ss_dssp HHHHHH-----TTCCC---------------SEE--EECCSCCCCC-----CCCC---------CCCEEEEEEEECSCTT
T ss_pred HHHHHH-----cCCCc---------------Cce--eecCCCCccC-----cccc---------cccCCCcEEEEeCCcc
Confidence 666543 13220 112 22232 1110 0000 0113467899999999
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhH
Q 003042 337 LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDK 416 (854)
Q Consensus 337 ~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el 416 (854)
...++. + + .|+++ |+++|... +. + .. .|. +.|.+|.+|+
T Consensus 189 k~~~L~----~---l---~~~~~----f~ivG~G~-----~~----------------~---l~--nV~-f~G~~~~~el 227 (339)
T 3rhz_A 189 RFSFVK----E---W---KYDIP----LKVYTWQN-----VE----------------L---PQ--NVH-KINYRPDEQL 227 (339)
T ss_dssp TCGGGG----G---C---CCSSC----EEEEESCC-----CC----------------C---CT--TEE-EEECCCHHHH
T ss_pred hhhHHH----h---C---CCCCe----EEEEeCCc-----cc----------------C---cC--CEE-EeCCCCHHHH
Confidence 532221 1 1 46665 88888533 10 0 11 254 4568999999
Q ss_pred HHHHHhCcEEEEccCccC---------CCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccC---CC
Q 003042 417 VPYYAIAECCVVNCVRDG---------MNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSL---SG 484 (854)
Q Consensus 417 ~aly~~ADv~vv~S~~EG---------~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~ 484 (854)
+.+|+.||+.++. .+| ++....||||| |.|+|++..++..+.+ ..
T Consensus 228 ~~~l~~~~~~lv~--~~~~~~~y~~~~~P~Kl~eymA~---------------------G~PVI~~~~~~~~~~v~~~~~ 284 (339)
T 3rhz_A 228 LMEMSQGGFGLVW--MDDKDKEYQSLYCSYKLGSFLAA---------------------GIPVIVQEGIANQELIENNGL 284 (339)
T ss_dssp HHHHHTEEEEECC--CCGGGHHHHTTCCCHHHHHHHHH---------------------TCCEEEETTCTTTHHHHHHTC
T ss_pred HHHHHhCCEEEEE--CCCchhHHHHhcChHHHHHHHHc---------------------CCCEEEccChhHHHHHHhCCe
Confidence 9999999998887 233 46678999999 4599999988887777 23
Q ss_pred ceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHH
Q 003042 485 AIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQD 537 (854)
Q Consensus 485 ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 537 (854)
|+.++ +.++++++|.. +.+++++.+.+..+++..+.+..+..++-+.+
T Consensus 285 G~~~~--~~~e~~~~i~~---l~~~~~~~m~~na~~~a~~~~~~~f~k~~l~~ 332 (339)
T 3rhz_A 285 GWIVK--DVEEAIMKVKN---VNEDEYIELVKNVRSFNPILRKGFFTRRLLTE 332 (339)
T ss_dssp EEEES--SHHHHHHHHHH---CCHHHHHHHHHHHHHHTHHHHTTHHHHHHHHH
T ss_pred EEEeC--CHHHHHHHHHH---hCHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 78776 57888888876 45666666666666665555555555554443
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.46 E-value=4.1e-07 Score=99.55 Aligned_cols=72 Identities=14% Similarity=0.144 Sum_probs=58.9
Q ss_pred CcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC---CcccceEe--CCH
Q 003042 749 GVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK---PSMAKYYL--DDT 823 (854)
Q Consensus 749 gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~---~s~A~y~l--~~~ 823 (854)
+..|+.+++.+++++ |++++++++|||+.||++|++.+|. +|++... +..|++++ ++.
T Consensus 243 ~kpk~~~~~~~~~~l---gi~~~~~v~vGDs~nDi~~a~~aG~--------------~va~~~~~~~~~~a~~v~~~~~l 305 (335)
T 3n28_A 243 AQTKADILLTLAQQY---DVEIHNTVAVGDGANDLVMMAAAGL--------------GVAYHAKPKVEAKAQTAVRFAGL 305 (335)
T ss_dssp HHHHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEEESCCHHHHTTSSEEESSSCT
T ss_pred hhhhHHHHHHHHHHc---CCChhhEEEEeCCHHHHHHHHHCCC--------------eEEeCCCHHHHhhCCEEEecCCH
Confidence 347999999999999 9999999999999999999999996 4555322 46788876 467
Q ss_pred hHHHHHHHHHHhcc
Q 003042 824 AEVINLLEGLATES 837 (854)
Q Consensus 824 ~eV~~~L~~l~~~~ 837 (854)
++|+.+|+......
T Consensus 306 ~~v~~~L~~~l~~~ 319 (335)
T 3n28_A 306 GGVVCILSAALVAQ 319 (335)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHhHHHHh
Confidence 89999998876543
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.46 E-value=2.4e-08 Score=104.51 Aligned_cols=67 Identities=16% Similarity=0.206 Sum_probs=55.1
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC--CcccceEeCCHhHH-HH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK--PSMAKYYLDDTAEV-IN 828 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~--~s~A~y~l~~~~eV-~~ 828 (854)
+......+++++ |++|+++++|||+.+|+.+.+.+|. .+|.+++. ...|+|++++..|+ .+
T Consensus 172 ~p~~~~~a~~~l---g~~p~e~l~VGDs~~Di~aA~~aG~-------------~~i~v~~~~~~~~ad~vi~~l~eL~~~ 235 (250)
T 4gib_A 172 HPEIFLMSAKGL---NVNPQNCIGIEDASAGIDAINSANM-------------FSVGVGNYENLKKANLVVDSTNQLKFE 235 (250)
T ss_dssp SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTC-------------EEEEESCTTTTTTSSEEESSGGGCCHH
T ss_pred cHHHHHHHHHHh---CCChHHeEEECCCHHHHHHHHHcCC-------------EEEEECChhHhccCCEEECChHhCCHH
Confidence 567889999999 9999999999999999999999997 35556643 46799999999887 56
Q ss_pred HHHHHH
Q 003042 829 LLEGLA 834 (854)
Q Consensus 829 ~L~~l~ 834 (854)
.|++..
T Consensus 236 ~i~~~~ 241 (250)
T 4gib_A 236 YIQEKY 241 (250)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665544
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=98.42 E-value=5.4e-08 Score=98.73 Aligned_cols=70 Identities=13% Similarity=0.205 Sum_probs=55.6
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC-----cccceEeCCHhHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP-----SMAKYYLDDTAEV 826 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~-----s~A~y~l~~~~eV 826 (854)
+....+.+++++ |++|+++++|||+.+|+.+.+.+|.. .+++|..|..+ .....++.+++++
T Consensus 142 ~p~~~~~a~~~l---g~~p~e~l~VgDs~~Di~aA~~aG~~----------~i~~v~~g~~~~~~l~~~~~~~i~~~~el 208 (216)
T 3kbb_A 142 DPEIYLLVLERL---NVVPEKVVVFEDSKSGVEAAKSAGIE----------RIYGVVHSLNDGKALLEAGAVALVKPEEI 208 (216)
T ss_dssp STHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHHHTTCC----------CEEEECCSSSCCHHHHHTTCSEEECGGGH
T ss_pred cHHHHHHHHHhh---CCCccceEEEecCHHHHHHHHHcCCc----------EEEEecCCCCCHHHHHhCCCcEECCHHHH
Confidence 567899999999 99999999999999999999999974 34577877542 2223445578999
Q ss_pred HHHHHHHH
Q 003042 827 INLLEGLA 834 (854)
Q Consensus 827 ~~~L~~l~ 834 (854)
++.|+.|+
T Consensus 209 i~~l~eLL 216 (216)
T 3kbb_A 209 LNVLKEVL 216 (216)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHC
Confidence 99998763
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.40 E-value=2.6e-07 Score=100.43 Aligned_cols=63 Identities=14% Similarity=0.199 Sum_probs=50.4
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC---CcccceEeC--CHhH
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK---PSMAKYYLD--DTAE 825 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~---~s~A~y~l~--~~~e 825 (854)
.|..+++.+++.+ |++++++++|||+.||++|++.+|. +|.++.. ...|++++. +..+
T Consensus 246 pkp~~~~~~~~~l---gv~~~~~i~VGDs~~Di~aa~~AG~--------------~va~~~~~~~~~~a~~~i~~~~L~~ 308 (317)
T 4eze_A 246 NKKQTLVDLAARL---NIATENIIACGDGANDLPMLEHAGT--------------GIAWKAKPVVREKIHHQINYHGFEL 308 (317)
T ss_dssp HHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEEESCCHHHHHHCCEEESSSCGGG
T ss_pred CCHHHHHHHHHHc---CCCcceEEEEeCCHHHHHHHHHCCC--------------eEEeCCCHHHHHhcCeeeCCCCHHH
Confidence 5889999999999 9999999999999999999999985 5666543 246677664 5666
Q ss_pred HHHHH
Q 003042 826 VINLL 830 (854)
Q Consensus 826 V~~~L 830 (854)
++.+|
T Consensus 309 ll~~L 313 (317)
T 4eze_A 309 LLFLI 313 (317)
T ss_dssp GGGGT
T ss_pred HHHHH
Confidence 66554
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=98.37 E-value=1.9e-06 Score=91.69 Aligned_cols=52 Identities=15% Similarity=0.266 Sum_probs=42.5
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcC---CCccchhhhh
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSG---RGKDSLGNWF 640 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TG---R~~~~l~~~~ 640 (854)
++|+|+||+||||++ ... +.+.+.++|+++ ++.|+.++++|| |+...+...+
T Consensus 13 ~~k~i~~D~DGtL~~---~~~-~~~~~~~~l~~l-~~~g~~~~~~Tn~~~r~~~~~~~~l 67 (284)
T 2hx1_A 13 KYKCIFFDAFGVLKT---YNG-LLPGIENTFDYL-KAQGQDYYIVTNDASRSPEQLADSY 67 (284)
T ss_dssp GCSEEEECSBTTTEE---TTE-ECTTHHHHHHHH-HHTTCEEEEEECCCSSCHHHHHHHH
T ss_pred cCCEEEEcCcCCcCc---CCe-eChhHHHHHHHH-HHCCCEEEEEeCCCCcCHHHHHHHH
Confidence 579999999999998 433 457889999999 889999999996 6666655555
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.34 E-value=8.7e-07 Score=100.04 Aligned_cols=66 Identities=20% Similarity=0.255 Sum_probs=54.0
Q ss_pred CcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC---CcccceEeC--CH
Q 003042 749 GVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK---PSMAKYYLD--DT 823 (854)
Q Consensus 749 gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~---~s~A~y~l~--~~ 823 (854)
+..|..+++.+++.+ |++++++++|||+.||++|++.+|. +|+++.+ +..|+++++ +.
T Consensus 321 ~kpk~~~~~~~~~~~---gi~~~~~i~vGD~~~Di~~a~~aG~--------------~va~~~~~~~~~~ad~~i~~~~l 383 (415)
T 3p96_A 321 RAGKATALREFAQRA---GVPMAQTVAVGDGANDIDMLAAAGL--------------GIAFNAKPALREVADASLSHPYL 383 (415)
T ss_dssp HHHHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEEESCCHHHHHHCSEEECSSCT
T ss_pred CcchHHHHHHHHHHc---CcChhhEEEEECCHHHHHHHHHCCC--------------eEEECCCHHHHHhCCEEEccCCH
Confidence 446999999999999 9999999999999999999999986 4556443 367888875 56
Q ss_pred hHHHHHHH
Q 003042 824 AEVINLLE 831 (854)
Q Consensus 824 ~eV~~~L~ 831 (854)
++++.+|.
T Consensus 384 ~~ll~~l~ 391 (415)
T 3p96_A 384 DTVLFLLG 391 (415)
T ss_dssp THHHHHTT
T ss_pred HHHHHHhC
Confidence 77777663
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=98.30 E-value=1.1e-06 Score=94.05 Aligned_cols=141 Identities=14% Similarity=0.183 Sum_probs=100.6
Q ss_pred HHHHHHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecC
Q 003042 573 MHHIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEH 652 (854)
Q Consensus 573 ~~~i~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaen 652 (854)
++.....|.....+++++|+|+++...-.....+.+.+.++|+.| ++.|++++|+||++...+..++. .+++.
T Consensus 131 ~~~~~~~~~~~g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~l~~L-~~~g~~~~i~T~~~~~~~~~~l~---~~gl~--- 203 (287)
T 3a1c_A 131 VELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQEL-KRMGIKVGMITGDNWRSAEAISR---ELNLD--- 203 (287)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHH---HHTCS---
T ss_pred HHHHHHHHHhCCCeEEEEEECCEEEEEEEeccccchhHHHHHHHH-HHCCCeEEEEeCCCHHHHHHHHH---HhCCc---
Confidence 345566777777899999999997641112345678899999999 88899999999999887777663 22220
Q ss_pred cEEEEECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCC
Q 003042 653 GYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANE 732 (854)
Q Consensus 653 G~~I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~ 732 (854)
. .+..+
T Consensus 204 ----------------------------------------~-----------~f~~i----------------------- 209 (287)
T 3a1c_A 204 ----------------------------------------L-----------VIAEV----------------------- 209 (287)
T ss_dssp ----------------------------------------E-----------EECSC-----------------------
T ss_pred ----------------------------------------e-----------eeeec-----------------------
Confidence 0 00000
Q ss_pred CEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC
Q 003042 733 PVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK 812 (854)
Q Consensus 733 ~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~ 812 (854)
.| .+|..+ ++.+ +.. +++++|||+.||+.|++.+|. +|++|+.
T Consensus 210 -------------~~--~~K~~~----~~~l---~~~-~~~~~vGDs~~Di~~a~~ag~--------------~v~~~~~ 252 (287)
T 3a1c_A 210 -------------LP--HQKSEE----VKKL---QAK-EVVAFVGDGINDAPALAQADL--------------GIAVGSG 252 (287)
T ss_dssp -------------CT--TCHHHH----HHHH---TTT-CCEEEEECTTTCHHHHHHSSE--------------EEEECCC
T ss_pred -------------Ch--HHHHHH----HHHH---hcC-CeEEEEECCHHHHHHHHHCCe--------------eEEeCCC
Confidence 01 246444 4455 677 999999999999999999985 4666653
Q ss_pred ----CcccceEe--CCHhHHHHHHH
Q 003042 813 ----PSMAKYYL--DDTAEVINLLE 831 (854)
Q Consensus 813 ----~s~A~y~l--~~~~eV~~~L~ 831 (854)
...|++++ ++..++.++|.
T Consensus 253 ~~~~~~~ad~v~~~~~~~~l~~~l~ 277 (287)
T 3a1c_A 253 SDVAVESGDIVLIRDDLRDVVAAIQ 277 (287)
T ss_dssp SCCSSCCSSEEESSSCTHHHHHHHH
T ss_pred CHHHHhhCCEEEeCCCHHHHHHHHH
Confidence 35689999 88999888775
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.23 E-value=7.6e-07 Score=90.86 Aligned_cols=62 Identities=27% Similarity=0.392 Sum_probs=48.5
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC------cccceEeCCHh
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP------SMAKYYLDDTA 824 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~------s~A~y~l~~~~ 824 (854)
.|..+++.+++.+ |+ +++++|||+.||+.+.+.+|. +|.+|... ..|++++++..
T Consensus 157 ~Kp~~~~~~~~~~---~~--~~~~~vGDs~~Di~~a~~ag~--------------~i~~~~~~~~~~~~~~~~~~~~~~~ 217 (225)
T 1nnl_A 157 GKGKVIKLLKEKF---HF--KKIIMIGDGATDMEACPPADA--------------FIGFGGNVIRQQVKDNAKWYITDFV 217 (225)
T ss_dssp HHHHHHHHHHHHH---CC--SCEEEEESSHHHHTTTTTSSE--------------EEEECSSCCCHHHHHHCSEEESCGG
T ss_pred chHHHHHHHHHHc---CC--CcEEEEeCcHHhHHHHHhCCe--------------EEEecCccccHHHHhcCCeeecCHH
Confidence 5888999999988 77 789999999999999998874 56666431 35889999988
Q ss_pred HHHHHHH
Q 003042 825 EVINLLE 831 (854)
Q Consensus 825 eV~~~L~ 831 (854)
++.++|.
T Consensus 218 el~~~l~ 224 (225)
T 1nnl_A 218 ELLGELE 224 (225)
T ss_dssp GGCC---
T ss_pred HHHHHHh
Confidence 8776653
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.21 E-value=9.6e-07 Score=105.06 Aligned_cols=138 Identities=19% Similarity=0.233 Sum_probs=101.3
Q ss_pred HHHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEE
Q 003042 576 IASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYF 655 (854)
Q Consensus 576 i~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~ 655 (854)
..+.+.....+.+++..||+++..-.....+.+++.++|++| ++.|++++++||+.......+.. .+++.
T Consensus 428 ~~~~~~~~g~~~l~va~~~~~~G~i~~~D~l~~~~~~~i~~L-~~~Gi~v~~~TGd~~~~a~~ia~---~lgi~------ 497 (645)
T 3j08_A 428 ALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQEL-KRMGIKVGMITGDNWRSAEAISR---ELNLD------ 497 (645)
T ss_dssp HHHHHHTTTCCCEEEEETTEEEEEEEEECCCTTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHH---HHTCS------
T ss_pred HHHHHHhcCCeEEEEEECCEEEEEEEecCCchhHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHH---HcCCC------
Confidence 344555566788999999998742113456788999999999 89999999999999888887763 33321
Q ss_pred EEECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEE
Q 003042 656 TRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVV 735 (854)
Q Consensus 656 I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~ 735 (854)
.
T Consensus 498 ------------------------------------------------~------------------------------- 498 (645)
T 3j08_A 498 ------------------------------------------------L------------------------------- 498 (645)
T ss_dssp ------------------------------------------------E-------------------------------
T ss_pred ------------------------------------------------E-------------------------------
Confidence 0
Q ss_pred EEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC---
Q 003042 736 VKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK--- 812 (854)
Q Consensus 736 v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~--- 812 (854)
.+.++.| .+|+.+++.+.+ . +.++++||+.||.+|++.++. +|++|+.
T Consensus 499 -----~~~~~~P--~~K~~~v~~l~~-----~---~~v~~vGDg~ND~~al~~A~v--------------giamg~g~~~ 549 (645)
T 3j08_A 499 -----VIAEVLP--HQKSEEVKKLQA-----K---EVVAFVGDGINDAPALAQADL--------------GIAVGSGSDV 549 (645)
T ss_dssp -----EECSCCT--TCHHHHHHHHTT-----T---CCEEEEECSSSCHHHHHHSSE--------------EEEECCCSCC
T ss_pred -----EEEeCCH--HhHHHHHHHHhh-----C---CeEEEEeCCHhHHHHHHhCCE--------------EEEeCCCcHH
Confidence 0011112 268888887743 2 789999999999999999984 7888864
Q ss_pred -CcccceEe--CCHhHHHHHHH
Q 003042 813 -PSMAKYYL--DDTAEVINLLE 831 (854)
Q Consensus 813 -~s~A~y~l--~~~~eV~~~L~ 831 (854)
+..|++++ ++.+++.+.++
T Consensus 550 a~~~AD~vl~~~~~~~i~~~i~ 571 (645)
T 3j08_A 550 AVESGDIVLIRDDLRDVVAAIQ 571 (645)
T ss_dssp SSCCSSSEESSCCTTHHHHHHH
T ss_pred HHHhCCEEEecCCHHHHHHHHH
Confidence 57899998 67788877775
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.21 E-value=8e-07 Score=88.76 Aligned_cols=38 Identities=5% Similarity=0.072 Sum_probs=35.1
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
.+...++.+++.+ |++++++++|||+.||+.|++.+|.
T Consensus 142 p~~~~~~~~~~~~---~~~~~~~~~vgD~~~Di~~a~~aG~ 179 (200)
T 3cnh_A 142 PNPAMYRLGLTLA---QVRPEEAVMVDDRLQNVQAARAVGM 179 (200)
T ss_dssp TCHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHc---CCCHHHeEEeCCCHHHHHHHHHCCC
Confidence 3567899999999 9999999999999999999999997
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=98.20 E-value=7.5e-08 Score=95.29 Aligned_cols=40 Identities=18% Similarity=-0.011 Sum_probs=36.1
Q ss_pred eCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 747 PQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 747 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+.+..|+.+++.+++++ |++ ++++|||+.||++|++.+|.
T Consensus 134 ~~~kp~~~~~~~~~~~~---~~~--~~~~iGD~~~Di~~a~~aG~ 173 (190)
T 2fi1_A 134 FKRKPNPESMLYLREKY---QIS--SGLVIGDRPIDIEAGQAAGL 173 (190)
T ss_dssp CCCTTSCHHHHHHHHHT---TCS--SEEEEESSHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHc---CCC--eEEEEcCCHHHHHHHHHcCC
Confidence 34566899999999999 887 89999999999999999997
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.20 E-value=9.5e-07 Score=91.87 Aligned_cols=67 Identities=15% Similarity=0.212 Sum_probs=51.2
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCCcccceEeCCHh-----HH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTA-----EV 826 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~s~A~y~l~~~~-----eV 826 (854)
+......+++++ |++|+++++|||+.+|+.+.+.+|.. +|.|+...+.|+..+++.. .+
T Consensus 151 ~p~~~~~a~~~l---g~~p~e~l~VgDs~~di~aA~~aG~~-------------~I~V~~g~~~ad~~~~~~~~l~~~~l 214 (243)
T 4g9b_A 151 DPEIFLAACAGL---GVPPQACIGIEDAQAGIDAINASGMR-------------SVGIGAGLTGAQLLLPSTESLTWPRL 214 (243)
T ss_dssp STHHHHHHHHHH---TSCGGGEEEEESSHHHHHHHHHHTCE-------------EEEESTTCCSCSEEESSGGGCCHHHH
T ss_pred cHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHcCCE-------------EEEECCCCCcHHHhcCChhhcCHHHH
Confidence 467888999999 99999999999999999999999973 5556655667777776543 34
Q ss_pred HHHHHHHH
Q 003042 827 INLLEGLA 834 (854)
Q Consensus 827 ~~~L~~l~ 834 (854)
.++++.+.
T Consensus 215 ~~~~~~l~ 222 (243)
T 4g9b_A 215 SAFWQNVA 222 (243)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHH
Confidence 44444443
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=98.19 E-value=1e-06 Score=82.12 Aligned_cols=47 Identities=19% Similarity=0.393 Sum_probs=41.1
Q ss_pred CeEEEEecCCCCCCCCCCCC------CCCHHHHHHHHHcccCCCCeEEEEcCCCccc
Q 003042 585 SRLILLDYDGTVMPQTSEDK------RPSTEVLSILNDLCNDPKNAVFIVSGRGKDS 635 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~------~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~ 635 (854)
+|+|+||+||||++ ... .+++.+.++|+++ +++|+.++++|||+...
T Consensus 1 ik~i~~DlDGTL~~---~~~~~~~~~~~~~~~~~~l~~l-~~~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQ---ANTSDYRNVLPRLDVIEQLREY-HQLGFEIVISTARNMRT 53 (126)
T ss_dssp CCEEEECSTTTTBC---CCCSCGGGCCBCHHHHHHHHHH-HHTTCEEEEEECTTTTT
T ss_pred CCEEEEecCCCCCC---CCCCccccCCCCHHHHHHHHHH-HhCCCeEEEEeCCChhh
Confidence 48999999999998 443 5779999999999 88999999999998654
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.16 E-value=4.4e-06 Score=83.86 Aligned_cols=69 Identities=12% Similarity=0.070 Sum_probs=49.3
Q ss_pred eeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC----cccceE-e
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP----SMAKYY-L 820 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~----s~A~y~-l 820 (854)
+|+...|..+++. + +..++++++|||+.||+.|++.+|. ++.++..+ ..+.++ +
T Consensus 128 ~p~p~~~~~~l~~----l---~~~~~~~~~iGD~~~Di~~a~~aG~--------------~~~~~~~~~~~~~~~~~~~~ 186 (206)
T 1rku_A 128 LRQKDPKRQSVIA----F---KSLYYRVIAAGDSYNDTTMLSEAHA--------------GILFHAPENVIREFPQFPAV 186 (206)
T ss_dssp CCSSSHHHHHHHH----H---HHTTCEEEEEECSSTTHHHHHHSSE--------------EEEESCCHHHHHHCTTSCEE
T ss_pred cCCCchHHHHHHH----H---HhcCCEEEEEeCChhhHHHHHhcCc--------------cEEECCcHHHHHHHhhhccc
Confidence 4655556555544 4 5568899999999999999999986 34444321 234453 8
Q ss_pred CCHhHHHHHHHHHHh
Q 003042 821 DDTAEVINLLEGLAT 835 (854)
Q Consensus 821 ~~~~eV~~~L~~l~~ 835 (854)
++..++.++|+.+..
T Consensus 187 ~~~~~l~~~l~~~~~ 201 (206)
T 1rku_A 187 HTYEDLKREFLKASS 201 (206)
T ss_dssp CSHHHHHHHHHHHCS
T ss_pred cchHHHHHHHHHHhc
Confidence 899999999987754
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=98.16 E-value=4.8e-07 Score=90.61 Aligned_cols=37 Identities=11% Similarity=0.209 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+..+++.+++++ |++++++++|||+.||+.|++.+|.
T Consensus 150 ~~~~~~~~~~~~---~~~~~~~~~vgD~~~Di~~a~~aG~ 186 (206)
T 2b0c_A 150 EARIYQHVLQAE---GFSPSDTVFFDDNADNIEGANQLGI 186 (206)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred CHHHHHHHHHHc---CCCHHHeEEeCCCHHHHHHHHHcCC
Confidence 355889999999 9999999999999999999999997
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.13 E-value=2.3e-06 Score=103.25 Aligned_cols=139 Identities=18% Similarity=0.221 Sum_probs=102.3
Q ss_pred HHHHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcE
Q 003042 575 HIASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGY 654 (854)
Q Consensus 575 ~i~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~ 654 (854)
...+.+.....+.+++..||+++..-.....+.+++.++|++| ++.|++++++||+.......+.. .+++.
T Consensus 505 ~~~~~~~~~g~~~~~va~~~~~~G~i~i~D~~~~~~~~~i~~l-~~~Gi~v~~~TGd~~~~a~~ia~---~lgi~----- 575 (723)
T 3j09_A 505 LALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQEL-KRMGIKVGMITGDNWRSAEAISR---ELNLD----- 575 (723)
T ss_dssp HHHHHHHTTTCEEEEEEETTEEEEEEEEECCSCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHH---HHTCS-----
T ss_pred HHHHHHHhcCCeEEEEEECCEEEEEEeecCCcchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHH---HcCCc-----
Confidence 3445556667899999999998742113456788999999999 89999999999999888877763 33321
Q ss_pred EEEECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCE
Q 003042 655 FTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPV 734 (854)
Q Consensus 655 ~I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~ 734 (854)
..+
T Consensus 576 -------------------------------------------------~~~---------------------------- 578 (723)
T 3j09_A 576 -------------------------------------------------LVI---------------------------- 578 (723)
T ss_dssp -------------------------------------------------EEE----------------------------
T ss_pred -------------------------------------------------EEE----------------------------
Confidence 000
Q ss_pred EEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC--
Q 003042 735 VVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK-- 812 (854)
Q Consensus 735 ~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~-- 812 (854)
.++.| .+|+.+++.+.+ . +.++++||+.||.+|++.++ ++|++|+.
T Consensus 579 --------~~~~P--~~K~~~v~~l~~-----~---~~v~~vGDg~ND~~al~~A~--------------vgiamg~g~~ 626 (723)
T 3j09_A 579 --------AEVLP--HQKSEEVKKLQA-----K---EVVAFVGDGINDAPALAQAD--------------LGIAVGSGSD 626 (723)
T ss_dssp --------CSCCT--TCHHHHHHHHTT-----T---CCEEEEECSSTTHHHHHHSS--------------EEEECCCCSC
T ss_pred --------ccCCH--HHHHHHHHHHhc-----C---CeEEEEECChhhHHHHhhCC--------------EEEEeCCCcH
Confidence 01112 258888887743 2 78999999999999999998 47888864
Q ss_pred --CcccceEe--CCHhHHHHHHH
Q 003042 813 --PSMAKYYL--DDTAEVINLLE 831 (854)
Q Consensus 813 --~s~A~y~l--~~~~eV~~~L~ 831 (854)
+..|++++ ++.+++.+.++
T Consensus 627 ~a~~~AD~vl~~~~~~~i~~~i~ 649 (723)
T 3j09_A 627 VAVESGDIVLIRDDLRDVVAAIQ 649 (723)
T ss_dssp CSSCCSSEECSSCCTTHHHHHHH
T ss_pred HHHHhCCEEEeCCCHHHHHHHHH
Confidence 57899998 67788877775
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.12 E-value=1.3e-06 Score=87.82 Aligned_cols=37 Identities=19% Similarity=0.259 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+..+++.+++.+ |++++++++|||+.||+.|++.+|.
T Consensus 152 ~~~~~~~~~~~~---~~~~~~~~~igD~~~Di~~a~~aG~ 188 (211)
T 2i6x_A 152 NEDIFLEMIADS---GMKPEETLFIDDGPANVATAERLGF 188 (211)
T ss_dssp SHHHHHHHHHHH---CCCGGGEEEECSCHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHh---CCChHHeEEeCCCHHHHHHHHHcCC
Confidence 567889999999 9999999999999999999999997
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.00 E-value=3.1e-06 Score=101.72 Aligned_cols=139 Identities=14% Similarity=0.194 Sum_probs=100.6
Q ss_pred HHHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEE
Q 003042 576 IASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYF 655 (854)
Q Consensus 576 i~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~ 655 (854)
..+.+.....+.+++..||+++..-.-...+.+++.++|++| ++.|++++++|||.......+.. .+++..
T Consensus 525 ~~~~~~~~G~~vl~va~d~~~~G~i~i~D~i~~~~~~aI~~L-~~~Gi~v~mlTGd~~~~a~~ia~---~lgi~~----- 595 (736)
T 3rfu_A 525 KADELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPETILEL-QQSGIEIVMLTGDSKRTAEAVAG---TLGIKK----- 595 (736)
T ss_dssp HHHHHHHTTCEEEEEEETTEEEEEEEEECCBCSSHHHHHHHH-HHHTCEEEEECSSCHHHHHHHHH---HHTCCC-----
T ss_pred HHHHHHhcCCeEEEEEECCEEEEEEEeeccchhhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHH---HcCCCE-----
Confidence 345566677899999999998741112345778899999999 88999999999999988887763 333310
Q ss_pred EEECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEE
Q 003042 656 TRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVV 735 (854)
Q Consensus 656 I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~ 735 (854)
.+...
T Consensus 596 -------------------------------------------------v~a~~-------------------------- 600 (736)
T 3rfu_A 596 -------------------------------------------------VVAEI-------------------------- 600 (736)
T ss_dssp -------------------------------------------------EECSC--------------------------
T ss_pred -------------------------------------------------EEEec--------------------------
Confidence 00011
Q ss_pred EEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC---
Q 003042 736 VKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK--- 812 (854)
Q Consensus 736 v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~--- 812 (854)
.| -+|...++.+.++ .+.|+++||+.||.+|++.++ ++|++|+.
T Consensus 601 ----------~P--~~K~~~v~~l~~~-------g~~V~~vGDG~ND~paL~~Ad--------------vGIAmg~g~d~ 647 (736)
T 3rfu_A 601 ----------MP--EDKSRIVSELKDK-------GLIVAMAGDGVNDAPALAKAD--------------IGIAMGTGTDV 647 (736)
T ss_dssp ----------CH--HHHHHHHHHHHHH-------SCCEEEEECSSTTHHHHHHSS--------------EEEEESSSCSH
T ss_pred ----------CH--HHHHHHHHHHHhc-------CCEEEEEECChHhHHHHHhCC--------------EEEEeCCccHH
Confidence 11 1477777777664 256999999999999999998 47888875
Q ss_pred -CcccceEe--CCHhHHHHHHH
Q 003042 813 -PSMAKYYL--DDTAEVINLLE 831 (854)
Q Consensus 813 -~s~A~y~l--~~~~eV~~~L~ 831 (854)
+..|++++ ++.+++.+.++
T Consensus 648 a~~~AD~vl~~~~~~~i~~ai~ 669 (736)
T 3rfu_A 648 AIESAGVTLLHGDLRGIAKARR 669 (736)
T ss_dssp HHHHCSEEECSCCSTTHHHHHH
T ss_pred HHHhCCEEEccCCHHHHHHHHH
Confidence 46889988 45666766654
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=1.4e-05 Score=89.18 Aligned_cols=157 Identities=12% Similarity=0.028 Sum_probs=98.3
Q ss_pred CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccE
Q 003042 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (854)
Q Consensus 325 ~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv 404 (854)
++.+++++|++. .|+...+..+++.+ ++. ++ .++.++.+.. +.++++ ...+.
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l-~~~-~~----~~~~~~g~~~----~~~~l~-----------------~~~~~ 293 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGL-AGL-DA----DVLVASGPSL----DVSGLG-----------------EVPAN 293 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHH-HTS-SS----EEEEECCSSC----CCTTCC-----------------CCCTT
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHH-HcC-CC----EEEEEECCCC----Chhhhc-----------------cCCCc
Confidence 456889999996 67776666666555 333 22 2444443221 001111 01123
Q ss_pred EEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcc----ccc
Q 003042 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG----CSP 480 (854)
Q Consensus 405 ~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~ 480 (854)
+.+.+.+ ++..+|+.||+||.+| |. .+.+|||+| +.|+|+.-..+ .++
T Consensus 294 v~~~~~~---~~~~~l~~ad~~v~~~---g~-~t~~Ea~a~---------------------G~P~v~~p~~~~q~~~~~ 345 (412)
T 3otg_A 294 VRLESWV---PQAALLPHVDLVVHHG---GS-GTTLGALGA---------------------GVPQLSFPWAGDSFANAQ 345 (412)
T ss_dssp EEEESCC---CHHHHGGGCSEEEESC---CH-HHHHHHHHH---------------------TCCEEECCCSTTHHHHHH
T ss_pred EEEeCCC---CHHHHHhcCcEEEECC---ch-HHHHHHHHh---------------------CCCEEecCCchhHHHHHH
Confidence 3455665 4888999999999776 32 578999999 34777754443 455
Q ss_pred cC---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHH
Q 003042 481 SL---SGAIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDL 538 (854)
Q Consensus 481 ~l---~~ai~vnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 538 (854)
.+ ..|++++|. |.++++++|.++|+.++ .++...+..+++...++....++.+.+-+
T Consensus 346 ~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 407 (412)
T 3otg_A 346 AVAQAGAGDHLLPDNISPDSVSGAAKRLLAEES-YRAGARAVAAEIAAMPGPDEVVRLLPGFA 407 (412)
T ss_dssp HHHHHTSEEECCGGGCCHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHSCCHHHHHTTHHHHH
T ss_pred HHHHcCCEEecCcccCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHhcCCCHHHHHHHHHHHh
Confidence 45 347889887 89999999999998764 44444555566666677776666554433
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=3.8e-05 Score=84.34 Aligned_cols=45 Identities=22% Similarity=0.313 Sum_probs=37.9
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCc
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~ 633 (854)
+.|.++||+||||+. ... +-+...++|+.| ++.|.+++++|+.+.
T Consensus 12 ~~~~~l~D~DGvl~~---g~~-~~p~a~~~l~~l-~~~g~~~~~vTNn~~ 56 (352)
T 3kc2_A 12 KKIAFAFDIDGVLFR---GKK-PIAGASDALKLL-NRNKIPYILLTNGGG 56 (352)
T ss_dssp CCEEEEECCBTTTEE---TTE-ECTTHHHHHHHH-HHTTCCEEEECSCCS
T ss_pred cCCEEEEECCCeeEc---CCe-eCcCHHHHHHHH-HHCCCEEEEEeCCCC
Confidence 689999999999998 443 446788899999 889999999997753
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=97.87 E-value=9.3e-06 Score=83.00 Aligned_cols=37 Identities=14% Similarity=0.209 Sum_probs=34.8
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+..+++.+++.+ |++++++++|||+.||+.|++.+|.
T Consensus 175 ~~~~~~~~~~~~---g~~~~~~~~vGD~~~Di~~a~~aG~ 211 (229)
T 4dcc_A 175 EPEIFKAVTEDA---GIDPKETFFIDDSEINCKVAQELGI 211 (229)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEECSCHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHc---CCCHHHeEEECCCHHHHHHHHHcCC
Confidence 458899999999 9999999999999999999999997
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=4.2e-05 Score=90.71 Aligned_cols=149 Identities=12% Similarity=0.124 Sum_probs=104.3
Q ss_pred CCCEEEEEecCccccCCHHH-HHHHHHHHHH--hCCCCC-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCC
Q 003042 324 DGKIVILGVDDMDLFKGISL-KFLAMGQLLE--QHPDLR-GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKP 399 (854)
Q Consensus 324 ~~~~iil~VdRld~~KGi~~-~l~A~~~ll~--~~p~~~-~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~ 399 (854)
++..+++.|.|+...||..+ .+..++++++ .+|+.. ..+++|..|....+. .....+-+.+..++.-||..-...
T Consensus 524 pd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~Dp~~~ 602 (796)
T 1l5w_A 524 PQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVADVINNDPLVG 602 (796)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTG
T ss_pred CCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhH-HHHHHHHHHHHHHHHHhccccccC
Confidence 35788999999999999999 8999988865 456521 257777766544222 223455667888888888642223
Q ss_pred CCccEEEEcCCCChhhHHHHHHhCcEEEEccC--ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcc
Q 003042 400 GYEPIVIIKEPLSTQDKVPYYAIAECCVVNCV--RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG 477 (854)
Q Consensus 400 ~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~--~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 477 (854)
+.-.|+|+.+ .+..--..+|.+||+++.||+ .|.-|+.-+-||.- |.|-+|..-|
T Consensus 603 ~~lKVvfl~n-Y~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N----------------------GaL~iGtLDG 659 (796)
T 1l5w_A 603 DKLKVVFLPD-YCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN----------------------GALTVGTLDG 659 (796)
T ss_dssp GGEEEEECSS-CCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT----------------------TCEEEECSCT
T ss_pred CceEEEEECC-CCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc----------------------CCeeecCcCC
Confidence 3334666664 555555689999999999999 89888888777763 5666687777
Q ss_pred ccccC------CCceEeCCCCHHHHH
Q 003042 478 CSPSL------SGAIRVNPWNVDAVA 497 (854)
Q Consensus 478 ~~~~l------~~ai~vnP~d~~~~A 497 (854)
+-.++ .+++++-. +.+++.
T Consensus 660 anvEi~e~vG~~NgF~FG~-~~~ev~ 684 (796)
T 1l5w_A 660 ANVEIAEKVGEENIFIFGH-TVEQVK 684 (796)
T ss_dssp THHHHHHHHCGGGSEECSC-CHHHHH
T ss_pred eeeehhhccCCCcEEEecC-CHHHHH
Confidence 76554 24788876 677765
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=97.87 E-value=1.3e-05 Score=93.03 Aligned_cols=174 Identities=8% Similarity=-0.072 Sum_probs=105.8
Q ss_pred CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEE-EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccE
Q 003042 326 KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ-ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (854)
Q Consensus 326 ~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq-i~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv 404 (854)
..++.+..|+ .|..+..++++.+++++.|+. +.++. ++. +.+.. ..+.+++.+ ..| .+.
T Consensus 441 ~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s---~L~l~~~g~---~~g~~-~~~~~~~~~--~GI---------~~R 500 (631)
T 3q3e_A 441 VVNIGIASTT--MKLNPYFLEALKAIRDRAKVK---VHFHFALGQ---SNGIT-HPYVERFIK--SYL---------GDS 500 (631)
T ss_dssp EEEEEEEECS--TTCCHHHHHHHHHHHHHCSSE---EEEEEEESS---CCGGG-HHHHHHHHH--HHH---------GGG
T ss_pred eEEEEECCcc--ccCCHHHHHHHHHHHHhCCCc---EEEEEecCC---Cchhh-HHHHHHHHH--cCC---------Ccc
Confidence 5677778875 699999999999999999963 22222 332 12222 222222221 112 123
Q ss_pred EEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC-
Q 003042 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS- 483 (854)
Q Consensus 405 ~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~- 483 (854)
+.|.+.++.++..++|+.||+|+.|+.+.| |++++|||+| |-|+|.....+.+.-+.
T Consensus 501 v~F~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwm---------------------GVPVVTl~G~~~asRvga 558 (631)
T 3q3e_A 501 ATAHPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTL---------------------GLVGVCKTGAEVHEHIDE 558 (631)
T ss_dssp EEEECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHT---------------------TCCEEEECCSSHHHHHHH
T ss_pred EEEcCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHc---------------------CCCEEeccCCcHHHHhHH
Confidence 346678999999999999999999998876 9999999999 33555543332221111
Q ss_pred ------C--ceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccc-cChHHHHHHHHHHHHHHHH
Q 003042 484 ------G--AIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS-HDVAYWAKSIDQDLERACR 543 (854)
Q Consensus 484 ------~--ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~~ 543 (854)
| .++| -.|.++.+++..++.++++..++.| +++++.+.+ .-+..|.++|-+.++++..
T Consensus 559 SlL~~~GLpE~LI-A~d~eeYv~~Av~La~D~~~l~~LR-~~Lr~~~~~spLFd~~~~~~e~~ye~~~~ 625 (631)
T 3q3e_A 559 GLFKRLGLPEWLI-ANTVDEYVERAVRLAENHQERLELR-RYIIENNGLNTLFTGDPRPMGQVFLEKLN 625 (631)
T ss_dssp HHHHHTTCCGGGE-ESSHHHHHHHHHHHHHCHHHHHHHH-HHHHHSCCHHHHTCSCCTHHHHHHHHHHH
T ss_pred HHHHhcCCCccee-cCCHHHHHHHHHHHhCCHHHHHHHH-HHHHHHhhhCCCcchhHHHHHHHHHHHHH
Confidence 1 2223 2378999988888888776544444 444433322 1112455555555555443
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=97.85 E-value=5.7e-05 Score=94.65 Aligned_cols=166 Identities=17% Similarity=0.216 Sum_probs=92.8
Q ss_pred CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceEEccccccchHHHHHHH
Q 003042 602 EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEP 681 (854)
Q Consensus 602 ~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~~~~~~~~~~~~~~v~~ 681 (854)
....+.+++.++|+++ ++.|++|+++|||....+..+.. .+++..+++.. +.+..+.
T Consensus 601 i~Dp~r~~~~~aI~~l-~~aGI~vvmiTGd~~~tA~~ia~---~lgi~~~~~~~-------------------i~~~~~~ 657 (1034)
T 3ixz_A 601 MIDPPRATVPDAVLKC-RTAGIRVIMVTGDHPITAKAIAA---SVGIISEGSET-------------------VEDIAAR 657 (1034)
T ss_pred ccCCCchhHHHHHHHH-HHcCCeEEEEeCCCHHHHHHHHH---HcCCCCCCchH-------------------HHHHHHh
Confidence 3456889999999999 99999999999999999988873 45554432210 0111110
Q ss_pred HHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHH
Q 003042 682 VMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLIS 761 (854)
Q Consensus 682 ~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~ 761 (854)
. ..... .+...........-... .....+++ .+.+......+ +..+.| ..|...++.+.+
T Consensus 658 ~-~~~~~----~~~~~~~~~~~~~g~~l----~~~~~~~l----~~~~~~~~~~v-----~ar~~P--~~K~~iv~~lq~ 717 (1034)
T 3ixz_A 658 L-RVPVD----QVNRKDARACVINGMQL----KDMDPSEL----VEALRTHPEMV-----FARTSP--QQKLVIVESCQR 717 (1034)
T ss_pred h-Cccch----hccccccceeEEecHhh----hhCCHHHH----HHHHHhCCceE-----EEecCH--HHHHHHHHHHHH
Confidence 0 00000 00000000011110000 00011122 22222221111 222333 358777776544
Q ss_pred HHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEec-CC----CcccceEeC--CHhHHHHHHH
Q 003042 762 TMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVG-QK----PSMAKYYLD--DTAEVINLLE 831 (854)
Q Consensus 762 ~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG-~~----~s~A~y~l~--~~~eV~~~L~ 831 (854)
. | ..|+++||+.||.+||+.|+. +|+|| +. +..|++++. +.+.++..++
T Consensus 718 ~----g---~~V~a~GDG~ND~~mLk~A~v--------------GIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~ 773 (1034)
T 3ixz_A 718 L----G---AIVAVTGDGVNDSPALKKADI--------------GVAMGIAGSDAAKNAADMILLDDNFASIVTGVE 773 (1034)
T ss_pred c----C---CEEEEECCcHHhHHHHHHCCe--------------eEEeCCccCHHHHHhcCEEeccCCchHHHHHHH
Confidence 2 3 469999999999999999984 78888 53 578999985 4566776664
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=2.5e-06 Score=84.28 Aligned_cols=51 Identities=14% Similarity=0.345 Sum_probs=39.1
Q ss_pred hhcCCeEEEEecCCCCCCCCC--------CCCCCCHHHHHHHHHcccCCCCeEEEEcCCC
Q 003042 581 NKTNSRLILLDYDGTVMPQTS--------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (854)
Q Consensus 581 ~~~~~klI~~DlDGTLl~~~~--------~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~ 632 (854)
..+.+|+++||+||||+...+ ....+.+.+.++|+.| ++.|++++|+|+.+
T Consensus 10 ~~~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~L~~L-~~~G~~l~i~Tn~~ 68 (176)
T 2fpr_A 10 HGSSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKL-QKAGYKLVMITNQD 68 (176)
T ss_dssp ---CCEEEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHH-HHTTEEEEEEEECT
T ss_pred cCCcCcEEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHHHHHH-HHCCCEEEEEECCc
Confidence 346789999999999987321 1234678899999999 78899999999975
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=97.83 E-value=2e-05 Score=93.46 Aligned_cols=151 Identities=8% Similarity=0.102 Sum_probs=105.2
Q ss_pred CCCEEEEEecCccccCCHHH-HHHHHHHHHH--hCCCCC-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCC
Q 003042 324 DGKIVILGVDDMDLFKGISL-KFLAMGQLLE--QHPDLR-GKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKP 399 (854)
Q Consensus 324 ~~~~iil~VdRld~~KGi~~-~l~A~~~ll~--~~p~~~-~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~ 399 (854)
++..+++.|.|+...||..+ .+..++++++ ++|+.. ..+++|..|....+. .....+-+.+..++.-||..-...
T Consensus 514 pd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~dp~~~ 592 (796)
T 2c4m_A 514 PESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGY-VRAKAIIKLINSIADLVNNDPEVS 592 (796)
T ss_dssp TTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTT
T ss_pred CCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhH-HHHHHHHHHHHHHHHHhccccccC
Confidence 36789999999999999999 8999998875 566522 247777666544222 223456667888888888643334
Q ss_pred CCccEEEEcCCCChhhHHHHHHhCcEEEEccC--ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcc
Q 003042 400 GYEPIVIIKEPLSTQDKVPYYAIAECCVVNCV--RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG 477 (854)
Q Consensus 400 ~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~--~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 477 (854)
+.-.|+|+.+ .+..--..+|.+||+++.||+ .|.-|+.-+-||.- |.|-+|..-|
T Consensus 593 ~~lKVvFl~n-Y~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N----------------------GaL~iGtLDG 649 (796)
T 2c4m_A 593 PLLKVVFVEN-YNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMN----------------------GALTLGTMDG 649 (796)
T ss_dssp TTEEEEEETT-CCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHT----------------------TCEEEEESST
T ss_pred CceEEEEECC-CCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc----------------------CCeEEeccCC
Confidence 4445777765 455555589999999999999 88888887777763 5566677777
Q ss_pred ccccC------CCceEeCC--CCHHHHHH
Q 003042 478 CSPSL------SGAIRVNP--WNVDAVAD 498 (854)
Q Consensus 478 ~~~~l------~~ai~vnP--~d~~~~A~ 498 (854)
+-.++ .+++++-. .++.++-.
T Consensus 650 anvEi~e~vG~~NgF~FG~~~~ev~~l~~ 678 (796)
T 2c4m_A 650 ANVEIVDSVGEENAYIFGARVEELPALRE 678 (796)
T ss_dssp HHHHHHHHHCGGGSEEESCCTTTHHHHHH
T ss_pred eEeehhhhcCCCcEEEecCchhhHHHHHH
Confidence 65554 24777765 55555543
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00014 Score=80.84 Aligned_cols=99 Identities=10% Similarity=-0.022 Sum_probs=62.1
Q ss_pred EEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEE----ecCccccc
Q 003042 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIV----SEFIGCSP 480 (854)
Q Consensus 405 ~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~----Se~~G~~~ 480 (854)
+.+.+.++ ...++..||++|. .|-+.+..|||+|+ .|+|+ .+..+.++
T Consensus 286 v~~~~~~~---~~~ll~~ad~~v~----~gG~~t~~Ea~~~G---------------------~P~v~~p~~~~q~~~a~ 337 (398)
T 4fzr_A 286 VLAAGQFP---LSAIMPACDVVVH----HGGHGTTLTCLSEG---------------------VPQVSVPVIAEVWDSAR 337 (398)
T ss_dssp EEEESCCC---HHHHGGGCSEEEE----CCCHHHHHHHHHTT---------------------CCEEECCCSGGGHHHHH
T ss_pred EEEeCcCC---HHHHHhhCCEEEe----cCCHHHHHHHHHhC---------------------CCEEecCCchhHHHHHH
Confidence 34555665 5677888999994 44456789999993 47777 44445555
Q ss_pred cC---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHH
Q 003042 481 SL---SGAIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAK 532 (854)
Q Consensus 481 ~l---~~ai~vnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 532 (854)
.+ ..|+++++. |.++++++|.++|+.+.. |+...+...++.........++
T Consensus 338 ~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 393 (398)
T 4fzr_A 338 LLHAAGAGVEVPWEQAGVESVLAACARIRDDSSY-VGNARRLAAEMATLPTPADIVR 393 (398)
T ss_dssp HHHHTTSEEECC-------CHHHHHHHHHHCTHH-HHHHHHHHHHHTTSCCHHHHHH
T ss_pred HHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHH-HHHHHHHHHHHHcCCCHHHHHH
Confidence 45 347888877 789999999999998753 3333344445555566555444
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=97.67 E-value=4.6e-05 Score=90.64 Aligned_cols=151 Identities=9% Similarity=0.071 Sum_probs=104.1
Q ss_pred CCCEEEEEecCccccCCHHHH-HHHHHHHH--HhCCCCCC-cEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCC
Q 003042 324 DGKIVILGVDDMDLFKGISLK-FLAMGQLL--EQHPDLRG-KVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKP 399 (854)
Q Consensus 324 ~~~~iil~VdRld~~KGi~~~-l~A~~~ll--~~~p~~~~-~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~ 399 (854)
++..+++.|.|+...||..+. +..+++++ ..+|+..- .+++|..|....+. .....+-+.+.+++..+|..-...
T Consensus 548 pd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIkli~~va~~in~Dp~v~ 626 (824)
T 2gj4_A 548 PNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGY-HMAKMIIKLITAIGDVVNHDPVVG 626 (824)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHTTCTTTG
T ss_pred CCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhH-HHHHHHHHHHHHHHHHhccCcccC
Confidence 367899999999999999998 88888886 36665321 46777666544222 223455666888888887553333
Q ss_pred CCccEEEEcCCCChhhHHHHHHhCcEEEEccC--ccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcc
Q 003042 400 GYEPIVIIKEPLSTQDKVPYYAIAECCVVNCV--RDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG 477 (854)
Q Consensus 400 ~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~--~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 477 (854)
+.-.|+|+.+ .+..--..+|.+||+++.||+ .|.-|+.-+-||.- |.|-+|..-|
T Consensus 627 ~~lKVvFl~n-YdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlN----------------------GaLtigtlDG 683 (824)
T 2gj4_A 627 DRLRVIFLEN-YRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN----------------------GALTIGTMDG 683 (824)
T ss_dssp GGEEEEEETT-CCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT----------------------TCEEEECSCT
T ss_pred CceEEEEECC-CCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc----------------------CceEEEEecC
Confidence 3334777765 455555589999999999999 89888887777763 5666666667
Q ss_pred ccccC------CCceEeCCCCHHHHHHHH
Q 003042 478 CSPSL------SGAIRVNPWNVDAVADAM 500 (854)
Q Consensus 478 ~~~~l------~~ai~vnP~d~~~~A~ai 500 (854)
+..++ .+++++... .+++ .++
T Consensus 684 anvEi~e~vG~~Ngf~FG~~-~~ev-~~l 710 (824)
T 2gj4_A 684 ANVEMAEEAGEENFFIFGMR-VEDV-DRL 710 (824)
T ss_dssp THHHHHHHHCGGGSEECSCC-HHHH-HHH
T ss_pred ccchhhhccCCCCEEEeCCc-HHHH-HHH
Confidence 65333 237888765 6666 444
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=7.5e-05 Score=85.83 Aligned_cols=37 Identities=19% Similarity=0.206 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+....+.+++++ |++++++++|||+.+|+.+.+.+|.
T Consensus 162 ~p~~~~~~~~~l---g~~p~~~~~v~D~~~di~~a~~aG~ 198 (555)
T 3i28_A 162 EPQIYKFLLDTL---KASPSEVVFLDDIGANLKPARDLGM 198 (555)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHc---CCChhHEEEECCcHHHHHHHHHcCC
Confidence 567899999999 9999999999999999999999997
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=97.43 E-value=2.3e-05 Score=82.39 Aligned_cols=51 Identities=20% Similarity=0.319 Sum_probs=43.1
Q ss_pred hcCCeEEEEecCCCCCCCCCCC-------------------------CCCCHHHHHHHHHcccCCCCeEEEEcCCCccch
Q 003042 582 KTNSRLILLDYDGTVMPQTSED-------------------------KRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSL 636 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~~-------------------------~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l 636 (854)
..++++|+||+||||++ +. ..+.+.+.++|+.| ++.|+.++|+|||+....
T Consensus 56 ~~~~kavifDlDGTLld---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L-~~~Gi~i~iaTnr~~~~~ 131 (258)
T 2i33_A 56 TEKKPAIVLDLDETVLD---NSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYT-ESKGVDIYYISNRKTNQL 131 (258)
T ss_dssp CSSEEEEEECSBTTTEE---CHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHH-HHTTCEEEEEEEEEGGGH
T ss_pred CCCCCEEEEeCcccCcC---CHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHH-HHCCCEEEEEcCCchhHH
Confidence 44689999999999998 42 56778999999999 889999999999995443
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=8.4e-05 Score=82.38 Aligned_cols=154 Identities=12% Similarity=0.058 Sum_probs=97.5
Q ss_pred CCEEEEEecCccccCCH-HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCcc
Q 003042 325 GKIVILGVDDMDLFKGI-SLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (854)
Q Consensus 325 ~~~iil~VdRld~~KGi-~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~p 403 (854)
.+.++++.|++...|+. ...++++.+. ++.|+++ ++.++.+ .+.+.+. ...+
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~----~v~~~~~-----~~~~~l~-----------------~~~~ 270 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVE----AVIAVPP-----EHRALLT-----------------DLPD 270 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEE----EEEECCG-----GGGGGCT-----------------TCCT
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeE----EEEEECC-----cchhhcc-----------------cCCC
Confidence 35678889999886655 7788888887 7777654 5555432 1111111 0112
Q ss_pred EEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEe----cCcccc
Q 003042 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVS----EFIGCS 479 (854)
Q Consensus 404 v~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~S----e~~G~~ 479 (854)
-+.+.+.++..++ +..||++|.. |-..+..|||+|+ .|+|+. +..+.+
T Consensus 271 ~v~~~~~~~~~~l---l~~ad~~v~~----~G~~t~~Ea~~~G---------------------~P~v~~p~~~~q~~~a 322 (391)
T 3tsa_A 271 NARIAESVPLNLF---LRTCELVICA----GGSGTAFTATRLG---------------------IPQLVLPQYFDQFDYA 322 (391)
T ss_dssp TEEECCSCCGGGT---GGGCSEEEEC----CCHHHHHHHHHTT---------------------CCEEECCCSTTHHHHH
T ss_pred CEEEeccCCHHHH---HhhCCEEEeC----CCHHHHHHHHHhC---------------------CCEEecCCcccHHHHH
Confidence 3445566776654 5999999953 4445789999993 477763 333334
Q ss_pred ccC---CCceEeCC----CCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHH
Q 003042 480 PSL---SGAIRVNP----WNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSI 534 (854)
Q Consensus 480 ~~l---~~ai~vnP----~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~ 534 (854)
+.+ ..|+++++ .|.++++++|.++|+.+...+ ...+...++.......+.++.+
T Consensus 323 ~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i 383 (391)
T 3tsa_A 323 RNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGFAA-AAIKLSDEITAMPHPAALVRTL 383 (391)
T ss_dssp HHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTHHHH-HHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHcCCEEecCcccccCCHHHHHHHHHHHHcCHHHHH-HHHHHHHHHHcCCCHHHHHHHH
Confidence 434 34788988 789999999999999875433 3333444455556665555443
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.34 E-value=1.1e-05 Score=82.16 Aligned_cols=66 Identities=9% Similarity=-0.004 Sum_probs=47.7
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcc-cHHHHHHhhhhcCCCCCCCCccEEEEEecCCCcccceEeCCHhHHHHHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRS-DEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLL 830 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~N-D~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~s~A~y~l~~~~eV~~~L 830 (854)
+....+.+++.+ |+++ ++|||+.+ |+.+.+.+|.. ++.|..+.......+++++..++..+|
T Consensus 152 ~~~~~~~~~~~~---~~~~---~~vgD~~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~~~~i~~l~el~~~l 214 (220)
T 2zg6_A 152 NPKIFGFALAKV---GYPA---VHVGDIYELDYIGAKRSYVD-----------PILLDRYDFYPDVRDRVKNLREALQKI 214 (220)
T ss_dssp -CCHHHHHHHHH---CSSE---EEEESSCCCCCCCSSSCSEE-----------EEEBCTTSCCTTCCSCBSSHHHHHHHH
T ss_pred CHHHHHHHHHHc---CCCe---EEEcCCchHhHHHHHHCCCe-----------EEEECCCCCCCCcceEECCHHHHHHHH
Confidence 445788899998 8887 99999998 99999999873 233332222222256789999999888
Q ss_pred HHHH
Q 003042 831 EGLA 834 (854)
Q Consensus 831 ~~l~ 834 (854)
..+.
T Consensus 215 ~~~~ 218 (220)
T 2zg6_A 215 EEMN 218 (220)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 7653
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00017 Score=81.19 Aligned_cols=49 Identities=20% Similarity=0.317 Sum_probs=38.9
Q ss_pred cCCeEEEEecCCCCCCCCCC--------C-CCCCHHHHHHHHHcccCCCCeEEEEcCCC
Q 003042 583 TNSRLILLDYDGTVMPQTSE--------D-KRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~--------~-~~is~~~~~aL~~L~~~~g~~v~I~TGR~ 632 (854)
+++|+++||+||||+...+. . ..+.+.+.++|+.| ++.|+.++|+|+++
T Consensus 56 ~~~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L-~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 56 PQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQEL-AAEGYKLVIFTNQM 113 (416)
T ss_dssp CCSSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHH-HHTTCEEEEEEECH
T ss_pred CCCeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHH-HHCCCeEEEEeCCc
Confidence 46899999999999862210 0 12568899999999 88999999999975
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00053 Score=85.81 Aligned_cols=163 Identities=19% Similarity=0.235 Sum_probs=92.2
Q ss_pred CCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceEEccccccchHHHHHHHHHH
Q 003042 605 RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMK 684 (854)
Q Consensus 605 ~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 684 (854)
.+.+++.++|+++ ++.|++|+++||+.......+. ..+++..++|..+ .+.....-.
T Consensus 599 plr~~~~~aI~~l-~~aGI~v~miTGD~~~tA~~ia---~~lgi~~~~~~~i-------------------~~~~~~~~~ 655 (1028)
T 2zxe_A 599 PPRAAVPDAVGKC-RSAGIKVIMVTGDHPITAKAIA---KGVGIISEGNETI-------------------EDIAARLNI 655 (1028)
T ss_dssp CBCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHH---HHHTSSCTTCCCH-------------------HHHHHHTTC
T ss_pred CCChhHHHHHHHH-HHcCCEEEEECCCCHHHHHHHH---HHcCCCCCCchhH-------------------HHHHhhcCc
Confidence 5678999999998 8999999999999999998887 4566655444211 000000000
Q ss_pred HHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHh
Q 003042 685 LYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMR 764 (854)
Q Consensus 685 ~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~ 764 (854)
.+.... ..........-...+. ...+++ + +.+......+ +..+.| -+|...++.+.+.
T Consensus 656 ~~~~~~-----~~~~~~~vi~G~~l~~----~~~~~l-~---~~~~~~~~~v-----~ar~~P--~~K~~iV~~lq~~-- 713 (1028)
T 2zxe_A 656 PIGQVN-----PRDAKACVVHGSDLKD----LSTEVL-D---DILHYHTEIV-----FARTSP--QQKLIIVEGCQRQ-- 713 (1028)
T ss_dssp CGGGSC-----GGGCCEEEEEHHHHTT----CCHHHH-H---HHHHHCSEEE-----EESCCH--HHHHHHHHHHHHT--
T ss_pred chhhcc-----ccccceEEEEcHHhhh----CCHHHH-H---HHHhhCCcEE-----EEEcCH--HHHHHHHHHHHhC--
Confidence 000000 0000111111111100 011111 1 2222211111 112223 3698888887653
Q ss_pred hCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEec-CC----CcccceEeCC--HhHHHHHHH
Q 003042 765 SRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVG-QK----PSMAKYYLDD--TAEVINLLE 831 (854)
Q Consensus 765 ~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG-~~----~s~A~y~l~~--~~eV~~~L~ 831 (854)
| ..|+++||+.||.+||+.|+. +|+|| +. +..|++++.+ .+.+.+.++
T Consensus 714 --g---~~V~~iGDG~ND~paLk~Adv--------------GIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~ 768 (1028)
T 2zxe_A 714 --G---AIVAVTGDGVNDSPALKKADI--------------GVAMGISGSDVSKQAADMILLDDNFASIVTGVE 768 (1028)
T ss_dssp --T---CCEEEEECSGGGHHHHHHSSE--------------EEEESSSCCHHHHHHCSEEETTCCTHHHHHHHH
T ss_pred --C---CEEEEEcCCcchHHHHHhCCc--------------eEEeCCccCHHHHHhcCEEecCCCHHHHHHHHH
Confidence 3 569999999999999999984 78888 34 4678998853 666666654
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0011 Score=70.75 Aligned_cols=48 Identities=21% Similarity=0.330 Sum_probs=39.5
Q ss_pred CCeEEEEecCCCCCCCCCCCCC------------CCHHHHHHHHHcccCCCCeEEEEcCCCccc
Q 003042 584 NSRLILLDYDGTVMPQTSEDKR------------PSTEVLSILNDLCNDPKNAVFIVSGRGKDS 635 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~------------is~~~~~aL~~L~~~~g~~v~I~TGR~~~~ 635 (854)
..+.+++|.|||+.. .... +-+.+.++|+.| ++.|++++|+|||+...
T Consensus 158 ~~~~i~iD~dgtl~~---~~~~~~~~~~~~~~~~~~~g~~e~L~~L-~~~g~~~~v~T~k~~~~ 217 (301)
T 1ltq_A 158 KPKAVIFDVDGTLAK---MNGRGPYDLEKCDTDVINPMVVELSKMY-ALMGYQIVVVSGRESGT 217 (301)
T ss_dssp SCEEEEEETBTTTBC---CSSCCTTCGGGGGGCCBCHHHHHHHHHH-HHTTCEEEEEECSCCCC
T ss_pred ccceEEEeCCCCccc---ccCCCchhhhhccccCCChHHHHHHHHH-HHCCCeEEEEeCCCccc
Confidence 457899999999987 3333 368999999999 78999999999998554
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00065 Score=76.25 Aligned_cols=103 Identities=10% Similarity=-0.025 Sum_probs=66.7
Q ss_pred EEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcc----ccc
Q 003042 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG----CSP 480 (854)
Q Consensus 405 ~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~ 480 (854)
+.+.+.+++. .+|+.||++|..+ |. .+.+|||+| |-|+|++-..| .++
T Consensus 285 v~~~~~~~~~---~~l~~ad~~v~~~---G~-~t~~Ea~~~---------------------G~P~i~~p~~~~q~~~a~ 336 (430)
T 2iyf_A 285 VEVHDWVPQL---AILRQADLFVTHA---GA-GGSQEGLAT---------------------ATPMIAVPQAVDQFGNAD 336 (430)
T ss_dssp EEEESSCCHH---HHHTTCSEEEECC---CH-HHHHHHHHT---------------------TCCEEECCCSHHHHHHHH
T ss_pred eEEEecCCHH---HHhhccCEEEECC---Cc-cHHHHHHHh---------------------CCCEEECCCccchHHHHH
Confidence 3455667765 6899999988755 44 578999999 34888876654 233
Q ss_pred cC---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHH
Q 003042 481 SL---SGAIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQ 536 (854)
Q Consensus 481 ~l---~~ai~vnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 536 (854)
.+ ..|+.+++. |.++++++|.++|+.++ .++...+...+....++....++.+.+
T Consensus 337 ~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~ 396 (430)
T 2iyf_A 337 MLQGLGVARKLATEEATADLLRETALALVDDPE-VARRLRRIQAEMAQEGGTRRAADLIEA 396 (430)
T ss_dssp HHHHTTSEEECCCC-CCHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred HHHHcCCEEEcCCCCCCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 33 347888877 88999999999998653 333333333333344455555444433
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00091 Score=83.53 Aligned_cols=141 Identities=17% Similarity=0.249 Sum_probs=89.2
Q ss_pred CCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceEEccccccchHHHHHHHHHH
Q 003042 605 RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMK 684 (854)
Q Consensus 605 ~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 684 (854)
.+.+++.++|+.| ++.|++++++||+.......+. ..+++...+... .
T Consensus 603 ~lr~~~~~~I~~l-~~~Gi~v~miTGD~~~ta~~ia---~~lgi~~~~~~i-------------~--------------- 650 (995)
T 3ar4_A 603 PPRKEVMGSIQLC-RDAGIRVIMITGDNKGTAIAIC---RRIGIFGENEEV-------------A--------------- 650 (995)
T ss_dssp CBCTTHHHHHHHH-HHTTCEEEEEESSCHHHHHHHH---HHHTSSCTTCCC-------------T---------------
T ss_pred CCchhHHHHHHHH-HHcCCEEEEECCCCHHHHHHHH---HHcCcCCCCCcc-------------c---------------
Confidence 4667899999998 8999999999999999988887 345554322100 0
Q ss_pred HHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHh
Q 003042 685 LYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMR 764 (854)
Q Consensus 685 ~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~ 764 (854)
+..+...+ +...++ +++.+.+. +. .-+.++.|. +|...++.+.++
T Consensus 651 -------~~~~~g~~------~~~l~~-------~~~~~~~~----~~-------~v~~r~~P~--~K~~~v~~l~~~-- 695 (995)
T 3ar4_A 651 -------DRAYTGRE------FDDLPL-------AEQREACR----RA-------CCFARVEPS--HKSKIVEYLQSY-- 695 (995)
T ss_dssp -------TTEEEHHH------HHTSCH-------HHHHHHHH----HC-------CEEESCCSS--HHHHHHHHHHTT--
T ss_pred -------ceEEEchh------hhhCCH-------HHHHHHHh----hC-------cEEEEeCHH--HHHHHHHHHHHC--
Confidence 00000000 000111 11212121 11 123344554 799999988653
Q ss_pred hCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeC--CHhHHHHHHH
Q 003042 765 SRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLD--DTAEVINLLE 831 (854)
Q Consensus 765 ~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~--~~~eV~~~L~ 831 (854)
| +.|+++||+.||.+|++.|+. ++++|+. +..|++++. +...+.+.+.
T Consensus 696 --g---~~v~~~GDG~ND~~alk~Adv--------------giamg~g~~~ak~aAd~vl~~~~~~~i~~~i~ 749 (995)
T 3ar4_A 696 --D---EITAMTGDGVNDAPALKKAEI--------------GIAMGSGTAVAKTASEMVLADDNFSTIVAAVE 749 (995)
T ss_dssp --T---CCEEEEECSGGGHHHHHHSTE--------------EEEETTSCHHHHHTCSEEETTCCHHHHHHHHH
T ss_pred --C---CEEEEEcCCchhHHHHHHCCe--------------EEEeCCCCHHHHHhCCEEECCCCHHHHHHHHH
Confidence 3 689999999999999999984 7888854 357899984 5777776654
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=96.13 E-value=8.6e-05 Score=78.14 Aligned_cols=51 Identities=22% Similarity=0.393 Sum_probs=40.7
Q ss_pred CCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEe--CCHhHHHHHHH
Q 003042 767 GKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYL--DDTAEVINLLE 831 (854)
Q Consensus 767 gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l--~~~~eV~~~L~ 831 (854)
+..++++++|||+.||+++++.+|. +|++|.. ...|++++ ++..++..+|+
T Consensus 195 ~~~~~~~~~VGD~~~D~~aa~~Agv--------------~va~g~~~~~~~~~ad~v~~~~~l~~l~~~l~ 251 (263)
T 2yj3_A 195 KQNGNKVLMIGDGVNDAAALALADV--------------SVAMGNGVDISKNVADIILVSNDIGTLLGLIK 251 (263)
Confidence 6678899999999999999999985 5666643 35688888 78888777664
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00027 Score=71.73 Aligned_cols=66 Identities=17% Similarity=0.234 Sum_probs=45.4
Q ss_pred cCHHHHHHHHhhcCCeEEEEecCCCCCCCCCC-------------------------------CCCCCHHHHHHHHHccc
Q 003042 571 LGMHHIASAYNKTNSRLILLDYDGTVMPQTSE-------------------------------DKRPSTEVLSILNDLCN 619 (854)
Q Consensus 571 l~~~~i~~~y~~~~~klI~~DlDGTLl~~~~~-------------------------------~~~is~~~~~aL~~L~~ 619 (854)
..++++...-..+++|+|+||+||||++.... ...+.+.+.+.|+.| +
T Consensus 23 ~~~~~i~~~~~~~~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L-~ 101 (211)
T 2b82_A 23 VSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMH-V 101 (211)
T ss_dssp ECHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHH-H
T ss_pred eeHhhHhhhcccCCCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHH-H
Confidence 34566665555567899999999999982100 001234677888888 7
Q ss_pred CCCCeEEEEcCCCccchh
Q 003042 620 DPKNAVFIVSGRGKDSLG 637 (854)
Q Consensus 620 ~~g~~v~I~TGR~~~~l~ 637 (854)
+.|++++|+|+++.....
T Consensus 102 ~~G~~l~ivTn~~~~~~~ 119 (211)
T 2b82_A 102 RRGDAIFFVTGRSPTKTE 119 (211)
T ss_dssp HHTCEEEEEECSCCCSSC
T ss_pred HCCCEEEEEcCCcHHHHH
Confidence 778999999998765443
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0013 Score=63.82 Aligned_cols=124 Identities=10% Similarity=0.115 Sum_probs=81.2
Q ss_pred CCEEEEEecCcc---ccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCC
Q 003042 325 GKIVILGVDDMD---LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGY 401 (854)
Q Consensus 325 ~~~iil~VdRld---~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~ 401 (854)
...+++++|++. +.|++...++|+.++ + + .++.++.+.. .+ ..
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~----~-~----~~~~~~g~~~---~~-----------------~~----- 66 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI----P-Q----KVLWRFDGNK---PD-----------------TL----- 66 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS----S-S----EEEEECCSSC---CT-----------------TC-----
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC----C-C----eEEEEECCcC---cc-----------------cC-----
Confidence 467899999995 678888888887532 2 2 2444443211 00 01
Q ss_pred ccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcc----
Q 003042 402 EPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG---- 477 (854)
Q Consensus 402 ~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G---- 477 (854)
.+-+.+.+.+++.++.++ ..||++|.. -| +.+..|+|+|+ -|+|+.-..+
T Consensus 67 ~~~v~~~~~~~~~~~l~~-~~ad~~I~~---~G-~~t~~Ea~~~G---------------------~P~i~~p~~~~Q~~ 120 (170)
T 2o6l_A 67 GLNTRLYKWIPQNDLLGH-PKTRAFITH---GG-ANGIYEAIYHG---------------------IPMVGIPLFADQPD 120 (170)
T ss_dssp CTTEEEESSCCHHHHHTS-TTEEEEEEC---CC-HHHHHHHHHHT---------------------CCEEECCCSTTHHH
T ss_pred CCcEEEecCCCHHHHhcC-CCcCEEEEc---CC-ccHHHHHHHcC---------------------CCEEeccchhhHHH
Confidence 112345678888776654 999999963 34 47899999993 4777776642
Q ss_pred ccccC---CCceEeCCC--CHHHHHHHHHHHhcCCH
Q 003042 478 CSPSL---SGAIRVNPW--NVDAVADAMDSALQMEN 508 (854)
Q Consensus 478 ~~~~l---~~ai~vnP~--d~~~~A~ai~~aL~m~~ 508 (854)
.++.+ ..|+.+++. +.++++++|.++++.+.
T Consensus 121 na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~ 156 (170)
T 2o6l_A 121 NIAHMKARGAAVRVDFNTMSSTDLLNALKRVINDPS 156 (170)
T ss_dssp HHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHcCCeEEeccccCCHHHHHHHHHHHHcCHH
Confidence 23333 337888876 78999999999997653
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0013 Score=80.71 Aligned_cols=166 Identities=16% Similarity=0.164 Sum_probs=102.0
Q ss_pred HHHHhhcCCeEEEEecCC-----CCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeec
Q 003042 577 ASAYNKTNSRLILLDYDG-----TVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAE 651 (854)
Q Consensus 577 ~~~y~~~~~klI~~DlDG-----TLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liae 651 (854)
.+.|.+...|.+++=++. +++..-.....+-+++.++++++ ++.|++++++||........+.. ++|+...
T Consensus 502 ~~~~a~~G~RvL~vA~~~~e~~l~~lGli~i~Dp~R~ea~~aI~~l-~~aGI~v~MiTGD~~~TA~aIA~---~lGI~~~ 577 (920)
T 1mhs_A 502 VAEFATRGFRSLGVARKRGEGSWEILGIMPCMDPPRHDTYKTVCEA-KTLGLSIKMLTGDAVGIARETSR---QLGLGTN 577 (920)
T ss_dssp HHHHHTSSCCCCEECCCSSSCSCCCCBBCCCCCCCCHHHHHHHHHH-HHHTCEEEEEESSCHHHHHHHHH---HHTSSCS
T ss_pred HHHHHhCCCEEEEEEEeccccccEEEEEEEEeccccccHHHHHHHH-hhcCceEEEEcCCCHHHHHHHHH---HcCCCcc
Confidence 344555556777766543 55542224567889999999998 89999999999999999888874 4555310
Q ss_pred CcEEEEECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcC
Q 003042 652 HGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLAN 731 (854)
Q Consensus 652 nG~~I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~ 731 (854)
. ...... ...|. ...+.+ + +.+.+.+
T Consensus 578 ~----~~~~~~--------------------------~~~g~-------------~~~~~~-------e----l~~~~~~ 603 (920)
T 1mhs_A 578 I----YNAERL--------------------------GLGGG-------------GDMPGS-------E----VYDFVEA 603 (920)
T ss_dssp C----CCSSSS--------------------------SSCBC-------------CCGGGG-------G----GGTTTTT
T ss_pred c----cCccce--------------------------eecCc-------------ccCCHH-------H----HHHHHhh
Confidence 0 000000 00010 000000 0 0111111
Q ss_pred CCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecC
Q 003042 732 EPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ 811 (854)
Q Consensus 732 ~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~ 811 (854)
. .-+.++.|. +|...++.+.+. | +.|+++||+.||.+|++.|+. +|++|+
T Consensus 604 ~-------~V~arv~P~--~K~~iV~~Lq~~----g---~~Vam~GDGvNDapaLk~Adv--------------GIAmg~ 653 (920)
T 1mhs_A 604 A-------DGFAEVFPQ--HKYNVVEILQQR----G---YLVAMTGDGVNDAPSLKKADT--------------GIAVEG 653 (920)
T ss_dssp T-------SCEESCCST--HHHHHHHHHHTT----T---CCCEECCCCGGGHHHHHHSSE--------------EEEETT
T ss_pred C-------eEEEEeCHH--HHHHHHHHHHhC----C---CeEEEEcCCcccHHHHHhCCc--------------Cccccc
Confidence 1 123345554 799999988653 4 579999999999999999984 788886
Q ss_pred C----CcccceEeC--CHhHHHHHH
Q 003042 812 K----PSMAKYYLD--DTAEVINLL 830 (854)
Q Consensus 812 ~----~s~A~y~l~--~~~eV~~~L 830 (854)
. +..|++++. +...+.+.+
T Consensus 654 gtd~ak~aADiVl~~~~~~~I~~ai 678 (920)
T 1mhs_A 654 SSDAARSAADIVFLAPGLGAIIDAL 678 (920)
T ss_dssp SCHHHHHSSSEEESSCCSHHHHHHH
T ss_pred ccHHHHHhcCeEEcCCCHHHHHHHH
Confidence 4 467899884 444554444
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0064 Score=66.94 Aligned_cols=149 Identities=9% Similarity=0.013 Sum_probs=82.7
Q ss_pred CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEE
Q 003042 326 KIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIV 405 (854)
Q Consensus 326 ~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~ 405 (854)
..+++..|++...+.-....+|++++ +.-. ++.++.+++. .+++.+++... ..+. .+.
T Consensus 181 ~~ilv~gGs~g~~~~~~~~~~al~~l----~~~~-~~~vi~~~G~-----~~~~~~~~~~~----~~~~--------~~~ 238 (365)
T 3s2u_A 181 VNLLVLGGSLGAEPLNKLLPEALAQV----PLEI-RPAIRHQAGR-----QHAEITAERYR----TVAV--------EAD 238 (365)
T ss_dssp CEEEECCTTTTCSHHHHHHHHHHHTS----CTTT-CCEEEEECCT-----TTHHHHHHHHH----HTTC--------CCE
T ss_pred cEEEEECCcCCccccchhhHHHHHhc----cccc-ceEEEEecCc-----cccccccceec----cccc--------ccc
Confidence 45666667777666555555665544 3222 2334434321 12233333322 2111 122
Q ss_pred EEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcccc------
Q 003042 406 IIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS------ 479 (854)
Q Consensus 406 ~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~------ 479 (854)
+ .+++ +++..+|+.||++|.. -| +.+..|+++|+ -|.|+.-+.+..
T Consensus 239 v-~~f~--~dm~~~l~~aDlvI~r---aG-~~Tv~E~~a~G---------------------~P~Ilip~p~~~~~~Q~~ 290 (365)
T 3s2u_A 239 V-APFI--SDMAAAYAWADLVICR---AG-ALTVSELTAAG---------------------LPAFLVPLPHAIDDHQTR 290 (365)
T ss_dssp E-ESCC--SCHHHHHHHCSEEEEC---CC-HHHHHHHHHHT---------------------CCEEECC-----CCHHHH
T ss_pred c-ccch--hhhhhhhccceEEEec---CC-cchHHHHHHhC---------------------CCeEEeccCCCCCcHHHH
Confidence 2 2332 5799999999998854 35 46778999994 366666554432
Q ss_pred --ccC---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhcccccc
Q 003042 480 --PSL---SGAIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYISSH 525 (854)
Q Consensus 480 --~~l---~~ai~vnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 525 (854)
+.+ ..|++++.. +.++++++|.++|.+|+. ++.+.++.++....+
T Consensus 291 NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~-~~~m~~~a~~~~~~~ 342 (365)
T 3s2u_A 291 NAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPET-LRSMADQARSLAKPE 342 (365)
T ss_dssp HHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCTHH-HHHHHHHHHHTCCTT
T ss_pred HHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCHHH-HHHHHHHHHhcCCcc
Confidence 223 236777655 478999999999998854 334444445444333
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.011 Score=64.93 Aligned_cols=124 Identities=10% Similarity=0.019 Sum_probs=78.8
Q ss_pred CCEEEEEecCcccc-------CCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccC
Q 003042 325 GKIVILGVDDMDLF-------KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFG 397 (854)
Q Consensus 325 ~~~iil~VdRld~~-------KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~ 397 (854)
...+++++|++... +.+...++|++++ +++ ++.++. +++.+++ .. +.
T Consensus 210 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~~----~~~~~g-----~~~~~~l----~~----~~---- 263 (384)
T 2p6p_A 210 RQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DVE----LIVAAP-----DTVAEAL----RA----EV---- 263 (384)
T ss_dssp SCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TCE----EEEECC-----HHHHHHH----HH----HC----
T ss_pred CCEEEEECCCCCccccccccHHHHHHHHHHHhcC-----CcE----EEEEeC-----CCCHHhh----CC----CC----
Confidence 35688999999875 6677788887542 222 443331 1222222 11 10
Q ss_pred CCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcc
Q 003042 398 KPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG 477 (854)
Q Consensus 398 ~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 477 (854)
. .+. + +.+++. .+|..||+||..+ | ..+..|||+|+ -|+|+.-..+
T Consensus 264 -~---~v~-~-~~~~~~---~~l~~~d~~v~~~---G-~~t~~Ea~~~G---------------------~P~v~~p~~~ 309 (384)
T 2p6p_A 264 -P---QAR-V-GWTPLD---VVAPTCDLLVHHA---G-GVSTLTGLSAG---------------------VPQLLIPKGS 309 (384)
T ss_dssp -T---TSE-E-ECCCHH---HHGGGCSEEEECS---C-TTHHHHHHHTT---------------------CCEEECCCSH
T ss_pred -C---ceE-E-cCCCHH---HHHhhCCEEEeCC---c-HHHHHHHHHhC---------------------CCEEEccCcc
Confidence 0 133 4 667654 5689999999753 4 45789999993 4777776543
Q ss_pred ----ccccC---CCceEeCCC--CHHHHHHHHHHHhcCCH
Q 003042 478 ----CSPSL---SGAIRVNPW--NVDAVADAMDSALQMEN 508 (854)
Q Consensus 478 ----~~~~l---~~ai~vnP~--d~~~~A~ai~~aL~m~~ 508 (854)
.++.+ ..|+.+++. +.++++++|.++|+.+.
T Consensus 310 dq~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~ 349 (384)
T 2p6p_A 310 VLEAPARRVADYGAAIALLPGEDSTEAIADSCQELQAKDT 349 (384)
T ss_dssp HHHHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCHH
T ss_pred cchHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCHH
Confidence 33333 347888775 78999999999998653
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0062 Score=63.44 Aligned_cols=69 Identities=16% Similarity=0.202 Sum_probs=56.0
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCC-cccHHHHHHhhh-hcCCCCCCCCccEEEEEecCC-----CcccceEeCCHh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDD-RSDEDMFESIEQ-AVADPSVPGIAEVFACTVGQK-----PSMAKYYLDDTA 824 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs-~ND~~Mf~~ag~-~~~~~~~~~~~~~~aV~vG~~-----~s~A~y~l~~~~ 824 (854)
+...+..+++.+ |++++++++|||+ .+|+.+.+.+|. . ++.|..+.. ...|+|++++..
T Consensus 178 ~p~~~~~~~~~~---~~~~~~~~~vGDs~~~Di~~A~~aG~~~-----------~i~v~~~~~~~~~~~~~~~~~i~~~~ 243 (260)
T 2gfh_A 178 APSIFYHCCDLL---GVQPGDCVMVGDTLETDIQGGLNAGLKA-----------TVWINKSGRVPLTSSPMPHYMVSSVL 243 (260)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHTTCSE-----------EEEECTTCCCCSSCCCCCSEEESSGG
T ss_pred CHHHHHHHHHHc---CCChhhEEEECCCchhhHHHHHHCCCce-----------EEEEcCCCCCcCcccCCCCEEECCHH
Confidence 577899999999 9999999999996 999999999996 2 234443321 246899999999
Q ss_pred HHHHHHHHHH
Q 003042 825 EVINLLEGLA 834 (854)
Q Consensus 825 eV~~~L~~l~ 834 (854)
++..+|..+.
T Consensus 244 el~~~l~~~~ 253 (260)
T 2gfh_A 244 ELPALLQSID 253 (260)
T ss_dssp GHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999988765
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.0033 Score=77.08 Aligned_cols=171 Identities=15% Similarity=0.173 Sum_probs=104.1
Q ss_pred HHHHHHHHhhcCCeEEEEecC-------------CCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhh
Q 003042 573 MHHIASAYNKTNSRLILLDYD-------------GTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNW 639 (854)
Q Consensus 573 ~~~i~~~y~~~~~klI~~DlD-------------GTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~ 639 (854)
+....+.|.+...|.+++=++ .|++..-.....+-+++.++++++ ++.|++++++||........+
T Consensus 443 ~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l-~~aGI~v~MiTGD~~~tA~~i 521 (885)
T 3b8c_A 443 VLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIGKET 521 (885)
T ss_dssp HHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHHHHH-HHTTCCCEEEESSCHHHHTHH
T ss_pred HHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEEEEeecccchhHHHHHHHH-HHcCCcEEEEcCCChHHHHHH
Confidence 455566677777888888764 233321112346789999999998 899999999999999988888
Q ss_pred hcCCcccceeecCcEEEEECCCcceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHH
Q 003042 640 FSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAK 719 (854)
Q Consensus 640 ~~~~~~l~liaenG~~I~~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~ 719 (854)
.. ++|+.... .+ ...+ .|...+. ..+. ....
T Consensus 522 A~---~lGi~~~~-----~~-~~~l--------------------------~g~~~~~----------~~~~----~~l~ 552 (885)
T 3b8c_A 522 GR---RLGMGTNM-----YP-SSAL--------------------------LGTHKDA----------NLAS----IPVE 552 (885)
T ss_dssp HH---TTTCTTCC-----ST-TSSC--------------------------CBGGGGT----------TSCC----SCHH
T ss_pred HH---HhCCcccc-----CC-ccee--------------------------ecccccc----------ccch----hHHH
Confidence 74 44542110 00 0000 0100000 0000 0011
Q ss_pred HHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCC
Q 003042 720 ELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVP 799 (854)
Q Consensus 720 el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~ 799 (854)
++ +.+. .-+.++.|. +|...++.+.+. | +.|+++||+.||.+|++.|+.
T Consensus 553 ~~-------~~~~-------~v~arv~P~--~K~~iV~~lq~~----g---~~Vam~GDGvNDapaLk~Adv-------- 601 (885)
T 3b8c_A 553 EL-------IEKA-------DGFAGVFPE--HKYEIVKKLQER----K---HIVGMTGDGVNDAPALKKADI-------- 601 (885)
T ss_dssp HH-------HHTS-------CCEECCCHH--HHHHHHHHHHHT----T---CCCCBCCCSSTTHHHHHHSSS--------
T ss_pred HH-------HhhC-------cEEEEECHH--HHHHHHHHHHHC----C---CeEEEEcCCchhHHHHHhCCE--------
Confidence 11 1111 112345554 799999998763 4 579999999999999999986
Q ss_pred CCccEEEEEecCC----CcccceEeCC--HhHHHHHH
Q 003042 800 GIAEVFACTVGQK----PSMAKYYLDD--TAEVINLL 830 (854)
Q Consensus 800 ~~~~~~aV~vG~~----~s~A~y~l~~--~~eV~~~L 830 (854)
++++|+. +..|++++.+ ...+.+.+
T Consensus 602 ------GIAmg~gtd~ak~aADivl~~~~~~~I~~ai 632 (885)
T 3b8c_A 602 ------GIAVADATDAARGASDIVLTEPGLSVIISAV 632 (885)
T ss_dssp ------CCCCSSSHHHHGGGCSSCCSSCSHHHHTHHH
T ss_pred ------eEEeCCccHHHHHhcceeeccCchhHHHHHH
Confidence 5667753 4678888743 45554443
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=95.80 E-value=0.0055 Score=60.65 Aligned_cols=30 Identities=17% Similarity=0.083 Sum_probs=22.9
Q ss_pred HHHHHhhCCCCCCeEEEEeCCccc----HHHHH-Hhhh
Q 003042 759 LISTMRSRGKSPDFVLCIGDDRSD----EDMFE-SIEQ 791 (854)
Q Consensus 759 ll~~l~~~gi~~d~vlaiGDs~ND----~~Mf~-~ag~ 791 (854)
+++.+ |++++++++|||+.+| +...+ .+|.
T Consensus 122 ~~~~~---~~~~~~~~~vgDs~~dD~~~i~~A~~~aG~ 156 (193)
T 2i7d_A 122 FVERI---ILTRDKTVVLGDLLIDDKDTVRGQEETPSW 156 (193)
T ss_dssp HHTTE---EECSCGGGBCCSEEEESSSCCCSSCSSCSS
T ss_pred HHHHc---CCCcccEEEECCchhhCcHHHhhccccccc
Confidence 35666 8999999999999999 65555 4444
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=95.19 E-value=0.047 Score=59.97 Aligned_cols=103 Identities=10% Similarity=0.045 Sum_probs=63.2
Q ss_pred EEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecC-----cccc
Q 003042 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF-----IGCS 479 (854)
Q Consensus 405 ~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~-----~G~~ 479 (854)
+.+.+.+++. .+++.||++|..+ |. .+..|+++++ .|+|+.-. .+.+
T Consensus 283 v~~~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G---------------------~P~v~~p~~~~~q~~~a 334 (402)
T 3ia7_A 283 VEAHQWIPFH---SVLAHARACLTHG---TT-GAVLEAFAAG---------------------VPLVLVPHFATEAAPSA 334 (402)
T ss_dssp EEEESCCCHH---HHHTTEEEEEECC---CH-HHHHHHHHTT---------------------CCEEECGGGCGGGHHHH
T ss_pred EEEecCCCHH---HHHhhCCEEEECC---CH-HHHHHHHHhC---------------------CCEEEeCCCcccHHHHH
Confidence 3455667665 8899999998765 33 4668999983 36664433 2333
Q ss_pred ccC---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHH
Q 003042 480 PSL---SGAIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQ 536 (854)
Q Consensus 480 ~~l---~~ai~vnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 536 (854)
+.+ ..|+.+++. +.+++++++.++|+.+.. ++...+...+........+-++.+.+
T Consensus 335 ~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~ 395 (402)
T 3ia7_A 335 ERVIELGLGSVLRPDQLEPASIREAVERLAADSAV-RERVRRMQRDILSSGGPARAADEVEA 395 (402)
T ss_dssp HHHHHTTSEEECCGGGCSHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHcCCEEEccCCCCCHHHHHHHHHHHHcCHHH-HHHHHHHHHHHhhCChHHHHHHHHHH
Confidence 333 236788776 889999999999987632 22222222333334455554444433
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=95.11 E-value=0.012 Score=60.14 Aligned_cols=65 Identities=15% Similarity=0.193 Sum_probs=48.8
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----Cc-ccceEeCCHhH
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PS-MAKYYLDDTAE 825 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s-~A~y~l~~~~e 825 (854)
.|..+ ++.+ |++++++++|||+.+|+.+++.+|.. ++.+|.. .. .|++++++..+
T Consensus 151 ~K~~~----~~~~---~~~~~~~~~vGDs~~Di~~a~~aG~~-------------~~~~~~~~~~~~~~~~~~~~~~~~e 210 (236)
T 2fea_A 151 CKPSV----IHEL---SEPNQYIIMIGDSVTDVEAAKLSDLC-------------FARDYLLNECREQNLNHLPYQDFYE 210 (236)
T ss_dssp CHHHH----HHHH---CCTTCEEEEEECCGGGHHHHHTCSEE-------------EECHHHHHHHHHTTCCEECCSSHHH
T ss_pred cHHHH----HHHH---hccCCeEEEEeCChHHHHHHHhCCee-------------eechHHHHHHHHCCCCeeecCCHHH
Confidence 45544 4556 89999999999999999999999863 2333321 12 37889999999
Q ss_pred HHHHHHHHHh
Q 003042 826 VINLLEGLAT 835 (854)
Q Consensus 826 V~~~L~~l~~ 835 (854)
+.++|..+.+
T Consensus 211 l~~~l~~~~~ 220 (236)
T 2fea_A 211 IRKEIENVKE 220 (236)
T ss_dssp HHHHHHTSHH
T ss_pred HHHHHHHhHH
Confidence 9999887644
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=95.04 E-value=0.044 Score=61.56 Aligned_cols=124 Identities=10% Similarity=-0.003 Sum_probs=75.0
Q ss_pred CEEEEEecCcccc-----CCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 003042 326 KIVILGVDDMDLF-----KGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPG 400 (854)
Q Consensus 326 ~~iil~VdRld~~-----KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~ 400 (854)
..|+++.|++... |.+...++|+..+ ++ .+|.++... +.++++ .
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~----~~v~~~g~~-----~~~~l~-----------------~ 316 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DA----EIIATFDAQ-----QLEGVA-----------------N 316 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----SS----EEEECCCTT-----TTSSCS-----------------S
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----CC----EEEEEECCc-----chhhhc-----------------c
Confidence 4688999999864 8888888887543 22 244333211 111110 1
Q ss_pred CccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcc---
Q 003042 401 YEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG--- 477 (854)
Q Consensus 401 ~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G--- 477 (854)
..+-+.+.+.+++. .+|..||++|. +-|. .+..|+++|+ -|+|+.-+.+
T Consensus 317 ~~~~v~~~~~~~~~---~ll~~ad~~V~---~~G~-~t~~Ea~~~G---------------------~P~i~~p~~~dQ~ 368 (441)
T 2yjn_A 317 IPDNVRTVGFVPMH---ALLPTCAATVH---HGGP-GSWHTAAIHG---------------------VPQVILPDGWDTG 368 (441)
T ss_dssp CCSSEEECCSCCHH---HHGGGCSEEEE---CCCH-HHHHHHHHTT---------------------CCEEECCCSHHHH
T ss_pred CCCCEEEecCCCHH---HHHhhCCEEEE---CCCH-HHHHHHHHhC---------------------CCEEEeCCcccHH
Confidence 11234566678764 46899999996 3454 5789999993 4777776643
Q ss_pred -ccccC---CCceEeCCC--CHHHHHHHHHHHhcCCH
Q 003042 478 -CSPSL---SGAIRVNPW--NVDAVADAMDSALQMEN 508 (854)
Q Consensus 478 -~~~~l---~~ai~vnP~--d~~~~A~ai~~aL~m~~ 508 (854)
.++.+ ..|+.+++. +.++++++|.++|+.+.
T Consensus 369 ~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~ 405 (441)
T 2yjn_A 369 VRAQRTQEFGAGIALPVPELTPDQLRESVKRVLDDPA 405 (441)
T ss_dssp HHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHcCCEEEcccccCCHHHHHHHHHHHhcCHH
Confidence 23333 347888875 78999999999998653
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=94.90 E-value=0.066 Score=59.29 Aligned_cols=100 Identities=10% Similarity=-0.036 Sum_probs=60.6
Q ss_pred EEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecC----cccccc
Q 003042 406 IIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEF----IGCSPS 481 (854)
Q Consensus 406 ~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~----~G~~~~ 481 (854)
.+.+.+++. .++..||++|..+ |.| +..|+++++ .|+|+--. ...+..
T Consensus 300 ~~~~~~~~~---~ll~~ad~~v~~~---G~~-t~~Ea~~~G---------------------~P~v~~p~~~~q~~~a~~ 351 (415)
T 3rsc_A 300 EAHRWVPHV---KVLEQATVCVTHG---GMG-TLMEALYWG---------------------RPLVVVPQSFDVQPMARR 351 (415)
T ss_dssp EEESCCCHH---HHHHHEEEEEESC---CHH-HHHHHHHTT---------------------CCEEECCCSGGGHHHHHH
T ss_pred EEEecCCHH---HHHhhCCEEEECC---cHH-HHHHHHHhC---------------------CCEEEeCCcchHHHHHHH
Confidence 345667765 7888899988765 443 668999983 36666322 223333
Q ss_pred C---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHH
Q 003042 482 L---SGAIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSI 534 (854)
Q Consensus 482 l---~~ai~vnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~ 534 (854)
+ ..|+.+++. +.++++++|.++|+.+.. ++...+...+........+.++.+
T Consensus 352 l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i 408 (415)
T 3rsc_A 352 VDQLGLGAVLPGEKADGDTLLAAVGAVAADPAL-LARVEAMRGHVRRAGGAARAADAV 408 (415)
T ss_dssp HHHHTCEEECCGGGCCHHHHHHHHHHHHTCHHH-HHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHcCCEEEcccCCCCHHHHHHHHHHHHcCHHH-HHHHHHHHHHHHhcCHHHHHHHHH
Confidence 3 336778775 889999999999987542 222222223333334444444433
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=94.82 E-value=0.0042 Score=64.79 Aligned_cols=51 Identities=18% Similarity=0.335 Sum_probs=38.0
Q ss_pred cCCeEEEEecCCCCCCCCC-----------------------CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCcc
Q 003042 583 TNSRLILLDYDGTVMPQTS-----------------------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKD 634 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~-----------------------~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~ 634 (854)
.+..+|+||+||||++... ....+-+.+.+.|+.| ++.|+.++|+|||+..
T Consensus 56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L-~~~G~ki~ivTgR~~~ 129 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYV-NSHNGKVFYVTNRKDS 129 (262)
T ss_dssp TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHH-HHTTEEEEEEEEEETT
T ss_pred CCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHH-HHCCCeEEEEeCCCcc
Confidence 4567999999999998320 0112335667788888 7889999999999764
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=94.75 E-value=0.0052 Score=64.02 Aligned_cols=50 Identities=20% Similarity=0.377 Sum_probs=37.6
Q ss_pred CCeEEEEecCCCCCCCCC-----------------------CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCcc
Q 003042 584 NSRLILLDYDGTVMPQTS-----------------------EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKD 634 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~-----------------------~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~ 634 (854)
+.++++||+||||++... ....+-+.+.+.|+.| ++.|+.++|+|||+..
T Consensus 57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L-~~~G~~i~ivTgR~~~ 129 (260)
T 3pct_A 57 KKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYV-NANGGTMFFVSNRRDD 129 (260)
T ss_dssp -CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHH-HHTTCEEEEEEEEETT
T ss_pred CCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHH-HHCCCeEEEEeCCCcc
Confidence 346999999999997310 0122346778889998 8899999999999765
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=94.31 E-value=0.082 Score=58.29 Aligned_cols=97 Identities=8% Similarity=-0.049 Sum_probs=59.0
Q ss_pred EEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEE----ecCcccc-
Q 003042 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIV----SEFIGCS- 479 (854)
Q Consensus 405 ~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~----Se~~G~~- 479 (854)
+.+.+.++ ...++..||+||.. |-..+..|||+|+ -|+|+ .+-.+.+
T Consensus 285 v~~~~~~~---~~~ll~~ad~~v~~----~G~~t~~Eal~~G---------------------~P~v~~p~~~dq~~~a~ 336 (398)
T 3oti_A 285 VRAVGWTP---LHTLLRTCTAVVHH----GGGGTVMTAIDAG---------------------IPQLLAPDPRDQFQHTA 336 (398)
T ss_dssp EEEESSCC---HHHHHTTCSEEEEC----CCHHHHHHHHHHT---------------------CCEEECCCTTCCSSCTT
T ss_pred EEEEccCC---HHHHHhhCCEEEEC----CCHHHHHHHHHhC---------------------CCEEEcCCCchhHHHHH
Confidence 44556665 45567789999843 3335789999993 46776 5556666
Q ss_pred -ccC---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHH
Q 003042 480 -PSL---SGAIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSI 534 (854)
Q Consensus 480 -~~l---~~ai~vnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~ 534 (854)
+.+ ..|+.+++. +.++++ ++|+.+. .|+...+...+......+...++.+
T Consensus 337 ~~~~~~~g~g~~~~~~~~~~~~l~----~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l 392 (398)
T 3oti_A 337 REAVSRRGIGLVSTSDKVDADLLR----RLIGDES-LRTAAREVREEMVALPTPAETVRRI 392 (398)
T ss_dssp HHHHHHHTSEEECCGGGCCHHHHH----HHHHCHH-HHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHCCCEEeeCCCCCCHHHHH----HHHcCHH-HHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 666 347888776 455555 6776543 3333344444455556666555443
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=93.55 E-value=0.036 Score=61.32 Aligned_cols=54 Identities=22% Similarity=0.309 Sum_probs=44.4
Q ss_pred CCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC---------CcccceEeCCHhHHHHHHHH
Q 003042 768 KSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK---------PSMAKYYLDDTAEVINLLEG 832 (854)
Q Consensus 768 i~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~---------~s~A~y~l~~~~eV~~~L~~ 832 (854)
++++++++|||+.+|+.+.+.+|.. +++|..|.. ...|++++++..++..+|+.
T Consensus 313 v~p~e~l~VGDs~~Di~aAk~AG~~-----------~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~eL~~~l~~ 375 (384)
T 1qyi_A 313 VNKDDVFIVGDSLADLLSAQKIGAT-----------FIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDN 375 (384)
T ss_dssp SCTTTEEEEESSHHHHHHHHHHTCE-----------EEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHSC
T ss_pred CCCcCeEEEcCCHHHHHHHHHcCCE-----------EEEECCCccccccHHHHhhcCCCEEECCHHHHHHHHHH
Confidence 7899999999999999999999973 466776642 13689999999998877743
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=92.12 E-value=0.04 Score=55.78 Aligned_cols=69 Identities=6% Similarity=0.059 Sum_probs=47.9
Q ss_pred cchHHHHHHHHHHHhhCCCCCCeEEEEeCCcc---cHHHHHHhhhhcCCCCCCCCccEEEEEecCC--C------c-ccc
Q 003042 750 VSKGIVVKNLISTMRSRGKSPDFVLCIGDDRS---DEDMFESIEQAVADPSVPGIAEVFACTVGQK--P------S-MAK 817 (854)
Q Consensus 750 vsKg~al~~ll~~l~~~gi~~d~vlaiGDs~N---D~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~--~------s-~A~ 817 (854)
..|...++.+++ |++++++++|||+.+ |+...+.+|. .++.|.+|.. + . .|+
T Consensus 146 ~~K~~~~~~~~~-----~~~~~~~~~vgDs~~d~~di~~A~~aG~-----------~~i~v~~g~~~~~~~~l~~~~~~~ 209 (231)
T 2p11_A 146 IHKELMLDQVME-----CYPARHYVMVDDKLRILAAMKKAWGARL-----------TTVFPRQGHYAFDPKEISSHPPAD 209 (231)
T ss_dssp SSGGGCHHHHHH-----HSCCSEEEEECSCHHHHHHHHHHHGGGE-----------EEEEECCSSSSSCHHHHHHSCCCS
T ss_pred CChHHHHHHHHh-----cCCCceEEEEcCccchhhhhHHHHHcCC-----------eEEEeCCCCCCCcchhccccCCCc
Confidence 356656665554 578999999999999 5555555665 2466777632 1 1 389
Q ss_pred eEeCCHhHHHHHHHHHH
Q 003042 818 YYLDDTAEVINLLEGLA 834 (854)
Q Consensus 818 y~l~~~~eV~~~L~~l~ 834 (854)
+++++..++.++|..+.
T Consensus 210 ~~i~~~~el~~~l~~~~ 226 (231)
T 2p11_A 210 VTVERIGDLVEMDAEWL 226 (231)
T ss_dssp EEESSGGGGGGCGGGGC
T ss_pred eeecCHHHHHHHHHHHH
Confidence 99999999887776554
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=91.83 E-value=0.099 Score=54.33 Aligned_cols=60 Identities=12% Similarity=0.127 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC------cccceEeCCHhHH
Q 003042 753 GIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP------SMAKYYLDDTAEV 826 (854)
Q Consensus 753 g~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~------s~A~y~l~~~~eV 826 (854)
....+.+++.+ |++|+++++|||+.+|+...+.+|.. ++.|..+... ..+++++++..++
T Consensus 190 p~~~~~~~~~l---g~~p~~~l~VgDs~~di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~i~~l~el 255 (261)
T 1yns_A 190 SESYRKIADSI---GCSTNNILFLTDVTREASAAEEADVH-----------VAVVVRPGNAGLTDDEKTYYSLITSFSEL 255 (261)
T ss_dssp HHHHHHHHHHH---TSCGGGEEEEESCHHHHHHHHHTTCE-----------EEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred HHHHHHHHHHh---CcCcccEEEEcCCHHHHHHHHHCCCE-----------EEEEeCCCCCcccccccCCCEEECCHHHh
Confidence 47788999999 99999999999999999999999973 3444433221 3467777776654
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=91.64 E-value=0.66 Score=55.59 Aligned_cols=176 Identities=13% Similarity=0.089 Sum_probs=103.5
Q ss_pred CCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccE
Q 003042 325 GKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPI 404 (854)
Q Consensus 325 ~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv 404 (854)
+..++.+..++. |=-+..+..+.++|++-|+-+ |++...+. .....+++. +.+ +|.. -.-+
T Consensus 522 ~~v~f~~fN~~~--Ki~p~~~~~W~~IL~~vP~S~----L~Ll~~~~----~~~~~l~~~----~~~----~gi~-~~r~ 582 (723)
T 4gyw_A 522 DAIVYCNFNQLY--KIDPSTLQMWANILKRVPNSV----LWLLRFPA----VGEPNIQQY----AQN----MGLP-QNRI 582 (723)
T ss_dssp TSEEEECCSCGG--GCCHHHHHHHHHHHHHCSSEE----EEEEETTG----GGHHHHHHH----HHH----TTCC-GGGE
T ss_pred CCEEEEeCCccc--cCCHHHHHHHHHHHHhCCCCe----EEEEeCcH----HHHHHHHHH----HHh----cCCC-cCeE
Confidence 455666666554 446788999999999999754 66665432 111223332 222 3322 1235
Q ss_pred EEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcccccc-CC
Q 003042 405 VIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS-LS 483 (854)
Q Consensus 405 ~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~-l~ 483 (854)
+ |.+..+.++..+.|+.+||++-|--+-| +.+..||+.+ |++|+|--+....+ +.
T Consensus 583 ~-f~~~~~~~~~l~~~~~~Di~LDt~p~~g-~tT~~eal~~----------------------GvPvvt~~g~~~~sR~~ 638 (723)
T 4gyw_A 583 I-FSPVAPKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWA----------------------GTPMVTMPGETLASRVA 638 (723)
T ss_dssp E-EEECCCHHHHHHHGGGCSEEECCSSSCC-SHHHHHHHHT----------------------TCCEEBCCCSSGGGTHH
T ss_pred E-ECCCCCHHHHHHHhCCCeEEeCCCCcCC-HHHHHHHHHc----------------------CCCEEEccCCCccHhHH
Confidence 4 4456899999999999999999998877 6788899998 45555533221110 00
Q ss_pred Cce--------EeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccc---cChHHHHHHHHHHHHHHHHhc
Q 003042 484 GAI--------RVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISS---HDVAYWAKSIDQDLERACRDH 545 (854)
Q Consensus 484 ~ai--------~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~---~~~~~W~~~~l~~l~~~~~~~ 545 (854)
.++ +| -.|.++..+.-.++-+.++.. ....+++++.+.+ +|...|+++|-..+...++..
T Consensus 639 ~s~l~~~gl~e~i-a~~~~~Y~~~a~~la~d~~~l-~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r~ 709 (723)
T 4gyw_A 639 ASQLTCLGCLELI-AKNRQEYEDIAVKLGTDLEYL-KKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEHY 709 (723)
T ss_dssp HHHHHHHTCGGGB-CSSHHHHHHHHHHHHHCHHHH-HHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCcccc-cCCHHHHHHHHHHHhcCHHHH-HHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHHH
Confidence 011 12 234555444333333444433 3333333333322 688999998888888777654
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=91.40 E-value=0.51 Score=52.21 Aligned_cols=122 Identities=11% Similarity=0.060 Sum_probs=74.7
Q ss_pred CCEEEEEecCc-cccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCcc
Q 003042 325 GKIVILGVDDM-DLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (854)
Q Consensus 325 ~~~iil~VdRl-d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~p 403 (854)
...++++.|++ +..|.+...++|++++ + .+ ++.+.... . .+ . ....+
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~----~-~~----~v~~~g~~--~-~~---~-----------------~~~~~ 285 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH----G-RR----VILSRGWA--D-LV---L-----------------PDDGA 285 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT----T-CC----EEECTTCT--T-CC---C-----------------SSCGG
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC----C-Ce----EEEEeCCC--c-cc---c-----------------cCCCC
Confidence 35688999999 6888888888888654 2 22 33332211 0 00 0 00112
Q ss_pred EEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcc----cc
Q 003042 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG----CS 479 (854)
Q Consensus 404 v~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~ 479 (854)
-+.+.+.+++.+ ++..||+||.. -|. .+..|+++++ -|+|+.-+.+ -+
T Consensus 286 ~v~~~~~~~~~~---~l~~~d~~v~~---~G~-~t~~Ea~~~G---------------------~P~i~~p~~~dQ~~na 337 (415)
T 1iir_A 286 DCFAIGEVNHQV---LFGRVAAVIHH---GGA-GTTHVAARAG---------------------APQILLPQMADQPYYA 337 (415)
T ss_dssp GEEECSSCCHHH---HGGGSSEEEEC---CCH-HHHHHHHHHT---------------------CCEEECCCSTTHHHHH
T ss_pred CEEEeCcCChHH---HHhhCCEEEeC---CCh-hHHHHHHHcC---------------------CCEEECCCCCccHHHH
Confidence 244667788765 47999999964 455 5788999993 4677665543 22
Q ss_pred ccC---CCceEeCCC--CHHHHHHHHHHHhcCC
Q 003042 480 PSL---SGAIRVNPW--NVDAVADAMDSALQME 507 (854)
Q Consensus 480 ~~l---~~ai~vnP~--d~~~~A~ai~~aL~m~ 507 (854)
..+ ..|+.+++. +.++++++|.++ +.+
T Consensus 338 ~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~ 369 (415)
T 1iir_A 338 GRVAELGVGVAHDGPIPTFDSLSAALATA-LTP 369 (415)
T ss_dssp HHHHHHTSEEECSSSSCCHHHHHHHHHHH-TSH
T ss_pred HHHHHCCCcccCCcCCCCHHHHHHHHHHH-cCH
Confidence 223 346777653 789999999999 653
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=90.19 E-value=0.19 Score=52.08 Aligned_cols=60 Identities=15% Similarity=0.179 Sum_probs=44.9
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEe-cCCC--c-ccceEeCCHhH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTV-GQKP--S-MAKYYLDDTAE 825 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~v-G~~~--s-~A~y~l~~~~e 825 (854)
.......+++++ |++|+++++|||+.+|+...+.+|.. ++.|.. |..+ . .+.+++++..+
T Consensus 189 ~p~~~~~a~~~l---g~~p~~~l~vgDs~~di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~i~~l~e 252 (253)
T 2g80_A 189 ETQSYANILRDI---GAKASEVLFLSDNPLELDAAAGVGIA-----------TGLASRPGNAPVPDGQKYQVYKNFET 252 (253)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHTTTCE-----------EEEECCTTSCCCCSSCCSCEESCSTT
T ss_pred CHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHcCCE-----------EEEEcCCCCCCcccccCCCccCChhh
Confidence 467888889999 99999999999999999999999973 345544 3322 1 25667766543
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=89.83 E-value=1.2 Score=49.12 Aligned_cols=75 Identities=7% Similarity=0.018 Sum_probs=51.6
Q ss_pred EEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcc----cccc
Q 003042 406 IIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG----CSPS 481 (854)
Q Consensus 406 ~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~ 481 (854)
.+.+.+++. .+|..||+||.. -|. .+..|+++++ -|+|+.-+.+ -+..
T Consensus 308 ~~~~~~~~~---~~l~~~d~~v~~---~G~-~t~~Ea~~~G---------------------~P~i~~p~~~dQ~~na~~ 359 (424)
T 2iya_A 308 EVHQWVPQL---DILTKASAFITH---AGM-GSTMEALSNA---------------------VPMVAVPQIAEQTMNAER 359 (424)
T ss_dssp EEESSCCHH---HHHTTCSEEEEC---CCH-HHHHHHHHTT---------------------CCEEECCCSHHHHHHHHH
T ss_pred EEecCCCHH---HHHhhCCEEEEC---Cch-hHHHHHHHcC---------------------CCEEEecCccchHHHHHH
Confidence 455667765 689999998754 354 4788999983 4777665543 1222
Q ss_pred C---CCceEeCCC--CHHHHHHHHHHHhcCCH
Q 003042 482 L---SGAIRVNPW--NVDAVADAMDSALQMEN 508 (854)
Q Consensus 482 l---~~ai~vnP~--d~~~~A~ai~~aL~m~~ 508 (854)
+ ..|+.+++. +.++++++|.++|+.++
T Consensus 360 l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~ 391 (424)
T 2iya_A 360 IVELGLGRHIPRDQVTAEKLREAVLAVASDPG 391 (424)
T ss_dssp HHHTTSEEECCGGGCCHHHHHHHHHHHHHCHH
T ss_pred HHHCCCEEEcCcCCCCHHHHHHHHHHHHcCHH
Confidence 2 336777664 78999999999998653
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=88.05 E-value=0.1 Score=52.73 Aligned_cols=32 Identities=16% Similarity=0.324 Sum_probs=20.7
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHc
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDL 617 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L 617 (854)
.++|+|+||+||||++ +.........++++++
T Consensus 9 ~~~k~viFDlDGTL~d---s~~~~~~~~~~~~~~~ 40 (231)
T 2p11_A 9 PHDIVFLFDCDNTLLD---NDHVLADLRAHMMREF 40 (231)
T ss_dssp CCSEEEEECCBTTTBC---HHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEcCCCCCEe---cHHHHHHHHHHHHHHc
Confidence 3578999999999999 4333333334444444
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=87.52 E-value=2.5 Score=46.42 Aligned_cols=137 Identities=12% Similarity=0.021 Sum_probs=79.6
Q ss_pred CCEEEEEecCcc-ccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCcc
Q 003042 325 GKIVILGVDDMD-LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEP 403 (854)
Q Consensus 325 ~~~iil~VdRld-~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~p 403 (854)
.+.|+++.|++. ..+.+...++|++++ +++ +|..+...... . .+..+
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~----vv~~~g~~~~~-----~------------------~~~~~ 268 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRR----VVLSSGWAGLG-----R------------------IDEGD 268 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCC----EEEECTTTTCC-----C------------------SSCCT
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCE----EEEEeCCcccc-----c------------------ccCCC
Confidence 456888999998 666677777777653 233 33333221000 0 00112
Q ss_pred EEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcccc----
Q 003042 404 IVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCS---- 479 (854)
Q Consensus 404 v~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~---- 479 (854)
-+.+.+.+++. .++..||++|-.+ |. .+..|+++++ -|+|+--+.|-.
T Consensus 269 ~v~~~~~~~~~---~ll~~~d~~v~~g---G~-~t~~Eal~~G---------------------vP~v~~p~~~dQ~~na 320 (404)
T 3h4t_A 269 DCLVVGEVNHQ---VLFGRVAAVVHHG---GA-GTTTAVTRAG---------------------APQVVVPQKADQPYYA 320 (404)
T ss_dssp TEEEESSCCHH---HHGGGSSEEEECC---CH-HHHHHHHHHT---------------------CCEEECCCSTTHHHHH
T ss_pred CEEEecCCCHH---HHHhhCcEEEECC---cH-HHHHHHHHcC---------------------CCEEEcCCcccHHHHH
Confidence 23444667764 4667999998554 44 3567999983 366665444321
Q ss_pred ccC---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHhccccc
Q 003042 480 PSL---SGAIRVNPW--NVDAVADAMDSALQMENQEKILRHEKHYKYISS 524 (854)
Q Consensus 480 ~~l---~~ai~vnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 524 (854)
..+ ..|+.+++. +.+++++++.++|+ + + .+.+.++..+.+..
T Consensus 321 ~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~-~-~-~~~~~~~~~~~~~~ 367 (404)
T 3h4t_A 321 GRVADLGVGVAHDGPTPTVESLSAALATALT-P-G-IRARAAAVAGTIRT 367 (404)
T ss_dssp HHHHHHTSEEECSSSSCCHHHHHHHHHHHTS-H-H-HHHHHHHHHTTCCC
T ss_pred HHHHHCCCEeccCcCCCCHHHHHHHHHHHhC-H-H-HHHHHHHHHHHHhh
Confidence 112 336666653 68999999999997 4 3 33444455444444
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=87.44 E-value=0.21 Score=48.36 Aligned_cols=50 Identities=10% Similarity=-0.043 Sum_probs=36.0
Q ss_pred CeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecC-CCcccceEeCCHhHHHHHHHHHH
Q 003042 771 DFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ-KPSMAKYYLDDTAEVINLLEGLA 834 (854)
Q Consensus 771 d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~-~~s~A~y~l~~~~eV~~~L~~l~ 834 (854)
+.+++|||+.+|+. .++| .+++|..+. ....+.+.+++..|+..+|+.+.
T Consensus 129 ~~~l~ieDs~~~i~--~aaG------------~~i~~~~~~~~~~~~~~~i~~~~el~~~l~~~~ 179 (180)
T 3bwv_A 129 LADYLIDDNPKQLE--IFEG------------KSIMFTASHNVYEHRFERVSGWRDVKNYFNSIE 179 (180)
T ss_dssp CCSEEEESCHHHHH--HCSS------------EEEEECCGGGTTCCSSEEECSHHHHHHHHHHHC
T ss_pred cccEEecCCcchHH--HhCC------------CeEEeCCCcccCCCCceecCCHHHHHHHHHHhh
Confidence 56899999999974 3343 246665542 23567899999999999887653
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=86.77 E-value=0.12 Score=53.47 Aligned_cols=32 Identities=19% Similarity=0.386 Sum_probs=21.7
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHc
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDL 617 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L 617 (854)
+++|+|+||+||||++ +...+.....++++.+
T Consensus 16 ~~~k~viFDlDGTLvd---s~~~~~~a~~~~~~~~ 47 (260)
T 2gfh_A 16 SRVRAVFFDLDNTLID---TAGASRRGMLEVIKLL 47 (260)
T ss_dssp CCCCEEEECCBTTTBC---HHHHHHHHHHHHHHHH
T ss_pred ccceEEEEcCCCCCCC---CHHHHHHHHHHHHHHH
Confidence 4689999999999999 4433334444555543
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.42 E-value=0.24 Score=49.14 Aligned_cols=57 Identities=9% Similarity=0.070 Sum_probs=38.1
Q ss_pred hcCCeEEEEecCCCCCCCCCCCC--------------------CCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhh
Q 003042 582 KTNSRLILLDYDGTVMPQTSEDK--------------------RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~~~--------------------~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~ 640 (854)
..+++.+++||||||+....... ..-+.+.+.|+.+ .+. +.++|+|+-....+..++
T Consensus 25 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l-~~~-~~i~I~Tss~~~~a~~vl 101 (195)
T 2hhl_A 25 DYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRM-GQL-FECVLFTASLAKYADPVA 101 (195)
T ss_dssp GTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHH-HHH-SEEEEECSSCHHHHHHHH
T ss_pred cCCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHH-HcC-CeEEEEcCCCHHHHHHHH
Confidence 35689999999999997321000 1235666777777 333 777888877777776666
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=86.00 E-value=1.5 Score=48.39 Aligned_cols=137 Identities=9% Similarity=0.015 Sum_probs=79.2
Q ss_pred CCEEEEEecCcc---ccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCC
Q 003042 325 GKIVILGVDDMD---LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGY 401 (854)
Q Consensus 325 ~~~iil~VdRld---~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~ 401 (854)
...|+++.|++. ..|.+...++|++.+ +++ ++++++... .+ . ...
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~---~v~~~g~~~----~~---~------------~~~----- 284 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ-----GRR---VILSRGWTE----LV---L------------PDD----- 284 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT-----TCC---EEEECTTTT----CC---C------------SCC-----
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC-----CCe---EEEEeCCcc----cc---c------------cCC-----
Confidence 356888999984 566677777777543 222 223333211 00 0 001
Q ss_pred ccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcc----
Q 003042 402 EPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIG---- 477 (854)
Q Consensus 402 ~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G---- 477 (854)
.+-+.+.+.+++.+ +|..||+||. +-|.| +..|+++|+ -|+|+--+.+
T Consensus 285 ~~~v~~~~~~~~~~---ll~~~d~~v~---~~G~~-t~~Ea~~~G---------------------~P~i~~p~~~dQ~~ 336 (416)
T 1rrv_A 285 RDDCFAIDEVNFQA---LFRRVAAVIH---HGSAG-TEHVATRAG---------------------VPQLVIPRNTDQPY 336 (416)
T ss_dssp CTTEEEESSCCHHH---HGGGSSEEEE---CCCHH-HHHHHHHHT---------------------CCEEECCCSBTHHH
T ss_pred CCCEEEeccCChHH---HhccCCEEEe---cCChh-HHHHHHHcC---------------------CCEEEccCCCCcHH
Confidence 11234556777654 6799999996 45655 889999994 3666654432
Q ss_pred ccccC---CCceEeCC--CCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccc
Q 003042 478 CSPSL---SGAIRVNP--WNVDAVADAMDSALQMENQEKILRHEKHYKYISS 524 (854)
Q Consensus 478 ~~~~l---~~ai~vnP--~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 524 (854)
.+..+ ..|+.+++ .+.++++++|.++ ..+ +.+.+.++..+.+..
T Consensus 337 na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~--~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 337 FAGRVAALGIGVAHDGPTPTFESLSAALTTV-LAP--ETRARAEAVAGMVLT 385 (416)
T ss_dssp HHHHHHHHTSEEECSSSCCCHHHHHHHHHHH-TSH--HHHHHHHHHTTTCCC
T ss_pred HHHHHHHCCCccCCCCCCCCHHHHHHHHHHh-hCH--HHHHHHHHHHHHHhh
Confidence 22233 33677764 5789999999998 643 233344444444433
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=85.05 E-value=0.32 Score=47.65 Aligned_cols=57 Identities=7% Similarity=0.069 Sum_probs=37.3
Q ss_pred hcCCeEEEEecCCCCCCCCCCCC--------------------CCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhh
Q 003042 582 KTNSRLILLDYDGTVMPQTSEDK--------------------RPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~~~--------------------~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~ 640 (854)
..+++.+++|||+||+....... ..-+.+.+.|+++ .+. +.++|+|......+..++
T Consensus 12 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l-~~~-~~i~I~T~~~~~~a~~vl 88 (181)
T 2ght_A 12 DSDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRM-GEL-FECVLFTASLAKYADPVA 88 (181)
T ss_dssp GTTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHH-HHH-SEEEEECSSCHHHHHHHH
T ss_pred cCCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHH-HhC-CCEEEEcCCCHHHHHHHH
Confidence 34679999999999997321000 1245666677776 333 777777777777666665
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=84.53 E-value=0.37 Score=47.37 Aligned_cols=55 Identities=15% Similarity=-0.023 Sum_probs=35.2
Q ss_pred CCCCCeEEEEeCCccc----HHHHH-HhhhhcCCCCCCCCccEEEEEecCCCc---ccce-EeCCH-hHHHHHHHH
Q 003042 767 GKSPDFVLCIGDDRSD----EDMFE-SIEQAVADPSVPGIAEVFACTVGQKPS---MAKY-YLDDT-AEVINLLEG 832 (854)
Q Consensus 767 gi~~d~vlaiGDs~ND----~~Mf~-~ag~~~~~~~~~~~~~~~aV~vG~~~s---~A~y-~l~~~-~eV~~~L~~ 832 (854)
|++++++++|||+.+| +...+ .+|. .++.+..+.... ...+ .+++. +++..+|..
T Consensus 129 ~~~~~~~~~vgDs~~dD~~~~~~a~~~aG~-----------~~i~~~~~~~~~~~~~~~~~~v~~~~~~l~~~l~~ 193 (197)
T 1q92_A 129 VLTRDKTVVSADLLIDDRPDITGAEPTPSW-----------EHVLFTACHNQHLQLQPPRRRLHSWADDWKAILDS 193 (197)
T ss_dssp EECSCSTTSCCSEEEESCSCCCCSCSSCSS-----------EEEEECCTTTTTCCCCTTCEEECCTTSCHHHHHHT
T ss_pred ccCCccEEEECcccccCCchhhhcccCCCc-----------eEEEecCcccccccccccchhhhhHHHHHHHHhcc
Confidence 8889999999999999 75555 5554 234444442211 2234 68887 577777764
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=81.36 E-value=0.39 Score=53.00 Aligned_cols=36 Identities=17% Similarity=0.239 Sum_probs=28.1
Q ss_pred CCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcC
Q 003042 606 PSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG 642 (854)
Q Consensus 606 is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 642 (854)
+.+.+++.++.| ++.|+.|+||||-....++.+...
T Consensus 222 ~~p~~~eLi~~L-~~~G~~v~IVSgg~~~~v~~ia~~ 257 (385)
T 4gxt_A 222 TLDEMVDLYRSL-EENGIDCYIVSASFIDIVRAFATD 257 (385)
T ss_dssp ECHHHHHHHHHH-HHTTCEEEEEEEEEHHHHHHHHHC
T ss_pred eCHHHHHHHHHH-HHCCCeEEEEcCCcHHHHHHHHHH
Confidence 568888888888 788888888888887777777643
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 854 | ||||
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 1e-117 | |
| d1u02a_ | 229 | c.108.1.15 (A:) Trehalose-6-phosphate phosphatase | 7e-34 | |
| d1s2oa1 | 244 | c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 { | 3e-09 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 5e-09 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 2e-08 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 5e-08 | |
| d2amya1 | 243 | c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human ( | 6e-08 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 1e-07 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 1e-07 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 2e-07 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 7e-07 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 4e-06 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 5e-06 | |
| d2fuea1 | 244 | c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human | 2e-04 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 5e-04 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 360 bits (925), Expect = e-117
Identities = 134/489 (27%), Positives = 228/489 (46%), Gaps = 38/489 (7%)
Query: 52 RRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQ 111
R ++V+N++ E ++ G L + + G ++ G ++
Sbjct: 2 RLVVVSNRIAPP--DEHAASAGG-------LAVGIL-GALKAAGGLWFGWSGETG--NED 49
Query: 112 EEVSTILLEKFKCVPTFLPADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQA 171
+ + + L +YY+ F LWP FHY L L +F R W
Sbjct: 50 QPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLV-----QFQRPAWDG 104
Query: 172 YLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIY 231
YL N + ADK++ ++ D D +WIHDYHL+ LRKR ++GFFLH PFP+ EI+
Sbjct: 105 YLRVNALLADKLLPLLQDD-DIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIF 163
Query: 232 RTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSI 291
LP D +L+ L + DL+GF T + FL S + + S + + +G+
Sbjct: 164 NALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHT---AWGKAFRT 220
Query: 292 KILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQL 351
++ P+GI + + + K+ +LK + I V+ +D KG+ +FLA L
Sbjct: 221 EVYPIGIEPKEIAKQAAGPLP-PKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEAL 279
Query: 352 LEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPL 411
LE++P GK+ QI +R + QD+ A IN +G+ G+ P+ + +
Sbjct: 280 LEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHF 339
Query: 412 STQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVII 471
+ + + ++ +V +RDGMNLV +Y ++ P V++
Sbjct: 340 DRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQD----------------PANPGVLV 383
Query: 472 VSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWA 531
+S+F G + L+ A+ VNP++ D VA A+D AL M E+I RH + I +D+ +W
Sbjct: 384 LSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQ 443
Query: 532 KSIDQDLER 540
+ DL++
Sbjct: 444 ECFISDLKQ 452
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 229 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 127 bits (320), Expect = 7e-34
Identities = 51/250 (20%), Positives = 97/250 (38%), Gaps = 31/250 (12%)
Query: 587 LILLDYDGTVMP--QTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE 644
LI LDYDGT++P E+ +LS+++DL + +IV+GR + + +
Sbjct: 2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLK--ERFDTYIVTGRSPEEISRFL--PL 57
Query: 645 KLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVW 704
+ + HG R + + + G I K A+++
Sbjct: 58 DINMICYHGAC-SKINGQIVYNNGSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLY 116
Query: 705 HHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMR 764
H +L +E + V G+ I+E++ GV+KG ++++
Sbjct: 117 HLGLMGAD----MKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRG--- 169
Query: 765 SRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTA 824
+ GDD +DE FE+ + A VG+ + AK+++ D
Sbjct: 170 -----ERPAIIAGDDATDEAAFEANDDA------------LTIKVGEGETHAKFHVADYI 212
Query: 825 EVINLLEGLA 834
E+ +L+ +
Sbjct: 213 EMRKILKFIE 222
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Score = 56.2 bits (134), Expect = 3e-09
Identities = 34/214 (15%), Positives = 63/214 (29%), Gaps = 20/214 (9%)
Query: 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKN--AVFIVSGRGKDS---LGNWF 640
L++ D D T + + L L + D + + +GR S L
Sbjct: 4 LLLISDLDNTWVG--------DQQALEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQV 55
Query: 641 SGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKET 700
+E G + + ++I + + + S +E
Sbjct: 56 GLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGFEALKPQSPLEQNPW 115
Query: 701 AIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLI 760
I +H Q E+L + + V++ PQ +KG
Sbjct: 116 KISYHLDPQACPTVIDQLTEMLKETGIPVQV----IFSSGKDVDLLPQRSNKG---NATQ 168
Query: 761 STMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVA 794
+ P L GD +D +FE+ + V
Sbjct: 169 YLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVI 202
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 55.4 bits (132), Expect = 5e-09
Identities = 34/209 (16%), Positives = 70/209 (33%), Gaps = 21/209 (10%)
Query: 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEK 645
RL +D DG + T D+ ST+ + + V ++SG + ++
Sbjct: 4 RLAAIDVDGNL---TDRDRLISTKAIESIRSA-EKKGLTVSLLSGN---VIPVVYALKIF 56
Query: 646 LGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWH 705
LG+ +G + ++ + F E ++ ++ T I
Sbjct: 57 LGI---NGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSI--------LT 105
Query: 706 HQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRS 765
++ + G E +D++ + V+ + + +G K V
Sbjct: 106 NRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNK---LKEM 162
Query: 766 RGKSPDFVLCIGDDRSDEDMFESIEQAVA 794
D +L IGD +D MF+ +
Sbjct: 163 YSLEYDEILVIGDSNNDMPMFQLPVRKAC 191
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 53.9 bits (128), Expect = 2e-08
Identities = 33/209 (15%), Positives = 65/209 (31%), Gaps = 19/209 (9%)
Query: 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEK 645
+ I +D DGT+ T ++ + L + + +V+G
Sbjct: 3 KAISIDIDGTI---TYPNRMIHEKALEAIRRA-ESLGIPIMLVTGNTVQFAEAAS---IL 55
Query: 646 LGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWH 705
+G S + + + L + + + K + + D+ +V
Sbjct: 56 IGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIM 115
Query: 706 HQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRS 765
+ + EL N +V + VK ++KG +
Sbjct: 116 RETINVETVREIINEL---------NLNLVAVDSGFAIHVKKPWINKG---SGIEKASEF 163
Query: 766 RGKSPDFVLCIGDDRSDEDMFESIEQAVA 794
G P V +GD +D D F+ + VA
Sbjct: 164 LGIKPKEVAHVGDGENDLDAFKVVGYKVA 192
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 52.7 bits (125), Expect = 5e-08
Identities = 43/236 (18%), Positives = 74/236 (31%), Gaps = 35/236 (14%)
Query: 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS--GV 643
R+ + D DGT+ +++ S + + L K V SGR S N
Sbjct: 3 RVFVFDLDGTL---LNDNLEISEKDRRNIEKLSR--KCYVVFASGRMLVSTLNVEKKYFK 57
Query: 644 EKLGLSAEHG-----------YFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDG 692
A +G + A +I + + A LY+E +
Sbjct: 58 RTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNE 117
Query: 693 SFIEDKETAIVWHHQHADPHFGS----------CQAKELLDHLENVLANEP----VVVKR 738
+ V + + E LD L+ +L+ V K
Sbjct: 118 EIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKS 177
Query: 739 GQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVA 794
+E+ P+ V KG ++ + ++ GD+ +D MFE VA
Sbjct: 178 FPTYLEIVPKNVDKGKALRF---LRERMNWKKEEIVVFGDNENDLFMFEEAGLRVA 230
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.3 bits (124), Expect = 6e-08
Identities = 28/240 (11%), Positives = 61/240 (25%), Gaps = 39/240 (16%)
Query: 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGR-------------G 632
L L D DGT+ ++ + E+ L L K + +V G
Sbjct: 4 ALCLFDVDGTLTA---PRQKITKEMDDFLQKLRQ--KIKIGVVGGSDFEKVQEQLGNDVV 58
Query: 633 KDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDF--------DWKEIAEPVMK 684
+ + + + + ++ + ++
Sbjct: 59 EKYDYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIE 118
Query: 685 LYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVE 744
+ S I + + + + K + D + GQ +
Sbjct: 119 FRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFD 178
Query: 745 VKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRS----DEDMFESIE---QAVADPS 797
V P G K ++++ + GD D ++F +V P
Sbjct: 179 VFPDGWDKRYCLRHVE------NDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPE 232
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 51.9 bits (123), Expect = 1e-07
Identities = 44/243 (18%), Positives = 80/243 (32%), Gaps = 44/243 (18%)
Query: 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEK 645
+LI +D DGT+ D S V + + V + +GR + N+ ++
Sbjct: 5 KLIAIDMDGTL---LLPDHTISPAVKNAIAAARAR-GVNVVLTTGRPYAGVHNYL---KE 57
Query: 646 LGLSAEHGYF-------------------TRWSKNSAWEICSLTRDFDWKEIAEPVMKLY 686
L + Y T S + + L+R+ A LY
Sbjct: 58 LHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLY 117
Query: 687 TETTDGSFIE------DKETAIVWHHQHADPHF---------GSCQAKELLDHLENVLAN 731
T D S+ + + DP+ + + + +
Sbjct: 118 TANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKE 177
Query: 732 EPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791
+ V+K + +E+ + V+KG + S G P+ ++ IGD +D M E
Sbjct: 178 KYTVLKSAPYFLEILDKRVNKG---TGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGV 234
Query: 792 AVA 794
VA
Sbjct: 235 GVA 237
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 51.3 bits (121), Expect = 1e-07
Identities = 29/226 (12%), Positives = 52/226 (23%), Gaps = 22/226 (9%)
Query: 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKL 646
L+ D DGT+ L L + V + S + + +
Sbjct: 6 LVFSDLDGTL---LDSHSYDWQPAAPWLTRL-REANVPVILCSSKTSAEMLYLQKTLGLQ 61
Query: 647 GLSAEH----GYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAI 702
GL + EI+ + L + D
Sbjct: 62 GLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFDDVDDA 121
Query: 703 VWHHQHADPH--------------FGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQ 748
+ E + L + +G V
Sbjct: 122 TIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLDA 181
Query: 749 GVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVA 794
K +I+T + L +GD +D + E ++ AV
Sbjct: 182 SAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVI 227
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 51.2 bits (121), Expect = 2e-07
Identities = 33/253 (13%), Positives = 78/253 (30%), Gaps = 40/253 (15%)
Query: 576 IASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS 635
+ A + +L+L+D+DGT+ +D + +E + + + + V I +GR K
Sbjct: 1 VEEALKGADIKLLLIDFDGTLF--VDKDIKVPSENIDAIKEA-IEKGYMVSICTGRSKVG 57
Query: 636 -------LGNWFSGVEKLGLSAEHGYFTRWSKNSAWEICSLTRDF-----DWKEIAEPVM 683
+ +G ++ D + V
Sbjct: 58 ILSAFGEENLKKMNFYGMPGVYINGTIVYDQIGYTLLDETIETDVYAELISYLVEKNLVN 117
Query: 684 KLYTETTDGSFIEDKETAIVWHHQHADPHFG----------------------SCQAKEL 721
+ + +++ + + + + ++K +
Sbjct: 118 QTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLMIVLDPSESKTV 177
Query: 722 LDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRS 781
+ +L+ N+ + EV G K + ++ S D VL +GD +
Sbjct: 178 IGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINY---LLKHYNISNDQVLVVGDAEN 234
Query: 782 DEDMFESIEQAVA 794
D M + + + A
Sbjct: 235 DIAMLSNFKYSFA 247
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 49.2 bits (116), Expect = 7e-07
Identities = 33/234 (14%), Positives = 66/234 (28%), Gaps = 31/234 (13%)
Query: 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEK 645
++I+ D DGT + ++ +L + SG L ++F ++
Sbjct: 3 KVIVTDMDGTFL--NDAKTYNQPRFMAQYQELKKRG-IKFVVASGNQYYQLISFFPELKD 59
Query: 646 LGLSAEHGYFTRWSKNSAWEICSLTRDFDWKEIAE----PVMKLYTETTDGSFIEDKET- 700
+ LTR I E + +++ +
Sbjct: 60 EISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPE 119
Query: 701 --------------------AIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQ 740
I + Q ++D L L V G
Sbjct: 120 AFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGF 179
Query: 741 HIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVA 794
+++ G+ K + ++ SP V+ IGD +D +M + + A
Sbjct: 180 GFIDLIIPGLHKANGISR---LLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFA 230
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 46.8 bits (110), Expect = 4e-06
Identities = 30/232 (12%), Positives = 69/232 (29%), Gaps = 28/232 (12%)
Query: 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE 644
++ + D DGT++ + E R + + L + +FI +GR K + N +
Sbjct: 1 TKALFFDIDGTLV--SFETHRIPSSTIEALEAA-HAKGLKIFIATGRPKAIINNLSELQD 57
Query: 645 KLGLSAE-------------HGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTD 691
+ + Y + + + + I + +
Sbjct: 58 RNLIDGYITMNGAYCFVGEEVIYKSAIPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPN 117
Query: 692 G-------SFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLAN--EPVVVKRGQHI 742
F+ V + ++ + + VL + + +
Sbjct: 118 EMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVLPSIPTCEIGRWYPAF 177
Query: 743 VEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVA 794
+V +G +K + + +R G + + GD +D M VA
Sbjct: 178 ADVTAKGDTKQKGIDEI---IRHFGIKLEETMSFGDGGNDISMLRHAAIGVA 226
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 46.9 bits (110), Expect = 5e-06
Identities = 44/262 (16%), Positives = 82/262 (31%), Gaps = 63/262 (24%)
Query: 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEK 645
+LI +D DGT+ + + S E + L D V + +GR + + F E
Sbjct: 2 KLIAIDLDGTL---LNSKHQVSLENENALRQAQRD-GIEVVVSTGRAHFDVMSIF---EP 54
Query: 646 LGLSA---------------EHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETT 690
LG+ + K A++I S ++ +YT
Sbjct: 55 LGIKTWVISANGAVIHDPEGRLYHHETIDKKRAYDILSWLESENYYYEVFTGSAIYTPQN 114
Query: 691 DGSFIE---------DKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPV------- 734
++ + E + Q A+ + + E A+EP+
Sbjct: 115 GRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAYINSFQELFEADEPIDFYNILG 174
Query: 735 ----------------------VVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDF 772
+V +H E+ + SKG + L + +
Sbjct: 175 FSFFKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKG---QALKRLAKQLNIPLEE 231
Query: 773 VLCIGDDRSDEDMFESIEQAVA 794
+GD +D+ M E+ + VA
Sbjct: 232 TAAVGDSLNDKSMLEAAGKGVA 253
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.6 bits (96), Expect = 2e-04
Identities = 37/241 (15%), Positives = 64/241 (26%), Gaps = 41/241 (17%)
Query: 587 LILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDS-LGNWFSGVEK 645
L L D DGT+ P ++ EV + L L + + + +V G G E
Sbjct: 3 LCLFDVDGTLTP---ARQKIDPEVAAFLQKLRS--RVQIGVVGGSDYCKIAEQLGDGDEV 57
Query: 646 LGLSA----------EHGYFTRWSKNSAWEICSLTRDFDWKEIAEPVMKLYTETTDGSFI 695
+ + + + L G+FI
Sbjct: 58 IEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFI 117
Query: 696 EDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEP------------VVVKRGQHIV 743
E + + LD E + + G
Sbjct: 118 EFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMISF 177
Query: 744 EVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRS----DEDMFESIEQ---AVADP 796
+V P+G K + +L S D + G++ S D ++F +V P
Sbjct: 178 DVFPEGWDKRYCLDSLD------QDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSP 231
Query: 797 S 797
Sbjct: 232 Q 232
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 40.4 bits (93), Expect = 5e-04
Identities = 28/227 (12%), Positives = 54/227 (23%), Gaps = 27/227 (11%)
Query: 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEK 645
RLI LD D T++ + P+ ++ L D+ + S + + + +E
Sbjct: 3 RLIFLDIDKTLI--PGYEPDPAKPIIEELKDMGF----EIIFNSSKTRAEQEYYRKELEV 56
Query: 646 LGLSAEH--GYFTRWSKNSAWEICSLTRDFDW-------KEIAEPVMKLYTETTDGSFIE 696
+++ E +K +
Sbjct: 57 ETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYYG 116
Query: 697 DKETAIVWHHQHADPHFGSCQAKELLD---------HLENVLANEPVVVKRGQHIVEVKP 747
+ + P + E VL V G V
Sbjct: 117 NSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGWEEVLVEGGFKVTMGSRFYTVHG 176
Query: 748 QGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVA 794
L + +GD +D MFE +++
Sbjct: 177 NSDKGKAAKILL---DFYKRLGQIESYAVGDSYNDFPMFEVVDKVFI 220
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 854 | |||
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 99.96 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.93 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.93 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.92 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.91 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.9 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.9 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.89 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.89 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.89 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.88 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.85 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.85 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.84 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.83 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.82 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.77 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.75 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.6 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.36 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.02 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.99 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 98.99 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 98.96 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.92 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.67 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 98.66 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 98.59 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 98.54 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 98.4 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 98.4 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 98.35 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.35 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 98.35 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 98.34 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 98.31 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 98.21 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 98.17 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 98.12 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 98.09 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 97.96 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 97.7 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 97.66 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 97.65 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 97.48 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 97.4 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 97.38 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.11 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.1 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 96.95 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 96.61 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.11 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 95.41 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 95.13 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 93.98 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 93.44 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 92.82 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 92.59 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 92.07 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 86.6 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 86.45 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 82.04 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 81.58 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.6e-99 Score=864.01 Aligned_cols=453 Identities=29% Similarity=0.520 Sum_probs=416.8
Q ss_pred CcEEEEEcCCccceEEeCCCCceEEEecCCchhhhhhccCCCCCCeEEEecCCcccCCcchhhHHHhhhcCeeEEEEeCC
Q 003042 51 QRRIIVANQLPVKAYYEKDSNKWGFEYDQDSLYLQLKDGFPLETEVIYVGSLNVEIGVDDQEEVSTILLEKFKCVPTFLP 130 (854)
Q Consensus 51 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~ 130 (854)
+||||||||+|+...+. .++|||+++|.+.+. ..+++||||+|...++++ .+......+|+|+||+|+
T Consensus 1 srlivvsnr~~~~~~~~---------~~~gGl~~al~~~~~-~~~g~Wvgw~g~~~~~~~--~~~~~~~~~~~~~~v~l~ 68 (456)
T d1uqta_ 1 SRLVVVSNRIAPPDEHA---------ASAGGLAVGILGALK-AAGGLWFGWSGETGNEDQ--PLKKVKKGNITWASFNLS 68 (456)
T ss_dssp CCEEEEEEECCCCC-------------CCCHHHHHHHHHHH-HHCEEEEEEEEEESCCSS--CCEEEEETTEEEEEEEEC
T ss_pred CCEEEEECCCCCCCCCC---------CCCccHHHHhHHHHh-hCCCEEEecCCCCCcccc--hhhhhhccCceeEEecCC
Confidence 58999999999977543 356899999987654 579999999997654322 122234578999999999
Q ss_pred hhhhhhhhcccccccccccccccCCCCCCCCCccChhcHHHHHHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHh
Q 003042 131 ADVHKKYYHGFCKHYLWPLFHYMLPLTASHGARFDRGEWQAYLSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRK 210 (854)
Q Consensus 131 ~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~ 210 (854)
+++++.||+||||++|||+|||+++. .+|++++|++|++||++||+++.+.++| +|+||||||||+++|.+||+
T Consensus 69 ~~~~~~~Y~gf~n~~LWpl~H~~~~~-----~~~~~~~~~~Y~~vN~~fA~~l~~~~~~-~d~iwvhDyhl~llp~~lR~ 142 (456)
T d1uqta_ 69 EQDLDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWDGYLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELRK 142 (456)
T ss_dssp HHHHHHHTTTHHHHTHHHHHTTCGGG-----CCCCHHHHHHHHHHHHHHHHHHGGGCCT-TCEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHHHhhhccccccccCcccc-----ccccHHHHHHHHHHHHHHHHHHHHhccC-CCeEEEeccchhhhHHHHHH
Confidence 99999999999999999999999876 5799999999999999999999999997 59999999999999999999
Q ss_pred ccCCCeEEEEecCCCCChhhhhcCCChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEE
Q 003042 211 RFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVS 290 (854)
Q Consensus 211 ~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~ 290 (854)
+.|+++||||+|+|||++++|+++|++++|+++||++|+||||+++|++||+++|.+++++...... .+.+.|+.++
T Consensus 143 ~~~~~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~---~i~~~gr~v~ 219 (456)
T d1uqta_ 143 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAK---SHTAWGKAFR 219 (456)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTT---EEEETTEEEE
T ss_pred hCCCCcEEEEeCCCCCChHHhccCcchHHHHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCC---eEEecCceee
Confidence 9999999999999999999999999999999999999999999999999999999999998865544 4788999999
Q ss_pred EEEeccccCchHHHhhhCCchHHHHHHHHHHHcCCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 003042 291 IKILPVGIHMGQFESIMSLDVTGQKVKELKEKFDGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNP 370 (854)
Q Consensus 291 i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p 370 (854)
+.++|+|||++.|......+ ..+.+.+++++++|+++|++|||+|+.||+..+|+||++||++||+++++++|+|++.|
T Consensus 220 v~~~p~GID~~~~~~~~~~~-~~~~~~~l~~~~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~ 298 (456)
T d1uqta_ 220 TEVYPIGIEPKEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 298 (456)
T ss_dssp EEECCCCCCHHHHHHHHHSC-CCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCB
T ss_pred eeeecCcccchhhhhhcccH-HHHHHHHHHHhcCCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCC
Confidence 99999999999998766544 34556788899999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCC
Q 003042 371 ARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSP 450 (854)
Q Consensus 371 ~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~ 450 (854)
++++.++|.+++.++.+++++||++|+..+|+|++++.+.++++++.++|+.||||++||++||||||++|||||+..
T Consensus 299 ~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p-- 376 (456)
T d1uqta_ 299 SRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP-- 376 (456)
T ss_dssp CSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCT--
T ss_pred cccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999762
Q ss_pred ccccccCCCCCCCCCCCceEEEecCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHH
Q 003042 451 VLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYW 530 (854)
Q Consensus 451 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W 530 (854)
.++|+||+|+++|+++++.+|++|||||++++|+||.+||+||++||+.|+++++++|.+||+.+|
T Consensus 377 --------------~~~g~lIlS~~~G~~~~l~~g~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W 442 (456)
T d1uqta_ 377 --------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHW 442 (456)
T ss_dssp --------------TSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred --------------CCCCcEEEeCCCCCHHHhCCeEEECcCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHH
Confidence 357899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 003042 531 AKSIDQDLERA 541 (854)
Q Consensus 531 ~~~~l~~l~~~ 541 (854)
+++||.+|+++
T Consensus 443 ~~~fl~~l~~~ 453 (456)
T d1uqta_ 443 QECFISDLKQI 453 (456)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHhh
Confidence 99999999874
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.96 E-value=2.6e-28 Score=249.74 Aligned_cols=221 Identities=23% Similarity=0.380 Sum_probs=176.8
Q ss_pred EEEEecCCCCCCCCC--CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcce
Q 003042 587 LILLDYDGTVMPQTS--EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAW 664 (854)
Q Consensus 587 lI~~DlDGTLl~~~~--~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~ 664 (854)
||+||+||||++... +.+.++++++++|++| ++ ++.|+|+|||+...+...+. +..+++++||+.+..++...+
T Consensus 2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~l-~~-~~~v~i~TGR~~~~l~~~~~--~~~~~~~~ng~~~~~~~~~~~ 77 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDL-KE-RFDTYIVTGRSPEEISRFLP--LDINMICYHGACSKINGQIVY 77 (229)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHH-HH-HSEEEEECSSCHHHHHHHSC--SSCEEEEGGGTEEEETTEEEE
T ss_pred EEEEEecCCCCCCCCChhhCCCCHHHHHHHHHH-hh-CCCEEEEcCCCHHHhhhhcC--ccccEEecCeEEEecCCceee
Confidence 799999999997432 3557999999999999 44 67899999999999887764 355788999999888765444
Q ss_pred EEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEE
Q 003042 665 EICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVE 744 (854)
Q Consensus 665 ~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vE 744 (854)
. ........+.+.+.+.+..+....++.....+.....+++....+.. ..+..+.+++.+....+.+.++..++|
T Consensus 78 ~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~id 152 (229)
T d1u02a_ 78 N-NGSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYHLGLMGADM----KPKLRSRIEEIARIFGVETYYGKMIIE 152 (229)
T ss_dssp C-TTGGGGHHHHHHHHHHHTTHHHHSTTCEEEEETTEEEEECTTSCSTT----HHHHHHHHHHHHHHHTCEEEECSSEEE
T ss_pred e-cchhhhHHHHHHHHHHhHHhhcccCCceecccccceeeeehhhhhhh----HHHHHHHHHHHhhcCCeEEEeeceEEE
Confidence 3 22233345666666666677777889999888889999887765442 344555556666665678899999999
Q ss_pred EeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCCcccceEeCCHh
Q 003042 745 VKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTA 824 (854)
Q Consensus 745 I~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~s~A~y~l~~~~ 824 (854)
|+|+|+|||.|+++++++ ++++|||||.||++||+.++.+ |+|++|++++.|+|++++++
T Consensus 153 i~p~g~~Kg~al~~l~~~--------~~~i~~GDs~ND~~Mf~~~~~~------------~av~~g~~~~~A~~~~~~~~ 212 (229)
T d1u02a_ 153 LRVPGVNKGSAIRSVRGE--------RPAIIAGDDATDEAAFEANDDA------------LTIKVGEGETHAKFHVADYI 212 (229)
T ss_dssp EECTTCCHHHHHHHHHTT--------SCEEEEESSHHHHHHHHTTTTS------------EEEEESSSCCCCSEEESSHH
T ss_pred EecCCCCHHHHHHHHhcc--------ccceeecCCCChHHHHhccCCe------------EEEEeCCCCccCeEEcCCHH
Confidence 999999999999999753 6899999999999999999875 89999999999999999999
Q ss_pred HHHHHHHHHHhc
Q 003042 825 EVINLLEGLATE 836 (854)
Q Consensus 825 eV~~~L~~l~~~ 836 (854)
||.++|+.|...
T Consensus 213 ev~~~l~~l~~~ 224 (229)
T d1u02a_ 213 EMRKILKFIEML 224 (229)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999888877543
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=2.2e-25 Score=234.88 Aligned_cols=231 Identities=18% Similarity=0.277 Sum_probs=165.8
Q ss_pred CeEEEEecCCCCCCCCCCCCCCC-HHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECCCc
Q 003042 585 SRLILLDYDGTVMPQTSEDKRPS-TEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKNS 662 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~~is-~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~~~ 662 (854)
+|+|+||+||||++ +.+.++ +.++++|++| ++.|+.+++||||+...+.+++..+. ..+++++||+.|..++..
T Consensus 2 IKli~~DlDGTLl~---~~~~~~~~~~~~~l~~l-~~~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~ 77 (269)
T d1rlma_ 2 VKVIVTDMDGTFLN---DAKTYNQPRFMAQYQEL-KKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQ 77 (269)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHH-HHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEE
T ss_pred EEEEEEeCCccCcC---CCCcCChHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCcccceEeeceeEEEECCcE
Confidence 79999999999998 666665 7899999999 78899999999999999999997763 568899999999997765
Q ss_pred ceEEccccccchHHHHHHHHHHHH-----hccCCcceEecccc------------eE--EEeeccCCCc-------cchh
Q 003042 663 AWEICSLTRDFDWKEIAEPVMKLY-----TETTDGSFIEDKET------------AI--VWHHQHADPH-------FGSC 716 (854)
Q Consensus 663 ~~~~~~~~~~~~~~~~v~~~~~~y-----~~~~~g~~ie~k~~------------~l--~~~~~~~d~~-------~~~~ 716 (854)
.+....... .....+..+.+.. ....++.++..... .+ ...+...+.. ....
T Consensus 78 ~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (269)
T d1rlma_ 78 LFHGELTRH--ESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDE 155 (269)
T ss_dssp EEECCCCHH--HHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEECCGG
T ss_pred EEEeccchH--HHHHHHHHHHhhcCceEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhhcchheEEEecCCHH
Confidence 444322111 1111112221110 00112222211100 00 0011111111 1123
Q ss_pred hHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCC
Q 003042 717 QAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADP 796 (854)
Q Consensus 717 ~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~ 796 (854)
+..++.+++...+......+.++..++||+|+++|||.|+++|++++ |++++++++||||.||++||+.+|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~di~p~~~sK~~al~~l~~~l---gi~~~~vi~~GD~~ND~~Ml~~ag~----- 227 (269)
T d1rlma_ 156 QIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRW---DLSPQNVVAIGDSGNDAEMLKMARY----- 227 (269)
T ss_dssp GHHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHCSE-----
T ss_pred HHHHHHHHHHHHhhcceEEEEEcCceEEEecCchHHHHHHHHHhhhh---ccccccEEEEcCCcchHHHHHhCCe-----
Confidence 56667777777777666788889999999999999999999999999 9999999999999999999999985
Q ss_pred CCCCCccEEEEEecCC----CcccceEeCC--HhHHHHHHHHHHhccC
Q 003042 797 SVPGIAEVFACTVGQK----PSMAKYYLDD--TAEVINLLEGLATESV 838 (854)
Q Consensus 797 ~~~~~~~~~aV~vG~~----~s~A~y~l~~--~~eV~~~L~~l~~~~~ 838 (854)
+|+||++ +..|+|++.+ .++|++.|+++.+-..
T Consensus 228 ---------~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~~~l~~~~ 266 (269)
T d1rlma_ 228 ---------SFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTY 266 (269)
T ss_dssp ---------EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHHTCT
T ss_pred ---------EEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHhcCC
Confidence 6888875 5789999975 5669999999987544
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=1.4e-25 Score=236.56 Aligned_cols=231 Identities=18% Similarity=0.261 Sum_probs=155.9
Q ss_pred hcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCC----cccceeecCcEEEE
Q 003042 582 KTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV----EKLGLSAEHGYFTR 657 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~----~~l~liaenG~~I~ 657 (854)
.|.+|+|+||+||||++ .++.+++++.++|++| +++|+.+++||||++..+.+++..+ +..+++++||+.+.
T Consensus 1 ~~~iKli~~DlDGTL~~---~~~~i~~~~~~al~~L-~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~ 76 (271)
T d1rkqa_ 1 SLAIKLIAIDMDGTLLL---PDHTISPAVKNAIAAA-RARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQ 76 (271)
T ss_dssp CCCCCEEEECCCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEE
T ss_pred CCCeeEEEEeCCccccC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEe
Confidence 36799999999999999 7889999999999999 7889999999999999999888654 33457889999887
Q ss_pred ECCCcceEEccccccchHHHHHHHHHHHHh-----ccCCcceEecccce-------------EEEe-eccCCCc--c---
Q 003042 658 WSKNSAWEICSLTRDFDWKEIAEPVMKLYT-----ETTDGSFIEDKETA-------------IVWH-HQHADPH--F--- 713 (854)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~y~-----~~~~g~~ie~k~~~-------------l~~~-~~~~d~~--~--- 713 (854)
............ ........+....+.+. ....+.+....... ..+. ....++. +
T Consensus 77 ~~~~~~~i~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (271)
T d1rkqa_ 77 KAADGSTVAQTA-LSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKV 155 (271)
T ss_dssp ETTTCCEEEECC-BCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEE
T ss_pred ccCCCeEEEeec-ccHHHHHHHHHHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEE
Confidence 654332221111 11111222222222111 01111111111100 0000 0001110 0
Q ss_pred ----chhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHh
Q 003042 714 ----GSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESI 789 (854)
Q Consensus 714 ----~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~a 789 (854)
......+..+.+.+.+.+....+..+..++||.|+++|||.|++.+++++ +++++++++|||+.||++||+.+
T Consensus 156 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~---~i~~~~ii~~GD~~ND~~ml~~~ 232 (271)
T d1rkqa_ 156 MMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVL---GIKPEEIMAIGDQENDIAMIEYA 232 (271)
T ss_dssp EEECCHHHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHS
T ss_pred EEecCHHHHHHHHHHHHHHhhcceEEEEecCceEEecCCCCCcccccceehhhc---ccchhcEEEEeCcHhHHHHHHhC
Confidence 01123344444444444445567788999999999999999999999999 99999999999999999999999
Q ss_pred hhhcCCCCCCCCccEEEEEecCC----CcccceEeCC--HhHHHHHHHHHH
Q 003042 790 EQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDD--TAEVINLLEGLA 834 (854)
Q Consensus 790 g~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~--~~eV~~~L~~l~ 834 (854)
++ +|+||++ +..|+|++.+ .++|++.|+++.
T Consensus 233 ~~--------------~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~~~~ 269 (271)
T d1rkqa_ 233 GV--------------GVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYV 269 (271)
T ss_dssp SE--------------EEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHT
T ss_pred Cc--------------EEEeCCCCHHHHHhCCEEcCCCCcChHHHHHHHHh
Confidence 85 6788886 4789999865 466999998764
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.92 E-value=1.1e-24 Score=229.58 Aligned_cols=224 Identities=19% Similarity=0.185 Sum_probs=157.9
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCC--cccceeecCcEEEEECCC
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV--EKLGLSAEHGYFTRWSKN 661 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~--~~l~liaenG~~I~~~~~ 661 (854)
|+|+|+||+||||++ +++.++++++++|+++ ++ +..++++|||++..+...+... ...+++++||+.|..+++
T Consensus 1 m~Kli~~DlDGTL~~---~~~~i~~~~~~al~~l-~~-~~~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~ 75 (267)
T d1nf2a_ 1 MYRVFVFDLDGTLLN---DNLEISEKDRRNIEKL-SR-KCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEE 75 (267)
T ss_dssp CBCEEEEECCCCCSC---TTSCCCHHHHHHHHHH-TT-TSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTT
T ss_pred CeEEEEEeCCccccC---CcCccCHHHHHHHHHH-Hc-CCEEEEECCCChHHHHHHHHHhcccCCceeccCCeEEEeccc
Confidence 579999999999999 7889999999999999 55 4579999999999888877553 345689999999988765
Q ss_pred cceEEccccccchHHHHHHHHHHHHhccC--------CcceEecccceEEE-------eeccCCCcc-------------
Q 003042 662 SAWEICSLTRDFDWKEIAEPVMKLYTETT--------DGSFIEDKETAIVW-------HHQHADPHF------------- 713 (854)
Q Consensus 662 ~~~~~~~~~~~~~~~~~v~~~~~~y~~~~--------~g~~ie~k~~~l~~-------~~~~~d~~~------------- 713 (854)
...... ....++ +..+.+...+.. ++.+.......+.. .+.. .+.+
T Consensus 76 ~~i~~~--~i~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~ 149 (267)
T d1nf2a_ 76 GVILNE--KIPPEV---AKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRV-EPNLSELVSKMGTTKLL 149 (267)
T ss_dssp EEEEEC--CBCHHH---HHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEE-CTTHHHHHHHHCBSEEE
T ss_pred cccccc--CCCHHH---HHHHHHHHHhcCceEEEeeCceEEecCCcHHHHHHHHhcCCCcee-cCcHHHHhhhccceEEE
Confidence 543221 111122 222222222111 11111110000000 0000 0000
Q ss_pred ---chhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhh
Q 003042 714 ---GSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIE 790 (854)
Q Consensus 714 ---~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag 790 (854)
...+.+++.+.+.+.+.+....+.++..++||+|+++|||.|++++++++ |++++++++|||+.||++||+.+|
T Consensus 150 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~di~~~~~~K~~ai~~l~~~~---~i~~~~vva~GD~~ND~~ml~~~~ 226 (267)
T d1nf2a_ 150 LIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERM---NWKKEEIVVFGDNENDLFMFEEAG 226 (267)
T ss_dssp EECCHHHHHHHHHHHHHHHTTTSEEEEEETTEEEEECTTCCHHHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHTTCS
T ss_pred EeccHHHHHHHHHHHHHhhCCcEEEEEeecceeeecCCCCchhHHHHHHHHhh---ccCcccEEEEcCCcchHHHHHhCC
Confidence 11244566666776666666777889999999999999999999999999 999999999999999999999998
Q ss_pred hhcCCCCCCCCccEEEEEecCC----CcccceEeCC--HhHHHHHHHHHHh
Q 003042 791 QAVADPSVPGIAEVFACTVGQK----PSMAKYYLDD--TAEVINLLEGLAT 835 (854)
Q Consensus 791 ~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~--~~eV~~~L~~l~~ 835 (854)
. +|+||++ +..|+|++.+ .++|+.+|++|..
T Consensus 227 ~--------------sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~~ll~ 263 (267)
T d1nf2a_ 227 L--------------RVAMENAIEKVKEASDIVTLTNNDSGVSYVLERIST 263 (267)
T ss_dssp E--------------EEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBCB
T ss_pred c--------------EEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHh
Confidence 5 7888886 4789999874 5679999988753
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.91 E-value=5.8e-24 Score=225.53 Aligned_cols=223 Identities=18% Similarity=0.209 Sum_probs=150.1
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECCCcc
Q 003042 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKNSA 663 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~~~~ 663 (854)
+|+|+||+||||++ .++.+++++.++|++| +++|+.+++||||++..+.+++..+. ..+++++||+.+..+++..
T Consensus 1 iKli~~DlDGTLl~---~~~~i~~~~~~~l~~l-~~~Gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nG~~i~~~~~~~ 76 (285)
T d1nrwa_ 1 MKLIAIDLDGTLLN---SKHQVSLENENALRQA-QRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRL 76 (285)
T ss_dssp CCEEEEECCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCE
T ss_pred CeEEEEECCccccC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHhCCCcEEEecCceeEEecCCce
Confidence 58999999999999 7889999999999999 78899999999999999999987653 4578999999999876554
Q ss_pred eEEc-cccccchHHHHHHHHHHHHhccCCcceEecc-----------------------------------------cce
Q 003042 664 WEIC-SLTRDFDWKEIAEPVMKLYTETTDGSFIEDK-----------------------------------------ETA 701 (854)
Q Consensus 664 ~~~~-~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k-----------------------------------------~~~ 701 (854)
+... ++. +.+.++++.+............ ...
T Consensus 77 i~~~~i~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (285)
T d1nrwa_ 77 YHHETIDK------KRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSG 150 (285)
T ss_dssp EEECCCCH------HHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCC
T ss_pred eeeccCCH------HHHHHHHHHHHHcCCceEEecCceEEeccccHHHHHHHHHhhhhcCcccchhhhhhhhhhhhcccc
Confidence 4322 211 1111111111110000000000 000
Q ss_pred EEE--eeccC----CCc-cc-----hhhHHHHHHHHHHHhcCCC-EEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCC
Q 003042 702 IVW--HHQHA----DPH-FG-----SCQAKELLDHLENVLANEP-VVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGK 768 (854)
Q Consensus 702 l~~--~~~~~----d~~-~~-----~~~~~el~~~l~~~l~~~~-~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi 768 (854)
... .+... .+. .. ......+............ ..+.++..++||+|+++|||.|++++++++ |+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ldi~~~~~~K~~ai~~l~~~~---gi 227 (285)
T d1nrwa_ 151 FAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQL---NI 227 (285)
T ss_dssp EEECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHHTTCTTEEEECSSTTEEEEEETTCSHHHHHHHHHHHT---TC
T ss_pred ceeechHHHHhhcccchhheeeecccchHHHHHHHHHHhhcCCCeEEEEeCCcEEEEecccchhhhHHHHHHhhc---cc
Confidence 000 00000 000 00 0011222222222222222 345678899999999999999999999999 99
Q ss_pred CCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeCC--HhHHHHHHHHHH
Q 003042 769 SPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDD--TAEVINLLEGLA 834 (854)
Q Consensus 769 ~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~--~~eV~~~L~~l~ 834 (854)
+++++++||||.||++||+.++. +|+|+++ +..|+|++.+ .++|+++|++|+
T Consensus 228 ~~~~vi~~GD~~ND~~Ml~~a~~--------------svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~~ll 285 (285)
T d1nrwa_ 228 PLEETAAVGDSLNDKSMLEAAGK--------------GVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHLL 285 (285)
T ss_dssp CGGGEEEEESSGGGHHHHHHSSE--------------EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHTC
T ss_pred CcccEEEEeCCHHHHHHHHhCCe--------------EEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHhC
Confidence 99999999999999999999985 6888876 4789999875 567999998763
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.90 E-value=8e-24 Score=222.10 Aligned_cols=225 Identities=14% Similarity=0.170 Sum_probs=147.7
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhc--CC-cccceeecCcEEEEECCC
Q 003042 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFS--GV-EKLGLSAEHGYFTRWSKN 661 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~--~~-~~l~liaenG~~I~~~~~ 661 (854)
.|+||||+||||++. ..+.++++++++|+++ ++.|+.|++||||+...+..+.. .. ...+++++||+.++.+++
T Consensus 1 ~k~if~DlDGTL~~~--~~~~i~~~~~~al~~l-~~~gi~v~~~TGR~~~~~~~l~~~~~~~~~~~~I~~nGa~i~~~~~ 77 (260)
T d2rbka1 1 TKALFFDIDGTLVSF--ETHRIPSSTIEALEAA-HAKGLKIFIATGRPKAIINNLSELQDRNLIDGYITMNGAYCFVGEE 77 (260)
T ss_dssp CCEEEECSBTTTBCT--TTSSCCHHHHHHHHHH-HHTTCEEEEECSSCGGGCCSCHHHHHTTCCCEEEEGGGTEEEETTE
T ss_pred CeEEEEECCCCCcCC--CCCCCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHHhcCCCCceEecCCcccccCcc
Confidence 389999999999982 3467999999999999 89999999999999887766532 12 244689999999999876
Q ss_pred cceEEccccccchHHHHHHHHHHHHhc-----cCCcceEecccceEE-E--eeccC--CCc----------cc---hhhH
Q 003042 662 SAWEICSLTRDFDWKEIAEPVMKLYTE-----TTDGSFIEDKETAIV-W--HHQHA--DPH----------FG---SCQA 718 (854)
Q Consensus 662 ~~~~~~~~~~~~~~~~~v~~~~~~y~~-----~~~g~~ie~k~~~l~-~--~~~~~--d~~----------~~---~~~~ 718 (854)
..+...++.. ....+....+.+.. ...+.+......... . .+... .+. .. ....
T Consensus 78 ~i~~~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (260)
T d2rbka1 78 VIYKSAIPQE---EVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFIT 154 (260)
T ss_dssp EEEECCCCHH---HHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECCC
T ss_pred cccccCCCHH---HHHHHHHHHHHcCCcEEEEecCceeeccchHHHHHHHHHhhccCcCcccCHhHhcCcceEEEeecCC
Confidence 5555443321 11112222221110 001111110000000 0 00000 000 00 0001
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCC
Q 003042 719 KELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSV 798 (854)
Q Consensus 719 ~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~ 798 (854)
.+....+.+.+.. .....++..++||.|+++|||.|++++++++ |++++++++||||.||++||+.+|+
T Consensus 155 ~~~~~~~~~~~~~-~~~~~~~~~~~ei~p~~~sK~~al~~l~~~~---~i~~~~~~a~GD~~ND~~Ml~~a~~------- 223 (260)
T d2rbka1 155 EEEEKEVLPSIPT-CEIGRWYPAFADVTAKGDTKQKGIDEIIRHF---GIKLEETMSFGDGGNDISMLRHAAI------- 223 (260)
T ss_dssp HHHHHHHGGGSTT-CEEECSSTTCCEEESTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE-------
T ss_pred HHHHHHHHHHhcc-ccceeecCcEEEEEeCCCCHHHHHHHHHHhc---cccHhheeEecCCcccHHHHHhCCe-------
Confidence 1222222222222 2444567788999999999999999999999 9999999999999999999999985
Q ss_pred CCCccEEEEEecCC----CcccceEeCC--HhHHHHHHHHH
Q 003042 799 PGIAEVFACTVGQK----PSMAKYYLDD--TAEVINLLEGL 833 (854)
Q Consensus 799 ~~~~~~~aV~vG~~----~s~A~y~l~~--~~eV~~~L~~l 833 (854)
+|+||++ +..|+|++.+ .++|+++|+++
T Consensus 224 -------svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~~ 257 (260)
T d2rbka1 224 -------GVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHF 257 (260)
T ss_dssp -------EEECTTSCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred -------EEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHHh
Confidence 6888886 4788998875 57899999876
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.90 E-value=2.2e-23 Score=220.23 Aligned_cols=238 Identities=18% Similarity=0.239 Sum_probs=163.0
Q ss_pred HHHHhhcCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-------cccee
Q 003042 577 ASAYNKTNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-------KLGLS 649 (854)
Q Consensus 577 ~~~y~~~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-------~l~li 649 (854)
.++++.+++|+|+||+||||+.. .++.++++++++|++| +++|+.|+|+|||++..+..+++.+. ..+.+
T Consensus 2 ~~~~~~~~ikli~~DlDGTLl~~--~~~~i~~~~~~al~~l-~~~Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i 78 (283)
T d2b30a1 2 EEALKGADIKLLLIDFDGTLFVD--KDIKVPSENIDAIKEA-IEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGV 78 (283)
T ss_dssp HHHTTTCCCCEEEEETBTTTBCC--TTTCSCHHHHHHHHHH-HHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEE
T ss_pred cccCcccCccEEEEECCCCCcCC--CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCcccccccCCceE
Confidence 46788899999999999999851 4678999999999999 88999999999999999988875431 23356
Q ss_pred ecCcEEEEECCCcceEEccccccc-hHHHHHHHHHHH------HhccCCcceEecccc-------------eEEEeecc-
Q 003042 650 AEHGYFTRWSKNSAWEICSLTRDF-DWKEIAEPVMKL------YTETTDGSFIEDKET-------------AIVWHHQH- 708 (854)
Q Consensus 650 aenG~~I~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~------y~~~~~g~~ie~k~~-------------~l~~~~~~- 708 (854)
+.||+.++...+....... .+. ...+....+... +.......+...... .......+
T Consensus 79 ~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (283)
T d2b30a1 79 YINGTIVYDQIGYTLLDET--IETDVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEM 156 (283)
T ss_dssp EGGGTEEECTTCCEEEECC--CCHHHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHH
T ss_pred EEeeeEEEcCCCcEeeecc--cCHHHHHHHHHHHHhhcccceEEEEecceeEEeccchHHHHHHHHhhccccccccHHHH
Confidence 7788888766544332211 111 112222111110 001111111111100 00000000
Q ss_pred CC-Cc-------cchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCc
Q 003042 709 AD-PH-------FGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDR 780 (854)
Q Consensus 709 ~d-~~-------~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ 780 (854)
.. .. ....+.+++.+.+.+.+......+.++..++||.|+++||+.+++.+++++ +++.+++++||||.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~~l~~l~~~~---~i~~~~vi~~GD~~ 233 (283)
T d2b30a1 157 LKYRTMNKLMIVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHY---NISNDQVLVVGDAE 233 (283)
T ss_dssp TTCCCCSEEEECCCTTTHHHHHHHHHHHSTTTEEEEECTTSCEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSG
T ss_pred hhcccceEEEEecCHHHHHHHHHHHHHHhcccceEEEecceeEeecCCcchhHHHHHHHhhhc---ccccceEEEecCCh
Confidence 00 00 011345677777777777666677788999999999999999999999999 99999999999999
Q ss_pred ccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeCCH---hHHHHHHHHHHhc
Q 003042 781 SDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDDT---AEVINLLEGLATE 836 (854)
Q Consensus 781 ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~~---~eV~~~L~~l~~~ 836 (854)
||++||+.+++ +|+||++ +..|+|++.+. ..|..+|+++.+.
T Consensus 234 ND~~Ml~~a~~--------------~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~~~~~~ 282 (283)
T d2b30a1 234 NDIAMLSNFKY--------------SFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFDL 282 (283)
T ss_dssp GGHHHHHSCSE--------------EEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred hhHHHHHhCCc--------------EEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHHHHHcC
Confidence 99999999985 6788876 47889998642 3589999998764
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.89 E-value=1.7e-22 Score=226.34 Aligned_cols=290 Identities=16% Similarity=0.171 Sum_probs=212.1
Q ss_pred CCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCCh---hhhh------cC--CChHHHHHHhhcCCeEeecCHHHHH
Q 003042 191 EDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSS---EIYR------TL--PVRDEILKSLLNSDLIGFHTFDYAR 259 (854)
Q Consensus 191 ~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~---e~~~------~l--p~r~eil~~ll~~dligf~t~~~~~ 259 (854)
.|+|++|+++..+++.++++. .++++.+.+|..++.. ..+. .. +.....-.+...+|.+...+..++.
T Consensus 121 pDiIh~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~ 199 (437)
T d2bisa1 121 PDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLI 199 (437)
T ss_dssp CSEEEEETGGGHHHHHHHHHH-HCCCEEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESCHHHHH
T ss_pred CCEEEECChhhhhHhhhhhcc-ccCceeEEEeeccccccchhhhhhccchhhhhHHHHHHHHHHHHhhhhhcccchhhhh
Confidence 389999999988777777655 5799999999887632 1111 11 1122334455678999888776654
Q ss_pred HHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHHc--CCCEEEEEecCccc
Q 003042 260 HFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVDDMDL 337 (854)
Q Consensus 260 ~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~iil~VdRld~ 337 (854)
.... .++.. ..++.++|+|+|++.|.+....+........+++++ .++++|+++||++.
T Consensus 200 ~~~~----~~~~~---------------~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~ 260 (437)
T d2bisa1 200 DEWG----FFRNF---------------EGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDR 260 (437)
T ss_dssp HTHH----HHGGG---------------TTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCSCEEEEEESCBCS
T ss_pred hhhh----hhccc---------------cCceEEEecccccccccccccchhhHHHHHhhhhhhhccCCceEEEeecccc
Confidence 4322 11111 114578899999998876655555555556666766 46789999999975
Q ss_pred -cCCHHHHHHHHHHHHHh--CCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChh
Q 003042 338 -FKGISLKFLAMGQLLEQ--HPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQ 414 (854)
Q Consensus 338 -~KGi~~~l~A~~~ll~~--~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~ 414 (854)
.||+..+++|++.+..+ +|+ +.|+.+|.. . +.+....+.+.+ .. ..++++.+.++.+
T Consensus 261 ~~Kg~~~ll~a~~~~~~~~~~~~----~~lvi~G~~---~-~~~~~~~~~~~~-------~~-----~~~~~~~~~~~~~ 320 (437)
T d2bisa1 261 GQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKG---D-PELEGWARSLEE-------KH-----GNVKVITEMLSRE 320 (437)
T ss_dssp SSSCHHHHHHHHHHHTTSGGGGG----EEEEEECCB---C-HHHHHHHHHHHH-------TC-----TTEEEECSCCCHH
T ss_pred cchhHHHHHhhhccccccccccc----ceeeeeccc---c-cccccchhhhcc-------cc-----ccceeccccCcHH
Confidence 79999999999988653 344 558877732 1 222222222221 22 2367788889999
Q ss_pred hHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC--CceEeCCCC
Q 003042 415 DKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--GAIRVNPWN 492 (854)
Q Consensus 415 el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~vnP~d 492 (854)
++..+|+.||++++||..||+|++++|||+| |.|+|+|+.+|..+.+. .|++|+|.|
T Consensus 321 ~~~~~~~~adi~v~~s~~e~~~~~~~Eama~---------------------G~Pvi~~~~g~~~e~i~~~~G~~~~~~d 379 (437)
T d2bisa1 321 FVRELYGSVDFVIIPSYFEPFGLVALEAMCL---------------------GAIPIASAVGGLRDIITNETGILVKAGD 379 (437)
T ss_dssp HHHHHHTTCSEEEECCSCCSSCHHHHHHHTT---------------------TCEEEEESCTTHHHHCCTTTCEEECTTC
T ss_pred HHHHHHhhhccccccccccccchHHHHHHHC---------------------CCCEEEeCCCCcHHhEECCcEEEECCCC
Confidence 9999999999999999999999999999999 45899999988887773 489999999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhccccccChHHHHHHHHHHHHHH
Q 003042 493 VDAVADAMDSALQMENQEKILRHEKHYKYISSHDVAYWAKSIDQDLERA 541 (854)
Q Consensus 493 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 541 (854)
++++|++|.++|.++++.++...+..+++++++|+.++++++++-.+++
T Consensus 380 ~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~ 428 (437)
T d2bisa1 380 PGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGS 428 (437)
T ss_dssp HHHHHHHHHHHHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9999999999998776666777777777888899999999888765554
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.89 E-value=2.4e-22 Score=229.56 Aligned_cols=317 Identities=15% Similarity=0.142 Sum_probs=211.3
Q ss_pred hcHHHHHHHHHHHHHHHHHhc---CCCCCeEEEeCcccchHHHHHH-hccCCCeEEEEecCCCC----ChhhhhcC--C-
Q 003042 167 GEWQAYLSANKVFADKVMEVI---NPDEDYVWIHDYHLMVLPSFLR-KRFHRVKVGFFLHSPFP----SSEIYRTL--P- 235 (854)
Q Consensus 167 ~~w~~Y~~vN~~fa~~i~~~~---~~~~D~vwihDyhl~llp~~lr-~~~~~~~i~~flH~pfP----~~e~~~~l--p- 235 (854)
..|..|...++.++..+.+.. +| |+|++||+|-.+.+.+++ .+.+++++.+++|.... ....+..+ |
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~p--DIvH~h~~~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~ 183 (477)
T d1rzua_ 106 DNWKRFAALSLAAARIGAGVLPGWRP--DMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPA 183 (477)
T ss_dssp THHHHHHHHHHHHHHHHTTCSSSCCC--SEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCG
T ss_pred ccHHHHHHHHHHHHhhhhhcccCCCC--CEEEecchhHHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcch
Confidence 458888888888887665543 35 999999999999998886 45678999999996421 11122111 1
Q ss_pred ------------ChHHHHHHhhcCCeEeecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHH
Q 003042 236 ------------VRDEILKSLLNSDLIGFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQF 303 (854)
Q Consensus 236 ------------~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~ 303 (854)
...-+-.++..+|.+-.-+..|++..+..-. ..+.+.. ...+..++.++|+|||.+.|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~~~-~~~~~~~---------~~~~~~~~~vi~ngv~~~~~ 253 (477)
T d1rzua_ 184 HAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEF-GMGLEGV---------IGSRAHVLHGIVNGIDADVW 253 (477)
T ss_dssp GGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHH-HTTCHHH---------HHTTGGGEEECCCCBCTTTS
T ss_pred hhcccccccccchhHHHHHHHHhhhhhhhccHHHHHHHHHHhc-Ccchhhh---------hhhccccEEEEECCcchhhc
Confidence 1122344667899999988888876643211 0111100 01122356789999999877
Q ss_pred HhhhCC-----------chHHHHHHHHHHHc----CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 003042 304 ESIMSL-----------DVTGQKVKELKEKF----DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQIT 368 (854)
Q Consensus 304 ~~~~~~-----------~~~~~~~~~l~~~~----~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~ 368 (854)
.+.... .......+.++..+ +++++|+++||+++.||+..+++|+++++++++. |+.+|
T Consensus 254 ~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~------l~~~G 327 (477)
T d1rzua_ 254 NPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGR------LVVLG 327 (477)
T ss_dssp CTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCE------EEEEE
T ss_pred cccccccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhhCCe------EEEEe
Confidence 532110 01122233344443 3567999999999999999999999999887543 55555
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecC
Q 003042 369 NPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQG 448 (854)
Q Consensus 369 ~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~ 448 (854)
. |+.. ...++.++..+.+. .+. +.+..+.+++..+|+.||+||+||.+||||+|++|||+|
T Consensus 328 ~---G~~~----~~~~~~~~~~~~~~--------~v~-~~~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~--- 388 (477)
T d1rzua_ 328 A---GDVA----LEGALLAAASRHHG--------RVG-VAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRY--- 388 (477)
T ss_dssp C---BCHH----HHHHHHHHHHHTTT--------TEE-EEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH---
T ss_pred c---CCch----HHHHHHHHHhhcCC--------eEE-EEcccChhHHHHHHHhCccccCCccccCCCHHHHHHHHc---
Confidence 3 2222 22223333333221 133 444578889999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCCCCceEEEecCccccccCC------------CceEeCCCCHHHHHHHHHHHhcC--CHHHHHHH
Q 003042 449 SPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS------------GAIRVNPWNVDAVADAMDSALQM--ENQEKILR 514 (854)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------------~ai~vnP~d~~~~A~ai~~aL~m--~~~er~~r 514 (854)
|.|+|+|..+|..+.+. .|++|+|.|++++|+||.++|+. .++.++..
T Consensus 389 ------------------G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~ 450 (477)
T d1rzua_ 389 ------------------GCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQM 450 (477)
T ss_dssp ------------------TCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred ------------------CCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCCHHHHHHH
Confidence 56999999999998872 47999999999999999999863 33333332
Q ss_pred HHHHhccccccChHHHHHHHHHHHHH
Q 003042 515 HEKHYKYISSHDVAYWAKSIDQDLER 540 (854)
Q Consensus 515 ~~~~~~~v~~~~~~~W~~~~l~~l~~ 540 (854)
.++.. -+.+++..-++++++-.++
T Consensus 451 ~~~a~--~~~fsw~~~a~~~~~lY~~ 474 (477)
T d1rzua_ 451 QKLGM--KSDVSWEKSAGLYAALYSQ 474 (477)
T ss_dssp HHHHH--TCCCBHHHHHHHHHHHHHH
T ss_pred HHHHH--HhhCCHHHHHHHHHHHHHH
Confidence 22222 1358888888877664443
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.89 E-value=6.5e-23 Score=209.48 Aligned_cols=218 Identities=17% Similarity=0.221 Sum_probs=152.3
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCC-cccceeecCcEEEEECCCc
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV-EKLGLSAEHGYFTRWSKNS 662 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~-~~l~liaenG~~I~~~~~~ 662 (854)
|+|+|+||+||||++ +++.+++++.++|++| ++.|+.|+++|||+...+...+..+ ...+++++||+.+...+..
T Consensus 1 kiK~i~~D~DGTL~~---~~~~i~~~~~~~l~~l-~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~ 76 (230)
T d1wr8a_ 1 KIKAISIDIDGTITY---PNRMIHEKALEAIRRA-ESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76 (230)
T ss_dssp CCCEEEEESTTTTBC---TTSCBCHHHHHHHHHH-HHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEE
T ss_pred CceEEEEecCCCCcC---CCCccCHHHHHHHHHH-HhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccc
Confidence 579999999999999 8889999999999999 7889999999999999888876543 2456788999888877554
Q ss_pred ceEEccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeE
Q 003042 663 AWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHI 742 (854)
Q Consensus 663 ~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~ 742 (854)
.+.... ...+ .....+...+...........+...+.+.-... .....+++. +.+.. ......+...
T Consensus 77 ~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~~~~-~~~~~~~~~~ 143 (230)
T d1wr8a_ 77 IFLASM---DEEW-ILWNEIRKRFPNARTSYTMPDRRAGLVIMRETI----NVETVREII----NELNL-NLVAVDSGFA 143 (230)
T ss_dssp EESCCC---SHHH-HHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTS----CHHHHHHHH----HHTTC-SCEEEECSSC
T ss_pred cccccc---cHHH-HHHHHHHHhcccccceeecccceeeEEEecccc----cHHHHHHHH----HHhcc-ceEEeeCCcE
Confidence 432211 1111 112223333332211111122222222211111 111122222 22322 3456777889
Q ss_pred EEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----Ccccce
Q 003042 743 VEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKY 818 (854)
Q Consensus 743 vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y 818 (854)
+|++|++++|+.+++.+++++ |++++++++|||+.||++||+.+|. +|+||++ +..|+|
T Consensus 144 iei~~~~~~K~~al~~l~~~~---~i~~~~~~~iGD~~NDi~ml~~ag~--------------~vav~na~~~~k~~A~~ 206 (230)
T d1wr8a_ 144 IHVKKPWINKGSGIEKASEFL---GIKPKEVAHVGDGENDLDAFKVVGY--------------KVAVAQAPKILKENADY 206 (230)
T ss_dssp EEEECTTCCHHHHHHHHHHHH---TSCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHHHHTTCSE
T ss_pred EEEeeCCcCcchhhccccccc---ccchhheeeeecCccHHHHHHHCCe--------------EEEECCCCHHHHHhCCE
Confidence 999999999999999999999 9999999999999999999999985 6888876 478999
Q ss_pred EeCC--HhHHHHHHHHHHh
Q 003042 819 YLDD--TAEVINLLEGLAT 835 (854)
Q Consensus 819 ~l~~--~~eV~~~L~~l~~ 835 (854)
++++ .++|++.|..+..
T Consensus 207 v~~~~~~~gv~~~i~~~l~ 225 (230)
T d1wr8a_ 207 VTKKEYGEGGAEAIYHILE 225 (230)
T ss_dssp ECSSCHHHHHHHHHHHHHH
T ss_pred EECCCCcCHHHHHHHHHHH
Confidence 9965 4678888887764
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.88 E-value=7.5e-23 Score=209.80 Aligned_cols=213 Identities=17% Similarity=0.130 Sum_probs=150.3
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECCCc
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKNS 662 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~~~ 662 (854)
|+|+|+||+||||++ ....+++++.++|+++ ++.|+.++++|||+...+..+...++ ...++++||+.+..+...
T Consensus 2 miKli~~D~DGTL~~---~~~~i~~~~~~al~~l-~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~ 77 (225)
T d1l6ra_ 2 MIRLAAIDVDGNLTD---RDRLISTKAIESIRSA-EKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGS 77 (225)
T ss_dssp CCCEEEEEHHHHSBC---TTSCBCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSC
T ss_pred CeEEEEEecCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCcc
Confidence 689999999999999 8899999999999999 78899999999999987777654332 456788999988877665
Q ss_pred ceEEccccccchHHHHHHHHHHHHhccCCcceEeccc-ceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCe
Q 003042 663 AWEICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKE-TAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQH 741 (854)
Q Consensus 663 ~~~~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~-~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~ 741 (854)
.+..... +......+.......-....... ....+.+. .++ . ..+.+...+......+..+..
T Consensus 78 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~----~~~~~~~~~~~~~~~i~~~~~ 141 (225)
T d1l6ra_ 78 IKKFFSN-------EGTNKFLEEMSKRTSMRSILTNRWREASTGFD-IDP----E----DVDYVRKEAESRGFVIFYSGY 141 (225)
T ss_dssp EEESSCS-------HHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEB-CCG----G----GHHHHHHHHHTTTEEEEEETT
T ss_pred EEEecCh-------HHHHHHHHHHHHhcCcceeecccceeeeeccc-cCH----H----HHHHHHHHHhhcCcEEEECCc
Confidence 5432211 11122222222211100000000 00001110 111 1 122333334445677888888
Q ss_pred EEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----Ccccc
Q 003042 742 IVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAK 817 (854)
Q Consensus 742 ~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~ 817 (854)
.+|+.|++++|+.+++++++++ |++++++++||||.||++||+.++. +|+||++ +..|+
T Consensus 142 ~~~i~~~~~~K~~ai~~l~~~~---~i~~~~v~~~GDs~nD~~m~~~a~~--------------~vav~na~~~~k~~ad 204 (225)
T d1l6ra_ 142 SWHLMNRGEDKAFAVNKLKEMY---SLEYDEILVIGDSNNDMPMFQLPVR--------------KACPANATDNIKAVSD 204 (225)
T ss_dssp EEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEECCSGGGHHHHTSSSE--------------EEECTTSCHHHHHHCS
T ss_pred EEEecCCccchHHHHHHHhhhh---ccchhheeeecCCcchHHHHHHCCe--------------EEEECCCcHHHHHhCC
Confidence 9999999999999999999999 9999999999999999999999985 6888875 47899
Q ss_pred eEeCC--HhHHHHHHHHH
Q 003042 818 YYLDD--TAEVINLLEGL 833 (854)
Q Consensus 818 y~l~~--~~eV~~~L~~l 833 (854)
|++.. .++|++.|+++
T Consensus 205 ~v~~~~~~~gi~~~l~~~ 222 (225)
T d1l6ra_ 205 FVSDYSYGEEIGQIFKHF 222 (225)
T ss_dssp EECSCCTTHHHHHHHHHT
T ss_pred EEECCCCcCHHHHHHHHh
Confidence 98864 58899998875
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.85 E-value=4.7e-22 Score=206.16 Aligned_cols=212 Identities=16% Similarity=0.185 Sum_probs=139.5
Q ss_pred cCCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc---ccceeecCcEEEEEC
Q 003042 583 TNSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE---KLGLSAEHGYFTRWS 659 (854)
Q Consensus 583 ~~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~---~l~liaenG~~I~~~ 659 (854)
|++.||++|+||||++ ..+.+ +...++.++ +++|+.|+++|||++..+.+++..+. .-.++++||+.+...
T Consensus 1 m~~~li~~DlDGTL~~---~~~~~--~~~~~~~~~-~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~ 74 (244)
T d1s2oa1 1 MRQLLLISDLDNTWVG---DQQAL--EHLQEYLGD-RRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHP 74 (244)
T ss_dssp CCSEEEEECTBTTTBS---CHHHH--HHHHHHHHT-TGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEET
T ss_pred CCceEEEEECcccCCC---CCCCH--HHHHHHHHH-HcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEc
Confidence 6778999999999998 44433 556677777 78999999999999999998875432 124678899888876
Q ss_pred CCcceEEccccccchHHHHH-----HHHHHHHhccCCcceE----ecccceEEEeeccCCCccchhhHHHHHHHHHHHhc
Q 003042 660 KNSAWEICSLTRDFDWKEIA-----EPVMKLYTETTDGSFI----EDKETAIVWHHQHADPHFGSCQAKELLDHLENVLA 730 (854)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~v-----~~~~~~y~~~~~g~~i----e~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~ 730 (854)
....+ .|.+.. ......+.+..++... +.....+.+.+...... +..+.+.+.+.
T Consensus 75 ~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 138 (244)
T d1s2oa1 75 EGLDQ---------HWADYLSEHWQRDILQAIADGFEALKPQSPLEQNPWKISYHLDPQACP-------TVIDQLTEMLK 138 (244)
T ss_dssp TEECH---------HHHHHHHTTCCHHHHHHHHHTCTTEEECCGGGCBTTBEEEEECTTSCT-------HHHHHHHHHHH
T ss_pred cCcch---------HHHHHHHHHHhHHHHHHHHhhcccccccChhhhcceEEEEeccccccH-------HHHHHHHHHHH
Confidence 53211 111111 1122222222222222 22223334433322111 22333333332
Q ss_pred C---CCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEE
Q 003042 731 N---EPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFAC 807 (854)
Q Consensus 731 ~---~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV 807 (854)
. .......+...+||+|++++||.|++++++.+ |++++++++||||.||++||+.+|+ +|
T Consensus 139 ~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~---gi~~~~~v~~GD~~ND~~Ml~~~~~--------------~v 201 (244)
T d1s2oa1 139 ETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHL---AMEPSQTLVCGDSGNDIGLFETSAR--------------GV 201 (244)
T ss_dssp TSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHTSSSE--------------EE
T ss_pred hhcccceeeecCCcEEEEEeCccchhHHHHHHHHhc---cCChhhEEEEcCCCCCHHHHhhCCc--------------EE
Confidence 2 23455677889999999999999999999999 9999999999999999999999985 78
Q ss_pred EecCCC----cccc-------eEeC--CHhHHHHHHHHH
Q 003042 808 TVGQKP----SMAK-------YYLD--DTAEVINLLEGL 833 (854)
Q Consensus 808 ~vG~~~----s~A~-------y~l~--~~~eV~~~L~~l 833 (854)
+||+.. ..|+ |+.. ..+++++.|+.+
T Consensus 202 av~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~f 240 (244)
T d1s2oa1 202 IVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAHF 240 (244)
T ss_dssp ECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHHT
T ss_pred EeCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHHHh
Confidence 898752 3333 4433 256777777764
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.85 E-value=2.6e-22 Score=206.90 Aligned_cols=211 Identities=18% Similarity=0.177 Sum_probs=137.0
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCc-ccceeecCcEEEEECCCc
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVE-KLGLSAEHGYFTRWSKNS 662 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~l~liaenG~~I~~~~~~ 662 (854)
|+|+|++|+||||++ +.. +++++++|+++ ++.|+.|++||||++..+..++..++ ..+++++||+.+..+++.
T Consensus 1 miKli~~DlDGTLl~---~~~--~~~~~~ai~~l-~~~G~~~~~aTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 74 (243)
T d1wzca1 1 MIRLIFLDIDKTLIP---GYE--PDPAKPIIEEL-KDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGY 74 (243)
T ss_dssp CEEEEEECCBTTTBS---SSC--SGGGHHHHHHH-HHTTEEEEEECSSCHHHHHHHHHHHTCCSCEEETTTTEEEECTTC
T ss_pred CcEEEEEeCCCCCCC---CCC--CHHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHhcccccccccCCcEEEcCCCc
Confidence 689999999999998 433 56789999999 89999999999999999999887653 456899999999887654
Q ss_pred ceEEccccc-----------cc-hHHHHHHHHHHHHhccCCcceE----------e--------cccceEEEeeccCCCc
Q 003042 663 AWEICSLTR-----------DF-DWKEIAEPVMKLYTETTDGSFI----------E--------DKETAIVWHHQHADPH 712 (854)
Q Consensus 663 ~~~~~~~~~-----------~~-~~~~~v~~~~~~y~~~~~g~~i----------e--------~k~~~l~~~~~~~d~~ 712 (854)
......... .. .+..........|......... . ......... ...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--- 150 (243)
T d1wzca1 75 FPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIF-EWS--- 150 (243)
T ss_dssp CC----------CEEEECSCCHHHHHHHHHHHHHHHTCBCGGGSCHHHHHHHHCCCGGGHHHHTCCSSEEEEC-BCS---
T ss_pred eecccchhHHHHHHHHHHhhhHHHHHHHHHhhhhhcccchhhhhhHHHHHHhhcCchhHHHHHHhhhcchhhh-hhh---
Confidence 322211100 00 1111111111111110000000 0 000000000 000
Q ss_pred cchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCC-CCCCeEEEEeCCcccHHHHHHhhh
Q 003042 713 FGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRG-KSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 713 ~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~g-i~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
.....+ ........+..+ ..+++.|++++|+.|++.+++++ + +++++++||||+.||++||+++|+
T Consensus 151 --~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~K~~al~~l~~~~---~~~~~~~~~a~GD~~ND~~Ml~~a~~ 217 (243)
T d1wzca1 151 --RDGWEE-------VLVEGGFKVTMG-SRFYTVHGNSDKGKAAKILLDFY---KRLGQIESYAVGDSYNDFPMFEVVDK 217 (243)
T ss_dssp --SSCHHH-------HHHHTTCEEEEC-SSSEEEECSCCHHHHHHHHHHHH---HTTSCEEEEEEECSGGGHHHHTTSSE
T ss_pred --hHHHHH-------hhhhcCeEEeec-ccccchhhhhccHHHHHHHHHHh---cCCCcccEEEEcCCHhHHHHHHcCCc
Confidence 000111 111122334333 44789999999999999999988 5 788999999999999999999985
Q ss_pred hcCCCCCCCCccEEEEEecCCCcccceEeCCHhHHHHHHH
Q 003042 792 AVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLE 831 (854)
Q Consensus 792 ~~~~~~~~~~~~~~aV~vG~~~s~A~y~l~~~~eV~~~L~ 831 (854)
+|+||++....+-.+++..|+.++++
T Consensus 218 --------------~va~~Na~~~~~~~~~~i~~~~~~i~ 243 (243)
T d1wzca1 218 --------------VFIVGSLKHKKAQNVSSIIDVLEVIK 243 (243)
T ss_dssp --------------EEEESSCCCTTCEEESCHHHHHHHHT
T ss_pred --------------EEEeCCCChHHHhhhhHHHHHHHhhC
Confidence 78899998888888999999888763
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.84 E-value=1.5e-21 Score=199.34 Aligned_cols=201 Identities=14% Similarity=0.099 Sum_probs=126.9
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCC--cccceeecCcEEEEECCCc
Q 003042 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV--EKLGLSAEHGYFTRWSKNS 662 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~--~~l~liaenG~~I~~~~~~ 662 (854)
..|||+|+||||++ +++.++++++++|++| +++|+.+++||||+...+...+..+ ...+++++||+.|......
T Consensus 4 ~~li~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 79 (232)
T d1xvia_ 4 PLLVFSDLDGTLLD---SHSYDWQPAAPWLTRL-REANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQW 79 (232)
T ss_dssp CEEEEEECTTTTSC---SSCCSCCTTHHHHHHH-HHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTC
T ss_pred CEEEEEECCCCccC---CcCcCCHHHHHHHHHH-HHCCCEEEEEeCCChhhchhHHHHhccCCceEEccCCeEEEecCCc
Confidence 45899999999999 7788999999999999 8899999999999999999988765 3467899999999876543
Q ss_pred ceEEccc----cccchHHHH-HHHHHHHHhccCCcceEeccc---ceEEEee----------ccCCCccchhhHHHHHHH
Q 003042 663 AWEICSL----TRDFDWKEI-AEPVMKLYTETTDGSFIEDKE---TAIVWHH----------QHADPHFGSCQAKELLDH 724 (854)
Q Consensus 663 ~~~~~~~----~~~~~~~~~-v~~~~~~y~~~~~g~~ie~k~---~~l~~~~----------~~~d~~~~~~~~~el~~~ 724 (854)
....... .....+... .......+.. ......... ......+ .............+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (232)
T d1xvia_ 80 QEIDGFPRIISGISHGEISLVLNTLREKEHF--KFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQ 157 (232)
T ss_dssp TTSTTTTEEECSSCHHHHHHHHHHHHHHHCC--CEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHH
T ss_pred cccchhhhhhhHHHHHHHHHhhhhhhhhhcc--ccccccchhhhhhhhhhcccchhhhhhhhcceeeeecccccHHHHHH
Confidence 2111110 111111111 1111111100 000000000 0000000 000000000011122233
Q ss_pred HHHHhcCCCEEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 725 LENVLANEPVVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 725 l~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+..........+..+...++++|.+++|+.+++.|++.+...|++++++++||||.||++||+.+|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~ 224 (232)
T d1xvia_ 158 FTARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDY 224 (232)
T ss_dssp HHHHHHHTTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSE
T ss_pred HHHHhhhccceeeeccceeeccCCCchHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCe
Confidence 3333334456677788889999999999999999998754458999999999999999999999986
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=2.4e-20 Score=191.19 Aligned_cols=216 Identities=14% Similarity=0.141 Sum_probs=135.1
Q ss_pred CCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCC-c--ccceeecCcEEEEECC
Q 003042 584 NSRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGV-E--KLGLSAEHGYFTRWSK 660 (854)
Q Consensus 584 ~~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~-~--~l~liaenG~~I~~~~ 660 (854)
..||++||+||||++ +++.++++++++|+++ ++.| .++++|||....+...+... . ...+...+|+++...+
T Consensus 2 ~~kl~~fDlDGTLl~---~~~~i~~~~~~al~~l-~~~g-~~~i~Tgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T d2amya1 2 GPALCLFDVDGTLTA---PRQKITKEMDDFLQKL-RQKI-KIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKDG 76 (243)
T ss_dssp CSEEEEEESBTTTBC---TTSCCCHHHHHHHHHH-TTTS-EEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEETT
T ss_pred CCEEEEEcCcCCeeC---CCCcCCHHHHHHHHHH-HcCC-CEEEEcCCChHHhHHHHhhhccccceEEecCcEEEEecCC
Confidence 469999999999999 7899999999999999 7766 58899999998887766543 1 2234445677776666
Q ss_pred CcceEEccccccc-hHHH-HHHHHHHHHhccCCc----ceEecccceEEEeeccCCCcc-----------chhhHHHHHH
Q 003042 661 NSAWEICSLTRDF-DWKE-IAEPVMKLYTETTDG----SFIEDKETAIVWHHQHADPHF-----------GSCQAKELLD 723 (854)
Q Consensus 661 ~~~~~~~~~~~~~-~~~~-~v~~~~~~y~~~~~g----~~ie~k~~~l~~~~~~~d~~~-----------~~~~~~el~~ 723 (854)
+..+......... .... ........+...... ...+.......+......... ......+...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (243)
T d2amya1 77 KLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVA 156 (243)
T ss_dssp EEEEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHHH
T ss_pred ccceecchhHHHHHHHHHHHHhhhhhhheeccccccccchhhhhhhhhcccccccccchhhhhhhhhhhcchhhhHHHHH
Confidence 5555543222111 1111 111111111111111 111111112222211111110 0112344455
Q ss_pred HHHHHhcCCC-EEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeC----CcccHHHHHHhhhhcCCCCC
Q 003042 724 HLENVLANEP-VVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGD----DRSDEDMFESIEQAVADPSV 798 (854)
Q Consensus 724 ~l~~~l~~~~-~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD----s~ND~~Mf~~ag~~~~~~~~ 798 (854)
.+.+.+.... ....++..++||+|+++|||+|+++|+ +++++++++||| |.||++||+++|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~l~------~~~~~ev~afGD~~~~g~NDi~Ml~~~g~------- 223 (243)
T d2amya1 157 DLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVE------NDGYKTIYFFGDKTMPGGNDHEIFTDPRT------- 223 (243)
T ss_dssp HHHHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGTT------TSCCSEEEEEECSCC---CCCHHHHCTTE-------
T ss_pred HHHHHhcccceEEEecCCccceeeccccCHHHHHHHHh------CCCcceEEEEcCCCCCCCCcHHHHHccCC-------
Confidence 5555555444 455677899999999999999999884 678999999999 6799999999984
Q ss_pred CCCccEEEEEecCCCcccceEeCCHhHHHHHHHHHH
Q 003042 799 PGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGLA 834 (854)
Q Consensus 799 ~~~~~~~aV~vG~~~s~A~y~l~~~~eV~~~L~~l~ 834 (854)
.+++ +++++++.+.++.|+
T Consensus 224 ------~~~~-----------v~~~~~~~~~~~~l~ 242 (243)
T d2amya1 224 ------MGYS-----------VTAPEDTRRICELLF 242 (243)
T ss_dssp ------EEEE-----------CSSHHHHHHHHHHHC
T ss_pred ------cEEE-----------eCCHHHHHHHHHHHh
Confidence 2443 568999999998875
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.82 E-value=2.7e-20 Score=186.60 Aligned_cols=188 Identities=18% Similarity=0.204 Sum_probs=146.2
Q ss_pred ccCchHHHhhhCCchHHHHHHHHHHHc--CCCEEEEEecCcc-ccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCC
Q 003042 297 GIHMGQFESIMSLDVTGQKVKELKEKF--DGKIVILGVDDMD-LFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARS 373 (854)
Q Consensus 297 GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~iil~VdRld-~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~ 373 (854)
|||.+.|.+........+....++++| +++++|+++||++ +.||+..+++|++.|.++.+. .++.|+.+|..
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~--~~~~l~i~G~g--- 75 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF--QEMRFIIIGKG--- 75 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG--GGEEEEEECCB---
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhCCCCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCC--CCeEEEEEeec---
Confidence 899999987666566677778888887 5888999999997 589999999999999754322 13558888732
Q ss_pred ChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccc
Q 003042 374 SGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLD 453 (854)
Q Consensus 374 ~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~ 453 (854)
.+.++.+.+.+ ... ++ .++++.+.++.+++..+|+.||++|+||..||+|++++|||+|
T Consensus 76 -~~~~~~~~~~~---~~~----~~-----~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~-------- 134 (196)
T d2bfwa1 76 -DPELEGWARSL---EEK----HG-----NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL-------- 134 (196)
T ss_dssp -CHHHHHHHHHH---HHH----CT-----TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHT--------
T ss_pred -ccchhhhhhhh---hhc----cc-----eeEEeeeccccccchhccccccccccccccccccccchhhhhc--------
Confidence 13333333332 222 22 2667888999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCceEEEecCccccccCC--CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhcccc
Q 003042 454 RALGVDEKNPPQKKSVIIVSEFIGCSPSLS--GAIRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYIS 523 (854)
Q Consensus 454 ~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 523 (854)
|.|+|+|..+|..+.+. .|++++|.|+++++++|.++|.+..+.+....+..++++.
T Consensus 135 -------------G~pvI~~~~~~~~e~i~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~ 193 (196)
T d2bfwa1 135 -------------GAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAM 193 (196)
T ss_dssp -------------TCEEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred -------------CceeeecCCCccceeecCCceeeECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 45999999888877674 4899999999999999999999887666555555554433
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=1.7e-18 Score=176.81 Aligned_cols=213 Identities=16% Similarity=0.166 Sum_probs=125.0
Q ss_pred eEEE-EecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcC-Cc----ccceeecCcEEEEEC
Q 003042 586 RLIL-LDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSG-VE----KLGLSAEHGYFTRWS 659 (854)
Q Consensus 586 klI~-~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~-~~----~l~liaenG~~I~~~ 659 (854)
|+|+ |||||||++ +++.++++++++|+++ ++.|+ ++++|||........+.. ++ ...+++.+|.++...
T Consensus 1 k~i~lFDlDGTLl~---~~~~is~~~~~~i~~l-~~~g~-~~i~tgrr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 75 (244)
T d2fuea1 1 RVLCLFDVDGTLTP---ARQKIDPEVAAFLQKL-RSRVQ-IGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYKH 75 (244)
T ss_dssp CEEEEEESBTTTBS---TTSCCCHHHHHHHHHH-TTTSE-EEEECSSCHHHHHHHHSSTTTHHHHCSEEEEGGGTEEEET
T ss_pred CEEEEEccccCccC---CCCcCCHHHHHHHHHH-HhCCC-EEEEecCChhhhhhhhhhhhccccccceeecccceeeccC
Confidence 4555 699999999 8889999999999999 78885 566777776655544432 21 245678888888877
Q ss_pred CCcceEEccccccc-hHHHHH-HHHHHHHhccCC----cceEecccceEEEeeccCCCccc-----------hhhHHHHH
Q 003042 660 KNSAWEICSLTRDF-DWKEIA-EPVMKLYTETTD----GSFIEDKETAIVWHHQHADPHFG-----------SCQAKELL 722 (854)
Q Consensus 660 ~~~~~~~~~~~~~~-~~~~~v-~~~~~~y~~~~~----g~~ie~k~~~l~~~~~~~d~~~~-----------~~~~~el~ 722 (854)
+...+......... ...... ............ ..+.........++......... .....+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (244)
T d2fuea1 76 GRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFV 155 (244)
T ss_dssp TEECCCCCHHHHHCHHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHH
T ss_pred CccceeechhHHHhhhHHHHHHhhhhhhhheecccccccchhhhhhhhhhccccccccchhhhhhhhhhccchhhHHHHH
Confidence 66555433211111 111111 111111111111 11111111122222211111100 01112223
Q ss_pred HHHHHHhcCCC-EEEEEcCeEEEEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCC----cccHHHHHHhhhhcCCCC
Q 003042 723 DHLENVLANEP-VVVKRGQHIVEVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDD----RSDEDMFESIEQAVADPS 797 (854)
Q Consensus 723 ~~l~~~l~~~~-~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs----~ND~~Mf~~ag~~~~~~~ 797 (854)
..+........ ....++..++||+|+++|||.|+++|++ .+++++++|||+ .||++||+.+|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~L~~------~~~~ev~afGD~~~~G~ND~eml~~a~~------ 223 (244)
T d2fuea1 156 EALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDQ------DSFDTIHFFGNETSPGGNDFEIFADPRT------ 223 (244)
T ss_dssp HHHHHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHHTT------SCCSEEEEEESCCSTTSTTHHHHHSTTS------
T ss_pred HHHHHHhhccceeEeeccCccceecchhccHHHHHHHHhc------CChhhEEEEcCCCCCCCCcHHHHHcCCC------
Confidence 33333333333 4445678899999999999999999874 578999999997 499999999984
Q ss_pred CCCCccEEEEEecCCCcccceEeCCHhHHHHHHHHH
Q 003042 798 VPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLEGL 833 (854)
Q Consensus 798 ~~~~~~~~aV~vG~~~s~A~y~l~~~~eV~~~L~~l 833 (854)
.+++|+ ++++.++.|..+
T Consensus 224 -------~~~av~-----------na~~~~k~~~~~ 241 (244)
T d2fuea1 224 -------VGHSVV-----------SPQDTVQRCREI 241 (244)
T ss_dssp -------EEEECS-----------SHHHHHHHHHHH
T ss_pred -------cEEEcC-----------CHHHHHHHHHHh
Confidence 366654 566666666554
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.75 E-value=5.5e-19 Score=191.44 Aligned_cols=201 Identities=14% Similarity=0.178 Sum_probs=147.7
Q ss_pred EEEEeccccCchHHHhhhCCchHHHHHHHHHHHc---CCCEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 003042 290 SIKILPVGIHMGQFESIMSLDVTGQKVKELKEKF---DGKIVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQ 366 (854)
Q Consensus 290 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 366 (854)
++.++|+|||++.+..... +.. ...+++.+ .++++++++||+.+.||+..+++|++++.+++|+.. ++.
T Consensus 160 ~i~vi~~gv~~~~~~~~~~-~~~---~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~----~~i 231 (370)
T d2iw1a1 160 RFQILPPGIYPDRKYSEQI-PNS---REIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNT----LLF 231 (370)
T ss_dssp GEEECCCCCCGGGSGGGSC-TTH---HHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTE----EEE
T ss_pred eEEEEEeecccccccccCc-hhh---hhhhhhccCCCccceEEEEEeccccccchhhhcccccccccccccce----eee
Confidence 4568899999887653322 222 23345554 478999999999999999999999999988877643 554
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeee
Q 003042 367 ITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVIIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSR 446 (854)
Q Consensus 367 i~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~ 446 (854)
++... . + +++ ++++.+.+. ...+.+.+. .+++..+|+.||++|+||..||||++++|||+|
T Consensus 232 i~g~~--~-~--~~~----~~~~~~~~~-------~~~v~~~g~--~~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~- 292 (370)
T d2iw1a1 232 VVGQD--K-P--RKF----EALAEKLGV-------RSNVHFFSG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITA- 292 (370)
T ss_dssp EESSS--C-C--HHH----HHHHHHHTC-------GGGEEEESC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHH-
T ss_pred ccccc--c-c--ccc----ccccccccc-------ccccccccc--ccccccccccccccccccccccccceeeecccC-
Confidence 55322 1 1 223 334444332 222334443 468999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCCCCceEEEecCccccccCC---Cc-eEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhccc
Q 003042 447 QGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS---GA-IRVNPWNVDAVADAMDSALQMENQEKILRHEKHYKYI 522 (854)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~a-i~vnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 522 (854)
|.|+|+|+.+|..+.+. .| ++++|.|++++|++|.++|++++ .++...++.++++
T Consensus 293 --------------------G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d~~-~~~~~~~~ar~~~ 351 (370)
T d2iw1a1 293 --------------------GLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSP-LRMAWAENARHYA 351 (370)
T ss_dssp --------------------TCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHH-HHHHHHHHHHHHH
T ss_pred --------------------CeeEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHH
Confidence 45999999999988872 35 45689999999999999998654 4555667778888
Q ss_pred cccChHHHHHHHHHHH
Q 003042 523 SSHDVAYWAKSIDQDL 538 (854)
Q Consensus 523 ~~~~~~~W~~~~l~~l 538 (854)
++++...|.+...+-+
T Consensus 352 ~~~~~~~~~~~~~~ii 367 (370)
T d2iw1a1 352 DTQDLYSLPEKAADII 367 (370)
T ss_dssp HHSCCSCHHHHHHHHH
T ss_pred HHhChhHHHHHHHHHH
Confidence 8898888987655443
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.60 E-value=9.5e-16 Score=148.84 Aligned_cols=142 Identities=17% Similarity=0.200 Sum_probs=111.0
Q ss_pred EEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEE
Q 003042 327 IVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVI 406 (854)
Q Consensus 327 ~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~ 406 (854)
..+|+|||+++.||+..+++|+.++ |+.+ |+.+|..+ +++..+.+.+++.+. ....|++
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l----~~~~----l~ivg~~~--~~~~~~~~~~~~~~~-----------~~~~v~~ 71 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS--KGDHAERYARKIMKI-----------APDNVKF 71 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC--TTSTHHHHHHHHHHH-----------SCTTEEE
T ss_pred CEEEEEecCccccCHHHHHHHHHHh----cCCe----EEEEEecc--cccchhhhhhhhccc-----------ccCcEEE
Confidence 4588999999999999999999765 5554 66677543 334445555554431 1112555
Q ss_pred EcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccccccCC---
Q 003042 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPSLS--- 483 (854)
Q Consensus 407 ~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--- 483 (854)
.+.++.+++..+|+.||+++.||..||+|++++|||+| +.|+|+|..+|+.+.+.
T Consensus 72 -~g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~---------------------g~pvi~s~~~~~~e~i~~~~ 129 (166)
T d2f9fa1 72 -LGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMAS---------------------GKPVIAVNEGGFKETVINEK 129 (166)
T ss_dssp -EESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHT---------------------TCCEEEESSHHHHHHCCBTT
T ss_pred -eecccccccccccccccccccccccccccccccccccc---------------------cccceeecCCcceeeecCCc
Confidence 46899999999999999999999999999999999999 45999999999988772
Q ss_pred CceEeCCCCHHHHHHHHHHHhcCCHHHHH
Q 003042 484 GAIRVNPWNVDAVADAMDSALQMENQEKI 512 (854)
Q Consensus 484 ~ai~vnP~d~~~~A~ai~~aL~m~~~er~ 512 (854)
.|+.+++ |+++++++|.+++++++..++
T Consensus 130 ~g~~~~~-d~~~~~~~i~~l~~~~~~~~~ 157 (166)
T d2f9fa1 130 TGYLVNA-DVNEIIDAMKKVSKNPDKFKK 157 (166)
T ss_dssp TEEEECS-CHHHHHHHHHHHHHCTTTTHH
T ss_pred ccccCCC-CHHHHHHHHHHHHhCHHHHHH
Confidence 3676655 899999999999998764443
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.36 E-value=3.3e-14 Score=141.17 Aligned_cols=73 Identities=7% Similarity=0.040 Sum_probs=59.1
Q ss_pred eCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEe-C
Q 003042 747 PQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYL-D 821 (854)
Q Consensus 747 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l-~ 821 (854)
.....|+...+..++++ |+++++|+||||+.||++||+.||. +|+|+.. +..|+|.+ +
T Consensus 125 ~~~~~~~~~~~~~~~~~---~i~~~eviaiGDg~NDi~Ml~~Ag~--------------gIAmna~~~v~~~~~~~~~~~ 187 (206)
T d1rkua_ 125 GYQLRQKDPKRQSVIAF---KSLYYRVIAAGDSYNDTTMLSEAHA--------------GILFHAPENVIREFPQFPAVH 187 (206)
T ss_dssp EEECCSSSHHHHHHHHH---HHTTCEEEEEECSSTTHHHHHHSSE--------------EEEESCCHHHHHHCTTSCEEC
T ss_pred cccccchhhHHHHHHHh---cccccceEEecCCccCHHHHHhCCc--------------cEEECCCHHHHHhCCCceeec
Confidence 33456777888888888 8999999999999999999999996 6788653 46778864 6
Q ss_pred CHhHHHHHHHHHHhc
Q 003042 822 DTAEVINLLEGLATE 836 (854)
Q Consensus 822 ~~~eV~~~L~~l~~~ 836 (854)
+.+++.+.|.+..+.
T Consensus 188 ~~~d~~~~~~~~~~~ 202 (206)
T d1rkua_ 188 TYEDLKREFLKASSR 202 (206)
T ss_dssp SHHHHHHHHHHHCSS
T ss_pred CHHHHHHHHHHHhhC
Confidence 899999888876554
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.02 E-value=3.2e-10 Score=116.61 Aligned_cols=60 Identities=13% Similarity=0.152 Sum_probs=48.7
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEEEecCC--------CcccceEeCC
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFACTVGQK--------PSMAKYYLDD 822 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~--------~s~A~y~l~~ 822 (854)
+...++.+++++ |++|+++++|||+. +|+.|.+.+|.. .+.|..|.. +..++|++++
T Consensus 178 ~p~~~~~a~~~l---gi~p~e~v~IGD~~~~DI~~a~~aG~~-----------tilV~~G~~~~~~l~~~~~~pd~i~~s 243 (250)
T d2c4na1 178 SPWIIRAALNKM---QAHSEETVIVGDNLRTDILAGFQAGLE-----------TILVLSGVSSLDDIDSMPFRPSWIYPS 243 (250)
T ss_dssp STHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHTTCE-----------EEEESSSSCCGGGGSSCSSCCSEEESS
T ss_pred hhhhHhhhhhhh---cCCchheEEecCChHHHHHHHHHCCCC-----------EEEECCCCCCHHHHHhCCCCCCEEECC
Confidence 577899999999 99999999999995 699999999973 356666742 2346899998
Q ss_pred HhH
Q 003042 823 TAE 825 (854)
Q Consensus 823 ~~e 825 (854)
..|
T Consensus 244 l~e 246 (250)
T d2c4na1 244 VAE 246 (250)
T ss_dssp GGG
T ss_pred HHH
Confidence 776
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.99 E-value=1.5e-10 Score=114.28 Aligned_cols=70 Identities=17% Similarity=0.279 Sum_probs=57.1
Q ss_pred EEeeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC---CcccceEe
Q 003042 744 EVKPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK---PSMAKYYL 820 (854)
Q Consensus 744 EI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~---~s~A~y~l 820 (854)
+....+.+|+.++..+++.+ +++++++++||||.||++|++.||. +|+|+.. +..|+|++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~iGDs~nDi~m~~~ag~--------------~va~na~~~lk~~Ad~vi 197 (210)
T d1j97a_ 135 GEVLKENAKGEILEKIAKIE---GINLEDTVAVGDGANDISMFKKAGL--------------KIAFCAKPILKEKADICI 197 (210)
T ss_dssp CSSCSTTHHHHHHHHHHHHH---TCCGGGEEEEESSGGGHHHHHHCSE--------------EEEESCCHHHHTTCSEEE
T ss_pred ccccccccccchhhhHHHHh---cccccceEEecCCcChHHHHHHCCC--------------CEEECCCHHHHHhCCEEE
Confidence 34556788999999999999 9999999999999999999999996 4555432 47899999
Q ss_pred C--CHhHHHHHH
Q 003042 821 D--DTAEVINLL 830 (854)
Q Consensus 821 ~--~~~eV~~~L 830 (854)
+ |.++|+++|
T Consensus 198 ~~~d~~~vl~~l 209 (210)
T d1j97a_ 198 EKRDLREILKYI 209 (210)
T ss_dssp CSSCGGGGGGGC
T ss_pred cCCCHHHHHHHh
Confidence 7 456777665
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=98.99 E-value=5.3e-10 Score=115.50 Aligned_cols=67 Identities=12% Similarity=0.247 Sum_probs=54.5
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCC-cccHHHHHHhhhhcCCCCCCCCccEEEEEecCC--------CcccceEeC
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDD-RSDEDMFESIEQAVADPSVPGIAEVFACTVGQK--------PSMAKYYLD 821 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs-~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~--------~s~A~y~l~ 821 (854)
.+......+++++ |++++++++|||+ .+|+.|.+.+|.. .+.|..|.. ...++|+++
T Consensus 186 P~p~~~~~a~~~l---~~~~~~~lmVGD~~~~DI~ga~~aG~~-----------si~V~~G~~~~~~~~~~~~~PD~ii~ 251 (261)
T d1vjra_ 186 PNPLVVDVISEKF---GVPKERMAMVGDRLYTDVKLGKNAGIV-----------SILVLTGETTPEDLERAETKPDFVFK 251 (261)
T ss_dssp TSTHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHHHTCE-----------EEEESSSSCCHHHHHHCSSCCSEEES
T ss_pred CcHHHHHHHHhhh---ccCchhcceecCChhHHHHHHHHCCCc-----------EEEECCCCCCHHHHhhcCCCCCEEEC
Confidence 3567788999999 9999999999999 5799999999973 355555642 235799999
Q ss_pred CHhHHHHHHH
Q 003042 822 DTAEVINLLE 831 (854)
Q Consensus 822 ~~~eV~~~L~ 831 (854)
+..|+.++|+
T Consensus 252 ~l~eL~~~l~ 261 (261)
T d1vjra_ 252 NLGELAKAVQ 261 (261)
T ss_dssp SHHHHHHHHC
T ss_pred CHHHHHHHhC
Confidence 9999998874
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=98.96 E-value=4.3e-10 Score=115.74 Aligned_cols=51 Identities=16% Similarity=0.154 Sum_probs=41.8
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhh
Q 003042 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~ 640 (854)
+|.|+||+||||++ ..+.+ +.+.++|++| ++.|.+++++|+++......+.
T Consensus 2 yk~v~fDlDGTL~~---~~~~i-~~a~~~i~~l-~~~g~~~~~~Tn~s~~~~~~~~ 52 (253)
T d1yv9a1 2 YQGYLIDLDGTIYL---GKEPI-PAGKRFVERL-QEKDLPFLFVTNNTTKSPETVA 52 (253)
T ss_dssp CCEEEECCBTTTEE---TTEEC-HHHHHHHHHH-HHTTCCEEEEECCCSSCHHHHH
T ss_pred CCEEEEcCCCccEe---CCCcC-ccHHHHHHHH-HHCCCCEEEEeCCCCCCHHHHH
Confidence 58999999999998 55556 7789999999 8899999999876655555543
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.92 E-value=2.2e-09 Score=104.08 Aligned_cols=74 Identities=15% Similarity=0.192 Sum_probs=60.2
Q ss_pred eCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeCC
Q 003042 747 PQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDD 822 (854)
Q Consensus 747 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~ 822 (854)
....+|..+++.+++++ |+++++|++|||+.||++||+.+|. +++++++ +..|+|++..
T Consensus 76 ~~~~~K~~~l~~~~~~~---~i~~~~v~~vGDd~nDl~~l~~~g~--------------siap~nA~~~vk~~A~~Vt~~ 138 (177)
T d1k1ea_ 76 LGKLEKETACFDLMKQA---GVTAEQTAYIGDDSVDLPAFAACGT--------------SFAVADAPIYVKNAVDHVLST 138 (177)
T ss_dssp ESCSCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHHHHTTSSEECSS
T ss_pred cccccHHHHHHHHHHHh---cCCcceeEEecCCccHHHHHhhCCe--------------EEEcCCccHHHHHhCCEEeCC
Confidence 34466999999999999 9999999999999999999999985 6777775 5789999964
Q ss_pred H---hHHHHHHHHHHhcc
Q 003042 823 T---AEVINLLEGLATES 837 (854)
Q Consensus 823 ~---~eV~~~L~~l~~~~ 837 (854)
. -.|.++.+.+....
T Consensus 139 ~GG~GavrE~~e~il~~~ 156 (177)
T d1k1ea_ 139 HGGKGAFREMSDMILQAQ 156 (177)
T ss_dssp CTTTTHHHHHHHHHHHHT
T ss_pred CCCCchHHHHHHHHHHHC
Confidence 2 34777777766543
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.67 E-value=2.6e-09 Score=107.19 Aligned_cols=70 Identities=13% Similarity=0.168 Sum_probs=53.8
Q ss_pred cchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC-----Ccc-cceEeCCH
Q 003042 750 VSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK-----PSM-AKYYLDDT 823 (854)
Q Consensus 750 vsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~-----~s~-A~y~l~~~ 823 (854)
..|+..+..+++.+ +.+++++++|||+.||++|++.|+. +++++.. ... +...+++.
T Consensus 144 ~~k~~~~~~~~~~~---~~~~~~~i~iGDs~~Dl~~a~~A~~--------------~~a~~~~~~~~~~~~~~~~~~~d~ 206 (226)
T d2feaa1 144 NQCGCCKPSVIHEL---SEPNQYIIMIGDSVTDVEAAKLSDL--------------CFARDYLLNECREQNLNHLPYQDF 206 (226)
T ss_dssp SCCSSCHHHHHHHH---CCTTCEEEEEECCGGGHHHHHTCSE--------------EEECHHHHHHHHHTTCCEECCSSH
T ss_pred cCCHHHHHHHHHHh---cCCCceEEEEeCchhhHHHHHHCCE--------------EEEecchHHHHHHcCCCeeecCCH
Confidence 34777778888888 9999999999999999999999985 4455532 122 23346889
Q ss_pred hHHHHHHHHHHhc
Q 003042 824 AEVINLLEGLATE 836 (854)
Q Consensus 824 ~eV~~~L~~l~~~ 836 (854)
.++...|+.+.+.
T Consensus 207 ~~i~~~l~~~~~~ 219 (226)
T d2feaa1 207 YEIRKEIENVKEV 219 (226)
T ss_dssp HHHHHHHHTSHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999887654
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.66 E-value=3e-08 Score=97.92 Aligned_cols=71 Identities=21% Similarity=0.244 Sum_probs=60.3
Q ss_pred eCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------CcccceEe
Q 003042 747 PQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------PSMAKYYL 820 (854)
Q Consensus 747 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------~s~A~y~l 820 (854)
+.+-.|...+..+++.+ |++++++++|||+.+|+.+.+.+|.. +++|.+|.. ...|+|++
T Consensus 134 ~~~~~~p~~~~~~~~~~---~~~~~~~v~VGDs~~Di~aa~~aGi~-----------~i~v~~g~~~~~~l~~~~pd~vi 199 (210)
T d2ah5a1 134 PEAPHKADVIHQALQTH---QLAPEQAIIIGDTKFDMLGARETGIQ-----------KLAITWGFGEQADLLNYQPDYIA 199 (210)
T ss_dssp SSCCSHHHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSSSCHHHHHTTCCSEEE
T ss_pred ccccccccccchhhhhh---hcccccceeecCCHHHHHHHHHcCCe-----------EEEEcCCCCCHHHHHhCCCCEEE
Confidence 34566889999999999 99999999999999999999999973 577877753 35689999
Q ss_pred CCHhHHHHHHH
Q 003042 821 DDTAEVINLLE 831 (854)
Q Consensus 821 ~~~~eV~~~L~ 831 (854)
++..|++++|+
T Consensus 200 ~~l~el~~~le 210 (210)
T d2ah5a1 200 HKPLEVLAYFQ 210 (210)
T ss_dssp SSTTHHHHHTC
T ss_pred CCHHHHHHHhC
Confidence 99999988764
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=98.59 E-value=2.7e-08 Score=96.85 Aligned_cols=67 Identities=10% Similarity=0.100 Sum_probs=55.8
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC-----CcccceEeCCHhHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK-----PSMAKYYLDDTAEV 826 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~-----~s~A~y~l~~~~eV 826 (854)
+...+..+++.+ +++++++++|||+.+|+.+.+++|.. .++.|..|.. ...|+|++++..|+
T Consensus 110 ~p~m~~~~~~~~---~i~~~~s~mVGDs~~Di~aA~~Ag~~----------~~~lv~~g~~~~~~~~~~ad~v~~~l~dl 176 (182)
T d2gmwa1 110 HPGMLLSARDYL---HIDMAASYMVGDKLEDMQAAVAANVG----------TKVLVRTGKPITPEAENAADWVLNSLADL 176 (182)
T ss_dssp SCHHHHHHHHHH---TBCGGGCEEEESSHHHHHHHHHTTCS----------EEEEESSSSCCCHHHHHHCSEEESCGGGH
T ss_pred ccccccchhhhc---ccccccccccCCCHHHHHHHHHhCCC----------cEEEECCCCCCCcccccCCCEEECCHHHH
Confidence 455788888998 99999999999999999999999873 2366777753 24699999999999
Q ss_pred HHHHH
Q 003042 827 INLLE 831 (854)
Q Consensus 827 ~~~L~ 831 (854)
.++|+
T Consensus 177 ~~~ik 181 (182)
T d2gmwa1 177 PQAIK 181 (182)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99886
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=98.54 E-value=1.2e-07 Score=96.88 Aligned_cols=59 Identities=19% Similarity=0.307 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHhhCCCCCCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEEEecCC--------CcccceEeCCH
Q 003042 753 GIVVKNLISTMRSRGKSPDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFACTVGQK--------PSMAKYYLDDT 823 (854)
Q Consensus 753 g~al~~ll~~l~~~gi~~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~--------~s~A~y~l~~~ 823 (854)
....+.+++++ |++++++++|||+. +|+.+.+.+|.. .+.|..|.. +..++|++++.
T Consensus 183 p~~~~~al~~l---~i~~~~~~mIGDs~~~DI~gA~~aG~~-----------si~V~~G~~~~~~~~~~~~~PD~vi~sl 248 (253)
T d1wvia_ 183 AVIMNKALDRL---GVKRHEAIMVGDNYLTDITAGIKNDIA-----------TLLVTTGFTKPEEVPALPIQPDFVLSSL 248 (253)
T ss_dssp HHHHHHHHHHH---TSCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEESSSSSCTTTGGGCSSCCSEEESCG
T ss_pred cccceehhhhc---cccccceEEEcCChHHHHHHHHHCCCC-----------EEEECCCCCCHHHHhhcCCCCCEEECCH
Confidence 67788999999 99999999999995 599999999973 356666742 23458999886
Q ss_pred hH
Q 003042 824 AE 825 (854)
Q Consensus 824 ~e 825 (854)
.|
T Consensus 249 ~e 250 (253)
T d1wvia_ 249 AE 250 (253)
T ss_dssp GG
T ss_pred HH
Confidence 65
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=98.40 E-value=5.8e-09 Score=103.26 Aligned_cols=64 Identities=17% Similarity=0.268 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC----cccceEeCCHhHHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP----SMAKYYLDDTAEVI 827 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~----s~A~y~l~~~~eV~ 827 (854)
+...++.+++++ |++|+++++|||+.+|+.+.+.+|.. ++.|.+|..+ ..++|.+++..|++
T Consensus 139 ~p~~~~~~~~~~---~~~~~~~l~VgDs~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~i~~l~dll 204 (207)
T d2hdoa1 139 DPLPLLTALEKV---NVAPQNALFIGDSVSDEQTAQAANVD-----------FGLAVWGMDPNADHQKVAHRFQKPLDIL 204 (207)
T ss_dssp SSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEEGGGCCTTGGGSCCSEEESSGGGGG
T ss_pred hhhhhcccccce---eeeccceeEecCCHHHHHHHHHcCCe-----------EEEEecCCCChhHhhhcCcEeCCHHHHH
Confidence 678999999999 99999999999999999999999983 4667777542 56889999888876
Q ss_pred HH
Q 003042 828 NL 829 (854)
Q Consensus 828 ~~ 829 (854)
++
T Consensus 205 ~l 206 (207)
T d2hdoa1 205 EL 206 (207)
T ss_dssp GG
T ss_pred hh
Confidence 53
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=98.40 E-value=3.9e-07 Score=84.85 Aligned_cols=52 Identities=17% Similarity=0.255 Sum_probs=42.2
Q ss_pred hhcCCeEEEEecCCCCCCCCCC---------CCCCCHHHHHHHHHcccCCCCeEEEEcCCCc
Q 003042 581 NKTNSRLILLDYDGTVMPQTSE---------DKRPSTEVLSILNDLCNDPKNAVFIVSGRGK 633 (854)
Q Consensus 581 ~~~~~klI~~DlDGTLl~~~~~---------~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~ 633 (854)
..++.|.|+||+||||++.... ...+-+.+++.|+.| ++.|+.++++|||+.
T Consensus 3 ~~~kpk~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l-~~~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 3 TPGKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMY-ALMGYQIVVVSGRES 63 (149)
T ss_dssp CTTSCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHH-HHTTCEEEEEECSCC
T ss_pred CCCCCcEEEEEcCCCcEeCCCCCcCCccccccCccCHHHHHHHHHH-HhccCeEEEEecCcH
Confidence 3467899999999999873211 125678999999999 889999999999974
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.35 E-value=6e-07 Score=85.33 Aligned_cols=39 Identities=13% Similarity=0.051 Sum_probs=35.6
Q ss_pred chHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 751 SKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 751 sKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
.|...+..+++.+ |++++++++|||+..|+...+.+|..
T Consensus 99 p~~~~~~~~~~~~---~~~~~~~l~igD~~~di~aA~~aG~~ 137 (164)
T d1u7pa_ 99 SKVTHFERLHHKT---GVPFSQMVFFDDENRNIIDVGRLGVT 137 (164)
T ss_dssp CHHHHHHHHHHHH---CCCGGGEEEEESCHHHHHHHHTTTCE
T ss_pred CChHHHHHHHHHh---CCChHHEEEEcCCHHHHHHHHHcCCE
Confidence 3778889999999 99999999999999999999999873
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.35 E-value=2.3e-07 Score=92.61 Aligned_cols=59 Identities=25% Similarity=0.354 Sum_probs=47.0
Q ss_pred CcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC------cccceEeCC
Q 003042 749 GVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP------SMAKYYLDD 822 (854)
Q Consensus 749 gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~------s~A~y~l~~ 822 (854)
+..|+..++.+.+.. ++++++++|||.||++|++.+|. +|++|..+ ..|+|++.+
T Consensus 151 ~~~K~~~v~~~~~~~-----~~~~~~~vGDs~~Di~~~~~ag~--------------~va~~~~~~~~~~~~~ad~~i~~ 211 (217)
T d1nnla_ 151 SGGKGKVIKLLKEKF-----HFKKIIMIGDGATDMEACPPADA--------------FIGFGGNVIRQQVKDNAKWYITD 211 (217)
T ss_dssp TTHHHHHHHHHHHHH-----CCSCEEEEESSHHHHTTTTTSSE--------------EEEECSSCCCHHHHHHCSEEESC
T ss_pred cchHHHHHHHHHhcc-----CccccEEEEeCHhhHHHHHhCCc--------------eEEECCCHHHHHHHHhCCCEeCC
Confidence 445899999887654 57899999999999999999985 56676432 468899998
Q ss_pred HhHH
Q 003042 823 TAEV 826 (854)
Q Consensus 823 ~~eV 826 (854)
..|+
T Consensus 212 f~el 215 (217)
T d1nnla_ 212 FVEL 215 (217)
T ss_dssp GGGG
T ss_pred HHHh
Confidence 7775
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.35 E-value=2.6e-07 Score=92.32 Aligned_cols=58 Identities=19% Similarity=0.253 Sum_probs=49.8
Q ss_pred CCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------CcccceEeCCHhHHHHHHHHHH
Q 003042 766 RGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------PSMAKYYLDDTAEVINLLEGLA 834 (854)
Q Consensus 766 ~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------~s~A~y~l~~~~eV~~~L~~l~ 834 (854)
.+++|+++++|||+.+|+.+.+.+|.. +++|++|.. +..|+|++++..++.++|+.|+
T Consensus 164 ~~~~p~~~l~VGD~~~Di~aA~~aG~~-----------~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l~~l~ 227 (228)
T d2hcfa1 164 ANYSPSQIVIIGDTEHDIRCARELDAR-----------SIAVATGNFTMEELARHKPGTLFKNFAETDEVLASIL 227 (228)
T ss_dssp CCCCGGGEEEEESSHHHHHHHHTTTCE-----------EEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHHHHH
T ss_pred cCCChhHheeecCChHHHHHHHHcCCE-----------EEEEcCCCCCHHHHhhCCCCEEECCHHHHHHHHHHHh
Confidence 368899999999999999999999973 567777763 3578999999999999999875
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=98.34 E-value=2.1e-09 Score=107.31 Aligned_cols=69 Identities=23% Similarity=0.282 Sum_probs=56.8
Q ss_pred CcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC------CcccceEeCC
Q 003042 749 GVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK------PSMAKYYLDD 822 (854)
Q Consensus 749 gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~------~s~A~y~l~~ 822 (854)
...|......+++.+ +++++++++|||+.+|+.+.+.+|.. ++.|.+|.. ...|+|++++
T Consensus 150 ~kp~p~~~~~~~~~~---~~~~~~~~~igD~~~Di~~A~~aG~~-----------~i~v~~g~~~~~~l~~~~~d~~v~~ 215 (224)
T d2hsza1 150 IKPHPAPFYYLCGKF---GLYPKQILFVGDSQNDIFAAHSAGCA-----------VVGLTYGYNYNIPIAQSKPDWIFDD 215 (224)
T ss_dssp CTTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSCSTTCCGGGGCCSEEESS
T ss_pred ccccchhhHHHHHHh---hhhhhccchhcCcHHHHHHHHHcCCe-----------EEEEeCCCCCcchhhhcCCCEEECC
Confidence 344778899999999 99999999999999999999999973 466776642 2468899999
Q ss_pred HhHHHHHHH
Q 003042 823 TAEVINLLE 831 (854)
Q Consensus 823 ~~eV~~~L~ 831 (854)
..++.++|+
T Consensus 216 l~dL~~iie 224 (224)
T d2hsza1 216 FADILKITQ 224 (224)
T ss_dssp GGGGGGGTC
T ss_pred HHHHHHhhC
Confidence 999887653
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=98.31 E-value=4.2e-07 Score=92.59 Aligned_cols=67 Identities=13% Similarity=0.172 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHhhCCCC-CCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC------------------
Q 003042 753 GIVVKNLISTMRSRGKS-PDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP------------------ 813 (854)
Q Consensus 753 g~al~~ll~~l~~~gi~-~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~------------------ 813 (854)
......+++++ |+. ++++++|||+.+|+.+.+.+|.. +++|.+|..+
T Consensus 159 p~~~~~~~~~l---~~~p~~~~v~VgDs~~Di~aA~~aG~~-----------ti~v~~G~~~~~~~~~~~~~~~~~~~~~ 224 (257)
T d1swva_ 159 PWMCYKNAMEL---GVYPMNHMIKVGDTVSDMKEGRNAGMW-----------TVGVILGSSELGLTEEEVENMDSVELRE 224 (257)
T ss_dssp SHHHHHHHHHH---TCCSGGGEEEEESSHHHHHHHHHTTSE-----------EEEECTTCTTTCCCHHHHHHSCHHHHHH
T ss_pred hHHHHHHHHHh---CCCCcceEEEEeCChhhHHHHHHCCCE-----------EEEEccCCCCCCCCHHHHhhCCHHHHHH
Confidence 45778888888 885 59999999999999999999973 5778877421
Q ss_pred -----------cccceEeCCHhHHHHHHHHH
Q 003042 814 -----------SMAKYYLDDTAEVINLLEGL 833 (854)
Q Consensus 814 -----------s~A~y~l~~~~eV~~~L~~l 833 (854)
..|+|++++..|+..+|+.+
T Consensus 225 ~~~~~~~~l~~~gad~vi~~l~eL~~ii~~~ 255 (257)
T d1swva_ 225 KIEVVRNRFVENGAHFTIETMQELESVMEHI 255 (257)
T ss_dssp HHHHHHHHHHHTTCSEEESSGGGHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEECCHHHHHHHHHHH
Confidence 23999999999999988875
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=98.21 E-value=2.3e-06 Score=84.64 Aligned_cols=69 Identities=16% Similarity=0.105 Sum_probs=51.1
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCCcccceE---eCCHhHHHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYY---LDDTAEVIN 828 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~s~A~y~---l~~~~eV~~ 828 (854)
+...+..+++.+ +++++++++|||+.+|+.+.+++|.. .+.|..|.......+. +.+..++.+
T Consensus 131 ~p~ml~~a~~~~---~i~~~~~~~VGD~~~Di~aA~~AGi~-----------~i~v~~g~~~~~~~~~~~~~~~~~e~~d 196 (209)
T d2o2xa1 131 NPGMLVEAGKRL---ALDLQRSLIVGDKLADMQAGKRAGLA-----------QGWLVDGEAAVQPGFAIRPLRDSSELGD 196 (209)
T ss_dssp SCHHHHHHHHHH---TCCGGGCEEEESSHHHHHHHHHTTCS-----------EEEEETCCCEEETTEEEEEESSHHHHHH
T ss_pred cchhhhHhHHHh---CCCccceEEeCCCHHHHHHHHHCCCc-----------EEEEeCCCCcccCCccccCccchhHHHH
Confidence 455788888888 99999999999999999999999973 2456667654444443 456666666
Q ss_pred HHHHHH
Q 003042 829 LLEGLA 834 (854)
Q Consensus 829 ~L~~l~ 834 (854)
+|+.+-
T Consensus 197 ll~~v~ 202 (209)
T d2o2xa1 197 LLAAIE 202 (209)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665543
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=98.17 E-value=2.1e-07 Score=92.21 Aligned_cols=61 Identities=11% Similarity=0.085 Sum_probs=49.0
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC-----CcccceEeCCHhHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK-----PSMAKYYLDDTAEV 826 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~-----~s~A~y~l~~~~eV 826 (854)
+....+.+++++ |++++++++|||+.+|+.+.+.+|.. +++|..+.. ...|++.+++..|+
T Consensus 146 ~~~~~~~~~~~l---~~~~~~~l~igD~~~di~aA~~~G~~-----------~i~v~~~~~~~~~~~~~a~~~i~~l~el 211 (218)
T d1te2a_ 146 HPQVYLDCAAKL---GVDPLTCVALEDSVNGMIASKAARMR-----------SIVVPAPEAQNDPRFVLANVKLSSLTEL 211 (218)
T ss_dssp STHHHHHHHHHH---TSCGGGEEEEESSHHHHHHHHHTTCE-----------EEECCCTTTTTCGGGGGSSEECSCGGGC
T ss_pred hHHHHHHHHHHc---CCCchhcEEEeeCHHHHHHHHHcCCE-----------EEEECCCCCccchhhcCCCEEECChhhC
Confidence 457799999999 99999999999999999999999972 344433322 25789999998875
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.12 E-value=2.1e-07 Score=91.42 Aligned_cols=64 Identities=13% Similarity=0.134 Sum_probs=54.8
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCCcccceEeCCHhHHHHHHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLE 831 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~s~A~y~l~~~~eV~~~L~ 831 (854)
|....+.+++.+ |++|+++++|||+.+|+.+.+.+|.. +|.+......+++.+++..++.++|+
T Consensus 139 ~~~~~~~~~~~~---~~~p~~~l~VgD~~~Di~~A~~~G~~-------------~i~v~~~~~~~~~~~~~~~dl~~l~~ 202 (204)
T d2go7a1 139 SPEAATYLLDKY---QLNSDNTYYIGDRTLDVEFAQNSGIQ-------------SINFLESTYEGNHRIQALADISRIFE 202 (204)
T ss_dssp SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-------------EEESSCCSCTTEEECSSTTHHHHHTS
T ss_pred hHHHHHHHHHHh---CCCCceEEEEeCCHHHHHHHHHcCCe-------------EEEEcCCCCCcCeecCCHHHHHHHhc
Confidence 778999999999 99999999999999999999999973 55565566778999998888877653
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=98.09 E-value=1.5e-06 Score=82.39 Aligned_cols=47 Identities=15% Similarity=0.339 Sum_probs=37.1
Q ss_pred CeEEEEecCCCCCCCCCC--------CCCCCHHHHHHHHHcccCCCCeEEEEcCCC
Q 003042 585 SRLILLDYDGTVMPQTSE--------DKRPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~--------~~~is~~~~~aL~~L~~~~g~~v~I~TGR~ 632 (854)
.|+||||.||||...... .-.+-+.+.++|+.| ++.|++++++|..+
T Consensus 2 ~K~i~~D~DGtL~~~~~~~~~~~~~~~~~~~pgv~e~L~~L-~~~g~~l~i~TNq~ 56 (161)
T d2fpwa1 2 QKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKL-QKAGYKLVMITNQD 56 (161)
T ss_dssp CEEEEECCBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHH-HHTTEEEEEEEECT
T ss_pred CcEEEEeCCCCeEeeCCCCCccCCHHHceECccHHHHHHHH-HHcCCceeeecccc
Confidence 589999999999974321 113457889999999 88999999999864
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.96 E-value=1.5e-06 Score=87.58 Aligned_cols=73 Identities=15% Similarity=0.155 Sum_probs=57.4
Q ss_pred Ccch--HHHHHHHHHHHhhCCCCCCeEEEEeCCc-ccHHHHHHhhhhcCCCCCCCCccEEEEEecC------CCcccceE
Q 003042 749 GVSK--GIVVKNLISTMRSRGKSPDFVLCIGDDR-SDEDMFESIEQAVADPSVPGIAEVFACTVGQ------KPSMAKYY 819 (854)
Q Consensus 749 gvsK--g~al~~ll~~l~~~gi~~d~vlaiGDs~-ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~------~~s~A~y~ 819 (854)
+..| ....+.+++.+ |++++++++|||+. +|+.+.+.+|.. .+.+..+. ....++|+
T Consensus 161 ~~~KP~p~~~~~~~~~~---~~~~~~~l~iGD~~~~Di~~A~~~G~~-----------~~~~~~~~~~~~~~~~~~p~~~ 226 (247)
T d2gfha1 161 KEEKPAPSIFYHCCDLL---GVQPGDCVMVGDTLETDIQGGLNAGLK-----------ATVWINKSGRVPLTSSPMPHYM 226 (247)
T ss_dssp SSCTTCHHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHTTCS-----------EEEEECTTCCCCSSCCCCCSEE
T ss_pred ccchhhhhhHHHHHHHh---hcCHHhcceeccChHhHHHHHHHcCCe-----------EEEEECCCCCCcccccCCCCEE
Confidence 4455 67889999999 99999999999995 899999999973 12222222 13578999
Q ss_pred eCCHhHHHHHHHHHHh
Q 003042 820 LDDTAEVINLLEGLAT 835 (854)
Q Consensus 820 l~~~~eV~~~L~~l~~ 835 (854)
+++..++.++|+.+-.
T Consensus 227 i~~l~eL~~ll~~i~~ 242 (247)
T d2gfha1 227 VSSVLELPALLQSIDC 242 (247)
T ss_dssp ESSGGGHHHHHHHHTT
T ss_pred ECCHHHHHHHHHHHhh
Confidence 9999999999998754
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=97.70 E-value=5.7e-07 Score=89.17 Aligned_cols=37 Identities=8% Similarity=0.113 Sum_probs=34.4
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+....+.+++.+ |++++++++|||+.+|+.+.+.+|.
T Consensus 147 ~~~~~~~~l~~~---~i~~~~~l~VgD~~~di~~A~~aG~ 183 (221)
T d1o08a_ 147 APDIFIAAAHAV---GVAPSESIGLEDSQAGIQAIKDSGA 183 (221)
T ss_dssp STHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTC
T ss_pred ChHHHHHHHHHc---CCCCceEEEEecCHHHHHHHHHcCC
Confidence 467789999999 9999999999999999999999997
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.66 E-value=0.00012 Score=66.49 Aligned_cols=53 Identities=13% Similarity=0.125 Sum_probs=43.9
Q ss_pred CeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhh
Q 003042 585 SRLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWF 640 (854)
Q Consensus 585 ~klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~ 640 (854)
...+++|-+||++.. ....+.+++.++++.| ++.|+.++++||-.......+.
T Consensus 3 ~~~~~~d~~~~~~~g--~~D~lr~~a~~~I~~L-~~~Gi~v~ilTGD~~~~a~~ia 55 (135)
T d2b8ea1 3 VTAVIFDKTGTLTKG--KPDTLKESAKPAVQEL-KRMGIKVGMITGDNWRSAEAIS 55 (135)
T ss_dssp CCEEEEECCCCCBCS--CCCCBCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHH
T ss_pred EEEEEECCceEEEEe--cCCCCCccHHHHHHHH-HHcCCEEEEEcCcchhhhhHHH
Confidence 468999999999862 2345678888888888 8889999999999998887776
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.65 E-value=5.7e-05 Score=73.55 Aligned_cols=64 Identities=17% Similarity=0.200 Sum_probs=52.0
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCCcccceEeCCHhHHHHHHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKPSMAKYYLDDTAEVINLLE 831 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~s~A~y~l~~~~eV~~~L~ 831 (854)
+....+.+++.+ |++|+++++|||+..|+.+.+.+|.. +|. +.+.....+-|+
T Consensus 161 ~~~~~~~~~~~~---~~~p~e~l~VgD~~~Di~~A~~~G~~-------------ti~-----------v~~~~~~~~~l~ 213 (225)
T d1zd3a1 161 EPQIYKFLLDTL---KASPSEVVFLDDIGANLKPARDLGMV-------------TIL-----------VQDTDTALKELE 213 (225)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHTTCE-------------EEE-----------CSSHHHHHHHHH
T ss_pred HHHHHHHHhhhc---ccCccceeEEecCHHHHHHHHHcCCE-------------EEE-----------ECCcchhHHHHH
Confidence 568899999999 99999999999999999999999973 443 556777788888
Q ss_pred HHHhccCCCCC
Q 003042 832 GLATESVHSKS 842 (854)
Q Consensus 832 ~l~~~~~~~~~ 842 (854)
++.....-..+
T Consensus 214 ~~~~~~l~~~~ 224 (225)
T d1zd3a1 214 KVTGIQLLNTP 224 (225)
T ss_dssp HHHTSCCSSCC
T ss_pred HccCccccCCC
Confidence 88776554433
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=97.48 E-value=2.8e-05 Score=83.96 Aligned_cols=58 Identities=22% Similarity=0.267 Sum_probs=49.9
Q ss_pred CCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCCC---------cccceEeCCHhHHHHHHHHHHh
Q 003042 767 GKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQKP---------SMAKYYLDDTAEVINLLEGLAT 835 (854)
Q Consensus 767 gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~~---------s~A~y~l~~~~eV~~~L~~l~~ 835 (854)
+..++.|+++||+.||++|++.+|.. +++|++|... ..|+|+++++.++.++|..+.+
T Consensus 312 ~~~~~~~~~vGD~~~D~~aak~Ag~~-----------~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il~~l~~ 378 (380)
T d1qyia_ 312 IVNKDDVFIVGDSLADLLSAQKIGAT-----------FIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLLE 378 (380)
T ss_dssp CSCTTTEEEEESSHHHHHHHHHHTCE-----------EEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHSCTTT
T ss_pred CCCCCeEEEECCCHHHHHHHHHCCCC-----------EEEEecCCCCcccHHHHHhCCCCEEECCHHHHHHHHHHHHh
Confidence 78899999999999999999999863 5789898642 2699999999999999887654
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.40 E-value=3.3e-05 Score=74.25 Aligned_cols=35 Identities=17% Similarity=0.015 Sum_probs=29.9
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+....+.+++++ ++ +.+++|||+.+|+.+.+.+|.
T Consensus 136 ~p~~~~~~~~~~---~~--~~~l~vgDs~~Di~aA~~aG~ 170 (187)
T d2fi1a1 136 NPESMLYLREKY---QI--SSGLVIGDRPIDIEAGQAAGL 170 (187)
T ss_dssp SCHHHHHHHHHT---TC--SSEEEEESSHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHc---CC--CCeEEEeCCHHHHHHHHHcCC
Confidence 356788888887 64 569999999999999999987
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.38 E-value=4.5e-05 Score=74.75 Aligned_cols=37 Identities=16% Similarity=0.182 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+....+.+++.+ |++|+++++|||+.+|+.+.+.+|.
T Consensus 159 ~p~~~~~~~~~~---~v~p~~~l~IgD~~~Di~~A~~aG~ 195 (222)
T d1cr6a1 159 EPQIYNFLLDTL---KAKPNEVVFLDDFGSNLKPARDMGM 195 (222)
T ss_dssp CHHHHHHHHHHH---TSCTTSEEEEESSSTTTHHHHHHTC
T ss_pred ChHHHHHHHHHh---CCCcceEEEEECCHHHHHHHHHcCC
Confidence 577889999999 9999999999999999999999997
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.11 E-value=0.00057 Score=64.37 Aligned_cols=158 Identities=18% Similarity=0.278 Sum_probs=96.3
Q ss_pred eEEEEecCCCCCCCCCCCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccchhhhhcCCcccceeecCcEEEEECCCcceE
Q 003042 586 RLILLDYDGTVMPQTSEDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSLGNWFSGVEKLGLSAEHGYFTRWSKNSAWE 665 (854)
Q Consensus 586 klI~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l~liaenG~~I~~~~~~~~~ 665 (854)
-++++|-+|||+-. .-..+-+.+.++|+.| ++.|++++++||=.......+.. .+|+...|- ..+.
T Consensus 3 ~~~~~d~~~~~~~~--~~Dp~R~~~~~~I~~l-~~~GI~v~miTGD~~~tA~~ia~---~~Gi~~~~~--------~v~~ 68 (168)
T d1wpga2 3 SVICSDKTGTLTTN--QLDPPRKEVMGSIQLC-RDAGIRVIMITGDNKGTAIAICR---RIGIFGENE--------EVAD 68 (168)
T ss_dssp CEEEECCTTTTBCC--CECCBCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHH---HTTSSCTTC--------CCTT
T ss_pred EEEEECCccEEEEE--ecCCCchhHHHHHHHH-HHCcCEEEEECCCCHHHHHHHHH---HcCCCCCcc--------cccc
Confidence 36889999999862 1134567888899998 88899999999999998888873 455543221 0000
Q ss_pred EccccccchHHHHHHHHHHHHhccCCcceEecccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCEEEEEcCeEEEE
Q 003042 666 ICSLTRDFDWKEIAEPVMKLYTETTDGSFIEDKETAIVWHHQHADPHFGSCQAKELLDHLENVLANEPVVVKRGQHIVEV 745 (854)
Q Consensus 666 ~~~~~~~~~~~~~v~~~~~~y~~~~~g~~ie~k~~~l~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI 745 (854)
......+.- .. ...+..+.+. .. .-+-++
T Consensus 69 -----~~~~~~~~~----------------------------~~-------~~~~~~~~~~----~~-------~v~ar~ 97 (168)
T d1wpga2 69 -----RAYTGREFD----------------------------DL-------PLAEQREACR----RA-------CCFARV 97 (168)
T ss_dssp -----TEEEHHHHH----------------------------HS-------CHHHHHHHHH----HC-------CEEESC
T ss_pred -----ccccccccc----------------------------hh-------hHHHHhhhhh----hh-------hhhhcc
Confidence 000000000 00 0011111111 11 112233
Q ss_pred eeCCcchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeC
Q 003042 746 KPQGVSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLD 821 (854)
Q Consensus 746 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~ 821 (854)
.|. .|...++.+-+. | ..|.++||+.||.++|+.++. ++++|.. +..|++++-
T Consensus 98 ~p~--~K~~lv~~l~~~----g---~~Va~vGDG~nD~~AL~~Adv--------------GIa~~~gt~~a~~aAdivl~ 154 (168)
T d1wpga2 98 EPS--HKSKIVEYLQSY----D---EITAMTGDGVNDAPALKKAEI--------------GIAMGSGTAVAKTASEMVLA 154 (168)
T ss_dssp CHH--HHHHHHHHHHHT----T---CCEEEEECSGGGHHHHHHSSE--------------EEEETTSCHHHHHTCSEEET
T ss_pred chh--HHHHHHHHHHhc----c---cceeEEecCCCCHHHHHhCCE--------------EEEeccccHHHHHhCCEEEc
Confidence 442 466666655442 3 469999999999999999974 6777764 357888874
Q ss_pred --CHhHHHHHHH
Q 003042 822 --DTAEVINLLE 831 (854)
Q Consensus 822 --~~~eV~~~L~ 831 (854)
+...|.++++
T Consensus 155 ~~~l~~v~~~I~ 166 (168)
T d1wpga2 155 DDNFSTIVAAVE 166 (168)
T ss_dssp TCCTHHHHHHHH
T ss_pred cCCHHHHHHHHH
Confidence 4777777765
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.10 E-value=0.00019 Score=63.94 Aligned_cols=48 Identities=19% Similarity=0.387 Sum_probs=39.6
Q ss_pred eEEEEecCCCCCCCCC---CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCcc
Q 003042 586 RLILLDYDGTVMPQTS---EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKD 634 (854)
Q Consensus 586 klI~~DlDGTLl~~~~---~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~ 634 (854)
|-|+||+||||+.... ....|-+.+++.|+.| .+.|+.++|.|+|...
T Consensus 2 K~i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l-~~~G~~Iii~TaR~~~ 52 (124)
T d1xpja_ 2 KKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREY-HQLGFEIVISTARNMR 52 (124)
T ss_dssp CEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHH-HHTTCEEEEEECTTTT
T ss_pred CEEEEeCCCCeECCCCCCcCccCcCHHHHHHHHHH-HHCCCEEEEEecCCcc
Confidence 5689999999987322 1335789999999999 8999999999999743
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.95 E-value=0.00014 Score=64.89 Aligned_cols=49 Identities=22% Similarity=0.277 Sum_probs=39.4
Q ss_pred EEEEecCCCCCCCCC-CCCCCCHHHHHHHHHcccCCCCeEEEEcCCCccch
Q 003042 587 LILLDYDGTVMPQTS-EDKRPSTEVLSILNDLCNDPKNAVFIVSGRGKDSL 636 (854)
Q Consensus 587 lI~~DlDGTLl~~~~-~~~~is~~~~~aL~~L~~~~g~~v~I~TGR~~~~l 636 (854)
-|++|+||||+.... ....|-+.+++.|++| .+.|+.+++.|+|+....
T Consensus 2 ti~vDiDGTl~~~~~~~~~kPi~~~Ie~l~~L-~~~G~~IIi~TaR~~~~~ 51 (122)
T d2obba1 2 TIAVDFDGTIVEHRYPRIGEEIPFAVETLKLL-QQEKHRLILWSVREGELL 51 (122)
T ss_dssp EEEECCBTTTBCSCTTSCCCBCTTHHHHHHHH-HHTTCEEEECCSCCHHHH
T ss_pred EEEEEcCCCcCCCCCCccccccHHHHHHHHHH-HHCCCeEEEEecCCCcch
Confidence 379999999987331 2245678899999999 899999999999986543
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.61 E-value=0.0011 Score=64.50 Aligned_cols=70 Identities=17% Similarity=0.188 Sum_probs=59.5
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecCC--C--------cccceEeC
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQK--P--------SMAKYYLD 821 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~--~--------s~A~y~l~ 821 (854)
+......+++.+ |++|+++++|||+.+|+.+.+.+|.. +++|+.|.. + ..|+++++
T Consensus 143 ~~~~~~~~~~~l---~~~p~~~l~vgDs~~dv~aA~~aG~~-----------~i~v~~~~~~~~~~~~~l~~~~ad~vi~ 208 (222)
T d2fdra1 143 KPDIFLHGAAQF---GVSPDRVVVVEDSVHGIHGARAAGMR-----------VIGFTGASHTYPSHADRLTDAGAETVIS 208 (222)
T ss_dssp SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEECCSTTCCTTHHHHHHHHTCSEEES
T ss_pred CHHHHHHHHHhh---CCCCceEEEEcCCHHHHHHHHHcCCE-----------EEEEccCCCCCcchHHHHHhCCCCEEEC
Confidence 457889999999 99999999999999999999999973 567777742 1 24899999
Q ss_pred CHhHHHHHHHHHHh
Q 003042 822 DTAEVINLLEGLAT 835 (854)
Q Consensus 822 ~~~eV~~~L~~l~~ 835 (854)
+..++..+|..|++
T Consensus 209 ~l~eL~~ll~~l~~ 222 (222)
T d2fdra1 209 RMQDLPAVIAAMAE 222 (222)
T ss_dssp CGGGHHHHHHHHTC
T ss_pred CHHHHHHHHHHhcC
Confidence 99999999998864
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.11 E-value=0.0042 Score=60.70 Aligned_cols=68 Identities=13% Similarity=0.188 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCC-cccHHHHHHhhhhcCCCCCCCCccEEEEEecCC----CcccceEeCCHhHH
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDD-RSDEDMFESIEQAVADPSVPGIAEVFACTVGQK----PSMAKYYLDDTAEV 826 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs-~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~~----~s~A~y~l~~~~eV 826 (854)
++...+.+++++ |++++++++|||+ .+|+.+.+.+|.. ++.|..+.. ...++|++++..++
T Consensus 157 ~~~~~~~~~~~l---~~~p~~~l~vgD~~~~Di~~A~~~G~~-----------~v~v~~~~~~~~~~~~~d~~i~~l~el 222 (230)
T d1x42a1 157 HPRIFELALKKA---GVKGEEAVYVGDNPVKDCGGSKNLGMT-----------SILLDRKGEKREFWDKCDFIVSDLREV 222 (230)
T ss_dssp SHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHTTTCE-----------EEEECTTSCCGGGGGGSSEEESSTTHH
T ss_pred hhHHHHHHHhhh---cccccccceeecCcHhHHHHHHHcCCE-----------EEEECCCCCCcccccCCCEEECCHHHH
Confidence 467899999999 9999999999998 5899999999873 234433322 35789999999999
Q ss_pred HHHHHHH
Q 003042 827 INLLEGL 833 (854)
Q Consensus 827 ~~~L~~l 833 (854)
.++|++|
T Consensus 223 ~~~l~~l 229 (230)
T d1x42a1 223 IKIVDEL 229 (230)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 9999875
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=95.41 E-value=0.013 Score=57.31 Aligned_cols=66 Identities=14% Similarity=0.186 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEecC---------------------
Q 003042 753 GIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTVGQ--------------------- 811 (854)
Q Consensus 753 g~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~vG~--------------------- 811 (854)
......+++.+ |++|+++++|||+.+|+...+.+|.. +|.+-.
T Consensus 150 p~~f~~a~~~l---g~~p~e~l~VgD~~~di~~A~~aG~~-------------tv~v~r~~~~~~~~~~~~~~~~~~~~~ 213 (245)
T d1qq5a_ 150 PDSYALVEEVL---GVTPAEVLFVSSNGFDVGGAKNFGFS-------------VARVARLSQEALARELVSGTIAPLTMF 213 (245)
T ss_dssp HHHHHHHHHHH---CCCGGGEEEEESCHHHHHHHHHHTCE-------------EEEECCSCHHHHHHHTTSSSCCHHHHH
T ss_pred HHHHHHHHHHh---CCChhhEEEEeCCHHHHHHHHHcCCe-------------EEEEcCCCcccccccccccccccchhh
Confidence 46788899999 99999999999999999999999973 444310
Q ss_pred ---------CCcccceEeCCHhHHHHHHHHHH
Q 003042 812 ---------KPSMAKYYLDDTAEVINLLEGLA 834 (854)
Q Consensus 812 ---------~~s~A~y~l~~~~eV~~~L~~l~ 834 (854)
....++|++++..|+.++|+.++
T Consensus 214 ~~~~~~~~~~~~~pd~~i~~l~el~~lv~~~~ 245 (245)
T d1qq5a_ 214 KALRMREETYAEAPDFVVPALGDLPRLVRGMA 245 (245)
T ss_dssp HHHHSSCCTTSCCCSEEESSGGGHHHHHHHHC
T ss_pred hhhhhhhhhccCCCCEEECCHHHHHHHHHhhC
Confidence 12468999999999999998874
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=95.13 E-value=0.009 Score=57.41 Aligned_cols=65 Identities=14% Similarity=0.137 Sum_probs=51.6
Q ss_pred CcchH--HHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhhcCCCCCCCCccEEEEEe--cC-----CCcccceE
Q 003042 749 GVSKG--IVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQAVADPSVPGIAEVFACTV--GQ-----KPSMAKYY 819 (854)
Q Consensus 749 gvsKg--~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~~~~~~~~~~~~~~aV~v--G~-----~~s~A~y~ 819 (854)
+..|. ...+.+++++ |++|+++++|||+.+|+...+.+|.. +|.+ +. ....|+|+
T Consensus 146 ~~~KP~p~~~~~~~~~~---g~~p~e~l~VgD~~~Di~~A~~aG~~-------------~v~v~r~~~~~~~~~~~~d~~ 209 (220)
T d1zrna_ 146 QVYKPDNRVYELAEQAL---GLDRSAILFVASNAWDATGARYFGFP-------------TCWINRTGNVFEEMGQTPDWE 209 (220)
T ss_dssp TCCTTSHHHHHHHHHHH---TSCGGGEEEEESCHHHHHHHHHHTCC-------------EEEECTTCCCCCSSSCCCSEE
T ss_pred eccccHHHHHHHHHHHh---CCCCceEEEEecChHhHHHHHHcCCE-------------EEEEcCCCCCcccccCCCCEE
Confidence 44454 5888999999 99999999999999999999999973 4443 22 23568999
Q ss_pred eCCHhHHHHH
Q 003042 820 LDDTAEVINL 829 (854)
Q Consensus 820 l~~~~eV~~~ 829 (854)
+++..++.++
T Consensus 210 i~~l~el~~l 219 (220)
T d1zrna_ 210 VTSLRAVVEL 219 (220)
T ss_dssp ESSHHHHHTT
T ss_pred ECCHHHHHhh
Confidence 9999887654
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=93.98 E-value=0.006 Score=58.78 Aligned_cols=70 Identities=17% Similarity=0.230 Sum_probs=53.9
Q ss_pred cccccCHHHHHHHHhhcCCeEEEEecCCCCCCCCC-----------C--------------------CCCCCHHHHHHHH
Q 003042 567 EFRKLGMHHIASAYNKTNSRLILLDYDGTVMPQTS-----------E--------------------DKRPSTEVLSILN 615 (854)
Q Consensus 567 ~f~~l~~~~i~~~y~~~~~klI~~DlDGTLl~~~~-----------~--------------------~~~is~~~~~aL~ 615 (854)
+....+++++.++++..+...|+||+|-|+++..+ . ...+-+.+++.++
T Consensus 17 ~~~w~~~~~i~~~~~g~~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~ 96 (209)
T d2b82a1 17 PIHWVSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLID 96 (209)
T ss_dssp CCEEECHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHH
T ss_pred CcceEEHHHHHHhcCCCCCceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHH
Confidence 34557789999999988888999999999998210 0 0123467888889
Q ss_pred HcccCCCCeEEEEcCCCccchh
Q 003042 616 DLCNDPKNAVFIVSGRGKDSLG 637 (854)
Q Consensus 616 ~L~~~~g~~v~I~TGR~~~~l~ 637 (854)
.+ +++|+.|+.+|||+.....
T Consensus 97 ~~-~~~Gv~IfyVTnR~~~~~e 117 (209)
T d2b82a1 97 MH-VRRGDAIFFVTGRSPTKTE 117 (209)
T ss_dssp HH-HHHTCEEEEEECSCCCSSC
T ss_pred HH-HHcCCeEEEEeCCchhhHH
Confidence 88 8999999999999866443
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.44 E-value=0.012 Score=56.21 Aligned_cols=50 Identities=22% Similarity=0.291 Sum_probs=37.8
Q ss_pred hcCCeEEEEecCCCCCCCCCC--------CC-CCCHHHHHHHHHcccCCCCeEEEEcCCC
Q 003042 582 KTNSRLILLDYDGTVMPQTSE--------DK-RPSTEVLSILNDLCNDPKNAVFIVSGRG 632 (854)
Q Consensus 582 ~~~~klI~~DlDGTLl~~~~~--------~~-~is~~~~~aL~~L~~~~g~~v~I~TGR~ 632 (854)
+.+.|+++||.||||....+. +- -+.+.+.++|+.| .+.|+.++|+|..+
T Consensus 18 ~~~~Kia~fDrDGtLik~~~~~~~~~~~~d~~~l~~~v~~~i~~L-~~~gy~iiIvTNQ~ 76 (195)
T d1yj5a1 18 KPQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQEL-AAEGYKLVIFTNQM 76 (195)
T ss_dssp CCCSCEEEECSBTTTEECSSSCSSCSSTTCCEESCTTHHHHHHHH-HHHTCEEEEEEECH
T ss_pred CCcCcEEEEECCCceEeeCCCCcCCCChhhceeccCCHHHHHHHH-HhCCcEEEEecCcc
Confidence 445799999999999752211 11 1468899999999 78899999999764
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=92.82 E-value=0.032 Score=54.01 Aligned_cols=40 Identities=13% Similarity=0.188 Sum_probs=36.6
Q ss_pred cchHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 750 VSKGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 750 vsKg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
-.+..+...+++++ |++|+++++|||+.+|+...+.+|..
T Consensus 184 KP~p~~~~~~~~~~---~~~p~~~l~vgD~~~dv~aA~~aG~~ 223 (253)
T d1zs9a1 184 KVESESYRKIADSI---GCSTNNILFLTDVTREASAAEEADVH 223 (253)
T ss_dssp TTCHHHHHHHHHHH---TSCGGGEEEEESCHHHHHHHHHTTCE
T ss_pred CCCcHHHHHHHHHh---CCCcCcEEEEeCCHHHHHHHHHcCCE
Confidence 34778999999999 99999999999999999999999973
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=92.59 E-value=1.3 Score=45.80 Aligned_cols=251 Identities=15% Similarity=0.134 Sum_probs=145.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEEeCcccchHHHHHHhccCCCeEEEEecCCCCChhhhhcCCChHHHHHHh--hcCCeE
Q 003042 173 LSANKVFADKVMEVINPDEDYVWIHDYHLMVLPSFLRKRFHRVKVGFFLHSPFPSSEIYRTLPVRDEILKSL--LNSDLI 250 (854)
Q Consensus 173 ~~vN~~fa~~i~~~~~~~~D~vwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~e~~~~lp~r~eil~~l--l~~dli 250 (854)
-.+-..+++ +++..+| |+|.||.=-.-.++.-+.....++||+..-= =-.+.++.. |..++..|-+ --||+-
T Consensus 74 ~~~~~~~~~-~l~~~kP--D~vlv~GDr~e~la~a~aa~~~~ipi~Hieg-G~rsg~~~~--~~~de~~R~~iskls~~h 147 (373)
T d1v4va_ 74 ARILPQAAR-ALKEMGA--DYVLVHGDTLTTFAVAWAAFLEGIPVGHVEA-GLRSGNLKE--PFPEEANRRLTDVLTDLD 147 (373)
T ss_dssp HHHHHHHHH-HHHHTTC--SEEEEESSCHHHHHHHHHHHHTTCCEEEETC-CCCCSCTTS--STTHHHHHHHHHHHCSEE
T ss_pred HHHHHHHhh-hhhhcCc--ccccccccCccchhHHHHHHHhhhhheeecc-ccccccccc--Ccchhhhhhhhcccccee
Confidence 344445544 4566688 8999998888888877777777888874311 011122211 3445555533 136666
Q ss_pred eecCHHHHHHHHHHHHhhhCccccccCceeeEEECCeEEEEEEeccccCchHHHhhhCCchHHHHHHHHHHH----cCCC
Q 003042 251 GFHTFDYARHFLSSCSRMLGLNYESKRGYIGLDYFGRTVSIKILPVGIHMGQFESIMSLDVTGQKVKELKEK----FDGK 326 (854)
Q Consensus 251 gf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~i~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~----~~~~ 326 (854)
---|..+.++.++ +|.+. .+ +..-| -+++|- +.. ...+.+. ..++
T Consensus 148 f~~t~~~~~~L~~-----~Ge~~--~~----I~~vG--------~p~~D~--i~~----------~~~~~~~~~~~~~~~ 196 (373)
T d1v4va_ 148 FAPTPLAKANLLK-----EGKRE--EG----ILVTG--------QTGVDA--VLL----------AAKLGRLPEGLPEGP 196 (373)
T ss_dssp EESSHHHHHHHHT-----TTCCG--GG----EEECC--------CHHHHH--HHH----------HHHHCCCCTTCCSSC
T ss_pred eecchhhhhhhhh-----hcccc--cc----eeecc--------cchhhH--HHh----------hhhhccccccccccc
Confidence 6667777777664 23221 11 11111 123332 110 1111111 1356
Q ss_pred EEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCCccEEE
Q 003042 327 IVILGVDDMDLFKGISLKFLAMGQLLEQHPDLRGKVVLVQITNPARSSGKDVQDLLSDTNRIAEEINLNFGKPGYEPIVI 406 (854)
Q Consensus 327 ~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~v~~~v~~In~~~~~~~~~pv~~ 406 (854)
.+++..-|-...+.....+.++..+.+..++.. ++....+ . +. ....+.+ .... ...+.+
T Consensus 197 ~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~----~i~p~~~---~-~~---~~~~~~~----~~~~-----~~n~~~ 256 (373)
T d1v4va_ 197 YVTVTMHRRENWPLLSDLAQALKRVAEAFPHLT----FVYPVHL---N-PV---VREAVFP----VLKG-----VRNFVL 256 (373)
T ss_dssp EEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSE----EEEECCS---C-HH---HHHHHHH----HHTT-----CTTEEE
T ss_pred ceeEEeccccccchHHHHHHHHHHHhhhcccce----eeeeecc---c-cc---chhhhhh----hhcc-----ccccee
Confidence 778888998888899999999999988887653 4433321 1 11 1111111 1111 223554
Q ss_pred EcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCcccccc-C-CC
Q 003042 407 IKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGCSPS-L-SG 484 (854)
Q Consensus 407 ~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~-l-~~ 484 (854)
+ .++++.+...+++.|++++=.|- -...||.+.+ -|+|.-...|-.++ + .|
T Consensus 257 ~-~~l~~~~~l~ll~~s~~vignSs-----sgi~Ea~~lg---------------------~P~Inir~~~eRqeg~~~g 309 (373)
T d1v4va_ 257 L-DPLEYGSMAALMRASLLLVTDSG-----GLQEEGAALG---------------------VPVVVLRNVTERPEGLKAG 309 (373)
T ss_dssp E-CCCCHHHHHHHHHTEEEEEESCH-----HHHHHHHHTT---------------------CCEEECSSSCSCHHHHHHT
T ss_pred e-ccchHHHHHHHhhhceeEecccc-----hhhhcchhhc---------------------CcEEEeCCCccCHHHHhcC
Confidence 4 47999999999999999887762 2445888873 36665555554443 3 34
Q ss_pred ceEeCCCCHHHHHHHHHHHhcCC
Q 003042 485 AIRVNPWNVDAVADAMDSALQME 507 (854)
Q Consensus 485 ai~vnP~d~~~~A~ai~~aL~m~ 507 (854)
...+-+.|.+++..++..+|..+
T Consensus 310 ~nvlv~~d~~~I~~~i~~~l~~~ 332 (373)
T d1v4va_ 310 ILKLAGTDPEGVYRVVKGLLENP 332 (373)
T ss_dssp SEEECCSCHHHHHHHHHHHHTCH
T ss_pred eeEEcCCCHHHHHHHHHHHHcCH
Confidence 33344569999999999998754
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=92.07 E-value=0.05 Score=50.11 Aligned_cols=37 Identities=11% Similarity=0.209 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQ 791 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~ 791 (854)
+....+.+++.+ |++++++++|||+.+|+...+.+|.
T Consensus 143 ~~~~~~~~~~~~---~~~~~~~l~vgDs~~di~~A~~aG~ 179 (197)
T d2b0ca1 143 EARIYQHVLQAE---GFSPSDTVFFDDNADNIEGANQLGI 179 (197)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred chHHHHHHHHhc---CCCCCeEEEEeCCHHHHHHHHHcCC
Confidence 677889999999 9999999999999999999999997
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=86.60 E-value=1.2 Score=45.05 Aligned_cols=89 Identities=13% Similarity=0.099 Sum_probs=57.9
Q ss_pred EEcCCCChhhHHHHHHhCcEEEEccCccCCCCcceeeeeeecCCCccccccCCCCCCCCCCCceEEEecCccc-------
Q 003042 406 IIKEPLSTQDKVPYYAIAECCVVNCVRDGMNLVPYKYTVSRQGSPVLDRALGVDEKNPPQKKSVIIVSEFIGC------- 478 (854)
Q Consensus 406 ~~~~~~~~~el~aly~~ADv~vv~S~~EG~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~------- 478 (854)
.+.+.+++.+ ++..+|+||..+ |.| +..|+++|+ .|+|+.-+.+.
T Consensus 273 ~i~~~~p~~~---ll~~a~~~v~hg---G~~-t~~Eal~~G---------------------~P~v~~P~~~d~~~eQ~~ 324 (391)
T d1pn3a_ 273 FVVGEVNLQE---LFGRVAAAIHHD---SAG-TTLLAMRAG---------------------IPQIVVRRVVDNVVEQAY 324 (391)
T ss_dssp CEESSCCHHH---HHTTSSCEEEES---CHH-HHHHHHHHT---------------------CCEEEECSSCCBTTBCCH
T ss_pred EEecccCHHH---HHhhccEEEecC---chH-HHHHHHHhC---------------------CcEEEeccccCCcchHHH
Confidence 4566777654 567899999664 555 678999994 47777665553
Q ss_pred -cccC---CCceEeCCCC--HHHHHHHHHHHhcCCHHHHHHHHHHHhcccccc
Q 003042 479 -SPSL---SGAIRVNPWN--VDAVADAMDSALQMENQEKILRHEKHYKYISSH 525 (854)
Q Consensus 479 -~~~l---~~ai~vnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 525 (854)
++.+ ..|+.+++.+ .++++++|.++|+.+- +.+.+++.+.++..
T Consensus 325 nA~~l~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~---r~~a~~~a~~~~~~ 374 (391)
T d1pn3a_ 325 HADRVAELGVGVAVDGPVPTIDSLSAALDTALAPEI---RARATTVADTIRAD 374 (391)
T ss_dssp HHHHHHHHTSEEEECCSSCCHHHHHHHHHHHTSTTH---HHHHHHHGGGSCSC
T ss_pred HHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHhCHHH---HHHHHHHHHHHHhc
Confidence 2223 3467776654 7999999999986432 23344555555543
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=86.45 E-value=0.24 Score=46.66 Aligned_cols=38 Identities=18% Similarity=0.257 Sum_probs=34.9
Q ss_pred hHHHHHHHHHHHhhCCCCCCeEEEEeCCcccHHHHHHhhhh
Q 003042 752 KGIVVKNLISTMRSRGKSPDFVLCIGDDRSDEDMFESIEQA 792 (854)
Q Consensus 752 Kg~al~~ll~~l~~~gi~~d~vlaiGDs~ND~~Mf~~ag~~ 792 (854)
...+...+++++ |++|+++++|||+.+|+...+.+|..
T Consensus 161 ~p~~f~~~~~~l---g~~p~e~l~VgD~~~Dv~~A~~aG~~ 198 (225)
T d2g80a1 161 ETQSYANILRDI---GAKASEVLFLSDNPLELDAAAGVGIA 198 (225)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHTTTCE
T ss_pred ChhHhHHHHHhc---ccCchhceeecCCHHHHHHHHHcCCE
Confidence 467889999999 99999999999999999999999973
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=82.04 E-value=0.22 Score=47.83 Aligned_cols=15 Identities=20% Similarity=0.355 Sum_probs=14.2
Q ss_pred CCeEEEEecCCCCCC
Q 003042 584 NSRLILLDYDGTVMP 598 (854)
Q Consensus 584 ~~klI~~DlDGTLl~ 598 (854)
|+|.|+||+||||++
T Consensus 1 MIKaviFD~dGTL~d 15 (245)
T d1qq5a_ 1 MIKAVVFDAYGTLFD 15 (245)
T ss_dssp CCCEEEECTBTTTBC
T ss_pred CCeEEEEeCCCCcEe
Confidence 689999999999998
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=81.58 E-value=0.15 Score=48.40 Aligned_cols=14 Identities=36% Similarity=0.665 Sum_probs=13.0
Q ss_pred CeEEEEecCCCCCC
Q 003042 585 SRLILLDYDGTVMP 598 (854)
Q Consensus 585 ~klI~~DlDGTLl~ 598 (854)
.|+|+||+||||++
T Consensus 2 ~kaviFD~DGtL~d 15 (222)
T d2fdra1 2 FDLIIFDCDGVLVD 15 (222)
T ss_dssp CSEEEECSBTTTBC
T ss_pred ceEEEECCCCcccC
Confidence 58899999999998
|