Citrus Sinensis ID: 003131

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-----
Protein Sequence
MMALSNRDLQLTELNGGGSSDGDDREDEWLLNNYDGKKERIGDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVID
Secondary Structure (PSIPRED)
cccccccccccEEccccccccccccccHHccccccccccccccccEEEEEEEcccccHHHHHHHHHHHccccccEEEEEEccccEEEEEEccccccHHHHHHHHHHcccccEEcccccccccccccccccEEEEcccccHHHHHHHHHHHcccccccEEEEcccccEEEEEEccccccHHHHHHHHHHcccccccccccccEEEEEEEcccccHHHHHHHHHHHcccccEEEEEEEccccEEEEEEccccccHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccEEcHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccEEEEEEccccccccEEEEEEccccccccEEEEccccccccccEEEEccccccccccccccccccccccccEEEEEEcccEEEEEEEEEcccHHHHHHHHHHHHHHcccccHHHHHHcHHccccHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHEEEEEccccccccHHHHHHHHHccHHcccccEEcccHHHHHcccccEEEEccccccccccEEEEEEEEcccccHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccEEEccccEEEEEEccEEEEEccHHHHHHccccccHHHHHHHHHHHHcccEEEEEEEccEEEEEEEEcccccccHHHHHHHHHHccccEEEEccccHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEcccccccccccccccccHHHHHccccccccccccEEEEEEEEcccHHHHHHHHHHHHHccccEEEEEEEccccEEEEEEccccccHHHHHHHHHHcccccEEccccccccccccccEEEEEEEEcccHHHHHHHHHHHHHccccEEEEEEEEcccEEEEEEccccccHHHHHHHHHHcccccEEEccccccEEEEEEEcccHHHHHHHHHHHHHccccEEEEEEEccccEEEEEEccccccHHHHHHHHHHcccccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccEEEEEEcccccEEEEEEEEHHHEccccEEEEEcccccccccEEEEcccccccccccccccccccccccEEEEEEEccccEEEEEEEEccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHcccccccccccEEEEcccHcccccEEEEccHHHHHHcccEEEEEEccccEcccccEEEEEEEcccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccccEcccccccccccccccHccccccccEEEEEcccEEEEccHHHHHHccccccHHHHHHHHHHHHccccEEEEEEccEEEEEEEEEccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
mmalsnrdlqltelngggssdgddredewllnnydgkkerigdgmRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQnkadvvfdpdlvkdeDIKNAIEDAGFEAEILaesstsgpkpqgtivgqytiGGMTCAACVNSVEGILRGLPGVKRAVVALATSlgeveydptviskdDIANAIEDagfeasfvqssgqdkILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISgelevlfdpealssrslvdgiagrsngkfqirvmnpfarmtsrdseeTSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWrcgpflmgdwLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVtgfwsptyfeTSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQsgdtlkvlpgtklpadgiVVWGTSYVnesmvtgeavpvlkeinspviggtinLHGVLHIQATKVGSDAVLSQIISLVETaqmskapiqKFADFVASIFVPIVVTLALFTWLCWYVAgvlgaypeqwlpengtHFVFALMFSISVVVIACpcalglatpTAVMVATGvganngvlikggDALERAQKIKYVIFdktgtltqgratvTTAKVFTKMDRGEFLTLVASaeassehpLAKAVVEYARHfhffddpslnpdgqshskestgsgwlldvsdfsalpgrgiqcfisgkqvLVGNRKllnesgitipdHVESFVVELEESARTGILvayddnligvmgiadpvKREAAVVVEGLLKmgvrpvmvtgdnwrTAHAVAREVCVID
Flexible Loop (DISEMBL)
mmalsnrdlqltelngggssdgddredeWLLNnydgkkerigdgMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKadvvfdpdlvKDEDIKNAIEDAGFEAEILaesstsgpkpqgTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATslgeveydptvISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDgiagrsngkfqirvmnpfARMTSRDSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAgralrngsTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVElapatallvvKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVifdktgtltqgratvttakvftkmDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKmgvrpvmvtgdnwrtahavarevcvid
Low Complexity Region (SEG)
MMALSNRDLQLTELNgggssdgddredeWLLNNYDGKKERIGDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVID
Disordered region (IsUnstruct)
****************************WLLNNYDGKKERIGDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI************GTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPF************NMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEA***HPLAKAVVEYARHFHFFD******************GWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI*
Disordered Region (DISOPRED)
************************************************QVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNG***********************MFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI*
Disordered Region (DISEMBL)
MMALSNRDLQLTELN********DREDEWLLNNYDGKKERIGDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNP**********GSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVID
Disordered Region (DISPRO)
MMA*SNRDLQLTELN**********EDEW************GDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAE*S******QGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVID
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMALSNRDLQLTELNGGGSSDGDDREDEWLLNNYDGKKERIGDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVID
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	845	2.2.26 [Sep-21-2011]
Q9S7J8	1001	Copper-transporting ATPas	yes	no	0.990	0.836	0.750	0.0
Q9SH30	995	Putative copper-transport	no	no	0.918	0.779	0.446	0.0
P35670	1465	Copper-transporting ATPas	yes	no	0.912	0.526	0.365	1e-137
P70705	1492	Copper-transporting ATPas	yes	no	0.914	0.518	0.348	1e-133
Q9XT50	1505	Copper-transporting ATPas	N/A	no	0.911	0.511	0.357	1e-132
Q04656	1500	Copper-transporting ATPas	no	no	0.908	0.512	0.350	1e-132
Q64430	1491	Copper-transporting ATPas	yes	no	0.910	0.515	0.345	1e-131
Q64446	1462	Copper-transporting ATPas	no	no	0.908	0.525	0.358	1e-130
Q64535	1451	Copper-transporting ATPas	no	no	0.910	0.529	0.352	1e-127
Q4L970	795	Copper-exporting P-type A	yes	no	0.757	0.805	0.383	1e-127

>sp|Q9S7J8|HMA7_ARATH Copper-transporting ATPase RAN1 OS=Arabidopsis thaliana GN=RAN1 PE=1 SV=1

 Score = 1317 bits (3409), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/855 (75%), Positives = 737/855 (86%), Gaps = 18/855 (2%)

Query: 2   MALSNRDLQLTELNGGGSSDGDDREDEWLLNNYDGKKE-----------RIGDGMRRIQV 50
           MA S RDLQLT + GG SS   D E+  LL++Y  +             R   G+R+IQV
Sbjct: 1   MAPSRRDLQLTPVTGGSSSQISDMEEVGLLDSYHNEANADDILTKIEEGRDVSGLRKIQV 60

Query: 51  GVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFE 110
           GVTGMTCAACSNSVE ALM + GV KASVALLQN+ADVVFDP+LVK+EDIK AIEDAGFE
Sbjct: 61  GVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEAIEDAGFE 120

Query: 111 AEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEV 170
           AEILAE  T     Q T+VGQ+TIGGMTCAACVNSVEGILR LPGVKRAVVAL+TSLGEV
Sbjct: 121 AEILAEEQT-----QATLVGQFTIGGMTCAACVNSVEGILRDLPGVKRAVVALSTSLGEV 175

Query: 171 EYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGV 230
           EYDP VI+KDDI NAIEDAGFE S VQS+ QDK++L+V G+L ELDA  LEGIL+   GV
Sbjct: 176 EYDPNVINKDDIVNAIEDAGFEGSLVQSNQQDKLVLRVDGILNELDAQVLEGILTRLNGV 235

Query: 231 RQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNM 290
           RQFR D+ISGELEV+FDPE +SSRSLVDGI     GKF++RVM+P+ R++S+D+ E SNM
Sbjct: 236 RQFRLDRISGELEVVFDPEVVSSRSLVDGIEEDGFGKFKLRVMSPYERLSSKDTGEASNM 295

Query: 291 FRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRF 350
           FR FISSL LSIP+FFI+VICPHI L  ALL+WRCGPF+MGDWL WALVSV+QFVIGKRF
Sbjct: 296 FRRFISSLVLSIPLFFIQVICPHIALFDALLVWRCGPFMMGDWLKWALVSVIQFVIGKRF 355

Query: 351 YTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLF 410
           Y AA RALRNGSTNMDVLVALGTSA+YFYSVGALLYG VTGFWSPTYF+ SAMLITFVL 
Sbjct: 356 YVAAWRALRNGSTNMDVLVALGTSASYFYSVGALLYGAVTGFWSPTYFDASAMLITFVLL 415

Query: 411 GKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPG 470
           GKYLE LAKGKTSDA+KKLV+L PATA+L+ + K GK + EREIDALLIQ GDTLKV PG
Sbjct: 416 GKYLESLAKGKTSDAMKKLVQLTPATAILLTEGKGGKLVGEREIDALLIQPGDTLKVHPG 475

Query: 471 TKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVL 530
            K+PADG+VVWG+SYVNESMVTGE+VPV KE++SPVIGGTIN+HG LH++ATKVGSDAVL
Sbjct: 476 AKIPADGVVVWGSSYVNESMVTGESVPVSKEVDSPVIGGTINMHGALHMKATKVGSDAVL 535

Query: 531 SQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPEN 590
           SQIISLVETAQMSKAPIQKFAD+VASIFVP+V+TLALFT + W + G +GAYP++WLPEN
Sbjct: 536 SQIISLVETAQMSKAPIQKFADYVASIFVPVVITLALFTLVGWSIGGAVGAYPDEWLPEN 595

Query: 591 GTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYV 650
           GTHFVF+LMFSISVVVIACPCALGLATPTAVMVATGVGA NGVLIKGGDALE+A K+KYV
Sbjct: 596 GTHFVFSLMFSISVVVIACPCALGLATPTAVMVATGVGATNGVLIKGGDALEKAHKVKYV 655

Query: 651 IFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDD 710
           IFDKTGTLTQG+ATVTT KVF++MDRGEFLTLVASAEASSEHPLAKA+V YARHFHFFD+
Sbjct: 656 IFDKTGTLTQGKATVTTTKVFSEMDRGEFLTLVASAEASSEHPLAKAIVAYARHFHFFDE 715

Query: 711 PSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPD 770
            +   DG++++K+   SGWLLD SDFSALPG+GIQC ++ K +LVGNRKL++E+ I IPD
Sbjct: 716 ST--EDGETNNKDLQNSGWLLDTSDFSALPGKGIQCLVNEKMILVGNRKLMSENAINIPD 773

Query: 771 HVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDN 830
           HVE FV +LEES +TG++VAY+  L+GVMGIADP+KREAA+VVEGLL+MGVRP+MVTGDN
Sbjct: 774 HVEKFVEDLEESGKTGVIVAYNGKLVGVMGIADPLKREAALVVEGLLRMGVRPIMVTGDN 833

Query: 831 WRTAHAVAREVCVID 845
           WRTA AVA+EV + D
Sbjct: 834 WRTARAVAKEVGIED 848

Involved in copper import into the cell. Essential for ethylene signaling, which requires copper. Acts by delivering copper to create functional hormone receptors.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 4

>sp|Q9SH30|HMA5_ARATH Putative copper-transporting ATPase HMA5 OS=Arabidopsis thaliana GN=HMA5 PE=2 SV=2

 Score =  677 bits (1748), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/813 (44%), Positives = 511/813 (62%), Gaps = 37/813 (4%)

Query: 41  IGDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDI 100
           I D + R    V GMTC+AC+ SVE A+  L G+  A +  L N+A ++F P+ V  E I
Sbjct: 46  IDDPISRAVFQVLGMTCSACAGSVEKAIKRLPGIHDAVIDALNNRAQILFYPNSVDVETI 105

Query: 101 KNAIEDAGFEAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAV 160
           +  IEDAGFEA ++   +    +     V +  I GMTC +C +++E +L+ + GV+RA 
Sbjct: 106 RETIEDAGFEASLIENEANERSRQ----VCRIRINGMTCTSCSSTIERVLQSVNGVQRAH 161

Query: 161 VALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQD--KILLQVTGVLCELDAH 218
           VALA    E+ YDP + S D +   IE+AGFEA  + S+G+D  KI L++ G L +    
Sbjct: 162 VALAIEEAEIHYDPRLSSYDRLLEEIENAGFEAVLI-STGEDVSKIDLKIDGELTDESMK 220

Query: 219 FLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFAR 278
            +E  L    GV+       + ++ VL+ P+    R+ +  I     G         F+ 
Sbjct: 221 VIERSLEALPGVQSVEISHGTDKISVLYKPDVTGPRNFIQVIESTVFGHSGHIKATIFSE 280

Query: 279 ----MTSRDSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFL-MGDW 333
                 S+   E    ++ F+ SL  ++PVF   ++  +IP +  LL+++    L +G+ 
Sbjct: 281 GGVGRESQKQGEIKQYYKSFLWSLVFTVPVFLTAMVFMYIPGIKDLLMFKVINMLTVGEI 340

Query: 334 LNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFW 393
           +   L + VQFVIG RFYT + +ALR GS NMDVL+ALGT+AAYFYS    LY V+    
Sbjct: 341 IRCVLATPVQFVIGWRFYTGSYKALRRGSANMDVLIALGTNAAYFYS----LYTVLRAAT 396

Query: 394 SPTY-----FETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKC 448
           SP +     FETSAMLI+F++ GKYLE++AKGKTS AI KL+ LAP TA+L+  DK G  
Sbjct: 397 SPDFKGVDFFETSAMLISFIILGKYLEVMAKGKTSQAIAKLMNLAPDTAILLSLDKEGNV 456

Query: 449 IEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIG 508
             E EID  LIQ  D +K++PG K+ +DG V+WG S+VNESM+TGEA PV K     VIG
Sbjct: 457 TGEEEIDGRLIQKNDVIKIVPGAKVASDGYVIWGQSHVNESMITGEARPVAKRKGDTVIG 516

Query: 509 GTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALF 568
           GT+N +GVLH++ T+VGS++ L+QI+ LVE+AQ++KAP+QK AD ++  FVP+V+ L+  
Sbjct: 517 GTLNENGVLHVKVTRVGSESALAQIVRLVESAQLAKAPVQKLADRISKFFVPLVIFLSFS 576

Query: 569 TWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVG 628
           TWL W++AG L  YPE W+P +   F  AL F ISV+VIACPCALGLATPTAVMV TGVG
Sbjct: 577 TWLAWFLAGKLHWYPESWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVG 636

Query: 629 ANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEA 688
           A+ GVLIKGG ALERA K+  ++FDKTGTLT G+  V   K+   M   EF  LVA+ E 
Sbjct: 637 ASQGVLIKGGQALERAHKVNCIVFDKTGTLTMGKPVVVKTKLLKNMVLREFYELVAATEV 696

Query: 689 SSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFI 748
           +SEHPLAKA+VEYA+ F    D   NP             W  +  DF ++ G+G++  +
Sbjct: 697 NSEHPLAKAIVEYAKKFR---DDEENP------------AW-PEACDFVSITGKGVKATV 740

Query: 749 SGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKRE 808
            G++++VGN+ L+N+  + IPD  E  + + E+ A+TGILV+ +  LIGV+ ++DP+K  
Sbjct: 741 KGREIMVGNKNLMNDHKVIIPDDAEELLADSEDMAQTGILVSINSELIGVLSVSDPLKPS 800

Query: 809 AAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREV 841
           A   +  L  M ++ +MVTGDNW TA+++AREV
Sbjct: 801 AREAISILKSMNIKSIMVTGDNWGTANSIAREV 833

Involved in copper import into the cell.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 4

>sp|P35670|ATP7B_HUMAN Copper-transporting ATPase 2 OS=Homo sapiens GN=ATP7B PE=1 SV=4

 Score =  489 bits (1260), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 326/893 (36%), Positives = 465/893 (52%), Gaps = 122/893 (13%)

Query: 50   VGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGF 109
            + + GMTCA+C +S+EG +  L+GV + SV+L +  A V+++P ++  E+++ AIED GF
Sbjct: 363  IAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPSVISPEELRAAIEDMGF 422

Query: 110  EAEILAESSTSGP------------------------------------------KPQGT 127
            EA +++ES ++ P                                           PQ T
Sbjct: 423  EASVVSESCSTNPLGNHSAGNSMVQTTDGTPTSVQEVAPHTGRLPANHAPDILAKSPQST 482

Query: 128  --IVGQ---YTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDI 182
              +  Q     I GMTCA+CV+++E  L+   GV   +VAL     E++YDP VI   +I
Sbjct: 483  RAVAPQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEI 542

Query: 183  ANAIEDAGFEASFVQS-SGQD-KILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISG 240
            A  I+D GFEA+ ++  +G D  I L +TG+ C    H +E  L+   G+        + 
Sbjct: 543  AQFIQDLGFEAAVMEDYAGSDGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATS 602

Query: 241  ELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNMFRLFISSLFL 300
            +  V FDPE +  R ++  I         +   NP A       E      + F+ SL  
Sbjct: 603  KALVKFDPEIIGPRDIIK-IIEEIGFHASLAQRNPNAHHLDHKME-IKQWKKSFLCSLVF 660

Query: 301  SIPV--FFIRVICP-HIPLVYALLLWRCGPFL-MGDWLNWALVSVVQFVIGKRFYTAAGR 356
             IPV    I ++ P + P    +L     P L + + + + L + VQ + G  FY  A +
Sbjct: 661  GIPVMALMIYMLIPSNEPHQSMVLDHNIIPGLSILNLIFFILCTFVQLLGGWYFYVQAYK 720

Query: 357  ALRNGSTNMDVLVALGTSAAYFYSVGALLYGVV-TGFWSP-TYFETSAMLITFVLFGKYL 414
            +LR+ S NMDVL+ L TS AY YS+  L+  V      SP T+F+T  ML  F+  G++L
Sbjct: 721  SLRHRSANMDVLIVLATSIAYVYSLVILVVAVAEKAERSPVTFFDTPPMLFVFIALGRWL 780

Query: 415  EILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLP 474
            E LAK KTS+A+ KL+ L    A +V   +    I E ++   L+Q GD +KV+PG K P
Sbjct: 781  EHLAKSKTSEALAKLMSLQATEATVVTLGEDNLIIREEQVPMELVQRGDIVKVVPGGKFP 840

Query: 475  ADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQII 534
             DG V+ G +  +ES++TGEA+PV K+  S VI G+IN HG + I+AT VG+D  L+QI+
Sbjct: 841  VDGKVLEGNTMADESLITGEAMPVTKKPGSTVIAGSINAHGSVLIKATHVGNDTTLAQIV 900

Query: 535  SLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLG-AYPEQWLPENGTH 593
             LVE AQMSKAPIQ+ AD  +  FVP ++ ++  T + W V G +     +++ P    H
Sbjct: 901  KLVEEAQMSKAPIQQLADRFSGYFVPFIIIMSTLTLVVWIVIGFIDFGVVQRYFPNPNKH 960

Query: 594  FV-------FALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQK 646
                     FA   SI+V+ IACPC+LGLATPTAVMV TGV A NG+LIKGG  LE A K
Sbjct: 961  ISQTEVIIRFAFQTSITVLCIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHK 1020

Query: 647  IKYVIFDKTGTLTQGRATVTTAKVF---TKMDRGEFLTLVASAEASSEHPLAKAVVEYAR 703
            IK V+FDKTGT+T G   V    +      +   + L +V +AEASSEHPL  AV +Y  
Sbjct: 1021 IKTVMFDKTGTITHGVPRVMRVLLLGDVATLPLRKVLAVVGTAEASSEHPLGVAVTKYC- 1079

Query: 704  HFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQ----------- 752
                              KE  G+  L   +DF A+PG GI C +S  +           
Sbjct: 1080 ------------------KEELGTETLGYCTDFQAVPGCGIGCKVSNVEGILAHSERPLS 1121

Query: 753  ------------------------VLVGNRKLLNESGITIPDHVESFVVELEESARTGIL 788
                                    VL+GNR+ L  +G+TI   V   + + E   +T IL
Sbjct: 1122 APASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGLTISSDVSDAMTDHEMKGQTAIL 1181

Query: 789  VAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREV 841
            VA D  L G++ IAD VK+EAA+ V  L  MGV  V++TGDN +TA A+A +V
Sbjct: 1182 VAIDGVLCGMIAIADAVKQEAALAVHTLQSMGVDVVLITGDNRKTARAIATQV 1234

Involved in the export of copper out of the cells, such as the efflux of hepatic copper into the bile.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 4

>sp|P70705|ATP7A_RAT Copper-transporting ATPase 1 OS=Rattus norvegicus GN=Atp7a PE=1 SV=1

 Score =  474 bits (1221), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 316/907 (34%), Positives = 466/907 (51%), Gaps = 134/907 (14%)

Query: 46   RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIE 105
            + + + + GMTC +C  S+EG +    GV    V+L  +   + +DP L   E ++ AIE
Sbjct: 377  QEVVININGMTCNSCVQSIEGVISKKPGVKSIHVSLTNSTGTIEYDPLLTSPEPLREAIE 436

Query: 106  DAGFEAEILAE------------------SSTSGPKPQGTIVGQ---YTIGGMTCAACVN 144
            D GF+A + A+                   ST+ P+   T V       + GMTCA+CV 
Sbjct: 437  DMGFDAVLPADMKEPLVVIAQPSLETPLLPSTTEPENVMTPVQNKCYIQVSGMTCASCVA 496

Query: 145  SVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKI 204
            ++E  LR   G+   +VAL     EV Y+P VI    IA  I + GF A  ++++G+   
Sbjct: 497  NIERNLRREEGIYSVLVALMAGKAEVRYNPAVIQPRVIAELIRELGFGAVVMENAGEGNG 556

Query: 205  LLQ--VTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAG 262
            +L+  V G+ C    H +E  L+  KG+        + +  + +DPE +  R ++  I  
Sbjct: 557  ILELVVRGMTCASCVHKIESTLTKHKGIFYCSVALATNKAHIKYDPEIIGPRDIIHTIG- 615

Query: 263  RSNGKFQIRVMNPFARMTSRDSEETSNMFR-LFISSLFLSIPVF----FIRVICPH---- 313
              N  F+  ++         D +     +R  F+ SLF  IPV     ++ V+  H    
Sbjct: 616  --NLGFEASLVKKDRSANHLDHKREIKQWRGSFLVSLFFCIPVMGLMIYMMVMDHHLATL 673

Query: 314  -----------IPLVYALLLWR---CGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALR 359
                       I +  ++ L R    G  +M + L+  L   VQF  G  FY  A +ALR
Sbjct: 674  NHNQNMSNEEMINMHSSMFLERQILPGLSIM-NLLSLLLCLPVQFCGGWYFYIQAYKALR 732

Query: 360  NGSTNMDVLVALGTSAAYFYSVGALLYGVVT-GFWSP-TYFETSAMLITFVLFGKYLEIL 417
            + + NMDVL+ L T+ A+ YS+  LL  +      +P T+F+T  ML  F+  G++LE +
Sbjct: 733  HKTANMDVLIVLATTIAFAYSLVILLVAMYERAKVNPITFFDTPPMLFVFIALGRWLEHI 792

Query: 418  AKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADG 477
            AKGKTS+A+ KL+ L    A +V  +     + E ++D  L+Q GD +KV+PG K P DG
Sbjct: 793  AKGKTSEALAKLISLQATEATIVTLNSENLLLSEEQVDVELVQRGDIIKVVPGGKFPVDG 852

Query: 478  IVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLV 537
             V+ G S V+ES++TGEA+PV K+  S VI G+IN +G L I+AT VG+D  LSQI+ LV
Sbjct: 853  RVIEGHSMVDESLITGEAMPVAKKPGSTVIAGSINQNGSLLIRATHVGADTTLSQIVKLV 912

Query: 538  ETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAG------VLGAYP--EQWLPE 589
            E AQ SKAPIQ+FAD ++  FVP +V +++ T L W + G      V   +P   + +  
Sbjct: 913  EEAQTSKAPIQQFADKLSGYFVPFIVLVSIVTLLVWIIIGFQNFEIVEAYFPGYNRSISR 972

Query: 590  NGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKY 649
              T   FA   SI+V+ IACPC+LGLATPTAVMV TGVGA NG+LIKGG+ LE A K+K 
Sbjct: 973  TETIIRFAFQASITVLCIACPCSLGLATPTAVMVGTGVGAQNGILIKGGEPLEMAHKVKV 1032

Query: 650  VIFDKTGTLTQGRATVTTAKVF---TKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFH 706
            V+FDKTGT+T G   V   KV     K+ R + L +V +AE++SEHPL  AV +Y +   
Sbjct: 1033 VVFDKTGTITHGTPVVNQVKVLVESNKISRNKILAIVGTAESNSEHPLGAAVTKYCK--- 1089

Query: 707  FFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQ-------------- 752
                       Q    E+ G+      +DF  +PG GI C ++  +              
Sbjct: 1090 -----------QELDTETLGT-----CTDFQVVPGCGISCKVTNIEGLLHKSNLKIEENN 1133

Query: 753  --------------------------------------VLVGNRKLLNESGITIPDHVES 774
                                                  VL+GNR+ +  +G+ I + V+ 
Sbjct: 1134 IKNASLVQIDAINEQSSPSSSMIIDAHLSNAVNTQQYKVLIGNREWMIRNGLVISNDVDE 1193

Query: 775  FVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTA 834
             ++E E   RT +LV  DD L G++ IAD VK EA + V  L  MG+  V++TGDN +TA
Sbjct: 1194 SMIEHERRGRTAVLVTIDDELCGLIAIADTVKPEAELAVHILKSMGLEVVLMTGDNSKTA 1253

Query: 835  HAVAREV 841
             ++A +V
Sbjct: 1254 RSIASQV 1260

May supply copper to copper-requiring proteins within the secretory pathway, when localized in the trans-Golgi network. Under conditions of elevated extracellular copper, it relocalized to the plasma membrane where it functions in the efflux of copper from cells.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 4

>sp|Q9XT50|ATP7B_SHEEP Copper-transporting ATPase 2 OS=Ovis aries GN=ATP7B PE=2 SV=1

 Score =  473 bits (1218), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 321/897 (35%), Positives = 464/897 (51%), Gaps = 127/897 (14%)

Query: 48   IQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDA 107
            + + + GMTC +C  S+EG +    GV + SV L +  A V++DP     E+++ A+ED 
Sbjct: 402  MMLAIAGMTCKSCVQSIEGLISQRVGVHQISVFLAEGTAVVLYDPSRTHPEELRAAVEDM 461

Query: 108  GFEAEILAESSTS------------GPKPQGTIV----------GQYT------------ 133
            GFEA ILAE+ +S            GP+  G  V          G +T            
Sbjct: 462  GFEASILAENCSSNQVGNHSAGSAVGPEAAGAPVPMQGEAPQPGGLHTNHIPHQSPKSLL 521

Query: 134  -------------IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKD 180
                         I GMTCA+CV+++E  L+  PG+   +VAL     EV+Y+P  I   
Sbjct: 522  ASTTVAPKKCFLQISGMTCASCVSNIERNLQKEPGILSVLVALMAGKAEVKYNPEAIQPL 581

Query: 181  DIANAIEDAGFEASFVQS-SGQDKIL-LQVTGVLCELDAHFLEGILSNFKGVRQFRFDKI 238
            +IA  ++D GFEA+ ++  +G D  L L +TG+ C    H +E  L   +G+        
Sbjct: 582  EIAKLVQDLGFEAAVMEDYTGSDGDLELMITGMTCASCVHNIESKLRRTEGITYASVALA 641

Query: 239  SGELEVLFDPEALSSR---SLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNMFRLFI 295
            + +  V FDPE +  R    L++ I  R++     R+ N        + ++  N F   +
Sbjct: 642  TSKAHVKFDPEIIGPRDIVKLIEEIGFRAS--LAQRIPNAHHLDHKVEIKQWKNSF---L 696

Query: 296  SSLFLSIPV--FFIRVICPHIPLVYALLLWRCGPFL-MGDWLNWALVSVVQFVIGKRFYT 352
             SL   IPV    I ++ P      ++L     P L + + + + L + VQF+ G  FY 
Sbjct: 697  CSLVFGIPVMGLMIYMLIPSHEPQSSVLDHNVIPGLSILNLIFFILCTFVQFLGGWYFYV 756

Query: 353  AAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVV-TGFWSP-TYFETSAMLITFVLF 410
             A ++LR+G  NMDVL+ L TS AY YS+  L+  V      SP T+F+T  ML  F+  
Sbjct: 757  QAYKSLRHGMANMDVLIVLATSIAYVYSLVILVVAVAEKAERSPVTFFDTPPMLFVFIAL 816

Query: 411  GKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPG 470
            G++LE + K KTS+A+ +L+ L    A +V   +    I E ++   L+Q GD +KV+PG
Sbjct: 817  GRWLEHVVKSKTSEALARLMSLQATEATVVTLGEDNVIIREEQVPMELVQRGDIIKVVPG 876

Query: 471  TKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVL 530
             K P DG V+ G +  +ES++TGEA+PV K+  S VI G++N HG + I AT VG+D  L
Sbjct: 877  GKFPVDGKVLEGNTMADESLITGEAMPVTKKPGSMVIAGSMNAHGSVLITATHVGNDTTL 936

Query: 531  SQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVA-----GVLGAY--- 582
            +QI+ LVE AQMSKAPIQ+ AD  +  FVP ++ ++  T + W V      GV+  Y   
Sbjct: 937  AQIVKLVEEAQMSKAPIQQLADRFSGYFVPFIIIISTVTLVVWIVIGFIDFGVVQKYFPA 996

Query: 583  PEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALE 642
            P + + +      FA   SI+V+ IACPC+LGLATPTAVMV TGV A NG+LIKGG  LE
Sbjct: 997  PSKGISQAEVVLRFAFQTSITVLCIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLE 1056

Query: 643  RAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDR---GEFLTLVASAEASSEHPLAKAVV 699
             A KIK V+FDKTGT+T G   V+   +   +      + L +V +AEASSEHPL  AV 
Sbjct: 1057 MAHKIKTVMFDKTGTITHGVPKVSRVLLLVDLATLPLRKVLAVVGTAEASSEHPLGVAVT 1116

Query: 700  EYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQ------- 752
             Y                    KE  G+  L    DF A+PG GI C +S  +       
Sbjct: 1117 RYC-------------------KEELGTETLGCCMDFQAVPGCGISCKVSSVESILAQGE 1157

Query: 753  ----------------------------VLVGNRKLLNESGITIPDHVESFVVELEESAR 784
                                        VL+GNR+ +  +G+T+   V   + + E   +
Sbjct: 1158 RLQGPPTAHQNRVGSEPSETDAATQTFSVLIGNREWMRRNGLTVTSDVRDAMTDHETKGQ 1217

Query: 785  TGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREV 841
            T ILVA D  L G++ +AD VK+EAA+ V  L  MGV  V++TGDN +TA A+A +V
Sbjct: 1218 TAILVAIDGVLCGMIAVADSVKQEAALAVHTLKSMGVDVVLITGDNRKTARAIATQV 1274

Involved in the export of copper out of the cells, such as the efflux of hepatic copper into the bile.

Ovis aries (taxid: 9940)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 4

>sp|Q04656|ATP7A_HUMAN Copper-transporting ATPase 1 OS=Homo sapiens GN=ATP7A PE=1 SV=3

 Score =  473 bits (1216), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 320/912 (35%), Positives = 464/912 (50%), Gaps = 144/912 (15%)

Query: 50   VGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGF 109
            + + GMTC +C  S+EG +    GV    V+L  +   V +DP L   E ++ AIED GF
Sbjct: 381  INIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGF 440

Query: 110  EAE---------ILAESSTSGP------------------KPQGTIVGQYTIG--GMTCA 140
            +A          ++A+ S+  P                  K +G    +  I   GMTCA
Sbjct: 441  DATLSDTNEPLVVIAQPSSEMPLLTSTNEFYTKGMTPVQDKEEGKNSSKCYIQVTGMTCA 500

Query: 141  ACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSG 200
            +CV ++E  LR   G+   +VAL     EV Y+P VI    IA  I + GF A+ ++++ 
Sbjct: 501  SCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIENAD 560

Query: 201  Q-DKIL-LQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVD 258
            + D +L L V G+ C    H +E  L+  +G+        + +  + +DPE +  R ++ 
Sbjct: 561  EGDGVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIH 620

Query: 259  GIAGRSNGKFQIRVMNPFARMTSRDSE-ETSNMFRLFISSLFLSIPVF----FIRVICPH 313
             I       F+  ++      +  D + E     R F+ SLF  IPV     ++ V+  H
Sbjct: 621  TIESLG---FEASLVKKDRSASHLDHKREIRQWRRSFLVSLFFCIPVMGLMIYMMVMDHH 677

Query: 314  ---------------IPLVYALLLWRCGPFLMG----DWLNWALVSVVQFVIGKRFYTAA 354
                           I L  ++ L R    L G    + L++ L   VQF  G  FY  A
Sbjct: 678  FATLHHNQNMSKEEMINLHSSMFLER--QILPGLSVMNLLSFLLCVPVQFFGGWYFYIQA 735

Query: 355  GRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVT-GFWSP-TYFETSAMLITFVLFGK 412
             +AL++ + NMDVL+ L T+ A+ YS+  LL  +      +P T+F+T  ML  F+  G+
Sbjct: 736  YKALKHKTANMDVLIVLATTIAFAYSLIILLVAMYERAKVNPITFFDTPPMLFVFIALGR 795

Query: 413  YLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTK 472
            +LE +AKGKTS+A+ KL+ L    A +V  D     + E ++D  L+Q GD +KV+PG K
Sbjct: 796  WLEHIAKGKTSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGK 855

Query: 473  LPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQ 532
             P DG V+ G S V+ES++TGEA+PV K+  S VI G+IN +G L I AT VG+D  LSQ
Sbjct: 856  FPVDGRVIEGHSMVDESLITGEAMPVAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQ 915

Query: 533  IISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLG-AYPEQWLP--- 588
            I+ LVE AQ SKAPIQ+FAD ++  FVP +V +++ T L W V G L     E + P   
Sbjct: 916  IVKLVEEAQTSKAPIQQFADKLSGYFVPFIVFVSIATLLVWIVIGFLNFEIVETYFPGYN 975

Query: 589  ----ENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERA 644
                   T   FA   SI+V+ IACPC+LGLATPTAVMV TGVGA NG+LIKGG+ LE A
Sbjct: 976  RSISRTETIIRFAFQASITVLCIACPCSLGLATPTAVMVGTGVGAQNGILIKGGEPLEMA 1035

Query: 645  QKIKYVIFDKTGTLTQGRATVTTAKVFTKMDR---GEFLTLVASAEASSEHPLAKAVVEY 701
             K+K V+FDKTGT+T G   V   KV T+ +R    + L +V +AE++SEHPL  A+ +Y
Sbjct: 1036 HKVKVVVFDKTGTITHGTPVVNQVKVLTESNRISHHKILAIVGTAESNSEHPLGTAITKY 1095

Query: 702  ARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISG----------- 750
             +              Q    E+ G+       DF  +PG GI C ++            
Sbjct: 1096 CK--------------QELDTETLGTCI-----DFQVVPGCGISCKVTNIEGLLHKNNWN 1136

Query: 751  -----------------------------------------KQVLVGNRKLLNESGITIP 769
                                                      +VL+GNR+ +  +G+ I 
Sbjct: 1137 IEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGLVIN 1196

Query: 770  DHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGD 829
            + V  F+ E E   RT +LVA DD L G++ IAD VK EA + +  L  MG+  V++TGD
Sbjct: 1197 NDVNDFMTEHERKGRTAVLVAVDDELCGLIAIADTVKPEAELAIHILKSMGLEVVLMTGD 1256

Query: 830  NWRTAHAVAREV 841
            N +TA ++A +V
Sbjct: 1257 NSKTARSIASQV 1268

May supply copper to copper-requiring proteins within the secretory pathway, when localized in the trans-Golgi network. Under conditions of elevated extracellular copper, it relocalized to the plasma membrane where it functions in the efflux of copper from cells.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 4

>sp|Q64430|ATP7A_MOUSE Copper-transporting ATPase 1 OS=Mus musculus GN=Atp7a PE=1 SV=3

 Score =  469 bits (1207), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 312/902 (34%), Positives = 462/902 (51%), Gaps = 133/902 (14%)

Query: 50   VGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGF 109
            + + GMTC +C  S+EG +    GV    V+L  +   + FDP L   E ++ AIED GF
Sbjct: 381  ININGMTCNSCVQSIEGVISKKPGVKSIHVSLANSTGTIEFDPLLTSPETLREAIEDMGF 440

Query: 110  EAE---------ILAESSTSGPK-PQGTIVGQ----------YTIGGMTCAACVNSVEGI 149
            +A          ++A+ S   P  P    +              + GMTCA+CV ++E  
Sbjct: 441  DAALPDMKEPLVVIAQPSLETPLLPSSNELENVMTSVQNKCYIQVSGMTCASCVANIERN 500

Query: 150  LRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQ-- 207
            LR   G+   +VAL     EV Y+P VI    IA  I + GF A  ++++G+   +L+  
Sbjct: 501  LRREEGIYSVLVALMAGKAEVRYNPAVIQPRVIAEFIRELGFGAMVMENAGEGNGILELV 560

Query: 208  VTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGK 267
            V G+ C    H +E  L+  KG+        + +  + +DPE +  R ++  I       
Sbjct: 561  VRGMTCASCVHKIESTLTKHKGIFYCSVALATNKAHIKYDPEIIGPRDIIHTIGSLG--- 617

Query: 268  FQIRVMNPFARMTSRDSEETSNMFR-LFISSLFLSIPVF----FIRVICPHIPLVY---- 318
            F+  ++         D +     +R  F+ SLF  IPV     ++ V+  H+  ++    
Sbjct: 618  FEASLVKKDRSANHLDHKREIKQWRGSFLVSLFFCIPVMGLMVYMMVMDHHLATLHHNQN 677

Query: 319  -----------ALLLWR---CGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTN 364
                       A+ L R    G  +M + L+  L   VQF  G  FY  A +AL++ + N
Sbjct: 678  MSNEEMINMHSAMFLERQILPGLSIM-NLLSLLLCLPVQFCGGWYFYIQAYKALKHKTAN 736

Query: 365  MDVLVALGTSAAYFYSVGALLYGVVT-GFWSP-TYFETSAMLITFVLFGKYLEILAKGKT 422
            MDVL+ L T+ A+ YS+  LL  +      +P T+F+T  ML  F+  G++LE +AKGKT
Sbjct: 737  MDVLIVLATTIAFAYSLVILLVAMFERAKVNPITFFDTPPMLFVFIALGRWLEHIAKGKT 796

Query: 423  SDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWG 482
            S+A+ KL+ L    A +V  +     + E ++D  L+Q GD +KV+PG K P DG V+ G
Sbjct: 797  SEALAKLISLQATEATIVTLNSENLLLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEG 856

Query: 483  TSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQM 542
             S V+ES++TGEA+PV K+  S VI G+IN +G L I+AT VG+D  LSQI+ LVE AQ 
Sbjct: 857  HSMVDESLITGEAMPVAKKPGSTVIAGSINQNGSLLIRATHVGADTTLSQIVKLVEEAQT 916

Query: 543  SKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAG------VLGAYP--EQWLPENGTHF 594
            SKAPIQ+FAD ++  FVP +V +++ T L W + G      V   +P   + +    T  
Sbjct: 917  SKAPIQQFADKLSGYFVPFIVLVSIVTLLVWIIIGFQNFEIVETYFPGYNRSISRTETII 976

Query: 595  VFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDK 654
             FA   SI+V+ IACPC+LGLATPTAVMV TGVGA NG+LIKGG+ LE A K+K V+FDK
Sbjct: 977  RFAFQASITVLCIACPCSLGLATPTAVMVGTGVGAQNGILIKGGEPLEMAHKVKVVVFDK 1036

Query: 655  TGTLTQGRATVTTAKVF---TKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDP 711
            TGT+T G   V   KV     K+ R + L +V +AE++SEHPL  AV +Y +        
Sbjct: 1037 TGTITHGTPVVNQVKVLVESNKISRNKILAIVGTAESNSEHPLGAAVTKYCK-------- 1088

Query: 712  SLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQ------------------- 752
                  +    E+ G+      +DF  +PG GI C ++  +                   
Sbjct: 1089 ------KELDTETLGT-----CTDFQVVPGCGISCKVTNIEGLLHKSNLKIEENNIKNAS 1137

Query: 753  ---------------------------------VLVGNRKLLNESGITIPDHVESFVVEL 779
                                             VL+GNR+ +  +G+ I + V+  ++E 
Sbjct: 1138 LVQIDAINEQSSTSSSMIIDAHLSNAVNTQQYKVLIGNREWMIRNGLVISNDVDESMIEH 1197

Query: 780  EESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAR 839
            E   RT +LV  DD L G++ IAD VK EA + V  L  MG+  V++TGDN +TA ++A 
Sbjct: 1198 ERRGRTAVLVTIDDELCGLIAIADTVKPEAELAVHILKSMGLEVVLMTGDNSKTARSIAS 1257

Query: 840  EV 841
            +V
Sbjct: 1258 QV 1259

May supply copper to copper-requiring proteins within the secretory pathway, when localized in the trans-Golgi network. Under conditions of elevated extracellular copper, it relocalized to the plasma membrane where it functions in the efflux of copper from cells.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 4

>sp|Q64446|ATP7B_MOUSE Copper-transporting ATPase 2 OS=Mus musculus GN=Atp7b PE=1 SV=2

 Score =  468 bits (1204), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 318/887 (35%), Positives = 455/887 (51%), Gaps = 119/887 (13%)

Query: 52   VTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA 111
            ++G+TCA+    +E  L   KGV + S++L +    V++DP +V  ++++ A+ED GFE 
Sbjct: 367  ISGITCASSVQPIEDMLSQRKGVQQTSISLAEGTGAVLYDPSIVSLDELRTAVEDMGFEV 426

Query: 112  EILAE-----------SSTSGPKPQGTIVGQYT--------------------------- 133
             + +E           S  S P+  G I G                              
Sbjct: 427  SVNSETFTINPVRNFKSGNSVPQTMGDIAGSVQKMAPDTRGLPTHQGPGHSSETPSSPGA 486

Query: 134  ---------IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIAN 184
                     I GMTCA+CV+++E  L+   G+   +VAL +   EV+YDP +I    IA 
Sbjct: 487  TASQKCFVQIKGMTCASCVSNIERSLQRHAGILSVLVALMSGKAEVKYDPEIIQSPRIAQ 546

Query: 185  AIEDAGFEASFVQSS--GQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGEL 242
             I+D GFEAS ++ +   +  I L +TG+ C    H +E  L+   G+        + + 
Sbjct: 547  LIQDLGFEASVMEDNTVSEGDIELIITGMTCASCVHNIESKLTRTNGITYASVALATSKA 606

Query: 243  EVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNMFRLFISSLFLSI 302
             V FDPE +  R ++  I         +   NP A      +E      + F+ SL   I
Sbjct: 607  HVKFDPEIVGPRDIIK-IIEEIGFHASLAQRNPNAHHLDHKTE-IKQWKKSFLCSLVFGI 664

Query: 303  PVFFIRV---ICPHIPLVYALLLWRCGPFL-MGDWLNWALVSVVQFVIGKRFYTAAGRAL 358
            PV  + V   I    P    +L     P L + + + + L + VQF+ G  FY  A ++L
Sbjct: 665  PVMGLMVYMLIPSSTPQETMVLDHNIIPGLSVLNLIFFILCTFVQFLGGWYFYVQAYKSL 724

Query: 359  RNGSTNMDVLVALGTSAAYFYSVGALLYGVV-TGFWSP-TYFETSAMLITFVLFGKYLEI 416
            R+ S NMDVL+ L T+ AY YS+  L+  V      SP T+F+T  ML  F+  G++LE 
Sbjct: 725  RHRSANMDVLIVLATTIAYAYSLVILVVAVAEKAEKSPVTFFDTPPMLFVFIALGRWLEH 784

Query: 417  LAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPAD 476
            +AK KTS+A+ KL+ L    A +V   +    + E ++   L+Q GD +KV+PG K P D
Sbjct: 785  VAKSKTSEALAKLMSLQATEATVVTLGEDNLILREEQVPMELVQRGDVIKVVPGGKFPVD 844

Query: 477  GIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISL 536
            G V+ G +  +ES++TGEA+PV K+  S VI G+IN HG + ++AT VG+D  L+QI+ L
Sbjct: 845  GKVLEGNTMADESLITGEAMPVTKKPGSIVIAGSINAHGSVLLKATHVGNDTTLAQIVKL 904

Query: 537  VETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLG-AYPEQWLPENGTHFV 595
            VE AQMSKAPIQ+ AD  +  FVP ++ ++  T + W V G +     +++ P    H  
Sbjct: 905  VEEAQMSKAPIQQLADRFSGYFVPFIIIISTLTLVVWIVIGFVDFGVVQKYFPSPSKHIS 964

Query: 596  -------FALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIK 648
                   FA   SI+V+ IACPC+LGLATPTAVMV TGV A NGVLIKGG  LE A KIK
Sbjct: 965  QTEVIIRFAFQTSITVLCIACPCSLGLATPTAVMVGTGVAAQNGVLIKGGKPLEMAHKIK 1024

Query: 649  YVIFDKTGTLTQGRATVTT----AKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARH 704
             V+FDKTGT+T G   V      A V T   R + L +V +AEASSEHPL  AV +Y   
Sbjct: 1025 TVMFDKTGTITHGVPRVMRFLLLADVATLPLR-KVLAVVGTAEASSEHPLGVAVTKYC-- 1081

Query: 705  FHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFIS--------------- 749
                             KE  G+  L   +DF A+PG GI C +S               
Sbjct: 1082 -----------------KEELGTETLGYSTDFQAVPGCGISCKVSNVEGILARSDLTAHP 1124

Query: 750  ------------GKQ---VLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDN 794
                        G Q   VL+GNR+ +  +G+TI   +   + + E   +T ILVA D  
Sbjct: 1125 VGVGNPPTGEGAGPQTFSVLIGNREWMRRNGLTISSDISDAMTDHEMKGQTAILVAIDGV 1184

Query: 795  LIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREV 841
            L G++ IAD VK EAA+ +  L  MGV   ++TGDN +TA A+A +V
Sbjct: 1185 LCGMIAIADAVKPEAALAIYTLKSMGVDVALITGDNRKTARAIATQV 1231

Involved in the export of copper out of the cells, such as the efflux of hepatic copper into the bile.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 4

>sp|Q64535|ATP7B_RAT Copper-transporting ATPase 2 OS=Rattus norvegicus GN=Atp7b PE=2 SV=1

 Score =  457 bits (1176), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 311/883 (35%), Positives = 450/883 (50%), Gaps = 114/883 (12%)

Query: 52   VTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA 111
            +TG+   +    +E  L  +KGV +  ++L +    V++DP +V  ++++ A+ED GFE 
Sbjct: 361  ITGIPRDSSVQPMEDMLSQMKGVQQIDISLAEGTGAVLYDPSVVSSDELRTAVEDMGFEV 420

Query: 112  EILAES------------------------------------------STSGPKPQGTIV 129
             +  E+                                          S S P P GT  
Sbjct: 421  SVNPENITTNRVSSGNSVPQAVGDSPGSVQNMASDTRGLLTHQGPGYLSDSPPSPGGTAS 480

Query: 130  GQ--YTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIE 187
             +    I GMTCA+CV+++E  L+   G+   +VAL +   EV+YDP VI    IA  IE
Sbjct: 481  QKCFVQIKGMTCASCVSNIERSLQRHAGILSVLVALMSGKAEVKYDPEVIQSPRIAQLIE 540

Query: 188  DAGFEASFVQSS--GQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVL 245
            D GFEA+ ++ +   +  I L +TG+ C    H +E  L+   G+        + +  V 
Sbjct: 541  DLGFEAAIMEDNTVSEGDIELIITGMTCASCVHNIESKLTRTNGITYASVALATSKAHVK 600

Query: 246  FDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNMFRLFISSLFLSIPV- 304
            FDPE +  R ++  I         +   NP A      +E      + F+ SL   IPV 
Sbjct: 601  FDPEIIGPRDIIKVIE-EIGFHASLAHRNPNAHHLDHKTE-IKQWKKSFLCSLVFGIPVM 658

Query: 305  -FFIRVICPHI-PLVYALLLWRCGPFL-MGDWLNWALVSVVQFVIGKRFYTAAGRALRNG 361
               I ++ P   P    +L     P L + + + + L + VQF+ G  FY  A ++LR+ 
Sbjct: 659  GLMIYMLIPSSKPHETMVLDHNIIPGLSVLNLIFFILCTFVQFLGGWYFYVQAYKSLRHK 718

Query: 362  STNMDVLVALGTSAAYFYSVGALLYGVV-TGFWSP-TYFETSAMLITFVLFGKYLEILAK 419
            S NMDVL+ L T+ AY YS+  L+  +      SP T+F+T  ML  F+  G++LE +AK
Sbjct: 719  SANMDVLIVLATTIAYAYSLVILVVAIAEKAEKSPVTFFDTPPMLFVFIALGRWLEHVAK 778

Query: 420  GKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIV 479
             KTS+A+ KL+ L    A +V   +    + E ++   L+Q GD +KV+PG K P DG V
Sbjct: 779  SKTSEALAKLMSLQATEATVVTLGEDNLILREEQVPMELVQRGDIIKVVPGGKFPVDGKV 838

Query: 480  VWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVET 539
            + G +  +ES++TGEA+PV K+  S VI G+IN HG + I+AT VG+D  L+QI+ LVE 
Sbjct: 839  LEGNTMADESLITGEAMPVTKKPGSIVIAGSINAHGSVLIKATHVGNDTTLAQIVKLVEE 898

Query: 540  AQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLG-AYPEQWLPENGTHFV--- 595
            AQMSKAPIQ+ AD  +  FVP ++ ++  T + W + G +     +++ P    H     
Sbjct: 899  AQMSKAPIQQLADRFSGYFVPFIIIISTLTLVVWIIIGFVDFGIVQKYFPSPSKHISQTE 958

Query: 596  ----FALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVI 651
                FA   SI+V+ IACPC+LGLATPTAVMV TGV A NGVLIKGG  LE A KIK V+
Sbjct: 959  VIIRFAFQTSITVLCIACPCSLGLATPTAVMVGTGVAAQNGVLIKGGKPLEMAHKIKTVM 1018

Query: 652  FDKTGTLTQGRATVTTAKVF---TKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFF 708
            FDKTGT+T G   V    +      +   + L +V +AEASSEHPL  AV +Y       
Sbjct: 1019 FDKTGTITHGVPRVMRFLLLVDVATLSLRKVLAVVGTAEASSEHPLGVAVTKYC------ 1072

Query: 709  DDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFIS------------------- 749
                         KE  G+  L   +DF A+PG GI C +S                   
Sbjct: 1073 -------------KEELGTETLGYSTDFQAVPGCGISCKVSNVESILAHRGPTAHPIGVG 1119

Query: 750  --------GKQ---VLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGV 798
                    G Q   VL+GNR+ +  +G+TI   +   + + E   +T ILVA D  L G+
Sbjct: 1120 NPPIGEGTGPQTFSVLIGNREWMRRNGLTISSDISDAMTDHEMKGQTAILVAIDGVLCGM 1179

Query: 799  MGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREV 841
            + IAD VK EAA+    L  MGV   ++TGDN +TA A+A +V
Sbjct: 1180 IAIADAVKPEAALASITLKSMGVDVALITGDNRKTARAIATQV 1222

Involved in the export of copper out of the cells, such as the efflux of hepatic copper into the bile.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 4

>sp|Q4L970|COPA_STAHJ Copper-exporting P-type ATPase A OS=Staphylococcus haemolyticus (strain JCSC1435) GN=copA PE=3 SV=1

 Score =  457 bits (1176), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 276/719 (38%), Positives = 406/719 (56%), Gaps = 79/719 (10%)

Query: 134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
           I GMTCAAC N +E  L  +  VK A V L T    +EYD    + +D    ++  G++ 
Sbjct: 11  ITGMTCAACSNRIEKRLNKMDNVK-AQVNLTTEKATIEYDTNDYAINDFVTTVQKLGYDV 69

Query: 194 SFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSS 253
                   DK  L +TG+ C   ++ +E +L+   GV+    +  + +  V + P     
Sbjct: 70  VI------DKAELDITGMTCAACSNRIEKVLNKAPGVKDATVNLTTEQAMVTYYP----G 119

Query: 254 RSLVDGIAGR-SNGKFQIRVMNPFARMTSRDSEETSNMFRLFISSLFLSIPVF---FIRV 309
           ++ +D + GR  N  +  +         +R  +E  +     + S  LS+P+     + +
Sbjct: 120 QTDLDTLIGRIRNLGYDAQPKQSEEDQATRKQQELKHKRNKLMISTILSLPLLMTMLVHL 179

Query: 310 ICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLV 369
              H+P             LM  W  + L + +QF+IG +FY  A + LRNG  NMDVLV
Sbjct: 180 FNMHLP-----------DILMNPWFQFILATPIQFIIGWQFYVGAYKNLRNGGFNMDVLV 228

Query: 370 ALGTSAAYFYSVGALLYGVVTGFWSPT-----YFETSAMLITFVLFGKYLEILAKGKTSD 424
           ALGTSAAYFYS+    Y ++  F   T     YFETSA+LIT +LFGKYLE  AK +T++
Sbjct: 229 ALGTSAAYFYSI----YEMIKWFSGATNMPHLYFETSAVLITLILFGKYLEARAKSQTTN 284

Query: 425 AIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTS 484
           A+ +L+ L    A L+  + + K +   +++       D L + PG K+P DG ++ G +
Sbjct: 285 ALSELLNLQAKEARLIDDNGMEKMVPLNQVNV-----DDILLIKPGEKIPVDGQIIKGET 339

Query: 485 YVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSK 544
            ++ESM+TGE++PV K ++  VIG T+N +GV+ I ATKVG D  LS II +VE AQ SK
Sbjct: 340 AIDESMLTGESMPVDKHVDDVVIGSTMNTNGVITIMATKVGKDTALSNIIKVVEEAQSSK 399

Query: 545 APIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISV 604
           APIQ+ AD ++  FVPIV+ +AL T+L W    +   +P Q        F  AL+ +ISV
Sbjct: 400 APIQRLADIISGYFVPIVIAIALLTFLIW----ITLVHPGQ--------FEDALVAAISV 447

Query: 605 VVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRAT 664
           +VIACPCALGLATPT++MV TG  A NG+L KGG+ +ER  ++  V+FDKTGTLT G+  
Sbjct: 448 LVIACPCALGLATPTSIMVGTGRAAENGILFKGGEYVERTHQVDTVVFDKTGTLTHGKPE 507

Query: 665 VTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKES 724
           VT    + + D+ + LTLVASAE +SEHPLA A+V YA+  H  +               
Sbjct: 508 VT----YFEGDK-DTLTLVASAENNSEHPLATAIVNYAKQ-HKVN--------------- 546

Query: 725 TGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESAR 784
                L++V+++  LPG GIQ  I    + VGN+KL+ +  I I   ++  + ++E    
Sbjct: 547 -----LVNVTNYQTLPGHGIQAIIDDSMLFVGNQKLMLDHQINI-QSIKQKMKQMEAEGH 600

Query: 785 TGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCV 843
           T +L+AYD  L G++ +AD VK  A   ++ L  M +R VM+TGDN RTA A+A+EV +
Sbjct: 601 TVMLIAYDGKLRGMIAVADTVKASAKEAIQQLSSMNIRTVMLTGDNERTAKAIAKEVGI 659

Involved in copper export.

Staphylococcus haemolyticus (strain JCSC1435) (taxid: 279808)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: n

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	845
359472765	1000	PREDICTED: copper-transporting ATPase RA	0.996	0.842	0.786	0.0
224137820	1010	heavy metal ATPase [Populus trichocarpa]	0.990	0.828	0.780	0.0
297738009	952	unnamed protein product [Vitis vinifera]	0.945	0.839	0.812	0.0
224071055	1008	heavy metal ATPase [Populus trichocarpa]	0.992	0.832	0.772	0.0
307136407	1007	heavy metal ATPase [Cucumis melo subsp.	0.996	0.836	0.759	0.0
356558246	996	PREDICTED: copper-transporting ATPase RA	0.985	0.836	0.777	0.0
15241582	1001	copper-transporting ATPase RAN1 [Arabido	0.990	0.836	0.750	0.0
14194135	1001	AT5g44790/K23L20_14 [Arabidopsis thalian	0.990	0.836	0.750	0.0
449433505	1007	PREDICTED: copper-transporting ATPase RA	0.996	0.836	0.754	0.0
297791321	1004	responsive-to-antagonist1 [Arabidopsis l	0.990	0.833	0.747	0.0

>gi|359472765|ref|XP_002276004.2| PREDICTED: copper-transporting ATPase RAN1-like [Vitis vinifera] gi|147778109|emb|CAN69730.1| hypothetical protein VITISV_011925 [Vitis vinifera]

 Score = 1353 bits (3501), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 668/849 (78%), Positives = 741/849 (87%), Gaps = 7/849 (0%)

Query: 2   MALSNRDLQLTELNGGG-----SSDGDDREDEWLLNNYDGKKERIGDGMRRIQVGVTGMT 56
           MA S   LQLT  + GG       D  D ED  LL+ Y      + +GMR IQV VTGMT
Sbjct: 1   MAPSFGGLQLTPFSSGGRKTLPDDDAGDLEDVRLLDAYKEDDSGLEEGMRGIQVRVTGMT 60

Query: 57  CAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAE 116
           CAACSNSVEGAL  + GV +ASVALLQN+ADVVFDP LV +EDIKNAIEDAGF+AEI++E
Sbjct: 61  CAACSNSVEGALRDVNGVLRASVALLQNRADVVFDPKLVGEEDIKNAIEDAGFDAEIMSE 120

Query: 117 SSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTV 176
            S +  KP GT++GQ+TIGGMTCA CVNSVEGILR LPGVKRAVVALATSLGEVEYDPT+
Sbjct: 121 PSRT--KPHGTLLGQFTIGGMTCAVCVNSVEGILRKLPGVKRAVVALATSLGEVEYDPTI 178

Query: 177 ISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFD 236
           ISKDDI NAIEDAGFEASFVQSS QDKI+L VTG+  E+DA  LEGIL++ +GVRQF FD
Sbjct: 179 ISKDDIVNAIEDAGFEASFVQSSEQDKIILGVTGISNEMDALILEGILTSIRGVRQFLFD 238

Query: 237 KISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNMFRLFIS 296
           +  GELEVLFDPE +SSRSLVDGI G SN KF++ V NP+ RMTS+D EE+SNMFRLF S
Sbjct: 239 RTLGELEVLFDPEVISSRSLVDGIEGGSNAKFKLHVKNPYTRMTSKDLEESSNMFRLFTS 298

Query: 297 SLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGR 356
           SLFLSIPVF IRV+CPHIPLV +LLL RCGPFLMGDWL WALVS+VQFVIGKRFY AAGR
Sbjct: 299 SLFLSIPVFLIRVVCPHIPLVDSLLLLRCGPFLMGDWLKWALVSLVQFVIGKRFYIAAGR 358

Query: 357 ALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEI 416
           ALRNGS NMDVLVALGTSA+YFYSV ALLYG VTGFWSPTYFE SAMLITFVL GKYLE 
Sbjct: 359 ALRNGSANMDVLVALGTSASYFYSVCALLYGAVTGFWSPTYFEASAMLITFVLLGKYLES 418

Query: 417 LAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPAD 476
           LAKGKTSDAIKKLVELAPATALL+VKDK G+ IEE+EIDA+LIQ GD LKVLPGTK+PAD
Sbjct: 419 LAKGKTSDAIKKLVELAPATALLLVKDKGGRFIEEQEIDAMLIQPGDVLKVLPGTKVPAD 478

Query: 477 GIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISL 536
           GIV+WG+SYVNESMVTGE+ PV KE+NSPVIGGT+NL+G LHIQATKVGS+AVLSQIISL
Sbjct: 479 GIVMWGSSYVNESMVTGESAPVSKEVNSPVIGGTMNLYGALHIQATKVGSNAVLSQIISL 538

Query: 537 VETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVF 596
           VETAQMSKAPIQKFADFVASIFVP VV ++L T L WYV+G LGAYP+QWLPENG +FVF
Sbjct: 539 VETAQMSKAPIQKFADFVASIFVPTVVAMSLLTLLGWYVSGTLGAYPKQWLPENGNYFVF 598

Query: 597 ALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTG 656
           ALMF+ISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQK+KYV+FDKTG
Sbjct: 599 ALMFAISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKVKYVVFDKTG 658

Query: 657 TLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPD 716
           TLTQG+ATVTTAKVFT MD GEFLTLVASAEASSEHPLA A+VEYARHFHFF++PS   D
Sbjct: 659 TLTQGKATVTTAKVFTGMDHGEFLTLVASAEASSEHPLAVAIVEYARHFHFFEEPSTTKD 718

Query: 717 GQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFV 776
            Q HS+E+  SGWLLDVS+FSALPGRG+QCFI GK+VLVGNRKLL ESG+TIP  VE+F+
Sbjct: 719 AQDHSRETRFSGWLLDVSEFSALPGRGVQCFIKGKRVLVGNRKLLTESGVTIPTDVENFL 778

Query: 777 VELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHA 836
           V LEESA+TG+LVAYDD  +GV+G+ADP+KREAAVVVEGLLKMGV PVMVTGDNWRTA A
Sbjct: 779 VNLEESAKTGVLVAYDDTAVGVLGVADPLKREAAVVVEGLLKMGVIPVMVTGDNWRTARA 838

Query: 837 VAREVCVID 845
           VA+EV + D
Sbjct: 839 VAKEVGIQD 847

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137820|ref|XP_002326448.1| heavy metal ATPase [Populus trichocarpa] gi|222833770|gb|EEE72247.1| heavy metal ATPase [Populus trichocarpa]

 Score = 1350 bits (3494), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 670/858 (78%), Positives = 745/858 (86%), Gaps = 21/858 (2%)

Query: 7   RDLQLTELNG----------GGSSDGDD-REDEWLLNNYDG-----KKERI---GDGMRR 47
           RDLQLT+  G           G  D DD +ED  LL++Y+         RI    DG +R
Sbjct: 2   RDLQLTQAAGTRKSPPAMISAGEEDADDMKEDVRLLDSYESLGDNDNSHRIVIEEDGFKR 61

Query: 48  IQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDA 107
           IQV VTGMTCAACSNSVE AL  + GV +ASVALLQNKADVVFDP LVKD+DIKNAIEDA
Sbjct: 62  IQVRVTGMTCAACSNSVESALKSVDGVFRASVALLQNKADVVFDPALVKDDDIKNAIEDA 121

Query: 108 GFEAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSL 167
           GFEAEIL+E      KP GT++GQ+TIGGMTCAACVNSVEGILR LPGVKRAVVALATSL
Sbjct: 122 GFEAEILSEPIKLKTKPNGTLLGQFTIGGMTCAACVNSVEGILRDLPGVKRAVVALATSL 181

Query: 168 GEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNF 227
           GEVEYDP VISKDDI NAIEDAGF+AS VQSS  DKI+L V G+  E+D   LEGILS  
Sbjct: 182 GEVEYDPIVISKDDIVNAIEDAGFDASLVQSSQHDKIVLGVAGIFSEVDVQLLEGILSML 241

Query: 228 KGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEET 287
           KGVRQFR+  IS ELEVLFDPE L SRSLVDG+ G SNGKF++  +NP++RMTS+D  ET
Sbjct: 242 KGVRQFRYHWISSELEVLFDPEVLGSRSLVDGVEGGSNGKFKLHPINPYSRMTSKDVGET 301

Query: 288 SNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIG 347
           S MFRLF+SSLFLSIP+FF+RVICP++PL+ +LLLWRCGPFLMGDWL WALVSVVQFVIG
Sbjct: 302 SVMFRLFLSSLFLSIPIFFMRVICPYVPLLSSLLLWRCGPFLMGDWLKWALVSVVQFVIG 361

Query: 348 KRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITF 407
           KRFY AAGRALRNGSTNMDVLVALGTSA+YFYSV ALLYG VTGFWSPTYFETS+MLITF
Sbjct: 362 KRFYVAAGRALRNGSTNMDVLVALGTSASYFYSVCALLYGAVTGFWSPTYFETSSMLITF 421

Query: 408 VLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKV 467
           VL GKYLE LAKGKTSDAIKKLVELAPATALLVVKDK G+CI EREID+LLIQ  DTLKV
Sbjct: 422 VLLGKYLECLAKGKTSDAIKKLVELAPATALLVVKDKGGRCIGEREIDSLLIQPSDTLKV 481

Query: 468 LPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSD 527
           LPGTK+PADG+VVWG+SY+NESMVTGE+VPVLKE++S VIGGT+NLHG LHI+ATKVGSD
Sbjct: 482 LPGTKVPADGVVVWGSSYINESMVTGESVPVLKEVSSSVIGGTMNLHGALHIKATKVGSD 541

Query: 528 AVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWL 587
           AVLSQIISLVETAQMSKAPIQKFAD+VASIFVPIVV L+L T+  WY++G+LGAYPE+WL
Sbjct: 542 AVLSQIISLVETAQMSKAPIQKFADYVASIFVPIVVGLSLVTFFSWYISGILGAYPEEWL 601

Query: 588 PENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKI 647
           PENGT+FVF+LMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGG+ALERAQKI
Sbjct: 602 PENGTYFVFSLMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGEALERAQKI 661

Query: 648 KYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHF 707
           KYVIFDKTGTLTQG+A+VT AKVFT M RGEFL  VASAEASSEHPLAKA+VEYARHFHF
Sbjct: 662 KYVIFDKTGTLTQGKASVTDAKVFTGMGRGEFLRWVASAEASSEHPLAKAIVEYARHFHF 721

Query: 708 FDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGIT 767
           FD+PS     Q+ S+EST SGWLLDVSDF ALPGRG++CF+ GKQVLVGNRKL+ ESGI 
Sbjct: 722 FDEPSAT--SQTPSRESTISGWLLDVSDFLALPGRGVKCFVDGKQVLVGNRKLMTESGIA 779

Query: 768 IPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVT 827
           IPD VE FVVELEESA+TG+LVA+DD +IGV+GIADP+KREAAVV+EGLLKMGV+PVMVT
Sbjct: 780 IPDQVEHFVVELEESAKTGVLVAFDDKIIGVLGIADPLKREAAVVIEGLLKMGVKPVMVT 839

Query: 828 GDNWRTAHAVAREVCVID 845
           GDNWRTA AVA+EV + D
Sbjct: 840 GDNWRTARAVAKEVGIQD 857

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738009|emb|CBI27210.3| unnamed protein product [Vitis vinifera]

 Score = 1335 bits (3454), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 651/801 (81%), Positives = 720/801 (89%), Gaps = 2/801 (0%)

Query: 45  MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAI 104
           MR IQV VTGMTCAACSNSVEGAL  + GV +ASVALLQN+ADVVFDP LV +EDIKNAI
Sbjct: 1   MRGIQVRVTGMTCAACSNSVEGALRDVNGVLRASVALLQNRADVVFDPKLVGEEDIKNAI 60

Query: 105 EDAGFEAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALA 164
           EDAGF+AEI++E S +  KP GT++GQ+TIGGMTCA CVNSVEGILR LPGVKRAVVALA
Sbjct: 61  EDAGFDAEIMSEPSRT--KPHGTLLGQFTIGGMTCAVCVNSVEGILRKLPGVKRAVVALA 118

Query: 165 TSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGIL 224
           TSLGEVEYDPT+ISKDDI NAIEDAGFEASFVQSS QDKI+L VTG+  E+DA  LEGIL
Sbjct: 119 TSLGEVEYDPTIISKDDIVNAIEDAGFEASFVQSSEQDKIILGVTGISNEMDALILEGIL 178

Query: 225 SNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDS 284
           ++ +GVRQF FD+  GELEVLFDPE +SSRSLVDGI G SN KF++ V NP+ RMTS+D 
Sbjct: 179 TSIRGVRQFLFDRTLGELEVLFDPEVISSRSLVDGIEGGSNAKFKLHVKNPYTRMTSKDL 238

Query: 285 EETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQF 344
           EE+SNMFRLF SSLFLSIPVF IRV+CPHIPLV +LLL RCGPFLMGDWL WALVS+VQF
Sbjct: 239 EESSNMFRLFTSSLFLSIPVFLIRVVCPHIPLVDSLLLLRCGPFLMGDWLKWALVSLVQF 298

Query: 345 VIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAML 404
           VIGKRFY AAGRALRNGS NMDVLVALGTSA+YFYSV ALLYG VTGFWSPTYFE SAML
Sbjct: 299 VIGKRFYIAAGRALRNGSANMDVLVALGTSASYFYSVCALLYGAVTGFWSPTYFEASAML 358

Query: 405 ITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDT 464
           ITFVL GKYLE LAKGKTSDAIKKLVELAPATALL+VKDK G+ IEE+EIDA+LIQ GD 
Sbjct: 359 ITFVLLGKYLESLAKGKTSDAIKKLVELAPATALLLVKDKGGRFIEEQEIDAMLIQPGDV 418

Query: 465 LKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKV 524
           LKVLPGTK+PADGIV+WG+SYVNESMVTGE+ PV KE+NSPVIGGT+NL+G LHIQATKV
Sbjct: 419 LKVLPGTKVPADGIVMWGSSYVNESMVTGESAPVSKEVNSPVIGGTMNLYGALHIQATKV 478

Query: 525 GSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPE 584
           GS+AVLSQIISLVETAQMSKAPIQKFADFVASIFVP VV ++L T L WYV+G LGAYP+
Sbjct: 479 GSNAVLSQIISLVETAQMSKAPIQKFADFVASIFVPTVVAMSLLTLLGWYVSGTLGAYPK 538

Query: 585 QWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERA 644
           QWLPENG +FVFALMF+ISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERA
Sbjct: 539 QWLPENGNYFVFALMFAISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERA 598

Query: 645 QKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARH 704
           QK+KYV+FDKTGTLTQG+ATVTTAKVFT MD GEFLTLVASAEASSEHPLA A+VEYARH
Sbjct: 599 QKVKYVVFDKTGTLTQGKATVTTAKVFTGMDHGEFLTLVASAEASSEHPLAVAIVEYARH 658

Query: 705 FHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNES 764
           FHFF++PS   D Q HS+E+  SGWLLDVS+FSALPGRG+QCFI GK+VLVGNRKLL ES
Sbjct: 659 FHFFEEPSTTKDAQDHSRETRFSGWLLDVSEFSALPGRGVQCFIKGKRVLVGNRKLLTES 718

Query: 765 GITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPV 824
           G+TIP  VE+F+V LEESA+TG+LVAYDD  +GV+G+ADP+KREAAVVVEGLLKMGV PV
Sbjct: 719 GVTIPTDVENFLVNLEESAKTGVLVAYDDTAVGVLGVADPLKREAAVVVEGLLKMGVIPV 778

Query: 825 MVTGDNWRTAHAVAREVCVID 845
           MVTGDNWRTA AVA+EV + D
Sbjct: 779 MVTGDNWRTARAVAKEVGIQD 799

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224071055|ref|XP_002303349.1| heavy metal ATPase [Populus trichocarpa] gi|222840781|gb|EEE78328.1| heavy metal ATPase [Populus trichocarpa]

 Score = 1325 bits (3430), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 660/854 (77%), Positives = 735/854 (86%), Gaps = 15/854 (1%)

Query: 7   RDLQLTELNGGGSS------DGDDREDEWLLNNYDGKKER--------IGD-GMRRIQVG 51
           RDLQLT++ G   S        D  ED  LL++ + + +         IG+ G +RIQV 
Sbjct: 2   RDLQLTQVAGTRQSPLAMVYTDDMMEDVRLLDSCESRDDHNDGSHAIVIGEVGSKRIQVR 61

Query: 52  VTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA 111
           VTGMTCAACSNSVE AL  + GV +ASVALLQNKADVVFDP LVKD+DIKNAIEDAGFEA
Sbjct: 62  VTGMTCAACSNSVESALKSVHGVFRASVALLQNKADVVFDPALVKDDDIKNAIEDAGFEA 121

Query: 112 EILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVE 171
           EIL+E S    KP GT++GQ+TIGGMTCAACVNSVEGILR  PGVKRAVVALATSLGEVE
Sbjct: 122 EILSEPSILKTKPNGTLLGQFTIGGMTCAACVNSVEGILRNRPGVKRAVVALATSLGEVE 181

Query: 172 YDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVR 231
           YDPTVISKDDI NAIEDAGF+AS VQSS QDKILL V G+  E+D   LEGIL   KGVR
Sbjct: 182 YDPTVISKDDIVNAIEDAGFDASLVQSSQQDKILLGVAGIFSEMDVQLLEGILIMLKGVR 241

Query: 232 QFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNMF 291
           QFR++++S ELEVLFDPE + SRSLVDG+ G SNGKF++ V+NP++RMTS+D  E S MF
Sbjct: 242 QFRYNQLSSELEVLFDPEVVGSRSLVDGVEGGSNGKFKLHVINPYSRMTSKDVGEISVMF 301

Query: 292 RLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFY 351
           RLFISSLFLSIP+FF+RVICPHIPL+Y+LLLWRCGPFLMGDWL WALVSVVQFVIGKRFY
Sbjct: 302 RLFISSLFLSIPIFFMRVICPHIPLLYSLLLWRCGPFLMGDWLKWALVSVVQFVIGKRFY 361

Query: 352 TAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFG 411
            AAGRALRNGSTNMDVLVALGTSA+YFYSV ALLYG VTG WSPTYFETS+MLITFVL G
Sbjct: 362 VAAGRALRNGSTNMDVLVALGTSASYFYSVCALLYGAVTGLWSPTYFETSSMLITFVLLG 421

Query: 412 KYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGT 471
           KYLE LAKGKTSDAIKKLV+LAPATALLVVKDK GK I EREID+LLIQ GD LKV PGT
Sbjct: 422 KYLECLAKGKTSDAIKKLVQLAPATALLVVKDKGGKSIGEREIDSLLIQPGDILKVPPGT 481

Query: 472 KLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLS 531
           K+PADG+VV G+S+VNESMVTGE+ PVLKE +S VIGGTINLHG LHIQATKVGSDAVLS
Sbjct: 482 KVPADGVVVRGSSHVNESMVTGESAPVLKEASSSVIGGTINLHGALHIQATKVGSDAVLS 541

Query: 532 QIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENG 591
           QIISLVETAQMSKAPIQKFAD+VASIFVP VV LAL T   WY++G+ GAYPE+WLPENG
Sbjct: 542 QIISLVETAQMSKAPIQKFADYVASIFVPTVVGLALVTLFSWYISGISGAYPEEWLPENG 601

Query: 592 THFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVI 651
            +FVF+LMFSISVVVIACPCALGLATPTAVMVATGVGAN+GVLIKGGDALERAQKIKYVI
Sbjct: 602 NYFVFSLMFSISVVVIACPCALGLATPTAVMVATGVGANHGVLIKGGDALERAQKIKYVI 661

Query: 652 FDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDP 711
            DKTGTLTQG+ATVT  KVFT M RGEFL  VASAEASSEHPLAKA+VE+ARHFH FD+P
Sbjct: 662 LDKTGTLTQGKATVTDVKVFTGMGRGEFLRWVASAEASSEHPLAKAIVEHARHFHSFDEP 721

Query: 712 SLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDH 771
               DGQ+ SK ST SGWLLDVSDF A PG G++CFI GK++LVGNRKL+ ESGI IPD 
Sbjct: 722 PATNDGQTPSKGSTISGWLLDVSDFLAHPGSGVKCFIDGKRILVGNRKLMTESGIAIPDQ 781

Query: 772 VESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNW 831
           VE+FVVELEESA+TG+LVA+DDN+IG++GIADP+KREAAVV+EGLLKMGV+PVMVTGDNW
Sbjct: 782 VENFVVELEESAKTGVLVAFDDNIIGILGIADPLKREAAVVIEGLLKMGVKPVMVTGDNW 841

Query: 832 RTAHAVAREVCVID 845
           RTA AVA+EV + D
Sbjct: 842 RTARAVAKEVGIQD 855

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307136407|gb|ADN34216.1| heavy metal ATPase [Cucumis melo subsp. melo]

 Score = 1324 bits (3426), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 650/856 (75%), Positives = 741/856 (86%), Gaps = 14/856 (1%)

Query: 2   MALSNRDLQLTELNGG-------GSSD--GDDREDEWLLNNYDGKKE---RIGDGMRRIQ 49
           MA   RDLQL  +           ++D   DD ED  LL++Y+  +E   +IGDGM+R+Q
Sbjct: 1   MAPGLRDLQLAHVAAADRRLPDISAADEIPDDLEDVRLLDSYERHEENFGQIGDGMKRVQ 60

Query: 50  VGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGF 109
           V V+GMTCAACSNSVE AL G+ GV  ASVALLQN+ADVVFDP LVK++DIK AIEDAGF
Sbjct: 61  VTVSGMTCAACSNSVEAALRGVNGVLMASVALLQNRADVVFDPSLVKEKDIKEAIEDAGF 120

Query: 110 EAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGE 169
           EAEI+ E+++ G K  GT+VGQ+TIGGMTCAACVNSVEGIL+ LPGV+RAVVALATSLGE
Sbjct: 121 EAEIIPETTSVGKKLHGTLVGQFTIGGMTCAACVNSVEGILKDLPGVRRAVVALATSLGE 180

Query: 170 VEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKG 229
           VEYDPT+ SKDDI NAIEDAGFEASFVQSS QDKILL V G+  E+D  FLE ILSN KG
Sbjct: 181 VEYDPTITSKDDIVNAIEDAGFEASFVQSSEQDKILLTVAGIAGEVDVQFLEAILSNLKG 240

Query: 230 VRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSN 289
           V++F FD  SG+LE++FDPE +  RSLVD I GRSN KF++ V +P+ R+TS+D EE +N
Sbjct: 241 VKRFLFDSTSGKLEIIFDPEVVGPRSLVDEIEGRSNRKFKLHVTSPYTRLTSKDVEEANN 300

Query: 290 MFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKR 349
           MFRLFISSLFLS+ +F  RVICPHIPL+Y+LLLWRCGPFLM DWL WALV+VVQFVIGKR
Sbjct: 301 MFRLFISSLFLSVLIFLQRVICPHIPLIYSLLLWRCGPFLMDDWLKWALVTVVQFVIGKR 360

Query: 350 FYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVL 409
           FY AA RALRNGSTNMDVLVALGT+A+Y YSV ALLYG VTGFWSPTYFETSAMLITFVL
Sbjct: 361 FYVAAARALRNGSTNMDVLVALGTTASYVYSVCALLYGAVTGFWSPTYFETSAMLITFVL 420

Query: 410 FGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLP 469
            GKYLE LAKGKTSDAIKKLVELAPATALL+++DK G  IEEREIDALLIQ GD LKVLP
Sbjct: 421 LGKYLECLAKGKTSDAIKKLVELAPATALLLIRDKGGNLIEEREIDALLIQPGDVLKVLP 480

Query: 470 GTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAV 529
           GTK+PADG+VVWG+SYVNESMVTGE++PVLKE++S VIGGTIN HG LHIQATKVGSDAV
Sbjct: 481 GTKIPADGVVVWGSSYVNESMVTGESIPVLKEVSSNVIGGTINFHGALHIQATKVGSDAV 540

Query: 530 LSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPE 589
           L+QIISLVETAQMSKAPIQKFADFVASIFVP VV +AL T   WYV G+LGAYP +WLPE
Sbjct: 541 LNQIISLVETAQMSKAPIQKFADFVASIFVPTVVAMALCTLFGWYVGGILGAYPAKWLPE 600

Query: 590 NGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKY 649
           NG +FVF+LMF+I+VVVIACPCALGLATPTAVMVATGVGA+NGVLIKGGDALERAQK+KY
Sbjct: 601 NGNYFVFSLMFAIAVVVIACPCALGLATPTAVMVATGVGASNGVLIKGGDALERAQKVKY 660

Query: 650 VIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFD 709
           VIFDKTGTLTQG+ATVTTAKVFT++ RG+FL LVASAEASSEHPL KA+VEYARHFHFFD
Sbjct: 661 VIFDKTGTLTQGKATVTTAKVFTEISRGDFLKLVASAEASSEHPLGKAMVEYARHFHFFD 720

Query: 710 DPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIP 769
           +PS   + ++ SKES  SGWL DV+DFSALPG+GIQC I GK++LVGNRKL+NESGI+I 
Sbjct: 721 EPSATKNVENQSKES--SGWLFDVTDFSALPGQGIQCIIEGKRILVGNRKLMNESGISIA 778

Query: 770 DHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGD 829
            HV++FV+ELEESA+TGILVA DDNLIGV+GIADP+KREAAVVVEGL+KMGV PVMVTGD
Sbjct: 779 PHVDNFVIELEESAKTGILVACDDNLIGVVGIADPLKREAAVVVEGLVKMGVSPVMVTGD 838

Query: 830 NWRTAHAVAREVCVID 845
           NWRTA AVA+E+ + D
Sbjct: 839 NWRTARAVAKELGIQD 854

Source: Cucumis melo subsp. melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356558246|ref|XP_003547418.1| PREDICTED: copper-transporting ATPase RAN1-like [Glycine max]

 Score = 1323 bits (3425), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 653/840 (77%), Positives = 726/840 (86%), Gaps = 7/840 (0%)

Query: 9   LQLTELNGG---GSSDGDDREDEWLLNNYDGKKERIGDGMRRIQVGVTGMTCAACSNSVE 65
           LQLT L G     ++D D+ ED  LL++YD     I  G RRIQV VTGMTCAACSNSVE
Sbjct: 8   LQLTSLAGDRRTAAADSDELEDMRLLDSYD----EINGGARRIQVEVTGMTCAACSNSVE 63

Query: 66  GALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGPKPQ 125
            AL  L GV  ASVALLQNKADVVF+  L+KDEDIKNAIEDAGFEA+IL ESST G  PQ
Sbjct: 64  SALKSLDGVISASVALLQNKADVVFNTALLKDEDIKNAIEDAGFEADILPESSTVGKVPQ 123

Query: 126 GTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANA 185
           GT+VGQ+TIGGMTCAACVNSVEGILR LPGV+RAVVALATS GEVEYDP+VISKDDI NA
Sbjct: 124 GTLVGQFTIGGMTCAACVNSVEGILRNLPGVRRAVVALATSSGEVEYDPSVISKDDIVNA 183

Query: 186 IEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVL 245
           IED+GF+ SF+QS+ QDKI+L+V GV   +DA  LEGILS+ KGVRQF FD++SGEL+VL
Sbjct: 184 IEDSGFDGSFIQSNEQDKIILRVVGVYSLIDAQVLEGILSSTKGVRQFHFDQVSGELDVL 243

Query: 246 FDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNMFRLFISSLFLSIPVF 305
           FDPE LSSRS+VD I   SNGKF++ V +P+ RM S+D  ETS +FRLFISSLFLSIP+F
Sbjct: 244 FDPEVLSSRSVVDAIQEGSNGKFKLHVRSPYTRMASKDVAETSTIFRLFISSLFLSIPLF 303

Query: 306 FIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNM 365
           F+RV+CPHIPL Y+LLLWRCGPFLMGDWL WALVSV+QFVIGKRFY AA RALRNGSTNM
Sbjct: 304 FMRVVCPHIPLFYSLLLWRCGPFLMGDWLKWALVSVIQFVIGKRFYIAASRALRNGSTNM 363

Query: 366 DVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDA 425
           DVLVA+GT+A+Y YSV ALLYG +TGFWSPTYFETSAMLITFVL GKYLE LAKGKTSDA
Sbjct: 364 DVLVAVGTTASYVYSVCALLYGALTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDA 423

Query: 426 IKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSY 485
           IKKLVEL PATALLVVKDK GK IE REID+LLIQ GDTLKVLPG K+PADGIV WG+SY
Sbjct: 424 IKKLVELTPATALLVVKDKGGKSIEVREIDSLLIQPGDTLKVLPGAKIPADGIVTWGSSY 483

Query: 486 VNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKA 545
           VNESMVTGE+VP++KE+N+ VIGGTINLHGVLHIQATKVGSD VLSQIISLVETAQMSKA
Sbjct: 484 VNESMVTGESVPIMKEVNASVIGGTINLHGVLHIQATKVGSDTVLSQIISLVETAQMSKA 543

Query: 546 PIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVV 605
           PIQKFAD+VASIFVP VV+LAL T L WYVAG +GAYPE+WLPENG HFVFALMFSISVV
Sbjct: 544 PIQKFADYVASIFVPSVVSLALLTLLGWYVAGSIGAYPEEWLPENGNHFVFALMFSISVV 603

Query: 606 VIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATV 665
           VIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQ++KYVIFDKTGTLTQG+ATV
Sbjct: 604 VIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQRVKYVIFDKTGTLTQGKATV 663

Query: 666 TTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKEST 725
           T AK FT M+RGEFL LVASAEASSEHPLAKA++ YARHFHFFDD S     +  ++   
Sbjct: 664 TAAKTFTGMERGEFLKLVASAEASSEHPLAKAILAYARHFHFFDDSSDTTGTEIDAENDA 723

Query: 726 GSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESART 785
            SGWL DVSDFSALPG G+QCFI GK +LVGNRKL+ E+GI I   VE+FVVELEESA+T
Sbjct: 724 KSGWLFDVSDFSALPGIGVQCFIDGKLILVGNRKLMEENGIDISTEVENFVVELEESAKT 783

Query: 786 GILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVID 845
           GILVAY+D L GV+GIADP+KREA+VV+EGL KMGV PVMVTGDNWRTA AVA+EV + D
Sbjct: 784 GILVAYNDILTGVLGIADPLKREASVVIEGLQKMGVTPVMVTGDNWRTARAVAKEVGIQD 843

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15241582|ref|NP_199292.1| copper-transporting ATPase RAN1 [Arabidopsis thaliana] gi|12229667|sp|Q9S7J8.1|HMA7_ARATH RecName: Full=Copper-transporting ATPase RAN1; AltName: Full=Protein HEAVY METAL ATPASE 7; AltName: Full=Protein RESPONSIVE TO ANTAGONIST 1 gi|4760370|gb|AAD29109.1|AF082565_1 ATP dependent copper transporter [Arabidopsis thaliana] gi|4760380|gb|AAD29115.1| ATP dependent copper transporter [Arabidopsis thaliana] gi|6850337|gb|AAC79141.2| ATP dependent copper transporter (RAN1) [Arabidopsis thaliana] gi|9758383|dbj|BAB08832.1| ATP dependent copper transporter [Arabidopsis thaliana] gi|332007780|gb|AED95163.1| copper-transporting ATPase RAN1 [Arabidopsis thaliana]

 Score = 1317 bits (3409), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/855 (75%), Positives = 737/855 (86%), Gaps = 18/855 (2%)

Query: 2   MALSNRDLQLTELNGGGSSDGDDREDEWLLNNYDGKKE-----------RIGDGMRRIQV 50
           MA S RDLQLT + GG SS   D E+  LL++Y  +             R   G+R+IQV
Sbjct: 1   MAPSRRDLQLTPVTGGSSSQISDMEEVGLLDSYHNEANADDILTKIEEGRDVSGLRKIQV 60

Query: 51  GVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFE 110
           GVTGMTCAACSNSVE ALM + GV KASVALLQN+ADVVFDP+LVK+EDIK AIEDAGFE
Sbjct: 61  GVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEAIEDAGFE 120

Query: 111 AEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEV 170
           AEILAE  T     Q T+VGQ+TIGGMTCAACVNSVEGILR LPGVKRAVVAL+TSLGEV
Sbjct: 121 AEILAEEQT-----QATLVGQFTIGGMTCAACVNSVEGILRDLPGVKRAVVALSTSLGEV 175

Query: 171 EYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGV 230
           EYDP VI+KDDI NAIEDAGFE S VQS+ QDK++L+V G+L ELDA  LEGIL+   GV
Sbjct: 176 EYDPNVINKDDIVNAIEDAGFEGSLVQSNQQDKLVLRVDGILNELDAQVLEGILTRLNGV 235

Query: 231 RQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNM 290
           RQFR D+ISGELEV+FDPE +SSRSLVDGI     GKF++RVM+P+ R++S+D+ E SNM
Sbjct: 236 RQFRLDRISGELEVVFDPEVVSSRSLVDGIEEDGFGKFKLRVMSPYERLSSKDTGEASNM 295

Query: 291 FRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRF 350
           FR FISSL LSIP+FFI+VICPHI L  ALL+WRCGPF+MGDWL WALVSV+QFVIGKRF
Sbjct: 296 FRRFISSLVLSIPLFFIQVICPHIALFDALLVWRCGPFMMGDWLKWALVSVIQFVIGKRF 355

Query: 351 YTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLF 410
           Y AA RALRNGSTNMDVLVALGTSA+YFYSVGALLYG VTGFWSPTYF+ SAMLITFVL 
Sbjct: 356 YVAAWRALRNGSTNMDVLVALGTSASYFYSVGALLYGAVTGFWSPTYFDASAMLITFVLL 415

Query: 411 GKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPG 470
           GKYLE LAKGKTSDA+KKLV+L PATA+L+ + K GK + EREIDALLIQ GDTLKV PG
Sbjct: 416 GKYLESLAKGKTSDAMKKLVQLTPATAILLTEGKGGKLVGEREIDALLIQPGDTLKVHPG 475

Query: 471 TKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVL 530
            K+PADG+VVWG+SYVNESMVTGE+VPV KE++SPVIGGTIN+HG LH++ATKVGSDAVL
Sbjct: 476 AKIPADGVVVWGSSYVNESMVTGESVPVSKEVDSPVIGGTINMHGALHMKATKVGSDAVL 535

Query: 531 SQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPEN 590
           SQIISLVETAQMSKAPIQKFAD+VASIFVP+V+TLALFT + W + G +GAYP++WLPEN
Sbjct: 536 SQIISLVETAQMSKAPIQKFADYVASIFVPVVITLALFTLVGWSIGGAVGAYPDEWLPEN 595

Query: 591 GTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYV 650
           GTHFVF+LMFSISVVVIACPCALGLATPTAVMVATGVGA NGVLIKGGDALE+A K+KYV
Sbjct: 596 GTHFVFSLMFSISVVVIACPCALGLATPTAVMVATGVGATNGVLIKGGDALEKAHKVKYV 655

Query: 651 IFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDD 710
           IFDKTGTLTQG+ATVTT KVF++MDRGEFLTLVASAEASSEHPLAKA+V YARHFHFFD+
Sbjct: 656 IFDKTGTLTQGKATVTTTKVFSEMDRGEFLTLVASAEASSEHPLAKAIVAYARHFHFFDE 715

Query: 711 PSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPD 770
            +   DG++++K+   SGWLLD SDFSALPG+GIQC ++ K +LVGNRKL++E+ I IPD
Sbjct: 716 ST--EDGETNNKDLQNSGWLLDTSDFSALPGKGIQCLVNEKMILVGNRKLMSENAINIPD 773

Query: 771 HVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDN 830
           HVE FV +LEES +TG++VAY+  L+GVMGIADP+KREAA+VVEGLL+MGVRP+MVTGDN
Sbjct: 774 HVEKFVEDLEESGKTGVIVAYNGKLVGVMGIADPLKREAALVVEGLLRMGVRPIMVTGDN 833

Query: 831 WRTAHAVAREVCVID 845
           WRTA AVA+EV + D
Sbjct: 834 WRTARAVAKEVGIED 848

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|14194135|gb|AAK56262.1|AF367273_1 AT5g44790/K23L20_14 [Arabidopsis thaliana]

 Score = 1317 bits (3408), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/855 (75%), Positives = 737/855 (86%), Gaps = 18/855 (2%)

Query: 2   MALSNRDLQLTELNGGGSSDGDDREDEWLLNNYDGKKE-----------RIGDGMRRIQV 50
           MA S RDLQLT + GG SS   D E+  LL++Y  +             R   G+R+IQV
Sbjct: 1   MAPSRRDLQLTPVTGGSSSQISDMEEVGLLDSYHNEANADDILTKIEEGRDVSGLRKIQV 60

Query: 51  GVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFE 110
           GVTGMTCAACSNSVE ALM + GV KASVALLQN+ADVVFDP+LVK+EDIK AIEDAGFE
Sbjct: 61  GVTGMTCAACSNSVEAALMDVNGVFKASVALLQNRADVVFDPNLVKEEDIKEAIEDAGFE 120

Query: 111 AEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEV 170
           AEILAE  T     Q T+VGQ+TIGGMTCAACVNSVEGILR LPGVKRAVVAL+TSLGEV
Sbjct: 121 AEILAEEQT-----QATLVGQFTIGGMTCAACVNSVEGILRDLPGVKRAVVALSTSLGEV 175

Query: 171 EYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGV 230
           EYDP VI+KDDI NAIEDAGFE S VQS+ QDK++L+V G+L ELDA  LEGIL+   GV
Sbjct: 176 EYDPNVINKDDIVNAIEDAGFEGSLVQSNQQDKLVLRVDGILNELDAQVLEGILTRLNGV 235

Query: 231 RQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNM 290
           RQFR D+ISGELEV+FDPE +SSRSLVDGI     GKF++RVM+P+ R++S+D+ E SNM
Sbjct: 236 RQFRLDRISGELEVVFDPEVVSSRSLVDGIEEDGFGKFKLRVMSPYERLSSKDTGEASNM 295

Query: 291 FRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRF 350
           FR FISSL LSIP+FFI+VICPHI L  ALL+WRCGPF+MGDWL WALVSV+QFVIGKRF
Sbjct: 296 FRRFISSLVLSIPLFFIQVICPHIALFDALLVWRCGPFMMGDWLKWALVSVIQFVIGKRF 355

Query: 351 YTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLF 410
           Y AA RALRNGSTNMDVLVALGTSA+YFYSVGALLYG VTGFWSPTYF+ SAMLITFVL 
Sbjct: 356 YVAAWRALRNGSTNMDVLVALGTSASYFYSVGALLYGAVTGFWSPTYFDASAMLITFVLL 415

Query: 411 GKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPG 470
           GKYLE LAKGKTSDA+KKLV+L PATA+L+ + K GK + EREIDALLIQ GDTLKV PG
Sbjct: 416 GKYLESLAKGKTSDAMKKLVQLTPATAILLTEGKGGKLVGEREIDALLIQPGDTLKVHPG 475

Query: 471 TKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVL 530
            K+PADG+VVWG+SYVNESMVTGE+VPV KE++SPVIGGTIN+HG LH++ATKVGSDAVL
Sbjct: 476 AKIPADGVVVWGSSYVNESMVTGESVPVSKEVDSPVIGGTINMHGALHMKATKVGSDAVL 535

Query: 531 SQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPEN 590
           SQIISLVETAQMSKAPIQKFAD+VASIFVP+V+TLALFT + W + G +GAYP++WLPEN
Sbjct: 536 SQIISLVETAQMSKAPIQKFADYVASIFVPVVITLALFTLVGWSIGGAVGAYPDEWLPEN 595

Query: 591 GTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYV 650
           GTHFVF+LMFSISVVVIACPCALGLATPTAVMVATGVGA NGVLIKGGDALE+A K+KYV
Sbjct: 596 GTHFVFSLMFSISVVVIACPCALGLATPTAVMVATGVGATNGVLIKGGDALEKAHKVKYV 655

Query: 651 IFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDD 710
           IFDKTGTLTQG+ATVTT KVF++MDRGEFLTLVASAEASSEHPLAKA+V YARHFHFFD+
Sbjct: 656 IFDKTGTLTQGKATVTTTKVFSEMDRGEFLTLVASAEASSEHPLAKAIVAYARHFHFFDE 715

Query: 711 PSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPD 770
            +   DG++++K+   SGWLLD SDFSALPG+GIQC ++ K +LVGNRKL++E+ I IPD
Sbjct: 716 ST--EDGETNNKDLQNSGWLLDTSDFSALPGKGIQCLVNEKMILVGNRKLMSENAINIPD 773

Query: 771 HVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDN 830
           HVE FV +LEES +TG++VAY+  L+GVMGIADP+KREAA+VVEGLL+MGVRP+MVTGDN
Sbjct: 774 HVEKFVEDLEESGKTGVIVAYNGKLVGVMGIADPLKREAALVVEGLLRMGVRPIMVTGDN 833

Query: 831 WRTAHAVAREVCVID 845
           WRTA AVA+EV + D
Sbjct: 834 WRTARAVAKEVGIED 848

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433505|ref|XP_004134538.1| PREDICTED: copper-transporting ATPase RAN1-like [Cucumis sativus]

 Score = 1317 bits (3408), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 646/856 (75%), Positives = 737/856 (86%), Gaps = 14/856 (1%)

Query: 2   MALSNRDLQLTE-------LNGGGSSDG--DDREDEWLLNNYDGKKERIG---DGMRRIQ 49
           MA   RDLQL         L    ++D   +D ED  LL++Y+ ++E +G   DGM R+Q
Sbjct: 1   MAPGLRDLQLAHVAADDRRLPAISAADDIPEDLEDVRLLDSYERQEENLGQIRDGMNRVQ 60

Query: 50  VGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGF 109
           V V+GMTCAACSNSVE AL G+ GV  ASVALLQN+ADVVFDP LVK+EDIK AIEDAGF
Sbjct: 61  VTVSGMTCAACSNSVEAALRGVNGVLMASVALLQNRADVVFDPSLVKEEDIKEAIEDAGF 120

Query: 110 EAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGE 169
           EAEI+ E+++ G K  GT+VGQ+TIGGMTCAACVNSVEGIL+ LPGV+RAVVALATSLGE
Sbjct: 121 EAEIIPETTSVGKKSHGTLVGQFTIGGMTCAACVNSVEGILKDLPGVRRAVVALATSLGE 180

Query: 170 VEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKG 229
           VEYDPT+ SKDDI NAIEDAGFEASFVQSS QDKILL V G+  E+D  FLE ILSN KG
Sbjct: 181 VEYDPTITSKDDIVNAIEDAGFEASFVQSSEQDKILLTVAGIAGEVDVQFLEAILSNLKG 240

Query: 230 VRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSN 289
           V++F FD  SG LE++FDPE +  RSLVD I GRSN KF++ V +P+ R+TS+D EE +N
Sbjct: 241 VKRFLFDSTSGRLEIVFDPEVVGPRSLVDEIEGRSNRKFKLHVTSPYTRLTSKDVEEANN 300

Query: 290 MFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKR 349
           MFRLFISSLFLS+ +F  RVICPHIPL+Y+LLLWRCGPFLM DWL WALV+VVQFVIGKR
Sbjct: 301 MFRLFISSLFLSVLIFLQRVICPHIPLIYSLLLWRCGPFLMDDWLKWALVTVVQFVIGKR 360

Query: 350 FYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVL 409
           FY AA RALRNGSTNMDVLVALGT+A+Y YSV ALLYG VTGFWSPTYFETSAMLITFVL
Sbjct: 361 FYVAAARALRNGSTNMDVLVALGTTASYVYSVCALLYGAVTGFWSPTYFETSAMLITFVL 420

Query: 410 FGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLP 469
            GKYLE LAKGKTSDAIKKLVELAPATALL+++DK G  IEEREIDALLIQ GD LKVLP
Sbjct: 421 LGKYLECLAKGKTSDAIKKLVELAPATALLLIRDKGGNLIEEREIDALLIQPGDVLKVLP 480

Query: 470 GTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAV 529
           GTK+PADG+VVWG+SYVNESMVTGE++PVLKE++  VIGGTIN HG LHI+ATKVGSDAV
Sbjct: 481 GTKIPADGVVVWGSSYVNESMVTGESIPVLKEVSLNVIGGTINFHGALHIRATKVGSDAV 540

Query: 530 LSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPE 589
           L+QIISLVETAQMSKAPIQKFADFVASIFVP VV +AL T   WYV G+LGAYP +WLPE
Sbjct: 541 LNQIISLVETAQMSKAPIQKFADFVASIFVPTVVAMALCTLFGWYVGGILGAYPAEWLPE 600

Query: 590 NGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKY 649
           NG +FVF+LMF+I+VVVIACPCALGLATPTAVMVATGVGA+NGVLIKGGDALERAQK+KY
Sbjct: 601 NGNYFVFSLMFAIAVVVIACPCALGLATPTAVMVATGVGASNGVLIKGGDALERAQKVKY 660

Query: 650 VIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFD 709
           VIFDKTGTLTQG+ATVTTAK+FT++ RG+FL LVASAEASSEHPL KA+VEYARHFHFFD
Sbjct: 661 VIFDKTGTLTQGKATVTTAKIFTEISRGDFLKLVASAEASSEHPLGKAIVEYARHFHFFD 720

Query: 710 DPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIP 769
           +PS   + ++ SKES  SGWL DV+DFSALPG+GIQC I GK++LVGNRKL+NE GI+I 
Sbjct: 721 EPSATKNVENQSKES--SGWLFDVTDFSALPGQGIQCTIEGKRILVGNRKLMNERGISIA 778

Query: 770 DHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGD 829
            HV++FV+ELEESA+TGILVA DDNLIGV+GIADP+KREAAVVVEGL+KMGV PVMVTGD
Sbjct: 779 PHVDNFVIELEESAKTGILVACDDNLIGVVGIADPLKREAAVVVEGLVKMGVSPVMVTGD 838

Query: 830 NWRTAHAVAREVCVID 845
           NWRTA AVA+E+ + D
Sbjct: 839 NWRTARAVAKELGIQD 854

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297791321|ref|XP_002863545.1| responsive-to-antagonist1 [Arabidopsis lyrata subsp. lyrata] gi|297309380|gb|EFH39804.1| responsive-to-antagonist1 [Arabidopsis lyrata subsp. lyrata]

 Score = 1310 bits (3391), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 641/858 (74%), Positives = 740/858 (86%), Gaps = 21/858 (2%)

Query: 2   MALSNRDLQLTELNGGGSSDGDDREDEWLLNNYDGKKERIGD--------------GMRR 47
           MA S RDLQLT + G  SS+  D E+  LL++Y   +E   D              G+R+
Sbjct: 1   MAPSRRDLQLTPVTGESSSEVGDMEEVRLLDSYY-NEENADDILSKIEEGGGGDDSGLRK 59

Query: 48  IQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDA 107
           IQVG+TGMTCAACSNSVEGALM + GV KASVALLQN+ADVVFDP+LVK+EDIK AIEDA
Sbjct: 60  IQVGITGMTCAACSNSVEGALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEAIEDA 119

Query: 108 GFEAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSL 167
           GFEAEILAE   +G     T+VGQ+TIGGMTCAACVNSVEGILR LPGVKRAVVAL+TSL
Sbjct: 120 GFEAEILAEVVATGT----TLVGQFTIGGMTCAACVNSVEGILRDLPGVKRAVVALSTSL 175

Query: 168 GEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNF 227
           GEVEYDP VI+KDDI  AIEDAGFE S VQS+ QDK++L+V G++ ELDA  LEGIL+  
Sbjct: 176 GEVEYDPNVINKDDIVTAIEDAGFEGSLVQSNQQDKLVLRVEGIMNELDAQVLEGILTRL 235

Query: 228 KGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEET 287
            GVRQFR D+ISGELEV+FDPE +SSRSLVDGI G   GKF++RVM+P+ R+TS+D+ E 
Sbjct: 236 NGVRQFRLDRISGELEVVFDPEVVSSRSLVDGIEGDGYGKFKLRVMSPYERLTSKDTGEA 295

Query: 288 SNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIG 347
           SNMFR FISSL LSIP+FFI+VICPHI L  ALL+WRCGPF+MGDWL WALVSV+QFVIG
Sbjct: 296 SNMFRRFISSLVLSIPLFFIQVICPHIALFDALLVWRCGPFMMGDWLKWALVSVIQFVIG 355

Query: 348 KRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITF 407
           KRFY AA RALRNGSTNMDVLVALGTSA+YFYSVGALLYG VTGFWSPTYF+ SAMLITF
Sbjct: 356 KRFYVAAWRALRNGSTNMDVLVALGTSASYFYSVGALLYGAVTGFWSPTYFDASAMLITF 415

Query: 408 VLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKV 467
           VL GKYLE LAKGKTSDA+KKLV+L PATA+L+++ K GK + EREIDALLIQ GDTLKV
Sbjct: 416 VLLGKYLESLAKGKTSDAMKKLVQLTPATAILLIEGKGGKLVGEREIDALLIQPGDTLKV 475

Query: 468 LPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSD 527
            PG K+PADG+VVWG+SYVNESMVTGE+VPV KE++SPVIGGTIN+HG LH++ATKVGSD
Sbjct: 476 HPGAKIPADGVVVWGSSYVNESMVTGESVPVSKEVDSPVIGGTINMHGALHMKATKVGSD 535

Query: 528 AVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWL 587
           AVLSQIISLVETAQMSKAPIQKFAD+VASIFVP+V+TLALFT + W + G +GAYP++WL
Sbjct: 536 AVLSQIISLVETAQMSKAPIQKFADYVASIFVPVVITLALFTLIGWSIGGAVGAYPDEWL 595

Query: 588 PENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKI 647
           PENGTHFVF+LMFSISVVVIACPCALGLATPTAVMVATGVGA NGVLIKGGDALE+A K+
Sbjct: 596 PENGTHFVFSLMFSISVVVIACPCALGLATPTAVMVATGVGATNGVLIKGGDALEKAHKV 655

Query: 648 KYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHF 707
           KYVIFDKTGTLTQG+ATVTT KVF++MDRGEFLTLVASAEASSEHPLAKA+V YARHFHF
Sbjct: 656 KYVIFDKTGTLTQGKATVTTTKVFSEMDRGEFLTLVASAEASSEHPLAKAIVAYARHFHF 715

Query: 708 FDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGIT 767
           FD+ +   DG++++K+   SGWLL+ SDFSALPG+GIQC ++ K +LVGNRKL++E+ IT
Sbjct: 716 FDEST--EDGETNNKDLQNSGWLLNTSDFSALPGKGIQCLVNEKMILVGNRKLMSENTIT 773

Query: 768 IPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVT 827
           IPDHVE FV +LEES +TG++VAY   L+GVMGIADP+KREAAVVVEGLL+MGV+P+MVT
Sbjct: 774 IPDHVEKFVEDLEESGKTGVIVAYSGKLVGVMGIADPLKREAAVVVEGLLRMGVQPIMVT 833

Query: 828 GDNWRTAHAVAREVCVID 845
           GDNWRTA AVA+EV + D
Sbjct: 834 GDNWRTARAVAKEVGIKD 851

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	845
TAIR|locus:2156354	1001	RAN1 "RESPONSIVE-TO-ANTAGONIST	0.990	0.836	0.746	0.0
TAIR|locus:2031361	995	HMA5 "heavy metal atpase 5" [A	0.920	0.781	0.447	1.9e-177
UNIPROTKB|F1MKI1	1505	ATP7B "Uncharacterized protein	0.749	0.420	0.376	6e-139
ZFIN|ZDB-GENE-110407-7	1364	si:dkey-276l13.3 "si:dkey-276l	0.719	0.445	0.393	5.6e-137
UNIPROTKB|F1PK99	1499	ATP7A "Uncharacterized protein	0.701	0.395	0.375	2.5e-135
UNIPROTKB|F1N8W2	1390	ATP7B "Uncharacterized protein	0.711	0.432	0.372	6.6e-135
UNIPROTKB|F1P5C8	1440	ATP7B "Uncharacterized protein	0.730	0.428	0.369	1e-132
UNIPROTKB|E1C2H7	1414	ATP7B "Uncharacterized protein	0.756	0.451	0.360	1.8e-132
RGD|2179	1492	Atp7a "ATPase, Cu++ transporti	0.525	0.297	0.416	4.7e-131
DICTYBASE|DDB_G0284141	985	atp7a "copper-transporting ATP	0.389	0.334	0.513	1.3e-130

TAIR|locus:2156354 RAN1 "RESPONSIVE-TO-ANTAGONIST 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 3246 (1147.7 bits), Expect = 0., P = 0.
 Identities = 638/855 (74%), Positives = 731/855 (85%)

Query:     2 MALSNRDLQLTELNXXXXXXXXXXXXXWLLNNYDG---------KKERIGD--GMRRIQV 50
             MA S RDLQLT +               LL++Y           K E   D  G+R+IQV
Sbjct:     1 MAPSRRDLQLTPVTGGSSSQISDMEEVGLLDSYHNEANADDILTKIEEGRDVSGLRKIQV 60

Query:    51 GVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFE 110
             GVTGMTCAACSNSVE ALM + GV KASVALLQN+ADVVFDP+LVK+EDIK AIEDAGFE
Sbjct:    61 GVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEAIEDAGFE 120

Query:   111 AEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEV 170
             AEILAE  T     Q T+VGQ+TIGGMTCAACVNSVEGILR LPGVKRAVVAL+TSLGEV
Sbjct:   121 AEILAEEQT-----QATLVGQFTIGGMTCAACVNSVEGILRDLPGVKRAVVALSTSLGEV 175

Query:   171 EYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGV 230
             EYDP VI+KDDI NAIEDAGFE S VQS+ QDK++L+V G+L ELDA  LEGIL+   GV
Sbjct:   176 EYDPNVINKDDIVNAIEDAGFEGSLVQSNQQDKLVLRVDGILNELDAQVLEGILTRLNGV 235

Query:   231 RQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNM 290
             RQFR D+ISGELEV+FDPE +SSRSLVDGI     GKF++RVM+P+ R++S+D+ E SNM
Sbjct:   236 RQFRLDRISGELEVVFDPEVVSSRSLVDGIEEDGFGKFKLRVMSPYERLSSKDTGEASNM 295

Query:   291 FRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRF 350
             FR FISSL LSIP+FFI+VICPHI L  ALL+WRCGPF+MGDWL WALVSV+QFVIGKRF
Sbjct:   296 FRRFISSLVLSIPLFFIQVICPHIALFDALLVWRCGPFMMGDWLKWALVSVIQFVIGKRF 355

Query:   351 YTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLF 410
             Y AA RALRNGSTNMDVLVALGTSA+YFYSVGALLYG VTGFWSPTYF+ SAMLITFVL 
Sbjct:   356 YVAAWRALRNGSTNMDVLVALGTSASYFYSVGALLYGAVTGFWSPTYFDASAMLITFVLL 415

Query:   411 GKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPG 470
             GKYLE LAKGKTSDA+KKLV+L PATA+L+ + K GK + EREIDALLIQ GDTLKV PG
Sbjct:   416 GKYLESLAKGKTSDAMKKLVQLTPATAILLTEGKGGKLVGEREIDALLIQPGDTLKVHPG 475

Query:   471 TKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVL 530
              K+PADG+VVWG+SYVNESMVTGE+VPV KE++SPVIGGTIN+HG LH++ATKVGSDAVL
Sbjct:   476 AKIPADGVVVWGSSYVNESMVTGESVPVSKEVDSPVIGGTINMHGALHMKATKVGSDAVL 535

Query:   531 SQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPEN 590
             SQIISLVETAQMSKAPIQKFAD+VASIFVP+V+TLALFT + W + G +GAYP++WLPEN
Sbjct:   536 SQIISLVETAQMSKAPIQKFADYVASIFVPVVITLALFTLVGWSIGGAVGAYPDEWLPEN 595

Query:   591 GTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYV 650
             GTHFVF+LMFSISVVVIACPCALGLATPTAVMVATGVGA NGVLIKGGDALE+A K+KYV
Sbjct:   596 GTHFVFSLMFSISVVVIACPCALGLATPTAVMVATGVGATNGVLIKGGDALEKAHKVKYV 655

Query:   651 IFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDD 710
             IFDKTGTLTQG+ATVTT KVF++MDRGEFLTLVASAEASSEHPLAKA+V YARHFHFFD+
Sbjct:   656 IFDKTGTLTQGKATVTTTKVFSEMDRGEFLTLVASAEASSEHPLAKAIVAYARHFHFFDE 715

Query:   711 PSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPD 770
              +   DG++++K+   SGWLLD SDFSALPG+GIQC ++ K +LVGNRKL++E+ I IPD
Sbjct:   716 ST--EDGETNNKDLQNSGWLLDTSDFSALPGKGIQCLVNEKMILVGNRKLMSENAINIPD 773

Query:   771 HVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDN 830
             HVE FV +LEES +TG++VAY+  L+GVMGIADP+KREAA+VVEGLL+MGVRP+MVTGDN
Sbjct:   774 HVEKFVEDLEESGKTGVIVAYNGKLVGVMGIADPLKREAALVVEGLLRMGVRPIMVTGDN 833

Query:   831 WRTAHAVAREVCVID 845
             WRTA AVA+EV + D
Sbjct:   834 WRTARAVAKEVGIED 848

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005507 "copper ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0006825 "copper ion transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016820 "hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances" evidence=IEA

GO:0030001 "metal ion transport" evidence=IEA

GO:0043682 "copper-transporting ATPase activity" evidence=IEA

GO:0046034 "ATP metabolic process" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005375 "copper ion transmembrane transporter activity" evidence=IGI

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA;IMP;TAS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0009723 "response to ethylene stimulus" evidence=IMP

GO:0010119 "regulation of stomatal movement" evidence=IMP

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0000303 "response to superoxide" evidence=RCA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0008219 "cell death" evidence=RCA

GO:0009755 "hormone-mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2031361 HMA5 "heavy metal atpase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 1723 (611.6 bits), Expect = 1.9e-177, P = 1.9e-177
 Identities = 363/811 (44%), Positives = 517/811 (63%)

Query:    41 IGDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDI 100
             I D + R    V GMTC+AC+ SVE A+  L G+  A +  L N+A ++F P+ V  E I
Sbjct:    46 IDDPISRAVFQVLGMTCSACAGSVEKAIKRLPGIHDAVIDALNNRAQILFYPNSVDVETI 105

Query:   101 KNAIEDAGFEAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAV 160
             +  IEDAGFEA ++ E+  +    Q   V +  I GMTC +C +++E +L+ + GV+RA 
Sbjct:   106 RETIEDAGFEASLI-ENEANERSRQ---VCRIRINGMTCTSCSSTIERVLQSVNGVQRAH 161

Query:   161 VALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQD--KILLQVTGVLCELDAH 218
             VALA    E+ YDP + S D +   IE+AGFEA  + S+G+D  KI L++ G L +    
Sbjct:   162 VALAIEEAEIHYDPRLSSYDRLLEEIENAGFEAVLI-STGEDVSKIDLKIDGELTDESMK 220

Query:   219 FLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGR---SNGKFQIRVMNP 275
              +E  L    GV+       + ++ VL+ P+    R+ +  I       +G  +  + + 
Sbjct:   221 VIERSLEALPGVQSVEISHGTDKISVLYKPDVTGPRNFIQVIESTVFGHSGHIKATIFSE 280

Query:   276 FARMTSRDSE---ETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFL-MG 331
                   R+S+   E    ++ F+ SL  ++PVF   ++  +IP +  LL+++    L +G
Sbjct:   281 GG--VGRESQKQGEIKQYYKSFLWSLVFTVPVFLTAMVFMYIPGIKDLLMFKVINMLTVG 338

Query:   332 DWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVT- 390
             + +   L + VQFVIG RFYT + +ALR GS NMDVL+ALGT+AAYFYS+  +L    + 
Sbjct:   339 EIIRCVLATPVQFVIGWRFYTGSYKALRRGSANMDVLIALGTNAAYFYSLYTVLRAATSP 398

Query:   391 GFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIE 450
              F    +FETSAMLI+F++ GKYLE++AKGKTS AI KL+ LAP TA+L+  DK G    
Sbjct:   399 DFKGVDFFETSAMLISFIILGKYLEVMAKGKTSQAIAKLMNLAPDTAILLSLDKEGNVTG 458

Query:   451 EREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGT 510
             E EID  LIQ  D +K++PG K+ +DG V+WG S+VNESM+TGEA PV K     VIGGT
Sbjct:   459 EEEIDGRLIQKNDVIKIVPGAKVASDGYVIWGQSHVNESMITGEARPVAKRKGDTVIGGT 518

Query:   511 INLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTW 570
             +N +GVLH++ T+VGS++ L+QI+ LVE+AQ++KAP+QK AD ++  FVP+V+ L+  TW
Sbjct:   519 LNENGVLHVKVTRVGSESALAQIVRLVESAQLAKAPVQKLADRISKFFVPLVIFLSFSTW 578

Query:   571 LCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGAN 630
             L W++AG L  YPE W+P +   F  AL F ISV+VIACPCALGLATPTAVMV TGVGA+
Sbjct:   579 LAWFLAGKLHWYPESWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGAS 638

Query:   631 NGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASS 690
              GVLIKGG ALERA K+  ++FDKTGTLT G+  V   K+   M   EF  LVA+ E +S
Sbjct:   639 QGVLIKGGQALERAHKVNCIVFDKTGTLTMGKPVVVKTKLLKNMVLREFYELVAATEVNS 698

Query:   691 EHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISG 750
             EHPLAKA+VEYA+ F   DD   NP             W  +  DF ++ G+G++  + G
Sbjct:   699 EHPLAKAIVEYAKKFR--DDEE-NP------------AWP-EACDFVSITGKGVKATVKG 742

Query:   751 KQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAA 810
             ++++VGN+ L+N+  + IPD  E  + + E+ A+TGILV+ +  LIGV+ ++DP+K  A 
Sbjct:   743 REIMVGNKNLMNDHKVIIPDDAEELLADSEDMAQTGILVSINSELIGVLSVSDPLKPSAR 802

Query:   811 VVVEGLLKMGVRPVMVTGDNWRTAHAVAREV 841
               +  L  M ++ +MVTGDNW TA+++AREV
Sbjct:   803 EAISILKSMNIKSIMVTGDNWGTANSIAREV 833

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030001 "metal ion transport" evidence=IEA

GO:0043682 "copper-transporting ATPase activity" evidence=IEA

GO:0046034 "ATP metabolic process" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0010273 "detoxification of copper ion" evidence=IMP

GO:0046688 "response to copper ion" evidence=IMP

GO:0010043 "response to zinc ion" evidence=RCA

UNIPROTKB|F1MKI1 ATP7B "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 971 (346.9 bits), Expect = 6.0e-139, Sum P(3) = 6.0e-139
 Identities = 255/677 (37%), Positives = 365/677 (53%)

Query:   134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
             I GMTCA+CV+++E  L+  PG+   +VAL     EV+Y+P  I   +IA  I+D GFEA
Sbjct:   535 ISGMTCASCVSNIERNLQKEPGILSVLVALMAGKAEVKYNPEAIQPLEIAKLIQDLGFEA 594

Query:   194 SFVQS-SGQDKIL-LQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEAL 251
             + ++  +G D  L L +TG+ C    H +E  L   +G+        + +  V FDPE +
Sbjct:   595 AVMEDYTGSDGDLELMITGMTCASCVHNIESKLRRTEGITYASVALATSKAHVKFDPEII 654

Query:   252 SSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSE-ETSNMFRLFISSLFLSIPVF--FIR 308
               R +V  I     G F+  +          D + E       F+ SL   IPV    I 
Sbjct:   655 GPRDIVKLI--EEIG-FRASLAQRIPNAHHLDHKVEIKQWKNSFLCSLVFGIPVMGLMIY 711

Query:   309 VICP-HIPLVYALLLWRCGPFL-MGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMD 366
             ++ P H P    +L     P L + + + + L + VQF+ G  FY  A ++LR+G  NMD
Sbjct:   712 MLIPSHEPQS-TVLDHNVIPGLSILNLIFFILCTFVQFLGGWYFYVQAYKSLRHGMANMD 770

Query:   367 VLVALGTSAAYFYSVGALLYGVVT-GFWSP-TYFETSAMLITFVLFGKYLEILAKGKTSD 424
             VL+ L TS AY YS+  L+  V      SP T+F+T  ML  F+  G++LE + K KTS+
Sbjct:   771 VLIVLATSVAYVYSLVILVVAVAEKAERSPVTFFDTPPMLFVFIALGRWLEHVVKSKTSE 830

Query:   425 AIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTS 484
             A+ KL+ L    A +V   +    I E ++   L+Q GD +KV+PG K P DG V+ G +
Sbjct:   831 ALAKLMSLQATEATVVTLGEDNVIIREEQVPMELVQRGDIIKVVPGGKFPVDGKVLEGNT 890

Query:   485 YVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSK 544
               +ES++TGEA+PV K+  S VI G++N HG + + AT VG+D  L+QI+ LVE AQMSK
Sbjct:   891 MADESLITGEAMPVTKKPGSMVIAGSMNAHGSVLVTATHVGNDTTLAQIVKLVEEAQMSK 950

Query:   545 APIQKFADFVASIFVPIVVTLALFTWLCWYVAG-----VLGAY---PEQWLPENGTHFVF 596
             APIQ+ AD  +  FVP ++ ++  T + W   G     V+  Y   P + + +      F
Sbjct:   951 APIQQLADRFSGYFVPFIIIISTVTLVVWIGIGFTDFGVVQKYFPVPSKGISQAEVVLRF 1010

Query:   597 ALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTG 656
             A   SI+V+ IACPC+LGLATPTAVMV TGV A NG+LIKGG  LE A KIK V+FDKTG
Sbjct:  1011 AFQTSITVLCIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDKTG 1070

Query:   657 TLTQGRATVTTAKVFTK---MDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSL 713
             T+T G   V+   +      +   + L +V +AEASSEHPL  AV  Y            
Sbjct:  1071 TITHGVPKVSRVLLLVDVATLPLRKVLAVVGTAEASSEHPLGVAVTRYC----------- 1119

Query:   714 NPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVE 773
                     KE  G+  L   +DF A+PG GI C +S  + ++   + L     T  + V 
Sbjct:  1120 --------KEELGTETLGCCTDFQAVPGCGISCKVSSVESILAQGERLQGPLTTHLNRVG 1171

Query:   774 SFVVELEESART-GILV 789
             S   E + + +T  +L+
Sbjct:  1172 SNPTETDAATQTFSVLI 1188

GO:0051208 "sequestering of calcium ion" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0046688 "response to copper ion" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=IEA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

GO:0015680 "intracellular copper ion transport" evidence=IEA

GO:0015677 "copper ion import" evidence=IEA

GO:0007595 "lactation" evidence=IEA

GO:0006882 "cellular zinc ion homeostasis" evidence=IEA

GO:0006878 "cellular copper ion homeostasis" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=IEA

GO:0005770 "late endosome" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005507 "copper ion binding" evidence=IEA

GO:0004008 "copper-exporting ATPase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-110407-7 si:dkey-276l13.3 "si:dkey-276l13.3" [Danio rerio (taxid:7955)]

 Score = 998 (356.4 bits), Expect = 5.6e-137, Sum P(3) = 5.6e-137
 Identities = 258/655 (39%), Positives = 353/655 (53%)

Query:   134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
             + GMTCA+CV+++E  L    G+K  +VAL     EV+YDP ++    I   I   GF A
Sbjct:   389 VTGMTCASCVSNIERNLVKHEGIKSVLVALMAGKAEVKYDPGLLDPAQIVQLISHLGFGA 448

Query:   194 SFVQS-SGQDKIL-LQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEAL 251
             S ++  S QD +L L VTG+ C    H +E  L   KG+++      + +  V FD + +
Sbjct:   449 SVMEEHSVQDGVLDLSVTGMTCASCVHNIESKLLRTKGIQEASVALATNKAHVKFDSDLV 508

Query:   252 SSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNMFRLFISSLFLSIPVFFIRV-- 309
              SR +V  I G   G   I+  N     T    EE       F+ SL   IPV  + +  
Sbjct:   509 GSRDIVRIIEGLGFGVSLIK--NEGLNNTLDHQEEIRQWKHSFLFSLVFGIPVMGLMIYM 566

Query:   310 -ICPHIPLVYALLLWRCGPFLMG-DWLNWA---LVSVVQFVIGKRFYTAAGRALRNGSTN 364
              +       +   +      L G   +N A   L + VQF+ G+ FY  A R+LR+G  N
Sbjct:   567 MVMDSQHKEHGGSMPADQNILPGLSIINLAFFLLCTPVQFLGGRYFYIQAYRSLRHGVAN 626

Query:   365 MDVLVALGTSAAYFYSVGALLYGVVTGF-WSP-TYFETSAMLITFVLFGKYLEILAKGKT 422
             MDVL+ L T+ AY YS   L+  ++ G   SP T+F+T  ML  F+  G++LE +AK KT
Sbjct:   627 MDVLIVLATTIAYVYSFTVLIVAMIEGAKQSPLTFFDTPPMLFVFIALGRWLEHVAKSKT 686

Query:   423 SDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWG 482
             S+A+ KL+ L    A +V        I E ++   L+Q GD +KV PG K P DG V+ G
Sbjct:   687 SEALAKLMSLQATDATIVSLGPDNTIIREEQVSVDLVQRGDVVKVAPGGKFPVDGKVIEG 746

Query:   483 TSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQM 542
             TS  +ES++TGE +PV+K+  S VI G+IN HG L ++AT VGS+  LSQI+ LVE AQ 
Sbjct:   747 TSMADESLITGEPMPVIKKAGSCVIAGSINAHGALLVEATHVGSETTLSQIVKLVEEAQT 806

Query:   543 SKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGA------YP--EQWLPENGTHF 594
             SKAPIQ+ AD ++  FVP +V +++ T   W + G L        +P   Q +       
Sbjct:   807 SKAPIQQLADKLSGYFVPFIVVISILTVTAWLIIGFLDFDVVSKNFPGYNQNISRTEVIV 866

Query:   595 VFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDK 654
              FA   SI+V+ IACPC+LGLATPTAVMV TGVGA NG+LIKGG+ LE A K+  V+FDK
Sbjct:   867 RFAFQASITVLSIACPCSLGLATPTAVMVGTGVGAQNGILIKGGEPLEMAHKVGAVMFDK 926

Query:   655 TGTLTQGRATVTTAKVFTKMDRGEF-----LTLVASAEASSEHPLAKAVVEYARHFHFFD 709
             TGT+T G   VT  +V    DR        L +V +AEASSEHPL  AV +         
Sbjct:   927 TGTITNGVPQVT--RVLVLWDRARLPLRTVLAVVGTAEASSEHPLGMAVAK--------- 975

Query:   710 DPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNES 764
                       H KE  G+  L    DF A+PG GI C +S  + L+ N     E+
Sbjct:   976 ----------HCKEELGAETLGFCHDFQAVPGCGISCKVSSVEDLLQNSPKTQET 1020

GO:0019829 "cation-transporting ATPase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006825 "copper ion transport" evidence=IEA

GO:0030001 "metal ion transport" evidence=IEA

GO:0005507 "copper ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

UNIPROTKB|F1PK99 ATP7A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 924 (330.3 bits), Expect = 2.5e-135, Sum P(4) = 2.5e-135
 Identities = 243/648 (37%), Positives = 351/648 (54%)

Query:   134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
             + GMTCA+CV ++E  LR   G+   +VAL     EV Y+P VI    IA  I + GF A
Sbjct:   493 VTGMTCASCVANIERNLRREEGIYSVLVALMAGKAEVRYNPVVIQPPMIAEFIRELGFGA 552

Query:   194 SFVQSSGQ-DKIL-LQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEAL 251
             + ++++ + D +L L V G+ C    H +E IL+  +G+        + +  + +DPE +
Sbjct:   553 TMIENADEVDGVLELVVRGMTCASCVHKIESILTKHRGIFYCSVALATNKAHIKYDPEII 612

Query:   252 SSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSE-ETSNMFRLFISSLFLSIPVF----F 306
               R ++  +   S G F+  ++      +  D + E     R F+ SLF  IPV     +
Sbjct:   613 GPRDIIHMV--ESLG-FEASLVKKDRSASHLDHKREIRQWRRSFLVSLFFCIPVMGLMIY 669

Query:   307 IRVICPHIPLVY---------------ALLLWRC---GPFLMGDWLNWALVSVVQFVIGK 348
             + V+  H+ +++               ++ L R    G  +M + L++ L   VQF  G 
Sbjct:   670 MMVMDHHLAILHHNQNMSQEEMINIHSSMFLERQILPGLSIM-NLLSFLLCVPVQFFGGW 728

Query:   349 RFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVT-GFWSP-TYFETSAMLIT 406
              FY  A +AL++ + NMDVL+ L T+ A+ YS+  LL  +      +P T+F+T  ML  
Sbjct:   729 YFYIQAYKALKHKTANMDVLIVLATTIAFAYSLVILLVAMYERAKVNPITFFDTPPMLFV 788

Query:   407 FVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLK 466
             F+  G++LE +AKGKTS+A+ KL+ L    A +V  D     + E ++D  L+Q GD +K
Sbjct:   789 FIALGRWLEHIAKGKTSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIK 848

Query:   467 VLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGS 526
             V+PG K P DG V+ G S V+ES++TGEA+PV K+  S VI G+IN +G L I+AT VG+
Sbjct:   849 VVPGGKFPVDGRVIEGHSMVDESLITGEAMPVAKKSGSTVIAGSINQNGSLLIRATHVGA 908

Query:   527 DAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLG-AYPEQ 585
             +  LSQI+ LVE AQ SKAPIQ+FAD ++  FVP +V +++ T L W + G L     E 
Sbjct:   909 ETTLSQIVKLVEEAQTSKAPIQQFADKLSGYFVPFIVIISIATLLVWIIIGFLNFEIVET 968

Query:   586 WLP-------ENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGG 638
             + P          T   FA   SI+V+ IACPC+LGLATPTAVMV TGVGA NG+LIKGG
Sbjct:   969 YFPGYNRSISRTETIIRFAFQASITVLCIACPCSLGLATPTAVMVGTGVGAQNGILIKGG 1028

Query:   639 DALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAV 698
             + LE A K+K V+FDKTGT+T G   V   K+           LV S   S    LA   
Sbjct:  1029 EPLEMAHKVKVVVFDKTGTITHGTPVVNQVKI-----------LVESNRISRNKILAIVG 1077

Query:   699 VEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQC 746
                +   H    P L      + K+   +  L    DF  +PG GI C
Sbjct:  1078 TAESNSEH----P-LGAAITKYCKQELDTETLGTCIDFQVVPGCGISC 1120

GO:0051542 "elastin biosynthetic process" evidence=IEA

GO:0051353 "positive regulation of oxidoreductase activity" evidence=IEA

GO:0051216 "cartilage development" evidence=IEA

GO:0048813 "dendrite morphogenesis" evidence=IEA

GO:0048554 "positive regulation of metalloenzyme activity" evidence=IEA

GO:0048553 "negative regulation of metalloenzyme activity" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0048251 "elastic fiber assembly" evidence=IEA

GO:0043588 "skin development" evidence=IEA

GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA

GO:0043473 "pigmentation" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0043005 "neuron projection" evidence=IEA

GO:0042428 "serotonin metabolic process" evidence=IEA

GO:0042421 "norepinephrine biosynthetic process" evidence=IEA

GO:0042417 "dopamine metabolic process" evidence=IEA

GO:0042414 "epinephrine metabolic process" evidence=IEA

GO:0042093 "T-helper cell differentiation" evidence=IEA

GO:0032767 "copper-dependent protein binding" evidence=IEA

GO:0031069 "hair follicle morphogenesis" evidence=IEA

GO:0030199 "collagen fibril organization" evidence=IEA

GO:0030140 "trans-Golgi network transport vesicle" evidence=IEA

GO:0021860 "pyramidal neuron development" evidence=IEA

GO:0021702 "cerebellar Purkinje cell differentiation" evidence=IEA

GO:0019430 "removal of superoxide radicals" evidence=IEA

GO:0018205 "peptidyl-lysine modification" evidence=IEA

GO:0016532 "superoxide dismutase copper chaperone activity" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=IEA

GO:0015677 "copper ion import" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0010273 "detoxification of copper ion" evidence=IEA

GO:0007626 "locomotory behavior" evidence=IEA

GO:0006878 "cellular copper ion homeostasis" evidence=IEA

GO:0006570 "tyrosine metabolic process" evidence=IEA

GO:0006568 "tryptophan metabolic process" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=IEA

GO:0005770 "late endosome" evidence=IEA

GO:0004008 "copper-exporting ATPase activity" evidence=IEA

GO:0002082 "regulation of oxidative phosphorylation" evidence=IEA

GO:0001974 "blood vessel remodeling" evidence=IEA

GO:0001836 "release of cytochrome c from mitochondria" evidence=IEA

GO:0001568 "blood vessel development" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1N8W2 ATP7B "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 938 (335.3 bits), Expect = 6.6e-135, Sum P(4) = 6.6e-135
 Identities = 240/645 (37%), Positives = 348/645 (53%)

Query:   134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
             I GMTCA+CV+++E  L+   G+   +VAL     E++Y P  I   +IA  I++ GFEA
Sbjct:   401 ITGMTCASCVSTIERNLQKEDGIISVLVALMAGKAEIKYKPEFIQPLEIAQLIQNLGFEA 460

Query:   194 SFVQ--SSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEAL 251
             + ++  S  +  + L +TG+ C    H +E  L    G+        + +  + FDPE  
Sbjct:   461 TVIEDHSEAEGNVELLITGMTCASCVHNIESKLMRTNGIFYASVALATCKAHIQFDPEIT 520

Query:   252 SSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNMFRL-FISSLFLSIPVFFIRV- 309
               R ++  I     G F   V        + D ++    +R  F+ SL   IPV  + + 
Sbjct:   521 GPRDIIKII--EEMG-FHASVSRRVPNTHNLDHKKEIQQWRKSFLCSLVFGIPVLILMIY 577

Query:   310 -ICPHIPLVYALLLWR-CGPFL-MGDWLNWALVSVVQ--FVIGKRFYTAAGRALRNGSTN 364
              + P      A++L +   P L + + L + L + VQ  F+ G  FY  A ++L++ + N
Sbjct:   578 MLIPGGEHHGAMVLEQNLIPGLSILNLLFFVLCTFVQQQFLGGWYFYIQAYKSLKHKAAN 637

Query:   365 MDVLVALGTSAAYFYSVGALLYGVVT-GFWSP-TYFETSAMLITFVLFGKYLEILAKGKT 422
             MDVL+ L T+ AY YS   LL  ++     SP T+F+T  ML  F+  G++LE +AK KT
Sbjct:   638 MDVLIVLATTIAYVYSCVILLVAIIEKAEKSPVTFFDTPPMLFVFIALGRWLEHIAKSKT 697

Query:   423 SDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWG 482
             S+A+ KL+ L    A +V        I E ++   L+Q GD +KV+PG K P DG V+ G
Sbjct:   698 SEALAKLISLQATEATVVTLGPDHSIIREEQVPVELVQRGDIVKVVPGGKFPVDGKVIEG 757

Query:   483 TSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQM 542
              S  +ES++TGEA+PV K+  S VI G+IN HG + + AT VG+D  L+QI+ LVE AQM
Sbjct:   758 NSMADESLITGEAMPVTKKPGSTVIAGSINAHGSVLVNATHVGNDTTLAQIVKLVEEAQM 817

Query:   543 SKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGA-YPEQWLPENGTHFV------ 595
             SKAPIQ+ AD  +  FVP ++ ++  T + W   G +     +++ P    H        
Sbjct:   818 SKAPIQQLADKFSGYFVPFIIIISTVTLIAWITIGFINFDIIQKYFPNQNKHLSKAELIL 877

Query:   596 -FALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDK 654
              FA   SI+V+ IACPC+LGLATPTAVMV TGV A NG+LIKGG  LE A KIK V+FDK
Sbjct:   878 RFAFQTSITVLSIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDK 937

Query:   655 TGTLTQGRATVTTAKVF---TKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDP 711
             TGT+T G   V    +      +   + L +V +AEASSEHPL  AV +Y          
Sbjct:   938 TGTITCGVPKVMRVLLLGDTAVLSLKKVLAVVGTAEASSEHPLGVAVTKYC--------- 988

Query:   712 SLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVG 756
                       KE  G+  L   ++F A+PG GI C + G   ++G
Sbjct:   989 ----------KEELGTQSLGYCTNFQAVPGCGISCKVGGVDAVLG 1023

GO:0005507 "copper ion binding" evidence=IEA

GO:0006825 "copper ion transport" evidence=IEA

GO:0019829 "cation-transporting ATPase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1P5C8 ATP7B "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 943 (337.0 bits), Expect = 1.0e-132, Sum P(3) = 1.0e-132
 Identities = 246/665 (36%), Positives = 355/665 (53%)

Query:   134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
             I GMTCA+CV+++E  L+   G+   +VAL     E++Y P  I   +IA  I++ GFEA
Sbjct:   469 ITGMTCASCVSTIERNLQKEDGIISVLVALMAGKAEIKYKPEFIQPLEIAQLIQNLGFEA 528

Query:   194 SFVQ--SSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEAL 251
             + ++  S  +  + L +TG+ C    H +E  L    G+        + +  + FDPE  
Sbjct:   529 TVIEDHSEAEGNVELLITGMTCASCVHNIESKLMRTNGIFYASVALATCKAHIQFDPEIT 588

Query:   252 SSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNMFRL-FISSLFLSIPVFFIRV- 309
               R ++  I     G F   V        + D ++    +R  F+ SL   IPV  + + 
Sbjct:   589 GPRDIIKII--EEMG-FHASVSRRVPNTHNLDHKKEIQQWRKSFLCSLVFGIPVLILMIY 645

Query:   310 -ICPHIPLVYALLLWR-CGPFL-MGDWLNWALVSVVQ--FVIGKRFYTAAGRALRNGSTN 364
              + P      A++L +   P L + + L + L + VQ  F+ G  FY  A ++L++ + N
Sbjct:   646 MLIPGGEHHGAMVLEQNLIPGLSILNLLFFVLCTFVQQQFLGGWYFYIQAYKSLKHKAAN 705

Query:   365 MDVLVALGTSAAYFYSVGALLYGVVT-GFWSP-TYFETSAMLITFVLFGKYLEILAKGKT 422
             MDVL+ L T+ AY YS   LL  ++     SP T+F+T  ML  F+  G++LE +AK KT
Sbjct:   706 MDVLIVLATTIAYVYSCVILLVAIIEKAEKSPVTFFDTPPMLFVFIALGRWLEHIAKSKT 765

Query:   423 SDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWG 482
             S+A+ KL+ L    A +V        I E ++   L+Q GD +KV+PG K P DG V+ G
Sbjct:   766 SEALAKLISLQATEATVVTLGPDHSIIREEQVPVELVQRGDIVKVVPGGKFPVDGKVIEG 825

Query:   483 TSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQM 542
              S  +ES++TGEA+PV K+  S VI G+IN HG + + AT VG+D  L+QI+ LVE AQM
Sbjct:   826 NSMADESLITGEAMPVTKKPGSTVIAGSINAHGSVLVNATHVGNDTTLAQIVKLVEEAQM 885

Query:   543 SKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGA-YPEQWLPENGTHFV------ 595
             SKAPIQ+ AD  +  FVP ++ ++  T + W   G +     +++ P    H        
Sbjct:   886 SKAPIQQLADKFSGYFVPFIIIISTVTLIAWITIGFINFDIIQKYFPNQNKHLSKAELIL 945

Query:   596 -FALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDK 654
              FA   SI+V+ IACPC+LGLATPTAVMV TGV A NG+LIKGG  LE A KIK V+FDK
Sbjct:   946 RFAFQTSITVLSIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDK 1005

Query:   655 TGTLTQGRATVTTAKVF---TKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDP 711
             TGT+T G   V    +      +   + L +V +AEASSEHPL  AV +Y          
Sbjct:  1006 TGTITCGVPKVMRVLLLGDTAVLSLKKVLAVVGTAEASSEHPLGVAVTKYC--------- 1056

Query:   712 SLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDH 771
                       KE  G+  L   ++F A+PG GI C + G   ++G      E G+  P  
Sbjct:  1057 ----------KEELGTQSLGYCTNFQAVPGCGISCKVGGVDAVLGTA----EEGVDNPRA 1102

Query:   772 VESFV 776
              ES V
Sbjct:  1103 HESTV 1107

GO:0016021 "integral to membrane" evidence=IEA

GO:0004008 "copper-exporting ATPase activity" evidence=IEA

GO:0005507 "copper ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005770 "late endosome" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=IEA

GO:0006878 "cellular copper ion homeostasis" evidence=IEA

GO:0006882 "cellular zinc ion homeostasis" evidence=IEA

GO:0007595 "lactation" evidence=IEA

GO:0015677 "copper ion import" evidence=IEA

GO:0015680 "intracellular copper ion transport" evidence=IEA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=IEA

GO:0046688 "response to copper ion" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0051208 "sequestering of calcium ion" evidence=IEA

UNIPROTKB|E1C2H7 ATP7B "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 939 (335.6 bits), Expect = 1.8e-132, Sum P(3) = 1.8e-132
 Identities = 250/693 (36%), Positives = 366/693 (52%)

Query:   134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
             I GMTCA+CV+++E  L+   G+   +VAL     E++Y P  I   +IA  I++ GFEA
Sbjct:   448 ITGMTCASCVSTIERNLQKEDGIISVLVALMAGKAEIKYKPEFIQPLEIAQLIQNLGFEA 507

Query:   194 SFVQ--SSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEAL 251
             + ++  S  +  + L +TG+ C    H +E  L    G+        + +  + FDPE  
Sbjct:   508 TVIEDHSEAEGNVELLITGMTCASCVHNIESKLMRTNGIFYASVALATCKAHIQFDPEIT 567

Query:   252 SSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNMFRL-FISSLFLSIPVFFIRV- 309
               R ++  I     G F   V        + D ++    +R  F+ SL   IPV  + + 
Sbjct:   568 GPRDIIKII--EEMG-FHASVSRRVPNTHNLDHKKEIQQWRKSFLCSLVFGIPVLILMIY 624

Query:   310 -ICPHIPLVYALLLWR-CGPFL-MGDWLNWALVSVVQ--FVIGKRFYTAAGRALRNGSTN 364
              + P      A++L +   P L + + L + L + VQ  F+ G  FY  A ++L++ + N
Sbjct:   625 MLIPGGEHHGAMVLEQNLIPGLSILNLLFFVLCTFVQQQFLGGWYFYIQAYKSLKHKAAN 684

Query:   365 MDVLVALGTSAAYFYSVGALLYGVVT-GFWSP-TYFETSAMLITFVLFGKYLEILAKGKT 422
             MDVL+ L T+ AY YS   LL  ++     SP T+F+T  ML  F+  G++LE +AK KT
Sbjct:   685 MDVLIVLATTIAYVYSCVILLVAIIEKAEKSPVTFFDTPPMLFVFIALGRWLEHIAKSKT 744

Query:   423 SDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWG 482
             S+A+ KL+ L    A +V        I E ++   L+Q GD +KV+PG K P DG V+ G
Sbjct:   745 SEALAKLISLQATEATVVTLGPDHSIIREEQVPVELVQRGDIVKVVPGGKFPVDGKVIEG 804

Query:   483 TSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQM 542
              S  +ES++TGEA+PV K+  S VI G+IN HG + + AT VG+D  L+QI+ LVE AQM
Sbjct:   805 NSMADESLITGEAMPVTKKPGSTVIAGSINAHGSVLVNATHVGNDTTLAQIVKLVEEAQM 864

Query:   543 SKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGA-YPEQWLPENGTHFV------ 595
             SKAPIQ+ AD  +  FVP ++ ++  T + W   G +     +++ P    H        
Sbjct:   865 SKAPIQQLADKFSGYFVPFIIIISTVTLIAWITIGFINFDIIQKYFPNQNKHLSKAELIL 924

Query:   596 -FALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDK 654
              FA   SI+V+ IACPC+LGLATPTAVMV TGV A NG+LIKGG  LE A KIK V+FDK
Sbjct:   925 RFAFQTSITVLSIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDK 984

Query:   655 TGTLTQGRATVTTAKVF---TKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDP 711
             TGT+T G   V    +      +   + L +V +AEASSEHPL  AV +Y          
Sbjct:   985 TGTITCGVPKVMRVLLLGDTAVLSLKKVLAVVGTAEASSEHPLGVAVTKYC--------- 1035

Query:   712 SLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRK---------LLN 762
                       KE  G+  L   ++F A+PG GI C + G   ++G  +         LL+
Sbjct:  1036 ----------KEELGTQSLGYCTNFQAVPGCGISCKVGGVDAVLGTAEEGVDKFPIILLS 1085

Query:   763 ESGITIPDHVESFVVELEE-SARTGILVAYDDN 794
                 +   H+ S ++   E   R G+ +A D N
Sbjct:  1086 IHKGSSSSHIYSVLIGNREWMRRNGLHIANDVN 1118

GO:0005507 "copper ion binding" evidence=IEA

GO:0006825 "copper ion transport" evidence=IEA

GO:0019829 "cation-transporting ATPase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|2179 Atp7a "ATPase, Cu++ transporting, alpha polypeptide" [Rattus norvegicus (taxid:10116)]

 Score = 845 (302.5 bits), Expect = 4.7e-131, Sum P(4) = 4.7e-131
 Identities = 199/478 (41%), Positives = 284/478 (59%)

Query:   334 LNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVT-GF 392
             L+  L   VQF  G  FY  A +ALR+ + NMDVL+ L T+ A+ YS+  LL  +     
Sbjct:   707 LSLLLCLPVQFCGGWYFYIQAYKALRHKTANMDVLIVLATTIAFAYSLVILLVAMYERAK 766

Query:   393 WSP-TYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEE 451
              +P T+F+T  ML  F+  G++LE +AKGKTS+A+ KL+ L    A +V  +     + E
Sbjct:   767 VNPITFFDTPPMLFVFIALGRWLEHIAKGKTSEALAKLISLQATEATIVTLNSENLLLSE 826

Query:   452 REIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTI 511
              ++D  L+Q GD +KV+PG K P DG V+ G S V+ES++TGEA+PV K+  S VI G+I
Sbjct:   827 EQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHSMVDESLITGEAMPVAKKPGSTVIAGSI 886

Query:   512 NLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWL 571
             N +G L I+AT VG+D  LSQI+ LVE AQ SKAPIQ+FAD ++  FVP +V +++ T L
Sbjct:   887 NQNGSLLIRATHVGADTTLSQIVKLVEEAQTSKAPIQQFADKLSGYFVPFIVLVSIVTLL 946

Query:   572 CWYVAG-----VLGAY-P--EQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMV 623
              W + G     ++ AY P   + +    T   FA   SI+V+ IACPC+LGLATPTAVMV
Sbjct:   947 VWIIIGFQNFEIVEAYFPGYNRSISRTETIIRFAFQASITVLCIACPCSLGLATPTAVMV 1006

Query:   624 ATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFT---KMDRGEFL 680
              TGVGA NG+LIKGG+ LE A K+K V+FDKTGT+T G   V   KV     K+ R + L
Sbjct:  1007 GTGVGAQNGILIKGGEPLEMAHKVKVVVFDKTGTITHGTPVVNQVKVLVESNKISRNKIL 1066

Query:   681 TLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALP 740
              +V +AE++SEHPL  AV +Y +              Q    E+ G+      +DF  +P
Sbjct:  1067 AIVGTAESNSEHPLGAAVTKYCK--------------QELDTETLGT-----CTDFQVVP 1107

Query:   741 GRGIQCFISGKQVLVGNRKL-LNESGITIPDHVESFVVELEESARTGILV-AYDDNLI 796
             G GI C ++  + L+    L + E+ I     V+   +  + S  + +++ A+  N +
Sbjct:  1108 GCGISCKVTNIEGLLHKSNLKIEENNIKNASLVQIDAINEQSSPSSSMIIDAHLSNAV 1165

GO:0001568 "blood vessel development" evidence=IEA;ISO

GO:0001701 "in utero embryonic development" evidence=IEP

GO:0001836 "release of cytochrome c from mitochondria" evidence=IEA;ISO

GO:0001974 "blood vessel remodeling" evidence=IEA;ISO

GO:0002082 "regulation of oxidative phosphorylation" evidence=IEA;ISO

GO:0003674 "molecular_function" evidence=ND

GO:0004008 "copper-exporting ATPase activity" evidence=IEA;ISO

GO:0005375 "copper ion transmembrane transporter activity" evidence=ISO

GO:0005507 "copper ion binding" evidence=ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005770 "late endosome" evidence=IEA;ISO

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=ISO;IDA

GO:0005802 "trans-Golgi network" evidence=ISO;IDA

GO:0005886 "plasma membrane" evidence=ISO

GO:0006200 "ATP catabolic process" evidence=ISO

GO:0006568 "tryptophan metabolic process" evidence=IEA;ISO

GO:0006570 "tyrosine metabolic process" evidence=IEA;ISO

GO:0006584 "catecholamine metabolic process" evidence=ISO

GO:0006825 "copper ion transport" evidence=ISO

GO:0006878 "cellular copper ion homeostasis" evidence=IEA;ISO

GO:0007005 "mitochondrion organization" evidence=ISO

GO:0007595 "lactation" evidence=IEP

GO:0007626 "locomotory behavior" evidence=IEA;ISO

GO:0010041 "response to iron(III) ion" evidence=IEP

GO:0010043 "response to zinc ion" evidence=IEP

GO:0010273 "detoxification of copper ion" evidence=IEA;ISO

GO:0010468 "regulation of gene expression" evidence=IEA;ISO

GO:0015677 "copper ion import" evidence=IEA;ISO

GO:0016020 "membrane" evidence=ISO

GO:0016021 "integral to membrane" evidence=IDA

GO:0016323 "basolateral plasma membrane" evidence=ISO;IDA

GO:0016532 "superoxide dismutase copper chaperone activity" evidence=IEA;ISO

GO:0018205 "peptidyl-lysine modification" evidence=IEA;ISO

GO:0019430 "removal of superoxide radicals" evidence=IEA;ISO

GO:0021702 "cerebellar Purkinje cell differentiation" evidence=IEA;ISO

GO:0021860 "pyramidal neuron development" evidence=IEA;ISO

GO:0021954 "central nervous system neuron development" evidence=ISO

GO:0030140 "trans-Golgi network transport vesicle" evidence=IEA;ISO

GO:0030141 "secretory granule" evidence=IDA

GO:0030198 "extracellular matrix organization" evidence=ISO

GO:0030199 "collagen fibril organization" evidence=IEA;ISO

GO:0031069 "hair follicle morphogenesis" evidence=IEA;ISO

GO:0031410 "cytoplasmic vesicle" evidence=ISO

GO:0031526 "brush border membrane" evidence=IDA

GO:0032767 "copper-dependent protein binding" evidence=IEA;ISO

GO:0035137 "hindlimb morphogenesis" evidence=ISO

GO:0042093 "T-helper cell differentiation" evidence=IEA;ISO

GO:0042414 "epinephrine metabolic process" evidence=IEA;ISO

GO:0042415 "norepinephrine metabolic process" evidence=ISO

GO:0042417 "dopamine metabolic process" evidence=IEA;ISO

GO:0042421 "norepinephrine biosynthetic process" evidence=IEA;ISO

GO:0042428 "serotonin metabolic process" evidence=IEA;ISO

GO:0043005 "neuron projection" evidence=IEA;ISO

GO:0043025 "neuronal cell body" evidence=IEA;ISO

GO:0043085 "positive regulation of catalytic activity" evidence=ISO

GO:0043473 "pigmentation" evidence=IEA;ISO

GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA;ISO

GO:0043588 "skin development" evidence=IEA;ISO

GO:0046034 "ATP metabolic process" evidence=ISO

GO:0046688 "response to copper ion" evidence=IDA

GO:0048251 "elastic fiber assembly" evidence=IEA;ISO

GO:0048286 "lung alveolus development" evidence=IEA;ISO

GO:0048471 "perinuclear region of cytoplasm" evidence=ISO;IDA

GO:0048553 "negative regulation of metalloenzyme activity" evidence=IEA;ISO

GO:0048554 "positive regulation of metalloenzyme activity" evidence=IEA;ISO

GO:0048812 "neuron projection morphogenesis" evidence=ISO

GO:0048813 "dendrite morphogenesis" evidence=IEA;ISO

GO:0051216 "cartilage development" evidence=IEA;ISO

GO:0051353 "positive regulation of oxidoreductase activity" evidence=IEA;ISO

GO:0051542 "elastin biosynthetic process" evidence=IEA;ISO

GO:0060003 "copper ion export" evidence=ISO

DICTYBASE|DDB_G0284141 atp7a "copper-transporting ATPase" [Dictyostelium discoideum (taxid:44689)]

 Score = 822 (294.4 bits), Expect = 1.3e-130, Sum P(2) = 1.3e-130
 Identities = 185/360 (51%), Positives = 235/360 (65%)

Query:   396 TYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDK----------- 444
             T+F+TSA LITF+L GKYLE++AKGKTS+AIKKL+ L    ALL+  D+           
Sbjct:   299 TFFDTSASLITFILLGKYLEVIAKGKTSEAIKKLMGLQATKALLLTIDQNEGGGGGGGSD 358

Query:   445 ---VGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKE 501
                    +EEREID  L+Q GD LKVLPG+K+P DGIVV G S+++ES++TGE++PV K+
Sbjct:   359 NKTTTTILEEREIDIDLVQRGDYLKVLPGSKVPTDGIVVSGLSHIDESIITGESLPVSKK 418

Query:   502 INSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPI 561
                 +IGGT+N  GVL ++AT++G +  LSQII LVE AQ  +APIQ  AD V+  FVP 
Sbjct:   419 SGDKLIGGTLNQKGVLVMKATRIGGETSLSQIIKLVEKAQTERAPIQSLADKVSGYFVPS 478

Query:   562 VVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAV 621
             V+TL L T++ W +AG  G   +     N + F FAL  +ISV+VIACPCALGLATPTAV
Sbjct:   479 VITLGLLTFIVWLIAGSSGVASDYIKASNSSVFQFALRNAISVIVIACPCALGLATPTAV 538

Query:   622 MVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFT--------- 672
             MV TG+GA NG+LIKGG  LE A KI  +IFDKTGTLT G+  V+   +F          
Sbjct:   539 MVGTGIGAQNGILIKGGSHLETAHKISAIIFDKTGTLTTGKPIVSNVNIFGNLNNNNNGN 598

Query:   673 ----KMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSG 728
                 K+++  F  +VASAEA+SEHPLA A+V YA  F   D  S  P     S   TGSG
Sbjct:   599 NNSGKINKKTFFQMVASAEAASEHPLAGAIVNYA--FEVCDVQSTTPPLSFES--ITGSG 654

GO:0046872 "metal ion binding" evidence=IEA

GO:0030001 "metal ion transport" evidence=IEA

GO:0019829 "cation-transporting ATPase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006825 "copper ion transport" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0005507 "copper ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9S7J8	HMA7_ARATH	3, ., 6, ., 3, ., 4	0.7508	0.9905	0.8361	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.6.3	0.976
3rd Layer	3.6.3.4	0.991

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_290004 SubName- Full=Putative uncharacterized protein; (1010 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	845
TIGR01511	572	TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans	0.0
COG2217	713	COG2217, ZntA, Cation transport ATPase [Inorganic	0.0
TIGR01525	556	TIGR01525, ATPase-IB_hvy, heavy metal translocatin	1e-134
PRK10671	834	PRK10671, copA, copper exporting ATPase; Provision	1e-99
TIGR01512	536	TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb	2e-95
TIGR01494	543	TIGR01494, ATPase_P-type, ATPase, P-type (transpor	1e-68
PRK11033	741	PRK11033, zntA, zinc/cadmium/mercury/lead-transpor	1e-62
pfam00122	222	pfam00122, E1-E2_ATPase, E1-E2 ATPase	5e-58
COG0474	917	COG0474, MgtA, Cation transport ATPase [Inorganic	5e-30
PRK14010	673	PRK14010, PRK14010, potassium-transporting ATPase	8e-30
COG2216	681	COG2216, KdpB, High-affinity K+ transport system,	6e-29
TIGR01497	675	TIGR01497, kdpB, K+-transporting ATPase, B subunit	2e-27
PRK01122	679	PRK01122, PRK01122, potassium-transporting ATPase	2e-25
cd00371	63	cd00371, HMA, Heavy-metal-associated domain (HMA)	2e-17
cd00371	63	cd00371, HMA, Heavy-metal-associated domain (HMA)	4e-16
COG2608	71	COG2608, CopZ, Copper chaperone [Inorganic ion tra	9e-15
COG2608	71	COG2608, CopZ, Copper chaperone [Inorganic ion tra	1e-13
pfam00403	62	pfam00403, HMA, Heavy-metal-associated domain	2e-13
pfam00403	62	pfam00403, HMA, Heavy-metal-associated domain	5e-13
TIGR01517	944	TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-	2e-12
TIGR01647	754	TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e	6e-12
COG2217	713	COG2217, ZntA, Cation transport ATPase [Inorganic	2e-10
TIGR00003	66	TIGR00003, TIGR00003, copper ion binding protein	4e-10
COG2217	713	COG2217, ZntA, Cation transport ATPase [Inorganic	5e-10
PRK10671	834	PRK10671, copA, copper exporting ATPase; Provision	3e-09
TIGR01657	1054	TIGR01657, P-ATPase-V, P-type ATPase of unknown pu	6e-09
TIGR01106	997	TIGR01106, ATPase-IIC_X-K, sodium or proton efflux	2e-08
TIGR01522	884	TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-	9e-08
PRK13748	561	PRK13748, PRK13748, putative mercuric reductase; P	1e-07
TIGR00003	66	TIGR00003, TIGR00003, copper ion binding protein	5e-07
TIGR02052	92	TIGR02052, MerP, mercuric transport protein peripl	3e-06
TIGR02052	92	TIGR02052, MerP, mercuric transport protein peripl	4e-06
pfam00702	187	pfam00702, Hydrolase, haloacid dehalogenase-like h	8e-06
PRK10671	834	PRK10671, copA, copper exporting ATPase; Provision	1e-05
PRK13748	561	PRK13748, PRK13748, putative mercuric reductase; P	2e-05
TIGR01116	917	TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic	2e-05
TIGR01524	867	TIGR01524, ATPase-IIIB_Mg, magnesium-translocating	3e-05
PRK11033	741	PRK11033, zntA, zinc/cadmium/mercury/lead-transpor	2e-04
TIGR01523	1053	TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu	4e-04
PRK11033	741	PRK11033, zntA, zinc/cadmium/mercury/lead-transpor	6e-04
PLN02957	238	PLN02957, PLN02957, copper, zinc superoxide dismut	7e-04
TIGR01517	944	TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-	8e-04

>gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase

 Score =  568 bits (1466), Expect = 0.0
 Identities = 239/497 (48%), Positives = 316/497 (63%), Gaps = 47/497 (9%)

Query: 346 IGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVV-TGFWSPTYFETSAML 404
            G+ FY +A +ALR+ + NMD L+ALGT+ AY YS+ ALL   V TG    T+F+ SAML
Sbjct: 1   AGRPFYKSAWKALRHKTPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAML 60

Query: 405 ITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDT 464
           ITF+L G++LE+LAKG+ SDA+ KL +L P+TA L+  D      E  E+   L+Q GD 
Sbjct: 61  ITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTDDG-----EIEEVPVELLQPGDI 115

Query: 465 LKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKV 524
           ++VLPG K+P DG V+ G S V+ES+VTGE++PV K++  PVI GT+N  G L ++AT  
Sbjct: 116 VRVLPGEKIPVDGTVIEGESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATAT 175

Query: 525 GSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPE 584
           G D  L+QI+ LV  AQ SKAPIQ+ AD VA  FVP+V+ +AL T++ W + G       
Sbjct: 176 GEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWLILG------- 228

Query: 585 QWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERA 644
                    FVFAL  +++V++IACPCALGLATPT + VATG+ A NGVLIK GDALERA
Sbjct: 229 -------ADFVFALEVAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERA 281

Query: 645 QKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARH 704
             I  V+FDKTGTLTQG+ TVT   VF + DR E L L A+ EA SEHPLAKA+V YA+ 
Sbjct: 282 ANIDTVVFDKTGTLTQGKPTVTDVHVFGESDRDELLALAAALEAGSEHPLAKAIVSYAKA 341

Query: 705 FHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNES 764
                                    L  VSDF A+PG G++  + G  + +GN KLL E+
Sbjct: 342 KGIT---------------------LSQVSDFKAIPGIGVEGTVEGHTIQLGNEKLLGEN 380

Query: 765 GITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPV 824
           G+     VE      E    T +LVA +  L GV+ +AD +K EA  V++ L + G+ PV
Sbjct: 381 GLKTDGEVE------EGGGTTSVLVAVNGELAGVLALADQLKPEAKEVIQALKRRGIEPV 434

Query: 825 MVTGDNWRTAHAVAREV 841
           M+TGDN +TA AVA+E+
Sbjct: 435 MLTGDNRKTAKAVAKEL 451

This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572

>gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism]

 Score =  556 bits (1436), Expect = 0.0
 Identities = 248/639 (38%), Positives = 351/639 (54%), Gaps = 67/639 (10%)

Query: 203 KILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAG 262
           +  L V G+ C   A  +E  L+   GV + R +  +    V++DPE +   + +   A 
Sbjct: 3   ETSLSVEGMTCAACASRIEA-LNKLPGVEEARVNLATERATVVYDPEEVDLPADIVA-AV 60

Query: 263 RSNGKFQIRVMNPFARMTSRDSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLL 322
              G +  R+    A     ++     + R  I +  L++P+  + +             
Sbjct: 61  EKAG-YSARLTAALADPAEAEARLLRELLRRLIIAGLLTLPLLLLSLGLL---------- 109

Query: 323 WRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVG 382
                  +  W+++ L + V F  G  FY  A RALR G  NMD LVAL T  AY YS+ 
Sbjct: 110 ---LGAFLLPWVSFLLATPVLFYGGWPFYRGAWRALRRGRLNMDTLVALATIGAYAYSLY 166

Query: 383 ALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVK 442
           A L+ V        YFE +AMLI   L G+YLE  AKG+   AI+ L++LAP TA +V  
Sbjct: 167 ATLFPV--------YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRG 218

Query: 443 DKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEI 502
           D      EE E+    +Q GD + V PG ++P DG+VV G+S V+ESM+TGE++PV K+ 
Sbjct: 219 DG-----EEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSSVDESMLTGESLPVEKKP 273

Query: 503 NSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIV 562
              V  GT+NL G L I+ T+VG+D  L++II LVE AQ SKAPIQ+ AD VAS FVP+V
Sbjct: 274 GDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVV 333

Query: 563 VTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVM 622
           + +A  T+  W + G             G  +  AL  +++V+VIACPCALGLATPTA++
Sbjct: 334 LVIAALTFALWPLFG-------------GGDWETALYRALAVLVIACPCALGLATPTAIL 380

Query: 623 VATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTL 682
           V  G  A  G+LIKGG+ALER  K+  V+FDKTGTLT+G+  VT        D  E L L
Sbjct: 381 VGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG-DEDELLAL 439

Query: 683 VASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGR 742
            A+ E  SEHPLAKA+V+ A                           L DV DF  +PGR
Sbjct: 440 AAALEQHSEHPLAKAIVKAAAERG-----------------------LPDVEDFEEIPGR 476

Query: 743 GIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIA 802
           G++  + G++VLVGN +LL E GI +P  +   +  LE   +T + VA D  L+GV+ +A
Sbjct: 477 GVEAEVDGERVLVGNARLLGEEGIDLP-LLSERIEALESEGKTVVFVAVDGKLVGVIALA 535

Query: 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREV 841
           D ++ +A   +  L  +G++ VM+TGDN RTA A+A+E+
Sbjct: 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKEL 574

Length = 713

>gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase

 Score =  410 bits (1056), Expect = e-134
 Identities = 187/481 (38%), Positives = 263/481 (54%), Gaps = 63/481 (13%)

Query: 365 MDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSD 424
           MD+L+AL T AAY   +                    A+L+   L G+ LE  AKG+ SD
Sbjct: 1   MDLLMALATIAAYAMGL----------------VLEGALLLFLFLLGETLEERAKGRASD 44

Query: 425 AIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTS 484
           A+  L+ LAP+TA ++  D       E E+    +Q GD + V PG ++P DG+V+ G S
Sbjct: 45  ALSALLALAPSTARVLQGDG-----SEEEVPVEELQVGDIVIVRPGERIPVDGVVISGES 99

Query: 485 YVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSK 544
            V+ES +TGE++PV K+    V  GTIN  G L I+ TK+G D+ L+QI+ LVE AQ SK
Sbjct: 100 EVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEAQSSK 159

Query: 545 APIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISV 604
           APIQ+ AD +AS +VP V+ +AL T++ W   G LG                AL  +++V
Sbjct: 160 APIQRLADRIASYYVPAVLAIALLTFVVWLALGALG----------------ALYRALAV 203

Query: 605 VVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRAT 664
           +V+ACPCALGLATP A++VA GV A  G+LIKGGDALE+  K+K V+FDKTGTLT G+ T
Sbjct: 204 LVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPT 263

Query: 665 VTTAKVFTKMDRG--EFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSK 722
           V   +          E L L A+ E SS HPLA+A+V YA+            +      
Sbjct: 264 VVDIEPLDDASISEEELLALAAALEQSSSHPLARAIVRYAKKRGL---ELPKQE------ 314

Query: 723 ESTGSGWLLDVSDFSALPGRGIQCFISG-KQVLVGNRKLLNESGITIPDHVESFVVELEE 781
                       D   +PG+G++  + G ++V +GN + L E  I         + E E 
Sbjct: 315 ------------DVEEVPGKGVEATVDGGEEVRIGNPRFL-ELAIEPISASPDLLNEGES 361

Query: 782 SARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGV-RPVMVTGDNWRTAHAVARE 840
             +T + VA D  L+GV+ + D ++ EA   +  L + G  + VM+TGDN   A AVA E
Sbjct: 362 QGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAE 421

Query: 841 V 841
           +
Sbjct: 422 L 422

This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556

>gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional

 Score =  328 bits (843), Expect = e-99
 Identities = 225/759 (29%), Positives = 355/759 (46%), Gaps = 131/759 (17%)

Query: 133 TIGGMTCAACVNSVEGILRGLPGVKRAVV--------------ALATSLGEVEYDPTVIS 178
           T+ G++C  CV  V+  L   P V++A V              AL  ++ +  YD +V  
Sbjct: 8   TLDGLSCGHCVKRVKESLEQRPDVEQADVSITEAHVTGTASAEALIETIKQAGYDASVSH 67

Query: 179 --------KDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGV 230
                       + A+  A  E     +   D   L ++G+ C      ++  L +  GV
Sbjct: 68  PKAKPLTESSIPSEALTAASEELPAATADDDDSQQLLLSGMSCASCVSRVQNALQSVPGV 127

Query: 231 RQFRFDKISGELEVLFDPEALSSRS-LVDG-------IAGRSNGKFQIRVMNPFARMTSR 282
            Q R +              L+ R+ LV G       +       +    +   A+   R
Sbjct: 128 TQARVN--------------LAERTALVMGSASPQDLVQAVEKAGYGAEAIEDDAKRRER 173

Query: 283 DSEETSNMFRLF----ISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGD------ 332
             E      + F    I +L + IPV                ++W     ++GD      
Sbjct: 174 QQETAQATMKRFRWQAIVALAVGIPV----------------MVWG----MIGDNMMVTA 213

Query: 333 -----WLNWALVSV-VQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLY 386
                WL   L+++ V    G  FY +A ++L NGS  MD LVALGT AA+ YS+   L+
Sbjct: 214 DNRSLWLVIGLITLAVMVFAGGHFYRSAWKSLLNGSATMDTLVALGTGAAWLYSMSVNLW 273

Query: 387 GVVTGFWSPT-----YFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVV 441
                 W P      Y+E SAM+I  +  G  LE  A+ ++S A++KL++L P TA +V 
Sbjct: 274 PQ----WFPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVT 329

Query: 442 KDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKE 501
            +       E+ +    +Q G  L++  G ++P DG +  G ++++E+M+TGE +P  K 
Sbjct: 330 DEG------EKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQKG 383

Query: 502 INSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPI 561
               V  GT+   G +  +A+ VGS   LS+II +V  AQ SK  I + AD ++++FVP+
Sbjct: 384 EGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPV 443

Query: 562 VVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAV 621
           VV +AL +   WY  G          P      V+ L+ + +V++IACPCALGLATP ++
Sbjct: 444 VVVIALVSAAIWYFFG----------PA--PQIVYTLVIATTVLIIACPCALGLATPMSI 491

Query: 622 MVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLT 681
           +   G  A  GVL++  DAL+RA  +  ++FDKTGTLT+G+  V   K F  +D  + L 
Sbjct: 492 ISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGVDEAQALR 551

Query: 682 LVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPG 741
           L A+ E  S HPLA+A+++ A                       G   L  V+ F  L G
Sbjct: 552 LAAALEQGSSHPLARAILDKA-----------------------GDMTLPQVNGFRTLRG 588

Query: 742 RGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGI 801
            G+     G  +L+GN+ LLNE  +     +E+ +        T +L+A D     ++ I
Sbjct: 589 LGVSGEAEGHALLLGNQALLNEQQVDT-KALEAEITAQASQGATPVLLAVDGKAAALLAI 647

Query: 802 ADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVARE 840
            DP++ ++   ++ L K G R VM+TGDN  TA+A+A+E
Sbjct: 648 RDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKE 686

Length = 834

>gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

 Score =  308 bits (792), Expect = 2e-95
 Identities = 157/446 (35%), Positives = 231/446 (51%), Gaps = 64/446 (14%)

Query: 397 YFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDA 456
           Y E  A+L+     G+ LE  A G+   A+K L+ELAP TA ++            E+  
Sbjct: 18  YLE-GALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGG------SLEEVAV 70

Query: 457 LLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGV 516
             ++ GD + V PG ++P DG+V+ GTS V+ES +TGE+VPV K     V  G INL GV
Sbjct: 71  EELKVGDVVVVKPGERVPVDGVVLSGTSTVDESALTGESVPVEKAPGDEVFAGAINLDGV 130

Query: 517 LHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVA 576
           L I  TK+ +D+ +++I++LVE AQ  KA  Q+F D  A  + P+V+ +AL  WL   V 
Sbjct: 131 LTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWL---VP 187

Query: 577 GVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIK 636
           G+L  +P            F +  ++ ++V+A PCAL ++ P A + A    A +G+LIK
Sbjct: 188 GLLKRWP------------FWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIK 235

Query: 637 GGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAK 696
           GG ALE   KIK V FDKTGTLT GR  V            E L L A+AE +S HPLA+
Sbjct: 236 GGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA------EVLRLAAAAEQASSHPLAR 289

Query: 697 AVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVG 756
           A+V+YAR                            +V     +PG G++  + G +V +G
Sbjct: 290 AIVDYARK-------------------------RENVESVEEVPGEGVRAVVDGGEVRIG 324

Query: 757 NRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGL 816
           N + L  +    P          E + +T + VA D   +G + ++D  + +AA  +  L
Sbjct: 325 NPRSLEAAVGARP----------ESAGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAEL 374

Query: 817 LKMGV-RPVMVTGDNWRTAHAVAREV 841
             +G+ + VM+TGD    A  VARE+
Sbjct: 375 KALGIEKVVMLTGDRRAVAERVAREL 400

This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536

>gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC

 Score =  236 bits (605), Expect = 1e-68
 Identities = 115/463 (24%), Positives = 196/463 (42%), Gaps = 61/463 (13%)

Query: 403 MLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSG 462
            ++  VL    L +  K K  D ++ L +    T    V     K     EI A  +  G
Sbjct: 1   FILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNGWK-----EIPAKDLVPG 55

Query: 463 DTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEI----------NSPVIGGTIN 512
           D + V  G  +PADG+++ G+ +V+ES +TGE+ PVLK               V  GT  
Sbjct: 56  DVVLVKSGETVPADGVLLSGSCFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYV 115

Query: 513 LHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFAD-FVASIFVPIVVTLALFTWL 571
             G L +  T  G    + +I  +V+T   ++ P+Q   D     IF+  ++ LAL  +L
Sbjct: 116 FGGTLIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFIFILFLLLLALAVFL 175

Query: 572 CWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANN 631
             ++ G            +      AL+ ++ V+VI  P AL  A   A+ V     A  
Sbjct: 176 YLFIRGW-----------DPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKK 224

Query: 632 GVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSE 691
           G+L++  +ALE   K+ Y+  DKTGTLT+ + T+    +    +      +       S 
Sbjct: 225 GILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDNSSSLVACDNNYLSG 284

Query: 692 HPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGK 751
            P+ KA+++ A      D  +                 +LDV  FS++  + +   +   
Sbjct: 285 DPMEKALLKSAELVGKADKGNKEYK-------------ILDVFPFSSVL-KRMSVIVETP 330

Query: 752 Q-----VLVGNRKLLNESGITIPDHVESFVVELEESARTG---ILVAYDD-----NLIGV 798
                  + G  +        I +   ++  +  E AR G   +  A  +       +G+
Sbjct: 331 DGSDLLFVKGAPEF-------ILERCNNYEEKYLELARQGLRVLAFASKELEDDLEFLGL 383

Query: 799 MGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREV 841
           +   DP++ +A   +E L   G++ VM+TGDN  TA A+A+E+
Sbjct: 384 ITFEDPLRPDAKETIEELKAAGIKVVMITGDNVLTAKAIAKEL 426

The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543

>gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional

 Score =  224 bits (573), Expect = 1e-62
 Identities = 130/440 (29%), Positives = 222/440 (50%), Gaps = 46/440 (10%)

Query: 402 AMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQS 461
           AM++   L G+ LE  A  +    +  L+ L P TA  +      +  E  E+    ++ 
Sbjct: 210 AMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRL------RDGEREEVAIADLRP 263

Query: 462 GDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQA 521
           GD ++V  G +LPADG ++   +  +ES +TGE++PV +     V  G  ++  ++ ++ 
Sbjct: 264 GDVIEVAAGGRLPADGKLLSPFASFDESALTGESIPVERATGEKVPAGATSVDRLVTLEV 323

Query: 522 TKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGA 581
                 + + +I+ L+E A+  +API++F D  + I+ P ++ +AL   L   V  +L A
Sbjct: 324 LSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVIL---VPPLLFA 380

Query: 582 YP-EQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDA 640
            P ++W+    T           +++I CPCAL ++TP A+       A  G LIKGG A
Sbjct: 381 APWQEWIYRGLT-----------LLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAA 429

Query: 641 LERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVE 700
           LE+  ++  V FDKTGTLT+G+  VT     T +   E L L A+ E  S HPLA+A+V 
Sbjct: 430 LEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGISESELLALAAAVEQGSTHPLAQAIVR 489

Query: 701 YARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKL 760
            A+                  +       + +     AL G GI+  ++G++VL+     
Sbjct: 490 EAQ-----------------VRGLA----IPEAESQRALAGSGIEGQVNGERVLICAPGK 528

Query: 761 LNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMG 820
           L      + D     + ELE + +T +LV  +D+++G++ + D ++ +A   +  L  +G
Sbjct: 529 LPP----LADAFAGQINELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISELKALG 584

Query: 821 VRPVMVTGDNWRTAHAVARE 840
           ++ VM+TGDN R A A+A E
Sbjct: 585 IKGVMLTGDNPRAAAAIAGE 604

Length = 741

>gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase

 Score =  197 bits (503), Expect = 5e-58
 Identities = 88/241 (36%), Positives = 131/241 (54%), Gaps = 19/241 (7%)

Query: 403 MLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSG 462
           +++  VL    LE   + +   A+K L +L P TA  V++D      +E EI A  +  G
Sbjct: 1   IILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDG-----KEEEIPADELVVG 55

Query: 463 DTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQAT 522
           D + + PG ++PADG ++ G+  V+ES +TGE++PV K     V  GT+ L G L +  T
Sbjct: 56  DIVLLKPGDRVPADGRIIEGSLEVDESALTGESLPVEKSRGDTVFAGTVVLSGELKVIVT 115

Query: 523 KVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAY 582
             G D  L +I  LVE A+ +K P+Q+  D +A I VPIV+ LA+  +L W+        
Sbjct: 116 ATGEDTELGKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFLIWFF------- 168

Query: 583 PEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALE 642
                   G  F+ AL+ +++V+V ACP AL LA P A+ V  G  A  G+L+K   ALE
Sbjct: 169 -------RGGDFLEALLRALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALE 221

Query: 643 R 643
            
Sbjct: 222 T 222

Length = 222

>gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism]

 Score =  127 bits (321), Expect = 5e-30
 Identities = 102/524 (19%), Positives = 187/524 (35%), Gaps = 105/524 (20%)

Query: 389 VTGFWSPTYFET---SAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKV 445
             G W     +      +++   L G   E  A+ K  +A+KK+       +      + 
Sbjct: 95  FVGDWVDAGVDAIVILLVVVINALLGFVQEYRAE-KALEALKKMS------SPKAKVLRD 147

Query: 446 GKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGT-SYVNESMVTGEAVPVLK---- 500
           GK     EI A  +  GD + +  G  +PAD  ++  +   V+ES +TGE++PV K    
Sbjct: 148 GK---FVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQALP 204

Query: 501 ----------EINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKF 550
                     + ++ +  GT  + G         G +    +I  L+ T +  K P+Q+ 
Sbjct: 205 LTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRK 264

Query: 551 ADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACP 610
            + +    + + + L    ++     G  G                + + ++++ V A P
Sbjct: 265 LNKLGKFLLVLALVLGALVFVVGLFRGGNGLLE-------------SFLTALALAVAAVP 311

Query: 611 CALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVT---- 666
             L      A+ +     A +  +++  +A+E    +  +  DKTGTLTQ + TV     
Sbjct: 312 EGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYI 371

Query: 667 -------TAKVFTKMDRGEFLTLVASAEASSE----------HPLAKAVVEYAR-HFHFF 708
                    K            L A+   S             P   A+VE+A       
Sbjct: 372 NGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSL 431

Query: 709 DDPSLNPDGQSHSKESTGSGWLLDVSDFSA----------LPGRGIQCFISGK-QVLVGN 757
           D   L  +             +L    F +                  F+ G  +V++  
Sbjct: 432 DLSGLEVEYP-----------ILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILER 480

Query: 758 RKLLNESGITIPDHVESFVVELEESARTG---ILVAYDDN-----------------LIG 797
            K + E      + + +    ++E A  G   + VAY                     +G
Sbjct: 481 CKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLG 540

Query: 798 VMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREV 841
           + GI DP + +    +E L + G++  M+TGD+  TA A+A+E 
Sbjct: 541 LTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKEC 584

Length = 917

>gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional

 Score =  125 bits (316), Expect = 8e-30
 Identities = 117/463 (25%), Positives = 197/463 (42%), Gaps = 56/463 (12%)

Query: 394 SPTY-FETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEER 452
           S  Y F    +L+  ++F  + E LA+G+       L +         +K      +   
Sbjct: 61  SRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEM--- 117

Query: 453 EIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEIN---SPVIGG 509
            IDA  ++ G  ++V  G ++P DG V+ G + V+ES +TGE+ PV+KE       VIGG
Sbjct: 118 -IDASDLKKGHIVRVATGEQIPNDGKVIKGLATVDESAITGESAPVIKESGGDFDNVIGG 176

Query: 510 TINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFT 569
           T      L ++ T     + L ++I LVE A   K P +            I +   L T
Sbjct: 177 TSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNE------------IALFTLLMT 224

Query: 570 WLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGA 629
               ++  +L  YP         +F  ++   I++ V   P  +G      ++ A G+  
Sbjct: 225 LTIIFLVVILTMYPLAKF----LNFNLSIAMLIALAVCLIPTTIG-----GLLSAIGIAG 275

Query: 630 NN-----GVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLV- 683
            +      +L K G ++E    +  +I DKTGT+T G      A  F  +    F  LV 
Sbjct: 276 MDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGN---RMADAFIPVKSSSFERLVK 332

Query: 684 ASAEASSEH--PLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSD-FSALP 740
           A+ E+S     P  +++V+ A   H  D P    +    + E+  SG      + +   P
Sbjct: 333 AAYESSIADDTPEGRSIVKLAYKQHI-DLPQEVGEYIPFTAETRMSGVKFTTREVYKGAP 391

Query: 741 GRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMG 800
              +              K + E+G  IP  +++ V  + +   T ++V  D+ ++GV+ 
Sbjct: 392 NSMV--------------KRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLEDNEILGVIY 437

Query: 801 IADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCV 843
           + D +K         L +MG+  VM TGDN  TA  +A+E  V
Sbjct: 438 LKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV 480

Length = 673

>gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]

 Score =  123 bits (310), Expect = 6e-29
 Identities = 132/501 (26%), Positives = 220/501 (43%), Gaps = 72/501 (14%)

Query: 368 LVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKT---SD 424
           +V +G+    F ++   L+G   G        T  +  T VLF  + E +A+G+    +D
Sbjct: 37  VVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFT-VLFANFAEAVAEGRGKAQAD 95

Query: 425 AIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTS 484
           +++K        A L+  D          + A  ++ GD + V  G  +P+DG V+ G +
Sbjct: 96  SLRKTKT--ETIARLLRADG-----SIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA 148

Query: 485 YVNESMVTGEAVPVLKEIN---SPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQ 541
            V+ES +TGE+ PV++E     S V GGT  L   L I+ T    +  L ++I+LVE A+
Sbjct: 149 SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAE 208

Query: 542 MSKAPIQKFADFV-----ASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVF 596
             K P  + A  +       IF+  V TL  F                          ++
Sbjct: 209 RQKTP-NEIALTILLSGLTLIFLLAVATLYPFA-------------------------IY 242

Query: 597 ALMFSISVVV-IACPCALGLATPTAVMVATGVGANN-----GVLIKGGDALERAQKIKYV 650
           +   + SV V +A    L   T   ++ A G+   +      V+   G A+E A  +  +
Sbjct: 243 SGGGAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTL 302

Query: 651 IFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASS---EHPLAKAVVEYARHFHF 707
           + DKTGT+T G      A  F  +       L  +A+ +S   E P  +++VE A+    
Sbjct: 303 LLDKTGTITLGN---RQASEFIPVPGVSEEELADAAQLASLADETPEGRSIVELAKKLGI 359

Query: 708 ---FDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNES 764
               DD   + +    + ++  SG  +D+       GR I+     K  +   R+ + E 
Sbjct: 360 ELREDDLQSHAEFVPFTAQTRMSG--VDLPG-----GREIR-----KGAVDAIRRYVRER 407

Query: 765 GITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPV 824
           G  IP+ +++ V E+     T ++V  +  ++GV+ + D VK         L KMG++ V
Sbjct: 408 GGHIPEDLDAAVDEVSRLGGTPLVVVENGRILGVIYLKDIVKPGIKERFAELRKMGIKTV 467

Query: 825 MVTGDNWRTAHAVAREVCVID 845
           M+TGDN  TA A+A E  V D
Sbjct: 468 MITGDNPLTAAAIAAEAGVDD 488

Length = 681

>gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit

 Score =  118 bits (297), Expect = 2e-27
 Identities = 119/454 (26%), Positives = 196/454 (43%), Gaps = 45/454 (9%)

Query: 401 SAMLITFVLFGKYLEILAKGKT---SDAIKKLVELAPATALLVVKDKVGKCIEEREIDAL 457
           + +L   VLF  + E +A+G+    +D++K   +   A         +       ++ A 
Sbjct: 70  TGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAK-------LLRDDGAIDKVPAD 122

Query: 458 LIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINS---PVIGGTINLH 514
            ++ GD + V  G  +P DG V+ G + V+ES +TGE+ PV+KE       V GGT  L 
Sbjct: 123 QLKKGDIVLVEAGDVIPCDGEVIEGVASVDESAITGESAPVIKESGGDFASVTGGTRILS 182

Query: 515 GVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFT-WLCW 573
             L ++ T    +  L ++I+LVE AQ  K P  + A  +  I + +V  L   T W   
Sbjct: 183 DWLVVECTANPGETFLDRMIALVEGAQRRKTP-NEIALTILLIALTLVFLLVTATLWPFA 241

Query: 574 YVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGV 633
              G            + T  V  L+  I   +     A+G+A    V+     G N  V
Sbjct: 242 AYGGN---------AISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVL-----GFN--V 285

Query: 634 LIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHP 693
           +   G A+E    +  ++ DKTGT+T G    +       +D          A  + + P
Sbjct: 286 IATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGVDEKTLADAAQLASLADDTP 345

Query: 694 LAKAVVEYARHF--HFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGK 751
             K++V  A+       D  SL+      + ++  SG  LD        GR I+     K
Sbjct: 346 EGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD-------NGRMIR-----K 393

Query: 752 QVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAV 811
             +   ++ +  +G  IP  ++  V ++     T ++V  D+ + GV+ + D VK     
Sbjct: 394 GAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKE 453

Query: 812 VVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVID 845
               L KMG++ +M+TGDN  TA A+A E  V D
Sbjct: 454 RFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD 487

This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675

>gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional

 Score =  112 bits (282), Expect = 2e-25
 Identities = 138/522 (26%), Positives = 221/522 (42%), Gaps = 133/522 (25%)

Query: 381 VGALLYGVVTGFWSPTYFETSAM-----LITF-----VLFGKYLEILAKGKT---SDAIK 427
           VG++L  ++T    P  F++         IT      VLF  + E LA+G+    +D+++
Sbjct: 41  VGSILTTILTIA--PLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLR 98

Query: 428 KLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVN 487
              +     A  + +          E+ A  ++ GD + V  G  +PADG V+ G + V+
Sbjct: 99  GAKK--DTFARKLREPGA-----AEEVPATELRKGDIVLVEAGEIIPADGEVIEGVASVD 151

Query: 488 ESMVTGEAVPVLKEIN---SPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSK 544
           ES +TGE+ PV++E     S V GGT  L   + I+ T    ++ L ++I+LVE A+  K
Sbjct: 152 ESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQK 211

Query: 545 AP------IQKFADFVAS---IFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFV 595
            P      I      +A    IF+ +V TL  F     Y  G                  
Sbjct: 212 TPNEIALTI-----LLAGLTIIFLLVVATLPPFA---AYSGG------------------ 245

Query: 596 FALMFSISVVV-IACPCALGLATPTAVMVATG-------VGANNGVLIKGGDALERAQKI 647
                ++S+ V +A    L   T   ++ A G       + AN  V+   G A+E A  +
Sbjct: 246 -----ALSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQAN--VIATSGRAVEAAGDV 298

Query: 648 KYVIFDKTGTLTQG--RATVTTAKVFTKMDRGEFL--------TLVASAEASS---EHPL 694
             ++ DKTGT+T G  +A+             EFL         L  +A+ SS   E P 
Sbjct: 299 DTLLLDKTGTITLGNRQAS-------------EFLPVPGVTEEELADAAQLSSLADETPE 345

Query: 695 AKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSA--------LPGRGIQC 746
            +++V  A+      +  L     +                FSA        L GR I+ 
Sbjct: 346 GRSIVVLAKQRFNLRERDLQSLHAT-------------FVPFSAQTRMSGVDLDGREIR- 391

Query: 747 FISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVK 806
               K  +   R+ +  +G   P  +++ V E+     T ++VA D+ ++GV+ + D VK
Sbjct: 392 ----KGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAEDNRVLGVIYLKDIVK 447

Query: 807 ---REAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVID 845
              +E       L KMG++ VM+TGDN  TA A+A E  V D
Sbjct: 448 PGIKER---FAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD 486

Length = 679

>gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

 Score = 76.5 bits (189), Expect = 2e-17
 Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
           + ++ GMTCA CV+ +E  L  LPGV+   V L T    VEYDP V S +++  AIEDAG
Sbjct: 1   ELSVEGMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDPEV-SPEELLEAIEDAG 59

Query: 191 FEAS 194
           ++A 
Sbjct: 60  YKAR 63

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. Length = 63

>gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

 Score = 73.0 bits (180), Expect = 4e-16
 Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 52  VTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA 111
           V GMTCA C + +E AL  L GV    V L   KA V +DP+ V  E++  AIEDAG++A
Sbjct: 4   VEGMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDPE-VSPEELLEAIEDAGYKA 62

Query: 112 E 112
            
Sbjct: 63  R 63

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. Length = 63

>gnl|CDD|225328 COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism]

 Score = 69.3 bits (170), Expect = 9e-15
 Identities = 30/71 (42%), Positives = 39/71 (54%)

Query: 45  MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAI 104
           M +  + V GMTC  C  +VE AL  + GVA   V L +  A V FD + V  E I  AI
Sbjct: 1   MMKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAI 60

Query: 105 EDAGFEAEILA 115
           EDAG++ E + 
Sbjct: 61  EDAGYKVEEIK 71

Length = 71

>gnl|CDD|225328 COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism]

 Score = 66.3 bits (162), Expect = 1e-13
 Identities = 22/67 (32%), Positives = 32/67 (47%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
              + GMTC  CV +VE  L  + GV    V L      V +D   +  + I  AIEDAG
Sbjct: 5   TLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAIEDAG 64

Query: 191 FEASFVQ 197
           ++   ++
Sbjct: 65  YKVEEIK 71

Length = 71

>gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain

 Score = 65.3 bits (160), Expect = 2e-13
 Identities = 31/59 (52%), Positives = 36/59 (61%)

Query: 52  VTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFE 110
           V GMTCA C+  VE AL  L GV+  SV L   K  V  DPD +K E +K AIE AG+E
Sbjct: 4   VPGMTCAGCAKKVEKALSKLPGVSSVSVDLETGKVTVTGDPDPLKLEKLKKAIEKAGYE 62

Length = 62

>gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain

 Score = 64.2 bits (157), Expect = 5e-13
 Identities = 25/61 (40%), Positives = 30/61 (49%)

Query: 132 YTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGF 191
             + GMTCA C   VE  L  LPGV    V L T    V  DP  +  + +  AIE AG+
Sbjct: 2   LRVPGMTCAGCAKKVEKALSKLPGVSSVSVDLETGKVTVTGDPDPLKLEKLKKAIEKAGY 61

Query: 192 E 192
           E
Sbjct: 62  E 62

Length = 62

>gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase

 Score = 71.0 bits (174), Expect = 2e-12
 Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 5/224 (2%)

Query: 450 EEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYV-NESMVTGEAVPVLK--EINSPV 506
           +E++I    I  GD + +  G  +PADG+ + G S   +ES +TGE+ P+ K    +  +
Sbjct: 176 QEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGPVQDPFL 235

Query: 507 IGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLA 566
           + GT+   G   +  T VG ++   +++  +  A     P+Q+    +A +     +  A
Sbjct: 236 LSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLSELAGLIGKFGMGSA 295

Query: 567 LFTWLCWYVAGVLGAYPEQWL--PENGTHFVFALMFSISVVVIACPCALGLATPTAVMVA 624
           +  +L   +  V            E+   F+   + ++++VV+A P  L LA   A+  +
Sbjct: 296 VLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYS 355

Query: 625 TGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTA 668
                 +  L++   A E       +  DKTGTLTQ   +V   
Sbjct: 356 MKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQG 399

This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944

>gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase

 Score = 69.3 bits (170), Expect = 6e-12
 Identities = 88/414 (21%), Positives = 159/414 (38%), Gaps = 65/414 (15%)

Query: 453 EIDALLIQSGDTLKVLPGTKLPADGIVVWGTSY-VNESMVTGEAVPVLKEINSPVIGGTI 511
           EI A  +  GD +++  G  +PAD  +  G    V+++ +TGE++PV K+       G+ 
Sbjct: 104 EIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGST 163

Query: 512 NLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWL 571
              G      T  G +    +  +LV++ +     +QK    ++ I + ++V + +   +
Sbjct: 164 VKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKI---LSKIGLFLIVLIGVLVLI 220

Query: 572 CWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGA-- 629
              V               G  F   L F++ ++V   P A+    P  + V   VGA  
Sbjct: 221 ELVVL----------FFGRGESFREGLQFALVLLVGGIPIAM----PAVLSVTMAVGAAE 266

Query: 630 --NNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAE 687
                 ++    A+E    +  +  DKTGTLT  + ++     F      + + L A+  
Sbjct: 267 LAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFDKDDVLLYAALA 326

Query: 688 ASSEH--PLAKAVVEYAR------------HFHFFDDPSLNPDGQSHSKESTGSGWLLDV 733
           +  E    +  AV+  A+             F  FD            K +     + D 
Sbjct: 327 SREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFD---------PVDKRTE--ATVEDP 375

Query: 734 SDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDD 793
                  G+  +      QV++     L ++   I + VE  V EL       + VA  D
Sbjct: 376 ET-----GKRFKVTKGAPQVILD----LCDNKKEIEEKVEEKVDELASRGYRALGVARTD 426

Query: 794 -----NLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVC 842
                + +G++ + DP + +    +E    +GV   MVTGD      A+A+E  
Sbjct: 427 EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGD----HLAIAKETA 476

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754

>gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism]

 Score = 64.2 bits (157), Expect = 2e-10
 Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 2/65 (3%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISK-DDIANAIEDA 189
             ++ GMTCAAC + +E  L  LPGV+ A V LAT    V YDP  +    DI  A+E A
Sbjct: 5   SLSVEGMTCAACASRIEA-LNKLPGVEEARVNLATERATVVYDPEEVDLPADIVAAVEKA 63

Query: 190 GFEAS 194
           G+ A 
Sbjct: 64  GYSAR 68

Length = 713

>gnl|CDD|188014 TIGR00003, TIGR00003, copper ion binding protein

 Score = 56.0 bits (135), Expect = 4e-10
 Identities = 24/66 (36%), Positives = 35/66 (53%)

Query: 47  RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIED 106
           +    V GM+C  C + +E  +  ++GV+K  V L + K  V FD   V   +I  AI D
Sbjct: 1   KQTFQVKGMSCNHCVDKIEKFVGEIEGVSKVKVQLEKEKVVVEFDAPNVSATEICEAILD 60

Query: 107 AGFEAE 112
           AG+E E
Sbjct: 61  AGYEVE 66

This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases [Transport and binding proteins, Cations and iron carrying compounds]. Length = 66

>gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism]

 Score = 62.6 bits (153), Expect = 5e-10
 Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 45  MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKD-EDIKNA 103
           +R   + V GMTCAAC++ +E AL  L GV +A V L   +A VV+DP+ V    DI  A
Sbjct: 1   LRETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLPADIVAA 59

Query: 104 IEDAGFEAEI 113
           +E AG+ A +
Sbjct: 60  VEKAGYSARL 69

Length = 713

>gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional

 Score = 60.5 bits (147), Expect = 3e-09
 Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 27/163 (16%)

Query: 54  GMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113
           G++C  C   V+ +L     V +A V++   +A V         E +   I+ AG++A +
Sbjct: 11  GLSCGHCVKRVKESLEQRPDVEQADVSI--TEAHVTGTAS---AEALIETIKQAGYDASV 65

Query: 114 -------LAESSTS------------GPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLP 154
                  L ESS                        Q  + GM+CA+CV+ V+  L+ +P
Sbjct: 66  SHPKAKPLTESSIPSEALTAASEELPAATADDDDSQQLLLSGMSCASCVSRVQNALQSVP 125

Query: 155 GVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQ 197
           GV +A V LA     V       S  D+  A+E AG+ A  ++
Sbjct: 126 GVTQARVNLAERTALVMGSA---SPQDLVQAVEKAGYGAEAIE 165

Length = 834

>gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V)

 Score = 59.7 bits (145), Expect = 6e-09
 Identities = 56/236 (23%), Positives = 89/236 (37%), Gaps = 39/236 (16%)

Query: 450 EEREIDALLIQSGDTL--KVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKE------ 501
           +   I +  +  GD +         +P D +++ G+  VNESM+TGE+VPVLK       
Sbjct: 238 KWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGSCIVNESMLTGESVPVLKFPIPDNG 297

Query: 502 --INSPVIGGTINLHGVLHIQATKV-------GSDAVLSQII---------SLVETAQMS 543
                  +  T   H VL    TK+       G    L+ ++          LV +    
Sbjct: 298 DDDEDLFLYETSKKH-VLF-GGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYP 355

Query: 544 KAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSIS 603
           K  + KF    +  F+  +  LAL  +   Y            L ++G      ++ S+ 
Sbjct: 356 KPRVFKF-YKDSFKFILFLAVLALIGF--IYTIIE--------LIKDGRPLGKIILRSLD 404

Query: 604 VVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLT 659
           ++ I  P AL       +  +       G+       +  A KI    FDKTGTLT
Sbjct: 405 IITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLT 460

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054

>gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

 Score = 57.9 bits (140), Expect = 2e-08
 Identities = 75/277 (27%), Positives = 122/277 (44%), Gaps = 37/277 (13%)

Query: 401 SAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQ 460
           SA++I    F  Y E     K+S  ++    + P  AL V++D      E+  I+A  + 
Sbjct: 111 SAVVIITGCFSYYQE----AKSSKIMESFKNMVPQQAL-VIRDG-----EKMSINAEQVV 160

Query: 461 SGDTLKVLPGTKLPAD-GIVVWGTSYVNESMVTGEAVPVLKEIN----SPVIGGTINLHG 515
            GD ++V  G ++PAD  I+      V+ S +TGE+ P  +       +P+    I    
Sbjct: 161 VGDLVEVKGGDRIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFS 220

Query: 516 VLHIQAT------KVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFT 569
              ++ T        G   V+ +I SL    +  K PI    +     F+ I+  +A+F 
Sbjct: 221 TNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKTPIAIEIEH----FIHIITGVAVFL 276

Query: 570 WLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVG- 628
            + +++  ++  Y   WL         A++F I ++V   P  L LAT T  +  T    
Sbjct: 277 GVSFFILSLILGY--TWLE--------AVIFLIGIIVANVPEGL-LATVTVCLTLTAKRM 325

Query: 629 ANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATV 665
           A    L+K  +A+E       +  DKTGTLTQ R TV
Sbjct: 326 ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTV 362

This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997

>gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase

 Score = 55.6 bits (134), Expect = 9e-08
 Identities = 103/495 (20%), Positives = 175/495 (35%), Gaps = 106/495 (21%)

Query: 421 KTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVV 480
           ++  +++ L +L P    L+      +  +   + A  +  GD + +  G ++PAD  +V
Sbjct: 103 RSEKSLEALNKLVPPECHLI------REGKLEHVLASTLVPGDLVCLSVGDRVPADLRIV 156

Query: 481 WGTSY-VNESMVTGEAVPVLKEIN----SPVIG----------GTINLHGVLHIQATKVG 525
                 ++ES +TGE  PV K       +              GT+   G         G
Sbjct: 157 EAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTG 216

Query: 526 SDAVLSQIISLVETAQMSKAPIQKFAD-------FVASIFVPIVVTLALFTWLCWYVAGV 578
           S+     +  +++  +  K P+QK  D        V+   + ++  +  F          
Sbjct: 217 SNTEFGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWF---------- 266

Query: 579 LGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGV--GANNGVLIK 636
            G   + WL           MF+ISV +       GL     V +A GV   +    +++
Sbjct: 267 QG---KDWLE----------MFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVR 313

Query: 637 GGDALERAQKIKYVIFDKTGTLTQGRATVTT----------------------------A 668
              ++E    +  +  DKTGTLT+   TVT                              
Sbjct: 314 KLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVL 373

Query: 669 KVFTKMDRGEFLT---LVASAEASSEH------PLAKAVVEYARHFHFFDDPSLNPDGQS 719
             F  +     L    L  +A+  +E       P   A++E    F   DD        +
Sbjct: 374 HGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFG-LDDLRETYIRVA 432

Query: 720 HSKESTGSGWLLDVSDFSALPGRGIQCFISG--KQVLVGNRKLLNESGITIPDHVESFVV 777
               S+   W+           R   CF+ G  +QVL        + G T+    +   V
Sbjct: 433 EVPFSSERKWMA--VKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDV 490

Query: 778 ELEESARTG------ILVAYDDNL-----IGVMGIADPVKREAAVVVEGLLKMGVRPVMV 826
             EE+A         I  A          +G++GI DP +      V  L+  GVR +M+
Sbjct: 491 IQEEAAEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMI 550

Query: 827 TGDNWRTAHAVAREV 841
           TGD+  TA ++AR +
Sbjct: 551 TGDSQETAVSIARRL 565

This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884

>gnl|CDD|184298 PRK13748, PRK13748, putative mercuric reductase; Provisional

 Score = 54.8 bits (132), Expect = 1e-07
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)

Query: 133 TIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFE 192
            I GMTC +C   V+  L  +PGV+ A V+      ++  +    S D +  A+   G+ 
Sbjct: 5   KITGMTCDSCAAHVKDALEKVPGVQSADVSYPKGSAQLAIEVGT-SPDALTAAVAGLGYR 63

Query: 193 ASFVQSSGQDK 203
           A+   +   D 
Sbjct: 64  ATLADAPPTDN 74

Length = 561

>gnl|CDD|188014 TIGR00003, TIGR00003, copper ion binding protein

 Score = 47.2 bits (112), Expect = 5e-07
 Identities = 21/58 (36%), Positives = 31/58 (53%)

Query: 136 GMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
           GM+C  CV+ +E  +  + GV +  V L      VE+D   +S  +I  AI DAG+E 
Sbjct: 8   GMSCNHCVDKIEKFVGEIEGVSKVKVQLEKEKVVVEFDAPNVSATEICEAILDAGYEV 65

This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases [Transport and binding proteins, Cations and iron carrying compounds]. Length = 66

>gnl|CDD|131107 TIGR02052, MerP, mercuric transport protein periplasmic component

 Score = 46.2 bits (109), Expect = 3e-06
 Identities = 23/64 (35%), Positives = 33/64 (51%)

Query: 134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
           + GMTC AC  +VE  L+ + GV +A V   T L  V +D    +   +  A  DAG+ +
Sbjct: 29  VPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEKTNVKALTEATTDAGYPS 88

Query: 194 SFVQ 197
           S  Q
Sbjct: 89  SLKQ 92

This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403) [Cellular processes, Detoxification]. Length = 92

>gnl|CDD|131107 TIGR02052, MerP, mercuric transport protein periplasmic component

 Score = 45.8 bits (108), Expect = 4e-06
 Identities = 24/66 (36%), Positives = 35/66 (53%)

Query: 48  IQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDA 107
           + + V GMTC AC  +VE AL  + GV+KA V      A V FD +    + +  A  DA
Sbjct: 25  VTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEKTNVKALTEATTDA 84

Query: 108 GFEAEI 113
           G+ + +
Sbjct: 85  GYPSSL 90

This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403) [Cellular processes, Detoxification]. Length = 92

>gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase

 Score = 46.9 bits (111), Expect = 8e-06
 Identities = 38/195 (19%), Positives = 66/195 (33%), Gaps = 64/195 (32%)

Query: 647 IKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFH 706
           IK V+FD  GTLT G   V  A+          L   A+        L  A+V  A    
Sbjct: 1   IKAVVFDLDGTLTDGEPVVPEAE--------ALLEAAAA--------LGVAIVIAAGENL 44

Query: 707 FFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGI 766
                                                            G  +L+    +
Sbjct: 45  T----------------------------------------------KEGREELVRR--L 56

Query: 767 TIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMV 826
            +       ++E    A   ++   D  ++G++ + DP+   A   ++ L + G++  ++
Sbjct: 57  LLRALAGEELLEELLRAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAIL 116

Query: 827 TGDNWRTAHAVAREV 841
           TGDN  TA+A+AR +
Sbjct: 117 TGDNRLTANAIARLL 131

This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187

>gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional

 Score = 48.6 bits (116), Expect = 1e-05
 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 3/67 (4%)

Query: 48  IQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDA 107
            Q+ ++GM+CA+C + V+ AL  + GV +A V L +  A V+        +D+  A+E A
Sbjct: 101 QQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGSAS---PQDLVQAVEKA 157

Query: 108 GFEAEIL 114
           G+ AE +
Sbjct: 158 GYGAEAI 164

Length = 834

>gnl|CDD|184298 PRK13748, PRK13748, putative mercuric reductase; Provisional

 Score = 47.8 bits (114), Expect = 2e-05
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)

Query: 52  VTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA 111
           +TGMTC +C+  V+ AL  + GV  A V+  +  A +  +      + +  A+   G+ A
Sbjct: 6   ITGMTCDSCAAHVKDALEKVPGVQSADVSYPKGSAQLAIEVG-TSPDALTAAVAGLGYRA 64

Query: 112 EILAESSTSGP 122
            +     T   
Sbjct: 65  TLADAPPTDNR 75

Length = 561

>gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase

 Score = 47.9 bits (114), Expect = 2e-05
 Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 2/54 (3%)

Query: 790 AYDDNL--IGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREV 841
           A + +L  IGV+G+ DP + E A  +E     G+R +M+TGDN  TA A+ R +
Sbjct: 521 AIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRI 574

This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917

>gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase

 Score = 47.2 bits (112), Expect = 3e-05
 Identities = 64/264 (24%), Positives = 107/264 (40%), Gaps = 52/264 (19%)

Query: 421 KTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVV 480
           + + A+K +V+   AT L V+ +     ++E  IDAL+   GD +++  G  +PAD  V+
Sbjct: 114 RAAYALKNMVK-NTATVLRVINENGNGSMDEVPIDALV--PGDLIELAAGDIIPADARVI 170

Query: 481 WGTS-YVNESMVTGEAVPVLKEI-------NSPVIGGTINLHG--VL--HIQATKV--GS 526
                ++N+S +TGE++PV K +          +    +   G  VL  H QA  +  GS
Sbjct: 171 SARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGS 230

Query: 527 DAVLSQI-ISLVETA-----QMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLG 580
                 + I+  E             + K       + VP+V+ +       W       
Sbjct: 231 STWFGSLAIAATERRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKGDW------- 283

Query: 581 AYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANN----GVLIK 636
                         + A +F+++V V   P  L    P  V      GA N     V++K
Sbjct: 284 --------------LEAFLFALAVAVGLTPEML----PMIVSSNLAKGAINMSKKKVIVK 325

Query: 637 GGDALERAQKIKYVIFDKTGTLTQ 660
              A++    +  +  DKTGTLTQ
Sbjct: 326 ELSAIQNFGAMDILCTDKTGTLTQ 349

This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867

>gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional

 Score = 45.0 bits (107), Expect = 2e-04
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 52  VTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA 111
           V+GM C +C+  VE A+  L GV +  V     K  V  D D+     +++A++ AGF  
Sbjct: 59  VSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIR--AQVESAVQKAGFS- 115

Query: 112 EILAESSTSGPKP 124
             L +   +   P
Sbjct: 116 --LRDEQAAAAAP 126

Length = 741

>gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type

 Score = 43.8 bits (103), Expect = 4e-04
 Identities = 21/50 (42%), Positives = 32/50 (64%)

Query: 795 LIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844
            +G++GI DP + E+A  VE   + G+   M+TGD   TA A+A+EV +I
Sbjct: 637 FLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGII 686

Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053

>gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional

 Score = 43.1 bits (102), Expect = 6e-04
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)

Query: 134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
           + GM C +C   VE  +R L GV +  V  AT    V+ D  +  +  + +A++ AGF  
Sbjct: 59  VSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDI--RAQVESAVQKAGFSL 116

Query: 194 SFVQSSGQDK 203
              Q++    
Sbjct: 117 RDEQAAAAAP 126

Length = 741

>gnl|CDD|215516 PLN02957, PLN02957, copper, zinc superoxide dismutase

 Score = 41.7 bits (98), Expect = 7e-04
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 3/57 (5%)

Query: 137 MTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
           M C  CV +V+  L  L GVK   V L+  +  V     V     +  A+E  G +A
Sbjct: 14  MKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGSSPV---KAMTAALEQTGRKA 67

Length = 238

>gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase

 Score = 42.8 bits (101), Expect = 8e-04
 Identities = 21/46 (45%), Positives = 28/46 (60%)

Query: 795 LIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVARE 840
           LIGV+GI DP++      V+   + G+   MVTGDN  TA A+AR 
Sbjct: 573 LIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARN 618

This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	845
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	100.0
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	100.0
PRK10671	834	copA copper exporting ATPase; Provisional	100.0
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	100.0
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	100.0
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	100.0
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	100.0
PRK01122	679	potassium-transporting ATPase subunit B; Provision	100.0
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	100.0
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	100.0
PRK14010	673	potassium-transporting ATPase subunit B; Provision	100.0
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	100.0
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	100.0
PRK15122	903	magnesium-transporting ATPase; Provisional	100.0
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	100.0
KOG0204	1034	consensus Calcium transporting ATPase [Inorganic i	100.0
KOG0202	972	consensus Ca2+ transporting ATPase [Inorganic ion	100.0
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	100.0
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	100.0
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	100.0
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	100.0
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	100.0
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	100.0
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	100.0
KOG0208	1140	consensus Cation transport ATPase [Inorganic ion t	100.0
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	100.0
COG2216	681	KdpB High-affinity K+ transport system, ATPase cha	100.0
KOG0205	942	consensus Plasma membrane H+-transporting ATPase [	100.0
KOG0203	1019	consensus Na+/K+ ATPase, alpha subunit [Inorganic	100.0
PLN03190	1178	aminophospholipid translocase; Provisional	100.0
KOG0209	1160	consensus P-type ATPase [Inorganic ion transport a	100.0
KOG0210	1051	consensus P-type ATPase [Inorganic ion transport a	100.0
KOG0206	1151	consensus P-type ATPase [General function predicti	100.0
PF00122	230	E1-E2_ATPase: E1-E2 ATPase p-type cation-transport	100.0
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	99.8
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	99.55
PF00403	62	HMA: Heavy-metal-associated domain; InterPro: IPR0	99.21
PRK10671	834	copA copper exporting ATPase; Provisional	99.16
PF00403	62	HMA: Heavy-metal-associated domain; InterPro: IPR0	99.11
COG2608	71	CopZ Copper chaperone [Inorganic ion transport and	99.07
COG2608	71	CopZ Copper chaperone [Inorganic ion transport and	99.06
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	98.0
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	97.93
TIGR00003	68	copper ion binding protein. This model describes a	97.35
TIGR00003	68	copper ion binding protein. This model describes a	97.29
KOG4656	247	consensus Copper chaperone for superoxide dismutas	97.01
PLN02957	238	copper, zinc superoxide dismutase	97.0
KOG4656	247	consensus Copper chaperone for superoxide dismutas	96.83
PLN02957	238	copper, zinc superoxide dismutase	96.83
KOG1603	73	consensus Copper chaperone [Inorganic ion transpor	96.82
KOG1603	73	consensus Copper chaperone [Inorganic ion transpor	96.45
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	92.62
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	91.63
TIGR02052	92	MerP mercuric transport protein periplasmic compon	91.15
COG4087	152	Soluble P-type ATPase [General function prediction	90.91
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	90.91
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	90.05
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	89.92
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	89.88
PF00873	1021	ACR_tran: AcrB/AcrD/AcrF family; InterPro: IPR0010	89.75
TIGR02052	92	MerP mercuric transport protein periplasmic compon	89.65
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	88.93
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	88.63
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	88.61
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	88.35
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	86.91
PLN02954	224	phosphoserine phosphatase	86.61
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	86.23
PRK06769	173	hypothetical protein; Validated	85.9
PRK01158	230	phosphoglycolate phosphatase; Provisional	85.83
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	85.29
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	85.12
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	85.01
PRK14054	172	methionine sulfoxide reductase A; Provisional	84.63
PRK10513	270	sugar phosphate phosphatase; Provisional	84.55
PRK10976	266	putative hydrolase; Provisional	83.66
PHA03398	303	viral phosphatase superfamily protein; Provisional	83.64
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	83.05
PRK13222	226	phosphoglycolate phosphatase; Provisional	82.69
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	82.46
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	82.05
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	81.8
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	81.16
TIGR00915	1044	2A0602 The (Largely Gram-negative Bacterial) Hydro	80.82
PRK05528	156	methionine sulfoxide reductase A; Provisional	80.67
COG2177	297	FtsX Cell division protein [Cell division and chro	80.59
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	80.57

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=1.5e-123  Score=1029.56  Aligned_cols=754  Identities=46%  Similarity=0.735  Sum_probs=685.3

Q ss_pred             CCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhhcccCCCCCCCCceeeecc
Q 003131           53 TGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGPKPQGTIVGQY  132 (845)
Q Consensus        53 ~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~~~~~~~~~~~  132 (845)
                      .||+|..|.+.+++++++.+|+.++.+++.++++.+.|+ ...+++.+.+.+++.||+++..+.+....      .+..+
T Consensus         1 ~gmtc~ac~~si~~~~~~~~g~~~i~vsl~~~~~~v~~~-~~~~~~~i~~~ied~gf~~~~~~~~~~~~------~~~~l   73 (951)
T KOG0207|consen    1 KGMTCSACSNSIEKAISRKPGVQKIEVSLAQKRANVSYD-NIVSPESIKETIEDMGFEASLLSDSEITA------SKCYL   73 (951)
T ss_pred             CCccHHHHhhhHHHHHhcCCCceeEEEEeccccceEEEe-eccCHHHHHHHhhcccceeeecccCcccc------ceeEE
Confidence            499999999999999999999999999999999999999 78999999999999999998776544322      25689


Q ss_pred             ccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeeccCC---cceeEEEEe
Q 003131          133 TIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSG---QDKILLQVT  209 (845)
Q Consensus       133 ~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~~---~~~~~~~v~  209 (845)
                      ++.||+|++|+..+|+.+++.+|+.++.+.+..+.+.+.|||..++++.+.+.++++||.+....+.+   ..++.|.|.
T Consensus        74 ~v~GmtC~scv~~i~~~l~~~~gv~~~~val~~~~~~v~~dp~v~s~~~~~e~ie~~gf~a~~i~~~~~~~~~~i~L~v~  153 (951)
T KOG0207|consen   74 SVNGMTCASCVATIERNLRKIEGVESAVVALSASKAEVIYDPAVTSPDSIAESIEDLGFSAELIESVNGNSNQKIYLDVL  153 (951)
T ss_pred             EecCceeHHHHHHHHHHhhccCCcceEEEEeeccceeEEECCcccCchhHHHHHHhcCccceehhcccCCCCCcEEEEee
Confidence            99999999999999999999999999999999999999999999999999999999999999876542   258899999


Q ss_pred             cccchhhhHHHHhhhccCCCceEEEeecCCCeEEEEeCCCCCChhhHHHhhhhcCCCcceEeecCccccc---cccchHH
Q 003131          210 GVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARM---TSRDSEE  286 (845)
Q Consensus       210 gm~c~~c~~~ie~~l~~~~gV~~~~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~~~~~~~~~---~~~~~~~  286 (845)
                      ||.|++|+..+|+.+.+++||.+++++..++++.|.|||..++++++.+.++..+   |.+.........   ..+...+
T Consensus       154 g~~c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~~~~pr~i~k~ie~~~---~~~~~~~~~~~~~~~~l~~~~e  230 (951)
T KOG0207|consen  154 GMTCASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPEITGPRDIIKAIEETG---FEASVRPYGDTTFKNSLKHKEE  230 (951)
T ss_pred             cccccchhhhhHHHHhhccCeeEEEEeccCCceEEEecccccChHHHHHHHHhhc---ccceeeeccccchhhhhhhhhH
Confidence            9999999999999999999999999999999999999999999999999999998   665543322111   2234556


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHhhhccCCCchHHHHHHHHHHHhhhccChHHHHHHHHHHHcCCCCch
Q 003131          287 TSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMD  366 (845)
Q Consensus       287 ~~~~~~~~~~a~ilal~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~~md  366 (845)
                      .+.|++.|..+..+++|++++.+..++..+....+.....++.+..++.++|++|++|..||+||..||++|+++..|||
T Consensus       231 i~~w~~~fl~s~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~vqf~~G~~fy~~A~ksL~~g~~nMd  310 (951)
T KOG0207|consen  231 IRKWKRPFLISLGFSLPVSFAMIICPPLAWILALLVPFLPGLSYGNSLSFVLATPVQFVGGRPFYLAAYKSLKRGSANMD  310 (951)
T ss_pred             HHhcchHHHHHHHHHHHHHHHHHHhccchhhhhhhccccccchhhhHHHhhhheeeEEecceeeHHHHHHHHhcCCCCce
Confidence            78999999999999999988887776644422222222456778889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCC
Q 003131          367 VLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVG  446 (845)
Q Consensus       367 ~L~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g  446 (845)
                      +|+.+++.++|+||++.++...... .+.+||+++.|++.|+++|+|+|.+++.|+..++.+|.++.|..+.++   .+|
T Consensus       311 vLv~L~t~aay~~S~~~~~~~~~~~-~~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii---~~g  386 (951)
T KOG0207|consen  311 VLVVLGTTAAYFYSIFSLLAAVVFD-SPPTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATII---EDG  386 (951)
T ss_pred             eehhhHHHHHHHHHHHHHHHHHHcc-CcchhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEe---ecC
Confidence            9999999999999999988776663 378999999999999999999999999999999999999999999998   666


Q ss_pred             ceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEecceeeeccccCCcceeeeccCCCceeccceeecceEEEEEEEecC
Q 003131          447 KCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGS  526 (845)
Q Consensus       447 ~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G~~~Vdes~LTGEs~pv~k~~~~~v~aGt~~~~g~~~~~v~~~g~  526 (845)
                      .  .+++|+++.|++||+|.|+||++||+||+|++|++.||||++|||++|+.|++|+.|.+||+|.+|.+.++++++|.
T Consensus       387 ~--~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~  464 (951)
T KOG0207|consen  387 S--EEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSSEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGG  464 (951)
T ss_pred             C--cceEeeeeeeccCCEEEECCCCccccccEEEeCceeechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccc
Confidence            2  27899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccHHHHHHHHHHhhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhc-CCCCCCcCCCCCchHHHHHHHHhhhh
Q 003131          527 DAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVL-GAYPEQWLPENGTHFVFALMFSISVV  605 (845)
Q Consensus       527 ~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~vl  605 (845)
                      ||.+++|+++++++|.+|+|+|+++|+++.||+|.++++++++|++|.+.+.+ ..++..|.    ..+..+|..+++++
T Consensus       465 dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~----~~~~~a~~~aisVl  540 (951)
T KOG0207|consen  465 DTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFF----DAFSHAFQLAISVL  540 (951)
T ss_pred             cchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhh----HHHHHHHHhhheEE
Confidence            99999999999999999999999999999999999999999999999998763 33444443    67889999999999


Q ss_pred             eeecccccchhhHHHHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccC-CChhhHHHHHh
Q 003131          606 VIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTK-MDRGEFLTLVA  684 (845)
Q Consensus       606 v~~~P~~L~la~p~~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~-~~~~~~~~~~~  684 (845)
                      +++|||+|+||+|++.+.+++.++++|+++|+++.+|.+.++++++||||||||+|++.|.++..+.+ ++..+++.+++
T Consensus       541 viACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~~~~e~l~~v~  620 (951)
T KOG0207|consen  541 VIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPISLKEALALVA  620 (951)
T ss_pred             EEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcccHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999877 67899999999


Q ss_pred             hhhccCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCc--eEEEEcCeEEEEeehhhhh
Q 003131          685 SAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRG--IQCFISGKQVLVGNRKLLN  762 (845)
Q Consensus       685 ~~~~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g--i~~~~~g~~~~~g~~~~~~  762 (845)
                      +.|..+.||+++|+++|++....                   ......+..|++.+|+|  +.+.++|.++.+||++|+.
T Consensus       621 a~Es~SeHPig~AIv~yak~~~~-------------------~~~~~~~~~~~~~pg~g~~~~~~~~~~~i~iGN~~~~~  681 (951)
T KOG0207|consen  621 AMESGSEHPIGKAIVDYAKEKLV-------------------EPNPEGVLSFEYFPGEGIYVTVTVDGNEVLIGNKEWMS  681 (951)
T ss_pred             HHhcCCcCchHHHHHHHHHhccc-------------------ccCccccceeecccCCCcccceEEeeeEEeechHHHHH
Confidence            99999999999999999988731                   01123455788888888  6788899999999999999


Q ss_pred             hcCCCCChhhHHHHHHHHHccCeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 003131          763 ESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVC  842 (845)
Q Consensus       763 ~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~G  842 (845)
                      +++...+++.++.+++.+..|+++++++.|+++.|++.++|++|||+..+|+.||++||++.||||||..||+++|+++|
T Consensus       682 r~~~~~~~~i~~~~~~~e~~g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VG  761 (951)
T KOG0207|consen  682 RNGCSIPDDILDALTESERKGQTVVYVAVNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVG  761 (951)
T ss_pred             hcCCCCchhHHHhhhhHhhcCceEEEEEECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCC
Q 003131          843 VID  845 (845)
Q Consensus       843 I~~  845 (845)
                      |++
T Consensus       762 i~~  764 (951)
T KOG0207|consen  762 IDN  764 (951)
T ss_pred             cce
Confidence            864

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=6.9e-104  Score=897.69  Aligned_cols=575  Identities=43%  Similarity=0.678  Sum_probs=515.5

Q ss_pred             ceeEEEEecccchhhhHHHHhhhccCCCceEEEeecCCCeEEEEeCCCCCC-hhhHHHhhhhcCCCcceEeecCccc-cc
Q 003131          202 DKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALS-SRSLVDGIAGRSNGKFQIRVMNPFA-RM  279 (845)
Q Consensus       202 ~~~~~~v~gm~c~~c~~~ie~~l~~~~gV~~~~v~~~~~~~~V~~d~~~~~-~~~i~~~i~~~g~~~~~~~~~~~~~-~~  279 (845)
                      .+..+.++||+|++|+.++| .+++.+||.++++|+.++++.+.||+...+ .+++.+.++..|   |......... ..
T Consensus         2 ~~~~l~v~Gm~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~~~~~~~~~~~~v~~~g---y~~~~~~~~~~~~   77 (713)
T COG2217           2 RETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLPADIVAAVEKAG---YSARLTAALADPA   77 (713)
T ss_pred             ceeEEeecCcCcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEecccccccHHHHHHHHHhcC---ccccccccccchh
Confidence            35678999999999999999 999999999999999999999999998777 799999999999   7554311000 00


Q ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHhhhccCCCchHHHHHHHHHHHhhhccChHHHHHHHHHHH
Q 003131          280 TSRDSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALR  359 (845)
Q Consensus       280 ~~~~~~~~~~~~~~~~~a~ilal~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~a~~~l~  359 (845)
                      ..+.... ...+++++.+.++.++.++..+....             ...+..|+++++++|++||.|+|||+.+|+.++
T Consensus        78 ~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~l~~~v~~~~g~~f~~~a~~~l~  143 (713)
T COG2217          78 EAEARLL-RELLRRLIIAGLLTLPLLLLSLGLLL-------------GAFLLPWVSFLLATPVLFYGGWPFYRGAWRALR  143 (713)
T ss_pred             hhhhhhh-hhHHHHHHHHHHHHHHHHHHHHHhhc-------------chhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence            0011011 33455566666776666554332211             013567899999999999999999999999999


Q ss_pred             cCCCCchHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEE
Q 003131          360 NGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALL  439 (845)
Q Consensus       360 ~~~~~md~L~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v  439 (845)
                      ++.+|||+|+++|+..||+||.+.++..        .||++++++++|+++|+++|.+++.|+++++++|.++.|+++++
T Consensus       144 ~~~~~md~Lv~la~~~A~~~s~~~~~~~--------~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~  215 (713)
T COG2217         144 RGRLNMDTLVALATIGAYAYSLYATLFP--------VYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATV  215 (713)
T ss_pred             cCCCChHHHHHHHHHHHHHHHHHHHhhh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEE
Confidence            9999999999999999999999988863        89999999999999999999999999999999999999999988


Q ss_pred             EEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEecceeeeccccCCcceeeeccCCCceeccceeecceEEE
Q 003131          440 VVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHI  519 (845)
Q Consensus       440 ~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G~~~Vdes~LTGEs~pv~k~~~~~v~aGt~~~~g~~~~  519 (845)
                      +.  +||   ++++||+++|++||+|.|+|||+||+||+|++|++.||||+|||||.|+.|++||.|++||+|.+|.+++
T Consensus       216 ~~--~~~---~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i  290 (713)
T COG2217         216 VR--GDG---EEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTI  290 (713)
T ss_pred             Ee--cCC---cEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcEEeecchhhCCCCCEecCCCCEEeeeEEECCccEEE
Confidence            74  355   3789999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEecCccHHHHHHHHHHhhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHH
Q 003131          520 QATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALM  599 (845)
Q Consensus       520 ~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  599 (845)
                      +|+++|.+|++++|++++++++.+|+|+|+++|+++.+|+|.++++++++|++|++.+.             .+|..+++
T Consensus       291 ~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~-------------~~~~~a~~  357 (713)
T COG2217         291 RVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGG-------------GDWETALY  357 (713)
T ss_pred             EEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcC-------------CcHHHHHH
Confidence            99999999999999999999999999999999999999999999999999998887641             35778999


Q ss_pred             HHhhhheeecccccchhhHHHHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCChhhH
Q 003131          600 FSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEF  679 (845)
Q Consensus       600 ~~i~vlv~~~P~~L~la~p~~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~  679 (845)
                      +++++|+++|||+|++++|+++..++++++|+||++|+++++|+++++|+++||||||||+|+|.|+++...++ +++++
T Consensus       358 ~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~-~e~~~  436 (713)
T COG2217         358 RALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG-DEDEL  436 (713)
T ss_pred             HHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC-CHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999877 88999


Q ss_pred             HHHHhhhhccCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEEcCeEEEEeehh
Q 003131          680 LTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRK  759 (845)
Q Consensus       680 ~~~~~~~~~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~g~~~~~g~~~  759 (845)
                      +++++++|..|+||+++||++++...+                       ...+.+|++++|+|+++.++|..+.+|+++
T Consensus       437 L~laAalE~~S~HPiA~AIv~~a~~~~-----------------------~~~~~~~~~i~G~Gv~~~v~g~~v~vG~~~  493 (713)
T COG2217         437 LALAAALEQHSEHPLAKAIVKAAAERG-----------------------LPDVEDFEEIPGRGVEAEVDGERVLVGNAR  493 (713)
T ss_pred             HHHHHHHHhcCCChHHHHHHHHHHhcC-----------------------CCCccceeeeccCcEEEEECCEEEEEcCHH
Confidence            999999999999999999999887762                       134455899999999999999999999999


Q ss_pred             hhhhcCCCCChhhHHHHHHHHHccCeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH
Q 003131          760 LLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAR  839 (845)
Q Consensus       760 ~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~  839 (845)
                      ++.+++.+.+. ..+..+.++.+|.++++++.|++++|+++++|++|+|++++|++||+.|++++||||||+.+|.+||+
T Consensus       494 ~~~~~~~~~~~-~~~~~~~~~~~G~t~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~  572 (713)
T COG2217         494 LLGEEGIDLPL-LSERIEALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAK  572 (713)
T ss_pred             HHhhcCCCccc-hhhhHHHHHhcCCeEEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH
Confidence            99998877765 56667788899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCC
Q 003131          840 EVCVID  845 (845)
Q Consensus       840 ~~GI~~  845 (845)
                      ++||++
T Consensus       573 ~lGId~  578 (713)
T COG2217         573 ELGIDE  578 (713)
T ss_pred             HcChHh
Confidence            999974

>PRK10671 copA copper exporting ATPase; Provisional

Probab=100.00  E-value=3.7e-94  Score=864.63  Aligned_cols=654  Identities=33%  Similarity=0.523  Sum_probs=552.6

Q ss_pred             eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeeccC---------
Q 003131          129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSS---------  199 (845)
Q Consensus       129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~---------  199 (845)
                      +.++.|+||+|++|+.+|++++++++||.++.+++.  +..++..   .+.+.+.+.++++||++....+.         
T Consensus         4 ~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~~--~~~v~~~---~~~~~i~~~i~~~Gy~~~~~~~~~~~~~~~~~   78 (834)
T PRK10671          4 TIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSIT--EAHVTGT---ASAEALIETIKQAGYDASVSHPKAKPLTESSI   78 (834)
T ss_pred             EEEEEECCcccHHHHHHHHHHHhcCCCcceEEEeee--EEEEEec---CCHHHHHHHHHhcCCccccccccccccccccc
Confidence            468999999999999999999999999999999994  4555542   47889999999999998763210         


Q ss_pred             ------------------CcceeEEEEecccchhhhHHHHhhhccCCCceEEEeecCCCeEEEEeCCCCCChhhHHHhhh
Q 003131          200 ------------------GQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIA  261 (845)
Q Consensus       200 ------------------~~~~~~~~v~gm~c~~c~~~ie~~l~~~~gV~~~~v~~~~~~~~V~~d~~~~~~~~i~~~i~  261 (845)
                                        ...+..+.+.||+|+.|+..+++.+...+||.++.+++.+++..+.+   ..+.+++.+.++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~---~~s~~~I~~~I~  155 (834)
T PRK10671         79 PSEALTAASEELPAATADDDDSQQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMG---SASPQDLVQAVE  155 (834)
T ss_pred             CchhhhhhhhhccccccCcCceEEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEc---cCCHHHHHHHHH
Confidence                              01245688999999999999999999999999999999999988874   245677878888


Q ss_pred             hcCCCcceEeecCccc-cccccc---hHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHhhhccCCCchHHHHH-H
Q 003131          262 GRSNGKFQIRVMNPFA-RMTSRD---SEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLN-W  336 (845)
Q Consensus       262 ~~g~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~a~ilal~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~  336 (845)
                      +.|   |.....+... ......   ..+.+++.++++.+++++++++++.+....   +.  +    .+.....|+. +
T Consensus       156 ~~G---y~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~----~~~~~~~~~~~~  223 (834)
T PRK10671        156 KAG---YGAEAIEDDAKRRERQQETAQATMKRFRWQAIVALAVGIPVMVWGMIGDN---MM--V----TADNRSLWLVIG  223 (834)
T ss_pred             hcC---CCccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---cc--c----CccchhHHHHHH
Confidence            887   5443221110 000000   112233444555566666655544331000   00  0    0001123553 5


Q ss_pred             HHHHHhhhccChHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHhhhhc-CCCCcchhhhHHHHHHHHHHHHHHH
Q 003131          337 ALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVT-GFWSPTYFETSAMLITFVLFGKYLE  415 (845)
Q Consensus       337 ~l~~~~~~~~g~~~~~~a~~~l~~~~~~md~L~~l~~~~a~~~s~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~l~  415 (845)
                      ++++|++||+|+|||++||++|+++++|||+|+++|++++|+||++.++..... ....+.||++++++++|+++|+++|
T Consensus       224 ~~~~~~~~~~g~~~~~~a~~~l~~~~~~md~l~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le  303 (834)
T PRK10671        224 LITLAVMVFAGGHFYRSAWKSLLNGSATMDTLVALGTGAAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGHMLE  303 (834)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHH
Confidence            678899999999999999999999999999999999999999999876642111 1122569999999999999999999


Q ss_pred             HHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEecceeeeccccCCcc
Q 003131          416 ILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEA  495 (845)
Q Consensus       416 ~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G~~~Vdes~LTGEs  495 (845)
                      .+++.|+++.+++|.++.|++++++   |+|   .+++|++++|+|||+|.|++||+||+||+|++|++.||||+|||||
T Consensus       304 ~~~~~~~~~~~~~L~~l~p~~a~~~---~~~---~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~~~vdeS~lTGEs  377 (834)
T PRK10671        304 ARARQRSSKALEKLLDLTPPTARVV---TDE---GEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEP  377 (834)
T ss_pred             HHHHHHHHHHHHHHhccCCCEEEEE---eCC---cEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEceEEEeehhhcCCC
Confidence            9999999999999999999999998   777   5689999999999999999999999999999999999999999999


Q ss_pred             eeeeccCCCceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q 003131          496 VPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYV  575 (845)
Q Consensus       496 ~pv~k~~~~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~  575 (845)
                      .|+.|++||.||+||+|.+|.++++|+++|.+|.+++|.+++++++.+|+|+|+.+|+++++|+|++++++++++++|++
T Consensus       378 ~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~  457 (834)
T PRK10671        378 IPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYF  457 (834)
T ss_pred             CCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999876


Q ss_pred             HhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCC
Q 003131          576 AGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKT  655 (845)
Q Consensus       576 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKT  655 (845)
                      .+.            ...|..++.+++++++++|||+|++++|+++..++.+++|+||++|+++++|+++++|++|||||
T Consensus       458 ~~~------------~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKT  525 (834)
T PRK10671        458 FGP------------APQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKT  525 (834)
T ss_pred             hCC------------chHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCC
Confidence            431            12356688899999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCeEEEEEEeccCCChhhHHHHHhhhhccCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCcccccccc
Q 003131          656 GTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSD  735 (845)
Q Consensus       656 GTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (845)
                      ||||+|+|+|.++...++.++.+++.+++++|..++||+++||++++....                       ...+.+
T Consensus       526 GTLT~g~~~v~~~~~~~~~~~~~~l~~a~~~e~~s~hp~a~Ai~~~~~~~~-----------------------~~~~~~  582 (834)
T PRK10671        526 GTLTEGKPQVVAVKTFNGVDEAQALRLAAALEQGSSHPLARAILDKAGDMT-----------------------LPQVNG  582 (834)
T ss_pred             CccccCceEEEEEEccCCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHhhCC-----------------------CCCccc
Confidence            999999999999988877788889999999999999999999998875321                       123457


Q ss_pred             ccccCCCceEEEEcCeEEEEeehhhhhhcCCCCChhhHHHHHHHHHccCeEEEEEECCeEEEEEEeeCCCChhHHHHHHH
Q 003131          736 FSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEG  815 (845)
Q Consensus       736 ~~~~~g~gi~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~  815 (845)
                      +++++|+|+.++++|..+.+|+++++.+.+... +.+.+..++++++|.+++++++|+.++|++.+.|++||+++++|++
T Consensus       583 ~~~~~g~Gv~~~~~g~~~~~G~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~  661 (834)
T PRK10671        583 FRTLRGLGVSGEAEGHALLLGNQALLNEQQVDT-KALEAEITAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQR  661 (834)
T ss_pred             ceEecceEEEEEECCEEEEEeCHHHHHHcCCCh-HHHHHHHHHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHH
Confidence            888999999999999999999999998766543 3355566777889999999999999999999999999999999999


Q ss_pred             HHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          816 LLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       816 L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      |++.|++++|+|||+..+|.++|+++||+
T Consensus       662 L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~  690 (834)
T PRK10671        662 LHKAGYRLVMLTGDNPTTANAIAKEAGID  690 (834)
T ss_pred             HHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence            99999999999999999999999999996

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=100.00  E-value=3.5e-85  Score=770.09  Aligned_cols=556  Identities=27%  Similarity=0.407  Sum_probs=473.0

Q ss_pred             cceeEEEEecccchhhhHHHHhhhccCCCceEEEeecCCCeEEEEeCCCCCChhhHHHhhhhcCCCcceEeecCcccccc
Q 003131          201 QDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMT  280 (845)
Q Consensus       201 ~~~~~~~v~gm~c~~c~~~ie~~l~~~~gV~~~~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~~~~~~~~~~  280 (845)
                      ..+.++.+.||+|.+|+..+++.+...+||.++++++.+++..+.|++.. . +++.+.+++.|   |+....+...   
T Consensus        52 ~~r~~l~V~Gm~C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~~-~-~~I~~aI~~~G---y~a~~~~~~~---  123 (741)
T PRK11033         52 GTRYSWKVSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDI-R-AQVESAVQKAG---FSLRDEQAAA---  123 (741)
T ss_pred             CceEEEEECCCCcHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEecccc-h-HHHHHHHHhcc---cccccccchh---
Confidence            45677889999999999999999999999999999999999999998863 2 66777778777   6543221110   


Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHhhhccCCCchHHHHHHHHHHHhhhccChHHHHHHHHHHHc
Q 003131          281 SRDSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRN  360 (845)
Q Consensus       281 ~~~~~~~~~~~~~~~~a~ilal~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~  360 (845)
                        ...+...++ ..... ++...+|++++.+..       +    .  +...|+.++++   .+|+|+|||++||+++++
T Consensus       124 --~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~-------~----~--~~~~~~~~~~~---~~~~~~~~~~~a~~~l~~  183 (741)
T PRK11033        124 --AAPESRLKS-ENLPL-ITLAVMMAISWGLEQ-------F----N--HPFGQLAFIAT---TLVGLYPIARKALRLIRS  183 (741)
T ss_pred             --hhHHHHHHH-HHHHH-HHHHHHHHHHHHHhh-------h----h--hHHHHHHHHHH---HHHHHHHHHHHHHHHHHc
Confidence              011111111 11111 111222222221110       0    0  11124444443   367899999999999999


Q ss_pred             CCC-CchHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEE
Q 003131          361 GST-NMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALL  439 (845)
Q Consensus       361 ~~~-~md~L~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v  439 (845)
                      +++ |||+|+++++.++++++               .| +.++++++++++|+++|.+++.|+++.+++|.++.|.++++
T Consensus       184 ~~~~~~~~L~~~a~~~a~~~~---------------~~-~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~v  247 (741)
T PRK11033        184 GSPFAIETLMSVAAIGALFIG---------------AT-AEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATR  247 (741)
T ss_pred             CCCCCccHHHHHHHHHHHHHc---------------ch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence            885 99999999999887764               23 45788899999999999999999999999999999999999


Q ss_pred             EEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEecceeeeccccCCcceeeeccCCCceeccceeecceEEE
Q 003131          440 VVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHI  519 (845)
Q Consensus       440 ~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G~~~Vdes~LTGEs~pv~k~~~~~v~aGt~~~~g~~~~  519 (845)
                      +   |||   ++++|++++|+|||+|.|++||+||+||+|++|++.||||+|||||.|+.|++|+.||+||++.+|.+++
T Consensus       248 i---r~g---~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i  321 (741)
T PRK11033        248 L---RDG---EREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFASFDESALTGESIPVERATGEKVPAGATSVDRLVTL  321 (741)
T ss_pred             E---ECC---EEEEEEHHHCCCCCEEEECCCCEEecceEEEECcEEeecccccCCCCCEecCCCCeeccCCEEcCceEEE
Confidence            8   788   6789999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEecCccHHHHHHHHHHhhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHH
Q 003131          520 QATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALM  599 (845)
Q Consensus       520 ~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  599 (845)
                      +|+++|.+|.++||.+++++++.+++|+|+.+|+++++|+|+++++++++|++|.+..             ..+|..++.
T Consensus       322 ~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~-------------~~~~~~~i~  388 (741)
T PRK11033        322 EVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLF-------------AAPWQEWIY  388 (741)
T ss_pred             EEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------------cCCHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999885532             124667888


Q ss_pred             HHhhhheeecccccchhhHHHHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCChhhH
Q 003131          600 FSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEF  679 (845)
Q Consensus       600 ~~i~vlv~~~P~~L~la~p~~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~  679 (845)
                      +++++++++|||+|++++|+++..++.+++|+||++|+++++|+++++|++|||||||||+|+|+|.+++.+++.+++++
T Consensus       389 ~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~~~~~  468 (741)
T PRK11033        389 RGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGISESEL  468 (741)
T ss_pred             HHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCCCHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998877788899


Q ss_pred             HHHHhhhhccCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEEcCeEEEEeehh
Q 003131          680 LTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRK  759 (845)
Q Consensus       680 ~~~~~~~~~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~g~~~~~g~~~  759 (845)
                      +.+++++|..+.||+++||+++++..+.                     .++...+++..+|.|+.+.++|..+.+|+++
T Consensus       469 l~~aa~~e~~s~hPia~Ai~~~a~~~~~---------------------~~~~~~~~~~~~g~Gv~~~~~g~~~~ig~~~  527 (741)
T PRK11033        469 LALAAAVEQGSTHPLAQAIVREAQVRGL---------------------AIPEAESQRALAGSGIEGQVNGERVLICAPG  527 (741)
T ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhcCC---------------------CCCCCcceEEEeeEEEEEEECCEEEEEecch
Confidence            9999999999999999999999876521                     1233456778889999999999999999999


Q ss_pred             hhhhcCCCCChhhHHHHHHHHHccCeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH
Q 003131          760 LLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAR  839 (845)
Q Consensus       760 ~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~  839 (845)
                      ++.+    .++++.+..++++.+|++++++++|++++|+++|+|++|+|++++|++||++|++++|+|||++.+|.++|+
T Consensus       528 ~~~~----~~~~~~~~~~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~  603 (741)
T PRK11033        528 KLPP----LADAFAGQINELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAG  603 (741)
T ss_pred             hhhh----ccHHHHHHHHHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence            8865    234455556778899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCC
Q 003131          840 EVCVI  844 (845)
Q Consensus       840 ~~GI~  844 (845)
                      ++||+
T Consensus       604 ~lgi~  608 (741)
T PRK11033        604 ELGID  608 (741)
T ss_pred             HcCCC
Confidence            99985

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=100.00  E-value=7.6e-79  Score=698.15  Aligned_cols=444  Identities=53%  Similarity=0.834  Sum_probs=408.3

Q ss_pred             cChHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHhhhhc-CCCCcchhhhHHHHHHHHHHHHHHHHHHhhhHHH
Q 003131          346 IGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVT-GFWSPTYFETSAMLITFVLFGKYLEILAKGKTSD  424 (845)
Q Consensus       346 ~g~~~~~~a~~~l~~~~~~md~L~~l~~~~a~~~s~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~k~~~  424 (845)
                      +|+|||++||++++++++|||+|++++++++|+||++.++.+... +...+.||++++++++++++|+++|.++++|+++
T Consensus         1 ~g~~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~a~~   80 (562)
T TIGR01511         1 AGRPFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILLGRWLEMLAKGRASD   80 (562)
T ss_pred             CcHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999988864322 1223579999999999999999999999999999


Q ss_pred             HHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEecceeeeccccCCcceeeeccCCC
Q 003131          425 AIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINS  504 (845)
Q Consensus       425 ~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G~~~Vdes~LTGEs~pv~k~~~~  504 (845)
                      .+++|.++.|.++++++  ++|   .+++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|++||
T Consensus        81 ~~~~L~~~~p~~a~~~~--~~~---~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~~vdes~lTGEs~pv~k~~gd  155 (562)
T TIGR01511        81 ALSKLAKLQPSTATLLT--KDG---SIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGESEVDESLVTGESLPVPKKVGD  155 (562)
T ss_pred             HHHHHHhcCCCEEEEEE--CCC---eEEEEEHHHCCCCCEEEECCCCEecCceEEEECceEEehHhhcCCCCcEEcCCCC
Confidence            99999999999999983  245   5689999999999999999999999999999999999999999999999999999


Q ss_pred             ceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 003131          505 PVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPE  584 (845)
Q Consensus       505 ~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~  584 (845)
                      .||+||++.+|.++++|+++|.+|.++++.+++++++.+|+|+++++|+++++|+|++++++++++++|.          
T Consensus       156 ~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~----------  225 (562)
T TIGR01511       156 PVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL----------  225 (562)
T ss_pred             EEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH----------
Confidence            9999999999999999999999999999999999999999999999999999999999999998888763          


Q ss_pred             CcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeE
Q 003131          585 QWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRAT  664 (845)
Q Consensus       585 ~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~  664 (845)
                                 .++.+++++++++|||+|++++|+++..++.+++++||++|+++++|+|+++|++|||||||||+|+|+
T Consensus       226 -----------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~  294 (562)
T TIGR01511       226 -----------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPT  294 (562)
T ss_pred             -----------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEE
Confidence                       256789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeccCCChhhHHHHHhhhhccCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCce
Q 003131          665 VTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGI  744 (845)
Q Consensus       665 v~~~~~~~~~~~~~~~~~~~~~~~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi  744 (845)
                      +.++...++.++++++.+++++|..++||+++|++++++..+.                     ....+.++++.+|+|+
T Consensus       295 v~~i~~~~~~~~~~~l~~aa~~e~~s~HPia~Ai~~~~~~~~~---------------------~~~~~~~~~~~~g~Gi  353 (562)
T TIGR01511       295 VTDVHVFGDRDRTELLALAAALEAGSEHPLAKAIVSYAKEKGI---------------------TLVEVSDFKAIPGIGV  353 (562)
T ss_pred             EEEEecCCCCCHHHHHHHHHHHhccCCChHHHHHHHHHHhcCC---------------------CcCCCCCeEEECCceE
Confidence            9999888777788999999999999999999999999876521                     1123456778899999


Q ss_pred             EEEEcCeEEEEeehhhhhhcCCCCChhhHHHHHHHHHccCeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEE
Q 003131          745 QCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPV  824 (845)
Q Consensus       745 ~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~  824 (845)
                      .+.++|.++.+|+++++.+.+..+++        ..++|.++++++.|++++|++.++|++||+++++|++||+.|++++
T Consensus       354 ~~~~~g~~~~iG~~~~~~~~~~~~~~--------~~~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~  425 (562)
T TIGR01511       354 EGTVEGTKIQLGNEKLLGENAIKIDG--------KAEQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPV  425 (562)
T ss_pred             EEEECCEEEEEECHHHHHhCCCCCCh--------hhhCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHcCCeEE
Confidence            99999999999999999877655432        3467999999999999999999999999999999999999999999


Q ss_pred             EEcCCCHHHHHHHHHHcCCC
Q 003131          825 MVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       825 mlTGD~~~tA~~iA~~~GI~  844 (845)
                      |+|||+..++.++++++||+
T Consensus       426 ilSgd~~~~a~~ia~~lgi~  445 (562)
T TIGR01511       426 MLTGDNRKTAKAVAKELGIN  445 (562)
T ss_pred             EEcCCCHHHHHHHHHHcCCc
Confidence            99999999999999999984

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=100.00  E-value=5.9e-68  Score=610.78  Aligned_cols=419  Identities=44%  Similarity=0.693  Sum_probs=379.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecC
Q 003131          365 MDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDK  444 (845)
Q Consensus       365 md~L~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r  444 (845)
                      ||+|++++++.+|++|.               | ..+++++++++++++++.++++|+++.+++|.++.|..++++   |
T Consensus         1 ~d~l~~~~~~~~~~~~~---------------~-~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~---r   61 (556)
T TIGR01525         1 MDLLMALATIAAYAMGL---------------V-LEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVL---Q   61 (556)
T ss_pred             CcHHHHHHHHHHHHHHH---------------H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEE---E
Confidence            89999999999998872               2 357788999999999999999999999999999999999999   6


Q ss_pred             C-CceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEecceeeeccccCCcceeeeccCCCceeccceeecceEEEEEEE
Q 003131          445 V-GKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATK  523 (845)
Q Consensus       445 ~-g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G~~~Vdes~LTGEs~pv~k~~~~~v~aGt~~~~g~~~~~v~~  523 (845)
                      + |   ++++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|++|+.||+||.+.+|.++++|++
T Consensus        62 ~~g---~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~  138 (556)
T TIGR01525        62 GDG---SEEEVPVEELQVGDIVIVRPGERIPVDGVVISGESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTK  138 (556)
T ss_pred             CCC---eEEEEEHHHCCCCCEEEECCCCEeccceEEEecceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEE
Confidence            6 4   56889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCccHHHHHHHHHHhhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhh
Q 003131          524 VGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSIS  603 (845)
Q Consensus       524 ~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  603 (845)
                      +|.+|++|++.+++++++.+++|+++.+++++.+|+++++++++++|++|++...               + .++.++++
T Consensus       139 ~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~---------------~-~~~~~~~~  202 (556)
T TIGR01525       139 LGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA---------------L-GALYRALA  202 (556)
T ss_pred             ecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------c-hHHHHHHH
Confidence            9999999999999999999999999999999999999999999999998876431               1 67889999


Q ss_pred             hheeecccccchhhHHHHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCC--hhhHHH
Q 003131          604 VVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMD--RGEFLT  681 (845)
Q Consensus       604 vlv~~~P~~L~la~p~~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~--~~~~~~  681 (845)
                      +++++|||+|++++|+++..++.+++++|+++|+++++|.++++|++|||||||||+|+|+|.+++..++.+  .++++.
T Consensus       203 vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~l~  282 (556)
T TIGR01525       203 VLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDASISEEELLA  282 (556)
T ss_pred             HHhhccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCCccHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999999998876654  678899


Q ss_pred             HHhhhhccCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccc-cccccCCCceEEEEcC-eEEEEeehh
Q 003131          682 LVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVS-DFSALPGRGIQCFISG-KQVLVGNRK  759 (845)
Q Consensus       682 ~~~~~~~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~gi~~~~~g-~~~~~g~~~  759 (845)
                      ++++++..+.||+++|++++++..+.. .                    .. . ++.+++|+|+.+.++| .++.+|+++
T Consensus       283 ~a~~~e~~~~hp~~~Ai~~~~~~~~~~-~--------------------~~-~~~~~~~~~~gi~~~~~g~~~~~lg~~~  340 (556)
T TIGR01525       283 LAAALEQSSSHPLARAIVRYAKKRGLE-L--------------------PK-QEDVEEVPGKGVEATVDGQEEVRIGNPR  340 (556)
T ss_pred             HHHHHhccCCChHHHHHHHHHHhcCCC-c--------------------cc-ccCeeEecCCeEEEEECCeeEEEEecHH
Confidence            999999999999999999999765310 0                    00 1 4556789999999999 699999999


Q ss_pred             hhhhcCCCCChhhHHHHHHHHHccCeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCC-CeEEEEcCCCHHHHHHHH
Q 003131          760 LLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMG-VRPVMVTGDNWRTAHAVA  838 (845)
Q Consensus       760 ~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~g-i~v~mlTGD~~~tA~~iA  838 (845)
                      ++.......+ +.+....++.++|++++++++|++++|.+.++|++||+++++|++|+++| ++++|+|||+..++.+++
T Consensus       341 ~~~~~~~~~~-~~~~~~~~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~  419 (556)
T TIGR01525       341 LLELAAEPIS-ASPDLLNEGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVA  419 (556)
T ss_pred             HHhhcCCCch-hhHHHHHHHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHH
Confidence            8844333332 23344566788999999999999999999999999999999999999999 999999999999999999


Q ss_pred             HHcCCC
Q 003131          839 REVCVI  844 (845)
Q Consensus       839 ~~~GI~  844 (845)
                      +++||+
T Consensus       420 ~~lgi~  425 (556)
T TIGR01525       420 AELGID  425 (556)
T ss_pred             HHhCCC
Confidence            999996

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=100.00  E-value=2.5e-68  Score=629.51  Aligned_cols=411  Identities=21%  Similarity=0.327  Sum_probs=353.7

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCcc
Q 003131          397 YFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPAD  476 (845)
Q Consensus       397 ~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaD  476 (845)
                      |.+ +++++++++++..++.++++|+++.+++|.++.|.+++|+   |||   ++++|++++|+|||+|.|++||+||||
T Consensus        55 ~~~-~~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~---Rdg---~~~~I~~~~Lv~GDiV~l~~Gd~IPaD  127 (755)
T TIGR01647        55 WVD-FVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVL---RDG---KWQEIPASELVPGDVVRLKIGDIVPAD  127 (755)
T ss_pred             hhh-hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE---ECC---EEEEEEhhhCcCCCEEEECCCCEEece
Confidence            444 5566677788889999999999999999999999999999   888   679999999999999999999999999


Q ss_pred             EEEEecc-eeeeccccCCcceeeeccCCCceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCChhhHHHHHHh
Q 003131          477 GIVVWGT-SYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVA  555 (845)
Q Consensus       477 g~ll~G~-~~Vdes~LTGEs~pv~k~~~~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~  555 (845)
                      |+|++|+ ..||||+|||||.|+.|.+|+.+|+||.+.+|.++++|++||.+|.+|+|.+++++++.+++|+|+.+++++
T Consensus       128 g~vi~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~  207 (755)
T TIGR01647       128 CRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIG  207 (755)
T ss_pred             EEEEecCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence            9999998 779999999999999999999999999999999999999999999999999999999988999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHHHHHHhcCeEE
Q 003131          556 SIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLI  635 (845)
Q Consensus       556 ~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~~~~~gilv  635 (845)
                      .++++++++++++++++|++..             ..+|..++.+++++++++|||+||+++|++++.+.++|+|+|+++
T Consensus       208 ~~~~~~~~~~~~i~~~~~~~~~-------------~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilv  274 (755)
T TIGR01647       208 LFLIVLIGVLVLIELVVLFFGR-------------GESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIV  274 (755)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHc-------------CCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEE
Confidence            9999999999988888776521             135778899999999999999999999999999999999999999


Q ss_pred             ecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccC-CChhhHHHHHhhh-hccCCChhHHHHHHHHhhcCcCCCCCC
Q 003131          636 KGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTK-MDRGEFLTLVASA-EASSEHPLAKAVVEYARHFHFFDDPSL  713 (845)
Q Consensus       636 k~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~-~~~~~~~~~~~~~-~~~s~~p~~~al~~~~~~~~~~~~~~~  713 (845)
                      |+++++|.||++|++|||||||||+|+|.|.+++..++ .+.++++.+++.+ +..+.||+++|+++++...+..     
T Consensus       275 k~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~-----  349 (755)
T TIGR01647       275 TRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEA-----  349 (755)
T ss_pred             cccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHH-----
Confidence            99999999999999999999999999999999987654 5677788877755 4778999999999987654200     


Q ss_pred             CCCCCCCccccCCCccccccccccccCCCceEEEEc----CeE--EEEeehhhhhhcCC---CCChhhHHHHHHHHHccC
Q 003131          714 NPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFIS----GKQ--VLVGNRKLLNESGI---TIPDHVESFVVELEESAR  784 (845)
Q Consensus       714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~----g~~--~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~  784 (845)
                       ..          ........+|++ .+++....++    |..  +.+|+++.+.+.+.   ..++++++..+++..+|+
T Consensus       350 -~~----------~~~~~~~~pf~~-~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~  417 (755)
T TIGR01647       350 -RD----------GYKVLEFVPFDP-VDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGY  417 (755)
T ss_pred             -Hh----------cCceEEEeccCC-CCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCC
Confidence             00          011122334443 3455555552    543  45799998765432   223455666778899999


Q ss_pred             eEEEEEE-----CCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          785 TGILVAY-----DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       785 ~~l~va~-----~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      |++++|+     +++|+|+++|+||+|||++++|++||++||+++|+||||+.||.+||+++||.
T Consensus       418 rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~  482 (755)
T TIGR01647       418 RALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLG  482 (755)
T ss_pred             EEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence            9999999     23899999999999999999999999999999999999999999999999996

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=100.00  E-value=2e-67  Score=600.25  Aligned_cols=408  Identities=25%  Similarity=0.331  Sum_probs=344.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCC-eEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCccEEE
Q 003131          401 SAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPA-TALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIV  479 (845)
Q Consensus       401 ~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~-~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~l  479 (845)
                      ...+++.++++.++|.+++.|+++.+++|.++.|+ +++++   |||+  .+++|++++|+|||+|.|++||+||+||+|
T Consensus        69 ~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vi---r~g~--~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~v  143 (679)
T PRK01122         69 TLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARKL---REPG--AAEEVPATELRKGDIVLVEAGEIIPADGEV  143 (679)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEE---ECCC--EEEEEEHHHcCCCCEEEEcCCCEEEEEEEE
Confidence            44555567899999999999999999999999986 68888   6662  268899999999999999999999999999


Q ss_pred             EecceeeeccccCCcceeeeccCCCc---eeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCChhhHHHHHHhh
Q 003131          480 VWGTSYVNESMVTGEAVPVLKEINSP---VIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVAS  556 (845)
Q Consensus       480 l~G~~~Vdes~LTGEs~pv~k~~~~~---v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~  556 (845)
                      ++|.+.||||+|||||.|+.|++|+.   ||+||.+.+|.++++|+++|.+|.++||.+++++++.+|+|+|...+.+..
T Consensus       144 ieG~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~  223 (679)
T PRK01122        144 IEGVASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLA  223 (679)
T ss_pred             EEccEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHH
Confidence            99999999999999999999999988   999999999999999999999999999999999999999999988887766


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHHHHHHhcCeEEe
Q 003131          557 IFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIK  636 (845)
Q Consensus       557 ~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~~~~~gilvk  636 (845)
                      ++..+++++++..+.++++.+              ..  .++.+++++++++|||+|+.++|.....++.+++|+|+++|
T Consensus       224 ~l~~i~l~~~~~~~~~~~~~g--------------~~--~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk  287 (679)
T PRK01122        224 GLTIIFLLVVATLPPFAAYSG--------------GA--LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIAT  287 (679)
T ss_pred             hhhHHHHHHHHHHHHHHHHhC--------------ch--HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeec
Confidence            665444433332222211111              12  26788899999999999999999999999999999999999


Q ss_pred             cchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCChhhHHHHHhhhhccCCChhHHHHHHHHhhc-CcCCCCCCCC
Q 003131          637 GGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHF-HFFDDPSLNP  715 (845)
Q Consensus       637 ~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~s~~p~~~al~~~~~~~-~~~~~~~~~~  715 (845)
                      +++++|.+|++|++|||||||||+|+|.+.++++.++.+.++++.+++.++..+.||.++||+++++.. +. ...    
T Consensus       288 ~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~~a~~~s~~s~hP~~~AIv~~a~~~~~~-~~~----  362 (679)
T PRK01122        288 SGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGVTEEELADAAQLSSLADETPEGRSIVVLAKQRFNL-RER----  362 (679)
T ss_pred             CchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCCCHHHHHHHHHHhcCCCCCchHHHHHHHHHhhcCC-Cch----
Confidence            999999999999999999999999999999998887777888999999999999999999999998762 11 000    


Q ss_pred             CCCCCccccCCCccccccccccccCCCceEE-EEcCeEEEEeehhh----hhhcCCCCChhhHHHHHHHHHccCeEEEEE
Q 003131          716 DGQSHSKESTGSGWLLDVSDFSALPGRGIQC-FISGKQVLVGNRKL----LNESGITIPDHVESFVVELEESARTGILVA  790 (845)
Q Consensus       716 ~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~-~~~g~~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~l~va  790 (845)
                       ..        .....+..+|+...+  ..+ .++|..+.+|+++.    +.+.+...|+++++..++++++|.|+++++
T Consensus       363 -~~--------~~~~~~~~pF~s~~~--~~gv~~~g~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va  431 (679)
T PRK01122        363 -DL--------QSLHATFVPFSAQTR--MSGVDLDGREIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVA  431 (679)
T ss_pred             -hh--------ccccceeEeecCcCc--eEEEEECCEEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEE
Confidence             00        001123345555432  222 35788899999864    444566667777777888999999999999


Q ss_pred             ECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 003131          791 YDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVID  845 (845)
Q Consensus       791 ~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~~  845 (845)
                      +|++++|+++++|++|||++++|++||++||+++|+||||+.||.+||+++||++
T Consensus       432 ~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~  486 (679)
T PRK01122        432 EDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD  486 (679)
T ss_pred             ECCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE
Confidence            9999999999999999999999999999999999999999999999999999974

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=100.00  E-value=1e-67  Score=604.49  Aligned_cols=403  Identities=39%  Similarity=0.608  Sum_probs=369.6

Q ss_pred             chHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecC
Q 003131          365 MDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDK  444 (845)
Q Consensus       365 md~L~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r  444 (845)
                      ||+|+++++..+|+++               .||+. ++++++++++++++.++++|+.+.+++|.++.|.+++++   |
T Consensus         1 ~~~l~~~a~~~~~~~~---------------~~~~~-~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~---r   61 (536)
T TIGR01512         1 VDLLMALAALGAVAIG---------------EYLEG-ALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVL---R   61 (536)
T ss_pred             CcHHHHHHHHHHHHHh---------------hHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEE---E
Confidence            7899999999888765               46665 778889999999999999999999999999999999999   7


Q ss_pred             CCceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEecceeeeccccCCcceeeeccCCCceeccceeecceEEEEEEEe
Q 003131          445 VGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKV  524 (845)
Q Consensus       445 ~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G~~~Vdes~LTGEs~pv~k~~~~~v~aGt~~~~g~~~~~v~~~  524 (845)
                      ||   +++++++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|++|+.+|+||.+.+|.++++|+++
T Consensus        62 ~g---~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~  138 (536)
T TIGR01512        62 GG---SLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKL  138 (536)
T ss_pred             CC---EEEEEEHHHCCCCCEEEEcCCCEeecceEEEeCcEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEe
Confidence            88   678999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCccHHHHHHHHHHhhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhh
Q 003131          525 GSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISV  604 (845)
Q Consensus       525 g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  604 (845)
                      |.+|.+|++.+++++++.+++|+++.+++++++|++++++++++++++|++..               .+..++.+++++
T Consensus       139 g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~sv  203 (536)
T TIGR01512       139 PADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK---------------RWPFWVYRALVL  203 (536)
T ss_pred             ccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------------ccHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998888876532               122378889999


Q ss_pred             heeecccccchhhHHHHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCChhhHHHHHh
Q 003131          605 VVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVA  684 (845)
Q Consensus       605 lv~~~P~~L~la~p~~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~  684 (845)
                      ++++|||+|++++|+++..++.+++|+||++|+++++|+++++|++|||||||||+|+|+|.++++      .+++.+++
T Consensus       204 lv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~------~~~l~~a~  277 (536)
T TIGR01512       204 LVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP------AEVLRLAA  277 (536)
T ss_pred             HhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH------HHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999999865      37899999


Q ss_pred             hhhccCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEEcCeEEEEeehhhhhhc
Q 003131          685 SAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNES  764 (845)
Q Consensus       685 ~~~~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~g~~~~~g~~~~~~~~  764 (845)
                      +++..+.||+++||++++++..                         .+.++++.+|+|+.+.++|.++.+|+++++.+.
T Consensus       278 ~~e~~~~hp~~~Ai~~~~~~~~-------------------------~~~~~~~~~g~gi~~~~~g~~~~ig~~~~~~~~  332 (536)
T TIGR01512       278 AAEQASSHPLARAIVDYARKRE-------------------------NVESVEEVPGEGVRAVVDGGEVRIGNPRSLEAA  332 (536)
T ss_pred             HHhccCCCcHHHHHHHHHHhcC-------------------------CCcceEEecCCeEEEEECCeEEEEcCHHHHhhc
Confidence            9999999999999999987641                         223456778999999999999999999988765


Q ss_pred             CCCCChhhHHHHHHHHHccCeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHcCC
Q 003131          765 GITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGV-RPVMVTGDNWRTAHAVAREVCV  843 (845)
Q Consensus       765 ~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi-~v~mlTGD~~~tA~~iA~~~GI  843 (845)
                      +..          .+..+|.+++++++|+.++|.+.++|++||+++++|++|+++|+ ++.|+|||+..+|.++++++||
T Consensus       333 ~~~----------~~~~~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi  402 (536)
T TIGR01512       333 VGA----------RPESAGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGI  402 (536)
T ss_pred             CCc----------chhhCCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCC
Confidence            432          34567889999999999999999999999999999999999999 9999999999999999999998


Q ss_pred             CC
Q 003131          844 ID  845 (845)
Q Consensus       844 ~~  845 (845)
                      ++
T Consensus       403 ~~  404 (536)
T TIGR01512       403 DE  404 (536)
T ss_pred             hh
Confidence            63

.

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=100.00  E-value=2.7e-66  Score=589.26  Aligned_cols=413  Identities=26%  Similarity=0.355  Sum_probs=343.4

Q ss_pred             chhhhHHH--HHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCe-EEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCc
Q 003131          396 TYFETSAM--LITFVLFGKYLEILAKGKTSDAIKKLVELAPAT-ALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTK  472 (845)
Q Consensus       396 ~~~~~~~~--i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~-~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~  472 (845)
                      .||+.++.  +++.++++.++|.+++.|+++++++|.++.|+. +++++  +||   ++++|++++|+|||+|.|++||+
T Consensus        63 ~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~vlr--~dg---~~~~V~~~~L~~GDiV~V~~Gd~  137 (675)
T TIGR01497        63 ALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLR--DDG---AIDKVPADQLKKGDIVLVEAGDV  137 (675)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEe--eCC---EEEEEEHHHCCCCCEEEECCCCE
Confidence            46665433  333468999999999999999999999998874 77762  367   67899999999999999999999


Q ss_pred             cCccEEEEecceeeeccccCCcceeeeccCCCc---eeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCChhhH
Q 003131          473 LPADGIVVWGTSYVNESMVTGEAVPVLKEINSP---VIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQK  549 (845)
Q Consensus       473 vPaDg~ll~G~~~Vdes~LTGEs~pv~k~~~~~---v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~  549 (845)
                      ||+||+|++|++.||||+|||||.|+.|++|+.   |++||.+.+|+++++|+++|.+|++++|.+++++++.+|+|+|.
T Consensus       138 IPaDG~vieG~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~  217 (675)
T TIGR01497       138 IPCDGEVIEGVASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEI  217 (675)
T ss_pred             EeeeEEEEEccEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHH
Confidence            999999999999999999999999999999975   99999999999999999999999999999999999999999998


Q ss_pred             HHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHHHHHH
Q 003131          550 FADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGA  629 (845)
Q Consensus       550 ~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~~~  629 (845)
                      ..+.+..++..+++ ++.  +.+|.+..+ .            ....++..++++++++|||+|+...|.....++.+++
T Consensus       218 ~l~~l~~~l~~v~l-i~~--~~~~~~~~~-~------------~~~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~a  281 (675)
T TIGR01497       218 ALTILLIALTLVFL-LVT--ATLWPFAAY-G------------GNAISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVL  281 (675)
T ss_pred             HHHHHHHHHHHHHH-HHH--HHHHHHHHh-c------------ChhHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHH
Confidence            77776654443322 222  222332111 0            1123567779999999999999988988889999999


Q ss_pred             hcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCChhhHHHHHhhhhccCCChhHHHHHHHHhhcCcCC
Q 003131          630 NNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFD  709 (845)
Q Consensus       630 ~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~s~~p~~~al~~~~~~~~~~~  709 (845)
                      |+|+++|+++++|.+|++|++|||||||||+|+|++.++++.++.+.++++.+++.++..++||.++|++++++..+...
T Consensus       282 r~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~~aa~~~~~s~hP~a~Aiv~~a~~~~~~~  361 (675)
T TIGR01497       282 GFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGVDEKTLADAAQLASLADDTPEGKSIVILAKQLGIRE  361 (675)
T ss_pred             HCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCCcHHHHHHHHHHhcCCCCCcHHHHHHHHHHHcCCCc
Confidence            99999999999999999999999999999999999999988777778889999999999999999999999987653210


Q ss_pred             CCCCCCCCCCCccccCCCccccccccccccCCCceEEE--EcCeEEEEeehhh----hhhcCCCCChhhHHHHHHHHHcc
Q 003131          710 DPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCF--ISGKQVLVGNRKL----LNESGITIPDHVESFVVELEESA  783 (845)
Q Consensus       710 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~--~~g~~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~g  783 (845)
                      ..      .        .....+..+|+...  ++.+.  .+|..+.+|+++.    +..++...|.++++..++++++|
T Consensus       362 ~~------~--------~~~~~~~~pf~~~~--~~sg~~~~~g~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G  425 (675)
T TIGR01497       362 DD------V--------QSLHATFVEFTAQT--RMSGINLDNGRMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQG  425 (675)
T ss_pred             cc------c--------ccccceEEEEcCCC--cEEEEEEeCCeEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCC
Confidence            00      0        00112233444432  33332  4788899999854    44556667777777788899999


Q ss_pred             CeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 003131          784 RTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVID  845 (845)
Q Consensus       784 ~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~~  845 (845)
                      .|++++++|++++|+++++|++|||++++|++||++||+++|+||||+.||.++|+++||++
T Consensus       426 ~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~  487 (675)
T TIGR01497       426 GTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD  487 (675)
T ss_pred             CeEEEEEECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE
Confidence            99999999999999999999999999999999999999999999999999999999999963

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=100.00  E-value=1.8e-65  Score=583.62  Aligned_cols=399  Identities=25%  Similarity=0.339  Sum_probs=329.8

Q ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHccCCC-eEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEeccee
Q 003131          407 FVLFGKYLEILAKGKTSDAIKKLVELAPA-TALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSY  485 (845)
Q Consensus       407 ~~~~~~~l~~~~~~k~~~~l~~l~~~~~~-~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G~~~  485 (845)
                      .++++.++|.++++|+++++++|.++.|+ +++++.  |||   ++++|++++|+|||+|.|++||+|||||+|++|.+.
T Consensus        75 ~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~~v~--rdg---~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~~  149 (673)
T PRK14010         75 TLVFANFSEALAEGRGKAQANALRQTQTEMKARRIK--QDG---SYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLAT  149 (673)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEE--eCC---EEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcceE
Confidence            44689999999999999999999999987 776432  678   678999999999999999999999999999999999


Q ss_pred             eeccccCCcceeeeccCC---CceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCChhhHHHHHHhhhHHHHH
Q 003131          486 VNESMVTGEAVPVLKEIN---SPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIV  562 (845)
Q Consensus       486 Vdes~LTGEs~pv~k~~~---~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  562 (845)
                      ||||+|||||.|+.|++|   +.||+||.+.+|+++++|+++|.+|+++||.+++++++.+|+|+|.....+...     
T Consensus       150 VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~-----  224 (673)
T PRK14010        150 VDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMT-----  224 (673)
T ss_pred             EecchhcCCCCceeccCCCccCeeecCceeecceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHH-----
Confidence            999999999999999999   889999999999999999999999999999999999999999999655443322     


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHHHHHHhcCeEEecchHHH
Q 003131          563 VTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALE  642 (845)
Q Consensus       563 ~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~~~~~gilvk~~~~~e  642 (845)
                      +.+.++++++|++...  .         ...+...+...+++++.++||+|+.++|++...++.+++|+|+++|+++++|
T Consensus       225 l~ii~l~~~~~~~~~~--~---------~~~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE  293 (673)
T PRK14010        225 LTIIFLVVILTMYPLA--K---------FLNFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVE  293 (673)
T ss_pred             HhHHHHHHHHHHHHHH--h---------hccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHH
Confidence            2222222223322100  0         0123345667777777889999999999999999999999999999999999


Q ss_pred             hhcCCcEEEecCCCccccCCeEEEEEEeccCCChhhHHHHHhhhhccCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCcc
Q 003131          643 RAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSK  722 (845)
Q Consensus       643 ~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~  722 (845)
                      .+|++|++|||||||||+|++.+.++.+..+.+.++++..++.++..+.||+++|++++++..+.. ..           
T Consensus       294 ~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~~~~~ll~~a~~~~~~s~~P~~~AIv~~a~~~~~~-~~-----------  361 (673)
T PRK14010        294 TCGDVNVLILDKTGTITYGNRMADAFIPVKSSSFERLVKAAYESSIADDTPEGRSIVKLAYKQHID-LP-----------  361 (673)
T ss_pred             HhhCCCEEEEeCCCcCCCCCeEEEEEEeCCCccHHHHHHHHHHhcCCCCChHHHHHHHHHHHcCCC-ch-----------
Confidence            999999999999999999999888877766666677888888888899999999999998765320 00           


Q ss_pred             ccCCCccccccccccccC-CCceEEEEcCeEEEEeehhhhh----hcCCCCChhhHHHHHHHHHccCeEEEEEECCeEEE
Q 003131          723 ESTGSGWLLDVSDFSALP-GRGIQCFISGKQVLVGNRKLLN----ESGITIPDHVESFVVELEESARTGILVAYDDNLIG  797 (845)
Q Consensus       723 ~~~~~~~~~~~~~~~~~~-g~gi~~~~~g~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~lG  797 (845)
                           ....+..+|+... +.|+.  ++|..+.+|+++++.    +.+...|.++++..++++++|+|+++++.|++++|
T Consensus       362 -----~~~~~~~pF~~~~k~~gv~--~~g~~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~~~~~~lG  434 (673)
T PRK14010        362 -----QEVGEYIPFTAETRMSGVK--FTTREVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLEDNEILG  434 (673)
T ss_pred             -----hhhcceeccccccceeEEE--ECCEEEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEEECCEEEE
Confidence                 0001223454332 34443  577888899998774    23444566666777788999999999999999999


Q ss_pred             EEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 003131          798 VMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVID  845 (845)
Q Consensus       798 ~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~~  845 (845)
                      +++|+||+|||++++|++||++||+++|+||||+.||.+||+++||++
T Consensus       435 ~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~  482 (673)
T PRK14010        435 VIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR  482 (673)
T ss_pred             EEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce
Confidence            999999999999999999999999999999999999999999999963

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=100.00  E-value=3e-65  Score=609.94  Aligned_cols=416  Identities=20%  Similarity=0.223  Sum_probs=338.0

Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCce---eeeEEeecCCcCCCCEEEEcCCCc
Q 003131          396 TYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKC---IEEREIDALLIQSGDTLKVLPGTK  472 (845)
Q Consensus       396 ~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~---~~~~~i~~~~l~~GDii~v~~G~~  472 (845)
                      .|. .+++++++++++.+++.++++|+.+.+++|.++.|.+++|+   |||+.   .++++|++++|+|||+|.|++||+
T Consensus       121 ~~~-~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~Vi---R~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~  196 (902)
T PRK10517        121 DLF-AAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVL---RVINDKGENGWLEIPIDQLVPGDIIKLAAGDM  196 (902)
T ss_pred             cHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE---ECCccCCCCeEEEEEHHhCCCCCEEEECCCCE
Confidence            344 46677788899999999999999999999999999999999   66210   167899999999999999999999


Q ss_pred             cCccEEEEecce-eeeccccCCcceeeeccCCC-------------ceeccceeecceEEEEEEEecCccHHHHHHHHHH
Q 003131          473 LPADGIVVWGTS-YVNESMVTGEAVPVLKEINS-------------PVIGGTINLHGVLHIQATKVGSDAVLSQIISLVE  538 (845)
Q Consensus       473 vPaDg~ll~G~~-~Vdes~LTGEs~pv~k~~~~-------------~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~  538 (845)
                      |||||+|++|+. .||||+|||||.|+.|.+++             .+|+||.+.+|.++++|++||.+|.+|+|.++++
T Consensus       197 IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~  276 (902)
T PRK10517        197 IPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVS  276 (902)
T ss_pred             EeeeEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhh
Confidence            999999999986 69999999999999998874             6999999999999999999999999999999999


Q ss_pred             hhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhH
Q 003131          539 TAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATP  618 (845)
Q Consensus       539 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p  618 (845)
                      +++.+++|+|+.++++++++.+++++++.++++++.+..              .+|..++.+++++++++|||+||++++
T Consensus       277 ~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~--------------~~~~~~l~~alsv~V~~~Pe~LP~~vt  342 (902)
T PRK10517        277 EQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTK--------------GDWWEAALFALSVAVGLTPEMLPMIVT  342 (902)
T ss_pred             ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhc--------------CCHHHHHHHHHHHHHHHcccHHHHHHH
Confidence            998899999999999999999988888887776654421              257778999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCChhhHHHHHhhh---hccCCChhH
Q 003131          619 TAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASA---EASSEHPLA  695 (845)
Q Consensus       619 ~~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~s~~p~~  695 (845)
                      ++++.+..+|+|+|+++|+++++|++|++|++|||||||||+|+|.|.++....+.+.++++.+++..   +...+||++
T Consensus       343 ~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~~~~~ll~~a~l~~~~~~~~~~p~d  422 (902)
T PRK10517        343 STLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLHSAWLNSHYQTGLKNLLD  422 (902)
T ss_pred             HHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCCCCHHHHHHHHHhcCCcCCCCCCHHH
Confidence            99999999999999999999999999999999999999999999999987654444556677765542   233589999


Q ss_pred             HHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEEc---Ce--EEEEeehhhhhhc------
Q 003131          696 KAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFIS---GK--QVLVGNRKLLNES------  764 (845)
Q Consensus       696 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~---g~--~~~~g~~~~~~~~------  764 (845)
                      .|+++++......   .. ..          ........+|++... ++.+.++   +.  .+..|+++.+.+.      
T Consensus       423 ~All~~a~~~~~~---~~-~~----------~~~~~~~~pFds~~k-~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~  487 (902)
T PRK10517        423 TAVLEGVDEESAR---SL-AS----------RWQKIDEIPFDFERR-RMSVVVAENTEHHQLICKGALEEILNVCSQVRH  487 (902)
T ss_pred             HHHHHHHHhcchh---hh-hh----------cCceEEEeeeCCCcc-eEEEEEEECCCeEEEEEeCchHHHHHhchhhhc
Confidence            9999987653200   00 00          000011123333322 2232221   21  3445666544322      


Q ss_pred             -CC--CCCh----hhHHHHHHHHHccCeEEEEEE----------------CCeEEEEEEeeCCCChhHHHHHHHHHhCCC
Q 003131          765 -GI--TIPD----HVESFVVELEESARTGILVAY----------------DDNLIGVMGIADPVKREAAVVVEGLLKMGV  821 (845)
Q Consensus       765 -~~--~~~~----~~~~~~~~~~~~g~~~l~va~----------------~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi  821 (845)
                       +.  +..+    ++.+..++++.+|+|++++||                |++|+|+++|+||+|||++++|++||++||
T Consensus       488 ~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI  567 (902)
T PRK10517        488 NGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGV  567 (902)
T ss_pred             CCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCC
Confidence             21  1222    233445678899999999997                568999999999999999999999999999


Q ss_pred             eEEEEcCCCHHHHHHHHHHcCCC
Q 003131          822 RPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       822 ~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +++|+||||+.||.+||+++||.
T Consensus       568 ~v~miTGD~~~tA~~IA~~lGI~  590 (902)
T PRK10517        568 TVKILTGDSELVAAKVCHEVGLD  590 (902)
T ss_pred             EEEEEcCCCHHHHHHHHHHcCCC
Confidence            99999999999999999999995

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=100.00  E-value=2e-64  Score=603.72  Aligned_cols=409  Identities=19%  Similarity=0.238  Sum_probs=337.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecC------CCceeeeEEeecCCcCCCCEEEEcCCCcc
Q 003131          400 TSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDK------VGKCIEEREIDALLIQSGDTLKVLPGTKL  473 (845)
Q Consensus       400 ~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r------~g~~~~~~~i~~~~l~~GDii~v~~G~~v  473 (845)
                      .+++++++++++.+++.++++|+++++++|.++.+..++|+   |      ||   ++++|++++|+|||+|.|++||+|
T Consensus        90 ~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~---R~~~~~~dg---~~~~I~~~eLv~GDiV~l~~Gd~V  163 (867)
T TIGR01524        90 ATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVL---RVINENGNG---SMDEVPIDALVPGDLIELAAGDII  163 (867)
T ss_pred             HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEE---EecccCCCC---eEEEEEhhcCCCCCEEEECCCCEE
Confidence            46667777888899999999999999999999999999998   6      77   679999999999999999999999


Q ss_pred             CccEEEEecce-eeeccccCCcceeeeccCCC-------------ceeccceeecceEEEEEEEecCccHHHHHHHHHHh
Q 003131          474 PADGIVVWGTS-YVNESMVTGEAVPVLKEINS-------------PVIGGTINLHGVLHIQATKVGSDAVLSQIISLVET  539 (845)
Q Consensus       474 PaDg~ll~G~~-~Vdes~LTGEs~pv~k~~~~-------------~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~  539 (845)
                      ||||+|++|+. .||||+|||||.|+.|.+++             .+|+||.+.+|.++++|++||.+|.+|+|.+++++
T Consensus       164 PaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~  243 (867)
T TIGR01524       164 PADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE  243 (867)
T ss_pred             cccEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC
Confidence            99999999986 69999999999999998864             59999999999999999999999999999999988


Q ss_pred             hhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHH
Q 003131          540 AQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPT  619 (845)
Q Consensus       540 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~  619 (845)
                       ..+++|+|+.++++++++.+++++++++++++|.+..              .+|..++.+++++++++|||+||+++|+
T Consensus       244 -~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~--------------~~~~~~~~~al~l~v~~iP~~Lp~~vt~  308 (867)
T TIGR01524       244 -RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMK--------------GDWLEAFLFALAVAVGLTPEMLPMIVSS  308 (867)
T ss_pred             -CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhc--------------CCHHHHHHHHHHHHHHhCcchHHHHHHH
Confidence             6678999999999999999999988888777665421              2467789999999999999999999999


Q ss_pred             HHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCChhhHHHHHhh---hhccCCChhHH
Q 003131          620 AVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVAS---AEASSEHPLAK  696 (845)
Q Consensus       620 ~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~s~~p~~~  696 (845)
                      +++.+..+|+|+|+++|+++++|.||++|++|||||||||+|+|+|.+++...+.+.++++.+++.   .+..++||++.
T Consensus       309 ~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~a~l~~~~~~~~~~p~~~  388 (867)
T TIGR01524       309 NLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGETSERVLKMAWLNSYFQTGWKNVLDH  388 (867)
T ss_pred             HHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCCCHHHHHHHHHHhCCCCCCCCChHHH
Confidence            999999999999999999999999999999999999999999999999876555556667766553   22345799999


Q ss_pred             HHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEEcC-----eEEEEeehhhhhhcC------
Q 003131          697 AVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISG-----KQVLVGNRKLLNESG------  765 (845)
Q Consensus       697 al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~g-----~~~~~g~~~~~~~~~------  765 (845)
                      |+++++......    ....          ........+|++.. +++.+.+++     ..+..|+++.+...+      
T Consensus       389 Al~~~~~~~~~~----~~~~----------~~~~~~~~pF~s~~-k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~  453 (867)
T TIGR01524       389 AVLAKLDESAAR----QTAS----------RWKKVDEIPFDFDR-RRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFG  453 (867)
T ss_pred             HHHHHHHhhchh----hHhh----------cCceEEEeccCCCc-CEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcC
Confidence            999988643100    0000          00011122344432 344444432     135567766553322      


Q ss_pred             -C--CCC----hhhHHHHHHHHHccCeEEEEEE----------------CCeEEEEEEeeCCCChhHHHHHHHHHhCCCe
Q 003131          766 -I--TIP----DHVESFVVELEESARTGILVAY----------------DDNLIGVMGIADPVKREAAVVVEGLLKMGVR  822 (845)
Q Consensus       766 -~--~~~----~~~~~~~~~~~~~g~~~l~va~----------------~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~  822 (845)
                       .  ...    +++++..++++.+|+|++++|+                |++|+|+++|+||+|+|++++|++||++||+
T Consensus       454 ~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~  533 (867)
T TIGR01524       454 GAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGIN  533 (867)
T ss_pred             CceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCE
Confidence             1  111    2344556778899999999998                2379999999999999999999999999999


Q ss_pred             EEEEcCCCHHHHHHHHHHcCCC
Q 003131          823 PVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       823 v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      ++|+||||+.||.+||+++||.
T Consensus       534 vvmiTGD~~~tA~aIA~~lGI~  555 (867)
T TIGR01524       534 VKVLTGDNEIVTARICQEVGID  555 (867)
T ss_pred             EEEEcCCCHHHHHHHHHHcCCC
Confidence            9999999999999999999996

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=100.00  E-value=1.5e-63  Score=596.53  Aligned_cols=415  Identities=20%  Similarity=0.255  Sum_probs=332.5

Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCc---eeeeEEeecCCcCCCCEEEEcCCCc
Q 003131          396 TYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGK---CIEEREIDALLIQSGDTLKVLPGTK  472 (845)
Q Consensus       396 ~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~---~~~~~~i~~~~l~~GDii~v~~G~~  472 (845)
                      .|. .+++++++++++.+++.++++|+++++++|.++.|.+++|+   |||.   ..++++|++++|+|||+|.|++||+
T Consensus       110 ~~~-~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~---Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~  185 (903)
T PRK15122        110 DLT-GVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVL---RRGHAGAEPVRREIPMRELVPGDIVHLSAGDM  185 (903)
T ss_pred             cHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEE---ECCccCCCCeEEEEEHHHCCCCCEEEECCCCE
Confidence            344 46667788888999999999999999999999999999998   5531   0157899999999999999999999


Q ss_pred             cCccEEEEecce-eeeccccCCcceeeeccC-----------------------CCceeccceeecceEEEEEEEecCcc
Q 003131          473 LPADGIVVWGTS-YVNESMVTGEAVPVLKEI-----------------------NSPVIGGTINLHGVLHIQATKVGSDA  528 (845)
Q Consensus       473 vPaDg~ll~G~~-~Vdes~LTGEs~pv~k~~-----------------------~~~v~aGt~~~~g~~~~~v~~~g~~t  528 (845)
                      |||||+|++|+. .||||+|||||.|+.|.+                       ++.+|+||.+.+|.++++|++||.+|
T Consensus       186 IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T  265 (903)
T PRK15122        186 IPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRT  265 (903)
T ss_pred             EeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEecccc
Confidence            999999999986 699999999999999975                       26799999999999999999999999


Q ss_pred             HHHHHHHHHHhhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheee
Q 003131          529 VLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIA  608 (845)
Q Consensus       529 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~  608 (845)
                      .+|+|.+++.+ ...++|+++.++++++++..+.+.++.+++++.++.              ..+|..++.+++++++++
T Consensus       266 ~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~--------------~~~~~~~l~~aisl~V~~  330 (903)
T PRK15122        266 YFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT--------------KGDWLEALLFALAVAVGL  330 (903)
T ss_pred             HhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc--------------cCCHHHHHHHHHHHHHHH
Confidence            99999999987 556789999999999888777666665554433221              135778889999999999


Q ss_pred             cccccchhhHHHHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCChhhHHHHHhhh--
Q 003131          609 CPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASA--  686 (845)
Q Consensus       609 ~P~~L~la~p~~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~--  686 (845)
                      |||+||+++|++++.+..+|+|+|+++|+++++|.||++|++|||||||||+|+|.|.+++..++.+.++++.+++..  
T Consensus       331 ~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~~~~~~l~~a~l~s~  410 (903)
T PRK15122        331 TPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGRKDERVLQLAWLNSF  410 (903)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCCChHHHHHHHHHhCC
Confidence            999999999999999999999999999999999999999999999999999999999998876655556677665432  


Q ss_pred             -hccCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEE---cCeEE--EEeehhh
Q 003131          687 -EASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFI---SGKQV--LVGNRKL  760 (845)
Q Consensus       687 -~~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~---~g~~~--~~g~~~~  760 (845)
                       +..++||++.|+++++...+....    ..          ........+|++..++ +...+   +|..+  ..|+++.
T Consensus       411 ~~~~~~~p~e~All~~a~~~~~~~~----~~----------~~~~~~~~pF~s~~k~-ms~v~~~~~~~~~~~~KGa~e~  475 (903)
T PRK15122        411 HQSGMKNLMDQAVVAFAEGNPEIVK----PA----------GYRKVDELPFDFVRRR-LSVVVEDAQGQHLLICKGAVEE  475 (903)
T ss_pred             CCCCCCChHHHHHHHHHHHcCchhh----hh----------cCceEEEeeeCCCcCE-EEEEEEcCCCcEEEEECCcHHH
Confidence             334689999999999876532100    00          0001112234443332 11111   34433  3377664


Q ss_pred             hhh-------cCC--CCCh----hhHHHHHHHHHccCeEEEEEE------------------CCeEEEEEEeeCCCChhH
Q 003131          761 LNE-------SGI--TIPD----HVESFVVELEESARTGILVAY------------------DDNLIGVMGIADPVKREA  809 (845)
Q Consensus       761 ~~~-------~~~--~~~~----~~~~~~~~~~~~g~~~l~va~------------------~~~~lG~~~~~D~lr~~~  809 (845)
                      +..       ++.  ++++    .+.+..++++.+|+|++++||                  |++|+|+++|+||+|||+
T Consensus       476 il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a  555 (903)
T PRK15122        476 MLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESA  555 (903)
T ss_pred             HHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHH
Confidence            432       222  2222    234456678899999999996                  348999999999999999


Q ss_pred             HHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          810 AVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       810 ~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +++|++||++||+++|+||||+.||.+||+++||.
T Consensus       556 ~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~  590 (903)
T PRK15122        556 APAIAALRENGVAVKVLTGDNPIVTAKICREVGLE  590 (903)
T ss_pred             HHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999995

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=100.00  E-value=5.8e-63  Score=595.23  Aligned_cols=408  Identities=22%  Similarity=0.287  Sum_probs=321.1

Q ss_pred             HHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEec
Q 003131          403 MLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWG  482 (845)
Q Consensus       403 ~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G  482 (845)
                      .+++++++...+..++++|+++.+++|.++.|.+++|+   |||   ++++|++++|+|||+|.|++||+|||||+|++|
T Consensus        85 ~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~Vi---Rdg---~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g  158 (884)
T TIGR01522        85 SITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLI---REG---KLEHVLASTLVPGDLVCLSVGDRVPADLRIVEA  158 (884)
T ss_pred             HHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEE---ECC---EEEEEEHHHCccCCEEEecCCCEEeeeEEEEEc
Confidence            33344444556666777788899999999999999999   888   779999999999999999999999999999999


Q ss_pred             c-eeeeccccCCcceeeeccCCC--------------ceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCChh
Q 003131          483 T-SYVNESMVTGEAVPVLKEINS--------------PVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPI  547 (845)
Q Consensus       483 ~-~~Vdes~LTGEs~pv~k~~~~--------------~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~  547 (845)
                      + ..||||+|||||.|+.|.+++              .+|+||.+.+|.++++|++||.+|.+|+|.+++++++.+++|+
T Consensus       159 ~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~l  238 (884)
T TIGR01522       159 VDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPL  238 (884)
T ss_pred             CceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCCCcH
Confidence            6 679999999999999998864              7999999999999999999999999999999999999899999


Q ss_pred             hHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHHHH
Q 003131          548 QKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGV  627 (845)
Q Consensus       548 ~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~  627 (845)
                      |+.++++++++.++++++++++++++++.              ..+|..++.+++++++++|||+||+++|++++.++++
T Consensus       239 q~~l~~l~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r  304 (884)
T TIGR01522       239 QKSMDLLGKQLSLVSFGVIGVICLVGWFQ--------------GKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLR  304 (884)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------------cCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH
Confidence            99999999999887766655555443322              1357788999999999999999999999999999999


Q ss_pred             HHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCC----------------------------hhhH
Q 003131          628 GANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMD----------------------------RGEF  679 (845)
Q Consensus       628 ~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~----------------------------~~~~  679 (845)
                      |+|+|+++|+++++|.||++|++|||||||||+|+|+|.+++..++..                            ..++
T Consensus       305 ~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (884)
T TIGR01522       305 MSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRI  384 (884)
T ss_pred             HhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHH
Confidence            999999999999999999999999999999999999999987643210                            0233


Q ss_pred             HHHHhhhhcc---------CCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCC---------
Q 003131          680 LTLVASAEAS---------SEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPG---------  741 (845)
Q Consensus       680 ~~~~~~~~~~---------s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---------  741 (845)
                      +..++.+...         .+||++.|+++++...+... ..   ..          .......+|++..+         
T Consensus       385 l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~-~~---~~----------~~~~~~~pF~s~~k~m~v~~~~~  450 (884)
T TIGR01522       385 LEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDD-LR---ET----------YIRVAEVPFSSERKWMAVKCVHR  450 (884)
T ss_pred             HHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcCcHh-HH---hh----------CcEEeEeCCCCCCCeEEEEEEEc
Confidence            4333322211         24699999999987654210 00   00          00111223332221         


Q ss_pred             --CceEEEEcCe--EEEEeehhhhhhcCCC--CCh----hhHHHHHHHHHccCeEEEEEECC-----eEEEEEEeeCCCC
Q 003131          742 --RGIQCFISGK--QVLVGNRKLLNESGIT--IPD----HVESFVVELEESARTGILVAYDD-----NLIGVMGIADPVK  806 (845)
Q Consensus       742 --~gi~~~~~g~--~~~~g~~~~~~~~~~~--~~~----~~~~~~~~~~~~g~~~l~va~~~-----~~lG~~~~~D~lr  806 (845)
                        .+...++||+  .++.++..++..+|..  +++    .+.+..++++.+|+|++++||+.     +|+|+++|+||+|
T Consensus       451 ~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r  530 (884)
T TIGR01522       451 QDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPR  530 (884)
T ss_pred             CCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcch
Confidence              2233444444  1111222222222322  222    23455667889999999999965     8999999999999


Q ss_pred             hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          807 REAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       807 ~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      ++++++|+.||++||+++|+|||++.||.++|+++||.
T Consensus       531 ~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~  568 (884)
T TIGR01522       531 PGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMP  568 (884)
T ss_pred             hHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999999996

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=5.5e-63  Score=539.62  Aligned_cols=466  Identities=23%  Similarity=0.322  Sum_probs=352.0

Q ss_pred             hHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhhHHHHHHHHH--HHHHHHHHHhhhHHHH
Q 003131          348 KRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVL--FGKYLEILAKGKTSDA  425 (845)
Q Consensus       348 ~~~~~~a~~~l~~~~~~md~L~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~~k~~~~  425 (845)
                      +.|++--|++++..     +|+.|...+     ++++.+++..++....|++.+++++.+++  +-..+..|.   .+.+
T Consensus       143 K~Fl~fvweA~qD~-----TLiIL~vaA-----vvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~---qe~Q  209 (1034)
T KOG0204|consen  143 KGFLRFVWEALQDV-----TLIILMVAA-----VVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYR---QELQ  209 (1034)
T ss_pred             ccHHHHHHHHhccc-----hHHHHHHHH-----HHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhH---Hhhh
Confidence            44556668888866     444333222     22333444444556788988777665432  222333343   3444


Q ss_pred             HHHHHccC-CCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEeccee-eeccccCCcceeeeccC-
Q 003131          426 IKKLVELA-PATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSY-VNESMVTGEAVPVLKEI-  502 (845)
Q Consensus       426 l~~l~~~~-~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G~~~-Vdes~LTGEs~pv~k~~-  502 (845)
                      +++|.+.. ..+..|+   |||   +.++|++.||+||||+.|+.||.|||||++++|+.+ +|||++||||.++.|.. 
T Consensus       210 F~~L~~~k~~~k~~Vi---R~G---~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~  283 (1034)
T KOG0204|consen  210 FRKLQKEKRNIKFQVI---RGG---RRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLD  283 (1034)
T ss_pred             hhhhhhhhhceEEEEE---ECC---EEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCC
Confidence            44444333 3356777   888   779999999999999999999999999999999877 99999999999999976 


Q ss_pred             -CCceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCC
Q 003131          503 -NSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGA  581 (845)
Q Consensus       503 -~~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~  581 (845)
                       +.++++||.+.+|.+++.|+.+|.+|..|+++.++.+...+++|+|-++++++.....+.+++|++++++.......+.
T Consensus       284 ~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~  363 (1034)
T KOG0204|consen  284 KDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGK  363 (1034)
T ss_pred             CCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhee
Confidence             5679999999999999999999999999999999999998999999999999999999999999998887655444332


Q ss_pred             CC------CCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCC
Q 003131          582 YP------EQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKT  655 (845)
Q Consensus       582 ~~------~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKT  655 (845)
                      +.      ..|.+.....+...|..++.++|+++|++||||++++++.++++|.+.+.++|..+++|++|..++||.|||
T Consensus       364 ~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKT  443 (1034)
T KOG0204|consen  364 TKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKT  443 (1034)
T ss_pred             eecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCc
Confidence            21      233333455688889999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCeEEEEEEeccCCCh----------hhHHHHH-hh-----------------hhccCCChhHHHHHHHHhhcCc
Q 003131          656 GTLTQGRATVTTAKVFTKMDR----------GEFLTLV-AS-----------------AEASSEHPLAKAVVEYARHFHF  707 (845)
Q Consensus       656 GTLT~~~~~v~~~~~~~~~~~----------~~~~~~~-~~-----------------~~~~s~~p~~~al~~~~~~~~~  707 (845)
                      ||||+|+|.|.+.+..++..+          ..+..+. ..                 .....++|.++||+.+....+.
T Consensus       444 GTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~  523 (1034)
T KOG0204|consen  444 GTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGM  523 (1034)
T ss_pred             CceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCc
Confidence            999999999999876532211          1112111 11                 1223578999999999987753


Q ss_pred             CCCCCCCCCCCCCccccCCCccccccccccccCCC----------ceEEEEcCe-EEEEeehh-hhhhcCCCC------C
Q 003131          708 FDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGR----------GIQCFISGK-QVLVGNRK-LLNESGITI------P  769 (845)
Q Consensus       708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~----------gi~~~~~g~-~~~~g~~~-~~~~~~~~~------~  769 (845)
                      -.+....            ...+..+.+|.+..++          +-..++||+ ++.+.+++ ++..+|...      .
T Consensus       524 ~~~~~R~------------e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~  591 (1034)
T KOG0204|consen  524 DFQDVRP------------EEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDR  591 (1034)
T ss_pred             chHhhcc------------hhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHH
Confidence            1111000            1223445555554332          312566665 33333333 333344321      1


Q ss_pred             hhhHHHHHHHHHccCeEEEEEE---------------------CCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcC
Q 003131          770 DHVESFVVELEESARTGILVAY---------------------DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTG  828 (845)
Q Consensus       770 ~~~~~~~~~~~~~g~~~l~va~---------------------~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTG  828 (845)
                      ..+++.++.++.+|+|++++||                     +++++|+++++||+|||++++|+.||+|||+|.|+||
T Consensus       592 ~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTG  671 (1034)
T KOG0204|consen  592 KSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTG  671 (1034)
T ss_pred             HHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeC
Confidence            2356778899999999999999                     2479999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHcCCC
Q 003131          829 DNWRTAHAVAREVCVI  844 (845)
Q Consensus       829 D~~~tA~~iA~~~GI~  844 (845)
                      ||..||++||.+|||.
T Consensus       672 DNI~TAkAIA~eCGIL  687 (1034)
T KOG0204|consen  672 DNINTAKAIARECGIL  687 (1034)
T ss_pred             CcHHHHHHHHHHcccc
Confidence            9999999999999996

>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=4.5e-63  Score=541.24  Aligned_cols=435  Identities=23%  Similarity=0.327  Sum_probs=329.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCccE
Q 003131          398 FETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADG  477 (845)
Q Consensus       398 ~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg  477 (845)
                      |+.+..|.+++.+......++++|+.+++++|.++.|+.++|+   |+|   +.+.+++.+|||||||.++-||+||||.
T Consensus        78 ~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~---R~g---k~~~i~A~eLVPGDiV~l~vGDkVPADl  151 (972)
T KOG0202|consen   78 FDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVL---RSG---KLQHILARELVPGDIVELKVGDKIPADL  151 (972)
T ss_pred             cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEE---ecC---cccceehhccCCCCEEEEecCCccccce
Confidence            3344555555566666777888899999999999999999999   888   6799999999999999999999999999


Q ss_pred             EEEeccee-eeccccCCcceeeeccC--------------CCceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhc
Q 003131          478 IVVWGTSY-VNESMVTGEAVPVLKEI--------------NSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQM  542 (845)
Q Consensus       478 ~ll~G~~~-Vdes~LTGEs~pv~k~~--------------~~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~  542 (845)
                      +|++-..+ ||||+|||||.|+.|..              .+.+|+||.+..|.++++|+.||.+|.+|+|.+.+++.+.
T Consensus       152 Rl~e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~  231 (972)
T KOG0202|consen  152 RLIEAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATES  231 (972)
T ss_pred             eEEeeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCC
Confidence            99998777 99999999999999943              2458999999999999999999999999999999999999


Q ss_pred             cCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCC--CCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHH
Q 003131          543 SKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGA--YPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTA  620 (845)
Q Consensus       543 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~  620 (845)
                      .|+|+|+.+|++.+.+..++.++++.+++..  .+.+..  ....|+    ..+...|.+++++.+.++|++||+.+++.
T Consensus       232 ~kTPLqk~ld~~G~qLs~~is~i~v~v~~~n--ig~f~~p~~~g~~f----k~~~~~f~IaVsLAVAAIPEGLPaVvT~t  305 (972)
T KOG0202|consen  232 PKTPLQKKLDEFGKQLSKVISFICVGVWLLN--IGHFLDPVHGGSWF----KGALYYFKIAVSLAVAAIPEGLPAVVTTT  305 (972)
T ss_pred             CCCcHHHHHHHHHHHHHHHheehhhhHHHhh--hhhhccccccccch----hchhhhhhHHHHHHHHhccCCCcchhhhh
Confidence            9999999999999999877666666555431  222110  011232    35778899999999999999999999999


Q ss_pred             HHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCC--------------------------
Q 003131          621 VMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKM--------------------------  674 (845)
Q Consensus       621 ~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~--------------------------  674 (845)
                      ++.|.++|+|+++++|+..++|+||.+++||+|||||||+|+|.+.+++..+..                          
T Consensus       306 LALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~  385 (972)
T KOG0202|consen  306 LALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLY  385 (972)
T ss_pred             HHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCcc
Confidence            999999999999999999999999999999999999999999999998875321                          


Q ss_pred             ------Ch---hhHHHHHhhh-----hcc-------CCChhHHHHHHHHhhcCcCCCCCCCCCCCCCcc-ccCC-Cc-cc
Q 003131          675 ------DR---GEFLTLVASA-----EAS-------SEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSK-ESTG-SG-WL  730 (845)
Q Consensus       675 ------~~---~~~~~~~~~~-----~~~-------s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~-~~  730 (845)
                            ..   .+++.+++.+     +..       .+.|.+.||...+++.++.+............. .+.. +. ..
T Consensus       386 ~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~  465 (972)
T KOG0202|consen  386 EKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKK  465 (972)
T ss_pred             ccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhh
Confidence                  01   1222322222     111       467999999999998876554311111100000 0000 00 00


Q ss_pred             cccccccccCC------------CceEEEEcCeE-EEEeeh-hhhhhcCCC---CC----hhhHHHHHHHHHccCeEEEE
Q 003131          731 LDVSDFSALPG------------RGIQCFISGKQ-VLVGNR-KLLNESGIT---IP----DHVESFVVELEESARTGILV  789 (845)
Q Consensus       731 ~~~~~~~~~~g------------~gi~~~~~g~~-~~~g~~-~~~~~~~~~---~~----~~~~~~~~~~~~~g~~~l~v  789 (845)
                      ....+|++..+            .+...++||+. -++..+ .+....|..   ..    +.+.+...++..+|+|++++
T Consensus       466 ~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLal  545 (972)
T KOG0202|consen  466 IAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLAL  545 (972)
T ss_pred             eeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEE
Confidence            01112332221            23455556551 111211 222222211   21    22344566788999999999


Q ss_pred             EE------------------------CCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          790 AY------------------------DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       790 a~------------------------~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      |+                        |++|+|++++.||+|+|++++|+.|+++||+|+|+||||++||.+||+++||.
T Consensus       546 A~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~  624 (972)
T KOG0202|consen  546 ASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIF  624 (972)
T ss_pred             EccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence            87                        56899999999999999999999999999999999999999999999999986

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=100.00  E-value=2.3e-61  Score=584.91  Aligned_cols=429  Identities=22%  Similarity=0.290  Sum_probs=324.3

Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHcc-CCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccC
Q 003131          396 TYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVEL-APATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLP  474 (845)
Q Consensus       396 ~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~-~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vP  474 (845)
                      .|++ ++++++++++...+..+++.++++++++|.+. .+..++|+   |||   ++++|++++|+|||+|.|++||+||
T Consensus       127 ~~~~-~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~Vi---RdG---~~~~I~~~~Lv~GDiV~l~~Gd~IP  199 (941)
T TIGR01517       127 GWIE-GVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVI---RGG---QEQQISIHDIVVGDIVSLSTGDVVP  199 (941)
T ss_pred             chHH-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEE---ECC---EEEEEeHHHCCCCCEEEECCCCEec
Confidence            3444 44444444455566666677777777777654 46688888   888   7799999999999999999999999


Q ss_pred             ccEEEEec-ceeeeccccCCcceeeeccCCCc--eeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCChhhHHH
Q 003131          475 ADGIVVWG-TSYVNESMVTGEAVPVLKEINSP--VIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFA  551 (845)
Q Consensus       475 aDg~ll~G-~~~Vdes~LTGEs~pv~k~~~~~--v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~  551 (845)
                      |||+|++| .+.||||+|||||.|+.|.+++.  +|+||.+.+|.++++|++||.+|.+||+.+++++++ +++|+++.+
T Consensus       200 aD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~-~~t~l~~~~  278 (941)
T TIGR01517       200 ADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEG-EDTPLQEKL  278 (941)
T ss_pred             ccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCC-CCCcHHHHH
Confidence            99999999 78899999999999999998876  999999999999999999999999999999998765 678999999


Q ss_pred             HHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCC--cCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHHHHHH
Q 003131          552 DFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQ--WLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGA  629 (845)
Q Consensus       552 ~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~~~  629 (845)
                      +++++++.+++++++++++++|++...+......  .......++..++.+++++++++|||+|++++|++++.++.+|+
T Consensus       279 ~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~ma  358 (941)
T TIGR01517       279 SELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMM  358 (941)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHH
Confidence            9999999999999888888877543211100000  00011235778899999999999999999999999999999999


Q ss_pred             hcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCC-C-----------hhhHHHHHhhhh----------
Q 003131          630 NNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKM-D-----------RGEFLTLVASAE----------  687 (845)
Q Consensus       630 ~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~-~-----------~~~~~~~~~~~~----------  687 (845)
                      |+|+++|+++++|.||++|++|||||||||+|+|.|.+++..++. +           ..+++..++.+.          
T Consensus       359 k~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~  438 (941)
T TIGR01517       359 KDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRG  438 (941)
T ss_pred             hCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCC
Confidence            999999999999999999999999999999999999998764321 0           011222222211          


Q ss_pred             ---ccCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCC-Cc---------eEEEEcCe-EE
Q 003131          688 ---ASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPG-RG---------IQCFISGK-QV  753 (845)
Q Consensus       688 ---~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~g---------i~~~~~g~-~~  753 (845)
                         ...+||++.|+++++.+.+..... . ..          ........+|++..+ .+         +..++||+ +.
T Consensus       439 ~~~~~~g~p~e~All~~~~~~~~~~~~-~-~~----------~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~  506 (941)
T TIGR01517       439 GKRAFIGSKTECALLGFLLLLGRDYQE-V-RA----------EEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEI  506 (941)
T ss_pred             CccccCCCccHHHHHHHHHHcCCCHHH-H-Hh----------hchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHH
Confidence               123678999999998765311000 0 00          001122234443222 22         34444444 22


Q ss_pred             EEeehhhh-hhcCCCCC-----hhhHHHHHHHHHccCeEEEEEE----------------CCeEEEEEEeeCCCChhHHH
Q 003131          754 LVGNRKLL-NESGITIP-----DHVESFVVELEESARTGILVAY----------------DDNLIGVMGIADPVKREAAV  811 (845)
Q Consensus       754 ~~g~~~~~-~~~~~~~~-----~~~~~~~~~~~~~g~~~l~va~----------------~~~~lG~~~~~D~lr~~~~~  811 (845)
                      +++.+..+ ..+|...+     +++++..++++.+|+|++++||                |++|+|+++|+||+|+|+++
T Consensus       507 il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~  586 (941)
T TIGR01517       507 VLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVRE  586 (941)
T ss_pred             HHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHH
Confidence            22333322 12333222     2345566788999999999997                34899999999999999999


Q ss_pred             HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          812 VVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       812 ~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +|++||++||+++|+||||+.||.+||+++||.
T Consensus       587 aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~  619 (941)
T TIGR01517       587 AVQECQRAGITVRMVTGDNIDTAKAIARNCGIL  619 (941)
T ss_pred             HHHHHHHCCCEEEEECCCChHHHHHHHHHcCCC
Confidence            999999999999999999999999999999996

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=100.00  E-value=2.2e-60  Score=543.40  Aligned_cols=379  Identities=31%  Similarity=0.476  Sum_probs=337.6

Q ss_pred             HHHHHHHHHHHHHHhhhHHHHHHHHHc--cCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEec
Q 003131          405 ITFVLFGKYLEILAKGKTSDAIKKLVE--LAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWG  482 (845)
Q Consensus       405 ~~~~~~~~~l~~~~~~k~~~~l~~l~~--~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G  482 (845)
                      +++++++.+++.+.++++.+.+++|.+  +.|..++++   |+|    +++|++++|+|||+|.+++||+|||||+|++|
T Consensus         3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~---r~g----~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g   75 (499)
T TIGR01494         3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVL---RNG----WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG   75 (499)
T ss_pred             EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEE---ECC----eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc
Confidence            345678999999999999999999998  899999998   666    47899999999999999999999999999999


Q ss_pred             ceeeeccccCCcceeeeccCCCceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCChhhHHHHHHh-hhHHHH
Q 003131          483 TSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVA-SIFVPI  561 (845)
Q Consensus       483 ~~~Vdes~LTGEs~pv~k~~~~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  561 (845)
                      .+.||||+|||||.|+.|.+|+.+++||.+.+|.++++|+++|.+|..+++..++.+++..++++++..++++ .+++++
T Consensus        76 ~~~vdes~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~  155 (499)
T TIGR01494        76 SCFVDESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILF  155 (499)
T ss_pred             cEEEEcccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999888999999999999 899999


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHHHHHHhcCeEEecchHH
Q 003131          562 VVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDAL  641 (845)
Q Consensus       562 ~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~~~~~gilvk~~~~~  641 (845)
                      +++++++++++|+.....           ..+|..++.+++++++++|||+|++++|+++..+..+++++|+++|+++++
T Consensus       156 ~~~la~~~~~~~~~~~~~-----------~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~l  224 (499)
T TIGR01494       156 VLLIALAVFLFWAIGLWD-----------PNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNAL  224 (499)
T ss_pred             HHHHHHHHHHHHHHHHcc-----------cccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhh
Confidence            999999999888654210           014778899999999999999999999999999999999999999999999


Q ss_pred             HhhcCCcEEEecCCCccccCCeEEEEEEeccCCChhhHHHHHhhhhccCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCc
Q 003131          642 ERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHS  721 (845)
Q Consensus       642 e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~  721 (845)
                      |.||++|++|||||||||+|+|++.++++.+.             +..++||+++|+++++++..               
T Consensus       225 E~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~-------------~~~s~hp~~~ai~~~~~~~~---------------  276 (499)
T TIGR01494       225 EELGKVDYICSDKTGTLTKNEMSFKKVSVLGG-------------EYLSGHPDERALVKSAKWKI---------------  276 (499)
T ss_pred             hhccCCcEEEeeCCCccccCceEEEEEEecCC-------------CcCCCChHHHHHHHHhhhcC---------------
Confidence            99999999999999999999999999876532             46789999999999886531               


Q ss_pred             cccCCCccccccccccccCCCceEEEEcC--eEEEEeehhhhhhcCCCCChhhHHHHHHHHHccCeEEEEEECCeEEEEE
Q 003131          722 KESTGSGWLLDVSDFSALPGRGIQCFISG--KQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVM  799 (845)
Q Consensus       722 ~~~~~~~~~~~~~~~~~~~g~gi~~~~~g--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~lG~~  799 (845)
                               ....+|++.+ +|+.+.+++  ..+.+|+++++.+.+..    +.+...++..+|.++++++++.+++|++
T Consensus       277 ---------~~~~~f~~~~-~~~~~~~~~~~~~~~~G~~~~i~~~~~~----~~~~~~~~~~~g~~~~~~a~~~~~~g~i  342 (499)
T TIGR01494       277 ---------LNVFEFSSVR-KRMSVIVRGPDGTYVKGAPEFVLSRVKD----LEEKVKELAQSGLRVLAVASKETLLGLL  342 (499)
T ss_pred             ---------cceeccCCCC-ceEEEEEecCCcEEEeCCHHHHHHhhHH----HHHHHHHHHhCCCEEEEEEECCeEEEEE
Confidence                     1233566666 577777764  57889999988664321    3334456778999999999999999999


Q ss_pred             EeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 003131          800 GIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCV  843 (845)
Q Consensus       800 ~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI  843 (845)
                      .++|++|++++++|+.|+++|++++|+|||++.+|.++|+++||
T Consensus       343 ~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi  386 (499)
T TIGR01494       343 GLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI  386 (499)
T ss_pred             EecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc
Confidence            99999999999999999999999999999999999999999997

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=1.6e-61  Score=579.91  Aligned_cols=413  Identities=23%  Similarity=0.320  Sum_probs=334.2

Q ss_pred             HHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEec
Q 003131          403 MLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWG  482 (845)
Q Consensus       403 ~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G  482 (845)
                      .+++++.++..+..+++.|+.+.+++|.++.+..++|+   |||   ++++|++++|+|||||.+++||+||||++|+++
T Consensus       108 ~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~---R~g---~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~  181 (917)
T COG0474         108 VILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVL---RDG---KFVEIPASELVPGDIVLLEAGDVVPADLRLLES  181 (917)
T ss_pred             eehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEE---eCC---cEEEecHHHCCCCcEEEECCCCccccceEEEEe
Confidence            33444455555666777788889999999999999999   888   789999999999999999999999999999999


Q ss_pred             ce-eeeccccCCcceeeeccC--------------CCceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCChh
Q 003131          483 TS-YVNESMVTGEAVPVLKEI--------------NSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPI  547 (845)
Q Consensus       483 ~~-~Vdes~LTGEs~pv~k~~--------------~~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~  547 (845)
                      ++ .||||+|||||.|+.|.+              .+.+|+||.+.+|++.+.|++||.+|.+|++..++......++|+
T Consensus       182 ~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l  261 (917)
T COG0474         182 SDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPL  261 (917)
T ss_pred             cCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcH
Confidence            99 699999999999999953              477899999999999999999999999999999998887789999


Q ss_pred             hHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHHHH
Q 003131          548 QKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGV  627 (845)
Q Consensus       548 ~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~  627 (845)
                      |+.++++..++..+.++++++++++.++.+.             ..|..++.+++++++.++|++||+.+.++++.+..+
T Consensus       262 ~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~-------------~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~  328 (917)
T COG0474         262 QRKLNKLGKFLLVLALVLGALVFVVGLFRGG-------------NGLLESFLTALALAVAAVPEGLPAVVTIALALGAQR  328 (917)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------------ccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Confidence            9999999999999999999988887744321             237889999999999999999999999999999999


Q ss_pred             HHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEecc-CCChh-----------hHHHHHhhh---hcc---
Q 003131          628 GANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFT-KMDRG-----------EFLTLVASA---EAS---  689 (845)
Q Consensus       628 ~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~-~~~~~-----------~~~~~~~~~---~~~---  689 (845)
                      |+++++++|+++++|.||++|+||+|||||||+|+|+|.+++..+ ..+.+           +++..++.+   ...   
T Consensus       329 mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~  408 (917)
T COG0474         329 MAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNG  408 (917)
T ss_pred             HHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccC
Confidence            999999999999999999999999999999999999999999884 21111           123322222   222   


Q ss_pred             ---CCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEE--cCe--EEEEeehhhhh
Q 003131          690 ---SEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFI--SGK--QVLVGNRKLLN  762 (845)
Q Consensus       690 ---s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~--~g~--~~~~g~~~~~~  762 (845)
                         .++|++.||++++.+.+...    .......      ........+|++..++.-...-  +|+  .+..|+++.+.
T Consensus       409 ~~~~gdptE~Al~~~a~~~~~~~----~~~~~~~------~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il  478 (917)
T COG0474         409 WYQAGDPTEGALVEFAEKLGFSL----DLSGLEV------EYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVIL  478 (917)
T ss_pred             ceecCCccHHHHHHHHHhcCCcC----CHHHHhh------hcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHH
Confidence               57999999999998875321    0000000      1122344566665544222221  121  34556666654


Q ss_pred             hcC------C----CCChhhHHHHHHHHHccCeEEEEEE-----------------CCeEEEEEEeeCCCChhHHHHHHH
Q 003131          763 ESG------I----TIPDHVESFVVELEESARTGILVAY-----------------DDNLIGVMGIADPVKREAAVVVEG  815 (845)
Q Consensus       763 ~~~------~----~~~~~~~~~~~~~~~~g~~~l~va~-----------------~~~~lG~~~~~D~lr~~~~~~I~~  815 (845)
                      +..      .    +.+..+++..++++++|+|++++||                 |+.|+|+++|+||||+|++++|+.
T Consensus       479 ~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~  558 (917)
T COG0474         479 ERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEE  558 (917)
T ss_pred             HHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHH
Confidence            311      1    1224466677889999999999987                 468999999999999999999999


Q ss_pred             HHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          816 LLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       816 L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      |+++||++|||||||++||++||++|||.
T Consensus       559 l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~  587 (917)
T COG0474         559 LREAGIKVWMITGDHVETAIAIAKECGIE  587 (917)
T ss_pred             HHHCCCcEEEECCCCHHHHHHHHHHcCCC
Confidence            99999999999999999999999999985

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=100.00  E-value=3.3e-59  Score=564.94  Aligned_cols=423  Identities=20%  Similarity=0.257  Sum_probs=326.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCccEEE
Q 003131          400 TSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIV  479 (845)
Q Consensus       400 ~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~l  479 (845)
                      .+++++++++++..+..++++|+++++++|.++.+.+++|+   |||   ++++|++++|||||||.|++||+|||||+|
T Consensus        83 ~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~Vi---Rdg---~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rL  156 (1053)
T TIGR01523        83 EGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVI---RNG---KSDAIDSHDLVPGDICLLKTGDTIPADLRL  156 (1053)
T ss_pred             HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEE---eCC---eeeecCHhhCCCCCEEEECCCCEeeccEEE
Confidence            46677788888999999999999999999999999999999   888   779999999999999999999999999999


Q ss_pred             Eecce-eeeccccCCcceeeeccCC---------------CceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhc-
Q 003131          480 VWGTS-YVNESMVTGEAVPVLKEIN---------------SPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQM-  542 (845)
Q Consensus       480 l~G~~-~Vdes~LTGEs~pv~k~~~---------------~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~-  542 (845)
                      ++++. .||||+|||||.|+.|.+.               +.+|+||.+.+|.++++|++||.+|.+|+|.+++.+... 
T Consensus       157 i~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~  236 (1053)
T TIGR01523       157 IETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGL  236 (1053)
T ss_pred             EEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhc
Confidence            99865 5999999999999999642               468999999999999999999999999999999865431 


Q ss_pred             ----------------------------------cCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCC
Q 003131          543 ----------------------------------SKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLP  588 (845)
Q Consensus       543 ----------------------------------~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~  588 (845)
                                                        .+||+|+.+++++.++..+.+++++++|+...+.            
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~------------  304 (1053)
T TIGR01523       237 FQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFD------------  304 (1053)
T ss_pred             cccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------------
Confidence                                              2489999999999988888777777666542210            


Q ss_pred             CCCchHHHHHHHHhhhheeecccccchhhHHHHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEE
Q 003131          589 ENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTA  668 (845)
Q Consensus       589 ~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~  668 (845)
                          .+...+.++++++++++|++||+.+.++++.+..+|+++++++|+++++|+||++++||+|||||||+|+|.|.++
T Consensus       305 ----~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i  380 (1053)
T TIGR01523       305 ----VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQI  380 (1053)
T ss_pred             ----hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEE
Confidence                1234567789999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             Eecc-----------CC-----------------------------------------C-------hhhHHHHHhhhh--
Q 003131          669 KVFT-----------KM-----------------------------------------D-------RGEFLTLVASAE--  687 (845)
Q Consensus       669 ~~~~-----------~~-----------------------------------------~-------~~~~~~~~~~~~--  687 (845)
                      +..+           ++                                         .       ..+++..++.+.  
T Consensus       381 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a  460 (1053)
T TIGR01523       381 WIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIA  460 (1053)
T ss_pred             EEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCC
Confidence            6421           00                                         0       011333333221  


Q ss_pred             -----------ccCCChhHHHHHHHHhhcCcCCC-----CCC---CCCC---CCCc--cccCCCccccccccccccCCCc
Q 003131          688 -----------ASSEHPLAKAVVEYARHFHFFDD-----PSL---NPDG---QSHS--KESTGSGWLLDVSDFSALPGRG  743 (845)
Q Consensus       688 -----------~~s~~p~~~al~~~~~~~~~~~~-----~~~---~~~~---~~~~--~~~~~~~~~~~~~~~~~~~g~g  743 (845)
                                 ...++|++.|++.++...+....     ...   ....   ....  +............+|++..++.
T Consensus       461 ~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~m  540 (1053)
T TIGR01523       461 TVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRM  540 (1053)
T ss_pred             eeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeE
Confidence                       11369999999999876653110     000   0000   0000  0000012223445666655543


Q ss_pred             eEEEEc--Ce---EEEEeehhhhhhcCC-----------CCC----hhhHHHHHHHHHccCeEEEEEE------------
Q 003131          744 IQCFIS--GK---QVLVGNRKLLNESGI-----------TIP----DHVESFVVELEESARTGILVAY------------  791 (845)
Q Consensus       744 i~~~~~--g~---~~~~g~~~~~~~~~~-----------~~~----~~~~~~~~~~~~~g~~~l~va~------------  791 (845)
                      .....+  |.   .+..|+++.+...+.           ++.    +.+.+..++++.+|+|++++||            
T Consensus       541 svv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~  620 (1053)
T TIGR01523       541 ASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQ  620 (1053)
T ss_pred             EEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchh
Confidence            333221  21   234576665433221           121    2244566789999999999986            


Q ss_pred             -------------CCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          792 -------------DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       792 -------------~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                                   |++|+|+++|+||+|++++++|+.||++||+++|+||||+.||.+||+++||.
T Consensus       621 ~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~  686 (1053)
T TIGR01523       621 LKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGII  686 (1053)
T ss_pred             hhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Confidence                         34799999999999999999999999999999999999999999999999995

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=100.00  E-value=2.3e-59  Score=572.50  Aligned_cols=428  Identities=21%  Similarity=0.257  Sum_probs=333.7

Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEc--CCCcc
Q 003131          396 TYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVL--PGTKL  473 (845)
Q Consensus       396 ~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~--~G~~v  473 (845)
                      .||..+++++++++++.++..++++|+.+.++++.. .+..++|+   |||   ++++|++++|+|||+|.|+  +|++|
T Consensus       191 ~~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~-~~~~v~V~---Rdg---~~~~I~s~eLvpGDiv~l~~~~g~~i  263 (1054)
T TIGR01657       191 EYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVH-KPQSVIVI---RNG---KWVTIASDELVPGDIVSIPRPEEKTM  263 (1054)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeeEEEE---ECC---EEEEEEcccCCCCCEEEEecCCCCEe
Confidence            466667777888888999999999999999999765 46788888   888   7799999999999999999  99999


Q ss_pred             CccEEEEecceeeeccccCCcceeeeccCC------------------Cceeccceeec-------ceEEEEEEEecCcc
Q 003131          474 PADGIVVWGTSYVNESMVTGEAVPVLKEIN------------------SPVIGGTINLH-------GVLHIQATKVGSDA  528 (845)
Q Consensus       474 PaDg~ll~G~~~Vdes~LTGEs~pv~k~~~------------------~~v~aGt~~~~-------g~~~~~v~~~g~~t  528 (845)
                      ||||+|++|++.||||+|||||.|+.|.+.                  +.+|+||.+..       |.+.++|++||.+|
T Consensus       264 PaD~~ll~g~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T  343 (1054)
T TIGR01657       264 PCDSVLLSGSCIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFST  343 (1054)
T ss_pred             cceEEEEeCcEEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccc
Confidence            999999999999999999999999999762                  24999999984       88999999999999


Q ss_pred             HHHHHHHHHHhhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheee
Q 003131          529 VLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIA  608 (845)
Q Consensus       529 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~  608 (845)
                      ..|++.+.+...+..++++++.+.++..++.    +++++.++++++.+...          ..++...+.+++++++++
T Consensus       344 ~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~----~~a~i~~i~~~~~~~~~----------~~~~~~~~l~~l~iiv~~  409 (1054)
T TIGR01657       344 SKGQLVRSILYPKPRVFKFYKDSFKFILFLA----VLALIGFIYTIIELIKD----------GRPLGKIILRSLDIITIV  409 (1054)
T ss_pred             cchHHHHHhhCCCCCCCchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHc----------CCcHHHHHHHHHHHHHhh
Confidence            9999999998887778888877666654443    33333333332222111          235778899999999999


Q ss_pred             cccccchhhHHHHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCC-------------
Q 003131          609 CPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMD-------------  675 (845)
Q Consensus       609 ~P~~L~la~p~~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------------  675 (845)
                      +|++||++++++++.++.+++|+||+||++.++|.+|++|++|||||||||+|+|.|.+++..++..             
T Consensus       410 vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~  489 (1054)
T TIGR01657       410 VPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLK  489 (1054)
T ss_pred             cCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccC
Confidence            9999999999999999999999999999999999999999999999999999999999998653210             


Q ss_pred             hhhHHHHHhhhh-------ccCCChhHHHHHHHHhhcCcCCCCCCCCCCCC---CccccCCCccccccccccccCCCceE
Q 003131          676 RGEFLTLVASAE-------ASSEHPLAKAVVEYARHFHFFDDPSLNPDGQS---HSKESTGSGWLLDVSDFSALPGRGIQ  745 (845)
Q Consensus       676 ~~~~~~~~~~~~-------~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~gi~  745 (845)
                      ...+....+.+.       ...++|++.|+++++.+....+..........   ..........+....+|++..++.-.
T Consensus       490 ~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsv  569 (1054)
T TIGR01657       490 PSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSV  569 (1054)
T ss_pred             chHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEE
Confidence            112233333322       23589999999998754321100000000000   00000012223445577776655332


Q ss_pred             E-EEc--Ce--EEEEeehhhhhhcCC--CCChhhHHHHHHHHHccCeEEEEEE---------------------CCeEEE
Q 003131          746 C-FIS--GK--QVLVGNRKLLNESGI--TIPDHVESFVVELEESARTGILVAY---------------------DDNLIG  797 (845)
Q Consensus       746 ~-~~~--g~--~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~l~va~---------------------~~~~lG  797 (845)
                      . ...  +.  .+..|+++.+.+...  ..|+++.+..++++.+|+|++++||                     |++|+|
T Consensus       570 vv~~~~~~~~~~~~KGApE~Il~~c~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flG  649 (1054)
T TIGR01657       570 IVSTNDERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLG  649 (1054)
T ss_pred             EEEEcCCCeEEEEEECCHHHHHHHcCCcCCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEE
Confidence            2 222  22  567799998877544  5688888899999999999999997                     357999


Q ss_pred             EEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          798 VMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       798 ~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +++|+||+||+++++|+.||++||+++|+||||+.||.+||+++||.
T Consensus       650 li~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii  696 (1054)
T TIGR01657       650 FIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIV  696 (1054)
T ss_pred             EEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999999999999999995

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=100.00  E-value=3.6e-59  Score=566.97  Aligned_cols=416  Identities=21%  Similarity=0.253  Sum_probs=335.3

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCcc
Q 003131          397 YFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPAD  476 (845)
Q Consensus       397 ~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaD  476 (845)
                      +|..+++++++++++.++..+++.|+.+.+++|.++.|.+++|+   |||   ++++|++++|+|||+|.|++||+||||
T Consensus       103 ~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~Vi---Rdg---~~~~I~~~~lv~GDiv~l~~Gd~IPaD  176 (997)
T TIGR01106       103 NLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVI---RDG---EKMSINAEQVVVGDLVEVKGGDRIPAD  176 (997)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEE---ECC---EEEEeeHHHCCCCCEEEECCCCEEeee
Confidence            34445667777788999999999999999999999999999999   888   779999999999999999999999999


Q ss_pred             EEEEecc-eeeeccccCCcceeeeccCCC----------ceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCC
Q 003131          477 GIVVWGT-SYVNESMVTGEAVPVLKEINS----------PVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKA  545 (845)
Q Consensus       477 g~ll~G~-~~Vdes~LTGEs~pv~k~~~~----------~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~  545 (845)
                      |+|++|+ +.||||+|||||.|+.|.+++          .+|+||.+.+|.+.++|++||.+|.+|++.+++++.+.+++
T Consensus       177 ~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~  256 (997)
T TIGR01106       177 LRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKT  256 (997)
T ss_pred             EEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCCC
Confidence            9999997 479999999999999998764          69999999999999999999999999999999998888899


Q ss_pred             hhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHH
Q 003131          546 PIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVAT  625 (845)
Q Consensus       546 ~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~  625 (845)
                      |+++.++++++++.+++++++++.+++|++.+              ..|..++.+++++++++|||+|+++++++++.+.
T Consensus       257 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~  322 (997)
T TIGR01106       257 PIAIEIEHFIHIITGVAVFLGVSFFILSLILG--------------YTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTA  322 (997)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------CCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHH
Confidence            99999999999999999888888777765432              2466788899999999999999999999999999


Q ss_pred             HHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccC--------------CC-----hhhHHHHHhhh
Q 003131          626 GVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTK--------------MD-----RGEFLTLVASA  686 (845)
Q Consensus       626 ~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~--------------~~-----~~~~~~~~~~~  686 (845)
                      .+|+++|+++|+++++|.||++|++|||||||||+|+|+|.+++..+.              .+     .+.++.+++.+
T Consensus       323 ~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alc  402 (997)
T TIGR01106       323 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLC  402 (997)
T ss_pred             HHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHc
Confidence            999999999999999999999999999999999999999999874321              00     01344444443


Q ss_pred             hc----------------cCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEEc-
Q 003131          687 EA----------------SSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFIS-  749 (845)
Q Consensus       687 ~~----------------~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~-  749 (845)
                      +.                ..++|++.|+++++........      ..   ..   ........+|++..++....... 
T Consensus       403 n~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~------~~---~~---~~~~v~~~pF~s~rK~m~~v~~~~  470 (997)
T TIGR01106       403 NRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVM------EM---RE---RNPKVVEIPFNSTNKYQLSIHENE  470 (997)
T ss_pred             CCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHH------HH---Hh---hCceeEEeccCCCCceEEEEEecc
Confidence            21                1357999999999875421000      00   00   01112234555544433322211 


Q ss_pred             ---C-e--EEEEeehhhhhh-------cCCC--CCh----hhHHHHHHHHHccCeEEEEEE-------------------
Q 003131          750 ---G-K--QVLVGNRKLLNE-------SGIT--IPD----HVESFVVELEESARTGILVAY-------------------  791 (845)
Q Consensus       750 ---g-~--~~~~g~~~~~~~-------~~~~--~~~----~~~~~~~~~~~~g~~~l~va~-------------------  791 (845)
                         + .  .+..|+++.+..       +|..  +++    .+++...+++.+|+|++++||                   
T Consensus       471 ~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~  550 (997)
T TIGR01106       471 DPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDV  550 (997)
T ss_pred             CCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhh
Confidence               1 1  244566654433       2222  222    244556778999999999986                   


Q ss_pred             -----CCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          792 -----DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       792 -----~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                           |++|+|+++++||+|+|++++|++|+++||+++|+|||++.||.++|+++||.
T Consensus       551 ~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~  608 (997)
T TIGR01106       551 NFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGII  608 (997)
T ss_pred             hccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence                 34699999999999999999999999999999999999999999999999995

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=100.00  E-value=1.4e-58  Score=558.44  Aligned_cols=437  Identities=21%  Similarity=0.266  Sum_probs=335.2

Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCc
Q 003131          396 TYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPA  475 (845)
Q Consensus       396 ~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPa  475 (845)
                      .|++ ++++++++++...+..++++|+++.+++|.++.|.+++|+   |||   ++++|++++|+|||+|.|++||+|||
T Consensus        35 ~~~~-~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~Vi---Rdg---~~~~I~~~~Lv~GDiv~l~~Gd~IPa  107 (917)
T TIGR01116        35 AFVE-PFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVL---RDG---RWSVIKAKDLVPGDIVELAVGDKVPA  107 (917)
T ss_pred             cHhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEE---ECC---EEEEEEHHHCCCCCEEEECCCCEeec
Confidence            4554 5666677778888899999999999999999999999999   888   77999999999999999999999999


Q ss_pred             cEEEEecc-eeeeccccCCcceeeeccCC-------------CceeccceeecceEEEEEEEecCccHHHHHHHHHHhhh
Q 003131          476 DGIVVWGT-SYVNESMVTGEAVPVLKEIN-------------SPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQ  541 (845)
Q Consensus       476 Dg~ll~G~-~~Vdes~LTGEs~pv~k~~~-------------~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~  541 (845)
                      ||+|++|+ +.||||+|||||.|+.|.++             +.+|+||.+.+|.+.++|++||.+|.+|+|.+.++.++
T Consensus       108 D~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~G~~~~~V~~tG~~T~~gki~~~~~~~~  187 (917)
T TIGR01116       108 DIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAE  187 (917)
T ss_pred             cEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEecceEEEEEEEeCCCCHHHHHHHHhhccC
Confidence            99999996 67999999999999999875             78999999999999999999999999999999999998


Q ss_pred             ccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHH
Q 003131          542 MSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAV  621 (845)
Q Consensus       542 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~  621 (845)
                      .+++|+|+.+++++.++.++.+++++++|+++........+...|.    ..+...+..++++++++|||+|++++++++
T Consensus       188 ~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l  263 (917)
T TIGR01116       188 QEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWI----QGAIYYFKIAVALAVAAIPEGLPAVITTCL  263 (917)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhH----HHHHHHHHHHHhhhhhccccccHHHHHHHH
Confidence            8999999999999999998888888777765533211000011111    234556778889999999999999999999


Q ss_pred             HHHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCC--------------C------------
Q 003131          622 MVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKM--------------D------------  675 (845)
Q Consensus       622 ~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~--------------~------------  675 (845)
                      +.+.++|+++|+++|+++++|+||++|++|||||||||+|+|+|.+++..++.              +            
T Consensus       264 ~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (917)
T TIGR01116       264 ALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPV  343 (917)
T ss_pred             HHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcc
Confidence            99999999999999999999999999999999999999999999998764310              0            


Q ss_pred             -------hhhHHHHHhhhhc-------------cCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCcc----ccCCCcccc
Q 003131          676 -------RGEFLTLVASAEA-------------SSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSK----ESTGSGWLL  731 (845)
Q Consensus       676 -------~~~~~~~~~~~~~-------------~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  731 (845)
                             ..+++..++.+..             ..++|++.|+++++.+.+................    .........
T Consensus       344 ~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  423 (917)
T TIGR01116       344 AGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKL  423 (917)
T ss_pred             cccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhccee
Confidence                   0122332222221             1369999999999887653211110000000000    000011123


Q ss_pred             ccccccccCCCceEEEEc--Ce--EEEEeehhhhhhc--------CC--CCCh----hhHHHHHHHHH-ccCeEEEEEE-
Q 003131          732 DVSDFSALPGRGIQCFIS--GK--QVLVGNRKLLNES--------GI--TIPD----HVESFVVELEE-SARTGILVAY-  791 (845)
Q Consensus       732 ~~~~~~~~~g~gi~~~~~--g~--~~~~g~~~~~~~~--------~~--~~~~----~~~~~~~~~~~-~g~~~l~va~-  791 (845)
                      ...+|++..++. ...++  +.  .+..|+++.+...        +.  ++.+    .+.+..++++. +|+|++++|| 
T Consensus       424 ~~~pF~s~rK~m-sviv~~~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k  502 (917)
T TIGR01116       424 ATLEFSRDRKSM-SVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFK  502 (917)
T ss_pred             eecccChhhCeE-EEEEeeCCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEE
Confidence            344565544332 22222  21  3444666654432        22  1222    24455678889 9999999986 


Q ss_pred             ----------------------CCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          792 ----------------------DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       792 ----------------------~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                                            |++|+|+++|+||+|++++++|+.||++||+++|+|||+++||.++|+++||.
T Consensus       503 ~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~  577 (917)
T TIGR01116       503 DIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIF  577 (917)
T ss_pred             ECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCC
Confidence                                  23789999999999999999999999999999999999999999999999995

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=9.5e-54  Score=474.01  Aligned_cols=441  Identities=22%  Similarity=0.311  Sum_probs=329.0

Q ss_pred             HHHHHHHHHhhhhcCCCCcchhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeec
Q 003131          377 YFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDA  456 (845)
Q Consensus       377 ~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~  456 (845)
                      |++.++++++     |....|+++++.++++.+.+.++..+..++.+..+++|.+.. ..++|+   |||   .+++|++
T Consensus       198 YlFQ~fSv~l-----W~~d~Y~~YA~cI~iisv~Si~~sv~e~r~qs~rlr~mv~~~-~~V~V~---R~g---~~~ti~S  265 (1140)
T KOG0208|consen  198 YLFQAFSVAL-----WLADSYYYYAFCIVIISVYSIVLSVYETRKQSIRLRSMVKFT-CPVTVI---RDG---FWETVDS  265 (1140)
T ss_pred             HHHHhHHhhh-----hhcccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-ceEEEE---ECC---EEEEEec
Confidence            4555555555     345677778888888888999999999999999999887643 567777   788   7899999


Q ss_pred             CCcCCCCEEEEcC-CCccCccEEEEecceeeeccccCCcceeeeccCC-------------------Cceeccceee---
Q 003131          457 LLIQSGDTLKVLP-GTKLPADGIVVWGTSYVNESMVTGEAVPVLKEIN-------------------SPVIGGTINL---  513 (845)
Q Consensus       457 ~~l~~GDii~v~~-G~~vPaDg~ll~G~~~Vdes~LTGEs~pv~k~~~-------------------~~v~aGt~~~---  513 (845)
                      +||+||||+.+.+ |-..|||++|++|+|.||||||||||+|+.|.+-                   +.+|+||.+.   
T Consensus       266 ~eLVPGDil~i~~~~~~~PcDa~Li~g~civNEsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r  345 (1140)
T KOG0208|consen  266 SELVPGDILYIPPPGKIMPCDALLISGDCIVNESMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQAR  345 (1140)
T ss_pred             cccccccEEEECCCCeEeecceEEEeCcEEeecccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEee
Confidence            9999999999999 9999999999999999999999999999999763                   3489999876   


Q ss_pred             ---cceEEEEEEEecCccHHHHHHHHHHhhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCC
Q 003131          514 ---HGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPEN  590 (845)
Q Consensus       514 ---~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~  590 (845)
                         ++.+.+.|++||.+|..|++++.+..++    |.....-+-+-.|+....++|++.|++..+....          .
T Consensus       346 ~~~g~~v~a~V~RTGF~T~KGqLVRsilyPk----P~~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~----------~  411 (1140)
T KOG0208|consen  346 AYLGGPVLAMVLRTGFSTTKGQLVRSILYPK----PVNFKFYRDSFKFILFLVIIALIGFIYTAIVLNL----------L  411 (1140)
T ss_pred             cCCCCceEEEEEeccccccccHHHHhhcCCC----CcccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHH----------c
Confidence               4789999999999999999998886654    2333333334445555555566555543332211          1


Q ss_pred             CchHHHHHHHHhhhheeecccccchhhHHHHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEe
Q 003131          591 GTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKV  670 (845)
Q Consensus       591 ~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~  670 (845)
                      +.++...+++++.++.+..|+|||.+++++...+++|+.|+||+|.+|+.+...|++|++|||||||||++.+.+..+.+
T Consensus       412 g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~  491 (1140)
T KOG0208|consen  412 GVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVP  491 (1140)
T ss_pred             CCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEe
Confidence            34677789999999999999999999999999999999999999999999999999999999999999999999999887


Q ss_pred             ccCC-Ch---------------------------hhHHHHHhhhhcc---------CCChhHHHHHHHHhhcCcCC---C
Q 003131          671 FTKM-DR---------------------------GEFLTLVASAEAS---------SEHPLAKAVVEYARHFHFFD---D  710 (845)
Q Consensus       671 ~~~~-~~---------------------------~~~~~~~~~~~~~---------s~~p~~~al~~~~~~~~~~~---~  710 (845)
                      ..+. +.                           ..+..  +.+.++         .++|++..+++...+...-.   +
T Consensus       492 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~  569 (1140)
T KOG0208|consen  492 VERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVA--AMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIED  569 (1140)
T ss_pred             ccccccccchhhhhhhhhccceeeccccccCCchHHHHH--HHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccc
Confidence            4321 00                           01111  111222         25677666666544331100   0


Q ss_pred             CCCCCCCC-------------CCccccCC-CccccccccccccCCC-ceEEEEcCe----EEEEeehhhhhhcCC--CCC
Q 003131          711 PSLNPDGQ-------------SHSKESTG-SGWLLDVSDFSALPGR-GIQCFISGK----QVLVGNRKLLNESGI--TIP  769 (845)
Q Consensus       711 ~~~~~~~~-------------~~~~~~~~-~~~~~~~~~~~~~~g~-gi~~~~~g~----~~~~g~~~~~~~~~~--~~~  769 (845)
                      ......+.             ....+... ...+....+|.+.-.| .+.+...|.    .+..|+++.+.+...  ++|
T Consensus       570 ~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tvP  649 (1140)
T KOG0208|consen  570 EATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETVP  649 (1140)
T ss_pred             hhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccCC
Confidence            00000000             00000000 1112223344443333 333333332    456699998887544  579


Q ss_pred             hhhHHHHHHHHHccCeEEEEEE---------------------CCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcC
Q 003131          770 DHVESFVVELEESARTGILVAY---------------------DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTG  828 (845)
Q Consensus       770 ~~~~~~~~~~~~~g~~~l~va~---------------------~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTG  828 (845)
                      .++++.+++|..+|+|++++|+                     |++|+|++.|+|+||++++.+|+.|++++||++|+||
T Consensus       650 ~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTG  729 (1140)
T KOG0208|consen  650 ADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTG  729 (1140)
T ss_pred             ccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcC
Confidence            9999999999999999999987                     6799999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHcCCCC
Q 003131          829 DNWRTAHAVAREVCVID  845 (845)
Q Consensus       829 D~~~tA~~iA~~~GI~~  845 (845)
                      ||..||..|||+|||.+
T Consensus       730 DNllTaisVakeCgmi~  746 (1140)
T KOG0208|consen  730 DNLLTAISVAKECGMIE  746 (1140)
T ss_pred             CchheeeehhhcccccC
Confidence            99999999999999963

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=100.00  E-value=1.6e-49  Score=487.64  Aligned_cols=434  Identities=17%  Similarity=0.209  Sum_probs=317.8

Q ss_pred             CcchhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCC-CceeeeEEeecCCcCCCCEEEEcCCCc
Q 003131          394 SPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKV-GKCIEEREIDALLIQSGDTLKVLPGTK  472 (845)
Q Consensus       394 ~~~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~-g~~~~~~~i~~~~l~~GDii~v~~G~~  472 (845)
                      ..+++...++++++..++.++|.+.++|+++.++      ++.++|+   |+ |   +++++++++|+|||+|.|++||+
T Consensus        50 ~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~~~n------~~~~~v~---~~~~---~~~~i~~~~l~~GDiv~l~~g~~  117 (1057)
T TIGR01652        50 RGTSIVPLAFVLIVTAIKEAIEDIRRRRRDKEVN------NRLTEVL---EGHG---QFVEIPWKDLRVGDIVKVKKDER  117 (1057)
T ss_pred             ccHhHHhHHHHHHHHHHHHHHHHHHHHHhHHHHh------CcEEEEE---CCCC---cEEEeeeecccCCCEEEEcCCCc
Confidence            3455556666677778999999999998887654      3688888   65 6   56899999999999999999999


Q ss_pred             cCccEEEEe-----cceeeeccccCCcceeeeccCC--------------------------------------------
Q 003131          473 LPADGIVVW-----GTSYVNESMVTGEAVPVLKEIN--------------------------------------------  503 (845)
Q Consensus       473 vPaDg~ll~-----G~~~Vdes~LTGEs~pv~k~~~--------------------------------------------  503 (845)
                      ||||++|++     |.+.||||+|||||.|+.|.+.                                            
T Consensus       118 iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~  197 (1057)
T TIGR01652       118 IPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYP  197 (1057)
T ss_pred             ccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCccc
Confidence            999999998     7789999999999999988631                                            


Q ss_pred             ----Cceeccceeec-ceEEEEEEEecCccHHHHHHHHHHhhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Q 003131          504 ----SPVIGGTINLH-GVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGV  578 (845)
Q Consensus       504 ----~~v~aGt~~~~-g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~  578 (845)
                          +.+++||.+.+ |++.+.|++||.+|.+++.   ....+.+++++++.++++..+++.+.++++++++++..++..
T Consensus       198 l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n---~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~  274 (1057)
T TIGR01652       198 LSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRN---ATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWND  274 (1057)
T ss_pred             CCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhc---CCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheec
Confidence                34678888888 9999999999999988653   344566789999999999988887777777766665333211


Q ss_pred             cCCCCCCcCC-------CCCchHHHHHHHHhhhheeecccccchhhHHHHHHHH------HHHHhc----CeEEecchHH
Q 003131          579 LGAYPEQWLP-------ENGTHFVFALMFSISVVVIACPCALGLATPTAVMVAT------GVGANN----GVLIKGGDAL  641 (845)
Q Consensus       579 ~~~~~~~~~~-------~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~------~~~~~~----gilvk~~~~~  641 (845)
                      . .....|..       .....+...+..++.++...+|.+|+..+.++.....      .+|.++    ++++|+.+.+
T Consensus       275 ~-~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~  353 (1057)
T TIGR01652       275 A-HGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLN  353 (1057)
T ss_pred             c-cCCCccceecCcccccchhHHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCCh
Confidence            0 11112311       0012355577788899999999999999999988888      677663    5999999999


Q ss_pred             HhhcCCcEEEecCCCccccCCeEEEEEEeccC-----CC-----------------------------------------
Q 003131          642 ERAQKIKYVIFDKTGTLTQGRATVTTAKVFTK-----MD-----------------------------------------  675 (845)
Q Consensus       642 e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~-----~~-----------------------------------------  675 (845)
                      |.||++++||+|||||||+|+|.+++++..+.     ..                                         
T Consensus       354 E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  433 (1057)
T TIGR01652       354 EELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTN  433 (1057)
T ss_pred             HHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcC
Confidence            99999999999999999999999999864210     00                                         


Q ss_pred             ------hhhHHHHHhhhh--------c-------cCCChhHHHHHHHHhhcCcCCCCCCCCC-CCC-CccccCCCccccc
Q 003131          676 ------RGEFLTLVASAE--------A-------SSEHPLAKAVVEYARHFHFFDDPSLNPD-GQS-HSKESTGSGWLLD  732 (845)
Q Consensus       676 ------~~~~~~~~~~~~--------~-------~s~~p~~~al~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~  732 (845)
                            ..+++..++.+.        .       .+.+|.+.|++++++..++....+.... ... ..........+..
T Consensus       434 ~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~  513 (1057)
T TIGR01652       434 KPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILN  513 (1057)
T ss_pred             CchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEE
Confidence                  012222222211        1       1468999999999987764221111100 000 0000001233445


Q ss_pred             cccccccCCCceEEEEc---Ce--EEEEeehhhhhhcCC----CCChhhHHHHHHHHHccCeEEEEEE------------
Q 003131          733 VSDFSALPGRGIQCFIS---GK--QVLVGNRKLLNESGI----TIPDHVESFVVELEESARTGILVAY------------  791 (845)
Q Consensus       733 ~~~~~~~~g~gi~~~~~---g~--~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~l~va~------------  791 (845)
                      ..+|++..++. .+.++   |.  .+..|+++.+.....    ..++...+.+++++.+|+|++++|+            
T Consensus       514 ~~pF~s~rKrm-Sviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~  592 (1057)
T TIGR01652       514 VLEFNSDRKRM-SVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWN  592 (1057)
T ss_pred             ecccCCCCCeE-EEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHH
Confidence            56777766553 22222   22  345577665544221    1234456678899999999999986            


Q ss_pred             --------------------------CCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          792 --------------------------DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       792 --------------------------~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                                                |++|+|+++++|+||++++++|+.||++||++||+|||+++||++||++|||.
T Consensus       593 ~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii  671 (1057)
T TIGR01652       593 EEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLL  671 (1057)
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCC
Confidence                                      55899999999999999999999999999999999999999999999999986

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]

Probab=100.00  E-value=1.2e-47  Score=398.03  Aligned_cols=408  Identities=28%  Similarity=0.365  Sum_probs=323.3

Q ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHHHHccCCC-eEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEec
Q 003131          404 LITFVLFGKYLEILAKGKTSDAIKKLVELAPA-TALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWG  482 (845)
Q Consensus       404 i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~-~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G  482 (845)
                      +.+.+++..+-|..++.|...+-..|++.+.+ .++++.  .+|   ..+.+++.+|+.||+|.|+.||.||+||.|++|
T Consensus        72 L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~--~~g---~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG  146 (681)
T COG2216          72 LWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLR--ADG---SIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG  146 (681)
T ss_pred             HHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhc--CCC---CeeeccccccccCCEEEEecCCCccCCCeEEee
Confidence            33345788899999998888777777665554 455552  346   679999999999999999999999999999999


Q ss_pred             ceeeeccccCCcceeeeccCC---CceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCChhhHHHHHHhhhHH
Q 003131          483 TSYVNESMVTGEAVPVLKEIN---SPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFV  559 (845)
Q Consensus       483 ~~~Vdes~LTGEs~pv~k~~~---~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  559 (845)
                      .+.||||.+||||-||.|+.|   +.|-.||.+.+.+++++++....+|++.|++.+++.++.+|+|.+--+..+..-+.
T Consensus       147 ~asVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LT  226 (681)
T COG2216         147 VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLT  226 (681)
T ss_pred             eeecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHH
Confidence            999999999999999999998   67999999999999999999999999999999999999999998765444332222


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHHHHHHhcCeEEecch
Q 003131          560 PIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGD  639 (845)
Q Consensus       560 ~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~~~~~gilvk~~~  639 (845)
                      .+++ ++.  .-.|.+..+.+          ..  ...+...+++++..+|-.++--++.-=..++.|+.+.+++.+++.
T Consensus       227 liFL-~~~--~Tl~p~a~y~~----------g~--~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGR  291 (681)
T COG2216         227 LIFL-LAV--ATLYPFAIYSG----------GG--AASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGR  291 (681)
T ss_pred             HHHH-HHH--HhhhhHHHHcC----------CC--CcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcc
Confidence            1111 111  11122211110          00  012445677888888988887777666778999999999999999


Q ss_pred             HHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCChhhHHHHHhhhhccCCChhHHHHHHHHhhcCcCCCCCCCCCCCC
Q 003131          640 ALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQS  719 (845)
Q Consensus       640 ~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~  719 (845)
                      ++|.+|.+|+++.|||||+|-|+-.-.++++.++.+.+++...+.......+.|-.++|++.++..+....    .+...
T Consensus       292 AVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv~~~~la~aa~lsSl~DeTpEGrSIV~LA~~~~~~~~----~~~~~  367 (681)
T COG2216         292 AVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGVSEEELADAAQLASLADETPEGRSIVELAKKLGIELR----EDDLQ  367 (681)
T ss_pred             hhhhcCCccEEEecccCceeecchhhhheecCCCCCHHHHHHHHHHhhhccCCCCcccHHHHHHHhccCCC----ccccc
Confidence            99999999999999999999999999999999999999999888888888889999999999988752111    00000


Q ss_pred             CccccCCCccccccccccccCCC-ceEEEEcCeEEEEeehh----hhhhcCCCCChhhHHHHHHHHHccCeEEEEEECCe
Q 003131          720 HSKESTGSGWLLDVSDFSALPGR-GIQCFISGKQVLVGNRK----LLNESGITIPDHVESFVVELEESARTGILVAYDDN  794 (845)
Q Consensus       720 ~~~~~~~~~~~~~~~~~~~~~g~-gi~~~~~g~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~  794 (845)
                             .  -.+..+|+..... |+.. -+|.++..|+..    ++.+.+..+|.+++...++.+..|.+++.|..|++
T Consensus       368 -------~--~~~fvpFtA~TRmSGvd~-~~~~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~~  437 (681)
T COG2216         368 -------S--HAEFVPFTAQTRMSGVDL-PGGREIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENGR  437 (681)
T ss_pred             -------c--cceeeecceecccccccC-CCCceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEECCE
Confidence                   0  0233344433221 2211 123567777644    55667778899999999999999999999999999


Q ss_pred             EEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 003131          795 LIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVID  845 (845)
Q Consensus       795 ~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~~  845 (845)
                      ++|.+.++|-+||+.+|-+.+||++|||++|+||||+.||.+||+|.|+++
T Consensus       438 ~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd  488 (681)
T COG2216         438 ILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD  488 (681)
T ss_pred             EEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh
Confidence            999999999999999999999999999999999999999999999999874

>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=6.1e-49  Score=416.43  Aligned_cols=415  Identities=20%  Similarity=0.294  Sum_probs=332.5

Q ss_pred             CCCcchhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCC
Q 003131          392 FWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGT  471 (845)
Q Consensus       392 ~~~~~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~  471 (845)
                      +.+++|-+ ...+..+++++..+....+..+-+....|..-...++.|+   |||   ++.++++.+||||||+.++.|+
T Consensus        92 ~~~~DW~D-F~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVl---RDG---kw~E~eAs~lVPGDIlsik~Gd  164 (942)
T KOG0205|consen   92 GRPPDWQD-FVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVL---RDG---KWSEQEASILVPGDILSIKLGD  164 (942)
T ss_pred             CCCcchhh-hhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEe---ecC---eeeeeeccccccCceeeeccCC
Confidence            44556665 3455566667777777777778888888877777788888   899   7799999999999999999999


Q ss_pred             ccCccEEEEeccee-eeccccCCcceeeeccCCCceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCChhhHH
Q 003131          472 KLPADGIVVWGTSY-VNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKF  550 (845)
Q Consensus       472 ~vPaDg~ll~G~~~-Vdes~LTGEs~pv~k~~~~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~  550 (845)
                      +||||++|++|+-+ ||+|.|||||.|+.|++|+.+|+||.+..|++.++|++||.+|++|+-..++.. .....-+|+.
T Consensus       165 IiPaDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkV  243 (942)
T KOG0205|consen  165 IIPADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKV  243 (942)
T ss_pred             EecCccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHH
Confidence            99999999999976 999999999999999999999999999999999999999999999999999977 5566788888


Q ss_pred             HHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheee-cccccchhhHHHHHHHHHHHH
Q 003131          551 ADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIA-CPCALGLATPTAVMVATGVGA  629 (845)
Q Consensus       551 ~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~-~P~~L~la~p~~~~~~~~~~~  629 (845)
                      +..+..+++..+.+-.++.+++.+...              .-.+.-....+.++++. +|.++|..+++.++++..+++
T Consensus       244 Lt~IGn~ci~si~~g~lie~~vmy~~q--------------~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLa  309 (942)
T KOG0205|consen  244 LTGIGNFCICSIALGMLIEITVMYPIQ--------------HRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLS  309 (942)
T ss_pred             HHhhhhHHHHHHHHHHHHHHHhhhhhh--------------hhhhhhhhhheheeeecccccccceeeeehhhHHHHHHH
Confidence            888888766554443333333222211              11223344556666666 999999999999999999999


Q ss_pred             hcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEE--E-EeccCCChhhHHHHHhhhh-ccCCChhHHHHHHHHhhc
Q 003131          630 NNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTT--A-KVFTKMDRGEFLTLVASAE-ASSEHPLAKAVVEYARHF  705 (845)
Q Consensus       630 ~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~--~-~~~~~~~~~~~~~~~~~~~-~~s~~p~~~al~~~~~~~  705 (845)
                      ++|.++|+..++|.++.+|++|+|||||||.|+++|.+  + +...+.+.++++-.++.+. ....+.++.|++......
T Consensus       310 qqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dP  389 (942)
T KOG0205|consen  310 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADP  389 (942)
T ss_pred             hcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCH
Confidence            99999999999999999999999999999999999998  5 4456778888776666554 345678999998765432


Q ss_pred             CcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEEc--Ce--EEEEeehhhhhh---cCCCCChhhHHHHHH
Q 003131          706 HFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFIS--GK--QVLVGNRKLLNE---SGITIPDHVESFVVE  778 (845)
Q Consensus       706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~--g~--~~~~g~~~~~~~---~~~~~~~~~~~~~~~  778 (845)
                                      ++....+...++.+|....++--..+++  |.  +...|.+.++-+   ..-++|+...+.+.+
T Consensus       390 ----------------Keara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~  453 (942)
T KOG0205|consen  390 ----------------KEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDK  453 (942)
T ss_pred             ----------------HHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHH
Confidence                            1111122334555666666554444443  43  566788887644   334678888888999


Q ss_pred             HHHccCeEEEEEEC-------------CeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          779 LEESARTGILVAYD-------------DNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       779 ~~~~g~~~l~va~~-------------~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      ++++|+|.++||+.             .+++|++-+-||+|.++.++|.+-...|++|.|+|||....++..++++|+-
T Consensus       454 ~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmg  532 (942)
T KOG0205|consen  454 FAERGLRSLAVARQEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG  532 (942)
T ss_pred             HHHhcchhhhhhhhccccccccCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccc
Confidence            99999999999973             2799999999999999999999999999999999999999999999999873

>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]

Probab=100.00  E-value=2.3e-49  Score=432.68  Aligned_cols=426  Identities=20%  Similarity=0.255  Sum_probs=319.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCccE
Q 003131          398 FETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADG  477 (845)
Q Consensus       398 ~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg  477 (845)
                      ...+++++.++.+...+.++++.|..+.++.+.++.|..++|+   |||   +...+..++|++||++.++-|++||||.
T Consensus       126 ly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~Vi---Rdg---~k~~i~~eelVvGD~v~vk~GdrVPADi  199 (1019)
T KOG0203|consen  126 LYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVI---RDG---EKMTINAEELVVGDLVEVKGGDRVPADI  199 (1019)
T ss_pred             eEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheee---ecc---eeEEechhhcccccceeeccCCccccee
Confidence            3335555555666677888899999999999999999999999   898   7799999999999999999999999999


Q ss_pred             EEEeccee-eeccccCCcceeeeccCC----------CceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCCh
Q 003131          478 IVVWGTSY-VNESMVTGEAVPVLKEIN----------SPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAP  546 (845)
Q Consensus       478 ~ll~G~~~-Vdes~LTGEs~pv~k~~~----------~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~  546 (845)
                      +++++... +|+|+|||||.|..+.+.          +.-|.+|.+++|.+++.|.+||.+|.+|+|..+-..-...++|
T Consensus       200 Riis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~~t~  279 (1019)
T KOG0203|consen  200 RIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDGKTP  279 (1019)
T ss_pred             EEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCCCCc
Confidence            99999876 999999999999988652          4578899999999999999999999999999999888889999


Q ss_pred             hhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHHH
Q 003131          547 IQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATG  626 (845)
Q Consensus       547 ~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~  626 (845)
                      +++..+++..+.....+++++..|+.....+              ..|..++.+.+.++++..|.+|+..++..+....+
T Consensus       280 ~~~ei~~fi~~it~vAi~~~i~fF~~~~~~g--------------y~~l~avv~~i~iivAnvPeGL~~tvTv~Ltltak  345 (1019)
T KOG0203|consen  280 IAKEIEHFIHIITGVAIFLGISFFILALILG--------------YEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAK  345 (1019)
T ss_pred             chhhhhchHHHHHHHHHHHHHHHHHHHHhhc--------------chhHHHhhhhheeEEecCcCCccceehhhHHHHHH
Confidence            9999999988887777777776665544432              25778888899999999999999999999999999


Q ss_pred             HHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCC-------------------hhhHHHHHhhhh
Q 003131          627 VGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMD-------------------RGEFLTLVASAE  687 (845)
Q Consensus       627 ~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------------------~~~~~~~~~~~~  687 (845)
                      +|+++++++|+.++.|.+|...+||.|||||||+|+|.|.+++..+.+.                   -.++.+++..+.
T Consensus       346 rMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn  425 (1019)
T KOG0203|consen  346 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCN  425 (1019)
T ss_pred             HHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999999988654321                   112333332221


Q ss_pred             cc----------------CCChhHHHHHHHHhhcCcC-CCCCCCCCCC-CCccccCCCccccccccccccCCCceEEEEc
Q 003131          688 AS----------------SEHPLAKAVVEYARHFHFF-DDPSLNPDGQ-SHSKESTGSGWLLDVSDFSALPGRGIQCFIS  749 (845)
Q Consensus       688 ~~----------------s~~p~~~al~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~  749 (845)
                      ..                .+++.+.||++++...... ...+...... +....+. +.....+...+.-........+|
T Consensus       426 ~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt-~Kyqlsih~~~d~~~~~~~l~mK  504 (1019)
T KOG0203|consen  426 RAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNST-NKYQLSIHETEDPSDPRFLLVMK  504 (1019)
T ss_pred             cceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccc-cceEEEEEecCCCCCccceeeec
Confidence            11                4678899999887543110 0000000000 0000000 00000111111101122333445


Q ss_pred             Ce-EEEEeehhhhhhcCCCCChh------hHHHHHHHHHccCeEEEEEE------------------------CCeEEEE
Q 003131          750 GK-QVLVGNRKLLNESGITIPDH------VESFVVELEESARTGILVAY------------------------DDNLIGV  798 (845)
Q Consensus       750 g~-~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~l~va~------------------------~~~~lG~  798 (845)
                      |+ +.++-++..+.-+|.+.|.+      +.+...++...|.|++++++                        ++.|+|+
T Consensus       505 Gape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl  584 (1019)
T KOG0203|consen  505 GAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGL  584 (1019)
T ss_pred             CChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccch
Confidence            54 22223333333334443322      33344455566777765543                        5689999


Q ss_pred             EEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          799 MGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       799 ~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +++.||+|..+++++.+||.+|||++|+|||++.||+++|+++||.
T Consensus       585 ~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi  630 (1019)
T KOG0203|consen  585 ISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGII  630 (1019)
T ss_pred             hhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeee
Confidence            9999999999999999999999999999999999999999999974

>PLN03190 aminophospholipid translocase; Provisional

Probab=100.00  E-value=1.2e-45  Score=447.91  Aligned_cols=436  Identities=16%  Similarity=0.154  Sum_probs=304.8

Q ss_pred             CcchhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCcc
Q 003131          394 SPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKL  473 (845)
Q Consensus       394 ~~~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~v  473 (845)
                      ...++...++++++..++..+|.+.++|+++.++      ++.++++   ++|   .++++++++|+|||+|.|++||+|
T Consensus       136 ~~t~~~PL~~vl~v~~ike~~Ed~~r~k~d~~~N------~~~~~v~---~~~---~~~~i~~~~i~vGDiv~v~~ge~i  203 (1178)
T PLN03190        136 RGASILPLAFVLLVTAVKDAYEDWRRHRSDRIEN------NRLAWVL---VDD---QFQEKKWKDIRVGEIIKIQANDTL  203 (1178)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhc------CcEEEEE---ECC---eEEEEeHHHCCCCCEEEECCCCEe
Confidence            3445556677777888999999999999998765      3678888   677   678899999999999999999999


Q ss_pred             CccEEEEe-----cceeeeccccCCcceeeeccCCC--------------------------------------------
Q 003131          474 PADGIVVW-----GTSYVNESMVTGEAVPVLKEINS--------------------------------------------  504 (845)
Q Consensus       474 PaDg~ll~-----G~~~Vdes~LTGEs~pv~k~~~~--------------------------------------------  504 (845)
                      ||||+|++     |.+.||+|+|||||.|+.|.+++                                            
T Consensus       204 PaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~  283 (1178)
T PLN03190        204 PCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPS  283 (1178)
T ss_pred             eeeEEEEeccCCCceEEEEccccCCeeeeeEecccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCcc
Confidence            99999998     88999999999999999996542                                            


Q ss_pred             -ceeccceeec-ceEEEEEEEecCccHHHHHHHHHHhhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 003131          505 -PVIGGTINLH-GVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAY  582 (845)
Q Consensus       505 -~v~aGt~~~~-g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~  582 (845)
                       .++.|+.+.+ .++.++|++||.+|...   .....+..+++++++.++++..+++.+.+++++++++...++......
T Consensus       284 n~llRG~~LrnT~~i~GvVVYTG~dTK~~---~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~  360 (1178)
T PLN03190        284 NIILRGCELKNTAWAIGVAVYCGRETKAM---LNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRD  360 (1178)
T ss_pred             ceeeccceecCCceEEEEEEEechhhhHh---hcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Confidence             1223333332 37999999999999742   222334467899999999999888877777777766553222110000


Q ss_pred             C---CCcCCC-----------CCc----hHHHHHHHHhhhheeecccccchhhHHHHHHHHHHHHhc----------CeE
Q 003131          583 P---EQWLPE-----------NGT----HFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANN----------GVL  634 (845)
Q Consensus       583 ~---~~~~~~-----------~~~----~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~~~~~----------gil  634 (845)
                      .   -.|...           ...    .+...+...+.++-..+|.+|...+.+........+.+.          ++.
T Consensus       361 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~  440 (1178)
T PLN03190        361 ELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQ  440 (1178)
T ss_pred             cccccccccccccccccccccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcce
Confidence            0   011100           000    112233344556568899999999999986645555432          378


Q ss_pred             EecchHHHhhcCCcEEEecCCCccccCCeEEEEEEecc------C------------------------C----------
Q 003131          635 IKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFT------K------------------------M----------  674 (845)
Q Consensus       635 vk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~------~------------------------~----------  674 (845)
                      +|+.+..|.||+|++||+|||||||+|+|.++++...+      .                        .          
T Consensus       441 vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  520 (1178)
T PLN03190        441 CRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELS  520 (1178)
T ss_pred             eccCcchhhhccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhh
Confidence            99999999999999999999999999999999986521      0                        0          


Q ss_pred             ----C-h-----hhHHHHHhhhh-------------------ccCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccC
Q 003131          675 ----D-R-----GEFLTLVASAE-------------------ASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKEST  725 (845)
Q Consensus       675 ----~-~-----~~~~~~~~~~~-------------------~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (845)
                          . .     .+++...+.+.                   ..+.+|.+.||+.+|...|+....+....-........
T Consensus       521 ~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~  600 (1178)
T PLN03190        521 KSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGER  600 (1178)
T ss_pred             hccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccce
Confidence                0 0     12333222211                   12348999999999998875322221111000001111


Q ss_pred             CCccccccccccccCCCceEEEE--cCe--EEEEeehhhhhhcCC-----CCChhhHHHHHHHHHccCeEEEEEE-----
Q 003131          726 GSGWLLDVSDFSALPGRGIQCFI--SGK--QVLVGNRKLLNESGI-----TIPDHVESFVVELEESARTGILVAY-----  791 (845)
Q Consensus       726 ~~~~~~~~~~~~~~~g~gi~~~~--~g~--~~~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~l~va~-----  791 (845)
                      ....+....+|++..++.-...-  +|.  -+..|+++.+.....     ..++...+.+++++.+|+|++++||     
T Consensus       601 ~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~  680 (1178)
T PLN03190        601 QRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELND  680 (1178)
T ss_pred             ecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCH
Confidence            13344556677776655322221  122  234566665443211     1234466778899999999999875     


Q ss_pred             ---------------------------------CCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 003131          792 ---------------------------------DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVA  838 (845)
Q Consensus       792 ---------------------------------~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA  838 (845)
                                                       |++++|+++++|++|++++++|+.|+++||++||+|||+++||++||
T Consensus       681 ~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA  760 (1178)
T PLN03190        681 SEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIG  760 (1178)
T ss_pred             HHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
Confidence                                             56899999999999999999999999999999999999999999999


Q ss_pred             HHcCCC
Q 003131          839 REVCVI  844 (845)
Q Consensus       839 ~~~GI~  844 (845)
                      ++|||.
T Consensus       761 ~s~~Ll  766 (1178)
T PLN03190        761 YSSKLL  766 (1178)
T ss_pred             HHhCCC
Confidence            999985

>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=1.1e-46  Score=408.68  Aligned_cols=424  Identities=20%  Similarity=0.214  Sum_probs=297.7

Q ss_pred             cchhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcC---CC
Q 003131          395 PTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLP---GT  471 (845)
Q Consensus       395 ~~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~---G~  471 (845)
                      ++||+++..-++++..-+.--.+++-|+...++++ ...|....|.   |++   +|+.+.++||.|||+|.|..   ..
T Consensus       214 DeyWYySlFtLfMli~fE~tlV~Qrm~~lse~R~M-g~kpy~I~v~---R~k---KW~~l~seeLlPgDvVSI~r~~ed~  286 (1160)
T KOG0209|consen  214 DEYWYYSLFTLFMLIAFEATLVKQRMRTLSEFRTM-GNKPYTINVY---RNK---KWVKLMSEELLPGDVVSIGRGAEDS  286 (1160)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEEE---ecC---cceeccccccCCCceEEeccCcccC
Confidence            45665554444444333334445555555556655 3355667777   777   67999999999999999987   56


Q ss_pred             ccCccEEEEecceeeeccccCCcceeeeccC-----------------CCceeccceee-------------cceEEEEE
Q 003131          472 KLPADGIVVWGTSYVNESMVTGEAVPVLKEI-----------------NSPVIGGTINL-------------HGVLHIQA  521 (845)
Q Consensus       472 ~vPaDg~ll~G~~~Vdes~LTGEs~pv~k~~-----------------~~~v~aGt~~~-------------~g~~~~~v  521 (845)
                      .||||.+|++|+|.|||+||||||.|..|.+                 ...+|+||.++             +|.+.+.|
T Consensus       287 ~vPCDllLL~GsciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~V  366 (1160)
T KOG0209|consen  287 HVPCDLLLLRGSCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYV  366 (1160)
T ss_pred             cCCceEEEEecceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEE
Confidence            7999999999999999999999999999965                 12489999875             58899999


Q ss_pred             EEecCccHHHHHHHHHHhhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHH
Q 003131          522 TKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFS  601 (845)
Q Consensus       522 ~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  601 (845)
                      ++||.+|.-|++.+.+.-..++-|.-.+    -+.+|+.+.+++|++..  |+.+....       .+...+-+.-+.-.
T Consensus       367 lrTGFeTSQGkLvRtilf~aervTaNn~----Etf~FILFLlVFAiaAa--~Yvwv~Gs-------kd~~RsrYKL~LeC  433 (1160)
T KOG0209|consen  367 LRTGFETSQGKLVRTILFSAERVTANNR----ETFIFILFLLVFAIAAA--GYVWVEGS-------KDPTRSRYKLFLEC  433 (1160)
T ss_pred             EeccccccCCceeeeEEecceeeeeccH----HHHHHHHHHHHHHHHhh--heEEEecc-------cCcchhhhheeeee
Confidence            9999999999988776554433332222    22233333333333322  22211000       01112334455566


Q ss_pred             hhhheeecccccchhhHHHHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCC-------
Q 003131          602 ISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKM-------  674 (845)
Q Consensus       602 i~vlv~~~P~~L~la~p~~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~-------  674 (845)
                      +.++...+|+-||+-+++|.-.++..++|.|++|..|-++.-+|++|++|||||||||+..|.|.++.-....       
T Consensus       434 ~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~  513 (1160)
T KOG0209|consen  434 TLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPA  513 (1160)
T ss_pred             eEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccch
Confidence            7778888999999999999999999999999999999999999999999999999999999999998653221       


Q ss_pred             ---Chhh--HHHHHhhh---h-ccCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCC-ce
Q 003131          675 ---DRGE--FLTLVASA---E-ASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGR-GI  744 (845)
Q Consensus       675 ---~~~~--~~~~~~~~---~-~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-gi  744 (845)
                         ..+.  ++..+.++   + .-.++|+++|.+++..|.....+....++...      ....+..-..|.+.-+| .+
T Consensus       514 s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~------~~lkI~~ryhFsSaLKRmsv  587 (1160)
T KOG0209|consen  514 SKAPNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNG------KKLKIIQRYHFSSALKRMSV  587 (1160)
T ss_pred             hhCCchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCcccccCcccCCCcCCC------cccchhhhhhHHHHHHHHHh
Confidence               1112  22222222   2 34689999999999877532221111111100      00111122223222111 11


Q ss_pred             EEEEcC-------eEEEEeehhhhhhcCCCCChhhHHHHHHHHHccCeEEEEEE---------------------CCeEE
Q 003131          745 QCFISG-------KQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAY---------------------DDNLI  796 (845)
Q Consensus       745 ~~~~~g-------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~---------------------~~~~l  796 (845)
                      .+..++       -....|+++.+...-.++|.++++...++..+|.|+++++|                     |+.|.
T Consensus       588 va~~~~~g~s~k~~~aVKGAPEvi~~ml~dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFa  667 (1160)
T KOG0209|consen  588 VASHQGPGSSEKYFVAVKGAPEVIQEMLRDVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFA  667 (1160)
T ss_pred             hhhcccCCCceEEEEEecCCHHHHHHHHHhCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceee
Confidence            111111       02334778877776667899999999999999999999988                     67999


Q ss_pred             EEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          797 GVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       797 G~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      |++.|.-|+|+|++++|+.|++.+.+++||||||+.||.+||+++||.
T Consensus       668 GFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv  715 (1160)
T KOG0209|consen  668 GFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIV  715 (1160)
T ss_pred             eeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeee
Confidence            999999999999999999999999999999999999999999999985

>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=1.5e-39  Score=346.87  Aligned_cols=421  Identities=18%  Similarity=0.232  Sum_probs=297.3

Q ss_pred             CCcchhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCc
Q 003131          393 WSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTK  472 (845)
Q Consensus       393 ~~~~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~  472 (845)
                      ....|+...++++++.++...++...+++.++..++      +...+..  |+|.    ...++++|++||+|.+..+++
T Consensus       127 ~l~ty~~pl~fvl~itl~keavdd~~r~~rd~~~Ns------e~y~~lt--r~~~----~~~~Ss~i~vGDvi~v~K~~R  194 (1051)
T KOG0210|consen  127 YLSTYWGPLGFVLTITLIKEAVDDLKRRRRDRELNS------EKYTKLT--RDGT----RREPSSDIKVGDVIIVHKDER  194 (1051)
T ss_pred             chhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------hhheeec--cCCc----ccccccccccccEEEEecCCc
Confidence            345677778888899999999999988877766654      2344443  5663    223999999999999999999


Q ss_pred             cCccEEEEe-----cceeeeccccCCcceeeeccC---------------------------------------------
Q 003131          473 LPADGIVVW-----GTSYVNESMVTGEAVPVLKEI---------------------------------------------  502 (845)
Q Consensus       473 vPaDg~ll~-----G~~~Vdes~LTGEs~pv~k~~---------------------------------------------  502 (845)
                      ||||.++++     |+|+|-+..|+||++...|-+                                             
T Consensus       195 VPADmilLrTsd~sg~~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~L  274 (1051)
T KOG0210|consen  195 VPADMILLRTSDKSGSCFIRTDQLDGETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESL  274 (1051)
T ss_pred             CCcceEEEEccCCCCceEEeccccCCcccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcc
Confidence            999999996     889999999999998876621                                             


Q ss_pred             --CCceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC
Q 003131          503 --NSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLG  580 (845)
Q Consensus       503 --~~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~  580 (845)
                        .+.++++|++.+|.+.+.|++||.+|+..-  + -..++.+-..++..++-+.+++...+++++++....   .++  
T Consensus       275 sventLWanTVvAs~t~~gvVvYTG~dtRsvM--N-ts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~---~g~--  346 (1051)
T KOG0210|consen  275 SVENTLWANTVVASGTAIGVVVYTGRDTRSVM--N-TSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAM---KGF--  346 (1051)
T ss_pred             cccceeeeeeeEecCcEEEEEEEecccHHHHh--c-cCCcccccceeeeecccHHHHHHHHHHHHHHHHHHh---hcC--
Confidence              346899999999999999999999996511  0 112223333456667778888888877777654332   111  


Q ss_pred             CCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHHHHHHh----cCeEEecchHHHhhcCCcEEEecCCC
Q 003131          581 AYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGAN----NGVLIKGGDALERAQKIKYVIFDKTG  656 (845)
Q Consensus       581 ~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~~~~----~gilvk~~~~~e~lg~v~~i~fDKTG  656 (845)
                                ...|+..+++++.++-..+|..|-.-+-++-..-.....+    .|.++|+.+..|.||++.++..||||
T Consensus       347 ----------~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTG  416 (1051)
T KOG0210|consen  347 ----------GSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTG  416 (1051)
T ss_pred             ----------CCchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcC
Confidence                      3568888888888888888988888777776665555433    57899999999999999999999999


Q ss_pred             ccccCCeEEEEEEecc----CCChhhHHHHHhhhhc--------------------------------------------
Q 003131          657 TLTQGRATVTTAKVFT----KMDRGEFLTLVASAEA--------------------------------------------  688 (845)
Q Consensus       657 TLT~~~~~v~~~~~~~----~~~~~~~~~~~~~~~~--------------------------------------------  688 (845)
                      |||+|+|.++++|...    ....+++-+...++..                                            
T Consensus       417 TLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~  496 (1051)
T KOG0210|consen  417 TLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEV  496 (1051)
T ss_pred             ccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceE
Confidence            9999999999998641    1112222222222211                                            


Q ss_pred             --cCCChhHHHHHHHHhhcCcCCCCC-CCCCCCCCccccCCCccccccccccccCCC-ceEEEEc--Ce--EEEEeehhh
Q 003131          689 --SSEHPLAKAVVEYARHFHFFDDPS-LNPDGQSHSKESTGSGWLLDVSDFSALPGR-GIQCFIS--GK--QVLVGNRKL  760 (845)
Q Consensus       689 --~s~~p~~~al~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-gi~~~~~--g~--~~~~g~~~~  760 (845)
                        ...+|.+.||+++.+..|..-..+ .+............++.++.+.+|++..++ ||.+.-.  |.  -++.|+...
T Consensus       497 sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~V  576 (1051)
T KOG0210|consen  497 SYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVV  576 (1051)
T ss_pred             EeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHH
Confidence              012344444443332222100000 000000001111224456677888877654 6666543  33  234454433


Q ss_pred             hhhcCCCCChhhHHHHHHHHHccCeEEEEEE---------------------------------------CCeEEEEEEe
Q 003131          761 LNESGITIPDHVESFVVELEESARTGILVAY---------------------------------------DDNLIGVMGI  801 (845)
Q Consensus       761 ~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~---------------------------------------~~~~lG~~~~  801 (845)
                      + +.-+...+++++...+++.+|.|++.+|.                                       |++++|+.++
T Consensus       577 M-s~iVq~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGV  655 (1051)
T KOG0210|consen  577 M-SGIVQYNDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGV  655 (1051)
T ss_pred             H-hcccccchhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccCh
Confidence            3 22234456778888899999999999987                                       6689999999


Q ss_pred             eCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          802 ADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       802 ~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      ||+|+++++.+++.||+|||++||||||..+||+.||+..++.
T Consensus       656 EDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~  698 (1051)
T KOG0210|consen  656 EDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLF  698 (1051)
T ss_pred             HHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccce
Confidence            9999999999999999999999999999999999999998874

>KOG0206 consensus P-type ATPase [General function prediction only]

Probab=100.00  E-value=7.6e-36  Score=349.30  Aligned_cols=437  Identities=17%  Similarity=0.194  Sum_probs=310.2

Q ss_pred             CCcchhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCc
Q 003131          393 WSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTK  472 (845)
Q Consensus       393 ~~~~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~  472 (845)
                      .+.......++++.+..+...+|.+.|++.++.+++      ..+.|.   +++.  ...+..+++|++||+|.+..++.
T Consensus        79 ~~~~~~~pl~~vl~~t~iKd~~eD~rR~~~D~~iN~------~~~~v~---~~~~--~~~~~~wk~~~vGd~v~v~~~~~  147 (1151)
T KOG0206|consen   79 NPYTTLVPLLFVLGITAIKDAIEDYRRHKQDKEVNN------RKVEVL---RGDG--CFVEKKWKDVRVGDIVRVEKDEF  147 (1151)
T ss_pred             CccceeeceeeeehHHHHHHHHhhhhhhhccHHhhc------ceeEEe---cCCc--eeeeeccceeeeeeEEEeccCCc
Confidence            334444455667777789999999999999998887      367776   4332  26889999999999999999999


Q ss_pred             cCccEEEEe-----cceeeeccccCCcceeeeccC---------------------------------------------
Q 003131          473 LPADGIVVW-----GTSYVNESMVTGEAVPVLKEI---------------------------------------------  502 (845)
Q Consensus       473 vPaDg~ll~-----G~~~Vdes~LTGEs~pv~k~~---------------------------------------------  502 (845)
                      +|||.+|++     |.|+|+.++|+||+....|+.                                             
T Consensus       148 ~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl  227 (1151)
T KOG0206|consen  148 VPADLLLLSSSDEDGICYVETANLDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPL  227 (1151)
T ss_pred             cccceEEecCCCCCceeEEEEeecCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCC
Confidence            999999997     779999999999998887732                                             


Q ss_pred             --CCceeccceeec-ceEEEEEEEecCccHHHHHHHHHHhhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhc
Q 003131          503 --NSPVIGGTINLH-GVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVL  579 (845)
Q Consensus       503 --~~~v~aGt~~~~-g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~  579 (845)
                        .+.++.|+.+.+ ..+.+.|+.+|.+|.+.+-   ...+..+++++++..++....++++.+.++++..+...++...
T Consensus       228 ~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n---~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~  304 (1151)
T KOG0206|consen  228 SPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN---SGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQ  304 (1151)
T ss_pred             cHHHcccCCceeccCcEEEEEEEEcCCcchHHHh---cCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeee
Confidence              112455665555 5678899999999977543   3346778999999999988888888887777776654433221


Q ss_pred             --CCCCCCcCCCCC---chHHHHHHHHhhhheeecccccchhhHHHHHHHHHHH----------HhcCeEEecchHHHhh
Q 003131          580 --GAYPEQWLPENG---THFVFALMFSISVVVIACPCALGLATPTAVMVATGVG----------ANNGVLIKGGDALERA  644 (845)
Q Consensus       580 --~~~~~~~~~~~~---~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~~----------~~~gilvk~~~~~e~l  644 (845)
                        ...+..|.....   ......+..++.++...+|..|-..+.+.-.......          ....+.+|..+..|.|
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeL  384 (1151)
T KOG0206|consen  305 DGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEEL  384 (1151)
T ss_pred             cccccCchhhhcCchHHHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhh
Confidence              111122222211   1334556667777777889888887777655544332          2467899999999999


Q ss_pred             cCCcEEEecCCCccccCCeEEEEEEeccC-----C----------C--------------------------------hh
Q 003131          645 QKIKYVIFDKTGTLTQGRATVTTAKVFTK-----M----------D--------------------------------RG  677 (845)
Q Consensus       645 g~v~~i~fDKTGTLT~~~~~v~~~~~~~~-----~----------~--------------------------------~~  677 (845)
                      |+|++|+.|||||||+|.|.+.++.+.+.     .          +                                ..
T Consensus       385 Gqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~  464 (1151)
T KOG0206|consen  385 GQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDIL  464 (1151)
T ss_pred             cceeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHH
Confidence            99999999999999999999998765310     0          0                                01


Q ss_pred             hHHHHHhh--------------hhccCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCC-
Q 003131          678 EFLTLVAS--------------AEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGR-  742 (845)
Q Consensus       678 ~~~~~~~~--------------~~~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-  742 (845)
                      +++...+.              +...+..|.+.|+++.|+..++....+....-..........+.++.+.+|.+.++| 
T Consensus       465 ~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRM  544 (1151)
T KOG0206|consen  465 EFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRM  544 (1151)
T ss_pred             HHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEecccccccee
Confidence            22222221              122346799999999999998754333222111111111224455666777765544 


Q ss_pred             ---------ceEEEEcCeEEEEeehhhhhhcCCCCChhhHHHHHHHHHccCeEEEEEE----------------------
Q 003131          743 ---------GIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAY----------------------  791 (845)
Q Consensus       743 ---------gi~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~----------------------  791 (845)
                               .+..++||++-.+-.+  +..++....+...+.+++++.+|+|++++||                      
T Consensus       545 SVIVR~p~g~i~LycKGADsvI~er--L~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~  622 (1151)
T KOG0206|consen  545 SVIVRDPDGRILLYCKGADSVIFER--LSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSL  622 (1151)
T ss_pred             EEEEEcCCCcEEEEEcCcchhhHhh--hhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhc
Confidence                     4555666664332111  1112222233345678899999999999988                      


Q ss_pred             ----------------CCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 003131          792 ----------------DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVID  845 (845)
Q Consensus       792 ----------------~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~~  845 (845)
                                      |+.++|..++||+|+++++++|+.|++||||+||||||..+||++||..|++.+
T Consensus       623 ~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~  692 (1151)
T KOG0206|consen  623 TDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLR  692 (1151)
T ss_pred             cCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCC
Confidence                            678999999999999999999999999999999999999999999999999853

>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=100.00  E-value=1.5e-35  Score=305.06  Aligned_cols=223  Identities=30%  Similarity=0.557  Sum_probs=202.0

Q ss_pred             HHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCe-EEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEe
Q 003131          403 MLITFVLFGKYLEILAKGKTSDAIKKLVELAPAT-ALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVW  481 (845)
Q Consensus       403 ~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~-~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~  481 (845)
                      +++++++++.+++.+.++|+.+.++++.++.+++ ++|+   |||   +++++++++|+|||+|.|++||++||||+|++
T Consensus         1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~---r~~---~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~   74 (230)
T PF00122_consen    1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVI---RDG---RWQKIPSSELVPGDIIILKAGDIVPADGILLE   74 (230)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEE---ETT---EEEEEEGGGT-TTSEEEEETTEBESSEEEEEE
T ss_pred             CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEE---ecc---ccccchHhhccceeeeecccccccccCcccee
Confidence            3567788999999999999999999999988887 7777   788   78999999999999999999999999999999


Q ss_pred             -cceeeeccccCCcceeeecc-----CCCceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCChhhHHHHHHh
Q 003131          482 -GTSYVNESMVTGEAVPVLKE-----INSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVA  555 (845)
Q Consensus       482 -G~~~Vdes~LTGEs~pv~k~-----~~~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~  555 (845)
                       |.+.||||.||||+.|+.|.     .++.+++||.+.+|++.++|+++|.+|..+++.+.+...+.+++++++..+++.
T Consensus        75 ~g~~~vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (230)
T PF00122_consen   75 SGSAYVDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIA  154 (230)
T ss_dssp             SSEEEEECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHH
Confidence             99999999999999999999     999999999999999999999999999999999999998888899999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHHHHHHhcCeEE
Q 003131          556 SIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLI  635 (845)
Q Consensus       556 ~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~~~~~gilv  635 (845)
                      .++.+++++++++++++|++.            ....+|...+..++++++.+|||+|++++|+++..+..++.++|+++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v  222 (230)
T PF00122_consen  155 KILIIIILAIAILVFIIWFFN------------DSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIV  222 (230)
T ss_dssp             HHHHHHHHHHHHHHHHHCHTG------------STTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred             HHHHhcccccchhhhccceec------------ccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEE
Confidence            999999999998888776652            11346778899999999999999999999999999999999999999


Q ss_pred             ecchHHHh
Q 003131          636 KGGDALER  643 (845)
Q Consensus       636 k~~~~~e~  643 (845)
                      |+++++|.
T Consensus       223 ~~~~a~E~  230 (230)
T PF00122_consen  223 KNLSALEA  230 (230)
T ss_dssp             SSTTHHHH
T ss_pred             eCcccccC
Confidence            99999995

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=99.80  E-value=1.6e-19  Score=184.23  Aligned_cols=167  Identities=34%  Similarity=0.533  Sum_probs=136.1

Q ss_pred             CcEEEecCCCccccCCeEEEEEEeccCCChhhHHHHHhhhhccCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCC
Q 003131          647 IKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTG  726 (845)
Q Consensus       647 v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (845)
                      |++||||||||||++++.+   ..   .....++.++...+..+.||+..++..++......                  
T Consensus         1 i~~i~fDktGTLt~~~~~v---~~---~~~~~~~~~~~~~~~~s~~p~~~~~~~~~~~~~~~------------------   56 (215)
T PF00702_consen    1 IDAICFDKTGTLTQGKMSV---AP---PSNEAALAIAAALEQGSEHPIGKAIVEFAKNHQWS------------------   56 (215)
T ss_dssp             ESEEEEECCTTTBESHHEE---ES---CSHHHHHHHHHHHHCTSTSHHHHHHHHHHHHHHHH------------------
T ss_pred             CeEEEEecCCCcccCeEEE---Ee---ccHHHHHHHHHHhhhcCCCcchhhhhhhhhhccch------------------
Confidence            5899999999999999999   11   56778899999999999999999999988765210                  


Q ss_pred             CccccccccccccCCCceEEEEcCeEEEEeehhhhhhcCCCCChhhHHHHHHHHHccCeEEEEEECCeEEEEEEeeCCCC
Q 003131          727 SGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVK  806 (845)
Q Consensus       727 ~~~~~~~~~~~~~~g~gi~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~lG~~~~~D~lr  806 (845)
                          ..+.++....+.|+...+++. +. |+..++...+... .............+...+.++.++.++|.+.+.|++|
T Consensus        57 ----~~~~~~~~~~~~~~~~~~~~~-~~-g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  129 (215)
T PF00702_consen   57 ----KSLESFSEFIGRGISGDVDGI-YL-GSPEWIHELGIRV-ISPDLVEEIQESQGRTVIVLAVNLIFLGLFGLRDPLR  129 (215)
T ss_dssp             ----SCCEEEEEETTTEEEEEEHCH-EE-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCEEEEESHEEEEEEEEEEEBH
T ss_pred             ----hhhhhheeeeecccccccccc-cc-ccchhhhhccccc-cccchhhhHHHhhCCcccceeecCeEEEEEeecCcch
Confidence                015677888999999999888 44 8888876643321 1111222334556777888888999999999999999


Q ss_pred             hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          807 REAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       807 ~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      ++++++|+.|+++|++++|+|||+..+|.++|+++||.
T Consensus       130 ~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~  167 (215)
T PF00702_consen  130 PGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF  167 (215)
T ss_dssp             TTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC
T ss_pred             hhhhhhhhhhhccCcceeeeeccccccccccccccccc
Confidence            99999999999999999999999999999999999994

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=99.55  E-value=3.4e-14  Score=160.40  Aligned_cols=144  Identities=42%  Similarity=0.680  Sum_probs=133.3

Q ss_pred             EEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhhcccCCCCCCCCc
Q 003131           47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGPKPQG  126 (845)
Q Consensus        47 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~~~~~  126 (845)
                      +-.+++.||+|++|+..+|+.+++.+|+.++.+.+..+++++.||+...+.+.+.+.++++||.++..+.....    ++
T Consensus        70 ~~~l~v~GmtC~scv~~i~~~l~~~~gv~~~~val~~~~~~v~~dp~v~s~~~~~e~ie~~gf~a~~i~~~~~~----~~  145 (951)
T KOG0207|consen   70 KCYLSVNGMTCASCVATIERNLRKIEGVESAVVALSASKAEVIYDPAVTSPDSIAESIEDLGFSAELIESVNGN----SN  145 (951)
T ss_pred             eeEEEecCceeHHHHHHHHHHhhccCCcceEEEEeeccceeEEECCcccCchhHHHHHHhcCccceehhcccCC----CC
Confidence            55699999999999999999999999999999999999999999999999999999999999999877654321    11


Q ss_pred             eeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       127 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                       ..+.|.|.||.|++|+.+||+.+.+++||.+.+++..++++.|.|||..++++++.+.++..||++..
T Consensus       146 -~~i~L~v~g~~c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~~~~pr~i~k~ie~~~~~~~~  213 (951)
T KOG0207|consen  146 -QKIYLDVLGMTCASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPEITGPRDIIKAIEETGFEASV  213 (951)
T ss_pred             -CcEEEEeecccccchhhhhHHHHhhccCeeEEEEeccCCceEEEecccccChHHHHHHHHhhccccee
Confidence             56789999999999999999999999999999999999999999999999999999999999999875

>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures

Probab=99.21  E-value=3.7e-11  Score=95.28  Aligned_cols=62  Identities=45%  Similarity=0.737  Sum_probs=59.4

Q ss_pred             ccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCc
Q 003131          131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFE  192 (845)
Q Consensus       131 ~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~  192 (845)
                      +|+|+||+|++|+.+|+++|.+++||.++.+|+.++++.|.|+++..++++|.+.|+++||+
T Consensus         1 t~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~~~i~~~i~~~Gy~   62 (62)
T PF00403_consen    1 TFKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSIEKIIEAIEKAGYE   62 (62)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCHHHHHHHHHHTTSE
T ss_pred             CEEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCHHHHHHHHHHhCcC
Confidence            36889999999999999999999999999999999999999999888999999999999995

These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....

>PRK10671 copA copper exporting ATPase; Provisional

Probab=99.16  E-value=3.4e-10  Score=137.61  Aligned_cols=142  Identities=29%  Similarity=0.495  Sum_probs=112.7

Q ss_pred             eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhhcccCC---C-C
Q 003131           46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESST---S-G  121 (845)
Q Consensus        46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~---~-~  121 (845)
                      ++.++.|+||+|++|+.+|++++++++||.++.+++.  +..+..   ..+.+++.+.++++||.++..+++..   . .
T Consensus         3 ~~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~~--~~~v~~---~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~~~~   77 (834)
T PRK10671          3 QTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSIT--EAHVTG---TASAEALIETIKQAGYDASVSHPKAKPLTESS   77 (834)
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCcceEEEeee--EEEEEe---cCCHHHHHHHHHhcCCcccccccccccccccc
Confidence            4678999999999999999999999999999999984  444443   24678999999999999876431110   0 0


Q ss_pred             -------------C--CCCceeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHH
Q 003131          122 -------------P--KPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAI  186 (845)
Q Consensus       122 -------------~--~~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i  186 (845)
                                   +  +.....+..+.++||+|++|+..+++.+.+.+||.++.+++.+++..+.+   ..+.+++.+.+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~---~~s~~~I~~~I  154 (834)
T PRK10671         78 IPSEALTAASEELPAATADDDDSQQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMG---SASPQDLVQAV  154 (834)
T ss_pred             cCchhhhhhhhhccccccCcCceEEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEc---cCCHHHHHHHH
Confidence                         0  00011245688999999999999999999999999999999999988873   24678888889


Q ss_pred             HhcCCceee
Q 003131          187 EDAGFEASF  195 (845)
Q Consensus       187 ~~~G~~~~~  195 (845)
                      +++||.+.+
T Consensus       155 ~~~Gy~a~~  163 (834)
T PRK10671        155 EKAGYGAEA  163 (834)
T ss_pred             HhcCCCccc
Confidence            999998754

>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures

Probab=99.11  E-value=3.3e-10  Score=89.78  Aligned_cols=62  Identities=44%  Similarity=0.670  Sum_probs=59.0

Q ss_pred             EEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcc
Q 003131           49 QVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFE  110 (845)
Q Consensus        49 ~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~  110 (845)
                      +|.|.||+|++|+.+|+++|.++|||.++.+|+.++++++.+++...+++++.+.++++||+
T Consensus         1 t~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~~~i~~~i~~~Gy~   62 (62)
T PF00403_consen    1 TFKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSIEKIIEAIEKAGYE   62 (62)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCHHHHHHHHHHTTSE
T ss_pred             CEEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCHHHHHHHHHHhCcC
Confidence            48899999999999999999999999999999999999999988878889999999999995

These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....

>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.07  E-value=4.7e-10  Score=90.74  Aligned_cols=67  Identities=33%  Similarity=0.554  Sum_probs=63.3

Q ss_pred             eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      ...+.++||+|.+|+.+|+++|++++||.++++++..+++.|.||+...+.++|++++++.||.+..
T Consensus         3 ~~~l~v~~MtC~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~~~~~~~i~~ai~~aGy~~~~   69 (71)
T COG2608           3 KTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAIEDAGYKVEE   69 (71)
T ss_pred             eEEEEECCcCcHHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCCcCCHHHHHHHHHHcCCCeee
Confidence            4578999999999999999999999999999999999999999999889999999999999998754

>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.06  E-value=7.1e-10  Score=89.72  Aligned_cols=68  Identities=44%  Similarity=0.663  Sum_probs=63.5

Q ss_pred             ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchh
Q 003131           45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE  112 (845)
Q Consensus        45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~  112 (845)
                      +++..+.++||+|.+|+..++++|.+++||.++++++..+.+.+.++....+.+++.+++++.||.+.
T Consensus         1 ~~~~~l~v~~MtC~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~~~~~~~i~~ai~~aGy~~~   68 (71)
T COG2608           1 MMKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAIEDAGYKVE   68 (71)
T ss_pred             CceEEEEECCcCcHHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCCcCCHHHHHHHHHHcCCCee
Confidence            35677999999999999999999999999999999999999999999878999999999999999874

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.00  E-value=8.8e-06  Score=94.85  Aligned_cols=66  Identities=44%  Similarity=0.732  Sum_probs=61.0

Q ss_pred             eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCC-HHHHHHHHHhcCCceee
Q 003131          129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVIS-KDDIANAIEDAGFEASF  195 (845)
Q Consensus       129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~-~~~i~~~i~~~G~~~~~  195 (845)
                      +..+.++||+|++|+++|| ++++++||.++.+|+.++++.+.||+...+ .+++...+++.||.+..
T Consensus         3 ~~~l~v~Gm~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~~~~~~~~~~~~v~~~gy~~~~   69 (713)
T COG2217           3 ETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLPADIVAAVEKAGYSARL   69 (713)
T ss_pred             eeEEeecCcCcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEecccccccHHHHHHHHHhcCccccc
Confidence            4578999999999999999 999999999999999999999999987666 78999999999998763

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=97.93  E-value=0.0057  Score=73.56  Aligned_cols=66  Identities=29%  Similarity=0.498  Sum_probs=58.0

Q ss_pred             eeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       128 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      .+..+.++||+|++|++++++.+.+.+||.++.+++.+++..+.|++.. . +++.+.+++.||++..
T Consensus        53 ~r~~l~V~Gm~C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~~-~-~~I~~aI~~~Gy~a~~  118 (741)
T PRK11033         53 TRYSWKVSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDI-R-AQVESAVQKAGFSLRD  118 (741)
T ss_pred             ceEEEEECCCCcHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEecccc-h-HHHHHHHHhccccccc
Confidence            4567889999999999999999999999999999999999999998763 3 7777888999998753

>TIGR00003 copper ion binding protein

Probab=97.35  E-value=0.0013  Score=51.41  Aligned_cols=66  Identities=35%  Similarity=0.538  Sum_probs=55.9

Q ss_pred             eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcch
Q 003131           46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA  111 (845)
Q Consensus        46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~  111 (845)
                      ++..+.+.|++|..|...+++.+...+++....+++......+.+++.......+...+...||.+
T Consensus         2 ~~~~~~v~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   67 (68)
T TIGR00003         2 QKFTVQVMSMTCQHCVDKIEKFVGELEGVSKVQVKLEKASVKVEFDAPQATEICIAEAILDAGYEV   67 (68)
T ss_pred             cEEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEcCCCEEEEEeCCCCCCHHHHHHHHHHcCCCc
Confidence            455699999999999999999999999999999999999999988765556677777777788754

This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases.

>TIGR00003 copper ion binding protein

Probab=97.29  E-value=0.0011  Score=51.76  Aligned_cols=64  Identities=34%  Similarity=0.510  Sum_probs=56.7

Q ss_pred             eccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCce
Q 003131          130 GQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA  193 (845)
Q Consensus       130 ~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~  193 (845)
                      ..+.+.|+.|..|+..+++.+...+++....+++..+.+.+.|++.......+...+...||.+
T Consensus         4 ~~~~v~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   67 (68)
T TIGR00003         4 FTVQVMSMTCQHCVDKIEKFVGELEGVSKVQVKLEKASVKVEFDAPQATEICIAEAILDAGYEV   67 (68)
T ss_pred             EEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEcCCCEEEEEeCCCCCCHHHHHHHHHHcCCCc
Confidence            3578999999999999999999999999999999999999999877667788877788888864

This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases.

>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism]

Probab=97.01  E-value=0.0016  Score=61.63  Aligned_cols=63  Identities=33%  Similarity=0.693  Sum_probs=56.3

Q ss_pred             eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      ..+|.| .|+|.+|+..+++.|+.++||.++++++....+.|.   ....+.+|.+.|+.+|-++.+
T Consensus         8 ~~efaV-~M~cescvnavk~~L~~V~Gi~~vevdle~q~v~v~---ts~p~s~i~~~le~tGr~Avl   70 (247)
T KOG4656|consen    8 EAEFAV-QMTCESCVNAVKACLKGVPGINSVEVDLEQQIVSVE---TSVPPSEIQNTLENTGRDAVL   70 (247)
T ss_pred             eEEEEE-echhHHHHHHHHHHhccCCCcceEEEEhhhcEEEEE---ccCChHHHHHHHHhhChheEE
Confidence            456676 699999999999999999999999999999999999   456789999999999998864

>PLN02957 copper, zinc superoxide dismutase

Probab=97.00  E-value=0.0027  Score=65.02  Aligned_cols=66  Identities=26%  Similarity=0.450  Sum_probs=58.2

Q ss_pred             eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeecc
Q 003131          129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQS  198 (845)
Q Consensus       129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~  198 (845)
                      ++.+.+ +|.|.+|+.++++.+.+++||..+.+++..+++.|.|+   ...+++.+.+++.||.+.+...
T Consensus         7 ~~~~~V-gMsC~~Ca~~Iek~L~~~~GV~~v~vn~~~~~v~V~~~---~~~~~I~~aIe~~Gy~a~~~~~   72 (238)
T PLN02957          7 LTEFMV-DMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGS---SPVKAMTAALEQTGRKARLIGQ   72 (238)
T ss_pred             EEEEEE-CccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEec---CCHHHHHHHHHHcCCcEEEecC
Confidence            456777 69999999999999999999999999999999999983   4678899999999999876544

>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism]

Probab=96.83  E-value=0.0042  Score=58.85  Aligned_cols=65  Identities=31%  Similarity=0.522  Sum_probs=55.7

Q ss_pred             ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131           45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI  113 (845)
Q Consensus        45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  113 (845)
                      .-+.+|.| .|+|.+|+..+++.|+..+|+.++++++..+.+.+.   +...++++.+.++.+|-++.+
T Consensus         6 ~~~~efaV-~M~cescvnavk~~L~~V~Gi~~vevdle~q~v~v~---ts~p~s~i~~~le~tGr~Avl   70 (247)
T KOG4656|consen    6 TYEAEFAV-QMTCESCVNAVKACLKGVPGINSVEVDLEQQIVSVE---TSVPPSEIQNTLENTGRDAVL   70 (247)
T ss_pred             ceeEEEEE-echhHHHHHHHHHHhccCCCcceEEEEhhhcEEEEE---ccCChHHHHHHHHhhChheEE
Confidence            34566777 599999999999999999999999999999999886   345678999999999987644

>PLN02957 copper, zinc superoxide dismutase

Probab=96.83  E-value=0.0047  Score=63.24  Aligned_cols=67  Identities=24%  Similarity=0.369  Sum_probs=57.7

Q ss_pred             eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhhcc
Q 003131           46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAE  116 (845)
Q Consensus        46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~  116 (845)
                      +++.+.+ +|+|..|+..+++.+.+.+||..+.+++..+++.+.++   ...+++.+.+++.||.+++...
T Consensus         6 ~~~~~~V-gMsC~~Ca~~Iek~L~~~~GV~~v~vn~~~~~v~V~~~---~~~~~I~~aIe~~Gy~a~~~~~   72 (238)
T PLN02957          6 LLTEFMV-DMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGS---SPVKAMTAALEQTGRKARLIGQ   72 (238)
T ss_pred             EEEEEEE-CccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEec---CCHHHHHHHHHHcCCcEEEecC
Confidence            4556888 79999999999999999999999999999999999872   4678888999999999866543

>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism]

Probab=96.82  E-value=0.0035  Score=51.07  Aligned_cols=52  Identities=19%  Similarity=0.438  Sum_probs=48.4

Q ss_pred             CccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcC
Q 003131          136 GMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG  190 (845)
Q Consensus       136 gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G  190 (845)
                      .|||..|..++++.+..++||.++.++...+++++.-+   .++..+.+.+++.|
T Consensus        12 ~~~C~gc~~kV~~~l~~~~GV~~v~id~~~~kvtV~g~---~~p~~vl~~l~k~~   63 (73)
T KOG1603|consen   12 NMHCEGCARKVKRVLQKLKGVESVDIDIKKQKVTVKGN---VDPVKLLKKLKKTG   63 (73)
T ss_pred             CcccccHHHHHHHHhhccCCeEEEEecCCCCEEEEEEe---cCHHHHHHHHHhcC
Confidence            89999999999999999999999999999999999943   78899999998876

>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism]

Probab=96.45  E-value=0.0063  Score=49.57  Aligned_cols=56  Identities=25%  Similarity=0.433  Sum_probs=49.3

Q ss_pred             EEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcC
Q 003131           50 VGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAG  108 (845)
Q Consensus        50 ~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G  108 (845)
                      ...-.|||.+|...+++.++.++||.++.++...+++++.-.   .++..+.+.+.+.|
T Consensus         8 v~kv~~~C~gc~~kV~~~l~~~~GV~~v~id~~~~kvtV~g~---~~p~~vl~~l~k~~   63 (73)
T KOG1603|consen    8 VLKVNMHCEGCARKVKRVLQKLKGVESVDIDIKKQKVTVKGN---VDPVKLLKKLKKTG   63 (73)
T ss_pred             EEEECcccccHHHHHHHHhhccCCeEEEEecCCCCEEEEEEe---cCHHHHHHHHHhcC
Confidence            334489999999999999999999999999999999999743   67889999998866

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=92.62  E-value=0.18  Score=50.63  Aligned_cols=43  Identities=16%  Similarity=0.153  Sum_probs=41.5

Q ss_pred             CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 003131          803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVID  845 (845)
Q Consensus       803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~~  845 (845)
                      .+++|++.+.++.+|++|.+|+++||-...-+..+|+++|++.
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~  118 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDY  118 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCch
Confidence            8999999999999999999999999999999999999999873

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=91.63  E-value=0.2  Score=49.52  Aligned_cols=38  Identities=18%  Similarity=0.298  Sum_probs=36.3

Q ss_pred             hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          807 REAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       807 ~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +++.+.|+.++++|++++++||+....+..+|+.+||+
T Consensus        92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~  129 (192)
T PF12710_consen   92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGID  129 (192)
T ss_dssp             TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSS
T ss_pred             hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCC
Confidence            77779999999999999999999999999999999986

>TIGR02052 MerP mercuric transport protein periplasmic component

Probab=91.15  E-value=1.3  Score=37.13  Aligned_cols=66  Identities=33%  Similarity=0.544  Sum_probs=52.5

Q ss_pred             eccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          130 GQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       130 ~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      ..+.+.++.|..|...++..+...+++.....+.......+.+++.......+...+++.||...+
T Consensus        25 ~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   90 (92)
T TIGR02052        25 VTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEKTNVKALTEATTDAGYPSSL   90 (92)
T ss_pred             EEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence            356689999999999999999999999888999888888887766544566666666778887543

This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403).

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=90.91  E-value=0.55  Score=41.89  Aligned_cols=52  Identities=15%  Similarity=0.175  Sum_probs=47.9

Q ss_pred             CCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          792 DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       792 ~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      -+++.+.++---++=++++++|++|+.. +++.+-|||..-+-...|+-+||+
T Consensus        18 ~~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~   69 (152)
T COG4087          18 AGKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIP   69 (152)
T ss_pred             cceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCc
Confidence            4577788888888899999999999999 999999999999999999999986

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=90.91  E-value=0.46  Score=45.15  Aligned_cols=47  Identities=15%  Similarity=0.261  Sum_probs=38.4

Q ss_pred             CCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          792 DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       792 ~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +++.++.+.+.|.    .  +|++|++.|+++.++||++...+..+.+++|+.
T Consensus        22 ~~~~~~~~~~~~~----~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~   68 (154)
T TIGR01670        22 NGEEIKAFNVRDG----Y--GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT   68 (154)
T ss_pred             CCcEEEEEechhH----H--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC
Confidence            4455555544443    2  999999999999999999999999999999985

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=90.05  E-value=0.53  Score=47.63  Aligned_cols=41  Identities=20%  Similarity=0.221  Sum_probs=39.2

Q ss_pred             CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +++|++++.++.|++.|+++.++||.+...+..+.+.+|+.
T Consensus        85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~  125 (219)
T TIGR00338        85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLD  125 (219)
T ss_pred             CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999999999985

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=89.92  E-value=1.6  Score=40.95  Aligned_cols=66  Identities=17%  Similarity=0.209  Sum_probs=58.4

Q ss_pred             HHHHHccCeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          777 VELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       777 ~~~~~~g~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +.+.+.|.+.+.+--|.+++..  =....-|++++-++.++.+|+++.++|--++.-+..+++.+|++
T Consensus        21 ~~L~~~Gikgvi~DlDNTLv~w--d~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~   86 (175)
T COG2179          21 DILKAHGIKGVILDLDNTLVPW--DNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP   86 (175)
T ss_pred             HHHHHcCCcEEEEeccCceecc--cCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc
Confidence            4678899999999999998765  24567899999999999999999999999999999999999985

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=89.88  E-value=0.59  Score=42.67  Aligned_cols=44  Identities=11%  Similarity=0.100  Sum_probs=40.6

Q ss_pred             EeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 003131          800 GIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCV  843 (845)
Q Consensus       800 ~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI  843 (845)
                      ....++++++++.+++|++.|++++++||-....+..+.+++|+
T Consensus        20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~   63 (139)
T cd01427          20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGL   63 (139)
T ss_pred             cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCC
Confidence            34568999999999999999999999999999999999999887

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>PF00873 ACR_tran: AcrB/AcrD/AcrF family; InterPro: IPR001036 The Escherichia coli acrA and acrB genes encode a multi-drug efflux system that is believed to protect the bacterium against hydrophobic inhibitors []

Probab=89.75  E-value=51  Score=41.96  Aligned_cols=199  Identities=17%  Similarity=0.225  Sum_probs=101.0

Q ss_pred             EEEEEeCCCCch----hhHHHHHHhhhCCCCceEEEEEeeccEEEEE--ECCCCCCHH----HHHHHHHhcCc--chhhh
Q 003131           47 RIQVGVTGMTCA----ACSNSVEGALMGLKGVAKASVALLQNKADVV--FDPDLVKDE----DIKNAIEDAGF--EAEIL  114 (845)
Q Consensus        47 ~~~~~v~gm~C~----~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~--~~~~~~~~~----~i~~~i~~~Gy--~~~~~  114 (845)
                      .+...-+|.+-.    .-...+|++++.++|+.++.-.-..+...+.  ++.+ .+.+    ++.+.+...--  .....
T Consensus        44 ~V~~~~pgas~~~ve~~vt~plE~~l~~v~gv~~i~S~s~~g~s~i~v~f~~~-~d~~~a~~~v~~~i~~~~~~LP~~~~  122 (1021)
T PF00873_consen   44 SVTTSYPGASPEEVEQLVTKPLEEALSSVEGVKEIRSTSREGSSSITVEFDDG-TDIDEALQEVREKIDQIRSDLPPGVE  122 (1021)
T ss_dssp             EEEEE-TTS-HHHHHHHTHHHHHHTHCSSTTEEEEEEEETTSEEEEEEEESTT-S-HHHHHHHHHHHHHHHGGGS-HHHH
T ss_pred             EEEEecCcCCHHHHHHHHHHHHHHHHcCCCCeEEEEEEecCCcEEEEEEeccc-cCHHHHHHHHHHHHHhhhhhCccccc
Confidence            344555665533    3456788899999999999887666655544  5544 3443    45555554421  11110


Q ss_pred             cccCC-CCCCCCceeeeccccC--Cccc----hhhHHHHHHHhcCCCCeeeEEeec-CCCeEEEEeCCC-----CCCHHH
Q 003131          115 AESST-SGPKPQGTIVGQYTIG--GMTC----AACVNSVEGILRGLPGVKRAVVAL-ATSLGEVEYDPT-----VISKDD  181 (845)
Q Consensus       115 ~~~~~-~~~~~~~~~~~~~~v~--gm~C----~~C~~~ie~~l~~~~GV~~~~v~~-~~~~~~v~~~~~-----~~~~~~  181 (845)
                      .+.-. ........-.+.+.-+  +++-    ....+.++..|++++||.++++.- ..+.+.|.+||+     .++..+
T Consensus       123 ~p~i~~~~~~~~~i~~~~l~~~~~~~~~~~l~~~~~~~l~~~L~~i~gV~~v~~~G~~~~ei~i~~d~~kl~~~gls~~~  202 (1021)
T PF00873_consen  123 EPQIFKFDPSDSPIMILALTSDDGTLDLKELRDYAEEQLKPRLERIPGVARVDISGGREREIQIELDPEKLAAYGLSLSD  202 (1021)
T ss_dssp             HHEEEEEEEECCEEEEEEEEESSSSS-HHHHHHHHHHCTHHHHHTSTTEEEEEESSS--EEEEEEE-HHHHHHTT--HHH
T ss_pred             CCceeeccCCCceeEEEEeccCCCCCCHHHHHHHHHHHHHHhccceeEEEEEEeccchhhhhhheechhhhhhhCCCHHH
Confidence            00000 0000011112222222  1121    113457899999999999999874 556788999984     478889


Q ss_pred             HHHHHHhcCCceeeec-cCCcceeEEEEecccchhhhHHHHhhhc--------cCCCceEEEeecCCCeEEEEeCC
Q 003131          182 IANAIEDAGFEASFVQ-SSGQDKILLQVTGVLCELDAHFLEGILS--------NFKGVRQFRFDKISGELEVLFDP  248 (845)
Q Consensus       182 i~~~i~~~G~~~~~~~-~~~~~~~~~~v~gm~c~~c~~~ie~~l~--------~~~gV~~~~v~~~~~~~~V~~d~  248 (845)
                      +.++|.+.......-. ..+..+..++..|....  .+.+++..-        .+..|-+++..........+++.
T Consensus       203 v~~~l~~~n~~~~~G~~~~~~~~~~i~~~~~~~~--~~~l~~~~i~~~~g~~i~L~dvA~V~~~~~~~~~~~~~nG  276 (1021)
T PF00873_consen  203 VAQALQANNVNQPAGTIEEGNQEILIRVDGEFKS--LEDLENIPIRNSDGRPIRLKDVATVEDGYEDPTSIARFNG  276 (1021)
T ss_dssp             HHHHHHHHSCEEEEEEETTTTEEEEEEECES--S--HHHHHT-EEEETTSEEEEGGGTEEEEEEESSSSEEEEETT
T ss_pred             HHHHHHHhhhhccCCccchhhHHHhhhhhhhcCC--hhhhceeEEEeccccccccccceEEEeecccchhhhhccc
Confidence            9999988776553311 12234445555544332  233443332        12234455555555555566654

The E. coli AcrB protein is a transporter that is energized by proton-motive force and that shows the widest substrate specificity among all known multidrug pumps, ranging from most of the currently used antibiotics, disinfectants, dyes, and detergents to simple solvents. The structure of ligand-free AcrB shows that it is a homotrimer of 110kDa per subunit. Each subunit contains 12 transmembrane helices and two large periplasmic domains (each exceeding 300 residues) between helices 1 and 2, and helices 7 and 8. X-ray analysis of the overexpressed AcrB protein demonstrated that the three periplasmic domains form, in the centre, a funnel-like structure and a connected narrow (or closed) pore. The pore is opened to the periplasm through three vestibules located at subunit interfaces. These vestibules were proposed to allow direct access of drugs from the periplasm as well as the outer leaflet of the cytoplasmic membrane. The three transmembrane domains of AcrB protomers form a large, 30A-wide central cavity that spans the cytoplasmic membrane and extends to the cytoplasm X-ray crystallographic structures of the trimeric AcrB pump from E. coli with four structurally diverse ligands demonstrated that three molecules of ligand bind simultaneously to the extremely large central cavity of 5000 cubic angstroms, primarily by hydrophobic, aromatic stacking and van der Waals interactions. Each ligand uses a slightly different subset of AcrB residues for binding. The bound ligand molecules often interact with each other, stabilising the binding. ; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 2V50_B 1T9U_A 2HRT_B 3NOC_A 3NOG_A 4DX7_A 1OYD_A 3AOB_A 1T9V_A 4DX6_B ....

>TIGR02052 MerP mercuric transport protein periplasmic component

Probab=89.65  E-value=2.4  Score=35.43  Aligned_cols=65  Identities=37%  Similarity=0.593  Sum_probs=48.5

Q ss_pred             EEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcch
Q 003131           47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA  111 (845)
Q Consensus        47 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~  111 (845)
                      ...+.+.++.|..|...++..+...+++....++.......+.++........+.....+.||..
T Consensus        24 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   88 (92)
T TIGR02052        24 TVTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEKTNVKALTEATTDAGYPS   88 (92)
T ss_pred             EEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCe
Confidence            34577999999999999999999999988888888787766665443334555555556677764

This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403).

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=88.93  E-value=0.56  Score=46.75  Aligned_cols=45  Identities=18%  Similarity=0.079  Sum_probs=41.4

Q ss_pred             eeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 003131          801 IADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVID  845 (845)
Q Consensus       801 ~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~~  845 (845)
                      +..++++++.+.|+.+++.|++++++||-....+..+++.+|+++
T Consensus        84 ~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~  128 (202)
T TIGR01490        84 IESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN  128 (202)
T ss_pred             HHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc
Confidence            456799999999999999999999999999999999999999863

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=88.63  E-value=0.78  Score=44.53  Aligned_cols=40  Identities=20%  Similarity=0.217  Sum_probs=37.9

Q ss_pred             CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          805 VKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       805 lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +++++.+.++.|++.|+++.++||.....+..+++.+|+.
T Consensus        74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~  113 (177)
T TIGR01488        74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID  113 (177)
T ss_pred             cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence            6899999999999999999999999999999999999875

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=88.61  E-value=0.86  Score=43.69  Aligned_cols=41  Identities=15%  Similarity=0.200  Sum_probs=39.3

Q ss_pred             CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      .+-|++++.++.|++.|.++.++||--..-+..||.++||+
T Consensus        88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~  128 (227)
T KOG1615|consen   88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIP  128 (227)
T ss_pred             ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCc
Confidence            56799999999999999999999999999999999999997

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=88.35  E-value=1.1  Score=41.26  Aligned_cols=59  Identities=19%  Similarity=0.198  Sum_probs=45.9

Q ss_pred             EEEEEECCeEEEEEEe-----eCCCChhHHHHHHHHHhCCCeEEEEcCCC--------HHHHHHHHHHcCCC
Q 003131          786 GILVAYDDNLIGVMGI-----ADPVKREAAVVVEGLLKMGVRPVMVTGDN--------WRTAHAVAREVCVI  844 (845)
Q Consensus       786 ~l~va~~~~~lG~~~~-----~D~lr~~~~~~I~~L~~~gi~v~mlTGD~--------~~tA~~iA~~~GI~  844 (845)
                      .+.+-.|+++..-...     +-++.|++.++++.|++.|+++.++|+..        .....++.+.+|+.
T Consensus         2 ~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~   73 (132)
T TIGR01662         2 GVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP   73 (132)
T ss_pred             EEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC
Confidence            4666777777742111     24678999999999999999999999998        77788888888764

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=86.91  E-value=1.1  Score=44.43  Aligned_cols=41  Identities=22%  Similarity=0.231  Sum_probs=38.8

Q ss_pred             CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +++|++.+.++.|++.|+++.++|+-....+..+++.+|+.
T Consensus        80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~  120 (201)
T TIGR01491        80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPD  120 (201)
T ss_pred             CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999999999999975

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>PLN02954 phosphoserine phosphatase

Probab=86.61  E-value=1.2  Score=45.29  Aligned_cols=41  Identities=17%  Similarity=0.144  Sum_probs=38.9

Q ss_pred             CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +++|+++++++.|++.|+++.++||.....+..+.+.+|+.
T Consensus        84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~  124 (224)
T PLN02954         84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP  124 (224)
T ss_pred             CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence            47899999999999999999999999999999999999985

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=86.23  E-value=2.7  Score=40.65  Aligned_cols=64  Identities=17%  Similarity=0.221  Sum_probs=51.1

Q ss_pred             HHHccCeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCC
Q 003131          779 LEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDN-WRTAHAVAREVCVI  844 (845)
Q Consensus       779 ~~~~g~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~-~~tA~~iA~~~GI~  844 (845)
                      +.+.+.+.+.+..|+++.-.  =...+-+++.++++.|++.|+++.++|+-+ ...+..+.+.+|+.
T Consensus        20 ~~~~~v~~vv~D~Dgtl~~~--~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~   84 (170)
T TIGR01668        20 LKKVGIKGVVLDKDNTLVYP--DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP   84 (170)
T ss_pred             HHHCCCCEEEEecCCccccC--CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence            34578888888888776522  133688999999999999999999999988 67788888888863

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>PRK06769 hypothetical protein; Validated

Probab=85.90  E-value=1.2  Score=43.12  Aligned_cols=49  Identities=12%  Similarity=0.037  Sum_probs=40.7

Q ss_pred             cCeEEEEEECCeEEEEEEeeC----CCChhHHHHHHHHHhCCCeEEEEcCCCH
Q 003131          783 ARTGILVAYDDNLIGVMGIAD----PVKREAAVVVEGLLKMGVRPVMVTGDNW  831 (845)
Q Consensus       783 g~~~l~va~~~~~lG~~~~~D----~lr~~~~~~I~~L~~~gi~v~mlTGD~~  831 (845)
                      |++++.+-.|+++.|--.+.+    ++.|++++++++|++.|+++.++|....
T Consensus         3 ~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~   55 (173)
T PRK06769          3 NIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG   55 (173)
T ss_pred             CCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence            678899999999877644332    3689999999999999999999998764

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=85.83  E-value=1.8  Score=44.16  Aligned_cols=56  Identities=20%  Similarity=0.279  Sum_probs=47.8

Q ss_pred             eEEEEEECCeEEEEEEeeCC-CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          785 TGILVAYDDNLIGVMGIADP-VKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       785 ~~l~va~~~~~lG~~~~~D~-lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +.+++-.|++++-    .|. +.+.+.++|++|++.|+++++.||=....+..+++++|+.
T Consensus         4 kli~~DlDGTLl~----~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   60 (230)
T PRK01158          4 KAIAIDIDGTITD----KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS   60 (230)
T ss_pred             eEEEEecCCCcCC----CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence            4566677888863    333 7899999999999999999999999999999999999875

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=85.29  E-value=1.8  Score=45.52  Aligned_cols=57  Identities=12%  Similarity=0.131  Sum_probs=48.1

Q ss_pred             eEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          785 TGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       785 ~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +.+++-.|++++.-   .+.+.++++++|++|++.|+++++.||-....+..+.+++|+.
T Consensus         5 kli~~DlDGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~   61 (273)
T PRK00192          5 LLVFTDLDGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE   61 (273)
T ss_pred             eEEEEcCcccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence            45666668888742   3457788999999999999999999999999999999999975

>TIGR01684 viral_ppase viral phosphatase

Probab=85.12  E-value=2.1  Score=44.53  Aligned_cols=57  Identities=18%  Similarity=0.165  Sum_probs=48.3

Q ss_pred             eEEEEEECCeEEEEEEeeCC--CC-hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          785 TGILVAYDDNLIGVMGIADP--VK-REAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       785 ~~l~va~~~~~lG~~~~~D~--lr-~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      .++++-.|++++.-   +.+  +| |++.+++++|++.|+++.+.|+=....+...-+++||.
T Consensus       127 kvIvFDLDgTLi~~---~~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd  186 (301)
T TIGR01684       127 HVVVFDLDSTLITD---EEPVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLD  186 (301)
T ss_pred             eEEEEecCCCCcCC---CCccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCC
Confidence            46778888887544   433  67 99999999999999999999988888888899999986

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=85.01  E-value=1.5  Score=43.81  Aligned_cols=40  Identities=13%  Similarity=0.082  Sum_probs=37.7

Q ss_pred             CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +++|++++.|+.||+.| ++.++||-....+..+++++||+
T Consensus        68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~  107 (203)
T TIGR02137        68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFP  107 (203)
T ss_pred             CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCc
Confidence            57999999999999975 99999999999999999999986

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>PRK14054 methionine sulfoxide reductase A; Provisional

Probab=84.63  E-value=1.7  Score=41.63  Aligned_cols=48  Identities=25%  Similarity=0.383  Sum_probs=42.0

Q ss_pred             hhhHHHHHHHhcCCCCeeeEEeecCCCe-------------------EEEEeCCCCCCHHHHHHHHH
Q 003131          140 AACVNSVEGILRGLPGVKRAVVALATSL-------------------GEVEYDPTVISKDDIANAIE  187 (845)
Q Consensus       140 ~~C~~~ie~~l~~~~GV~~~~v~~~~~~-------------------~~v~~~~~~~~~~~i~~~i~  187 (845)
                      +.|-|-+|..+.+++||.++.+-++.+.                   +.|.|||..++.++|++..=
T Consensus        10 gGCFWg~E~~f~~~~GV~~t~vGYagG~~~~PtY~~Vcsg~tgh~E~V~V~yDp~~isy~~Ll~~f~   76 (172)
T PRK14054         10 GGCFWGMEAPFDRVKGVISTRVGYTGGHVENPTYEQVCSGTTGHAEAVEITYDPAVISYRELLELFF   76 (172)
T ss_pred             cCChhhhHHHHccCCCEEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence            4688999999999999999998877765                   89999999999999988653

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=84.55  E-value=2  Score=44.98  Aligned_cols=57  Identities=18%  Similarity=0.236  Sum_probs=48.8

Q ss_pred             eEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          785 TGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       785 ~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +.+++-.|++++.-   ...+-+.++++|++|++.|+++++.||=....+..+.+++|+.
T Consensus         4 kli~~DlDGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   60 (270)
T PRK10513          4 KLIAIDMDGTLLLP---DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHME   60 (270)
T ss_pred             EEEEEecCCcCcCC---CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCC
Confidence            45666678888742   3468899999999999999999999999999999999999874

>PRK10976 putative hydrolase; Provisional

Probab=83.66  E-value=2.4  Score=44.42  Aligned_cols=57  Identities=14%  Similarity=0.154  Sum_probs=48.1

Q ss_pred             eEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          785 TGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       785 ~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +.+++-.|++++--   ...+-+.++++|++|++.|+++++.||=....+..+.+++|++
T Consensus         3 kli~~DlDGTLl~~---~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   59 (266)
T PRK10976          3 QVVASDLDGTLLSP---DHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIK   59 (266)
T ss_pred             eEEEEeCCCCCcCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence            34566678888732   3358899999999999999999999999999999999999875

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=83.64  E-value=2.8  Score=43.77  Aligned_cols=57  Identities=18%  Similarity=0.152  Sum_probs=46.7

Q ss_pred             eEEEEEECCeEEEEEEeeCC--CC-hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          785 TGILVAYDDNLIGVMGIADP--VK-REAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       785 ~~l~va~~~~~lG~~~~~D~--lr-~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +++++-.|++++--   +.+  +| |++.+++++|+++|+++.++|+-+...+..+-+++|+.
T Consensus       129 ~~i~~D~D~TL~~~---~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~  188 (303)
T PHA03398        129 HVIVFDLDSTLITD---EEPVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLE  188 (303)
T ss_pred             cEEEEecCCCccCC---CCccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCC
Confidence            45677778887544   444  46 99999999999999999999977777888899988885

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=83.05  E-value=2.6  Score=44.30  Aligned_cols=57  Identities=9%  Similarity=0.059  Sum_probs=48.3

Q ss_pred             eEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          785 TGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       785 ~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +.+++-.|++++.-   ...+-+.++++|++|++.|+++++.||=+...+..+.+++|+.
T Consensus         3 kli~~DlDGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   59 (272)
T PRK15126          3 RLAAFDMDGTLLMP---DHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLD   59 (272)
T ss_pred             cEEEEeCCCcCcCC---CCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Confidence            34556668888742   3359999999999999999999999999999999999999875

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=82.69  E-value=2.2  Score=43.24  Aligned_cols=42  Identities=10%  Similarity=0.038  Sum_probs=39.2

Q ss_pred             CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      .++.|++.+.++.|++.|+++.++||........+.+..|+.
T Consensus        92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~  133 (226)
T PRK13222         92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA  133 (226)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence            568999999999999999999999999999999999998875

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=82.46  E-value=3.5  Score=43.19  Aligned_cols=57  Identities=16%  Similarity=0.221  Sum_probs=48.2

Q ss_pred             eEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          785 TGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       785 ~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +.+++-.|++++.   =...+-++++++|++|++.|+++++.||=+...+..+.+++|+.
T Consensus         4 kli~~DlDGTLl~---~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~   60 (272)
T PRK10530          4 RVIALDLDGTLLT---PKKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALD   60 (272)
T ss_pred             cEEEEeCCCceEC---CCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence            4566677888863   12358899999999999999999999999999999999999874

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=82.05  E-value=3.1  Score=43.73  Aligned_cols=58  Identities=12%  Similarity=0.054  Sum_probs=48.4

Q ss_pred             CeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          784 RTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       784 ~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      .+.+++-.|++++.-   ...+-+.++++|++|++.|+++++.||=....+..+++++|++
T Consensus         7 ~~lI~~DlDGTLL~~---~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~   64 (271)
T PRK03669          7 PLLIFTDLDGTLLDS---HTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ   64 (271)
T ss_pred             CeEEEEeCccCCcCC---CCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence            456677778888641   2345578999999999999999999999999999999999974

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=81.80  E-value=2.3  Score=41.61  Aligned_cols=42  Identities=10%  Similarity=0.084  Sum_probs=39.1

Q ss_pred             CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      -++++++.+.++.|++.|+++.++|+.+......+.+..|+.
T Consensus        71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~  112 (188)
T TIGR01489        71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEK  112 (188)
T ss_pred             CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCCh
Confidence            489999999999999999999999999999999999988874

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=81.16  E-value=0.81  Score=39.89  Aligned_cols=46  Identities=15%  Similarity=0.167  Sum_probs=33.7

Q ss_pred             EEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCC
Q 003131          799 MGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVA---REVCVI  844 (845)
Q Consensus       799 ~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA---~~~GI~  844 (845)
                      +...+.+=|+++++|++|++.|++++++|-....+...++   +.+||.
T Consensus         9 l~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~   57 (101)
T PF13344_consen    9 LYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP   57 (101)
T ss_dssp             SEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred             eEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence            3456778899999999999999999999988866655555   445553

...

>TIGR00915 2A0602 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family

Probab=80.82  E-value=1.7e+02  Score=37.23  Aligned_cols=141  Identities=14%  Similarity=0.183  Sum_probs=78.0

Q ss_pred             EEEEEeCCCCchh----hHHHHHHhhhCCCCceEEEEEe---eccEEEEEECCCCCCH----HHHHHHHHhc--Ccchhh
Q 003131           47 RIQVGVTGMTCAA----CSNSVEGALMGLKGVAKASVAL---LQNKADVVFDPDLVKD----EDIKNAIEDA--GFEAEI  113 (845)
Q Consensus        47 ~~~~~v~gm~C~~----C~~~ie~~l~~~~gv~~~~v~~---~~~~~~v~~~~~~~~~----~~i~~~i~~~--Gy~~~~  113 (845)
                      .+...-+|.+-..    -...+|++++.++|+.++...-   ......+.++.+. +.    .++.+.+...  .+....
T Consensus        44 ~V~~~~pGas~~~ve~~vt~plE~~l~~v~gv~~i~S~s~~~g~s~i~v~f~~~~-d~~~a~~~v~~~l~~~~~~LP~~~  122 (1044)
T TIGR00915        44 TVSASYPGASAQTVQDTVTQVIEQQMNGIDGLRYMSSESDSDGSMTITLTFEQGT-DPDIAQVQVQNKLQLATPLLPQEV  122 (1044)
T ss_pred             EEEEecCCCCHHHHHHHHHHHHHHHhcCCCCceEEEEEEcCCCeEEEEEEEECCC-ChHHHHHHHHHHHHHHHhhCCCcc
Confidence            3444456655433    3456678899999999887643   2345556665432 32    3455555432  111110


Q ss_pred             hcccCCCCCCCCceeeeccccCC----ccc----hhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCC-----CCCHH
Q 003131          114 LAESSTSGPKPQGTIVGQYTIGG----MTC----AACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPT-----VISKD  180 (845)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~v~g----m~C----~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~-----~~~~~  180 (845)
                       +................+.+.+    .+-    ..=.+.++..|++++||.++++.-..+.+.|..||+     .+++.
T Consensus       123 -~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~L~~~~~~~l~~~L~~v~GV~~V~~~G~~~ei~V~vD~~kl~~~gls~~  201 (1044)
T TIGR00915       123 -QRQGVRVEKASSNFLMVIGLVSTDGSMTKEDLSDYIASNMVDPISRLEGVGDVQLFGSQYAMRIWLDPAKLNSYQLTPA  201 (1044)
T ss_pred             -cCCCcEEeCCCCCceEEEEEEcCCCCCCHHHHHHHHHHHHHHHHhCCCCceEEEecCCceEEEEEECHHHHHHcCCCHH
Confidence             0000000000000011222211    111    112356889999999999999987777799999985     37888


Q ss_pred             HHHHHHHhc
Q 003131          181 DIANAIEDA  189 (845)
Q Consensus       181 ~i~~~i~~~  189 (845)
                      ++.+.|+..
T Consensus       202 dV~~~i~~~  210 (1044)
T TIGR00915       202 DVISAIQAQ  210 (1044)
T ss_pred             HHHHHHHHh
Confidence            999999864

This family is one of several subfamilies within the scope of pfam model pfam00873.

>PRK05528 methionine sulfoxide reductase A; Provisional

Probab=80.67  E-value=3.3  Score=39.04  Aligned_cols=48  Identities=23%  Similarity=0.449  Sum_probs=40.6

Q ss_pred             hhhHHHHHHHhcCCCCeeeEEeecCCC--------------eEEEEeCCCCCCHHHHHHHHH
Q 003131          140 AACVNSVEGILRGLPGVKRAVVALATS--------------LGEVEYDPTVISKDDIANAIE  187 (845)
Q Consensus       140 ~~C~~~ie~~l~~~~GV~~~~v~~~~~--------------~~~v~~~~~~~~~~~i~~~i~  187 (845)
                      +.|-|-+|..+.+++||.++.+-++.+              .+.|.|||..++.++|++..=
T Consensus         8 gGCFWg~E~~f~~l~GV~~t~vGYagG~~~~p~~~~tgH~E~V~V~yDp~~isy~~LL~~f~   69 (156)
T PRK05528          8 GGCLWGVQAFFKTLPGVIHTEAGRANGRTSTLDGPYDGYAECVKTHFDPRMVSITDLMGYLF   69 (156)
T ss_pred             cCCchhhHHHHhcCCCEEEEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCcCCHHHHHHHHH
Confidence            468899999999999999988876553              488999999999999988653

>COG2177 FtsX Cell division protein [Cell division and chromosome partitioning]

Probab=80.59  E-value=83  Score=33.37  Aligned_cols=78  Identities=17%  Similarity=0.256  Sum_probs=47.8

Q ss_pred             hhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeeccCC--cceeEEEEecccchhhh
Q 003131          140 AACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSG--QDKILLQVTGVLCELDA  217 (845)
Q Consensus       140 ~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~~--~~~~~~~v~gm~c~~c~  217 (845)
                      ..|...+++.+++.+||++++.-              ...+.+.+..+..|+......+++  +....+++..   +...
T Consensus        71 ~~~~~~v~~~i~~~~gV~~v~~~--------------sre~~l~~L~~~lg~~~~~~l~~nPLP~~~vV~~~~---p~~~  133 (297)
T COG2177          71 QDDAALVREKIEGIPGVKSVRFI--------------SREEALKELQPWLGFGALLMLDENPLPDVFVVTPDD---PPQV  133 (297)
T ss_pred             hHHHHHHHHHHhcCCCcceEEEe--------------CHHHHHHHHHHHcCchhhhcCCCCCCCceEEEEeCC---CccH
Confidence            88999999999999999986652              123444555567888611111112  2333333322   5556


Q ss_pred             HHHHhhhccCCCceEEE
Q 003131          218 HFLEGILSNFKGVRQFR  234 (845)
Q Consensus       218 ~~ie~~l~~~~gV~~~~  234 (845)
                      ..+.+.+..++||.+++
T Consensus       134 ~~i~~~l~~l~gV~~V~  150 (297)
T COG2177         134 KAIAAALRDLPGVAEVD  150 (297)
T ss_pred             HHHHHHHHcCccceehh
Confidence            66777777777776654

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=80.57  E-value=2.6  Score=42.72  Aligned_cols=42  Identities=10%  Similarity=0.021  Sum_probs=39.2

Q ss_pred             CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      -++.|++.++++.|++.|+++.++|+........+.+++||.
T Consensus        91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~  132 (222)
T PRK10826         91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLR  132 (222)
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcch
Confidence            578899999999999999999999999999999999999875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	845
3j09_A	723	High Resolution Helical Reconstruction Of The Bacte		3e-88
3j08_A	645	High Resolution Helical Reconstruction Of The Bacte		2e-86
3rfu_A	736	Crystal Structure Of A Copper-Transporting Pib-Type		1e-78
3a1c_A	287	Crystal Structure Of The P- And N-Domains Of Copa,		1e-29
3a1e_A	287	Crystal Structure Of The P- And N-Domains Of His462		7e-29
2b8e_A	273	Copa Atp Binding Domain Length = 273		6e-25
2kij_A	124	Solution Structure Of The Actuator Domain Of The Co		2e-23
3skx_A	280	Crystal Structure Of The Atp Binding Domain Of Arch		7e-23
3sky_A	274	2.1a Crystal Structure Of The Phosphate Bound Atp B		9e-23
2ew9_A	149	Solution Structure Of Apowln5-6 Length = 149		9e-23
2ew9_A	149	Solution Structure Of Apowln5-6 Length = 149		3e-14
3dxs_X	74	Crystal Structure Of A Copper Binding Domain From H		3e-22
3dxs_X	74	Crystal Structure Of A Copper Binding Domain From H		2e-06
2hc8_A	113	Structure Of The A. Fulgidus Copa A-Domain Length =		8e-20
2rop_A	202	Solution Structure Of Domains 3 And 4 Of Human Atp7		4e-17
2rop_A	202	Solution Structure Of Domains 3 And 4 Of Human Atp7		8e-09
2rml_A	147	Solution Structure Of The N-Terminal Soluble Domain		6e-16
1p6t_A	151	Structure Characterization Of The Water Soluble Reg		9e-16
2koy_A	141	Structure Of The E1064a Mutant Of The N-Domain Of W		5e-12
1aw0_A	72	Fourth Metal-Binding Domain Of The Menkes Copper- T		1e-11
2ggp_B	72	Solution Structure Of The Atx1-Cu(I)-Ccc2a Complex		4e-11
2ggp_B	72	Solution Structure Of The Atx1-Cu(I)-Ccc2a Complex		4e-07
1fvs_A	72	Solution Structure Of The Yeast Copper Transporter		4e-11
1fvs_A	72	Solution Structure Of The Yeast Copper Transporter		4e-07
1mhs_A	920	Model Of Neurospora Crassa Proton Atpase Length = 9		7e-11
1yju_A	75	Solution Structure Of The Apo Form Of The Sixth Sol		3e-10
1yju_A	75	Solution Structure Of The Apo Form Of The Sixth Sol		2e-09
1yjr_A	75	Solution Structure Of The Apo Form Of The Sixth Sol		1e-09
1yjr_A	75	Solution Structure Of The Apo Form Of The Sixth Sol		6e-09
2arf_A	165	Solution Structure Of The Wilson Atpase N-Domain In		1e-09
3b8e_A	998	Crystal Structure Of The Sodium-Potassium Pump Leng		7e-09
3ixz_A	1034	Pig Gastric H+K+-Atpase Complexed With Aluminium Fl		1e-08
2kmv_A	185	Solution Structure Of The Nucleotide Binding Domain		1e-08
2iye_A	263	Structure Of Catalytic Cpx-atpase Domain Copb-b Len		1e-08
2yj4_A	263	Conformational Changes In The Catalytic Domain Of T		4e-08
2yj3_A	263	Conformational Changes In The Catalytic Domain Of T		5e-08
3n23_A	992	Crystal Structure Of The High Affinity Complex Betw		6e-08
2zxe_A	1028	Crystal Structure Of The Sodium - Potassium Pump In		6e-08
1q8l_A	84	Second Metal Binding Domain Of The Menkes Atpase Le		1e-07
1q8l_A	84	Second Metal Binding Domain Of The Menkes Atpase Le		5e-06
1s6o_A	76	Solution Structure And Backbone Dynamics Of The Apo		1e-07
1s6o_A	76	Solution Structure And Backbone Dynamics Of The Apo		5e-06
1kvi_A	79	Solution Structure Of The Reduced Form Of The First		1e-06
2k1r_A	73	The Solution Nmr Structure Of The Complex Between M		1e-06
2ldi_A	71	Nmr Solution Structure Of Ziaan Sub Mutant Length =		1e-06
2ldi_A	71	Nmr Solution Structure Of Ziaan Sub Mutant Length =		2e-05
1y3k_A	77	Solution Structure Of The Apo Form Of The Fifth Dom		2e-06
2ofh_X	111	Solution Structure Of The N-Terminal Domain Of The		3e-06
2ofh_X	111	Solution Structure Of The N-Terminal Domain Of The		4e-05
2ofg_X	111	Solution Structure Of The N-Terminal Domain Of The		3e-06
2ofg_X	111	Solution Structure Of The N-Terminal Domain Of The		4e-05
3cjk_B	75	Crystal Structure Of The Adduct Hah1-Cd(Ii)-Mnk1 Le		5e-06
1p8g_A	73	The Solution Structure Of Apo Copz From Bacillus Su		5e-06
1p8g_A	73	The Solution Structure Of Apo Copz From Bacillus Su		3e-04
2qif_A	69	Crystal Structure Of A Metallochaperone With A Tetr		5e-06
2qif_A	69	Crystal Structure Of A Metallochaperone With A Tetr		5e-04
2voy_J	118	Cryoem Model Of Copa, The Copper Transporting Atpas		6e-06
1kqk_A	80	Solution Structure Of The N-Terminal Domain Of A Po		6e-06
2voy_A	80	Cryoem Model Of Copa, The Copper Transporting Atpas		7e-06
2l3m_A	71	Solution Structure Of The Putative Copper-Ion-Bindi		7e-06
1opz_A	76	A Core Mutation Affecting The Folding Properties Of		2e-05
1opz_A	76	A Core Mutation Affecting The Folding Properties Of		5e-05
1afi_A	72	Structure Of The Reduced Form Of Merp, The Periplas		2e-04
2dqs_A	995	Crystal Structure Of The Calcium Pump With Amppcp I		3e-04
1kju_A	994	Ca2+-Atpase In The E2 State Length = 994		3e-04
3b8c_A	885	Crystal Structure Of A Plasma Membrane Proton Pump		3e-04
1osd_A	72	Crystal Structure Of Oxidized Merp From Ralstonia M		8e-04

>pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723

Iteration: 1
 Score =  323 bits (827), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 226/638 (35%), Positives = 346/638 (54%), Gaps = 73/638 (11%)
Query: 206 LQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSN 265
           ++VTG+ C +    +E  + + +GV + R +  +    + FD + +   ++   I     
Sbjct: 6   VRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGY 65
Query: 266 GKFQIRVMNPFARMTSRDSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRC 325
           G     V++  A +++ + E  S M R    + F  + + F+      I L Y       
Sbjct: 66  G-----VVDEQAAVSA-EVEHLSRMKRKLYVAAFAGVLLLFL---AHFISLPYE------ 110
Query: 326 GPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALL 385
                 D++   +     F  G   + AA  ALR  + NMDV+ ++G  AA+  SV +  
Sbjct: 111 ------DFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFLASVLST- 163
Query: 386 YGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKD-- 443
            GV+   +S  ++ETS +L+ F+L G+ LE  AK +T +AIKKLV L   TA+ V++D  
Sbjct: 164 AGVLPREYS--FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAV-VIRDGK 220
Query: 444 KVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEIN 503
           ++   +EE       +  GD + V PG K+P DG+VV G SYV+ESM++GE VPVLK   
Sbjct: 221 EIAVPVEE-------VAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKG 273
Query: 504 SPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVV 563
             V G TIN  GVL I+AT+VG + +L+QI+ LVE A  SK PIQ+ AD V + F+P V+
Sbjct: 274 DEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVL 333
Query: 564 TLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMV 623
            +A+  ++ WY    +   P           +FA    I+V+V+ACPCA GLATPTA+ V
Sbjct: 334 LVAISAFIYWY---FIAHAP----------LLFAFTTLIAVLVVACPCAFGLATPTALTV 380
Query: 624 ATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLV 683
             G GA  G+LIK  DALE A+K+  VIFDKTGTLT+G+  VT   V    D  E L L 
Sbjct: 381 GMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDL-VPLNGDERELLRLA 439
Query: 684 ASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRG 743
           A AE  SEHP+A+A+V+ A                 H  E      L +      + G G
Sbjct: 440 AIAERRSEHPIAEAIVKKALE---------------HGIE------LGEPEKVEVIAGEG 478
Query: 744 IQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIAD 803
           +        +LVGN++L+ + G+ + + VE  + +LE  A+T ++VA +  + G++ ++D
Sbjct: 479 VVA----DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSD 534
Query: 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREV 841
            +K  A   V+ L +MG++  M+TGDNWR+A A++RE+
Sbjct: 535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL 572

>pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645

Iteration: 1
 Score =  317 bits (812), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 202/500 (40%), Positives = 293/500 (58%), Gaps = 52/500 (10%)
Query: 344 FVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAM 403
           F  G   + AA  ALR  + NMDV+ ++G  AA+  SV +   GV+   +S  ++ETS +
Sbjct: 45  FYSGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFLASVLST-AGVLPREYS--FYETSVL 101
Query: 404 LITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKD--KVGKCIEEREIDALLIQS 461
           L+ F+L G+ LE  AK +T +AIKKLV L   TA+ V++D  ++   +EE       +  
Sbjct: 102 LLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAV-VIRDGKEIAVPVEE-------VAV 153
Query: 462 GDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQA 521
           GD + V PG K+P DG+VV G SYV+ESM++GE VPVLK     V G TIN  GVL I+A
Sbjct: 154 GDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRA 213
Query: 522 TKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGA 581
           T+VG + +L+QI+ LVE A  SK PIQ+ AD V + F+P V+ +A+  ++ WY    +  
Sbjct: 214 TRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWY---FIAH 270
Query: 582 YPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDAL 641
            P           +FA    I+V+V+ACPCA GLATPTA+ V  G GA  G+LIK  DAL
Sbjct: 271 AP----------LLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADAL 320
Query: 642 ERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEY 701
           E A+K+  VIFDKTGTLT+G+  VT   V    D  E L L A AE  SEHP+A+A+V+ 
Sbjct: 321 EVAEKVTAVIFDKTGTLTKGKPEVTDL-VPLNGDERELLRLAAIAERRSEHPIAEAIVKK 379
Query: 702 ARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLL 761
           A                 H  E      L +      + G G+        +LVGN++L+
Sbjct: 380 ALE---------------HGIE------LGEPEKVEVIAGEGVVA----DGILVGNKRLM 414
Query: 762 NESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGV 821
            + G+ + + VE  + +LE  A+T ++VA +  + G++ ++D +K  A   V+ L +MG+
Sbjct: 415 EDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGI 474
Query: 822 RPVMVTGDNWRTAHAVAREV 841
           +  M+TGDNWR+A A++RE+
Sbjct: 475 KVGMITGDNWRSAEAISREL 494

>pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736

Iteration: 1
 Score =  291 bits (745), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 202/567 (35%), Positives = 300/567 (52%), Gaps = 65/567 (11%)
Query: 284 SEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGD---WLNWALVS 340
           S E  +M R F  +L L+IPV  + +    +             F+ G+   W+   L +
Sbjct: 75  SPEYLDMRRRFWIALMLTIPVVILEMGGHGLK-----------HFISGNGSSWIQLLLAT 123
Query: 341 VVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVV--TGFWS---- 394
            V    G  F+    ++L+ G  NM  L+A+G   A+ YS+ A+L+  V    F S    
Sbjct: 124 PVVLWGGWPFFKRGWQSLKTGQLNMFTLIAMGIGVAWIYSMVAVLWPGVFPHAFRSQEGV 183
Query: 395 -PTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEERE 453
              YFE +A++ T VL G+ LE+ A+ +T  AI+ L++L P +A  + +D       E E
Sbjct: 184 VAVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDG-----SEEE 238
Query: 454 IDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINL 513
           +    +  GD L+V PG K+P DG V  G S+V+ESMVTGE +PV KE ++ VIG TIN 
Sbjct: 239 VSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSFVDESMVTGEPIPVAKEASAKVIGATINQ 298
Query: 514 HGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCW 573
            G   ++A  VGSD +L++I+ +V  AQ S+APIQ+ AD V+  FVP V+ +A+ +++ W
Sbjct: 299 TGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVW 358
Query: 574 YVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGV 633
               +LG  P            + L+ ++SV++IACPCALGLATP ++MV  G GA +GV
Sbjct: 359 ---ALLGPQPA---------LSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGV 406
Query: 634 LIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHP 693
           LIK  +ALER +K+  ++ DKTGTLT+G   +T   V         L L A+ E  SEHP
Sbjct: 407 LIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRI-VTDDFVEDNALALAAALEHQSEHP 465
Query: 694 LAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQV 753
           LA A+V  A+                    S GS     V  F A  G+G+   + G  V
Sbjct: 466 LANAIVHAAKEKGL----------------SLGS-----VEAFEAPTGKGVVGQVDGHHV 504
Query: 754 LVGNRKLLNESGITIPDHVESF--VVELEESARTGILVAYDDNLIGVMGIADPVKREAAV 811
            +GN +L+ E G    D+   F    EL     + + +A D   + ++ + DP+K     
Sbjct: 505 AIGNARLMQEHG---GDNAPLFEKADELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPE 561
Query: 812 VVEGLLKMGVRPVMVTGDNWRTAHAVA 838
            +  L + G+  VM+TGD+ RTA AVA
Sbjct: 562 TILELQQSGIEIVMLTGDSKRTAEAVA 588

>pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287

Iteration: 1
 Score =  129 bits (323), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 119/215 (55%), Gaps = 28/215 (13%)
Query: 628 GANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAE 687
           GA  G+LIK  DALE A+K+  VIFDKTGTLT+G+  VT   V    D  E L L A AE
Sbjct: 13  GAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDL-VPLNGDERELLRLAAIAE 71
Query: 688 ASSEHPLAKAVVEYA-RHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQC 746
             SEHP+A+A+V+ A  H     +P                           + G G+  
Sbjct: 72  RRSEHPIAEAIVKKALEHGIELGEPE----------------------KVEVIAGEGVVA 109
Query: 747 FISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVK 806
                 +LVGN++L+ + G+ + + VE  + +LE  A+T ++VA +  + G++ ++D +K
Sbjct: 110 ----DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLK 165
Query: 807 REAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREV 841
             A   V+ L +MG++  M+TGDNWR+A A++RE+
Sbjct: 166 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL 200

>pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287

Iteration: 1
 Score =  125 bits (315), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 77/215 (35%), Positives = 118/215 (54%), Gaps = 28/215 (13%)
Query: 628 GANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAE 687
           GA  G+LIK  DALE A+K+  VIFDKTGTLT+G+  VT   V    D  E L L A AE
Sbjct: 13  GAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDL-VPLNGDERELLRLAAIAE 71
Query: 688 ASSEHPLAKAVVEYA-RHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQC 746
             SE P+A+A+V+ A  H     +P                           + G G+  
Sbjct: 72  RRSEQPIAEAIVKKALEHGIELGEPE----------------------KVEVIAGEGVVA 109
Query: 747 FISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVK 806
                 +LVGN++L+ + G+ + + VE  + +LE  A+T ++VA +  + G++ ++D +K
Sbjct: 110 ----DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLK 165
Query: 807 REAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREV 841
             A   V+ L +MG++  M+TGDNWR+A A++RE+
Sbjct: 166 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL 200

>pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273

Iteration: 1
 Score =  112 bits (281), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 28/207 (13%)
Query: 636 KGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLA 695
           K  DALE A+K+  VIFDKTGTLT+G+  VT   V    D  E L L A AE  SEHP+A
Sbjct: 1   KNADALEVAEKVTAVIFDKTGTLTKGKPEVTDL-VPLNGDERELLRLAAIAERRSEHPIA 59
Query: 696 KAVVEYA-RHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVL 754
           +A+V+ A  H     +P                           + G G+        +L
Sbjct: 60  EAIVKKALEHGIELGEPE----------------------KVEVIAGEGVVA----DGIL 93
Query: 755 VGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVE 814
           VGN++L  + G+ + + VE  + +LE  A+T ++VA +  + G++ ++D +K  A   V+
Sbjct: 94  VGNKRLXEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQ 153
Query: 815 GLLKMGVRPVMVTGDNWRTAHAVAREV 841
            L + G++   +TGDNWR+A A++RE+
Sbjct: 154 ELKRXGIKVGXITGDNWRSAEAISREL 180

>pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124

Iteration: 1
 Score =  108 bits (269), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/119 (48%), Positives = 78/119 (65%)
Query: 423 SDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWG 482
           S+A+ KL+ L    A +V  D     + E ++D  L+Q GD +KV+PG K P DG V+ G
Sbjct: 6   SEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEG 65
Query: 483 TSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQ 541
            S V+ES++TGEA+PV K+  S VI G+IN +G L I AT VG+D  LSQI+ LVE AQ
Sbjct: 66  HSMVDESLITGEAMPVAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEAQ 124

>pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280

Iteration: 1
 Score =  105 bits (263), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 113/206 (54%), Gaps = 26/206 (12%)
Query: 640 ALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVV 699
           A ERA+ ++ VIFDKTGTLT+GR  VT    F   +  E L + AS EA SEHP+A A+V
Sbjct: 6   AFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNHSE-DELLQIAASLEARSEHPIAAAIV 64
Query: 700 EYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRK 759
           E A                    E  G G L +V +F A+PG+G++  ++G++ +V +  
Sbjct: 65  EEA--------------------EKRGFG-LTEVEEFRAIPGKGVEGIVNGRRYMVVSPG 103
Query: 760 LLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKM 819
            + E GI   + VE    +L++  +T + +  +  + GV+ +AD ++ E+   +  L  +
Sbjct: 104 YIRELGIKTDESVE----KLKQQGKTVVFILKNGEVSGVIALADRIRPESREAISKLKAI 159
Query: 820 GVRPVMVTGDNWRTAHAVAREVCVID 845
           G++ +M+TGDN   A  VA E+ + D
Sbjct: 160 GIKCMMLTGDNRFVAKWVAEELGLDD 185

>pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274

Iteration: 1
 Score =  105 bits (263), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 113/206 (54%), Gaps = 26/206 (12%)
Query: 640 ALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVV 699
           A ERA+ ++ VIFDKTGTLT+GR  VT    F   +  E L + AS EA SEHP+A A+V
Sbjct: 6   AFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNHSE-DELLQIAASLEARSEHPIAAAIV 64
Query: 700 EYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRK 759
           E A                    E  G G L +V +F A+PG+G++  ++G++ +V +  
Sbjct: 65  EEA--------------------EKRGFG-LTEVEEFRAIPGKGVEGIVNGRRYMVVSPG 103
Query: 760 LLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKM 819
            + E GI   + VE    +L++  +T + +  +  + GV+ +AD ++ E+   +  L  +
Sbjct: 104 YIRELGIKTDESVE----KLKQQGKTVVFILKNGEVSGVIALADRIRPESREAISKLKAI 159
Query: 820 GVRPVMVTGDNWRTAHAVAREVCVID 845
           G++ +M+TGDN   A  VA E+ + D
Sbjct: 160 GIKCMMLTGDNRFVAKWVAEELGLDD 185

>pdb|2EW9|A Chain A, Solution Structure Of Apowln5-6 Length = 149

Iteration: 1
 Score =  105 bits (263), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 59/146 (40%), Positives = 88/146 (60%), Gaps = 6/146 (4%)
Query: 52  VTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA 111
           + GMTCA+C +++E  L    GV    VAL+  KA++ +DP++++  +I   I+D GFEA
Sbjct: 10  IKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEA 69
Query: 112 EILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVE 171
            ++ + + S     G I  + TI GMTCA+CV+++E  L    G+  A VALATS   V+
Sbjct: 70  AVMEDYAGS----DGNI--ELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVK 123
Query: 172 YDPTVISKDDIANAIEDAGFEASFVQ 197
           +DP +I   DI   IE+ GF AS  Q
Sbjct: 124 FDPEIIGPRDIIKIIEEIGFHASLAQ 149

>pdb|2EW9|A Chain A, Solution Structure Of Apowln5-6 Length = 149

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
Query: 134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
           I GMTCA+CV+++E  L+   GV   +VAL     E++YDP VI   +IA  I+D GFEA
Sbjct: 10  IKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEA 69
Query: 194 SFVQS-SGQD-KILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEAL 251
           + ++  +G D  I L +TG+ C    H +E  L+   G+        + +  V FDPE +
Sbjct: 70  AVMEDYAGSDGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEII 129
Query: 252 SSRSLV 257
             R ++
Sbjct: 130 GPRDII 135

>pdb|3DXS|X Chain X, Crystal Structure Of A Copper Binding Domain From Hma7, A P- Type Atpase Length = 74

Iteration: 1
 Score =  103 bits (258), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/72 (84%), Positives = 66/72 (91%)
Query: 45  MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAI 104
           MR+IQVGVTGMTCAACSNSVE ALM + GV KASVALLQN+ADVVFDP+LVK+EDIK  I
Sbjct: 1   MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEI 60
Query: 105 EDAGFEAEILAE 116
           EDAGFEAEILAE
Sbjct: 61  EDAGFEAEILAE 72

>pdb|3DXS|X Chain X, Crystal Structure Of A Copper Binding Domain From Hma7, A P- Type Atpase Length = 74

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 43/66 (65%)
Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
           Q  + GMTCAAC NSVE  L  + GV +A VAL  +  +V +DP ++ ++DI   IEDAG
Sbjct: 5   QVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAG 64
Query: 191 FEASFV 196
           FEA  +
Sbjct: 65  FEAEIL 70

>pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113

Iteration: 1
 Score = 95.9 bits (237), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 57/118 (48%), Positives = 76/118 (64%), Gaps = 8/118 (6%)
Query: 424 DAIKKLVELAPATALLVVKDK-VGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWG 482
           +AIKKLV L   TA+++   K +   +EE       +  GD + V PG K+P DG+VV G
Sbjct: 1   EAIKKLVGLQAKTAVVIRDGKEIAVPVEE-------VAVGDIVIVRPGEKIPVDGVVVEG 53
Query: 483 TSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETA 540
            SYV+ESM++GE VPVLK     V G TIN  GVL I+AT+VG + +L+QI+ LVE A
Sbjct: 54  ESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDA 111

>pdb|2ROP|A Chain A, Solution Structure Of Domains 3 And 4 Of Human Atp7b Length = 202

Iteration: 1
 Score = 87.0 bits (214), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 20/178 (11%)
Query: 42  GDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIK 101
           G  +  +Q+ + GM C +C  ++E  +  L GV    V+L    A V +DP       ++
Sbjct: 16  GSHVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQ 75
Query: 102 NAIE---DAGFEAEILAESSTSGP----------------KPQGTIVGQY-TIGGMTCAA 141
            AIE      F+  +   +  SG                 + QGT       I GMTCA+
Sbjct: 76  RAIEALPPGNFKVSLPDGAEGSGTDHRSSSSHSPGSPPRNQVQGTCSTTLIAIAGMTCAS 135
Query: 142 CVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSS 199
           CV+S+EG++  L GV++  V+LA     V Y+P VIS +++  AIED GFEAS V  S
Sbjct: 136 CVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVSES 193

>pdb|2ROP|A Chain A, Solution Structure Of Domains 3 And 4 Of Human Atp7b Length = 202

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 45/168 (26%), Positives = 70/168 (41%), Gaps = 28/168 (16%)
Query: 117 SSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTV 176
           S T G +    +  Q  I GM C +CV ++E  +  L GV+   V+L     +V+YDP+ 
Sbjct: 9   SETLGHQGSHVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSC 68
Query: 177 ISKDDIANAIE---DAGFEASF---VQSSGQD----------------------KILLQV 208
            S   +  AIE      F+ S     + SG D                        L+ +
Sbjct: 69  TSPVALQRAIEALPPGNFKVSLPDGAEGSGTDHRSSSSHSPGSPPRNQVQGTCSTTLIAI 128
Query: 209 TGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSL 256
            G+ C    H +EG++S  +GV+Q       G   VL++P  +S   L
Sbjct: 129 AGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEEL 176

>pdb|2RML|A Chain A, Solution Structure Of The N-Terminal Soluble Domains Of Bacillus Subtilis Copa Length = 147

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 14/147 (9%)
Query: 46  RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIE 105
           + I + V+GMTCAAC+  +E  L  + GV  A+V L    ++V++DP       I+  IE
Sbjct: 6   KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETSNVIYDPAETGTAAIQEKIE 65
Query: 106 DAGFEAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALAT 165
             G+   ++ E +            ++ I GMTCAAC N +E  L  + GV  A V  A 
Sbjct: 66  KLGYH--VVTEKA------------EFDIEGMTCAACANRIEKRLNKIEGVANAPVNFAL 111
Query: 166 SLGEVEYDPTVISKDDIANAIEDAGFE 192
               VEY+P   S  D+  A++  G++
Sbjct: 112 ETVTVEYNPKEASVSDLKEAVDKLGYK 138

>pdb|1P6T|A Chain A, Structure Characterization Of The Water Soluble Region Of P- Type Atpase Copa From Bacillus Subtilis Length = 151

Iteration: 1
 Score = 82.4 bits (202), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 14/147 (9%)
Query: 46  RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIE 105
           + I + V+GMTCAAC+  +E  L  + GV  A+V L     +V++DP       I+  IE
Sbjct: 6   KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE 65
Query: 106 DAGFEAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALAT 165
             G+   ++ E +            ++ I GMTCAAC N +E  L  + GV  A V  A 
Sbjct: 66  KLGYH--VVTEKA------------EFDIEGMTCAACANRIEKRLNKIEGVANAPVNFAL 111
Query: 166 SLGEVEYDPTVISKDDIANAIEDAGFE 192
               VEY+P   S  D+  A++  G++
Sbjct: 112 ETVTVEYNPKEASVSDLKEAVDKLGYK 138

>pdb|2KOY|A Chain A, Structure Of The E1064a Mutant Of The N-Domain Of Wilson Disease Associated Protein Length = 141

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 66/137 (48%), Gaps = 30/137 (21%)
Query: 678 EFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFS 737
           + L +V +A ASSEHPL  AV +Y                    KE  G+  L   +DF 
Sbjct: 24  KVLAVVGTAAASSEHPLGVAVTKYC-------------------KEELGTETLGYCTDFQ 64
Query: 738 ALPGRGIQCFISGKQ-----------VLVGNRKLLNESGITIPDHVESFVVELEESARTG 786
           A+PG GI C +S  +           VL+GNR+ L  +G+TI   V   + + E   +T 
Sbjct: 65  AVPGCGIGCKVSNVEGILAAVPQTFSVLIGNREWLRRNGLTISSDVSDAMTDHEMKGQTA 124
Query: 787 ILVAYDDNLIGVMGIAD 803
           ILVA D  L G++ IAD
Sbjct: 125 ILVAIDGVLCGMIAIAD 141

>pdb|1AW0|A Chain A, Fourth Metal-Binding Domain Of The Menkes Copper- Transporting Atpase, Nmr, 20 Structures Length = 72

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 42/62 (67%)
Query: 134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
           I GMTC +CV S+EG++   PGVK   V+LA S G VEYDP + S + +  AIED GF+A
Sbjct: 9   IDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDA 68
Query: 194 SF 195
           + 
Sbjct: 69  TL 70

>pdb|2GGP|B Chain B, Solution Structure Of The Atx1-Cu(I)-Ccc2a Complex Length = 72

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 46  RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIE 105
           R + + V GMTC+AC+N++   L  LKGV K  ++L+ N+  V +D ++  D  IK  IE
Sbjct: 2   REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADS-IKEIIE 60
Query: 106 DAGFEAEILAES 117
           D GF+ EIL +S
Sbjct: 61  DCGFDCEILRDS 72

>pdb|2GGP|B Chain B, Solution Structure Of The Atx1-Cu(I)-Ccc2a Complex Length = 72

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
           + GMTC+AC N++   LR L GV +  ++L T+  +V YD  V + D I   IED GF+ 
Sbjct: 8   VHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEV-TADSIKEIIEDCGFDC 66
Query: 194 SFVQSS 199
             ++ S
Sbjct: 67  EILRDS 72

>pdb|1FVS|A Chain A, Solution Structure Of The Yeast Copper Transporter Domain Ccc2a In The Apo And Cu(I) Load States Length = 72

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 46  RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIE 105
           R + + V GMTC+AC+N++   L  LKGV K  ++L+ N+  V +D ++  D  IK  IE
Sbjct: 2   REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADS-IKEIIE 60
Query: 106 DAGFEAEILAES 117
           D GF+ EIL +S
Sbjct: 61  DCGFDCEILRDS 72

>pdb|1FVS|A Chain A, Solution Structure Of The Yeast Copper Transporter Domain Ccc2a In The Apo And Cu(I) Load States Length = 72

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
           + GMTC+AC N++   LR L GV +  ++L T+  +V YD  V + D I   IED GF+ 
Sbjct: 8   VHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEV-TADSIKEIIEDCGFDC 66
Query: 194 SFVQSS 199
             ++ S
Sbjct: 67  EILRDS 72

>pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 135/318 (42%), Gaps = 45/318 (14%)
Query: 413 YLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTK 472
           +++    G   D +KK + L      +V++D   K     EI+A  +  GD L+V  GT 
Sbjct: 159 FVQEFQAGSIVDELKKTLALKA----VVLRDGTLK-----EIEAPEVVPGDILQVEEGTI 209
Query: 473 LPADGIVVWGTSY--VNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVL 530
           +PADG +V   ++  V++S +TGE++ V K     V   +    G   +  T  G +  +
Sbjct: 210 IPADGRIVTDDAFLQVDQSALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFV 269
Query: 531 SQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPEN 590
            +  +LV  A        +  + + +I + +V+    FT L  +V+    + P       
Sbjct: 270 GRAAALVNAASGGSGHFTEVLNGIGTILLILVI----FTLLIVWVSSFYRSNP------- 318
Query: 591 GTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYV 650
               V  L F++++ +I  P  L     T + V     A    +++   A+E    ++ +
Sbjct: 319 ---IVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEIL 375
Query: 651 IFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSE-----------------HP 693
             DKTGTLT+ + ++        +D  E L L A   AS +                 +P
Sbjct: 376 CSDKTGTLTKNKLSLHDPYTVAGVDP-EDLMLTACLAASRKKKGIDAIDKAFLKSLKYYP 434
Query: 694 LAKAVVEYAR--HFHFFD 709
            AK+V+   +   FH FD
Sbjct: 435 RAKSVLSKYKVLQFHPFD 452

>pdb|1YJU|A Chain A, Solution Structure Of The Apo Form Of The Sixth Soluble Domain Of Menkes Protein Length = 75

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/74 (40%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 41  IGDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDI 100
           +GDG+  +++ V GMTCA+C + +E +L   +G+   SVAL  NKA + +DP+++   DI
Sbjct: 1   MGDGV--LELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDI 58
Query: 101 KNAIEDAGFEAEIL 114
            + IE  GFEA ++
Sbjct: 59  IHTIESLGFEASLV 72

>pdb|1YJU|A Chain A, Solution Structure Of The Apo Form Of The Sixth Soluble Domain Of Menkes Protein Length = 75

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 126 GTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANA 185
           G  V +  + GMTCA+CV+ +E  L    G+    VALAT+   ++YDP +I   DI + 
Sbjct: 2   GDGVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHT 61
Query: 186 IEDAGFEASFVQ 197
           IE  GFEAS V+
Sbjct: 62  IESLGFEASLVK 73

>pdb|1YJR|A Chain A, Solution Structure Of The Apo Form Of The Sixth Soluble Domain A69p Mutant Of Menkes Protein Length = 75

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 41  IGDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDI 100
           +GDG+  +++ V GMTCA+C + +E +L   +G+   SVAL  NKA + +DP+++   DI
Sbjct: 1   MGDGV--LELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDI 58
Query: 101 KNAIEDAGFEAEIL 114
            + IE  GFE  ++
Sbjct: 59  IHTIESLGFEPSLV 72

>pdb|1YJR|A Chain A, Solution Structure Of The Apo Form Of The Sixth Soluble Domain A69p Mutant Of Menkes Protein Length = 75

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/72 (41%), Positives = 42/72 (58%)
Query: 126 GTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANA 185
           G  V +  + GMTCA+CV+ +E  L    G+    VALAT+   ++YDP +I   DI + 
Sbjct: 2   GDGVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHT 61
Query: 186 IEDAGFEASFVQ 197
           IE  GFE S V+
Sbjct: 62  IESLGFEPSLVK 73

>pdb|2ARF|A Chain A, Solution Structure Of The Wilson Atpase N-Domain In The Presence Of Atp Length = 165

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 67/161 (41%), Gaps = 54/161 (33%)
Query: 678 EFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFS 737
           + L +V +AEASSEHPL  AV +Y                    KE  G+  L   +DF 
Sbjct: 24  KVLAVVGTAEASSEHPLGVAVTKYC-------------------KEELGTETLGYCTDFQ 64
Query: 738 ALPGRGIQCFISGKQ-----------------------------------VLVGNRKLLN 762
           A+PG GI C +S  +                                   VL+GNR+ L 
Sbjct: 65  AVPGCGIGCKVSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLR 124
Query: 763 ESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIAD 803
            +G+TI   V   + + E   +T ILVA D  L G++ IAD
Sbjct: 125 RNGLTISSDVSDAMTDHEMKGQTAILVAIDGVLCGMIAIAD 165

>pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 121/277 (43%), Gaps = 37/277 (13%)
Query: 401 SAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQ 460
           SA++I    F  Y E     K+S  ++    + P  AL++         E+  I+A  + 
Sbjct: 112 SAVVIITGCFSYYQE----AKSSKIMESFKNMVPQQALVIRNG------EKMSINAEEVV 161
Query: 461 SGDTLKVLPGTKLPAD-GIVVWGTSYVNESMVTGEAVPVLKEIN----SPVIGGTINLHG 515
            GD ++V  G ++PAD  I+      V+ S +TGE+ P  +  +    +P+    I    
Sbjct: 162 VGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSPDFTNENPLETRNIAFFS 221
Query: 516 VLHIQATK------VGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFT 569
              ++ T        G   V+ +I +L    +  + PI    +     F+ I+  +A+F 
Sbjct: 222 TNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPIAAEIEH----FIHIITGVAVFL 277
Query: 570 WLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVG- 628
            + +++  ++  Y   WL         A++F I ++V   P  L LAT T  +  T    
Sbjct: 278 GVSFFILSLILEY--TWLE--------AVIFLIGIIVANVPEGL-LATVTVCLTLTAKRM 326
Query: 629 ANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATV 665
           A    L+K  +A+E       +  DKTGTLTQ R TV
Sbjct: 327 ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTV 363

>pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 117/269 (43%), Gaps = 37/269 (13%)
Query: 410 FGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLP 469
           FG Y E     K+++ I     L P  A  V++D      ++ +I+A  +  GD +++  
Sbjct: 156 FGYYQEF----KSTNIIASFKNLVPQQAT-VIRDG-----DKFQINADQLVVGDLVEMKG 205
Query: 470 GTKLPADGIVVWGTSY-VNESMVTGEAVPVLK----------EINSPVIGGTINLHGVLH 518
           G ++PAD  ++      V+ S +TGE+ P  +          E  +     T+ L G   
Sbjct: 206 GDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQ 265
Query: 519 IQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGV 578
                 G   ++ +I SL    +  K PI    +     FV I+  LA+     +++  +
Sbjct: 266 GLVVNTGDRTIIGRIASLASGVENEKTPIAIEIEH----FVDIIAGLAILFGATFFIVAM 321
Query: 579 LGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVG-ANNGVLIKG 637
              Y           F+ A++F +++VV   P  L LAT T  +  T    A+   ++K 
Sbjct: 322 CIGY----------TFLRAMVFFMAIVVAYVPEGL-LATVTVCLSLTAKRLASKNCVVKN 370
Query: 638 GDALERAQKIKYVIFDKTGTLTQGRATVT 666
            +A+E       +  DKTGTLTQ R TV+
Sbjct: 371 LEAVETLGSTSVICSDKTGTLTQNRMTVS 399

>pdb|2KMV|A Chain A, Solution Structure Of The Nucleotide Binding Domain Of The Human Menkes Protein In The Atp-Free Form Length = 185

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/199 (25%), Positives = 76/199 (38%), Gaps = 74/199 (37%)
Query: 660 QGRATVTTAKVFTKMDR---GEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPD 716
            G   V   KV T+ +R    + L +V +AE++SEHPL  A+ +Y +             
Sbjct: 5   HGTPVVNQVKVLTESNRISHHKILAIVGTAESNSEHPLGTAITKYCK------------- 51
Query: 717 GQSHSKESTGSGWLLDVSDFSALPGRG-----------------------------IQCF 747
            Q    E+ G+       DF  +PG G                             +Q  
Sbjct: 52  -QELDTETLGT-----CIDFQVVPGCGISCKVTNIEGLLHKNNWNIEDNNIKNASLVQID 105
Query: 748 ISGKQ-----------------------VLVGNRKLLNESGITIPDHVESFVVELEESAR 784
            S +Q                       VL+GNR+ +  +G+ I + V  F+ E E   R
Sbjct: 106 ASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGLVINNDVNDFMTEHERKGR 165
Query: 785 TGILVAYDDNLIGVMGIAD 803
           T +LVA DD L G++ IAD
Sbjct: 166 TAVLVAVDDELCGLIAIAD 184

>pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b Length = 263

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 32/141 (22%)
Query: 630 NNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTL--VASAE 687
           + G++IK  +  E+ ++I  +IFDKTGTLT G   VT          G+ L+L   AS E
Sbjct: 11  HKGMIIKNSNVYEKIKEIDTIIFDKTGTLTYGTPIVTQFI-------GDSLSLAYAASVE 63
Query: 688 ASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCF 747
           A S HP+AKA+V+YA+             G            +L+V DF  + G G++  
Sbjct: 64  ALSSHPIAKAIVKYAKE-----------QGVK----------ILEVKDFKEISGIGVRGK 102
Query: 748 ISGKQVLVGNRKLLNESGITI 768
           IS K + V  +K  N + I +
Sbjct: 103 ISDKIIEV--KKAENNNDIAV 121

>pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 32/141 (22%)
Query: 630 NNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTL--VASAE 687
           + G++IK  +  E+ ++I  +IF+KTGTLT G   VT          G+ L+L   AS E
Sbjct: 11  HKGMIIKNSNVYEKIKEIDTIIFNKTGTLTYGTPIVTQFI-------GDSLSLAYAASVE 63
Query: 688 ASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCF 747
           A S HP+AKA+V+YA+             G            +L+V DF  + G G++  
Sbjct: 64  ALSSHPIAKAIVKYAKE-----------QGVK----------ILEVKDFKEISGIGVRGK 102
Query: 748 ISGKQVLVGNRKLLNESGITI 768
           IS K + V  +K  N + I +
Sbjct: 103 ISDKIIEV--KKAENNNDIAV 121

>pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 32/141 (22%)
Query: 630 NNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTL--VASAE 687
           + G++IK  +  E+ ++I  +IF+KTGTLT G   VT          G+ L+L   AS E
Sbjct: 11  HKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI-------GDSLSLAYAASVE 63
Query: 688 ASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCF 747
           A S HP+AKA+V+YA+             G            +L+V DF  + G G++  
Sbjct: 64  ALSSHPIAKAIVKYAKE-----------QGVK----------ILEVKDFKEISGIGVRGK 102
Query: 748 ISGKQVLVGNRKLLNESGITI 768
           IS K + V  +K  N + I +
Sbjct: 103 ISDKIIEV--KKAENNNDIAV 121

>pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 120/277 (43%), Gaps = 37/277 (13%)
Query: 401 SAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQ 460
           SA++I    F  Y E     K+S  ++    + P  AL++         E+  I+A  + 
Sbjct: 106 SAVVIITGCFSYYQE----AKSSKIMESFKNMVPQQALVIRNG------EKMSINAEEVV 155
Query: 461 SGDTLKVLPGTKLPAD-GIVVWGTSYVNESMVTGEAVPVLKEIN----SPVIGGTINLHG 515
            GD ++V  G ++PAD  I+      V+ S +TGE+ P  +  +    +P+    I    
Sbjct: 156 VGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSPDFTNENPLETRNIAFFS 215
Query: 516 VLHIQATK------VGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFT 569
              ++ T        G   V+ +I +L    +  + PI    +     F+ I+  +A+F 
Sbjct: 216 TNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPIAAEIEH----FIHIITGVAVFL 271
Query: 570 WLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVG- 628
            + +++  ++  Y   WL         A++F I ++V   P  L LAT T  +  T    
Sbjct: 272 GVSFFILSLILEY--TWLE--------AVIFLIGIIVANVPEGL-LATVTVCLTLTAKRM 320
Query: 629 ANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATV 665
           A    L+K  +A+E       +   KTGTLTQ R TV
Sbjct: 321 ARKNCLVKNLEAVETLGSTSTICSXKTGTLTQNRMTV 357

>pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 131/304 (43%), Gaps = 40/304 (13%)
Query: 381 VGALLYGVVTGFWSPTYFETS-------AMLITFVLFGKYLEILAKGKTSDAIKKLVELA 433
           +GA+L  +  G  + T  E +        +L T V+         + K+S  +     + 
Sbjct: 111 IGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMV 170
Query: 434 PATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPAD-GIVVWGTSYVNESMVT 492
           P  AL V++D      E+  I+A  + +GD ++V  G ++PAD  I+      V+ S +T
Sbjct: 171 PQQAL-VIRDG-----EKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVDNSSLT 224
Query: 493 GEAVPVLK--EINS--PVIGGTINLHGVLHIQATK------VGSDAVLSQIISLVETAQM 542
           GE+ P  +  E +S  P+    I       ++ T        G   V+ +I +L    ++
Sbjct: 225 GESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEV 284
Query: 543 SKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSI 602
            + PI    +    I   +    A+F  + +++  ++  Y   WL         A++F I
Sbjct: 285 GRTPIAIEIEHFIHIITGV----AVFLGVSFFILSLILGY--SWLE--------AVIFLI 330
Query: 603 SVVVIACPCALGLATPTAVMVATGVG-ANNGVLIKGGDALERAQKIKYVIFDKTGTLTQG 661
            ++V   P  L LAT T  +  T    A    L+K  +A+E       +  DKTGTLTQ 
Sbjct: 331 GIIVANVPEGL-LATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQN 389
Query: 662 RATV 665
           R TV
Sbjct: 390 RMTV 393

>pdb|1Q8L|A Chain A, Second Metal Binding Domain Of The Menkes Atpase Length = 84

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 42/64 (65%)
Query: 48  IQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDA 107
           +++ V GMTC +C++++EG +  L+GV +  V+L   +A +V+ P L+  E++K  IE  
Sbjct: 11  LKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAM 70
Query: 108 GFEA 111
           GF A
Sbjct: 71  GFPA 74

>pdb|1Q8L|A Chain A, Second Metal Binding Domain Of The Menkes Atpase Length = 84

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 126 GTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANA 185
           G +V +  + GMTC +C +++EG +  L GV+R  V+L      + Y P +IS +++   
Sbjct: 7   GEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQ 66
Query: 186 IEDAGFEA 193
           IE  GF A
Sbjct: 67  IEAMGFPA 74

>pdb|1S6O|A Chain A, Solution Structure And Backbone Dynamics Of The Apo-Form Of The Second Metal-Binding Domain Of The Menkes Protein Atp7a Length = 76

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 42/64 (65%)
Query: 48  IQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDA 107
           +++ V GMTC +C++++EG +  L+GV +  V+L   +A +V+ P L+  E++K  IE  
Sbjct: 5   LKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAM 64
Query: 108 GFEA 111
           GF A
Sbjct: 65  GFPA 68

>pdb|1S6O|A Chain A, Solution Structure And Backbone Dynamics Of The Apo-Form Of The Second Metal-Binding Domain Of The Menkes Protein Atp7a Length = 76

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 126 GTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANA 185
           G +V +  + GMTC +C +++EG +  L GV+R  V+L      + Y P +IS +++   
Sbjct: 1   GEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQ 60
Query: 186 IEDAGFEA 193
           IE  GF A
Sbjct: 61  IEAMGFPA 68

>pdb|1KVI|A Chain A, Solution Structure Of The Reduced Form Of The First Heavy Metal Binding Motif Of The Menkes Protein Length = 79

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 41/70 (58%)
Query: 44  GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNA 103
           G+  + + V GMTC +C  ++E  +  + GV    V+L +  A +++DP L   + ++ A
Sbjct: 6   GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEA 65
Query: 104 IEDAGFEAEI 113
           I+D GF+A I
Sbjct: 66  IDDMGFDAVI 75

>pdb|2K1R|A Chain A, The Solution Nmr Structure Of The Complex Between Mnk1 And Hah1 Mediated By Cu(I) Length = 73

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 41/70 (58%)
Query: 44  GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNA 103
           G+  + + V GMTC +C  ++E  +  + GV    V+L +  A +++DP L   + ++ A
Sbjct: 2   GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEA 61
Query: 104 IEDAGFEAEI 113
           I+D GF+A I
Sbjct: 62  IDDMGFDAVI 71

>pdb|2LDI|A Chain A, Nmr Solution Structure Of Ziaan Sub Mutant Length = 71

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 45  MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAI 104
           ++  Q+ V GM CAAC++S+E AL  LKGVA+ASV +   +  V +DP  V +  I+  I
Sbjct: 2   LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERI 61
Query: 105 EDAGF 109
              G+
Sbjct: 62  AALGY 66

>pdb|2LDI|A Chain A, Nmr Solution Structure Of Ziaan Sub Mutant Length = 71

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/61 (42%), Positives = 33/61 (54%)
Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
           Q  +GGM CAAC +S+E  L  L GV  A V +AT    V YDP  +S+  I   I   G
Sbjct: 6   QMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALG 65
Query: 191 F 191
           +
Sbjct: 66  Y 66

>pdb|1Y3K|A Chain A, Solution Structure Of The Apo Form Of The Fifth Domain Of Menkes Protein Length = 77

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
           + GMTCA+CV ++E  LR   G+   +VAL     EV Y+P VI    IA  I + GF A
Sbjct: 9   VTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGA 68
Query: 194 SFVQS 198
           + +++
Sbjct: 69  TVIEN 73

>pdb|2OFH|X Chain X, Solution Structure Of The N-Terminal Domain Of The Zinc(Ii) Atpase Ziaa In Its Apo Form Length = 111

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 45  MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAI 104
           ++  Q+ V GM C +C   +EG+L  LKGVA+ASV +   +  V +DP  V +  I+  I
Sbjct: 7   LKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERI 66
Query: 105 EDAGFEAEILAESSTS 120
              G+    LAE  +S
Sbjct: 67  AALGY---TLAEPKSS 79

>pdb|2OFH|X Chain X, Solution Structure Of The N-Terminal Domain Of The Zinc(Ii) Atpase Ziaa In Its Apo Form Length = 111

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 35/69 (50%)
Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
           Q  +GGM C +C   +EG L  L GV  A V +AT    V YDP  +S+  I   I   G
Sbjct: 11  QMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALG 70
Query: 191 FEASFVQSS 199
           +  +  +SS
Sbjct: 71  YTLAEPKSS 79

>pdb|2OFG|X Chain X, Solution Structure Of The N-Terminal Domain Of The Zinc(Ii) Atpase Ziaa In Its Apo Form Length = 111

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 45  MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAI 104
           ++  Q+ V GM C +C   +EG+L  LKGVA+ASV +   +  V +DP  V +  I+  I
Sbjct: 2   LKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERI 61
Query: 105 EDAGFEAEILAESSTS 120
              G+    LAE  +S
Sbjct: 62  AALGY---TLAEPKSS 74

>pdb|2OFG|X Chain X, Solution Structure Of The N-Terminal Domain Of The Zinc(Ii) Atpase Ziaa In Its Apo Form Length = 111

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 35/69 (50%)
Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
           Q  +GGM C +C   +EG L  L GV  A V +AT    V YDP  +S+  I   I   G
Sbjct: 6   QMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALG 65
Query: 191 FEASFVQSS 199
           +  +  +SS
Sbjct: 66  YTLAEPKSS 74

>pdb|3CJK|B Chain B, Crystal Structure Of The Adduct Hah1-Cd(Ii)-Mnk1 Length = 75

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 48  IQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDA 107
           + + V GMTC +C  ++E  +  + GV    V+L +  A +++DP L   + ++ AI+D 
Sbjct: 4   VTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDM 63
Query: 108 GFEAEI 113
           GF+A I
Sbjct: 64  GFDAVI 69

>pdb|1P8G|A Chain A, The Solution Structure Of Apo Copz From Bacillus Subtilis Length = 73

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 38/66 (57%)
Query: 45  MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAI 104
           M +  + V GM+C  C  +VE ++  L GV+   V L   K DV FD D V  +DI +AI
Sbjct: 1   MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAI 60
Query: 105 EDAGFE 110
           ED G++
Sbjct: 61  EDQGYD 66

>pdb|1P8G|A Chain A, The Solution Structure Of Apo Copz From Bacillus Subtilis Length = 73

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
           + GM+C  CV +VE  +  L GV    V L     +V +D   +S  DIA+AIED G++ 
Sbjct: 8   VEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV 67
Query: 194 SFVQ 197
           + ++
Sbjct: 68  AKIE 71

>pdb|2QIF|A Chain A, Crystal Structure Of A Metallochaperone With A Tetranuclear Cu(I) Cluster Length = 69

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 38/66 (57%)
Query: 45  MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAI 104
           M +  + V GM+C  C  +VE ++  L GV+   V L   K DV FD D V  +DI +AI
Sbjct: 1   MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAI 60
Query: 105 EDAGFE 110
           ED G++
Sbjct: 61  EDQGYD 66

>pdb|2QIF|A Chain A, Crystal Structure Of A Metallochaperone With A Tetranuclear Cu(I) Cluster Length = 69

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFE 192
           + GM+C  CV +VE  +  L GV    V L     +V +D   +S  DIA+AIED G++
Sbjct: 8   VEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYD 66

>pdb|2VOY|J Chain J, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 118

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 27/130 (20%)
Query: 675 DRGEFLTLVASAEASSEHPLAKAVVEYA-RHFHFFDDPSLNPDGQSHSKESTGSGWLLDV 733
           D  E L L A AE  SEHP+A+A+V+ A  H     +P                      
Sbjct: 14  DERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPE--------------------- 52
Query: 734 SDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDD 793
                + G G+        +LVGN++L  + G+ + + VE  + +LE  A+T ++VA + 
Sbjct: 53  -KVEVIAGEGVVA----DGILVGNKRLXEDFGVAVSNEVELALEKLEREAKTAVIVARNG 107
Query: 794 NLIGVMGIAD 803
            + G++ ++D
Sbjct: 108 RVEGIIAVSD 117

>pdb|1KQK|A Chain A, Solution Structure Of The N-Terminal Domain Of A Potential Copper-Translocating P-Type Atpase From Bacillus Subtilis In The Cu(I)loaded State Length = 80

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 130 GQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDA 189
            ++ I GMTCAAC N +E  L  + GV  A V  A     VEY+P   S  D+  A++  
Sbjct: 5   AEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKL 64
Query: 190 GFE 192
           G++
Sbjct: 65  GYK 67

>pdb|2VOY|A Chain A, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 80

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 130 GQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDA 189
            ++ I GMTCAAC N +E  L  + GV  A V  A     VEY+P   S  D+  A++  
Sbjct: 5   AEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKL 64
Query: 190 GFE 192
           G++
Sbjct: 65  GYK 67

>pdb|2L3M|A Chain A, Solution Structure Of The Putative Copper-Ion-Binding Protein From Bacillus Anthracis Str. Ames Length = 71

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFE 192
           + GM+C  CVN++E  ++ L GV++  V LA    EV  D +V++  DI   IED G++
Sbjct: 11  VEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYD 69

>pdb|1OPZ|A Chain A, A Core Mutation Affecting The Folding Properties Of A Soluble Domain Of The Atpase Protein Copa From Bacillus Subtilis Length = 76

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 46  RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIE 105
           + I + V+GMTCAAC+  +E  L  + GV  A+V L     +V++DP       I+  IE
Sbjct: 6   KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE 65
Query: 106 DAGFEAEI 113
             G+   I
Sbjct: 66  KLGYHVVI 73

>pdb|1OPZ|A Chain A, A Core Mutation Affecting The Folding Properties Of A Soluble Domain Of The Atpase Protein Copa From Bacillus Subtilis Length = 76

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 30/58 (51%)
Query: 134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGF 191
           + GMTCAAC   +E  L+ +PGV  A V LAT    V YDP       I   IE  G+
Sbjct: 12  VSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGY 69

>pdb|1AFI|A Chain A, Structure Of The Reduced Form Of Merp, The Periplasmic Protein From The Bacterial Mercury Detoxification System, Nmr, 20 Structures Length = 72

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 44  GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNA 103
             + + + V GMTCAAC  +V+ AL  ++GV+K  V   + +A V FD      + +  A
Sbjct: 1   ATQTVTLAVPGMTCAACPITVKKALSKVEGVSKVDVGFEKREAVVTFDDTKASVQKLTKA 60
Query: 104 IEDAGFEAEI 113
             DAG+ + +
Sbjct: 61  TADAGYPSSV 70

>pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 129/315 (40%), Gaps = 41/315 (13%)
Query: 389 VTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKC 448
           +T F  P  F    +LI   + G + E  A+    +AI+ L E  P    +   D+  K 
Sbjct: 86  ITAFVEP--FVILLILIANAIVGVWQERNAE----NAIEALKEYEPEMGKVYRADR--KS 137
Query: 449 IEEREIDALLIQSGDTLKVLPGTKLPADGIVVW---GTSYVNESMVTGEAVPVLKEI--- 502
           ++   I A  I  GD ++V  G K+PAD  ++     T  V++S++TGE+V V+K     
Sbjct: 138 VQR--IKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPV 195
Query: 503 -----------NSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFA 551
                      N    G  I     L I AT  G    + +I   +   +  K P+Q+  
Sbjct: 196 PDPRAVNQDKKNMLFSGTNIAAGKALGIVAT-TGVSTEIGKIRDQMAATEQDKTPLQQKL 254
Query: 552 DFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIAC-- 609
           D        ++  + +  WL       +G + +   P +G  ++   ++   + V     
Sbjct: 255 DEFGEQLSKVISLICVAVWLI-----NIGHFND---PVHGGSWIRGAIYYFKIAVALAVA 306
Query: 610 --PCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTT 667
             P  L     T + + T   A    +++   ++E       +  DKTGTLT  + +V  
Sbjct: 307 AIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCK 366
Query: 668 AKVFTKMDRGEFLTL 682
             +  K+D G+F +L
Sbjct: 367 MFIIDKVD-GDFCSL 380

>pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 129/315 (40%), Gaps = 41/315 (13%)
Query: 389 VTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKC 448
           +T F  P  F    +LI   + G + E  A+    +AI+ L E  P    +   D+  K 
Sbjct: 85  ITAFVEP--FVILLILIANAIVGVWQERNAE----NAIEALKEYEPEMGKVYRADR--KS 136
Query: 449 IEEREIDALLIQSGDTLKVLPGTKLPADGIVVW---GTSYVNESMVTGEAVPVLKEI--- 502
           ++   I A  I  GD ++V  G K+PAD  ++     T  V++S++TGE+V V+K     
Sbjct: 137 VQR--IKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPV 194
Query: 503 -----------NSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFA 551
                      N    G  I     L I AT  G    + +I   +   +  K P+Q+  
Sbjct: 195 PDPRAVNQDKKNMLFSGTNIAAGKALGIVAT-TGVSTEIGKIRDQMAATEQDKTPLQQKL 253
Query: 552 DFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIAC-- 609
           D        ++  + +  WL       +G + +   P +G  ++   ++   + V     
Sbjct: 254 DEFGEQLSKVISLICVAVWLI-----NIGHFND---PVHGGSWIRGAIYYFKIAVALAVA 305
Query: 610 --PCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTT 667
             P  L     T + + T   A    +++   ++E       +  DKTGTLT  + +V  
Sbjct: 306 AIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCK 365
Query: 668 AKVFTKMDRGEFLTL 682
             +  K+D G+F +L
Sbjct: 366 MFIIDKVD-GDFCSL 379

>pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 89/424 (20%), Positives = 166/424 (39%), Gaps = 53/424 (12%)
Query: 442 KDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSY-VNESMVTGEAVPVLK 500
           K KV +  +  E +A ++  GD + +  G  +PAD  ++ G    V++S +TGE++PV K
Sbjct: 131 KTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTK 190
Query: 501 EINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVP 560
                V  G+    G +       G      +   LV++       +  F   + +I   
Sbjct: 191 HPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ----VGHFQKVLTAIGNF 246
Query: 561 IVVTLALFTWLCWYVAGVLGAYPEQWLP-ENGTHFVFALMFSISVVVIACPCALGLATPT 619
            + ++A+       V  ++  YP Q     +G   +  L+             + +A PT
Sbjct: 247 CICSIAIG-----MVIEIIVMYPIQRRKYRDGIDNLLVLLIG----------GIPIAMPT 291
Query: 620 AVMVATGVGAN----NGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATV--TTAKVFTK 673
            + V   +G++     G + K   A+E    +  +  DKTGTLT  + +V     +VF K
Sbjct: 292 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCK 351
Query: 674 MDRGEFLTLVASAEASSEHPLA------------KAVVEYARHFHFFDDPSLNP-DGQSH 720
               + + L A+  +  E+  A            K      R  HF      NP D ++ 
Sbjct: 352 GVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFL---PFNPVDKRTA 408
Query: 721 SKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELE 780
                GSG    VS     P + ++   +   +   ++K+L+         + S  V  +
Sbjct: 409 LTYIDGSGNWHRVS--KGAPEQILELAKASNDL---SKKVLSIIDKYAERGLRSLAVARQ 463
Query: 781 ---ESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAV 837
              E  +      ++   +G++ + DP + ++A  +   L +GV   M+TGD        
Sbjct: 464 VVPEKTKESPGAPWE--FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKET 521
Query: 838 AREV 841
            R +
Sbjct: 522 GRRL 525

>pdb|1OSD|A Chain A, Crystal Structure Of Oxidized Merp From Ralstonia Metallidurans Ch34 Length = 72

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 37/70 (52%)
Query: 44  GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNA 103
             + + + V GMTC+AC  +V+ A+  ++GV+K  V     +A V FD      + +  A
Sbjct: 1   ATQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKA 60
Query: 104 IEDAGFEAEI 113
             DAG+ + +
Sbjct: 61  TADAGYPSSV 70

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	845
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	0.0
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	6e-18
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	3e-17
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	0.0
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	0.0
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	8e-73
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	3e-63
2kij_A	124	Copper-transporting ATPase 1; actuator, menkes dis	1e-59
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	3e-59
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	2e-55
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	1e-29
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	2e-22
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	5e-50
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	7e-29
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	7e-49
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	7e-24
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	8e-24
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	2e-04
2hc8_A	113	PACS, cation-transporting ATPase, P-type; copper,	5e-43
2arf_A	165	Wilson disease ATPase; P-type ATPase,ATP7B, copper	1e-31
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	5e-28
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	1e-24
2kmv_A	185	Copper-transporting ATPase 1; menkes, nucleotide b	2e-27
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	9e-27
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	4e-24
2kkh_A	95	Putative heavy metal transporter; zinc transport,	2e-26
2kkh_A	95	Putative heavy metal transporter; zinc transport,	6e-25
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	2e-26
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	3e-24
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	3e-26
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	5e-26
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	7e-26
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	7e-26
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	2e-24
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	1e-25
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	8e-25
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	2e-25
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	3e-25
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	2e-25
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	1e-24
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	6e-25
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	2e-23
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	7e-25
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	2e-24
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	9e-25
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	8e-24
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	1e-24
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	1e-23
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	1e-24
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	2e-24
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	1e-23
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	4e-22
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	1e-23
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	5e-23
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	1e-23
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	3e-22
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	4e-22
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	5e-22
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	4e-19
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	1e-18
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	1e-18
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	8e-18
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	1e-18
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	8e-18
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	2e-18
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	8e-17
1svj_A	156	Potassium-transporting ATPase B chain; alpha-beta	2e-18
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	1e-16
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	1e-16
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	2e-16
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	2e-09
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	8e-16
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	2e-11
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	2e-14
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	9e-14
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	1e-13
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	4e-07
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	1e-13
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	8e-07
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	3e-13
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	5e-12
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	2e-12
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	2e-11
2kyz_A	67	Heavy metal binding protein; structural genomics,	5e-11
2kyz_A	67	Heavy metal binding protein; structural genomics,	2e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	6e-09
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	3e-08
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	1e-08
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	2e-06
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	2e-08
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	7e-08
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	3e-06
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	2e-05
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	1e-05

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723

 Score =  629 bits (1625), Expect = 0.0
 Identities = 216/641 (33%), Positives = 332/641 (51%), Gaps = 73/641 (11%)

Query: 203 KILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGI-- 260
           +  ++VTG+ C +    +E  + + +GV + R +  +    + FD + +   ++   I  
Sbjct: 3   ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIED 62

Query: 261 AGRSNGKFQIRVMNPFARMTSRDSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYAL 320
            G          +       S + E  S M R    + F  + + F+     H       
Sbjct: 63  LGYG--------VVDEQAAVSAEVEHLSRMKRKLYVAAFAGVLLLFL----AHFI----- 105

Query: 321 LLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYS 380
                      D++   +     F  G   + AA  ALR  + NMDV+ ++G  AA+  S
Sbjct: 106 ------SLPYEDFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFLAS 159

Query: 381 VGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLV 440
           V +    +   +   +++ETS +L+ F+L G+ LE  AK +T +AIKKLV L   TA+ V
Sbjct: 160 VLSTAGVLPREY---SFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAV-V 215

Query: 441 VKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLK 500
           ++D      +E  +    +  GD + V PG K+P DG+VV G SYV+ESM++GE VPVLK
Sbjct: 216 IRDG-----KEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLK 270

Query: 501 EINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVP 560
                V G TIN  GVL I+AT+VG + +L+QI+ LVE A  SK PIQ+ AD V + F+P
Sbjct: 271 SKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIP 330

Query: 561 IVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTA 620
            V+ +A+  ++ WY                    +FA    I+V+V+ACPCA GLATPTA
Sbjct: 331 TVLLVAISAFIYWYFIA-------------HAPLLFAFTTLIAVLVVACPCAFGLATPTA 377

Query: 621 VMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFL 680
           + V  G GA  G+LIK  DALE A+K+  VIFDKTGTLT+G+  VT        D  E L
Sbjct: 378 LTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLN-GDERELL 436

Query: 681 TLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALP 740
            L A AE  SEHP+A+A+V+ A                    E      L +      + 
Sbjct: 437 RLAAIAERRSEHPIAEAIVKKA-------------------LEHGIE--LGEPEKVEVIA 475

Query: 741 GRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMG 800
           G G+        +LVGN++L+ + G+ + + VE  + +LE  A+T ++VA +  + G++ 
Sbjct: 476 GEGVV----ADGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIA 531

Query: 801 IADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREV 841
           ++D +K  A   V+ L +MG++  M+TGDNWR+A A++RE+
Sbjct: 532 VSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL 572

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723

 Score = 87.6 bits (218), Expect = 6e-18
 Identities = 24/73 (32%), Positives = 35/73 (47%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
              + GMTCA CV S+E  +  L GV+   V LAT    + +D   I  + I   IED G
Sbjct: 5   TVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLG 64

Query: 191 FEASFVQSSGQDK 203
           +     Q++   +
Sbjct: 65  YGVVDEQAAVSAE 77

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723

 Score = 85.6 bits (213), Expect = 3e-17
 Identities = 27/72 (37%), Positives = 36/72 (50%)

Query: 48  IQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDA 107
             V VTGMTCA C  S+E A+  L+GV +  V L    A + FD   +  E IK  IED 
Sbjct: 4   RTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDL 63

Query: 108 GFEAEILAESST 119
           G+       + +
Sbjct: 64  GYGVVDEQAAVS 75

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736

 Score =  622 bits (1606), Expect = 0.0
 Identities = 193/572 (33%), Positives = 295/572 (51%), Gaps = 55/572 (9%)

Query: 277 ARMTSRDSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNW 336
             ++   S E  +M R F  +L L+IPV  + +    +    +             W+  
Sbjct: 68  VTVSEVVSPEYLDMRRRFWIALMLTIPVVILEMGGHGLKHFISGNGSS--------WIQL 119

Query: 337 ALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLY-------GVV 389
            L + V    G  F+    ++L+ G  NM  L+A+G   A+ YS+ A+L+          
Sbjct: 120 LLATPVVLWGGWPFFKRGWQSLKTGQLNMFTLIAMGIGVAWIYSMVAVLWPGVFPHAFRS 179

Query: 390 TGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCI 449
                  YFE +A++ T VL G+ LE+ A+ +T  AI+ L++L P +A  + +D      
Sbjct: 180 QEGVVAVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDG----- 234

Query: 450 EEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGG 509
            E E+    +  GD L+V PG K+P DG V  G S+V+ESMVTGE +PV KE ++ VIG 
Sbjct: 235 SEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSFVDESMVTGEPIPVAKEASAKVIGA 294

Query: 510 TINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFT 569
           TIN  G   ++A  VGSD +L++I+ +V  AQ S+APIQ+ AD V+  FVP V+ +A+ +
Sbjct: 295 TINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLS 354

Query: 570 WLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGA 629
           ++ W + G          P+      + L+ ++SV++IACPCALGLATP ++MV  G GA
Sbjct: 355 FIVWALLG----------PQPA--LSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGA 402

Query: 630 NNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEAS 689
            +GVLIK  +ALER +K+  ++ DKTGTLT+G   +T   V         L L A+ E  
Sbjct: 403 QSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRI-VTDDFVEDNALALAAALEHQ 461

Query: 690 SEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFIS 749
           SEHPLA A+V  A+                  K  +    L  V  F A  G+G+   + 
Sbjct: 462 SEHPLANAIVHAAK-----------------EKGLS----LGSVEAFEAPTGKGVVGQVD 500

Query: 750 GKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREA 809
           G  V +GN +L+ E G      +     EL     + + +A D   + ++ + DP+K   
Sbjct: 501 GHHVAIGNARLMQEHGGDN-APLFEKADELRGKGASVMFMAVDGKTVALLVVEDPIKSST 559

Query: 810 AVVVEGLLKMGVRPVMVTGDNWRTAHAVAREV 841
              +  L + G+  VM+TGD+ RTA AVA  +
Sbjct: 560 PETILELQQSGIEIVMLTGDSKRTAEAVAGTL 591

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645

 Score =  614 bits (1587), Expect = 0.0
 Identities = 202/557 (36%), Positives = 299/557 (53%), Gaps = 63/557 (11%)

Query: 285 EETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQF 344
           E  S M R    + F  + + F+     H                  D++   +     F
Sbjct: 1   EHLSRMKRKLYVAAFAGVLLLFL----AHFI-----------SLPYEDFVQLLIALPAIF 45

Query: 345 VIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAML 404
             G   + AA  ALR  + NMDV+ ++G  AA+  SV +    +   +   +++ETS +L
Sbjct: 46  YSGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFLASVLSTAGVLPREY---SFYETSVLL 102

Query: 405 ITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDT 464
           + F+L G+ LE  AK +T +AIKKLV L   TA+ V++D      +E  +    +  GD 
Sbjct: 103 LAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAV-VIRDG-----KEIAVPVEEVAVGDI 156

Query: 465 LKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKV 524
           + V PG K+P DG+VV G SYV+ESM++GE VPVLK     V G TIN  GVL I+AT+V
Sbjct: 157 VIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRV 216

Query: 525 GSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPE 584
           G + +L+QI+ LVE A  SK PIQ+ AD V + F+P V+ +A+  ++ WY          
Sbjct: 217 GGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA------- 269

Query: 585 QWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERA 644
                     +FA    I+V+V+ACPCA GLATPTA+ V  G GA  G+LIK  DALE A
Sbjct: 270 ---HAP---LLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVA 323

Query: 645 QKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARH 704
           +K+  VIFDKTGTLT+G+  VT        D  E L L A AE  SEHP+A+A+V+ A  
Sbjct: 324 EKVTAVIFDKTGTLTKGKPEVTDLVPL-NGDERELLRLAAIAERRSEHPIAEAIVKKAL- 381

Query: 705 FHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNES 764
                                    L +      + G G+        +LVGN++L+ + 
Sbjct: 382 ----------------EHGIE----LGEPEKVEVIAGEGVV----ADGILVGNKRLMEDF 417

Query: 765 GITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPV 824
           G+ + + VE  + +LE  A+T ++VA +  + G++ ++D +K  A   V+ L +MG++  
Sbjct: 418 GVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVG 477

Query: 825 MVTGDNWRTAHAVAREV 841
           M+TGDNWR+A A++RE+
Sbjct: 478 MITGDNWRSAEAISREL 494

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287

 Score =  239 bits (612), Expect = 8e-73
 Identities = 77/217 (35%), Positives = 119/217 (54%), Gaps = 26/217 (11%)

Query: 625 TGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVA 684
           +  GA  G+LIK  DALE A+K+  VIFDKTGTLT+G+  VT        D  E L L A
Sbjct: 10  SRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLN-GDERELLRLAA 68

Query: 685 SAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGI 744
            AE  SEHP+A+A+V+ A                    E      L +      + G G+
Sbjct: 69  IAERRSEHPIAEAIVKKA-------------------LEHGIE--LGEPEKVEVIAGEGV 107

Query: 745 QCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADP 804
                   +LVGN++L+ + G+ + + VE  + +LE  A+T ++VA +  + G++ ++D 
Sbjct: 108 V----ADGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDT 163

Query: 805 VKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREV 841
           +K  A   V+ L +MG++  M+TGDNWR+A A++RE+
Sbjct: 164 LKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL 200

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280

 Score =  213 bits (545), Expect = 3e-63
 Identities = 66/207 (31%), Positives = 109/207 (52%), Gaps = 26/207 (12%)

Query: 635 IKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPL 694
           ++   A ERA+ ++ VIFDKTGTLT+GR  VT   V       E L + AS EA SEHP+
Sbjct: 1   MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVT-DIVGFNHSEDELLQIAASLEARSEHPI 59

Query: 695 AKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVL 754
           A A+VE A                           L +V +F A+PG+G++  ++G++ +
Sbjct: 60  AAAIVEEAE------KRGFG---------------LTEVEEFRAIPGKGVEGIVNGRRYM 98

Query: 755 VGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVE 814
           V +   + E GI   + VE    +L++  +T + +  +  + GV+ +AD ++ E+   + 
Sbjct: 99  VVSPGYIRELGIKTDESVE----KLKQQGKTVVFILKNGEVSGVIALADRIRPESREAIS 154

Query: 815 GLLKMGVRPVMVTGDNWRTAHAVAREV 841
            L  +G++ +M+TGDN   A  VA E+
Sbjct: 155 KLKAIGIKCMMLTGDNRFVAKWVAEEL 181

>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124

 Score =  197 bits (503), Expect = 1e-59
 Identities = 58/124 (46%), Positives = 78/124 (62%)

Query: 418 AKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADG 477
                S+A+ KL+ L    A +V  D     + E ++D  L+Q GD +KV+PG K P DG
Sbjct: 1   GSFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDG 60

Query: 478 IVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLV 537
            V+ G S V+ES++TGEA+PV K+  S VI G+IN +G L I AT VG+D  LSQI+ LV
Sbjct: 61  RVIEGHSMVDESLITGEAMPVAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLV 120

Query: 538 ETAQ 541
           E AQ
Sbjct: 121 EEAQ 124

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263

 Score =  201 bits (515), Expect = 3e-59
 Identities = 53/220 (24%), Positives = 88/220 (40%), Gaps = 49/220 (22%)

Query: 622 MVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLT 681
           +       + G++IK  +  E+ ++I  +IF+KTGTLT G   VT  +          L 
Sbjct: 3   LSLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVT--QFI---GDSLSLA 57

Query: 682 LVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPG 741
             AS EA S HP+AKA+V+YA                   KE      +L+V DF  + G
Sbjct: 58  YAASVEALSSHPIAKAIVKYA-------------------KEQGVK--ILEVKDFKEISG 96

Query: 742 RGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGI 801
            G++  IS K + V   +                           I V  +   I    I
Sbjct: 97  IGVRGKISDKIIEVKKAE-----------------------NNNDIAVYINGEPIASFNI 133

Query: 802 ADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREV 841
           +D  +      +E L   G++ ++++GD       +++E+
Sbjct: 134 SDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKEL 173

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score =  186 bits (475), Expect = 2e-55
 Identities = 57/152 (37%), Positives = 89/152 (58%), Gaps = 6/152 (3%)

Query: 46  RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIE 105
           ++  + + GMTCA+C +++E  L    GV    VAL+  KA++ +DP++++  +I   I+
Sbjct: 4   QKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQ 63

Query: 106 DAGFEAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALAT 165
           D GFEA ++ + + S    +       TI GMTCA+CV+++E  L    G+  A VALAT
Sbjct: 64  DLGFEAAVMEDYAGSDGNIE------LTITGMTCASCVHNIESKLTRTNGITYASVALAT 117

Query: 166 SLGEVEYDPTVISKDDIANAIEDAGFEASFVQ 197
           S   V++DP +I   DI   IE+ GF AS  Q
Sbjct: 118 SKALVKFDPEIIGPRDIIKIIEEIGFHASLAQ 149

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score =  113 bits (286), Expect = 1e-29
 Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 2/132 (1%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
              I GMTCA+CV+++E  L+   GV   +VAL     E++YDP VI   +IA  I+D G
Sbjct: 7   FLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLG 66

Query: 191 FEASFVQSS--GQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDP 248
           FEA+ ++        I L +TG+ C    H +E  L+   G+        + +  V FDP
Sbjct: 67  FEAAVMEDYAGSDGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDP 126

Query: 249 EALSSRSLVDGI 260
           E +  R ++  I
Sbjct: 127 EIIGPRDIIKII 138

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score = 93.2 bits (232), Expect = 2e-22
 Identities = 30/75 (40%), Positives = 44/75 (58%)

Query: 39  ERIGDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDE 98
           E        I++ +TGMTCA+C +++E  L    G+  ASVAL  +KA V FDP+++   
Sbjct: 73  EDYAGSDGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPR 132

Query: 99  DIKNAIEDAGFEAEI 113
           DI   IE+ GF A +
Sbjct: 133 DIIKIIEEIGFHASL 147

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151

 Score =  172 bits (437), Expect = 5e-50
 Identities = 48/154 (31%), Positives = 70/154 (45%), Gaps = 14/154 (9%)

Query: 45  MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAI 104
            + I + V+GMTCAAC+  +E  L  + GV  A+V L     +V++DP       I+  I
Sbjct: 5   QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKI 64

Query: 105 EDAGFEAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALA 164
           E  G+                 T   ++ I GMTCAAC N +E  L  + GV  A V  A
Sbjct: 65  EKLGYHVV--------------TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFA 110

Query: 165 TSLGEVEYDPTVISKDDIANAIEDAGFEASFVQS 198
                VEY+P   S  D+  A++  G++      
Sbjct: 111 LETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE 144

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151

 Score =  112 bits (281), Expect = 7e-29
 Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 6/130 (4%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
              + GMTCAAC   +E  L+ +PGV  A V LAT    V YDP       I   IE  G
Sbjct: 9   AMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLG 68

Query: 191 FEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEA 250
           +          +K    + G+ C   A+ +E  L+  +GV     +     + V ++P+ 
Sbjct: 69  YHVV------TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKE 122

Query: 251 LSSRSLVDGI 260
            S   L + +
Sbjct: 123 ASVSDLKEAV 132

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score =  170 bits (432), Expect = 7e-49
 Identities = 57/184 (30%), Positives = 85/184 (46%), Gaps = 20/184 (10%)

Query: 42  GDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIK 101
           G  +  +Q+ + GM C +C  ++E  +  L GV    V+L    A V +DP       ++
Sbjct: 16  GSHVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQ 75

Query: 102 NAIE---DAGFEAEILAESSTSGPKPQ-----------------GTIVGQYTIGGMTCAA 141
            AIE      F+  +   +  SG   +                         I GMTCA+
Sbjct: 76  RAIEALPPGNFKVSLPDGAEGSGTDHRSSSSHSPGSPPRNQVQGTCSTTLIAIAGMTCAS 135

Query: 142 CVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQ 201
           CV+S+EG++  L GV++  V+LA     V Y+P VIS +++  AIED GFEAS V  S  
Sbjct: 136 CVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVSESCS 195

Query: 202 DKIL 205
              L
Sbjct: 196 TNPL 199

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score = 99.3 bits (247), Expect = 7e-24
 Identities = 30/85 (35%), Positives = 56/85 (65%)

Query: 38  KERIGDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKD 97
           + ++        + + GMTCA+C +S+EG +  L+GV + SV+L +  A V+++P ++  
Sbjct: 114 RNQVQGTCSTTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISP 173

Query: 98  EDIKNAIEDAGFEAEILAESSTSGP 122
           E+++ AIED GFEA +++ES ++ P
Sbjct: 174 EELRAAIEDMGFEASVVSESCSTNP 198

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score = 98.9 bits (246), Expect = 8e-24
 Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 28/177 (15%)

Query: 112 EILAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVE 171
           +    S T G +    +  Q  I GM C +CV ++E  +  L GV+   V+L     +V+
Sbjct: 4   QNFNNSETLGHQGSHVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVK 63

Query: 172 YDPTVISKDDIANAIE---DAGFEASFVQSS-------------------------GQDK 203
           YDP+  S   +  AIE      F+ S    +                             
Sbjct: 64  YDPSCTSPVALQRAIEALPPGNFKVSLPDGAEGSGTDHRSSSSHSPGSPPRNQVQGTCST 123

Query: 204 ILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGI 260
            L+ + G+ C    H +EG++S  +GV+Q       G   VL++P  +S   L   I
Sbjct: 124 TLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAI 180

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score = 42.7 bits (100), Expect = 2e-04
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 5/113 (4%)

Query: 178 SKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDK 237
           S +   N  E  G + S V       + L++ G+ C+     +E  +    GV+  +   
Sbjct: 1   SANQNFNNSETLGHQGSHVV-----TLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSL 55

Query: 238 ISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSRDSEETSNM 290
            +   +V +DP   S  +L   I     G F++ + +      +     +S+ 
Sbjct: 56  ENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVSLPDGAEGSGTDHRSSSSHS 108

>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113

 Score =  150 bits (382), Expect = 5e-43
 Identities = 57/118 (48%), Positives = 76/118 (64%), Gaps = 6/118 (5%)

Query: 424 DAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGT 483
           +AIKKLV L   TA+ V++D      +E  +    +  GD + V PG K+P DG+VV G 
Sbjct: 1   EAIKKLVGLQAKTAV-VIRDG-----KEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE 54

Query: 484 SYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQ 541
           SYV+ESM++GE VPVLK     V G TIN  GVL I+AT+VG + +L+QI+ LVE A 
Sbjct: 55  SYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAM 112

>2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A Length = 165

 Score =  120 bits (301), Expect = 1e-31
 Identities = 48/181 (26%), Positives = 69/181 (38%), Gaps = 57/181 (31%)

Query: 661 GRATVTTAKVF---TKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDG 717
               V    +      +   + L +V +AEASSEHPL  AV +Y +              
Sbjct: 4   MVPRVMRVLLLGDVATLPLRKVLAVVGTAEASSEHPLGVAVTKYCKEEL----------- 52

Query: 718 QSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQ------------------------- 752
                   G+  L   +DF A+PG GI C +S  +                         
Sbjct: 53  --------GTETLGYCTDFQAVPGCGIGCKVSNVEGILAHSERPLSAPASHLNEAGSLPA 104

Query: 753 ----------VLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIA 802
                     VL+GNR+ L  +G+TI   V   + + E   +T ILVA D  L G++ IA
Sbjct: 105 EKDAVPQTFSVLIGNREWLRRNGLTISSDVSDAMTDHEMKGQTAILVAIDGVLCGMIAIA 164

Query: 803 D 803
           D
Sbjct: 165 D 165

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} Length = 74

 Score =  106 bits (267), Expect = 5e-28
 Identities = 61/72 (84%), Positives = 66/72 (91%)

Query: 45  MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAI 104
           MR+IQVGVTGMTCAACSNSVE ALM + GV KASVALLQN+ADVVFDP+LVK+EDIK  I
Sbjct: 1   MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEI 60

Query: 105 EDAGFEAEILAE 116
           EDAGFEAEILAE
Sbjct: 61  EDAGFEAEILAE 72

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} Length = 74

 Score = 97.0 bits (242), Expect = 1e-24
 Identities = 32/68 (47%), Positives = 43/68 (63%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
           Q  + GMTCAAC NSVE  L  + GV +A VAL  +  +V +DP ++ ++DI   IEDAG
Sbjct: 5   QVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAG 64

Query: 191 FEASFVQS 198
           FEA  +  
Sbjct: 65  FEAEILAE 72

>2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* Length = 185

 Score =  109 bits (272), Expect = 2e-27
 Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 37/184 (20%)

Query: 657 TLT-QGRATVTTAKVFT---KMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHF----- 707
           + T  G   V   KV T   ++   + L +V +AE++SEHPL  A+ +Y +         
Sbjct: 1   SFTMHGTPVVNQVKVLTESNRISHHKILAIVGTAESNSEHPLGTAITKYCKQELDTETLG 60

Query: 708 ------------------FDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFIS 749
                               +  L+ +  +    +  +  L+ +   +          I 
Sbjct: 61  TCIDFQVVPGCGISCKVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIID 120

Query: 750 GK----------QVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVM 799
            +          +VL+GNR+ +  +G+ I + V  F+ E E   RT +LVA DD L G++
Sbjct: 121 AQISNALNAQQYKVLIGNREWMIRNGLVINNDVNDFMTEHERKGRTAVLVAVDDELCGLI 180

Query: 800 GIAD 803
            IAD
Sbjct: 181 AIAD 184

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Length = 71

 Score =  102 bits (257), Expect = 9e-27
 Identities = 22/70 (31%), Positives = 39/70 (55%)

Query: 43  DGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKN 102
           + M ++ + V GM+C  C N++E ++  L GV +  V L +   +V  D  +V  +DI  
Sbjct: 2   NAMEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVA 61

Query: 103 AIEDAGFEAE 112
            IED G++ +
Sbjct: 62  VIEDQGYDVQ 71

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Length = 71

 Score = 95.4 bits (238), Expect = 4e-24
 Identities = 23/63 (36%), Positives = 36/63 (57%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
              + GM+C  CVN++E  ++ L GV++  V LA    EV  D +V++  DI   IED G
Sbjct: 8   TLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQG 67

Query: 191 FEA 193
           ++ 
Sbjct: 68  YDV 70

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} Length = 95

 Score =  102 bits (256), Expect = 2e-26
 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 114 LAESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYD 173
           L        K +      + + G+ C + V  +E IL+ L GVK   V + +    V +D
Sbjct: 2   LQNKEEEKKKVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHD 61

Query: 174 PTVISKDDIANAIEDAGFEASFVQSSGQDK 203
             +IS   IA A+ +A  EA+ V+ +G+  
Sbjct: 62  SLLISPFQIAKALNEARLEAN-VRVNGETS 90

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} Length = 95

 Score = 98.7 bits (246), Expect = 6e-25
 Identities = 21/86 (24%), Positives = 37/86 (43%)

Query: 35  DGKKERIGDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDL 94
             ++++    +++    V G+ C +    +E  L  L GV + SV +      VV D  L
Sbjct: 5   KEEEKKKVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLL 64

Query: 95  VKDEDIKNAIEDAGFEAEILAESSTS 120
           +    I  A+ +A  EA +     TS
Sbjct: 65  ISPFQIAKALNEARLEANVRVNGETS 90

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A Length = 79

 Score =  102 bits (255), Expect = 2e-26
 Identities = 23/73 (31%), Positives = 41/73 (56%)

Query: 44  GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNA 103
           G+  + + V GMTC +C  ++E  +  + GV    V+L +  A +++DP L   + ++ A
Sbjct: 6   GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEA 65

Query: 104 IEDAGFEAEILAE 116
           I+D GF+A I   
Sbjct: 66  IDDMGFDAVIHNP 78

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A Length = 79

 Score = 95.9 bits (239), Expect = 3e-24
 Identities = 20/65 (30%), Positives = 33/65 (50%)

Query: 134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
           + GMTC +CV ++E  +  + GV    V+L      + YDP + +   +  AI+D GF+A
Sbjct: 14  VEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDA 73

Query: 194 SFVQS 198
                
Sbjct: 74  VIHNP 78

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920

 Score =  115 bits (289), Expect = 3e-26
 Identities = 93/481 (19%), Positives = 174/481 (36%), Gaps = 98/481 (20%)

Query: 402 AMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQS 461
            +L+   + G   E     +    + +L +     A+ V++D  G     +EI+A  +  
Sbjct: 149 GLLLLNAVVGFVQE----FQAGSIVDELKKTLALKAV-VLRD--GT---LKEIEAPEVVP 198

Query: 462 GDTLKVLPGTKLPADGIVVWGTSY--VNESMVTGEAVPVLKEINSPVIGGTINLHGVLHI 519
           GD L+V  GT +PADG +V   ++  V++S +TGE++ V K     V   +    G   +
Sbjct: 199 GDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKHKGDQVFASSAVKRGEAFV 258

Query: 520 QATKVGSDAVLSQIISLVETAQMSKAPIQKFAD-------FVASIFVPIVVTLALFTWLC 572
             T  G +  + +  +LV  A        +  +        +    + IV   + +    
Sbjct: 259 VITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSFYR--- 315

Query: 573 WYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANN- 631
                                 V  L F++++ +I  P  L    P  V     VGA   
Sbjct: 316 ------------------SNPIVQILEFTLAITIIGVPVGL----PAVVTTTMAVGAAYL 353

Query: 632 ---GVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASA-- 686
                +++   A+E    ++ +  DKTGTLT+ + ++        +D  + +     A  
Sbjct: 354 AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGVDPEDLMLTACLAAS 413

Query: 687 --------------EASSEHPLAKAVVEYARHFHF--FDDPSLNPDGQSHSKESTGSGWL 730
                         ++   +P AK+V+   +   F  FD           SK+       
Sbjct: 414 RKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFD---------PVSKKVVAV--- 461

Query: 731 LDVSDFSALPGRGIQCFISG--KQVLVGNRKLLNESGITIPDHVESFVVELEESARTG-- 786
             V      P       + G    VL    K + E      +  +++  ++ E A  G  
Sbjct: 462 --VES----PQGERITCVKGAPLFVL----KTVEEDHPIPEEVDQAYKNKVAEFATRGFR 511

Query: 787 -ILVAYDDN-----LIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVARE 840
            + VA         ++G+M   DP + +    V     +G+   M+TGD    A   +R+
Sbjct: 512 SLGVARKRGEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQ 571

Query: 841 V 841
           +
Sbjct: 572 L 572

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A Length = 84

 Score =  101 bits (253), Expect = 5e-26
 Identities = 25/82 (30%), Positives = 41/82 (50%)

Query: 122 PKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDD 181
               G +V +  + GMTC +C +++EG +  L GV+R  V+L      + Y P +IS ++
Sbjct: 3   MAQAGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEE 62

Query: 182 IANAIEDAGFEASFVQSSGQDK 203
           +   IE  GF A   +     K
Sbjct: 63  MKKQIEAMGFPAFVKKQPKYLK 84

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A Length = 84

 Score =  100 bits (252), Expect = 7e-26
 Identities = 25/76 (32%), Positives = 45/76 (59%)

Query: 44  GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNA 103
           G   +++ V GMTC +C++++EG +  L+GV +  V+L   +A +V+ P L+  E++K  
Sbjct: 7   GEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQ 66

Query: 104 IEDAGFEAEILAESST 119
           IE  GF A +  +   
Sbjct: 67  IEAMGFPAFVKKQPKY 82

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B Length = 72

 Score =  100 bits (251), Expect = 7e-26
 Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%)

Query: 46  RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIE 105
           R + + V GMTC+AC+N++   L  LKGV K  ++L+ N+  V +D + V  + IK  IE
Sbjct: 2   REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNE-VTADSIKEIIE 60

Query: 106 DAGFEAEILAES 117
           D GF+ EIL +S
Sbjct: 61  DCGFDCEILRDS 72

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B Length = 72

 Score = 96.2 bits (240), Expect = 2e-24
 Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
           + GMTC+AC N++   LR L GV +  ++L T+  +V YD  V + D I   IED GF+ 
Sbjct: 8   VHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEV-TADSIKEIIEDCGFDC 66

Query: 194 SFVQSS 199
             ++ S
Sbjct: 67  EILRDS 72

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A Length = 77

 Score = 99.7 bits (249), Expect = 1e-25
 Identities = 26/65 (40%), Positives = 38/65 (58%)

Query: 134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
           + GMTCA+CV ++E  LR   G+   +VAL     EV Y+P VI    IA  I + GF A
Sbjct: 9   VTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGA 68

Query: 194 SFVQS 198
           + +++
Sbjct: 69  TVIEN 73

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A Length = 77

 Score = 97.8 bits (244), Expect = 8e-25
 Identities = 23/70 (32%), Positives = 40/70 (57%)

Query: 47  RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIED 106
           +  + VTGMTCA+C  ++E  L   +G+    VAL+  KA+V ++P +++   I   I +
Sbjct: 4   KCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRE 63

Query: 107 AGFEAEILAE 116
            GF A ++  
Sbjct: 64  LGFGATVIEN 73

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A Length = 72

 Score = 99.3 bits (248), Expect = 2e-25
 Identities = 32/61 (52%), Positives = 42/61 (68%)

Query: 134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
           I GMTC +CV S+EG++   PGVK   V+LA S G VEYDP + S + +  AIED GF+A
Sbjct: 9   IDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDA 68

Query: 194 S 194
           +
Sbjct: 69  T 69

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A Length = 72

 Score = 98.5 bits (246), Expect = 3e-25
 Identities = 24/69 (34%), Positives = 37/69 (53%)

Query: 45  MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAI 104
            +   + + GMTC +C  S+EG +    GV    V+L  +   V +DP L   E ++ AI
Sbjct: 2   TQETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAI 61

Query: 105 EDAGFEAEI 113
           ED GF+A +
Sbjct: 62  EDMGFDATL 70

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A Length = 75

 Score = 99.3 bits (248), Expect = 2e-25
 Identities = 22/72 (30%), Positives = 40/72 (55%)

Query: 45  MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAI 104
           +  + + V GMTC +C  ++E  +  + GV    V+L +  A +++DP L   + ++ AI
Sbjct: 1   VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAI 60

Query: 105 EDAGFEAEILAE 116
           +D GF+A I   
Sbjct: 61  DDMGFDAVIHNI 72

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A Length = 75

 Score = 97.4 bits (243), Expect = 1e-24
 Identities = 21/68 (30%), Positives = 35/68 (51%)

Query: 134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
           + GMTC +CV ++E  +  + GV    V+L      + YDP + +   +  AI+D GF+A
Sbjct: 8   VEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDA 67

Query: 194 SFVQSSGQ 201
                 G+
Sbjct: 68  VIHNIEGR 75

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Length = 69

 Score = 97.7 bits (244), Expect = 6e-25
 Identities = 27/67 (40%), Positives = 38/67 (56%)

Query: 45  MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAI 104
           M +  + V GM+C  C  +VE ++  L GV+   V L   K DV FD D V  +DI +AI
Sbjct: 1   MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAI 60

Query: 105 EDAGFEA 111
           ED G++ 
Sbjct: 61  EDQGYDV 67

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Length = 69

 Score = 93.5 bits (233), Expect = 2e-23
 Identities = 23/63 (36%), Positives = 34/63 (53%)

Query: 132 YTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGF 191
             + GM+C  CV +VE  +  L GV    V L     +V +D   +S  DIA+AIED G+
Sbjct: 6   LQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGY 65

Query: 192 EAS 194
           + +
Sbjct: 66  DVA 68

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A Length = 75

 Score = 97.8 bits (244), Expect = 7e-25
 Identities = 28/65 (43%), Positives = 39/65 (60%)

Query: 134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
           + GMTCA+CV+ +E  L    G+    VALAT+   ++YDP +I   DI + IE  GFE 
Sbjct: 10  VRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEP 69

Query: 194 SFVQS 198
           S V+ 
Sbjct: 70  SLVKI 74

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A Length = 75

 Score = 96.2 bits (240), Expect = 2e-24
 Identities = 27/71 (38%), Positives = 44/71 (61%)

Query: 44  GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNA 103
           G   +++ V GMTCA+C + +E +L   +G+   SVAL  NKA + +DP+++   DI + 
Sbjct: 2   GDGVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHT 61

Query: 104 IEDAGFEAEIL 114
           IE  GFE  ++
Sbjct: 62  IESLGFEPSLV 72

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP} Length = 71

 Score = 97.0 bits (242), Expect = 1e-24
 Identities = 27/68 (39%), Positives = 40/68 (58%)

Query: 45  MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAI 104
           ++  Q+ V GM CAAC++S+E AL  LKGVA+ASV +   +  V +DP  V +  I+  I
Sbjct: 2   LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERI 61

Query: 105 EDAGFEAE 112
              G+   
Sbjct: 62  AALGYTLA 69

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP} Length = 71

 Score = 93.9 bits (234), Expect = 1e-23
 Identities = 26/64 (40%), Positives = 34/64 (53%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
           Q  +GGM CAAC +S+E  L  L GV  A V +AT    V YDP  +S+  I   I   G
Sbjct: 6   QMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALG 65

Query: 191 FEAS 194
           +  +
Sbjct: 66  YTLA 69

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1 Length = 68

 Score = 96.6 bits (241), Expect = 1e-24
 Identities = 24/67 (35%), Positives = 37/67 (55%)

Query: 48  IQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDA 107
            +  V GM+C  C   +E A+  + GV K  V L + KA V FD   V+  +I  AI + 
Sbjct: 2   QEFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINEL 61

Query: 108 GFEAEIL 114
           G++AE++
Sbjct: 62  GYQAEVI 68

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1 Length = 68

 Score = 96.2 bits (240), Expect = 2e-24
 Identities = 18/66 (27%), Positives = 35/66 (53%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
           ++++ GM+C  CV  +E  +  + GVK+  V L      V++D   +   +I  AI + G
Sbjct: 3   EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELG 62

Query: 191 FEASFV 196
           ++A  +
Sbjct: 63  YQAEVI 68

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A Length = 72

 Score = 94.3 bits (235), Expect = 1e-23
 Identities = 21/69 (30%), Positives = 37/69 (53%)

Query: 45  MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAI 104
            + + + V GMTC+AC  +V+ A+  ++GV+K  V     +A V FD      + +  A 
Sbjct: 2   TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKAT 61

Query: 105 EDAGFEAEI 113
            DAG+ + +
Sbjct: 62  ADAGYPSSV 70

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A Length = 72

 Score = 89.7 bits (223), Expect = 4e-22
 Identities = 20/64 (31%), Positives = 31/64 (48%)

Query: 134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
           + GMTC+AC  +V+  +  + GV +  V   T    V +D    S   +  A  DAG+ +
Sbjct: 9   VPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPS 68

Query: 194 SFVQ 197
           S  Q
Sbjct: 69  SVKQ 72

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A Length = 90

 Score = 94.4 bits (235), Expect = 1e-23
 Identities = 20/74 (27%), Positives = 35/74 (47%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
            + I GM C +CV+++E  L  L  V   VV+L      V Y+ + ++ + +  AIE   
Sbjct: 6   TFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVS 65

Query: 191 FEASFVQSSGQDKI 204
                V  + + +I
Sbjct: 66  PGLYRVSITSEVEI 79

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A Length = 90

 Score = 92.9 bits (231), Expect = 5e-23
 Identities = 19/71 (26%), Positives = 34/71 (47%)

Query: 48  IQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDA 107
               + GM C +C +++E  L  L+ V+   V+L    A VV++   V  E ++ AIE  
Sbjct: 5   ATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAV 64

Query: 108 GFEAEILAESS 118
                 ++ +S
Sbjct: 65  SPGLYRVSITS 75

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A Length = 80

 Score = 93.9 bits (234), Expect = 1e-23
 Identities = 22/75 (29%), Positives = 39/75 (52%)

Query: 45  MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAI 104
             + +  + GMTCAAC+N +E  L  ++GVA A V        V ++P      D+K A+
Sbjct: 2   TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAV 61

Query: 105 EDAGFEAEILAESST 119
           +  G++ ++  E  +
Sbjct: 62  DKLGYKLKLKGEQDS 76

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A Length = 80

 Score = 90.1 bits (224), Expect = 3e-22
 Identities = 24/64 (37%), Positives = 34/64 (53%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
           ++ I GMTCAAC N +E  L  + GV  A V  A     VEY+P   S  D+  A++  G
Sbjct: 6   EFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLG 65

Query: 191 FEAS 194
           ++  
Sbjct: 66  YKLK 69

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A Length = 76

 Score = 89.7 bits (223), Expect = 4e-22
 Identities = 24/68 (35%), Positives = 36/68 (52%)

Query: 46  RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIE 105
           + I + V+GMTCAAC+  +E  L  + GV  A+V L     +V++DP       I+  IE
Sbjct: 6   KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE 65

Query: 106 DAGFEAEI 113
             G+   I
Sbjct: 66  KLGYHVVI 73

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A Length = 76

 Score = 89.3 bits (222), Expect = 5e-22
 Identities = 25/64 (39%), Positives = 30/64 (46%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
              + GMTCAAC   +E  L+ +PGV  A V LAT    V YDP       I   IE  G
Sbjct: 9   AMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLG 68

Query: 191 FEAS 194
           +   
Sbjct: 69  YHVV 72

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A Length = 71

 Score = 80.9 bits (200), Expect = 4e-19
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
              + GM CAAC +S+E  +  +PGV+   V  A     V Y     +   + +A+E AG
Sbjct: 6   NLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGET-TPQILTDAVERAG 64

Query: 191 FEASFVQ 197
           + A  ++
Sbjct: 65  YHARVLK 71

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A Length = 71

 Score = 79.7 bits (197), Expect = 1e-18
 Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 46  RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIE 105
           + I + + GM CAAC++S+E A+  + GV    V     +A V +  +    + + +A+E
Sbjct: 3   QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGE-TTPQILTDAVE 61

Query: 106 DAGFEAEIL 114
            AG+ A +L
Sbjct: 62  RAGYHARVL 70

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A Length = 69

 Score = 79.7 bits (197), Expect = 1e-18
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
              I GMTC +C   V+  L  +PGV+ A+V+      ++   P   S D +  A+   G
Sbjct: 3   HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGT-SPDALTAAVAGLG 61

Query: 191 FEASFVQS 198
           ++A+   +
Sbjct: 62  YKATLADA 69

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A Length = 69

 Score = 77.4 bits (191), Expect = 8e-18
 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 48  IQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDA 107
             + +TGMTC +C+  V+ AL  + GV  A V+  +  A +   P     + +  A+   
Sbjct: 2   THLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPG-TSPDALTAAVAGL 60

Query: 108 GFEAEI 113
           G++A +
Sbjct: 61  GYKATL 66

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A Length = 73

 Score = 79.8 bits (197), Expect = 1e-18
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
            + + GM CAAC   VE  +R L GV +  V  AT    V+ D  + +   + +A++ AG
Sbjct: 6   SWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRA--QVESALQKAG 63

Query: 191 FEASFVQSS 199
           +     Q++
Sbjct: 64  YSLRDEQAA 72

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A Length = 73

 Score = 77.5 bits (191), Expect = 8e-18
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 2/71 (2%)

Query: 47  RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIED 106
           R    V+GM CAAC+  VE A+  L GV +  V     K  V  D D+     +++A++ 
Sbjct: 4   RYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIR--AQVESALQK 61

Query: 107 AGFEAEILAES 117
           AG+       +
Sbjct: 62  AGYSLRDEQAA 72

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Length = 66

 Score = 79.2 bits (196), Expect = 2e-18
 Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)

Query: 48  IQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDA 107
           +++ V GMTC  C  +V  AL  + GV K  V+L + +A V    D    + +  A+E+ 
Sbjct: 2   LKLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTAD---PKALVQAVEEE 58

Query: 108 GFEAEILA 115
           G++AE+LA
Sbjct: 59  GYKAEVLA 66

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Length = 66

 Score = 74.2 bits (183), Expect = 8e-17
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
           +  + GMTC  CV +V   L+ +PGV++  V+L      VE          +  A+E+ G
Sbjct: 3   KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADP---KALVQAVEEEG 59

Query: 191 FEASFV 196
           ++A  +
Sbjct: 60  YKAEVL 65

>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* Length = 156

 Score = 82.2 bits (203), Expect = 2e-18
 Identities = 26/160 (16%), Positives = 54/160 (33%), Gaps = 26/160 (16%)

Query: 655 TGTLTQG--RAT--VTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDD 710
           +G   +   +A+  +    V    D          A  + E P  +++V  A+      +
Sbjct: 14  SGHGGRHNRQASEFIPAQGV----DEKTLADAAQLASLADETPEGRSIVILAKQRFNLRE 69

Query: 711 PSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGN----RKLLNESGI 766
             +                      F+A   R     I  + +  G+    R+ +  +G 
Sbjct: 70  RDVQSLH-------------ATFVPFTAQ-SRMSGINIDNRMIRKGSVDAIRRHVEANGG 115

Query: 767 TIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVK 806
             P  V+  V ++     T ++V     ++GV+ + D VK
Sbjct: 116 HFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVK 155

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} Length = 66

 Score = 74.2 bits (183), Expect = 1e-16
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 52  VTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA 111
           V  +TC  C + +E  +  ++GV+   V++ +    V FD      + IK A+ DAG E 
Sbjct: 7   VPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAP-ATQDLIKEALLDAGQEV 65

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} Length = 66

 Score = 73.8 bits (182), Expect = 1e-16
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 132 YTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGF 191
           + +  +TC  CV+ +E  +  + GV    V++      VE+D    ++D I  A+ DAG 
Sbjct: 5   FQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPA-TQDLIKEALLDAGQ 63

Query: 192 EA 193
           E 
Sbjct: 64  EV 65

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885

 Score = 83.1 bits (206), Expect = 2e-16
 Identities = 64/332 (19%), Positives = 125/332 (37%), Gaps = 37/332 (11%)

Query: 383 ALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVK 442
            +   +  G   P  ++    +I  ++    +  + +    +A   L+         V++
Sbjct: 78  IMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTK-VLR 136

Query: 443 DKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTS-YVNESMVTGEAVPVLKE 501
           D  GK     E +A ++  GD + +  G  +PAD  ++ G    V++S +TGE++PV K 
Sbjct: 137 D--GK---WSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKH 191

Query: 502 INSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPI 561
               V  G+    G +       G      +   LV++        QK    +   F   
Sbjct: 192 PGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAI-GNFCIC 249

Query: 562 VVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAV 621
            + + +       V  ++  YP Q        +   +   + +++   P A+    PT +
Sbjct: 250 SIAIGM-------VIEIIVMYPIQ-----RRKYRDGIDNLLVLLIGGIPIAM----PTVL 293

Query: 622 MVATGVGANN----GVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRG 677
            V   +G++     G + K   A+E    +  +  DKTGTLT  + +V   K   ++   
Sbjct: 294 SVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVD--KNLVEVFCK 351

Query: 678 EF---LTLVASAEASSEH---PLAKAVVEYAR 703
                  L+ +A AS       +  A+V    
Sbjct: 352 GVEKDQVLLFAAMASRVENQDAIDAAMVGMLA 383

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885

 Score = 60.4 bits (147), Expect = 2e-09
 Identities = 12/47 (25%), Positives = 23/47 (48%)

Query: 795 LIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREV 841
            +G++ + DP + ++A  +   L +GV   M+TGD         R +
Sbjct: 479 FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 525

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus} Length = 73

 Score = 72.0 bits (177), Expect = 8e-16
 Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 5/78 (6%)

Query: 42  GDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIK 101
           GD + +I + ++G++C  C   V+ AL    G     V L  N+A V  + + V  +   
Sbjct: 1   GDSVEKIVLELSGLSCHHCVARVKKALEEA-GAKVEKVDL--NEAVVAGNKEDV--DKYI 55

Query: 102 NAIEDAGFEAEILAESST 119
            A+E AG++A++ + + +
Sbjct: 56  KAVEAAGYQAKLRSSAWS 73

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus} Length = 73

 Score = 59.3 bits (144), Expect = 2e-11
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 5/67 (7%)

Query: 133 TIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFE 192
            + G++C  CV  V+  L    G K   V L      V  +      D    A+E AG++
Sbjct: 10  ELSGLSCHHCVARVKKALEEA-GAKVEKVDLNE--AVVAGNKE--DVDKYIKAVEAAGYQ 64

Query: 193 ASFVQSS 199
           A    S+
Sbjct: 65  AKLRSSA 71

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Length = 85

 Score = 68.3 bits (167), Expect = 2e-14
 Identities = 16/75 (21%), Positives = 24/75 (32%), Gaps = 3/75 (4%)

Query: 38  KERIGDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKD 97
           +E +      +   V  MTC  C+  ++GA+      A            V    D    
Sbjct: 14  RENLYFQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSD---A 70

Query: 98  EDIKNAIEDAGFEAE 112
             I   I  AG+  E
Sbjct: 71  AHIAEIITAAGYTPE 85

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Length = 85

 Score = 66.4 bits (162), Expect = 9e-14
 Identities = 15/79 (18%), Positives = 22/79 (27%), Gaps = 3/79 (3%)

Query: 115 AESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDP 174
             SS             + +  MTC  C   ++G +             A+    V    
Sbjct: 9   HHSSGRENLYFQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVG--- 65

Query: 175 TVISKDDIANAIEDAGFEA 193
            V     IA  I  AG+  
Sbjct: 66  GVSDAAHIAEIITAAGYTP 84

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034

 Score = 74.2 bits (183), Expect = 1e-13
 Identities = 63/268 (23%), Positives = 109/268 (40%), Gaps = 51/268 (19%)

Query: 420 GKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIV 479
            K+++ I     L P  A  V++D  G    + +I+A  +  GD +++  G ++PAD  +
Sbjct: 162 FKSTNIIASFKNLVPQQAT-VIRD--GD---KFQINADQLVVGDLVEMKGGDRVPADIRI 215

Query: 480 VWGTS-YVNESMVTGEAVPVLK--EINSPVIGGTINL------------HGVLHIQATKV 524
           +      V+ S +TGE+ P  +  E        T N+             G+        
Sbjct: 216 LQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGL----VVNT 271

Query: 525 GSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPE 584
           G   ++ +I SL    +  K PI    +    I   + +      +    +  +   Y  
Sbjct: 272 GDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFF----IVAMCIGYT- 326

Query: 585 QWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVG--ANNGVLIKGGDALE 642
                    F+ A++F +++VV   P  L LAT T  + +      A+   ++K  +A+E
Sbjct: 327 ---------FLRAMVFFMAIVVAYVPEGL-LATVTVCL-SLTAKRLASKNCVVKNLEAVE 375

Query: 643 ---RAQKIKYVIF-DKTGTLTQGRATVT 666
                     VI  DKTGTLTQ R TV+
Sbjct: 376 TLGSTS----VICSDKTGTLTQNRMTVS 399

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034

 Score = 52.6 bits (127), Expect = 4e-07
 Identities = 16/47 (34%), Positives = 24/47 (51%)

Query: 795 LIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREV 841
             G++ + DP +      V      G+R +MVTGD+  TA A+A  V
Sbjct: 595 FAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASV 641

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028

 Score = 74.2 bits (183), Expect = 1e-13
 Identities = 67/275 (24%), Positives = 112/275 (40%), Gaps = 55/275 (20%)

Query: 420 GKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIV 479
            K+S  +     + P  AL V++D  G+   +  I+A  + +GD ++V  G ++PAD  +
Sbjct: 157 AKSSRIMDSFKNMVPQQAL-VIRD--GE---KSTINAEFVVAGDLVEVKGGDRIPADLRI 210

Query: 480 VWGTS-YVNESMVTGEAVPVLK--EINSPVIGGTINL------------HGVLHIQATKV 524
           +      V+ S +TGE+ P  +  E +S     T N+             GV        
Sbjct: 211 ISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGV----VVYT 266

Query: 525 GSDAVLSQIISLVETAQMSKAPIQK-FADFVASIFVPIVVTLALFTWLCWYVAGVLGAYP 583
           G   V+ +I +L    ++ + PI      F+  I    V     F     ++  ++  Y 
Sbjct: 267 GDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSF-----FILSLILGYS 321

Query: 584 EQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVG--ANNGVLIKGGDAL 641
                     ++ A++F I ++V   P  L LAT T  +        A    L+K  +A+
Sbjct: 322 ----------WLEAVIFLIGIIVANVPEGL-LATVTVCL-TLTAKRMARKNCLVKNLEAV 369

Query: 642 E---RAQKIKYVIF-DKTGTLTQGRATVTTAKVFT 672
           E           I  DKTGTLTQ R TV    ++ 
Sbjct: 370 ETLGSTS----TICSDKTGTLTQNRMTVA--HMWF 398

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028

 Score = 51.9 bits (125), Expect = 8e-07
 Identities = 16/47 (34%), Positives = 26/47 (55%)

Query: 795 LIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREV 841
            +G+M + DP +      V      G++ +MVTGD+  TA A+A+ V
Sbjct: 590 FVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGV 636

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A Length = 71

 Score = 64.4 bits (157), Expect = 3e-13
 Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 3/64 (4%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
            Y + G++C  C    E  ++ + GV  A+V    S   V  + ++     +  A     
Sbjct: 6   VYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEASI---QQVEQAGAFEH 62

Query: 191 FEAS 194
            +  
Sbjct: 63  LKII 66

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A Length = 71

 Score = 60.9 bits (148), Expect = 5e-12
 Identities = 12/67 (17%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 46  RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIE 105
            +    V G++C  C+   E  +  ++GV +A V    +K  V  +  +   + ++ A  
Sbjct: 3   EKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEASI---QQVEQAGA 59

Query: 106 DAGFEAE 112
               +  
Sbjct: 60  FEHLKII 66

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Length = 64

 Score = 61.6 bits (150), Expect = 2e-12
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 3/65 (4%)

Query: 48  IQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDA 107
           IQ+ V  + C AC+ +V  A+      A   V L   K  +        +E ++ AI  A
Sbjct: 3   IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALG---EEQLRTAIASA 59

Query: 108 GFEAE 112
           G+E E
Sbjct: 60  GYEVE 64

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Length = 64

 Score = 58.9 bits (143), Expect = 2e-11
 Identities = 13/63 (20%), Positives = 26/63 (41%), Gaps = 3/63 (4%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
           Q T+  + C AC  +V   ++         V L +    +    + + ++ +  AI  AG
Sbjct: 4   QLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTIT---SALGEEQLRTAIASAG 60

Query: 191 FEA 193
           +E 
Sbjct: 61  YEV 63

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima} Length = 67

 Score = 58.3 bits (141), Expect = 5e-11
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 5/70 (7%)

Query: 47  RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIED 106
           R  + V  ++C  C   +  AL  L GV    V++ + K  V  +      + +   +E+
Sbjct: 2   RYVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETE----NLDSVLKKLEE 56

Query: 107 AGFEAEILAE 116
             +  E   E
Sbjct: 57  IDYPVESYQE 66

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima} Length = 67

 Score = 56.7 bits (137), Expect = 2e-10
 Identities = 13/68 (19%), Positives = 25/68 (36%), Gaps = 5/68 (7%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
              +  ++C  C   +   L  L GVK   V++      VE +    + D +   +E+  
Sbjct: 4   VLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETE----NLDSVLKKLEEID 58

Query: 191 FEASFVQS 198
           +     Q 
Sbjct: 59  YPVESYQE 66

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 59.5 bits (143), Expect = 4e-09
 Identities = 78/645 (12%), Positives = 168/645 (26%), Gaps = 243/645 (37%)

Query: 82  LQNKADV--VFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGPKPQGTIVGQYTIGGMTC 139
            Q K D+  VF+   V + D K+ ++D      IL++           I+          
Sbjct: 16  YQYK-DILSVFEDAFVDNFDCKD-VQD--MPKSILSKEEID------HIIMS-------- 57

Query: 140 AACVNSVEGILR--------GLPGVKRAVVA--------LATSLGEVEYDPTVISK---- 179
               ++V G LR            V++ V          L + +   +  P+++++    
Sbjct: 58  ---KDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIE 114

Query: 180 --DDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAH---FLEG------------ 222
             D + N  +   F    V    + +  L++   L EL       ++G            
Sbjct: 115 QRDRLYNDNQV--FAKYNVS---RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALD 169

Query: 223 ILSNFKGVRQFRF----------DKISGELEVL------FDPEALSS-------RSLVDG 259
           +  ++K   +  F          +     LE+L       DP   S        +  +  
Sbjct: 170 VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS 229

Query: 260 IAGRSNGKFQIR----------------VMNPF---AR--MTSRDS-------------- 284
           I        + +                  N F    +  +T+R                
Sbjct: 230 IQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHI 289

Query: 285 -----------EETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGD- 332
                      +E  ++   ++      +P    R +    P   +++       +    
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYLDCRPQDLP----REVLTTNPRRLSII----AESIRDGL 341

Query: 333 --WLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVALGTSAAYFYSVGALLYGVVT 390
             W NW  V+  +                  +T ++             S+  L      
Sbjct: 342 ATWDNWKHVNCDKL-----------------TTIIES------------SLNVL------ 366

Query: 391 GFWSPTYFETSAMLITFVLF-------GKYLEIL-AKGKTSDAIKKLVELAPATALLVVK 442
               P   E   M     +F          L ++      SD +  + +L      LV K
Sbjct: 367 ---EPA--EYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKL--HKYSLVEK 419

Query: 443 DK--------------VGKCIEEREIDALLIQSGDTLKVLPG---TKLPADGIVVWGTSY 485
                             K   E  +   ++   +  K            D        +
Sbjct: 420 QPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGH 479

Query: 486 VNESMVTGEAVPVLKEI----------------NSPVIGGTINLHGVL-----HIQATKV 524
             +++   E + + + +                     G  +N    L     +I     
Sbjct: 480 HLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDP 539

Query: 525 GSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFT 569
             + +++ I+  +   +       K+ D         ++ +AL  
Sbjct: 540 KYERLVNAILDFLPKIE-ENLICSKYTD---------LLRIALMA 574

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 1e-04
 Identities = 45/243 (18%), Positives = 76/243 (31%), Gaps = 59/243 (24%)

Query: 639 DALERAQKIKYVI------FDKTGTLTQGRATVTTAKVFTKMDRGEF-LTL--VASAEAS 689
            AL   +  K V+        KT  +        + KV  KMD   F L L    S E  
Sbjct: 142 QALLELRPAKNVLIDGVLGSGKT-WVAL--DVCLSYKVQCKMDFKIFWLNLKNCNSPETV 198

Query: 690 SEHPLAKAVVEYARHFHFFDDPSLNPDGQSHS--------------KESTGSGWLL---D 732
            E  L K + +   ++    D S N   + HS              +       LL   +
Sbjct: 199 LE-MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC-----LLVLLN 252

Query: 733 VSDFSALPGRGIQCFISGKQVLV--GNRKLLNESGITIPDHV--ESFVVELEESARTGIL 788
           V +  A     + C     ++L+    +++ +        H+  +   + L       +L
Sbjct: 253 VQNAKAWNAFNLSC-----KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL 307

Query: 789 VAYDDNLIGVMGIAD-PVKREAAVVVEGLLKM---GVRPVMVTGDNWRT----AHAVARE 840
           + Y    +      D P  RE        L +    +R  + T DNW+           E
Sbjct: 308 LKY----LD-CRPQDLP--REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIE 360

Query: 841 VCV 843
             +
Sbjct: 361 SSL 363

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98

 Score = 52.9 bits (127), Expect = 6e-09
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 55  MTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEIL 114
           MTC +C ++V  +L G+ GV    V L      V         ++++  +E  G +A + 
Sbjct: 27  MTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPS---QEVQALLEGTGRQAVLK 83

Query: 115 AESSTS 120
              S  
Sbjct: 84  GMGSGQ 89

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98

 Score = 51.4 bits (123), Expect = 3e-08
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 137 MTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFV 196
           MTC +CV++V   L+G+ GV+   V L   +  V    T +   ++   +E  G +A   
Sbjct: 27  MTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVH---TTLPSQEVQALLEGTGRQAVLK 83

Query: 197 QSSGQDK 203
                  
Sbjct: 84  GMGSGQL 90

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995

 Score = 58.0 bits (141), Expect = 1e-08
 Identities = 58/279 (20%), Positives = 103/279 (36%), Gaps = 46/279 (16%)

Query: 420 GKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIV 479
               +AI+ L E  P     V +    +    + I A  I  GD ++V  G K+PAD  +
Sbjct: 111 RNAENAIEALKEYEPEMGK-VYRA--DRKSV-QRIKARDIVPGDIVEVAVGDKVPADIRI 166

Query: 480 VWGTSY---VNESMVTGEAVPVLKEIN-----SPVIGGTINL------------HGVLHI 519
           +   S    V++S++TGE+V V+K          V     N+             G+   
Sbjct: 167 LSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGI--- 223

Query: 520 QATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVL 579
                G    + +I   +   +  K P+Q+  D        ++  + +  W    +  + 
Sbjct: 224 -VATTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVW----LINIG 278

Query: 580 GAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVG--ANNGVLIKG 637
                          ++    ++++ V A P  L  A  T  + A G    A    +++ 
Sbjct: 279 HFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGL-PAVITTCL-ALGTRRMAKKNAIVRS 336

Query: 638 GDALE---RAQKIKYVI-FDKTGTLTQGRATVTTAKVFT 672
             ++E          VI  DKTGTLT  + +V   K+F 
Sbjct: 337 LPSVETLGCTS----VICSDKTGTLTTNQMSVC--KMFI 369

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995

 Score = 50.7 bits (122), Expect = 2e-06
 Identities = 17/47 (36%), Positives = 29/47 (61%)

Query: 795 LIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREV 841
            +GV+G+ DP ++E    ++     G+R +M+TGDN  TA A+ R +
Sbjct: 594 FVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRI 640

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Length = 68

 Score = 50.8 bits (122), Expect = 2e-08
 Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 5/71 (7%)

Query: 45  MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAI 104
           M + +  V  MTC  C+ +V   L  L GV K  + L   K  +  +      + +   +
Sbjct: 1   MPKHEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESE---HSMDTLLATL 55

Query: 105 EDAGFEAEILA 115
           +  G     L 
Sbjct: 56  KKTGKTVSYLG 66

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Length = 68

 Score = 49.3 bits (118), Expect = 7e-08
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 4/61 (6%)

Query: 136 GMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195
            MTC  C  +V  +L  L GVK   + L      +E + ++   D +   ++  G   S+
Sbjct: 9   DMTCGGCAEAVSRVLNKLGGVK-YDIDLPNKKVCIESEHSM---DTLLATLKKTGKTVSY 64

Query: 196 V 196
           +
Sbjct: 65  L 65

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Length = 73

 Score = 44.8 bits (106), Expect = 3e-06
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 4/58 (6%)

Query: 55  MTCAACSNSVEGALMGLK-GVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA 111
           MTC+ CS +V   L  L+  V+K  ++L +   DV      +  + I   I+  G E 
Sbjct: 13  MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT---LPYDFILEKIKKTGKEV 67

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Length = 73

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 4/59 (6%)

Query: 137 MTCAACVNSVEGILRGL-PGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEAS 194
           MTC+ C  +V  +L  L P V +  ++L   L +V      +  D I   I+  G E  
Sbjct: 13  MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT---LPYDFILEKIKKTGKEVR 68

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 249

 Score = 46.7 bits (110), Expect = 1e-05
 Identities = 22/136 (16%), Positives = 42/136 (30%), Gaps = 3/136 (2%)

Query: 55  MTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEIL 114
           M C  C N ++  L  + G+   +  + Q    V      V    I N + + G +A I 
Sbjct: 15  MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAPSTIINTLRNCGKDAIIR 71

Query: 115 AESSTSGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDP 174
                +          Q           V  +  I++         + +        Y  
Sbjct: 72  GAGKPNSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHA 131

Query: 175 TVISKDDIANAIEDAG 190
           ++  K D++  +E  G
Sbjct: 132 SIHEKGDVSKGVESTG 147

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	845
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	100.0
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	100.0
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	100.0
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	100.0
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	100.0
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	100.0
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	100.0
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	100.0
2hc8_A	113	PACS, cation-transporting ATPase, P-type; copper,	99.95
2kij_A	124	Copper-transporting ATPase 1; actuator, menkes dis	99.95
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	99.82
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	99.87
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	99.82
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	99.8
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	99.79
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	99.75
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	99.75
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.75
1svj_A	156	Potassium-transporting ATPase B chain; alpha-beta	99.71
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	99.7
2kmv_A	185	Copper-transporting ATPase 1; menkes, nucleotide b	99.7
2arf_A	165	Wilson disease ATPase; P-type ATPase,ATP7B, copper	99.58
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	99.19
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	99.15
4a4j_A	69	Pacszia, cation-transporting ATPase PACS; hydrolas	99.12
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	99.09
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	99.06
4a4j_A	69	Pacszia, cation-transporting ATPase PACS; hydrolas	99.04
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	98.98
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	98.97
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	98.96
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	98.95
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	98.95
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	98.95
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	98.95
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	98.95
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	98.95
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	98.93
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	98.92
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	98.91
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	98.91
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	98.9
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	98.89
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	98.88
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	98.88
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	98.86
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	98.86
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	98.85
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	98.83
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	98.83
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	98.83
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	98.83
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	98.82
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	98.82
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	98.82
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	98.82
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	98.81
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	98.81
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	98.79
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	98.79
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	98.79
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	98.79
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	98.78
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	98.77
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	98.76
2kkh_A	95	Putative heavy metal transporter; zinc transport,	98.75
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	98.75
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	98.74
2kkh_A	95	Putative heavy metal transporter; zinc transport,	98.74
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	98.73
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	98.73
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	98.71
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	98.71
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	98.7
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	98.68
2kyz_A	67	Heavy metal binding protein; structural genomics,	98.68
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	98.66
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	98.64
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	98.62
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	98.61
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	98.6
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	98.6
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	98.58
2kyz_A	67	Heavy metal binding protein; structural genomics,	98.58
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	98.44
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	98.31
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	98.29
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.17
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	98.16
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	98.04
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	98.01
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	97.92
3gwi_A	170	Magnesium-transporting ATPase, P-type 1; P-type AT	97.29
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	94.06
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	93.87
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	93.02
4gxt_A	385	A conserved functionally unknown protein; structur	91.99
3mn1_A	189	Probable YRBI family phosphatase; structural genom	91.67
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	90.72
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	90.38
3fvv_A	232	Uncharacterized protein; unknown function, structu	89.55
3mmz_A	176	Putative HAD family hydrolase; structural genomics	88.8
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	88.27
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	88.11
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	87.54
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	87.15
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	86.65
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	85.89
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	85.5
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	85.13
4gwb_A	168	Peptide methionine sulfoxide reductase MSRA 3; str	84.63
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	83.52
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	82.52
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	82.18
2hsz_A	243	Novel predicted phosphatase; structural genomics,	82.02
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	81.37
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	81.28
1fvg_A	199	Peptide methionine sulfoxide reductase; oxidoreduc	80.63

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=100.00  E-value=1.5e-93  Score=846.24  Aligned_cols=573  Identities=37%  Similarity=0.591  Sum_probs=507.1

Q ss_pred             eeEEEEecccchhhhHHHHhhhccCCCceEEEeecCCCeEEEEeCCCCCChhhHHHhhhhcCCCcceEeecCcccccccc
Q 003131          203 KILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSR  282 (845)
Q Consensus       203 ~~~~~v~gm~c~~c~~~ie~~l~~~~gV~~~~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~~~~~~~~~~~~  282 (845)
                      +.++.|+||+|++|+.++|+.+++.+||.++++|+.++++.|+||+..++.+++.+.+++.|   |+....+.....+  
T Consensus         3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~G---y~~~~~~~~~~~~--   77 (723)
T 3j09_A            3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLG---YGVVDEQAAVSAE--   77 (723)
T ss_dssp             CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHC---CEESSCCCCCCCC--
T ss_pred             eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcC---Ccccccccccchh--
Confidence            46799999999999999999999999999999999999999999999999999999999999   7664332211111  


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHhhhccCCCchHHHHHHHHHHHhhhccChHHHHHHHHHHHcCC
Q 003131          283 DSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGS  362 (845)
Q Consensus       283 ~~~~~~~~~~~~~~a~ilal~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~  362 (845)
                       .++.++++++++.++++++|+++++++ ..              ++...|+++++++|++||+|+|||++||+++++++
T Consensus        78 -~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------------~~~~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~  141 (723)
T 3j09_A           78 -VEHLSRMKRKLYVAAFAGVLLLFLAHF-IS--------------LPYEDFVQLLIALPAIFYSGSSIFKAAFSALRRRT  141 (723)
T ss_dssp             -CCCCCCSCCCSSSTTTTHHHHHHHTTS-SC--------------SSSSCCSCCSTHHHHHHHHHHHHHHHTCCTTTTCS
T ss_pred             -hHHHHHHHHHHHHHHHHHHHHHHHHHH-hc--------------cchHHHHHHHHHHHHHHHhHHHHHHHHHHHHHcCC
Confidence             011122334455566677776655431 11              11234567788999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEe
Q 003131          363 TNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVK  442 (845)
Q Consensus       363 ~~md~L~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~  442 (845)
                      +|||+|+++|+.++|+||++.++....   ....||++++++++++++|+++|.++++|+++.+++|.++.|++++|+  
T Consensus       142 ~~md~l~~l~~~~a~~~s~~~~~~~~~---~~~~~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~--  216 (723)
T 3j09_A          142 LNMDVMYSMGVGAAFLASVLSTAGVLP---REYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVI--  216 (723)
T ss_dssp             TTSCSSCSCHHHHHHHHHHHHHHTTTT---CCCCCCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEE--
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEE--
Confidence            999999999999999999998875321   122389999999999999999999999999999999999999999999  


Q ss_pred             cCCCceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEecceeeeccccCCcceeeeccCCCceeccceeecceEEEEEE
Q 003131          443 DKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQAT  522 (845)
Q Consensus       443 ~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G~~~Vdes~LTGEs~pv~k~~~~~v~aGt~~~~g~~~~~v~  522 (845)
                       |||   ++++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|++|+.+|+||++.+|.++++|+
T Consensus       217 -r~g---~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~  292 (723)
T 3j09_A          217 -RDG---KEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRAT  292 (723)
T ss_dssp             -ETT---EEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEE
T ss_pred             -ECC---EEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECCeEEecccccCCCcceeecCCCeeccceEEecCcEEEEEE
Confidence             888   7799999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCccHHHHHHHHHHhhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHh
Q 003131          523 KVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSI  602 (845)
Q Consensus       523 ~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  602 (845)
                      ++|.+|.+++|.+++++++.+++|+|+.+|+++.+|+|++++++++++++|++..             ..++..++.+++
T Consensus       293 ~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~-------------~~~~~~~~~~~i  359 (723)
T 3j09_A          293 RVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA-------------HAPLLFAFTTLI  359 (723)
T ss_dssp             ECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSST-------------TCTTCCSHHHHH
T ss_pred             EecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------------CCcHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999988775532             123445678899


Q ss_pred             hhheeecccccchhhHHHHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCChhhHHHH
Q 003131          603 SVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTL  682 (845)
Q Consensus       603 ~vlv~~~P~~L~la~p~~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~~  682 (845)
                      ++++++|||+|++++|+++..++.+++++|+++|+++++|.+|++|++|||||||||+|+|+|.++...+ .+.++++.+
T Consensus       360 ~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~-~~~~~~l~~  438 (723)
T 3j09_A          360 AVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLN-GDERELLRL  438 (723)
T ss_dssp             HHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESS-SCHHHHHHH
T ss_pred             HHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCC-CCHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999874 577889999


Q ss_pred             HhhhhccCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEEcCeEEEEeehhhhh
Q 003131          683 VASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLN  762 (845)
Q Consensus       683 ~~~~~~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~g~~~~~g~~~~~~  762 (845)
                      +++++..++||+++|+++++...+.                     ......++++.+|+|+.+    ..+.+|+++++.
T Consensus       439 aa~~e~~s~hP~~~Ai~~~a~~~~~---------------------~~~~~~~~~~~~g~g~~~----~~~~~g~~~~~~  493 (723)
T 3j09_A          439 AAIAERRSEHPIAEAIVKKALEHGI---------------------ELGEPEKVEVIAGEGVVA----DGILVGNKRLME  493 (723)
T ss_dssp             HHHHHTTCCSHHHHHHHHHHHHTTC---------------------CCCSCCCCEEETTTEEEE----TTEEEECHHHHH
T ss_pred             HHHHhccCCCchhHHHHHHHHhcCC---------------------CcCCccceEEecCCceEE----EEEEECCHHHHH
Confidence            9999999999999999999987632                     123445677888999877    678899999999


Q ss_pred             hcCCCCChhhHHHHHHHHHccCeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 003131          763 ESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVC  842 (845)
Q Consensus       763 ~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~G  842 (845)
                      +.+...+++..+..++++.+|++++++++|++++|+++++|++|++++++|++||++|++++|+|||+..+|.++|+++|
T Consensus       494 ~~~~~~~~~~~~~~~~~~~~g~~~~~va~~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lg  573 (723)
T 3j09_A          494 DFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN  573 (723)
T ss_dssp             HTTCCCCHHHHHHHHHHHTTTCEEEEEEETTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHT
T ss_pred             hcCCCccHHHHHHHHHHHhcCCeEEEEEECCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcC
Confidence            98888888888888899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CC
Q 003131          843 VI  844 (845)
Q Consensus       843 I~  844 (845)
                      |+
T Consensus       574 i~  575 (723)
T 3j09_A          574 LD  575 (723)
T ss_dssp             CS
T ss_pred             Cc
Confidence            86

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=100.00  E-value=9.5e-90  Score=806.55  Aligned_cols=516  Identities=37%  Similarity=0.567  Sum_probs=467.0

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHhhhccCCCchHHHHHHHHHHHhhhccChHHHHHHHHHHHcC
Q 003131          282 RDSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNG  361 (845)
Q Consensus       282 ~~~~~~~~~~~~~~~a~ilal~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~  361 (845)
                      .+.++.+.++++++.++++++|+++++|..+..+   .     .-.+.+..|++++|++|++||+|||||++||++|+++
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~~~~~~~~~l~~~v~~~~g~~f~~~a~~~l~~~  144 (736)
T 3rfu_A           73 VVSPEYLDMRRRFWIALMLTIPVVILEMGGHGLK---H-----FISGNGSSWIQLLLATPVVLWGGWPFFKRGWQSLKTG  144 (736)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCTT---S-----SCSTTHHHHHHHHHHHHHHHTTTHHHHHHHHHHHTTS
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---h-----hccccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence            3456778889999999999999988877532210   0     0123467899999999999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhhhhcC-------CCCcchhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCC
Q 003131          362 STNMDVLVALGTSAAYFYSVGALLYGVVTG-------FWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAP  434 (845)
Q Consensus       362 ~~~md~L~~l~~~~a~~~s~~~~~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~  434 (845)
                      .+|||+|+++|+.+||+||++.++...+.+       +..+.||++++++++++++|+++|.++++|+++++++|.++.|
T Consensus       145 ~~~md~Lv~l~~~~a~~~S~~~~~~~~~~~~~~~~~~~~~~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p  224 (736)
T 3rfu_A          145 QLNMFTLIAMGIGVAWIYSMVAVLWPGVFPHAFRSQEGVVAVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVP  224 (736)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHCGGGSCSSSSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCC
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHhcccccccccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999999999988643321       1246799999999999999999999999999999999999999


Q ss_pred             CeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEecceeeeccccCCcceeeeccCCCceeccceeec
Q 003131          435 ATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLH  514 (845)
Q Consensus       435 ~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G~~~Vdes~LTGEs~pv~k~~~~~v~aGt~~~~  514 (845)
                      +++++++  +||   ++++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|++|+.+++||++.+
T Consensus       225 ~~a~vv~--~dg---~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~  299 (736)
T 3rfu_A          225 ESAHRIK--EDG---SEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSFVDESMVTGEPIPVAKEASAKVIGATINQT  299 (736)
T ss_dssp             CEEEEEE--TTE---EEEEEETTTCCTTCEECCCSSEECCSCEEECSSCEEEECSSSTTCSSCEEECTTCEECTTCEEES
T ss_pred             CEEEEEe--cCC---EEEEEEHhhCCCCCEEEECCCCcccccEEEEECceEeeecccCCccccEEeccCCcCCCceEecc
Confidence            9999883  377   78999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEEEEEecCccHHHHHHHHHHhhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchH
Q 003131          515 GVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHF  594 (845)
Q Consensus       515 g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~  594 (845)
                      |.++++|+++|.+|.+++|.+++++++.+|+|+|+.+|+++.+|+|+++++++++|++|++.+.            ...|
T Consensus       300 G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~------------~~~~  367 (736)
T 3rfu_A          300 GSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGP------------QPAL  367 (736)
T ss_dssp             CCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCS------------SSST
T ss_pred             ceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------CchH
Confidence            9999999999999999999999999999999999999999999999999999999999987641            1135


Q ss_pred             HHHHHHHhhhheeecccccchhhHHHHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCC
Q 003131          595 VFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKM  674 (845)
Q Consensus       595 ~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~  674 (845)
                      ..++.+++++++++|||+|++++|++++.++++++++|+++|+++++|.+|++|+||||||||||+|+|+|.++. .++.
T Consensus       368 ~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~-~~~~  446 (736)
T 3rfu_A          368 SYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIV-TDDF  446 (736)
T ss_dssp             THHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEE-ESSS
T ss_pred             HHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEE-ecCC
Confidence            678899999999999999999999999999999999999999999999999999999999999999999999998 5667


Q ss_pred             ChhhHHHHHhhhhccCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEEcCeEEE
Q 003131          675 DRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVL  754 (845)
Q Consensus       675 ~~~~~~~~~~~~~~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~g~~~~  754 (845)
                      +.++++.++++++..++||+++|++++++..+.                     ....+.+|++.+|+|+.+.++|..+.
T Consensus       447 ~~~~~l~~aa~le~~s~hPla~Aiv~~a~~~~~---------------------~~~~~~~f~~~~g~gv~~~~~g~~~~  505 (736)
T 3rfu_A          447 VEDNALALAAALEHQSEHPLANAIVHAAKEKGL---------------------SLGSVEAFEAPTGKGVVGQVDGHHVA  505 (736)
T ss_dssp             CHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTCC---------------------CCCCCSCCCCCTTTEEEECSSSSCEE
T ss_pred             CHHHHHHHHHHHhhcCCChHHHHHHHHHHhcCC---------------------CccCcccccccCCceEEEEECCEEEE
Confidence            888999999999999999999999999976631                     22345678889999999999999999


Q ss_pred             EeehhhhhhcCCCCChhhHHHHHHHHHccCeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHH
Q 003131          755 VGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTA  834 (845)
Q Consensus       755 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA  834 (845)
                      +|+++++.+.+.+.+ ++.+..+++..+|++++++++|++++|+++++|++|++++++|++||++|++++|+|||+..+|
T Consensus       506 ~G~~~~~~~~~~~~~-~~~~~~~~~~~~G~~vl~va~d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a  584 (736)
T 3rfu_A          506 IGNARLMQEHGGDNA-PLFEKADELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTA  584 (736)
T ss_dssp             EESHHHHHHHCCCCH-HHHHHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHH
T ss_pred             EcCHHHHHHcCCChh-HHHHHHHHHHhcCCeEEEEEECCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence            999999988876643 4566678899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCC
Q 003131          835 HAVAREVCVID  845 (845)
Q Consensus       835 ~~iA~~~GI~~  845 (845)
                      .++|+++||++
T Consensus       585 ~~ia~~lgi~~  595 (736)
T 3rfu_A          585 EAVAGTLGIKK  595 (736)
T ss_dssp             HHHHHHHTCCC
T ss_pred             HHHHHHcCCCE
Confidence            99999999963

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=100.00  E-value=1.1e-84  Score=759.89  Aligned_cols=491  Identities=40%  Similarity=0.644  Sum_probs=443.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccchhhHHHHhhhccCCCchHHHHHHHHHHHhhhccChHHHHHHHHHHHcCCCCchHHHH
Q 003131          291 FRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVA  370 (845)
Q Consensus       291 ~~~~~~a~ilal~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~~md~L~~  370 (845)
                      +++++.++++++|+++++|. ++              ++...|+++++++|++||+|+|||++||++++++++|||+|++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~-~~--------------~~~~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~~md~L~~   71 (645)
T 3j08_A            7 KRKLYVAAFAGVLLLFLAHF-IS--------------LPYEDFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVMYS   71 (645)
T ss_dssp             SSSSSSSSCSHHHHHHHTTT-CC--------------SCCCSSSCCCTHHHHHHHHHHHHHHHTCCTTTTCSGGGCCCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHH-hh--------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHH
Confidence            34566677888888776542 11              1223467788999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhcCCCCcchhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceee
Q 003131          371 LGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIE  450 (845)
Q Consensus       371 l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~  450 (845)
                      +|+.++|+||++.++....   ....||++++++++++++|+++|.++++|+++.+++|.++.|++++|+   |||   +
T Consensus        72 l~~~~a~~~s~~~~~~~~~---~~~~~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~---r~g---~  142 (645)
T 3j08_A           72 MGVGAAFLASVLSTAGVLP---REYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVI---RDG---K  142 (645)
T ss_dssp             CHHHHHHHHHHHHHHHHCC---SCSSCCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEE---ETT---E
T ss_pred             HHHHHHHHHHHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE---ECC---E
Confidence            9999999999998876421   122489999999999999999999999999999999999999999999   888   7


Q ss_pred             eEEeecCCcCCCCEEEEcCCCccCccEEEEecceeeeccccCCcceeeeccCCCceeccceeecceEEEEEEEecCccHH
Q 003131          451 EREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVL  530 (845)
Q Consensus       451 ~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G~~~Vdes~LTGEs~pv~k~~~~~v~aGt~~~~g~~~~~v~~~g~~t~~  530 (845)
                      +++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|++|+.+|+||++.+|.++++|+++|.+|.+
T Consensus       143 ~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l  222 (645)
T 3j08_A          143 EIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLL  222 (645)
T ss_dssp             EEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHH
T ss_pred             EEEEEHHHCCCCCEEEECCCCEEeeEEEEEECcEEEEcccccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCccHH
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecc
Q 003131          531 SQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACP  610 (845)
Q Consensus       531 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P  610 (845)
                      ++|.+++++++.+++|+|+.+|+++.+|+|++++++++++++|++...             .++..++.+++++++++||
T Consensus       223 ~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~-------------~~~~~~~~~~i~vlvia~P  289 (645)
T 3j08_A          223 AQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAH-------------APLLFAFTTLIAVLVVACP  289 (645)
T ss_dssp             HHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCS-------------CSCCCTTTTTHHHHHHHSC
T ss_pred             HHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------------CcHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999999887754321             1233456778999999999


Q ss_pred             cccchhhHHHHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCChhhHHHHHhhhhccC
Q 003131          611 CALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASS  690 (845)
Q Consensus       611 ~~L~la~p~~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~s  690 (845)
                      |+|++++|+++..++.+++|+|+++|+++++|.+|++|++|||||||||+|+|+|.+++..+ .+.++++.+++.++..+
T Consensus       290 ~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~-~~~~~~l~~aa~~e~~s  368 (645)
T 3j08_A          290 CAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLN-GDERELLRLAAIAERRS  368 (645)
T ss_dssp             TTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESS-SCHHHHHHHHHHHHTTC
T ss_pred             hHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCC-CCHHHHHHHHHHHhhcC
Confidence            99999999999999999999999999999999999999999999999999999999999874 57888999999999999


Q ss_pred             CChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEEcCeEEEEeehhhhhhcCCCCCh
Q 003131          691 EHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPD  770 (845)
Q Consensus       691 ~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~g~~~~~g~~~~~~~~~~~~~~  770 (845)
                      .||+++|++++++..+.                     ......++++.+|+|+.+    ..+.+|+++++.+.+...++
T Consensus       369 ~hPla~Aiv~~a~~~g~---------------------~~~~~~~~~~~~g~g~~~----~~v~~g~~~~~~~~~~~~~~  423 (645)
T 3j08_A          369 EHPIAEAIVKKALEHGI---------------------ELGEPEKVEVIAGEGVVA----DGILVGNKRLMEDFGVAVSN  423 (645)
T ss_dssp             CSHHHHHHHHHHHHTTC---------------------CCCSCCCCEEETTTEEEE----TTEEEECHHHHHHTTCCCCH
T ss_pred             CChhHHHHHHHHHhcCC---------------------CcCCccceEEecCCceEE----EEEEECCHHHHHhcCCCccH
Confidence            99999999999987632                     123345677888999877    67889999999998888888


Q ss_pred             hhHHHHHHHHHccCeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          771 HVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       771 ~~~~~~~~~~~~g~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      ++++..+++..+|++++++++|++++|+++++|++|++++++|++||++|++++|+|||+..+|.++|+++||+
T Consensus       424 ~~~~~~~~~~~~g~~~l~va~~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~  497 (645)
T 3j08_A          424 EVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD  497 (645)
T ss_dssp             HHHHHHHHHHTTTCCCEEEEETTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHHhcCCeEEEEEECCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence            88888889999999999999999999999999999999999999999999999999999999999999999985

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=100.00  E-value=4.2e-67  Score=625.30  Aligned_cols=414  Identities=19%  Similarity=0.313  Sum_probs=347.5

Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCc
Q 003131          396 TYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPA  475 (845)
Q Consensus       396 ~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPa  475 (845)
                      .|++ +++++++++++.+++.++++|+.+++++|.++.|.+++|+   |||   ++++|++++|+|||+|.|++||+|||
T Consensus       140 ~~~~-~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~---RdG---~~~~I~~~eLv~GDiV~l~~Gd~VPa  212 (920)
T 1mhs_A          140 DWVD-FGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVL---RDG---TLKEIEAPEVVPGDILQVEEGTIIPA  212 (920)
T ss_dssp             CSSH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEE---CSS---SEEECCTTTSCTTSEEEECTTCBCSS
T ss_pred             hHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEE---ECC---EEEEEEHHHcCCCCEEEeCCCCcccc
Confidence            3554 3456677788899999999999999999999999999999   888   67899999999999999999999999


Q ss_pred             cEEEEecce--eeeccccCCcceeeeccCCCceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCChhhHHHHH
Q 003131          476 DGIVVWGTS--YVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADF  553 (845)
Q Consensus       476 Dg~ll~G~~--~Vdes~LTGEs~pv~k~~~~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~  553 (845)
                      ||+|++|++  .||||+|||||.|+.|.+|+.+|+||.+.+|.++++|++||.+|.+|+|.+++++++.+++|+++.+++
T Consensus       213 Dg~ll~g~~~l~VDES~LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~  292 (920)
T 1mhs_A          213 DGRIVTDDAFLQVDQSALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNG  292 (920)
T ss_dssp             EEEEEEESSCCEEBCTTTSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHH
T ss_pred             ceEEEecCceeeeeccccCCCCcceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHH
Confidence            999999986  799999999999999999999999999999999999999999999999999999998899999999999


Q ss_pred             HhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHHHHHHhcCe
Q 003131          554 VASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGV  633 (845)
Q Consensus       554 ~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~~~~~gi  633 (845)
                      ++.+++++++++++++|+.|++.              ..++..++.+++++++++|||+|++++|++++.++.+|+|+|+
T Consensus       293 i~~~l~~~~~~~~~i~~~~~~~~--------------~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~i  358 (920)
T 1mhs_A          293 IGTILLILVIFTLLIVWVSSFYR--------------SNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKA  358 (920)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTT--------------TCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc--------------CCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCe
Confidence            99999988877776655433221              2357788999999999999999999999999999999999999


Q ss_pred             EEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCChhhHHHHHhh-hhccCC--ChhHHHHHHHHhhcCcCCC
Q 003131          634 LIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVAS-AEASSE--HPLAKAVVEYARHFHFFDD  710 (845)
Q Consensus       634 lvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~s~--~p~~~al~~~~~~~~~~~~  710 (845)
                      ++|+++++|.||++|+||||||||||+|+|+|.+++..++.+.++++..++. .+..+.  ||++.|+++++...+... 
T Consensus       359 lvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~-  437 (920)
T 1mhs_A          359 IVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAK-  437 (920)
T ss_dssp             CCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSSCC-
T ss_pred             EEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCCCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhcccch-
Confidence            9999999999999999999999999999999999877665555565544332 233455  999999999887653100 


Q ss_pred             CCCCCCCCCCccccCCCccccccccccccCCCceEEEEc---Ce--EEEEeehhhhhhcC---CCCCh----hhHHHHHH
Q 003131          711 PSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFIS---GK--QVLVGNRKLLNESG---ITIPD----HVESFVVE  778 (845)
Q Consensus       711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~---g~--~~~~g~~~~~~~~~---~~~~~----~~~~~~~~  778 (845)
                                  ............+|++. ++++.+.++   |.  .+.+|+++++.+..   .++++    .+.+..++
T Consensus       438 ------------~~~~~~~~~~~~pF~s~-~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~  504 (920)
T 1mhs_A          438 ------------SVLSKYKVLQFHPFDPV-SKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAE  504 (920)
T ss_dssp             ------------GGGSCCCEEEEEEEETT-TTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHH
T ss_pred             ------------hhccccceeEEeeccCC-CCeEEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHH
Confidence                        00001122334455544 667777773   54  35579999876532   22333    24456678


Q ss_pred             HHHccCeEEEEEECC-----eEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          779 LEESARTGILVAYDD-----NLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       779 ~~~~g~~~l~va~~~-----~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      ++.+|+|++++|++.     +|+|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||.
T Consensus       505 ~a~~G~RvL~vA~~~~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~  575 (920)
T 1mhs_A          505 FATRGFRSLGVARKRGEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLG  575 (920)
T ss_dssp             HHTSSCCCCEECCCSSSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSS
T ss_pred             HHhCCCEEEEEEEeccccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCC
Confidence            899999999999863     899999999999999999999999999999999999999999999999995

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=100.00  E-value=1.6e-61  Score=593.00  Aligned_cols=416  Identities=20%  Similarity=0.271  Sum_probs=338.2

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCcc
Q 003131          397 YFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPAD  476 (845)
Q Consensus       397 ~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaD  476 (845)
                      ++..+++++++++++..++.++++|+.+.+++|.++.|..++|+   |||   ++++|++++|+|||+|.|++||+||||
T Consensus       134 ~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~---Rdg---~~~~I~~~~Lv~GDiV~l~~Gd~IPaD  207 (1028)
T 2zxe_A          134 NLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVI---RDG---EKSTINAEFVVAGDLVEVKGGDRIPAD  207 (1028)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEE---ETT---EEEEEEGGGCCTTCEEEEETTCBCCSE
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEE---ECC---EEEEEEHHHCCcCCEEEECCCCEeece
Confidence            44456667777888999999999999999999999999999999   888   679999999999999999999999999


Q ss_pred             EEEEecc-eeeeccccCCcceeeeccCCC----------ceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCC
Q 003131          477 GIVVWGT-SYVNESMVTGEAVPVLKEINS----------PVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKA  545 (845)
Q Consensus       477 g~ll~G~-~~Vdes~LTGEs~pv~k~~~~----------~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~  545 (845)
                      |+|++|+ +.||||+|||||.|+.|.+++          .+|+||.+.+|.++++|++||.+|.+|+|.+++.+++.+++
T Consensus       208 ~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t  287 (1028)
T 2zxe_A          208 LRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRT  287 (1028)
T ss_dssp             EEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCCCC
T ss_pred             EEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccCCCCCCC
Confidence            9999996 579999999999999999886          49999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHH
Q 003131          546 PIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVAT  625 (845)
Q Consensus       546 ~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~  625 (845)
                      |+|+.+++++.+++++++++++++++++++.+              .+|..++.+++++++++|||+|++++|++++.+.
T Consensus       288 ~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~  353 (1028)
T 2zxe_A          288 PIAIEIEHFIHIITGVAVFLGVSFFILSLILG--------------YSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTA  353 (1028)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--------------CCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--------------CcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHH
Confidence            99999999999999999999888887755431              2467788899999999999999999999999999


Q ss_pred             HHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCC-----------------Ch--hhHHHHHhhh
Q 003131          626 GVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKM-----------------DR--GEFLTLVASA  686 (845)
Q Consensus       626 ~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~-----------------~~--~~~~~~~~~~  686 (845)
                      .+|+++|++||+++++|.||++|+||||||||||+|+|+|.+++..+..                 +.  .+++..++.+
T Consensus       354 ~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc  433 (1028)
T 2zxe_A          354 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALC  433 (1028)
T ss_dssp             HHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHS
T ss_pred             HHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999998764210                 11  1344444432


Q ss_pred             h------cc----------CCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEE--
Q 003131          687 E------AS----------SEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFI--  748 (845)
Q Consensus       687 ~------~~----------s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~--  748 (845)
                      .      ..          .++|++.|++++++..+..         ......   ........+|++..++.....-  
T Consensus       434 ~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~---------~~~~~~---~~~~~~~~pF~s~rk~msvi~~~~  501 (1028)
T 2zxe_A          434 NRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGS---------VQGMRD---RNPKIVEIPFNSTNKYQLSIHENE  501 (1028)
T ss_dssp             CCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSC---------HHHHHH---HSCEEEEECCCTTTCEEEEEEECS
T ss_pred             CCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCC---------HHHHHH---hCceEEEeccCcccceEEEEEecc
Confidence            1      11          2467788999998764210         000000   0111223355555444333322  


Q ss_pred             ---cCe--EEEEeehhhhhhc-------CC--CCC----hhhHHHHHHHHHccCeEEEEEE-------------------
Q 003131          749 ---SGK--QVLVGNRKLLNES-------GI--TIP----DHVESFVVELEESARTGILVAY-------------------  791 (845)
Q Consensus       749 ---~g~--~~~~g~~~~~~~~-------~~--~~~----~~~~~~~~~~~~~g~~~l~va~-------------------  791 (845)
                         +|.  .+..|+++.+.+.       |.  ++.    +.+.+..++++.+|+|++++|+                   
T Consensus       502 ~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~  581 (1028)
T 2zxe_A          502 KSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEP  581 (1028)
T ss_dssp             CTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTT
T ss_pred             CCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhh
Confidence               132  3456777654331       11  122    2345567788999999999986                   


Q ss_pred             -----CCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          792 -----DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       792 -----~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                           |++|+|+++++||+|++++++|++|+++||+++|+|||++.||.+||+++||.
T Consensus       582 ~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~  639 (1028)
T 2zxe_A          582 NFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGII  639 (1028)
T ss_dssp             CSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSS
T ss_pred             hhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCC
Confidence                 35899999999999999999999999999999999999999999999999996

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=100.00  E-value=8.6e-66  Score=615.03  Aligned_cols=411  Identities=18%  Similarity=0.279  Sum_probs=332.8

Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCc
Q 003131          396 TYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPA  475 (845)
Q Consensus       396 ~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPa  475 (845)
                      .|++. ++++++++++.+++.++++|+++++++|.++.|.+++|+   |||   ++++|++++|+|||+|.|++||+|||
T Consensus        92 ~~~~~-~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~---RdG---~~~~I~~~~Lv~GDiV~l~~Gd~IPa  164 (885)
T 3b8c_A           92 DWQDF-VGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVL---RDG---KWSEQEAAILVPGDIVSIKLGDIIPA  164 (885)
T ss_dssp             CCTTH-HHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCC---CSS---CSCCCCTTTTCTTSBCCCCSSCCCSS
T ss_pred             cHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEE---ECC---EEEEEEHHHCCCCCEEEECCCCEEee
Confidence            56654 466677788999999999999999999999999999998   888   56899999999999999999999999


Q ss_pred             cEEEEecce-eeeccccCCcceeeeccCCCceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCChhhHHHHHH
Q 003131          476 DGIVVWGTS-YVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFV  554 (845)
Q Consensus       476 Dg~ll~G~~-~Vdes~LTGEs~pv~k~~~~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~  554 (845)
                      ||+|++|++ .||||+|||||.|+.|++|+.+|+||.+.+|.++++|++||.+|.+|+|.+++++ +.+++|+|+.++++
T Consensus       165 Dg~ll~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i  243 (885)
T 3b8c_A          165 DARLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAI  243 (885)
T ss_dssp             CCCCCCSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHH
T ss_pred             ceEEEEcCcccccccccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhc-ccccChHHHHHHHH
Confidence            999999997 5999999999999999999999999999999999999999999999999988876 67899999999999


Q ss_pred             hhhHHHHH-HHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHHHHHHhcCe
Q 003131          555 ASIFVPIV-VTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGV  633 (845)
Q Consensus       555 ~~~~~~~~-~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~~~~~gi  633 (845)
                      ++++++.+ +.+++++++.|++.              ..+|..++.+++++++++|||+||+++|++++.+..+|+|+|+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~i  309 (885)
T 3b8c_A          244 GNFCICSIAIGMVIEIIVMYPIQ--------------RRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA  309 (885)
T ss_dssp             HHHHHHHHHHHHHHHSTTTTTTT--------------CSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHc--------------cCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCe
Confidence            98865433 32333333322211              1234457888999999999999999999999999999999999


Q ss_pred             EEecchHHHhhcCCcEEEecCCCccccCCeEEEEEE--ec-cCCChhhHHHHHhhhhcc-CCChhHHHHHHHHhhcCcCC
Q 003131          634 LIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAK--VF-TKMDRGEFLTLVASAEAS-SEHPLAKAVVEYARHFHFFD  709 (845)
Q Consensus       634 lvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~--~~-~~~~~~~~~~~~~~~~~~-s~~p~~~al~~~~~~~~~~~  709 (845)
                      ++|+++++|.||++|+||||||||||+|+|+|.+..  .+ .+.+.++++.+++.++.. ++||++.|+++++....   
T Consensus       310 lvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~~~---  386 (885)
T 3b8c_A          310 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPK---  386 (885)
T ss_dssp             CCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCCTT---
T ss_pred             EeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhchh---
Confidence            999999999999999999999999999999997432  22 234567888888877764 89999999998765310   


Q ss_pred             CCCCCCCCCCCccccCCCccccccccccccCCCceEEE--EcCe--EEEEeehhhhhhcC---CCCChhhHHHHHHHHHc
Q 003131          710 DPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCF--ISGK--QVLVGNRKLLNESG---ITIPDHVESFVVELEES  782 (845)
Q Consensus       710 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~--~~g~--~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~  782 (845)
                      .   ...          ........+|++..++.....  .+|.  .+.+|+++.+.+.+   ...++++.+..++++.+
T Consensus       387 ~---~~~----------~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~  453 (885)
T 3b8c_A          387 E---ARA----------GIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAER  453 (885)
T ss_dssp             C---CCC----------SSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTT
T ss_pred             h---Hhh----------cCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhC
Confidence            0   000          000111222332222211000  1333  34468888665432   23456677778889999


Q ss_pred             cCeEEEEEEC-------------CeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          783 ARTGILVAYD-------------DNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       783 g~~~l~va~~-------------~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      |+|++++|++             ++|+|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||.
T Consensus       454 G~rvl~vA~~~~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~  528 (885)
T 3b8c_A          454 GLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG  528 (885)
T ss_dssp             TCEEEEECCBCCCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCT
T ss_pred             CCeEEEEEEeccccccccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCc
Confidence            9999999985             5899999999999999999999999999999999999999999999999994

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=100.00  E-value=9.7e-60  Score=578.46  Aligned_cols=416  Identities=20%  Similarity=0.236  Sum_probs=335.7

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCcc
Q 003131          397 YFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPAD  476 (845)
Q Consensus       397 ~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaD  476 (845)
                      ++..+++++++++++..+..++++|+.+++++|.++.|.+++|+   |||   ++++|++++|+|||||.|++||+||||
T Consensus       139 ~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~Vi---RdG---~~~~I~~~eLv~GDiV~l~~Gd~VPAD  212 (1034)
T 3ixz_A          139 NLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVI---RDG---DKFQINADQLVVGDLVEMKGGDRVPAD  212 (1034)
T ss_pred             chhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEE---ECC---EEEEEEHHHCCCCcEEEEcCCceecCC
Confidence            44456677777888999999999999999999999999999999   888   779999999999999999999999999


Q ss_pred             EEEEecce-eeeccccCCcceeeeccCC----------CceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCC
Q 003131          477 GIVVWGTS-YVNESMVTGEAVPVLKEIN----------SPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKA  545 (845)
Q Consensus       477 g~ll~G~~-~Vdes~LTGEs~pv~k~~~----------~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~  545 (845)
                      |+|++|.. .||||+|||||.|+.|.++          +.+|+||.+.+|.++++|++||.+|.+|+|.+++.+.+.+++
T Consensus       213 ~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~t  292 (1034)
T 3ixz_A          213 IRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKT  292 (1034)
T ss_pred             eEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhcccccCCC
Confidence            99999986 5999999999999999765          458999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHH
Q 003131          546 PIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVAT  625 (845)
Q Consensus       546 ~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~  625 (845)
                      |+++.+++++.++.+++++++++.+++|++.+              .+|..++.+++++++++|||+|+++++++++.+.
T Consensus       293 pl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~  358 (1034)
T 3ixz_A          293 PIAIEIEHFVDIIAGLAILFGATFFIVAMCIG--------------YTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTA  358 (1034)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------chHHHHHHHHHHHHHheeccccHHHHHHHHHHHH
Confidence            99999999999999999888888887776542              3578889999999999999999999999999999


Q ss_pred             HHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCC-------------------hhhHHHHHhhh
Q 003131          626 GVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMD-------------------RGEFLTLVASA  686 (845)
Q Consensus       626 ~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------------------~~~~~~~~~~~  686 (845)
                      .+|+++|+++|+++++|.||++++||||||||||+|+|+|.+++..+...                   ...++..++.+
T Consensus       359 ~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc  438 (1034)
T 3ixz_A          359 KRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLC  438 (1034)
T ss_pred             HHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999987643210                   01333333322


Q ss_pred             hc----------------cCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEEc-
Q 003131          687 EA----------------SSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFIS-  749 (845)
Q Consensus       687 ~~----------------~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~-  749 (845)
                      ..                ..++|.+.|+++++...+.....      .   ..   ........+|++..++....... 
T Consensus       439 ~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~------~---~~---~~~~~~~~pF~s~rk~m~~v~~~~  506 (1034)
T 3ixz_A          439 NRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMG------Y---RE---RFPKVCEIPFNSTNKFQLSIHTLE  506 (1034)
T ss_pred             ccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHH------H---HH---hCcceEEeeecCCCceEEEEEEec
Confidence            11                13578999999988765310000      0   00   11112233454444432222211 


Q ss_pred             ----Ce--EEEEeehhhhhhc-------CCC--CC----hhhHHHHHHHHHccCeEEEEEE-------------------
Q 003131          750 ----GK--QVLVGNRKLLNES-------GIT--IP----DHVESFVVELEESARTGILVAY-------------------  791 (845)
Q Consensus       750 ----g~--~~~~g~~~~~~~~-------~~~--~~----~~~~~~~~~~~~~g~~~l~va~-------------------  791 (845)
                          |.  .+..|+++.+.+.       +..  ..    +.+.+...+++.+|+|++++|+                   
T Consensus       507 ~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~  586 (1034)
T 3ixz_A          507 DPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAM  586 (1034)
T ss_pred             CCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhh
Confidence                11  2334555543321       211  22    2245566788999999999886                   


Q ss_pred             -----CCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          792 -----DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       792 -----~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                           |++|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||.
T Consensus       587 ~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~  644 (1034)
T 3ixz_A          587 NFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGII  644 (1034)
T ss_pred             hccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence                 45799999999999999999999999999999999999999999999999995

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=100.00  E-value=1.3e-59  Score=576.78  Aligned_cols=438  Identities=19%  Similarity=0.258  Sum_probs=330.3

Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceee-eEEeecCCcCCCCEEEEcCCCccC
Q 003131          396 TYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIE-EREIDALLIQSGDTLKVLPGTKLP  474 (845)
Q Consensus       396 ~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~-~~~i~~~~l~~GDii~v~~G~~vP  474 (845)
                      .|++.. +++++++++..++.++++|+++++++|.++.|.+++|+   |||+  + .++|++++|+|||+|.|++||+||
T Consensus        88 ~~~~~~-~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~---R~g~--~~~~~I~~~~lv~GDiV~l~~Gd~IP  161 (995)
T 3ar4_A           88 AFVEPF-VILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVY---RADR--KSVQRIKARDIVPGDIVEVAVGDKVP  161 (995)
T ss_dssp             SSHHHH-HHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEE---BTTC--SSCEEEEGGGCCTTCEEEEETTCBCC
T ss_pred             hHHHhH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEE---eCCC--ceEEEEEHHHCCCCCEEEECCCCccc
Confidence            566644 44556677788888888889999999999999999999   7772  2 489999999999999999999999


Q ss_pred             ccEEEEecc---eeeeccccCCcceeeeccCC-------------CceeccceeecceEEEEEEEecCccHHHHHHHHHH
Q 003131          475 ADGIVVWGT---SYVNESMVTGEAVPVLKEIN-------------SPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVE  538 (845)
Q Consensus       475 aDg~ll~G~---~~Vdes~LTGEs~pv~k~~~-------------~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~  538 (845)
                      |||+|++|+   +.||||+|||||.|+.|+++             +.+|+||.+.+|.++++|++||.+|.+|+|.++++
T Consensus       162 aD~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~  241 (995)
T 3ar4_A          162 ADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMA  241 (995)
T ss_dssp             SEEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHH
T ss_pred             ccEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhh
Confidence            999997654   47999999999999999987             58999999999999999999999999999999999


Q ss_pred             hhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCC-CCCCcCCCCCchHHHHHHHHhhhheeecccccchhh
Q 003131          539 TAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGA-YPEQWLPENGTHFVFALMFSISVVVIACPCALGLAT  617 (845)
Q Consensus       539 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~  617 (845)
                      +++.+++|+|+.+++++.+++++++++++++|++|+.... .. ....|.    ..+...+..++++++++|||+|++++
T Consensus       242 ~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~ai~l~v~aiP~~Lp~~v  316 (995)
T 3ar4_A          242 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFN-DPVHGGSWI----RGAIYYFKIAVALAVAAIPEGLPAVI  316 (995)
T ss_dssp             TCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGG-SCSSSSCHH----HHHHHHHHHHHHHHHHHSCTTHHHHH
T ss_pred             cCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccccchHH----HHHHHHHHHHHHHHHHhcCcchHHHH
Confidence            9999999999999999999999988888877665432110 00 000111    12345677899999999999999999


Q ss_pred             HHHHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccC-----------------CCh----
Q 003131          618 PTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTK-----------------MDR----  676 (845)
Q Consensus       618 p~~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~-----------------~~~----  676 (845)
                      |++++.+..+|+++|+++|+++++|.||++|+||||||||||+|+|+|.+++..+.                 .++    
T Consensus       317 t~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  396 (995)
T 3ar4_A          317 TTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEV  396 (995)
T ss_dssp             HHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCE
T ss_pred             HHHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCcccc
Confidence            99999999999999999999999999999999999999999999999999875420                 000    


Q ss_pred             ---------------hhHHHHHhhhhc-------------cCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCcc----cc
Q 003131          677 ---------------GEFLTLVASAEA-------------SSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSK----ES  724 (845)
Q Consensus       677 ---------------~~~~~~~~~~~~-------------~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~----~~  724 (845)
                                     .+++...+.+..             ..++|.+.|++.++++.+..+.............    ..
T Consensus       397 ~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~  476 (995)
T 3ar4_A          397 LKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVI  476 (995)
T ss_dssp             EETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHH
T ss_pred             ccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhh
Confidence                           112222222111             1368999999999887654211100000000000    00


Q ss_pred             CCCccccccccccccCCCceEEEE--cC-------eEEEEeehhhhhhcC---------CCCC----hhhHHHHHHH--H
Q 003131          725 TGSGWLLDVSDFSALPGRGIQCFI--SG-------KQVLVGNRKLLNESG---------ITIP----DHVESFVVEL--E  780 (845)
Q Consensus       725 ~~~~~~~~~~~~~~~~g~gi~~~~--~g-------~~~~~g~~~~~~~~~---------~~~~----~~~~~~~~~~--~  780 (845)
                      ..........+|++..++.-....  +|       ..+..|+++.+.+.+         .+.+    +.+.+..+++  +
T Consensus       477 ~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a  556 (995)
T 3ar4_A          477 RQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTG  556 (995)
T ss_dssp             HHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHS
T ss_pred             hhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhh
Confidence            001112233455554433211111  22       244567766543321         1122    1244556677  8


Q ss_pred             HccCeEEEEEE-----------------------CCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHH
Q 003131          781 ESARTGILVAY-----------------------DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAV  837 (845)
Q Consensus       781 ~~g~~~l~va~-----------------------~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~i  837 (845)
                      .+|+|++++||                       |++|+|+++++|++|++++++|++||++||+++|+|||++.||.++
T Consensus       557 ~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~i  636 (995)
T 3ar4_A          557 RDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAI  636 (995)
T ss_dssp             TTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred             hccceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHH
Confidence            89999999986                       3479999999999999999999999999999999999999999999


Q ss_pred             HHHcCCC
Q 003131          838 AREVCVI  844 (845)
Q Consensus       838 A~~~GI~  844 (845)
                      |+++||.
T Consensus       637 a~~lgi~  643 (995)
T 3ar4_A          637 CRRIGIF  643 (995)
T ss_dssp             HHHHTSS
T ss_pred             HHHcCcC
Confidence            9999995

>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F

Probab=99.95  E-value=2.7e-28  Score=215.79  Aligned_cols=111  Identities=50%  Similarity=0.766  Sum_probs=106.2

Q ss_pred             HHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEecceeeeccccCCcceeeeccCCC
Q 003131          425 AIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINS  504 (845)
Q Consensus       425 ~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G~~~Vdes~LTGEs~pv~k~~~~  504 (845)
                      ++++|.++.|..++++   |||   ++++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|.+|+
T Consensus         2 al~~L~~l~p~~a~v~---r~g---~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~~~vdeS~LTGEs~pv~k~~g~   75 (113)
T 2hc8_A            2 AIKKLVGLQAKTAVVI---RDG---KEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGD   75 (113)
T ss_dssp             HHHHHHHHSCSEEEEE---ETT---EEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTC
T ss_pred             HHHHHhcCCCCEEEEE---ECC---EEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEceEEEEccccCCCCccEEECCCC
Confidence            5678888999999999   788   6789999999999999999999999999999999999999999999999999999


Q ss_pred             ceeccceeecceEEEEEEEecCccHHHHHHHHHHhhh
Q 003131          505 PVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQ  541 (845)
Q Consensus       505 ~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~  541 (845)
                      .+|+||++.+|.++++|+++|.+|.+++|.+++++++
T Consensus        76 ~v~aGt~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a~  112 (113)
T 2hc8_A           76 EVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAM  112 (113)
T ss_dssp             EECTTCEECSSCEEEEEEECGGGSHHHHHHHHHHHHH
T ss_pred             EEEeCCEEeeceEEEEEEEecCcCHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999998875

>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}

Probab=99.95  E-value=3.2e-28  Score=219.45  Aligned_cols=123  Identities=47%  Similarity=0.675  Sum_probs=107.8

Q ss_pred             hhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEecceeeeccccCCcceee
Q 003131          419 KGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPV  498 (845)
Q Consensus       419 ~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G~~~Vdes~LTGEs~pv  498 (845)
                      ++|+.+++++|.++.|..+++++.++++....+++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+
T Consensus         2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~~vdeS~LTGEs~pv   81 (124)
T 2kij_A            2 SFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHSMVDESLITGEAMPV   81 (124)
T ss_dssp             ----CCHHHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCCEEECTTTTCCSSCE
T ss_pred             hHHHHHHHHHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccEEEEeccccCCCccE
Confidence            45788899999999999999994322332112578999999999999999999999999999999999999999999999


Q ss_pred             eccCCCceeccceeecceEEEEEEEecCccHHHHHHHHHHhhh
Q 003131          499 LKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQ  541 (845)
Q Consensus       499 ~k~~~~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~  541 (845)
                      .|.+|+.+|+||++.+|.+.++|+++|.+|.+++|.+++++++
T Consensus        82 ~k~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a~  124 (124)
T 2kij_A           82 AKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEAQ  124 (124)
T ss_dssp             ECCTTEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTTC
T ss_pred             EeCCCCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhhC
Confidence            9999999999999999999999999999999999999987653

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=99.82  E-value=6.1e-25  Score=229.37  Aligned_cols=173  Identities=29%  Similarity=0.425  Sum_probs=151.4

Q ss_pred             HHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCChhhHHHHHhhhhccCCChhHHHHHHHH
Q 003131          623 VATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYA  702 (845)
Q Consensus       623 ~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~s~~p~~~al~~~~  702 (845)
                      .++++++|+||++|+++++|.++++++||||||||||+|+|.+.++.     +.++++.++++++..|.||+++|+.+++
T Consensus         4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~-----~~~~~l~~~~~~e~~s~hp~a~ai~~~~   78 (263)
T 2yj3_A            4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI-----GDSLSLAYAASVEALSSHPIAKAIVKYA   78 (263)
Confidence            56788999999999999999999999999999999999999999875     4567899999999999999999999887


Q ss_pred             hhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEEcCeEEEEeehhhhhhcCCCCChhhHHHHHHHHHc
Q 003131          703 RHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEES  782 (845)
Q Consensus       703 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  782 (845)
                      +..+.                     ......++...+|.|+...+++..+.+|++.                      +
T Consensus        79 ~~~g~---------------------~~~~~~~~~~~~G~g~~~~~~~~~~~~G~~~----------------------~  115 (263)
T 2yj3_A           79 KEQGV---------------------KILEVKDFKEISGIGVRGKISDKIIEVKKAE----------------------N  115 (263)
Confidence            65421                     1234456788889999998888877777643                      2


Q ss_pred             cCeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          783 ARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       783 g~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +.+ ++++++..+.|.+.+.|+++|+++++|+.|++.|+++.|+|||+..++..+++++||.
T Consensus       116 ~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~  176 (263)
T 2yj3_A          116 NND-IAVYINGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ  176 (263)
Confidence            345 7788899999999999999999999999999999999999999999999999999985

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=99.87  E-value=3.9e-21  Score=203.63  Aligned_cols=196  Identities=39%  Similarity=0.621  Sum_probs=165.7

Q ss_pred             HHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCChhhHHHHHhhhhccCCChhHHHHHHHH
Q 003131          623 VATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYA  702 (845)
Q Consensus       623 ~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~s~~p~~~al~~~~  702 (845)
                      .+.++++|+||++|+++++|.++++++|+||||||||.+.+.+.+++..++ +.++++.++++++..+.||++.|+.+++
T Consensus         8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~-~~~~~l~~~~~~e~~s~hp~~~a~~~~~   86 (287)
T 3a1c_A            8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG-DERELLRLAAIAERRSEHPIAEAIVKKA   86 (287)
T ss_dssp             ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS-CHHHHHHHHHHHTTTCCSHHHHHHHHHH
T ss_pred             hhHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC-CHHHHHHHHHHHhhcCCCHHHHHHHHHH
Confidence            356789999999999999999999999999999999999999999988877 8889999999999999999999999998


Q ss_pred             hhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEEcCeEEEEeehhhhhhcCCCCChhhHHHHHHHHHc
Q 003131          703 RHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEES  782 (845)
Q Consensus       703 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  782 (845)
                      +..+.                     .......+....|.|+..    ..+.+|+..++...+.+.|+.+++....+..+
T Consensus        87 ~~~g~---------------------~~~~~~~~~~~~G~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (287)
T 3a1c_A           87 LEHGI---------------------ELGEPEKVEVIAGEGVVA----DGILVGNKRLMEDFGVAVSNEVELALEKLERE  141 (287)
T ss_dssp             HHTTC---------------------CCCCCSCEEEETTTEEEE----TTEEEECHHHHHHTTCCCCHHHHHHHHHHHHT
T ss_pred             HhcCC---------------------CccccccceeecCCCeEE----EEEEECCHHHHHhcCCCccHHHHHHHHHHHhC
Confidence            77642                     011223455667887766    45666887777766666655666777788889


Q ss_pred             cCeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          783 ARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       783 g~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      |.+++++++|+.+++.+...++++|++.++++.|++.|+++.++||++...+..+.+.+||.
T Consensus       142 g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~  203 (287)
T 3a1c_A          142 AKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD  203 (287)
T ss_dssp             TCEEEEEEETTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS
T ss_pred             CCeEEEEEECCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc
Confidence            99999999999999999999999999999999999999999999999999999999999985

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=99.82  E-value=9.3e-20  Score=172.84  Aligned_cols=145  Identities=38%  Similarity=0.631  Sum_probs=128.3

Q ss_pred             ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhhcccCCCCCCC
Q 003131           45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGPKP  124 (845)
Q Consensus        45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~~~  124 (845)
                      |.+..|.|+||+|++|+..+++.+.+++||..+.+++.++++.+.+++...+.+++.+.+++.||.+......      .
T Consensus         3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~------~   76 (149)
T 2ew9_A            3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVMEDY------A   76 (149)
T ss_dssp             CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECSCS------C
T ss_pred             cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeeccc------c
Confidence            5677899999999999999999999999999999999999999999876677889999999999987543210      0


Q ss_pred             CceeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          125 QGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       125 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      ....+..+.|+||+|++|+++|+++|.+++||.++.+|+.++++.|.|++..++.++|.+.|+++||++.+
T Consensus        77 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  147 (149)
T 2ew9_A           77 GSDGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASL  147 (149)
T ss_dssp             CSSSEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEEC
T ss_pred             cccceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEe
Confidence            11235679999999999999999999999999999999999999999999888999999999999998764

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=99.80  E-value=1.3e-18  Score=165.29  Aligned_cols=139  Identities=35%  Similarity=0.608  Sum_probs=126.2

Q ss_pred             ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhhcccCCCCCCC
Q 003131           45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGPKP  124 (845)
Q Consensus        45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~~~  124 (845)
                      +++..|.|+||+|++|+..+++.+.+++||..+.+++..+++.+.+++...+.+++.+.+++.||.+.            
T Consensus         5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~------------   72 (151)
T 1p6t_A            5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVV------------   72 (151)
T ss_dssp             CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEEC------------
T ss_pred             ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCccc------------
Confidence            35667999999999999999999999999999999999999999887666678889999999999752            


Q ss_pred             CceeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeec
Q 003131          125 QGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQ  197 (845)
Q Consensus       125 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~  197 (845)
                        ..+..+.|+||+|++|+++|++.|.+++||.++.+|+.++++.|.|+|..++.++|.+.|+++||.+.+..
T Consensus        73 --~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~  143 (151)
T 1p6t_A           73 --TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG  143 (151)
T ss_dssp             --CEEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESC
T ss_pred             --ccccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcC
Confidence              13467999999999999999999999999999999999999999999988899999999999999987644

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=99.79  E-value=1.5e-18  Score=164.45  Aligned_cols=141  Identities=33%  Similarity=0.515  Sum_probs=128.3

Q ss_pred             eeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeecc--CCcceeE
Q 003131          128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQS--SGQDKIL  205 (845)
Q Consensus       128 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~--~~~~~~~  205 (845)
                      .+..+.|+||+|++|+.++++.|.+++||.++.+|+.++++.+.|++...+.+++.+.+++.||.+.....  ....+..
T Consensus         4 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~~~~~~~~~   83 (149)
T 2ew9_A            4 QKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVMEDYAGSDGNIE   83 (149)
T ss_dssp             EEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECSCSCCSSSEEE
T ss_pred             EEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeecccccccceeE
Confidence            45678999999999999999999999999999999999999999998878889999999999999875432  1235678


Q ss_pred             EEEecccchhhhHHHHhhhccCCCceEEEeecCCCeEEEEeCCCCCChhhHHHhhhhcCCCcceEe
Q 003131          206 LQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIR  271 (845)
Q Consensus       206 ~~v~gm~c~~c~~~ie~~l~~~~gV~~~~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~  271 (845)
                      |.|.||+|++|+..+++.|++++||.++.+|+.++.+.|+|+|..++.+++.+.|++.|   |.+.
T Consensus        84 ~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G---y~~~  146 (149)
T 2ew9_A           84 LTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIG---FHAS  146 (149)
T ss_dssp             EEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHT---CEEE
T ss_pred             EEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCC---CceE
Confidence            99999999999999999999999999999999999999999999899999999999999   7654

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=99.75  E-value=9.6e-18  Score=167.58  Aligned_cols=154  Identities=34%  Similarity=0.562  Sum_probs=125.9

Q ss_pred             CceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcC---cchhhhcccC--
Q 003131           44 GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAG---FEAEILAESS--  118 (845)
Q Consensus        44 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G---y~~~~~~~~~--  118 (845)
                      .+.+..|.|+||+|++|++.|++++.+++||..+.+++..+++.+.+++...+.+++.+++++.|   |.+.......  
T Consensus        18 ~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~~gg~~v~~~~~~~~~   97 (202)
T 2rop_A           18 HVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVSLPDGAEGS   97 (202)
T ss_dssp             --CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSSSSCSEEEC-------
T ss_pred             ccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhccCCeEEEeccccccc
Confidence            34667899999999999999999999999999999999999999999877778889999999883   6553211000  


Q ss_pred             --------------C-CCCCCCceeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHH
Q 003131          119 --------------T-SGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIA  183 (845)
Q Consensus       119 --------------~-~~~~~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~  183 (845)
                                    . .........+..+.|+||+|++|+.+|+++|.+++||.++.+|+.++++.|.|++..++.++|.
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~  177 (202)
T 2rop_A           98 GTDHRSSSSHSPGSPPRNQVQGTCSTTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELR  177 (202)
T ss_dssp             ----------------------CCEEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHH
T ss_pred             cccccccccccccccccccccccceEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHH
Confidence                          0 0000011245789999999999999999999999999999999999999999999888999999


Q ss_pred             HHHHhcCCceeeec
Q 003131          184 NAIEDAGFEASFVQ  197 (845)
Q Consensus       184 ~~i~~~G~~~~~~~  197 (845)
                      +.|+++||.+....
T Consensus       178 ~~i~~~Gy~~~~~~  191 (202)
T 2rop_A          178 AAIEDMGFEASVVS  191 (202)
T ss_dssp             HHHHHHTSCEEEC-
T ss_pred             HHHHHcCCceEEcC
Confidence            99999999987643

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=99.75  E-value=1.1e-17  Score=158.75  Aligned_cols=138  Identities=27%  Similarity=0.447  Sum_probs=126.7

Q ss_pred             eeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeeccCCcceeEEE
Q 003131          128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQ  207 (845)
Q Consensus       128 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~~~~~~~~~  207 (845)
                      .+..+.|+||+|++|+.++++.+.+++||.++.+++.++++.+.|++...+.+++.+.+++.||.+.      ..++.|.
T Consensus         6 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~------~~~~~~~   79 (151)
T 1p6t_A            6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVV------TEKAEFD   79 (151)
T ss_dssp             EEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEEC------CEEEEEE
T ss_pred             eEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCccc------ccccEEE
Confidence            3457899999999999999999999999999999999999999999877788899999999999763      2467899


Q ss_pred             EecccchhhhHHHHhhhccCCCceEEEeecCCCeEEEEeCCCCCChhhHHHhhhhcCCCcceEeecC
Q 003131          208 VTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMN  274 (845)
Q Consensus       208 v~gm~c~~c~~~ie~~l~~~~gV~~~~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~~~~  274 (845)
                      |.||+|++|+..+++.|.+++||.++.+|+.++++.|+|+|..++.+++.+.|++.|   |.+....
T Consensus        80 v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G---y~~~~~~  143 (151)
T 1p6t_A           80 IEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLG---YKLKLKG  143 (151)
T ss_dssp             ESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHT---CCEEESC
T ss_pred             ecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcC---CCeEEcC
Confidence            999999999999999999999999999999999999999999999999999999999   8766543

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.75  E-value=3.6e-17  Score=172.42  Aligned_cols=184  Identities=36%  Similarity=0.574  Sum_probs=160.3

Q ss_pred             EecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCChhhHHHHHhhhhccCCChhHHHHHHHHhhcCcCCCCCCC
Q 003131          635 IKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLN  714 (845)
Q Consensus       635 vk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~s~~p~~~al~~~~~~~~~~~~~~~~  714 (845)
                      +|+++++|.+++++.|+||++||||.|++.|.++..+++ +.++++.++++++..+.||+..++.+++...+.       
T Consensus         1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~a~~~~~~~~g~-------   72 (280)
T 3skx_A            1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH-SEDELLQIAASLEARSEHPIAAAIVEEAEKRGF-------   72 (280)
T ss_dssp             ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS-CHHHHHHHHHHHHTTCCSHHHHHHHHHHHHTTC-------
T ss_pred             CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC-CHHHHHHHHHHhhccCCCHHHHHHHHHHHhcCC-------
Confidence            589999999999999999999999999999999999887 889999999999999999999999999887632       


Q ss_pred             CCCCCCccccCCCccccccccccccCCCceEEEEcCeEEEEeehhhhhhcCCCCChhhHHHHHHHHHccCeEEEEEECCe
Q 003131          715 PDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDN  794 (845)
Q Consensus       715 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~  794 (845)
                                    .......+....|.|+...++|..+..|+..++...+...+..    ..++...+.+.+++++++.
T Consensus        73 --------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  134 (280)
T 3skx_A           73 --------------GLTEVEEFRAIPGKGVEGIVNGRRYMVVSPGYIRELGIKTDES----VEKLKQQGKTVVFILKNGE  134 (280)
T ss_dssp             --------------CCCCCEEEEEETTTEEEEEETTEEEEEECHHHHHHTTCCCCTT----HHHHHTTTCEEEEEEETTE
T ss_pred             --------------CCCCccceeecCCCEEEEEECCEEEEEecHHHHHHcCCCchHH----HHHHHhCCCeEEEEEECCE
Confidence                          1123345677789999999999999999999988877665532    3456778889999999999


Q ss_pred             EEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          795 LIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       795 ~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      ++|.+.+.|+++|++.++++.|++.|+++.|+||++...+..+.+++|+.
T Consensus       135 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~  184 (280)
T 3skx_A          135 VSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD  184 (280)
T ss_dssp             EEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS
T ss_pred             EEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh
Confidence            99999999999999999999999999999999999999999999999985

>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*

Probab=99.71  E-value=1.1e-16  Score=149.77  Aligned_cols=136  Identities=18%  Similarity=0.254  Sum_probs=109.4

Q ss_pred             CCCccccCCeEEEEEEeccCCChhhHHHHHhhhhccCCChhHHHHHHHHhhc-CcCCCCCCCCCCCCCccccCCCcc--c
Q 003131          654 KTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHF-HFFDDPSLNPDGQSHSKESTGSGW--L  730 (845)
Q Consensus       654 KTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~s~~p~~~al~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~  730 (845)
                      ..||+|-|++.++++.+.++.++++++.+++++|..|+||+++||+++++.. +....                ...  .
T Consensus        13 ~~~tit~gnr~vt~v~~~~g~~e~elL~lAAs~E~~SeHPla~AIv~~A~~~~~l~~~----------------~~~~~~   76 (156)
T 1svj_A           13 SSGHGGRHNRQASEFIPAQGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRER----------------DVQSLH   76 (156)
T ss_dssp             --------CEEEEEEEECTTSCHHHHHHHHHHTTSSCCSHHHHHHHHHHHHHTTCCCC----------------CHHHHT
T ss_pred             CCCceecCCCeEEEEEecCCCCHHHHHHHHHHHhCcCCCHHHHHHHHHHHHhcCCCcc----------------cccccc
Confidence            4799999999999999988889999999999999999999999999999875 31000                000  1


Q ss_pred             cccccccccCC-CceEEEEcCeEEEEee----hhhhhhcCCCCChhhHHHHHHHHHccCeEEEEEECCeEEEEEEeeCCC
Q 003131          731 LDVSDFSALPG-RGIQCFISGKQVLVGN----RKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPV  805 (845)
Q Consensus       731 ~~~~~~~~~~g-~gi~~~~~g~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~lG~~~~~D~l  805 (845)
                      .++.+|+..+| +|+  .++|..+.+|+    .+|+.+.++.+|+++++..++++.+|+++++|+.|++++|+|++.|++
T Consensus        77 ~~~~~F~a~~G~~Gv--~v~G~~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d~~l~GvIalaD~i  154 (156)
T 1svj_A           77 ATFVPFTAQSRMSGI--NIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIV  154 (156)
T ss_dssp             CEEEEEETTTTEEEE--EETTEEEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETTEEEEEEEEEECC
T ss_pred             cceeeccccCCCCeE--EECCEEEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEECCEEEEEEEEecCC
Confidence            23468899999 899  45999999999    678888899888778888889999999999999999999999999999


Q ss_pred             Ch
Q 003131          806 KR  807 (845)
Q Consensus       806 r~  807 (845)
                      ||
T Consensus       155 K~  156 (156)
T 1svj_A          155 KG  156 (156)
T ss_dssp             CC
T ss_pred             CC
Confidence            96

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=99.70  E-value=1.4e-16  Score=159.09  Aligned_cols=144  Identities=29%  Similarity=0.523  Sum_probs=125.7

Q ss_pred             eeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhc---CCceeeecc-----
Q 003131          127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDA---GFEASFVQS-----  198 (845)
Q Consensus       127 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~---G~~~~~~~~-----  198 (845)
                      ..+..+.|+||+|++|+.+|++.|.+++||.++.+++.++++.|.|++...+.++|.+.++++   ||.+.....     
T Consensus        19 ~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~~gg~~v~~~~~~~~~~   98 (202)
T 2rop_A           19 VVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVSLPDGAEGSG   98 (202)
T ss_dssp             -CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSSSSCSEEEC--------
T ss_pred             cEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhccCCeEEEecccccccc
Confidence            345679999999999999999999999999999999999999999999888899999999998   366532110     


Q ss_pred             --------------------CCcceeEEEEecccchhhhHHHHhhhccCCCceEEEeecCCCeEEEEeCCCCCChhhHHH
Q 003131          199 --------------------SGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVD  258 (845)
Q Consensus       199 --------------------~~~~~~~~~v~gm~c~~c~~~ie~~l~~~~gV~~~~v~~~~~~~~V~~d~~~~~~~~i~~  258 (845)
                                          ....+..|.|.||+|+.|+..|++.|..++||.++.+|+.++.+.|.|+|..++.+++.+
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~  178 (202)
T 2rop_A           99 TDHRSSSSHSPGSPPRNQVQGTCSTTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRA  178 (202)
T ss_dssp             ---------------------CCEEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHH
T ss_pred             ccccccccccccccccccccccceEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHH
Confidence                                011457899999999999999999999999999999999999999999998899999999


Q ss_pred             hhhhcCCCcceEeec
Q 003131          259 GIAGRSNGKFQIRVM  273 (845)
Q Consensus       259 ~i~~~g~~~~~~~~~  273 (845)
                      .|++.|   |.+...
T Consensus       179 ~i~~~G---y~~~~~  190 (202)
T 2rop_A          179 AIEDMG---FEASVV  190 (202)
T ss_dssp             HHHHHT---SCEEEC
T ss_pred             HHHHcC---CceEEc
Confidence            999999   876554

>2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A*

Probab=99.70  E-value=3.7e-16  Score=151.16  Aligned_cols=129  Identities=36%  Similarity=0.632  Sum_probs=112.6

Q ss_pred             CccccCCeEEEEEEecc---CCChhhHHHHHhhhhccCCChhHHHHHHHHhhc-CcCCCCCCCCCCCCCccccCCCcccc
Q 003131          656 GTLTQGRATVTTAKVFT---KMDRGEFLTLVASAEASSEHPLAKAVVEYARHF-HFFDDPSLNPDGQSHSKESTGSGWLL  731 (845)
Q Consensus       656 GTLT~~~~~v~~~~~~~---~~~~~~~~~~~~~~~~~s~~p~~~al~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  731 (845)
                      ||||+|+|.|.++..+.   .++.++++.+++++|..|+||+++||+++++.. +.                    ....
T Consensus         1 GTLT~G~p~V~~v~~~~~~~~~~~~~lL~laaa~E~~SeHPlA~AIv~~a~~~~~~--------------------~~~~   60 (185)
T 2kmv_A            1 SFTMHGTPVVNQVKVLTESNRISHHKILAIVGTAESNSEHPLGTAITKYCKQELDT--------------------ETLG   60 (185)
T ss_dssp             CCCCSCCCEEEEEEECSCTTTSCHHHHHHHHHHGGGSSSCHHHHHHHHHHHHHHTC--------------------SCCC
T ss_pred             CCCcCCcEEEEEEEecCCcCCCCHHHHHHHHHHHHccCCCHHHHHHHHHHHhhcCC--------------------CCCC
Confidence            89999999999998874   357788999999999999999999999998753 10                    0123


Q ss_pred             ccccccccCCCceEEEEcC----------------------------------------------------eEEEEeehh
Q 003131          732 DVSDFSALPGRGIQCFISG----------------------------------------------------KQVLVGNRK  759 (845)
Q Consensus       732 ~~~~~~~~~g~gi~~~~~g----------------------------------------------------~~~~~g~~~  759 (845)
                      .+.+|+..+|+|+++.++|                                                    .++++|+++
T Consensus        61 ~~~~f~~i~G~Gv~~~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~  140 (185)
T 2kmv_A           61 TCIDFQVVPGCGISCKVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNRE  140 (185)
T ss_dssp             CCBCCEEETTTEEEEEECCSGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHH
T ss_pred             CccceEEeccceEEEEECCccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHH
Confidence            4678999999999999998                                                    589999999


Q ss_pred             hhhhcCCCCChhhHHHHHHHHHccCeEEEEEECCeEEEEEEeeCC
Q 003131          760 LLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADP  804 (845)
Q Consensus       760 ~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~lG~~~~~D~  804 (845)
                      |+.++++.+++.....+.+++.+|.++++++.|++++|+|++.|+
T Consensus       141 ~m~~~gi~i~~~~~~~~~~~~~~G~T~V~vaidg~l~g~iavaD~  185 (185)
T 2kmv_A          141 WMIRNGLVINNDVNDFMTEHERKGRTAVLVAVDDELCGLIAIADT  185 (185)
T ss_dssp             HHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETTEEEEEEEEECC
T ss_pred             HHHHcCCCCCHHHHHHHHHHHhCCCeEEEEEECCEEEEEEEEEcC
Confidence            999999988877777778888999999999999999999999995

>2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A

Probab=99.58  E-value=1.5e-14  Score=137.98  Aligned_cols=126  Identities=37%  Similarity=0.524  Sum_probs=108.4

Q ss_pred             cccCCeEEEEEEeccC---CChhhHHHHHhhhhccCCChhHHHHHHHHhhc-CcCCCCCCCCCCCCCccccCCCcccccc
Q 003131          658 LTQGRATVTTAKVFTK---MDRGEFLTLVASAEASSEHPLAKAVVEYARHF-HFFDDPSLNPDGQSHSKESTGSGWLLDV  733 (845)
Q Consensus       658 LT~~~~~v~~~~~~~~---~~~~~~~~~~~~~~~~s~~p~~~al~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (845)
                      ||+|+|.|.++..+.+   .+.++++.+++++|..|+||+++||+++++.. +.                    .....+
T Consensus         1 LT~G~p~V~~v~~~~~~~~~~~~~lL~laaslE~~SeHPlA~AIv~~a~~~~~~--------------------~~~~~~   60 (165)
T 2arf_A            1 AGHMVPRVMRVLLLGDVATLPLRKVLAVVGTAEASSEHPLGVAVTKYCKEELGT--------------------ETLGYC   60 (165)
T ss_dssp             CCCCCCCEEEEEECCCTTTSCHHHHHHHHHHHHTTSCSTTHHHHHHHHHHHHTC--------------------CCCCCE
T ss_pred             CCCceeEEEEEEeeCCcCCCCHHHHHHHHHHHHccCCChHHHHHHHHHHHhcCC--------------------CCCCCc
Confidence            8999999999987653   46788999999999999999999999998654 10                    001346


Q ss_pred             ccccccCCCceEEEEcCe-----------------------------------EEEEeehhhhhhcCCCCChhhHHHHHH
Q 003131          734 SDFSALPGRGIQCFISGK-----------------------------------QVLVGNRKLLNESGITIPDHVESFVVE  778 (845)
Q Consensus       734 ~~~~~~~g~gi~~~~~g~-----------------------------------~~~~g~~~~~~~~~~~~~~~~~~~~~~  778 (845)
                      .+|+.++|+|+++.++|.                                   ++++|+++|+.++++.+++.....+..
T Consensus        61 ~~f~~i~G~Gv~a~v~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~~~~~~~~~~~~  140 (165)
T 2arf_A           61 TDFQAVPGCGIGCKVSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGLTISSDVSDAMTD  140 (165)
T ss_dssp             EEEEEETTTEEEEEEECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHCSSCHHHHHHHHH
T ss_pred             CceEEecCccEEEEEcCcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCCCCCHHHHHHHHH
Confidence            789999999999999986                                   899999999999888887766666777


Q ss_pred             HHHccCeEEEEEECCeEEEEEEeeC
Q 003131          779 LEESARTGILVAYDDNLIGVMGIAD  803 (845)
Q Consensus       779 ~~~~g~~~l~va~~~~~lG~~~~~D  803 (845)
                      ++.+|.++++++.|++++|+|++.|
T Consensus       141 ~~~~G~T~v~va~dg~~~g~i~l~D  165 (165)
T 2arf_A          141 HEMKGQTAILVAIDGVLCGMIAIAD  165 (165)
T ss_dssp             HHTTTSEEEEEEETTEEEEEEEECC
T ss_pred             HHhCCCeEEEEEECCEEEEEEEEEC
Confidence            8889999999999999999999988

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0

Probab=99.19  E-value=4.7e-11  Score=97.53  Aligned_cols=68  Identities=47%  Similarity=0.730  Sum_probs=64.5

Q ss_pred             eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeee
Q 003131          129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFV  196 (845)
Q Consensus       129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~  196 (845)
                      +..+.|+||+|++|+.+|+++|++++||.++.+|+.++++.|.|++..++.++|.+.|+++||++.+.
T Consensus         3 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~   70 (74)
T 3dxs_X            3 KIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEIL   70 (74)
T ss_dssp             EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEE
T ss_pred             EEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEc
Confidence            46789999999999999999999999999999999999999999998889999999999999998764

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0

Probab=99.15  E-value=1.1e-10  Score=95.25  Aligned_cols=70  Identities=84%  Similarity=1.210  Sum_probs=65.1

Q ss_pred             ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhh
Q 003131           45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEIL  114 (845)
Q Consensus        45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~  114 (845)
                      |.+..|.|+||+|++|+..|++++++++||.++.+|+.++++.+.+++...+.+++.+++++.||.+++.
T Consensus         1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~   70 (74)
T 3dxs_X            1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEIL   70 (74)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEE
T ss_pred             CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEc
Confidence            4567899999999999999999999999999999999999999999887789999999999999998654

>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A

Probab=99.12  E-value=1.5e-10  Score=93.01  Aligned_cols=66  Identities=27%  Similarity=0.516  Sum_probs=62.0

Q ss_pred             eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      +..+.|+||+|++|+.+|+++|++++||.++.+|+.++++.|.| +...++++|.+.|++.||++.+
T Consensus         3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~-~~~~~~~~i~~~i~~~Gy~~~~   68 (69)
T 4a4j_A            3 TINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSY-HGETTPQILTDAVERAGYHARV   68 (69)
T ss_dssp             EEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEE-CTTCCHHHHHHHHHHTTCEEEE
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEE-CCCCCHHHHHHHHHHcCCceEe
Confidence            45789999999999999999999999999999999999999999 6778999999999999999864

>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A

Probab=99.04  E-value=6.5e-10  Score=89.25  Aligned_cols=67  Identities=27%  Similarity=0.542  Sum_probs=61.8

Q ss_pred             eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131           46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI  113 (845)
Q Consensus        46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  113 (845)
                      ++..|.|+||+|++|+..|++++++++||.++.+|+.++++.+.| +...+.+++.+++++.||.+++
T Consensus         2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~-~~~~~~~~i~~~i~~~Gy~~~~   68 (69)
T 4a4j_A            2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSY-HGETTPQILTDAVERAGYHARV   68 (69)
T ss_dssp             EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEE-CTTCCHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEE-CCCCCHHHHHHHHHHcCCceEe
Confidence            456799999999999999999999999999999999999999999 5678899999999999998753

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}

Probab=98.98  E-value=5.8e-10  Score=90.68  Aligned_cols=66  Identities=24%  Similarity=0.384  Sum_probs=61.0

Q ss_pred             eeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeec
Q 003131          127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQ  197 (845)
Q Consensus       127 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~  197 (845)
                      ..+..+.|+||+|++|+.+|+++|++ +||..+.+|+.++++.|.|+    +.++|.+.|+++||++.+..
T Consensus         4 m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~----~~~~i~~~i~~~Gy~~~~~~   69 (73)
T 3fry_A            4 VEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE----DVDKYIKAVEAAGYQAKLRS   69 (73)
T ss_dssp             CEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG----GHHHHHHHHHHTTCEEEECC
T ss_pred             cEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC----CHHHHHHHHHHcCCceEecC
Confidence            45678999999999999999999999 99999999999999999998    68999999999999988754

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A

Probab=98.97  E-value=1.6e-09  Score=87.48  Aligned_cols=67  Identities=28%  Similarity=0.486  Sum_probs=62.8

Q ss_pred             eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      +..+.|+||+|++|+.+|++.|.+++||.++.+|+.++++.+.|++...+.++|.+.++++||.+.+
T Consensus         4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   70 (72)
T 1osd_A            4 TVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSV   70 (72)
T ss_dssp             EEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEE
T ss_pred             EEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence            4578999999999999999999999999999999999999999999888899999999999998764

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}

Probab=98.96  E-value=1.6e-09  Score=87.24  Aligned_cols=67  Identities=34%  Similarity=0.595  Sum_probs=62.5

Q ss_pred             eeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCce
Q 003131          127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA  193 (845)
Q Consensus       127 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~  193 (845)
                      ..+..+.|+||+|++|+..|++.|.+++||.++.+++.++++.|.|++...+.++|.+.++++||.+
T Consensus         4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   70 (71)
T 2l3m_A            4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV   70 (71)
T ss_dssp             EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence            3456799999999999999999999999999999999999999999988888999999999999975

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A

Probab=98.95  E-value=1.2e-09  Score=87.32  Aligned_cols=64  Identities=23%  Similarity=0.463  Sum_probs=58.6

Q ss_pred             eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeec
Q 003131          129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQ  197 (845)
Q Consensus       129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~  197 (845)
                      +..|.| ||+|++|+.+|+++|++++|| ++.+|+.++++.|.++   .++++|.+.|++.||++.+..
T Consensus         3 ~~~~~v-gm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~---~~~~~i~~~i~~~Gy~~~~~~   66 (68)
T 3iwl_A            3 KHEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESE---HSMDTLLATLKKTGKTVSYLG   66 (68)
T ss_dssp             EEEEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEES---SCHHHHHHHHHTTCSCEEEEE
T ss_pred             eEEEEE-CcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEec---CCHHHHHHHHHHcCCceEecC
Confidence            457899 999999999999999999999 9999999999999973   578999999999999998643

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}

Probab=98.95  E-value=2.5e-09  Score=86.14  Aligned_cols=69  Identities=32%  Similarity=0.657  Sum_probs=63.4

Q ss_pred             CCceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcch
Q 003131           43 DGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA  111 (845)
Q Consensus        43 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~  111 (845)
                      +.+.+..|.|+||+|++|+..+++.+.+++||..+.+++..+++.+.+++...+.+++.+.+++.||.+
T Consensus         2 ~~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   70 (71)
T 2l3m_A            2 NAMEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV   70 (71)
T ss_dssp             CSEEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred             CCcEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence            346678899999999999999999999999999999999999999999877778899999999999975

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}

Probab=98.95  E-value=7.8e-10  Score=89.91  Aligned_cols=66  Identities=23%  Similarity=0.401  Sum_probs=60.8

Q ss_pred             CceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhh
Q 003131           44 GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEIL  114 (845)
Q Consensus        44 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~  114 (845)
                      .|.+..|.|+||+|++|+.+|++++++ +||..+.+|+.++++++.++    +.+++.+++++.||.+.+.
T Consensus         3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~----~~~~i~~~i~~~Gy~~~~~   68 (73)
T 3fry_A            3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE----DVDKYIKAVEAAGYQAKLR   68 (73)
T ss_dssp             CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG----GHHHHHHHHHHTTCEEEEC
T ss_pred             ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC----CHHHHHHHHHHcCCceEec
Confidence            467788999999999999999999999 99999999999999999876    6889999999999998654

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A

Probab=98.95  E-value=2.6e-09  Score=87.11  Aligned_cols=68  Identities=29%  Similarity=0.552  Sum_probs=63.3

Q ss_pred             eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeee
Q 003131          129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFV  196 (845)
Q Consensus       129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~  196 (845)
                      +..+.|+||+|++|+.+|++.|.+++||.++.+|+.++++.+.|++...+.++|.+.++++||.+.+.
T Consensus         3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~   70 (75)
T 3cjk_B            3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIH   70 (75)
T ss_dssp             EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEE
T ss_pred             EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEee
Confidence            35788999999999999999999999999999999999999999998888999999999999998653

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A

Probab=98.95  E-value=1.8e-09  Score=88.66  Aligned_cols=69  Identities=38%  Similarity=0.589  Sum_probs=64.1

Q ss_pred             eeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeee
Q 003131          128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFV  196 (845)
Q Consensus       128 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~  196 (845)
                      .+..+.|+||+|++|+.+|++.|.+++||.++.+|+.++++.|.|++...+.++|.+.++++||.+...
T Consensus         3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~   71 (77)
T 1y3j_A            3 SKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVI   71 (77)
T ss_dssp             EEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEE
T ss_pred             EEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEEC
Confidence            456799999999999999999999999999999999999999999988788899999999999998654

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A

Probab=98.95  E-value=1.2e-09  Score=87.36  Aligned_cols=66  Identities=24%  Similarity=0.376  Sum_probs=59.0

Q ss_pred             ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhhc
Q 003131           45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILA  115 (845)
Q Consensus        45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~  115 (845)
                      |.+..|.| ||+|++|+.+|++++++++|| ++.+|+.++++++.+   ..+++++.+++++.||.+.+++
T Consensus         1 m~~~~~~v-gm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~---~~~~~~i~~~i~~~Gy~~~~~~   66 (68)
T 3iwl_A            1 MPKHEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIES---EHSMDTLLATLKKTGKTVSYLG   66 (68)
T ss_dssp             -CEEEEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEE---SSCHHHHHHHHHTTCSCEEEEE
T ss_pred             CceEEEEE-CcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEe---cCCHHHHHHHHHHcCCceEecC
Confidence            35678999 999999999999999999999 999999999999986   3578999999999999986643

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A

Probab=98.93  E-value=2.5e-09  Score=88.27  Aligned_cols=69  Identities=29%  Similarity=0.540  Sum_probs=64.3

Q ss_pred             eeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       127 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      ..+..+.|+||+|++|+.+|++.|.+++||.++.+|+.++++.|.|++...+.++|.+.++++||.+.+
T Consensus         7 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~   75 (79)
T 1kvi_A            7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVI   75 (79)
T ss_dssp             CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEE
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEe
Confidence            456689999999999999999999999999999999999999999999878899999999999998765

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1

Probab=98.92  E-value=2.9e-09  Score=84.79  Aligned_cols=65  Identities=28%  Similarity=0.624  Sum_probs=61.0

Q ss_pred             ccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       131 ~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      .+.|+||+|++|+..|++.|.+++||.++.+|+.++++.+.|++...+.++|.+.+++.||++..
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   67 (68)
T 1cpz_A            3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV   67 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred             EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence            57899999999999999999999999999999999999999998878899999999999998753

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A

Probab=98.91  E-value=2.4e-09  Score=90.99  Aligned_cols=70  Identities=27%  Similarity=0.509  Sum_probs=64.1

Q ss_pred             eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhc---CCceeeecc
Q 003131          129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDA---GFEASFVQS  198 (845)
Q Consensus       129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~---G~~~~~~~~  198 (845)
                      +..+.|+||+|++|+.+|+++|.+++||.++.+|+.++++.|.|++..++.++|.+.|+++   ||++.+..+
T Consensus         4 ~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~   76 (90)
T 2g9o_A            4 TATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSE   76 (90)
T ss_dssp             EEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCC
T ss_pred             EEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCC
Confidence            4578999999999999999999999999999999999999999999878889999999999   598876543

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A

Probab=98.91  E-value=3.1e-09  Score=85.44  Aligned_cols=66  Identities=30%  Similarity=0.545  Sum_probs=59.2

Q ss_pred             eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      +..+.|+||+|++|+..|++.|.+++||.++.+|+.++++.|.|++. .+.++|.+.++++||.+.+
T Consensus         4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~i~~~i~~~G~~~~~   69 (71)
T 2xmw_A            4 TINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGE-TTPQILTDAVERAGYHARV   69 (71)
T ss_dssp             EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC----CHHHHHHHHHHHTCEEEE
T ss_pred             EEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCC-CCHHHHHHHHHHcCCCcee
Confidence            45789999999999999999999999999999999999999999976 7889999999999998764

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A

Probab=98.90  E-value=2.7e-09  Score=86.13  Aligned_cols=67  Identities=48%  Similarity=0.814  Sum_probs=62.4

Q ss_pred             eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      +..+.|+||+|++|+.+|++.|.+++||.++.+|+.++++.|.|++...+.++|.+.++++||.+.+
T Consensus         4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   70 (72)
T 1aw0_A            4 ETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATL   70 (72)
T ss_dssp             EEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEE
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEe
Confidence            3578999999999999999999999999999999999999999998878899999999999998764

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A

Probab=98.89  E-value=3.5e-09  Score=88.63  Aligned_cols=70  Identities=33%  Similarity=0.627  Sum_probs=64.8

Q ss_pred             eeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeec
Q 003131          128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQ  197 (845)
Q Consensus       128 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~  197 (845)
                      .+..+.|+||+|++|+.+|++.|.+++||.++.+|+.++++.|.|++..++.++|.+.++++||.+.+..
T Consensus         9 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   78 (84)
T 1q8l_A            9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKK   78 (84)
T ss_dssp             EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSC
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecC
Confidence            4568999999999999999999999999999999999999999999987889999999999999987643

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A

Probab=98.88  E-value=3.2e-09  Score=84.96  Aligned_cols=64  Identities=30%  Similarity=0.598  Sum_probs=60.1

Q ss_pred             ccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       131 ~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      .+.|+||+|++|+.+|+++|.+++||.++.+|+.++++.+.|++. .+.++|.+.++++||.+.+
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~i~~~i~~~Gy~~~~   66 (69)
T 2kt2_A            3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPG-TSPDALTAAVAGLGYKATL   66 (69)
T ss_dssp             CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTT-SCHHHHHHHHHTTTSEEEC
T ss_pred             EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCC-CCHHHHHHHHHHCCCceEe
Confidence            578999999999999999999999999999999999999999987 6889999999999998764

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}

Probab=98.88  E-value=4.9e-09  Score=82.88  Aligned_cols=63  Identities=29%  Similarity=0.499  Sum_probs=58.8

Q ss_pred             eccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCce
Q 003131          130 GQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA  193 (845)
Q Consensus       130 ~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~  193 (845)
                      ..+.|+||+|++|+.+|++.|.+++||.++.+|+.++++.+.|++.. +.++|.+.++++||++
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~-~~~~i~~~i~~~G~~~   65 (66)
T 1yg0_A            3 ATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPA-TQDLIKEALLDAGQEV   65 (66)
T ss_dssp             EEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTC-CHHHHHHHHHHHTCCC
T ss_pred             EEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCC-CHHHHHHHHHHcCCCc
Confidence            46889999999999999999999999999999999999999999874 8899999999999975

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A

Probab=98.86  E-value=5.9e-09  Score=82.95  Aligned_cols=64  Identities=36%  Similarity=0.624  Sum_probs=60.5

Q ss_pred             eccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCce
Q 003131          130 GQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA  193 (845)
Q Consensus       130 ~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~  193 (845)
                      ..+.|+||+|++|+..+++.|.+++||.++.+|+.++++.+.|++...+.++|.+.++++||.+
T Consensus         4 ~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   67 (69)
T 2qif_A            4 KTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV   67 (69)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred             EEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence            4688999999999999999999999999999999999999999998888999999999999975

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A

Probab=98.86  E-value=6.9e-09  Score=83.68  Aligned_cols=68  Identities=31%  Similarity=0.576  Sum_probs=62.3

Q ss_pred             eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131           46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI  113 (845)
Q Consensus        46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  113 (845)
                      .+..|.|+||+|++|+..+++.+.+++||.++.+|+..+++.+.+++...+.+++.+.+++.||.+.+
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   70 (72)
T 1osd_A            3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSV   70 (72)
T ss_dssp             EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEE
T ss_pred             eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence            45679999999999999999999999999999999999999999987777889999999999997643

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A

Probab=98.85  E-value=9.6e-09  Score=83.73  Aligned_cols=72  Identities=33%  Similarity=0.596  Sum_probs=64.7

Q ss_pred             CCCceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131           42 GDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI  113 (845)
Q Consensus        42 ~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  113 (845)
                      ...+.+..|.|+||+|++|+..+++.+.+++||..+.+|+..+++.+.+++...+.+++.+.+++.||.+.+
T Consensus         2 ~~~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   73 (76)
T 1opz_A            2 LSEQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVI   73 (76)
T ss_dssp             CCCCEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEC
T ss_pred             CccceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceec
Confidence            345677789999999999999999999999999999999999999999987777889999999999997643

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A

Probab=98.83  E-value=7.8e-09  Score=84.28  Aligned_cols=68  Identities=37%  Similarity=0.556  Sum_probs=63.1

Q ss_pred             eeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       128 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      .+..+.|+||+|++|+..|++.|.+++||.++.+|+.++++.|.|++...+.++|.+.++++||.+..
T Consensus         6 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   73 (76)
T 1opz_A            6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVI   73 (76)
T ss_dssp             EEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEC
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceec
Confidence            45679999999999999999999999999999999999999999998888899999999999998754

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A

Probab=98.83  E-value=7.2e-09  Score=85.45  Aligned_cols=70  Identities=33%  Similarity=0.693  Sum_probs=63.7

Q ss_pred             CceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131           44 GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI  113 (845)
Q Consensus        44 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  113 (845)
                      +..+..|.|+||+|++|+..+++++.+++||.++.+|+.++++.+.+++...+.+++.+++++.||.+.+
T Consensus         6 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~   75 (79)
T 1kvi_A            6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVI   75 (79)
T ss_dssp             TCEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEE
T ss_pred             CcEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEe
Confidence            3566789999999999999999999999999999999999999999987767889999999999998654

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B

Probab=98.83  E-value=9.1e-09  Score=82.95  Aligned_cols=67  Identities=36%  Similarity=0.662  Sum_probs=61.8

Q ss_pred             eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeee
Q 003131          129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFV  196 (845)
Q Consensus       129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~  196 (845)
                      +..+.|+||+|++|+.+|++.+.+++||.++.+|+.++++.+.|+ ...+.++|.+.++++||.+.+.
T Consensus         3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~-~~~~~~~i~~~i~~~G~~~~~~   69 (72)
T 1fvq_A            3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYD-NEVTADSIKEIIEDCGFDCEIL   69 (72)
T ss_dssp             EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEEC-TTSCHHHHHHHHHHHTCCEEEE
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEEC-CCCCHHHHHHHHHHCCCceEEc
Confidence            347889999999999999999999999999999999999999999 6678899999999999988753

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A

Probab=98.83  E-value=5.1e-09  Score=85.22  Aligned_cols=67  Identities=42%  Similarity=0.704  Sum_probs=62.2

Q ss_pred             eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      +..+.|+||+|++|+.+|++.|.+++||.++.+|+.++++.+.|++...+.++|.+.++++||.+..
T Consensus         5 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   71 (75)
T 1yjr_A            5 VLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSL   71 (75)
T ss_dssp             CEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEE
T ss_pred             EEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcee
Confidence            3578999999999999999999999999999999999999999998877888999999999998764

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A

Probab=98.82  E-value=1.3e-08  Score=80.83  Aligned_cols=66  Identities=39%  Similarity=0.655  Sum_probs=60.8

Q ss_pred             eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcch
Q 003131           46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA  111 (845)
Q Consensus        46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~  111 (845)
                      .+..|.|+||+|++|+..+++.+.+++||..+.+|+..+++.+.+++...+.+++.+.+++.||.+
T Consensus         2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   67 (69)
T 2qif_A            2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV   67 (69)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence            456799999999999999999999999999999999999999999877778889999999999975

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A

Probab=98.82  E-value=1e-08  Score=83.06  Aligned_cols=65  Identities=31%  Similarity=0.505  Sum_probs=59.9

Q ss_pred             eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      +..+.|+||+|++|+.+|++.|.+++||.++.+|+.++++.|.|++.  ..++|.+.++++||.+..
T Consensus         4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~--~~~~i~~~i~~~Gy~~~~   68 (73)
T 1mwy_A            4 RYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADND--IRAQVESALQKAGYSLRD   68 (73)
T ss_dssp             EEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSC--CHHHHHHHHHHHTCEEEE
T ss_pred             EEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCC--CHHHHHHHHHHcCCcccc
Confidence            45789999999999999999999999999999999999999999984  378899999999998764

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A

Probab=98.82  E-value=1e-08  Score=86.97  Aligned_cols=70  Identities=27%  Similarity=0.449  Sum_probs=63.1

Q ss_pred             eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhc---Ccchhhhc
Q 003131           46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDA---GFEAEILA  115 (845)
Q Consensus        46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~---Gy~~~~~~  115 (845)
                      ++..|.|+||+|++|+..|++++.+++||.++.+|+.++++.+.+++...+.+++.++++++   ||.+.+..
T Consensus         3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~   75 (90)
T 2g9o_A            3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITS   75 (90)
T ss_dssp             EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCC
T ss_pred             cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeC
Confidence            45679999999999999999999999999999999999999999987777889999999999   59876543

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}

Probab=98.82  E-value=6.4e-09  Score=83.41  Aligned_cols=66  Identities=39%  Similarity=0.623  Sum_probs=61.4

Q ss_pred             eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCcee
Q 003131          129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEAS  194 (845)
Q Consensus       129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~  194 (845)
                      +..+.|+||+|++|+.++++.|.+++||.++.+|+.++++.+.|++...+.+++.+.++++||.+.
T Consensus         4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~   69 (71)
T 2ldi_A            4 TQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA   69 (71)
T ss_dssp             EEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred             EEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence            456899999999999999999999999999999999999999999877888999999999999864

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A

Probab=98.81  E-value=1.5e-08  Score=82.59  Aligned_cols=67  Identities=33%  Similarity=0.681  Sum_probs=61.7

Q ss_pred             EEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131           47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI  113 (845)
Q Consensus        47 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  113 (845)
                      +..|.|+||+|++|+..+++.+.+++||.++.+|+.++++.+.+++...+.+++.+.+++.||.+.+
T Consensus         3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~   69 (75)
T 3cjk_B            3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVI   69 (75)
T ss_dssp             EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEE
T ss_pred             EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEe
Confidence            4569999999999999999999999999999999999999999987777889999999999998754

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A

Probab=98.81  E-value=8.8e-09  Score=86.18  Aligned_cols=70  Identities=34%  Similarity=0.654  Sum_probs=63.7

Q ss_pred             ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhh
Q 003131           45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEIL  114 (845)
Q Consensus        45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~  114 (845)
                      ..+..|.|+||+|++|+..|++.+.+++||.++.+|+..+++.+.+++...+.+++.+.+++.||.+.+.
T Consensus         8 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~   77 (84)
T 1q8l_A            8 EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVK   77 (84)
T ss_dssp             CEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECS
T ss_pred             ceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEec
Confidence            3567799999999999999999999999999999999999999999877778899999999999987553

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A

Probab=98.79  E-value=4.9e-09  Score=86.01  Aligned_cols=69  Identities=33%  Similarity=0.586  Sum_probs=63.4

Q ss_pred             ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131           45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI  113 (845)
Q Consensus        45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  113 (845)
                      |.+..|.|+||+|++|+..|++++.+++||..+.+++.++++.+.+++...+.+++.+++++.||.+.+
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~   70 (77)
T 1y3j_A            2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATV   70 (77)
T ss_dssp             CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEE
T ss_pred             CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEE
Confidence            567789999999999999999999999999999999999999999987767888999999999998754

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A

Probab=98.79  E-value=1.1e-08  Score=82.51  Aligned_cols=67  Identities=36%  Similarity=0.682  Sum_probs=61.2

Q ss_pred             EEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131           47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI  113 (845)
Q Consensus        47 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  113 (845)
                      +..|.|+||+|++|+..+++++.+++||.++.+|+..+++.+.+++.....+++.+.+++.||.+.+
T Consensus         4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   70 (72)
T 1aw0_A            4 ETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATL   70 (72)
T ss_dssp             EEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEE
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEe
Confidence            4579999999999999999999999999999999999999999987667888999999999997643

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A

Probab=98.79  E-value=1.6e-08  Score=81.99  Aligned_cols=67  Identities=33%  Similarity=0.481  Sum_probs=60.4

Q ss_pred             ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131           45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI  113 (845)
Q Consensus        45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  113 (845)
                      |++..|.|+||+|++|+..|++.+.+++||..+.+|+.++++.+.+++.  ..+++.+.+++.||.+..
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~--~~~~i~~~i~~~Gy~~~~   68 (73)
T 1mwy_A            2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADND--IRAQVESALQKAGYSLRD   68 (73)
T ss_dssp             CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSC--CHHHHHHHHHHHTCEEEE
T ss_pred             CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCC--CHHHHHHHHHHcCCcccc
Confidence            5677899999999999999999999999999999999999999999763  477899999999998753

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A

Probab=98.79  E-value=1.2e-08  Score=84.28  Aligned_cols=68  Identities=35%  Similarity=0.614  Sum_probs=63.1

Q ss_pred             eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeee
Q 003131          129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFV  196 (845)
Q Consensus       129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~  196 (845)
                      +..+.|+||+|++|+.++++.|.+++||.++.+|+.++++.+.|++...+.++|.+.++++||.+...
T Consensus         4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   71 (80)
T 1jww_A            4 KAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLK   71 (80)
T ss_dssp             EEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEEC
T ss_pred             EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEec
Confidence            45789999999999999999999999999999999999999999988788999999999999988653

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A

Probab=98.78  E-value=1.6e-08  Score=81.23  Aligned_cols=66  Identities=30%  Similarity=0.575  Sum_probs=58.4

Q ss_pred             eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchh
Q 003131           46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE  112 (845)
Q Consensus        46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~  112 (845)
                      .+..|.|+||+|++|+..+++.+.+++||.++.+|+.++++.+.+++. .+.+++.+.+++.||.+.
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~i~~~i~~~G~~~~   68 (71)
T 2xmw_A            3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGE-TTPQILTDAVERAGYHAR   68 (71)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC----CHHHHHHHHHHHTCEEE
T ss_pred             cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCC-CCHHHHHHHHHHcCCCce
Confidence            346799999999999999999999999999999999999999999765 778899999999999764

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1

Probab=98.77  E-value=1.7e-08  Score=80.26  Aligned_cols=64  Identities=38%  Similarity=0.610  Sum_probs=59.5

Q ss_pred             EEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchh
Q 003131           49 QVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE  112 (845)
Q Consensus        49 ~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~  112 (845)
                      .|.++||+|++|+..+++.+.+++||.++.+|+..+++.+.+++...+.+++.+.+++.||.++
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~   66 (68)
T 1cpz_A            3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAE   66 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEE
T ss_pred             EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence            4889999999999999999999999999999999999999998777788999999999999764

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}

Probab=98.76  E-value=1.7e-08  Score=80.89  Aligned_cols=66  Identities=41%  Similarity=0.666  Sum_probs=60.8

Q ss_pred             eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcch
Q 003131           46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA  111 (845)
Q Consensus        46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~  111 (845)
                      ++..|.|+||+|++|+..+++.+.+++||..+.+|+.++++.+.+++...+.+++.+.+++.||.+
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   68 (71)
T 2ldi_A            3 KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTL   68 (71)
T ss_dssp             EEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEE
T ss_pred             EEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence            456799999999999999999999999999999999999999999876677889999999999975

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}

Probab=98.75  E-value=3.2e-08  Score=84.95  Aligned_cols=74  Identities=26%  Similarity=0.336  Sum_probs=65.9

Q ss_pred             cCCCceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhh
Q 003131           41 IGDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEIL  114 (845)
Q Consensus        41 ~~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~  114 (845)
                      ....|.+..|.|+||+|++|+..|++.+.+++||..+.+++..+.+.+.+++...+.+.+.++++++||.+.+.
T Consensus        11 ~~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~   84 (95)
T 2kkh_A           11 KVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVR   84 (95)
T ss_dssp             CSSCSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEES
T ss_pred             cccceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEe
Confidence            34456778899999999999999999999999999999999999999999876677889999999999987554

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A

Probab=98.75  E-value=1.4e-08  Score=80.46  Aligned_cols=62  Identities=29%  Similarity=0.588  Sum_probs=56.8

Q ss_pred             ccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       131 ~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      .+.|+||+|++|+.+|+++|.+++||.++.+|+.++++.|  + ...+.++|.+.++++||.+..
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v--~-~~~~~~~i~~~i~~~Gy~~~~   64 (66)
T 2roe_A            3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALV--E-GTADPKALVQAVEEEGYKAEV   64 (66)
T ss_dssp             CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEE--C-SCCCHHHHHHHHHTTTCEEEE
T ss_pred             EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEE--C-CCCCHHHHHHHHHHcCCCcEe
Confidence            5789999999999999999999999999999999999999  3 457889999999999998754

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}

Probab=98.74  E-value=2.2e-08  Score=78.99  Aligned_cols=64  Identities=28%  Similarity=0.444  Sum_probs=58.2

Q ss_pred             EEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcch
Q 003131           47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA  111 (845)
Q Consensus        47 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~  111 (845)
                      +..|.|+||+|++|+..+++++.+++||..+.+|+.++++.+.+++.. +.+++.+.+++.||.+
T Consensus         2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~-~~~~i~~~i~~~G~~~   65 (66)
T 1yg0_A            2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPA-TQDLIKEALLDAGQEV   65 (66)
T ss_dssp             EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTC-CHHHHHHHHHHHTCCC
T ss_pred             eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCC-CHHHHHHHHHHcCCCc
Confidence            346899999999999999999999999999999999999999987653 7889999999999964

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}

Probab=98.74  E-value=3.4e-08  Score=84.74  Aligned_cols=70  Identities=30%  Similarity=0.377  Sum_probs=64.6

Q ss_pred             eeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeee
Q 003131          127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFV  196 (845)
Q Consensus       127 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~  196 (845)
                      ..+..+.|+||+|++|+..|++.|.+++||..+.+++..+++.|.|++..++.+.|.+.++++||.+...
T Consensus        15 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~   84 (95)
T 2kkh_A           15 LQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVR   84 (95)
T ss_dssp             SEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEES
T ss_pred             eEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEe
Confidence            4567899999999999999999999999999999999999999999988778899999999999988654

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A

Probab=98.73  E-value=3.1e-08  Score=80.31  Aligned_cols=64  Identities=27%  Similarity=0.379  Sum_probs=58.6

Q ss_pred             eeeccccCCccchhhHHHHHHHhcCCC-CeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          128 IVGQYTIGGMTCAACVNSVEGILRGLP-GVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       128 ~~~~~~v~gm~C~~C~~~ie~~l~~~~-GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      .+..+.|+ |+|++|+.+|+++|.+++ ||.++.+|+.++++.|.++   .+.++|.+.|+++||++..
T Consensus         5 ~~~~~~v~-m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~---~~~~~i~~~i~~~Gy~~~~   69 (73)
T 1cc8_A            5 KHYQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT---LPYDFILEKIKKTGKEVRS   69 (73)
T ss_dssp             EEEEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEES---SCHHHHHHHHHTTSSCEEE
T ss_pred             eEEEEEEe-eECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEe---CCHHHHHHHHHHhCCCcee
Confidence            34578999 999999999999999999 9999999999999999973   5789999999999999865

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B

Probab=98.73  E-value=2.2e-08  Score=80.67  Aligned_cols=66  Identities=42%  Similarity=0.813  Sum_probs=60.7

Q ss_pred             EEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131           47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI  113 (845)
Q Consensus        47 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  113 (845)
                      +..|.++||+|++|+..+++.+.+++||.++.+|+.++++.+.++ ...+.+++.+.+++.||.+.+
T Consensus         3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~-~~~~~~~i~~~i~~~G~~~~~   68 (72)
T 1fvq_A            3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYD-NEVTADSIKEIIEDCGFDCEI   68 (72)
T ss_dssp             EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEEC-TTSCHHHHHHHHHHHTCCEEE
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEEC-CCCCHHHHHHHHHHCCCceEE
Confidence            467999999999999999999999999999999999999999998 667889999999999998754

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A

Probab=98.71  E-value=2.5e-08  Score=79.60  Aligned_cols=64  Identities=28%  Similarity=0.552  Sum_probs=58.7

Q ss_pred             EEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131           49 QVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI  113 (845)
Q Consensus        49 ~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  113 (845)
                      .|.|+||+|++|+..+++++.+++||.++.+|+..+++.+.+++. ...+++.+.++++||.+.+
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~i~~~i~~~Gy~~~~   66 (69)
T 2kt2_A            3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPG-TSPDALTAAVAGLGYKATL   66 (69)
T ss_dssp             CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTT-SCHHHHHHHHHTTTSEEEC
T ss_pred             EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCC-CCHHHHHHHHHHCCCceEe
Confidence            388999999999999999999999999999999999999998765 6788999999999998643

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A

Probab=98.71  E-value=4.3e-08  Score=79.45  Aligned_cols=65  Identities=29%  Similarity=0.437  Sum_probs=59.0

Q ss_pred             ceEEEEEeCCCCchhhHHHHHHhhhCCC-CceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131           45 MRRIQVGVTGMTCAACSNSVEGALMGLK-GVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI  113 (845)
Q Consensus        45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~-gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  113 (845)
                      +.+..|.|+ |+|++|+.+|++++.+++ ||.++.+|+.++++.+.+   ..+.+++.+++++.||.+..
T Consensus         4 m~~~~~~v~-m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~---~~~~~~i~~~i~~~Gy~~~~   69 (73)
T 1cc8_A            4 IKHYQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYT---TLPYDFILEKIKKTGKEVRS   69 (73)
T ss_dssp             CEEEEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEE---SSCHHHHHHHHHTTSSCEEE
T ss_pred             ceEEEEEEe-eECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEE---eCCHHHHHHHHHHhCCCcee
Confidence            456789999 999999999999999999 999999999999999986   35788999999999998754

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A

Probab=98.70  E-value=2.6e-08  Score=82.17  Aligned_cols=69  Identities=30%  Similarity=0.619  Sum_probs=62.8

Q ss_pred             ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131           45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI  113 (845)
Q Consensus        45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  113 (845)
                      |.+..|.|+||+|++|+..+++.+.+++||..+.+|+..+++.+.+++...+.+++.+.+++.||.+..
T Consensus         2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   70 (80)
T 1jww_A            2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKL   70 (80)
T ss_dssp             CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEE
T ss_pred             ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEe
Confidence            356679999999999999999999999999999999999999999987777888999999999998754

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A

Probab=98.68  E-value=2.6e-08  Score=80.93  Aligned_cols=66  Identities=39%  Similarity=0.718  Sum_probs=60.0

Q ss_pred             EEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchh
Q 003131           47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE  112 (845)
Q Consensus        47 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~  112 (845)
                      +..|.|+||+|++|+..+++.+.+++||.++.+|+..+++.+.+++...+.+++.+.+++.||.+.
T Consensus         5 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~   70 (75)
T 1yjr_A            5 VLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPS   70 (75)
T ss_dssp             CEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEE
T ss_pred             EEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCce
Confidence            356899999999999999999999999999999999999999998766677889999999999764

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}

Probab=98.68  E-value=1.3e-08  Score=80.93  Aligned_cols=61  Identities=20%  Similarity=0.313  Sum_probs=56.3

Q ss_pred             eccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          130 GQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       130 ~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      ..+.|+||+|++|+.+|+++|.++ ||.++.+|+.++++.+.+++.    ++|.+.++++||++..
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~----~~i~~~i~~~Gy~~~~   63 (67)
T 2kyz_A            3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL----DSVLKKLEEIDYPVES   63 (67)
T ss_dssp             EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH----HHHHHHHHTTTCCCCB
T ss_pred             EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH----HHHHHHHHHcCCceee
Confidence            368899999999999999999999 999999999999999999874    7899999999998764

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}

Probab=98.66  E-value=2.3e-08  Score=83.64  Aligned_cols=64  Identities=19%  Similarity=0.217  Sum_probs=58.2

Q ss_pred             eeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCce
Q 003131          127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA  193 (845)
Q Consensus       127 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~  193 (845)
                      ..+..+.|+||+|++|+.+|+++|.+++||.++.+|+.++++.|.++   .+.++|.+.|+++||++
T Consensus        21 ~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~---~~~~~i~~~i~~~Gy~~   84 (85)
T 2k2p_A           21 GAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGV---SDAAHIAEIITAAGYTP   84 (85)
T ss_dssp             -CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESC---CCHHHHHHHHHHTTCCC
T ss_pred             ccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEec---CCHHHHHHHHHHcCCCC
Confidence            34567999999999999999999999999999999999999999974   57899999999999975

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A

Probab=98.64  E-value=3.7e-08  Score=77.12  Aligned_cols=61  Identities=21%  Similarity=0.388  Sum_probs=55.8

Q ss_pred             eccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCce
Q 003131          130 GQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA  193 (845)
Q Consensus       130 ~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~  193 (845)
                      ..+.|+||+|++|+.+|++.|.+++||.++.+|+.++++.+.+   ..+.++|.+.++++||.+
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~---~~~~~~i~~~i~~~G~~~   63 (64)
T 2xmm_A            3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITS---ALGEEQLRTAIASAGYEV   63 (64)
T ss_dssp             EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEEC---SSCHHHHHHHHHHTTCCC
T ss_pred             EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEe---cCCHHHHHHHHHHcCCCC
Confidence            3688999999999999999999999999999999999999984   357889999999999975

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.62  E-value=1.5e-07  Score=81.02  Aligned_cols=68  Identities=24%  Similarity=0.441  Sum_probs=61.1

Q ss_pred             eeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeecc
Q 003131          127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQS  198 (845)
Q Consensus       127 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~  198 (845)
                      ..+..|.|+ |+|++|+.+|+++|.+++||.++.+|+.++++.|.|+   .+.++|.+.|+++||++.+...
T Consensus        18 ~~~~~l~V~-m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~---~~~~~i~~~i~~~Gy~~~~~~~   85 (98)
T 2crl_A           18 LCTLEFAVQ-MTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTT---LPSQEVQALLEGTGRQAVLKGM   85 (98)
T ss_dssp             CEEEEEEEC-CCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEES---SCHHHHHHHHHTTTSCEEEEES
T ss_pred             ceEEEEEEe-eECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEe---CCHHHHHHHHHHhCCceEEccC
Confidence            345689999 9999999999999999999999999999999999984   5789999999999999877543

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A

Probab=98.61  E-value=4.9e-08  Score=77.20  Aligned_cols=61  Identities=34%  Similarity=0.574  Sum_probs=55.6

Q ss_pred             EEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchh
Q 003131           49 QVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE  112 (845)
Q Consensus        49 ~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~  112 (845)
                      .|.|+||+|++|+..+++++.+++||.++.+|+.++++.+  + ...+.+++.+++++.||.+.
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v--~-~~~~~~~i~~~i~~~Gy~~~   63 (66)
T 2roe_A            3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALV--E-GTADPKALVQAVEEEGYKAE   63 (66)
T ss_dssp             CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEE--C-SCCCHHHHHHHHHTTTCEEE
T ss_pred             EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEE--C-CCCCHHHHHHHHHHcCCCcE
Confidence            4889999999999999999999999999999999999998  3 45788999999999999864

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}

Probab=98.60  E-value=4.9e-08  Score=81.65  Aligned_cols=64  Identities=20%  Similarity=0.233  Sum_probs=57.5

Q ss_pred             ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcch
Q 003131           45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA  111 (845)
Q Consensus        45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~  111 (845)
                      +.+..|.|+||+|++|+..|++++.+++||.++.+|+.++++.+.++   .+.+++.++++++||.+
T Consensus        21 ~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~---~~~~~i~~~i~~~Gy~~   84 (85)
T 2k2p_A           21 GAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGV---SDAAHIAEIITAAGYTP   84 (85)
T ss_dssp             -CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESC---CCHHHHHHHHHHTTCCC
T ss_pred             ccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEec---CCHHHHHHHHHHcCCCC
Confidence            45567999999999999999999999999999999999999999852   57889999999999975

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A

Probab=98.60  E-value=5.8e-08  Score=75.99  Aligned_cols=61  Identities=30%  Similarity=0.517  Sum_probs=55.4

Q ss_pred             EEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcch
Q 003131           48 IQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA  111 (845)
Q Consensus        48 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~  111 (845)
                      ..|.|+||+|++|+..+++.+.+++||.++.+|+.++++.+..   ..+.+++.+++++.||.+
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~---~~~~~~i~~~i~~~G~~~   63 (64)
T 2xmm_A            3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITS---ALGEEQLRTAIASAGYEV   63 (64)
T ss_dssp             EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEEC---SSCHHHHHHHHHHTTCCC
T ss_pred             EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEe---cCCHHHHHHHHHHcCCCC
Confidence            4689999999999999999999999999999999999999873   356889999999999975

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.58  E-value=1.9e-07  Score=80.38  Aligned_cols=68  Identities=24%  Similarity=0.431  Sum_probs=61.0

Q ss_pred             ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhhcc
Q 003131           45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAE  116 (845)
Q Consensus        45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~  116 (845)
                      +.+..|.|+ |+|++|+++|+++|.+++||.++.+|+.++++++.++   .+.+++.+++++.||.+.+...
T Consensus        18 ~~~~~l~V~-m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~---~~~~~i~~~i~~~Gy~~~~~~~   85 (98)
T 2crl_A           18 LCTLEFAVQ-MTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTT---LPSQEVQALLEGTGRQAVLKGM   85 (98)
T ss_dssp             CEEEEEEEC-CCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEES---SCHHHHHHHHHTTTSCEEEEES
T ss_pred             ceEEEEEEe-eECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEe---CCHHHHHHHHHHhCCceEEccC
Confidence            456789999 9999999999999999999999999999999999873   5688999999999999876544

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}

Probab=98.58  E-value=4.4e-08  Score=77.80  Aligned_cols=61  Identities=21%  Similarity=0.351  Sum_probs=55.1

Q ss_pred             EEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131           48 IQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI  113 (845)
Q Consensus        48 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  113 (845)
                      ..|.|+||+|++|+..+++++.++ ||..+.+|+.++++.+.+++.    +++.+++++.||.+.+
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~----~~i~~~i~~~Gy~~~~   63 (67)
T 2kyz_A            3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL----DSVLKKLEEIDYPVES   63 (67)
T ss_dssp             EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH----HHHHHHHHTTTCCCCB
T ss_pred             EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH----HHHHHHHHHcCCceee
Confidence            569999999999999999999999 999999999999999987643    7899999999998643

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=98.44  E-value=2.2e-08  Score=105.93  Aligned_cols=43  Identities=14%  Similarity=0.074  Sum_probs=41.4

Q ss_pred             eCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          802 ADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       802 ~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      .+++||+++++++.|+++|++++|+|||+..++.++|+++|+.
T Consensus       139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~  181 (297)
T 4fe3_A          139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVY  181 (297)
T ss_dssp             CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCC
T ss_pred             CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence            4799999999999999999999999999999999999999985

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A

Probab=98.31  E-value=5e-07  Score=72.47  Aligned_cols=60  Identities=23%  Similarity=0.445  Sum_probs=53.1

Q ss_pred             eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      +..+.|+||+|++|+.+|++.|.+++||.++.+|+..+++.|.+++.       .+.|+++||.+.+
T Consensus         4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~-------~~~i~~~Gy~~~~   63 (71)
T 2aj0_A            4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS-------IQQVEQAGAFEHL   63 (71)
T ss_dssp             EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC-------HHHHHHHHTTTTC
T ss_pred             EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc-------HHHHHHhCCCccc
Confidence            34688999999999999999999999999999999999999998862       3577899998654

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A

Probab=98.29  E-value=1e-06  Score=70.59  Aligned_cols=60  Identities=23%  Similarity=0.404  Sum_probs=52.4

Q ss_pred             EEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131           47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI  113 (845)
Q Consensus        47 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  113 (845)
                      +..|.|+||+|++|+..|++++.+++||.++.+|+..+++.+.++.   .    .+.++++||.+.+
T Consensus         4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~---~----~~~i~~~Gy~~~~   63 (71)
T 2aj0_A            4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEA---S----IQQVEQAGAFEHL   63 (71)
T ss_dssp             EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESC---C----HHHHHHHHTTTTC
T ss_pred             EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecC---c----HHHHHHhCCCccc
Confidence            4679999999999999999999999999999999999999998754   2    4567889997654

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.17  E-value=1.9e-06  Score=101.93  Aligned_cols=67  Identities=34%  Similarity=0.520  Sum_probs=63.2

Q ss_pred             eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      +..+.|+||+|++|+++||+.+++++||.++++|+.++++.|+||+...+.+++.+.++++||++..
T Consensus         3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~   69 (723)
T 3j09_A            3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVD   69 (723)
T ss_dssp             CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESS
T ss_pred             eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCcccc
Confidence            3478999999999999999999999999999999999999999999989999999999999999754

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.16  E-value=4.7e-06  Score=82.78  Aligned_cols=68  Identities=24%  Similarity=0.500  Sum_probs=60.5

Q ss_pred             eeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeeccC
Q 003131          128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSS  199 (845)
Q Consensus       128 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~  199 (845)
                      .+..+.|+ |+|++|+.+||++|++++||.++++|+.++++.|.++   .++++|.+.|+++||++.+....
T Consensus         6 ~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~~~~~   73 (222)
T 1qup_A            6 YEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAPSTIINTLRNCGKDAIIRGAG   73 (222)
T ss_dssp             EEEEEECC-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES---SCHHHHHHHHHHTTCCCEEECCS
T ss_pred             eEEEEEEc-cccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEecc---CCHHHHHHHHHHcCCccccccCC
Confidence            34578999 9999999999999999999999999999999999963   57899999999999998775543

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.04  E-value=1e-05  Score=80.37  Aligned_cols=66  Identities=21%  Similarity=0.351  Sum_probs=59.0

Q ss_pred             eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhhc
Q 003131           46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILA  115 (845)
Q Consensus        46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~  115 (845)
                      .+..|.|+ |+|++|+++||+++++++||.++.+|+.++++++..   ..+.+++.++++++||.+.+..
T Consensus         6 ~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~---~~~~~~I~~aI~~~Gy~a~~~~   71 (222)
T 1qup_A            6 YEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVES---SVAPSTIINTLRNCGKDAIIRG   71 (222)
T ss_dssp             EEEEEECC-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEE---SSCHHHHHHHHHHTTCCCEEEC
T ss_pred             eEEEEEEc-cccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEec---cCCHHHHHHHHHHcCCcccccc
Confidence            45679999 999999999999999999999999999999999985   3578899999999999876543

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.01  E-value=9.6e-06  Score=81.83  Aligned_cols=68  Identities=24%  Similarity=0.493  Sum_probs=60.4

Q ss_pred             eeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeeccC
Q 003131          128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSS  199 (845)
Q Consensus       128 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~  199 (845)
                      .+..+.|+ |+|++|+.+||++|++++||.++++|+.++++.|..   ..++++|.+.|+++||++.+....
T Consensus         7 ~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~---~~~~~~I~~aIe~~Gy~a~~~~~~   74 (249)
T 1jk9_B            7 YEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVES---SVAPSTIINTLRNCGKDAIIRGAG   74 (249)
T ss_dssp             EEEEEECC-CCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEE---SSCHHHHHHHHHTTTCCCEEEEES
T ss_pred             eeEEEEEe-eccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEec---CCCHHHHHHHHHHhCCCcccccCC
Confidence            34578999 999999999999999999999999999999999984   357899999999999998775443

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=97.92  E-value=1.7e-05  Score=79.97  Aligned_cols=88  Identities=17%  Similarity=0.227  Sum_probs=68.5

Q ss_pred             eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhhcccCCCCCCCC
Q 003131           46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGPKPQ  125 (845)
Q Consensus        46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~~~~  125 (845)
                      .+..|.|+ |+|++|+.+||+++++++||.++.+|+.++++.+..   ..+++++.++++++||.+.+......     +
T Consensus         7 ~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~---~~~~~~I~~aIe~~Gy~a~~~~~~~~-----~   77 (249)
T 1jk9_B            7 YEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVES---SVAPSTIINTLRNCGKDAIIRGAGKP-----N   77 (249)
T ss_dssp             EEEEEECC-CCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEE---SSCHHHHHHHHHTTTCCCEEEEESST-----T
T ss_pred             eeEEEEEe-eccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEec---CCCHHHHHHHHHHhCCCcccccCCcc-----c
Confidence            55679999 999999999999999999999999999999999974   35788999999999999866543221     1


Q ss_pred             ceeeeccccCCccchhh
Q 003131          126 GTIVGQYTIGGMTCAAC  142 (845)
Q Consensus       126 ~~~~~~~~v~gm~C~~C  142 (845)
                      ......+.-....|..|
T Consensus        78 ~~Av~~l~~~~~~~~~~   94 (249)
T 1jk9_B           78 SSAVAILETFQKYTIDQ   94 (249)
T ss_dssp             SEEEEEEEESSCCTTSC
T ss_pred             ceeEEEecccccccccc
Confidence            12333344445567666

>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli}

Probab=97.29  E-value=0.00086  Score=63.57  Aligned_cols=127  Identities=13%  Similarity=0.017  Sum_probs=75.6

Q ss_pred             EEEEEEeccCCChhhHHHHHhhhh---ccCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccC
Q 003131          664 TVTTAKVFTKMDRGEFLTLVASAE---ASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALP  740 (845)
Q Consensus       664 ~v~~~~~~~~~~~~~~~~~~~~~~---~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (845)
                      .+.......+.+.++++.+++...   ....+|++.||++++...+..              ............+|++..
T Consensus         3 ~l~~~~d~~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~--------------~~~~~~~~~~eiPFds~r   68 (170)
T 3gwi_A            3 VLENHTDISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESAR--------------SLASRWQKIDEIPFDFER   68 (170)
T ss_dssp             EEEEEECTTSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHH--------------HHHHHSEEEEEECCCTTT
T ss_pred             EEEEEeCCCCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChh--------------hhhhcCeEEeeEecCccc
Confidence            344555566777788888876655   346899999999876432100              000011123344555555


Q ss_pred             CCceEEEE--cCe--EEEEeehhhhhhcCC---------CCC----hhhHHHHHHHHHccCeEEEEEE------------
Q 003131          741 GRGIQCFI--SGK--QVLVGNRKLLNESGI---------TIP----DHVESFVVELEESARTGILVAY------------  791 (845)
Q Consensus       741 g~gi~~~~--~g~--~~~~g~~~~~~~~~~---------~~~----~~~~~~~~~~~~~g~~~l~va~------------  791 (845)
                      ++.....-  +|.  .+..|+++.+...+.         ++.    ..+.+..++++.+|+|+++||+            
T Consensus        69 Krmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~  148 (170)
T 3gwi_A           69 RRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQR  148 (170)
T ss_dssp             CEEEEEEESSSSEEEEEEEECHHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCG
T ss_pred             CcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCc
Confidence            43322222  132  355677765543221         112    2456677889999999999997            


Q ss_pred             ----CCeEEEEEEeeCC
Q 003131          792 ----DDNLIGVMGIADP  804 (845)
Q Consensus       792 ----~~~~lG~~~~~D~  804 (845)
                          |++|+|+++|-|.
T Consensus       149 ~~E~~L~f~G~~g~~~~  165 (170)
T 3gwi_A          149 ADESDLILEGYIAFLDH  165 (170)
T ss_dssp             GGSCSEEEEEEEEEEC-
T ss_pred             cccCCcEEEehhccccc
Confidence                5689999999885

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=94.06  E-value=0.009  Score=58.06  Aligned_cols=63  Identities=11%  Similarity=0.141  Sum_probs=50.2

Q ss_pred             ccCeEEEEEECCeEEEEEEeeCCCChhHHHH-------HHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          782 SARTGILVAYDDNLIGVMGIADPVKREAAVV-------VEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       782 ~g~~~l~va~~~~~lG~~~~~D~lr~~~~~~-------I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      .+.+.+.+..|+++..--...++.++++++.       |+.|+++|+++.|+||++...+..+++++||.
T Consensus        23 ~~ik~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~   92 (195)
T 3n07_A           23 KQIKLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKALMNAGIEIAIITGRRSQIVENRMKALGIS   92 (195)
T ss_dssp             HTCCEEEECSTTTTSCSCCEECTTSCEECCCCTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCC
T ss_pred             hCCCEEEEcCCCCcCCCcEEEccCchhhheeecccHHHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCc
Confidence            3577888888988765222333344555555       99999999999999999999999999999986

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=93.87  E-value=0.028  Score=55.98  Aligned_cols=57  Identities=14%  Similarity=0.106  Sum_probs=49.0

Q ss_pred             eEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          785 TGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       785 ~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +.+++-.|++++.-   ...+.+++.++|++|++.|++++++||++...+..+++++|+.
T Consensus         6 kli~~DlDGTLl~~---~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~   62 (227)
T 1l6r_A            6 RLAAIDVDGNLTDR---DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGIN   62 (227)
T ss_dssp             CEEEEEHHHHSBCT---TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCC
T ss_pred             EEEEEECCCCCcCC---CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCC
Confidence            45666677777652   5568899999999999999999999999999999999999875

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=93.02  E-value=0.085  Score=50.25  Aligned_cols=61  Identities=7%  Similarity=0.099  Sum_probs=47.5

Q ss_pred             CeEEEEEECCeEEE-EEEeeC------CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          784 RTGILVAYDDNLIG-VMGIAD------PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       784 ~~~l~va~~~~~lG-~~~~~D------~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      .+.+.+-.|++++- -..+..      .+.++..++|+.|++.|+++.++||++...+..+++++|+.
T Consensus         8 ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~   75 (180)
T 1k1e_A            8 IKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK   75 (180)
T ss_dssp             CCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC
T ss_pred             CeEEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCc
Confidence            45667777776542 112211      35678889999999999999999999999999999999985

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=91.99  E-value=0.11  Score=55.98  Aligned_cols=51  Identities=12%  Similarity=0.003  Sum_probs=44.1

Q ss_pred             CeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 003131          793 DNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCV  843 (845)
Q Consensus       793 ~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI  843 (845)
                      +.+.+...-...++|++++.|+.||+.|++|+|+||.....++.+|+++|+
T Consensus       210 g~v~~~~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~  260 (385)
T 4gxt_A          210 GRISIKYFVGIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN  260 (385)
T ss_dssp             CCCEEEEEECCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred             ceeEEeeccCceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence            344445555566899999999999999999999999999999999999975

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=91.67  E-value=0.13  Score=49.51  Aligned_cols=45  Identities=16%  Similarity=0.211  Sum_probs=37.7

Q ss_pred             eEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          794 NLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       794 ~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      ..++.+.+.|.+      +|+.|++.|+++.|+||++...+..+++++||.
T Consensus        42 ~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~   86 (189)
T 3mn1_A           42 SEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIE   86 (189)
T ss_dssp             CEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCS
T ss_pred             cEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCH
Confidence            445555544433      999999999999999999999999999999986

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=90.72  E-value=0.046  Score=52.74  Aligned_cols=63  Identities=11%  Similarity=0.093  Sum_probs=49.3

Q ss_pred             ccCeEEEEEECCeEEEEEEeeCCCChhHHHH-------HHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          782 SARTGILVAYDDNLIGVMGIADPVKREAAVV-------VEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       782 ~g~~~l~va~~~~~lG~~~~~D~lr~~~~~~-------I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      .+.+.+.+-.|+++..--...++..+++++.       |+.|++.|+++.++||++...+..+++++|+.
T Consensus        17 ~~ik~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~   86 (191)
T 3n1u_A           17 KKIKCLICDVDGVLSDGLLHIDNHGNELKSFHVQDGMGLKLLMAAGIQVAIITTAQNAVVDHRMEQLGIT   86 (191)
T ss_dssp             HTCSEEEECSTTTTBCSCCEECTTCCEECCBCHHHHHHHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCC
T ss_pred             hcCCEEEEeCCCCCCCCceeecCCchhhhhccccChHHHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCc
Confidence            3577888888887755222333334555555       99999999999999999999999999999986

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=90.38  E-value=0.2  Score=49.08  Aligned_cols=44  Identities=11%  Similarity=0.189  Sum_probs=37.2

Q ss_pred             EEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          795 LIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       795 ~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      .+..+.+.|.+      +|+.|+++|+++.++||++...+..+++++||.
T Consensus        73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~  116 (211)
T 3ij5_A           73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGIT  116 (211)
T ss_dssp             EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCC
T ss_pred             HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc
Confidence            44555544433      999999999999999999999999999999986

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=89.55  E-value=0.36  Score=47.56  Aligned_cols=41  Identities=29%  Similarity=0.256  Sum_probs=39.2

Q ss_pred             CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      .++|++.+.++.|++.|+++.++||.....+..+++.+|+.
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~  132 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ  132 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999999999985

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=88.80  E-value=0.25  Score=46.69  Aligned_cols=33  Identities=18%  Similarity=0.230  Sum_probs=31.8

Q ss_pred             HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          812 VVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       812 ~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +|+.|+++|+++.++||++...+..+++++||.
T Consensus        47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~   79 (176)
T 3mmz_A           47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP   79 (176)
T ss_dssp             HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC
T ss_pred             HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe
Confidence            899999999999999999999999999999984

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=88.27  E-value=0.36  Score=47.36  Aligned_cols=42  Identities=14%  Similarity=0.166  Sum_probs=39.5

Q ss_pred             CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      -++.|++.++++.|++.|+++.++|+.+...+..+.+.+|+.
T Consensus        85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~  126 (225)
T 1nnl_A           85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIP  126 (225)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCC
Confidence            368999999999999999999999999999999999999985

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=88.11  E-value=0.53  Score=44.78  Aligned_cols=41  Identities=15%  Similarity=0.148  Sum_probs=37.0

Q ss_pred             CCChhHHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCC
Q 003131          804 PVKREAAVVVEGLLKMGVRPVMVTGDN-WRTAHAVAREVCVI  844 (845)
Q Consensus       804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~-~~tA~~iA~~~GI~  844 (845)
                      ++.|++.++|+.|++.|+++.++||-. ...+..+.+.+|+.
T Consensus        68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~  109 (187)
T 2wm8_A           68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF  109 (187)
T ss_dssp             CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred             CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence            578999999999999999999999998 68889999998875

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=87.54  E-value=0.5  Score=43.68  Aligned_cols=61  Identities=15%  Similarity=0.139  Sum_probs=46.9

Q ss_pred             CeEEEEEECCeEEE-EEEe------eCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          784 RTGILVAYDDNLIG-VMGI------ADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       784 ~~~l~va~~~~~lG-~~~~------~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      .+.+.+-.|++++- -..+      ...+.+++.++++.|++.|+++.++||.+...+..+.+++|+.
T Consensus         9 ~k~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~   76 (162)
T 2p9j_A            9 LKLLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVE   76 (162)
T ss_dssp             CCEEEECCTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCC
T ss_pred             eeEEEEecCcceECCceeecCCCceeeeecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCH
Confidence            45666666666541 1111      2234678899999999999999999999999999999999985

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=87.15  E-value=0.43  Score=50.41  Aligned_cols=41  Identities=15%  Similarity=0.191  Sum_probs=39.5

Q ss_pred             CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +++|++.+.++.|++.|+++.|+||+....+..+++++|+.
T Consensus       178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~  218 (335)
T 3n28_A          178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLD  218 (335)
T ss_dssp             CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS
T ss_pred             CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCC
Confidence            78999999999999999999999999999999999999985

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=86.65  E-value=0.11  Score=46.42  Aligned_cols=56  Identities=25%  Similarity=0.264  Sum_probs=42.4

Q ss_pred             eEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          785 TGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       785 ~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +.+.+-.|+++    .-..++.|++.+++++|++.|+++.++|+.+...+..+.+.+|+.
T Consensus         3 k~i~~D~DgtL----~~~~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~   58 (137)
T 2pr7_A            3 RGLIVDYAGVL----DGTDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETN   58 (137)
T ss_dssp             CEEEECSTTTT----SSCHHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHT
T ss_pred             cEEEEecccee----cCCCccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChH
Confidence            44555566665    112346788999999999999999999999888877777777653

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=85.89  E-value=0.13  Score=48.26  Aligned_cols=44  Identities=14%  Similarity=0.180  Sum_probs=36.1

Q ss_pred             CCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH--HcCC
Q 003131          792 DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAR--EVCV  843 (845)
Q Consensus       792 ~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~--~~GI  843 (845)
                      +++.++.+.++|.      .+|+.|++.|+++.|+||+  ..+..+++  ++||
T Consensus        30 ~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi   75 (168)
T 3ewi_A           30 DQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDC   75 (168)
T ss_dssp             SCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCC
T ss_pred             CCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCc
Confidence            4456777777776      3899999999999999999  67788888  6676

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=85.50  E-value=0.5  Score=49.47  Aligned_cols=41  Identities=5%  Similarity=0.046  Sum_probs=39.2

Q ss_pred             CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +++|++.++++.|++.|+++.++||.....+..+.+++|+.
T Consensus       179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~  219 (317)
T 4eze_A          179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLD  219 (317)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS
T ss_pred             EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCC
Confidence            48999999999999999999999999999999999999985

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=85.13  E-value=1.4  Score=41.83  Aligned_cols=63  Identities=10%  Similarity=0.133  Sum_probs=47.2

Q ss_pred             ccCeEEEEEECCeEE-EEEEeeCCC------ChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          782 SARTGILVAYDDNLI-GVMGIADPV------KREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       782 ~g~~~l~va~~~~~l-G~~~~~D~l------r~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      .+.+.+.+-.|+++. +-..+....      ......+|+.|++.|+++.++||++...+..+++++|+.
T Consensus        24 ~~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~   93 (188)
T 2r8e_A           24 ENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKLVEDRCATLGIT   93 (188)
T ss_dssp             HTCSEEEECCCCCCBCSEEEEETTSCEEEEEEHHHHHHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCC
T ss_pred             hcCCEEEEeCCCCcCCCCEEecCCCcEEEEeecccHHHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCc
Confidence            467788888888765 333232211      122235899999999999999999999999999999985

>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}

Probab=84.63  E-value=1.6  Score=40.27  Aligned_cols=48  Identities=27%  Similarity=0.403  Sum_probs=42.0

Q ss_pred             hhhHHHHHHHhcCCCCeeeEEeecCCC---------------eEEEEeCCCCCCHHHHHHHHH
Q 003131          140 AACVNSVEGILRGLPGVKRAVVALATS---------------LGEVEYDPTVISKDDIANAIE  187 (845)
Q Consensus       140 ~~C~~~ie~~l~~~~GV~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i~  187 (845)
                      ++|-|-+|..+.+++||.++.+-++.+               .+.|.|||..++.++|++..=
T Consensus         9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~   71 (168)
T 4gwb_A            9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFF   71 (168)
T ss_dssp             ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHH
T ss_pred             ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHH
Confidence            468888999999999999999887754               789999999999999988663

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=83.52  E-value=0.89  Score=42.01  Aligned_cols=33  Identities=15%  Similarity=0.061  Sum_probs=31.8

Q ss_pred             HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          812 VVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       812 ~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +++.|++.|+++.++||++...+..+++++|+.
T Consensus        39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~   71 (164)
T 3e8m_A           39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVD   71 (164)
T ss_dssp             HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCS
T ss_pred             HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCC
Confidence            899999999999999999999999999999985

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=82.52  E-value=1.2  Score=42.33  Aligned_cols=41  Identities=12%  Similarity=0.279  Sum_probs=33.9

Q ss_pred             CCChhHHHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHcCCC
Q 003131          804 PVKREAAVVVEGLLKMGVRPVMVTGDNW---RTAHAVAREVCVI  844 (845)
Q Consensus       804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~---~tA~~iA~~~GI~  844 (845)
                      ++.|++.++++.|++.|+++.++|+-..   ..+..+-+.+|+.
T Consensus        34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~   77 (189)
T 3ib6_A           34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII   77 (189)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred             eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence            5788999999999999999999997665   7788888888874

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=82.18  E-value=1.1  Score=44.12  Aligned_cols=57  Identities=16%  Similarity=0.191  Sum_probs=47.7

Q ss_pred             eEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          785 TGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       785 ~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +.+++-.|++++.-   ...+.+.+.+++++|++.|+++++.||-....+..+.+++|+.
T Consensus         4 kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~   60 (231)
T 1wr8_A            4 KAISIDIDGTITYP---NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTS   60 (231)
T ss_dssp             CEEEEESTTTTBCT---TSCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCC
T ss_pred             eEEEEECCCCCCCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCC
Confidence            45666677777642   4457899999999999999999999999999999999998874

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=82.02  E-value=1.2  Score=44.29  Aligned_cols=42  Identities=12%  Similarity=0.094  Sum_probs=38.5

Q ss_pred             CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      .++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus       113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~  154 (243)
T 2hsz_A          113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID  154 (243)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred             CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCch
Confidence            357799999999999999999999999999999999999874

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=81.37  E-value=1  Score=49.05  Aligned_cols=41  Identities=20%  Similarity=0.217  Sum_probs=39.7

Q ss_pred             CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +++|++.+.++.|++.|+++.++||.....+..+++.+|+.
T Consensus       256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~  296 (415)
T 3p96_A          256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLD  296 (415)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCS
T ss_pred             ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCcc
Confidence            79999999999999999999999999999999999999985

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=81.28  E-value=1.8  Score=43.67  Aligned_cols=57  Identities=16%  Similarity=0.173  Sum_probs=45.5

Q ss_pred             CeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCC
Q 003131          784 RTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTG---DNWRTAHAVAREVCVI  844 (845)
Q Consensus       784 ~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTG---D~~~tA~~iA~~~GI~  844 (845)
                      .+.+++-.||+++-    .+.+-++++++|++|++.|++++++||   -.........+++|+.
T Consensus         8 ~kli~~DlDGTLl~----~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~   67 (268)
T 3qgm_A            8 KKGYIIDIDGVIGK----SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE   67 (268)
T ss_dssp             CSEEEEECBTTTEE----TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred             CCEEEEcCcCcEEC----CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence            56778888888764    455668999999999999999999999   5666666666777764

>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*

Probab=80.63  E-value=2.2  Score=40.48  Aligned_cols=48  Identities=23%  Similarity=0.304  Sum_probs=41.2

Q ss_pred             hhhHHHHHHHhcCCCCeeeEEeecCCCe-------------------EEEEeCCCCCCHHHHHHHHH
Q 003131          140 AACVNSVEGILRGLPGVKRAVVALATSL-------------------GEVEYDPTVISKDDIANAIE  187 (845)
Q Consensus       140 ~~C~~~ie~~l~~~~GV~~~~v~~~~~~-------------------~~v~~~~~~~~~~~i~~~i~  187 (845)
                      +.|-|-+|..+.+++||.++.+-++.+.                   +.|.|||..++.++|++..=
T Consensus        50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~  116 (199)
T 1fvg_A           50 MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFW  116 (199)
T ss_dssp             ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred             cCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence            4588889999999999999998877653                   89999999999999988653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	845
d1kvja_	79	d.58.17.1 (A:) Menkes copper-transporting ATPase {	2e-21
d1kvja_	79	d.58.17.1 (A:) Menkes copper-transporting ATPase {	2e-18
d1kvja_	79	d.58.17.1 (A:) Menkes copper-transporting ATPase {	3e-04
d2ggpb1	72	d.58.17.1 (B:1-72) Copper transporter domain ccc2a	9e-21
d2ggpb1	72	d.58.17.1 (B:1-72) Copper transporter domain ccc2a	2e-18
d1osda_	72	d.58.17.1 (A:) Mercuric ion binding protein MerP {	3e-20
d1osda_	72	d.58.17.1 (A:) Mercuric ion binding protein MerP {	2e-19
d1p6ta2	79	d.58.17.1 (A:73-151) Potential copper-translocatin	4e-20
d1p6ta2	79	d.58.17.1 (A:73-151) Potential copper-translocatin	6e-19
d1p6ta2	79	d.58.17.1 (A:73-151) Potential copper-translocatin	0.004
d2qifa1	69	d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt	6e-20
d2qifa1	69	d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt	1e-18
d1cpza_	68	d.58.17.1 (A:) Copper chaperone {Enterococcus hira	2e-19
d1cpza_	68	d.58.17.1 (A:) Copper chaperone {Enterococcus hira	7e-19
d1q8la_	84	d.58.17.1 (A:) Menkes copper-transporting ATPase {	3e-19
d1q8la_	84	d.58.17.1 (A:) Menkes copper-transporting ATPase {	1e-16
d1p6ta1	72	d.58.17.1 (A:1-72) Potential copper-translocating	7e-19
d1p6ta1	72	d.58.17.1 (A:1-72) Potential copper-translocating	8e-18
d1p6ta1	72	d.58.17.1 (A:1-72) Potential copper-translocating	0.002
d2aw0a_	72	d.58.17.1 (A:) Menkes copper-transporting ATPase {	8e-19
d2aw0a_	72	d.58.17.1 (A:) Menkes copper-transporting ATPase {	1e-18
d2aw0a_	72	d.58.17.1 (A:) Menkes copper-transporting ATPase {	0.003
d1mwza_	73	d.58.17.1 (A:) Metal ion-transporting ATPase ZntA,	6e-17
d1mwza_	73	d.58.17.1 (A:) Metal ion-transporting ATPase ZntA,	1e-16
d2a29a1	136	d.220.1.1 (A:316-451) Potassium-transporting ATPas	6e-17
d2b8ea2	113	d.220.1.1 (A:435-547) Cation-transporting ATPase {	8e-17
d1sb6a_	64	d.58.17.1 (A:) Copper chaperone {Synechocystis sp.	3e-13
d1sb6a_	64	d.58.17.1 (A:) Copper chaperone {Synechocystis sp.	8e-12
d1qupa2	72	d.58.17.1 (A:2-73) Copper chaperone for superoxide	1e-12
d1qupa2	72	d.58.17.1 (A:2-73) Copper chaperone for superoxide	2e-12
d1fe0a_	66	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	1e-11
d1fe0a_	66	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	7e-11
d1cc8a_	72	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	2e-11
d1cc8a_	72	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	3e-10
d1wpga2	168	c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca	9e-10
d2b8ea1	135	c.108.1.7 (A:416-434,A:548-663) Cation-transportin	2e-08
d1wpga1	115	b.82.7.1 (A:125-239) Calcium ATPase, transduction	4e-06

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.8 bits (215), Expect = 2e-21
 Identities = 23/70 (32%), Positives = 41/70 (58%)

Query: 44  GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNA 103
           G+  + + V GMTC +C  ++E  +  + GV    V+L +  A +++DP L   + ++ A
Sbjct: 6   GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEA 65

Query: 104 IEDAGFEAEI 113
           I+D GF+A I
Sbjct: 66  IDDMGFDAVI 75

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.9 bits (192), Expect = 2e-18
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 132 YTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGF 191
            ++ GMTC +CV ++E  +  + GV    V+L      + YDP + +   +  AI+D GF
Sbjct: 12  ISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGF 71

Query: 192 EAS 194
           +A 
Sbjct: 72  DAV 74

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (89), Expect = 3e-04
 Identities = 12/64 (18%), Positives = 27/64 (42%)

Query: 198 SSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLV 257
           S G + + + V G+ C      +E  +    GV   +         +++DP+  + ++L 
Sbjct: 4   SMGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQ 63

Query: 258 DGIA 261
           + I 
Sbjct: 64  EAID 67

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 84.8 bits (210), Expect = 9e-21
 Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%)

Query: 46  RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIE 105
           R + + V GMTC+AC+N++   L  LKGV K  ++L+ N+  V +D + V  + IK  IE
Sbjct: 2   REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNE-VTADSIKEIIE 60

Query: 106 DAGFEAEILAES 117
           D GF+ EIL +S
Sbjct: 61  DCGFDCEILRDS 72

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 77.9 bits (192), Expect = 2e-18
 Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
           + GMTC+AC N++   LR L GV +  ++L T+  +V YD  V + D I   IED GF+ 
Sbjct: 8   VHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEV-TADSIKEIIEDCGFDC 66

Query: 194 SFVQSS 199
             ++ S
Sbjct: 67  EILRDS 72

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

 Score = 83.2 bits (206), Expect = 3e-20
 Identities = 21/68 (30%), Positives = 37/68 (54%)

Query: 46  RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIE 105
           + + + V GMTC+AC  +V+ A+  ++GV+K  V     +A V FD      + +  A  
Sbjct: 3   QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA 62

Query: 106 DAGFEAEI 113
           DAG+ + +
Sbjct: 63  DAGYPSSV 70

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

 Score = 80.6 bits (199), Expect = 2e-19
 Identities = 19/63 (30%), Positives = 31/63 (49%)

Query: 132 YTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGF 191
            ++ GMTC+AC  +V+  +  + GV +  V   T    V +D    S   +  A  DAG+
Sbjct: 7   LSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGY 66

Query: 192 EAS 194
            +S
Sbjct: 67  PSS 69

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 83.0 bits (205), Expect = 4e-20
 Identities = 22/73 (30%), Positives = 39/73 (53%)

Query: 47  RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIED 106
           + +  + GMTCAAC+N +E  L  ++GVA A V        V ++P      D+K A++ 
Sbjct: 3   KAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDK 62

Query: 107 AGFEAEILAESST 119
            G++ ++  E  +
Sbjct: 63  LGYKLKLKGEQDS 75

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 79.5 bits (196), Expect = 6e-19
 Identities = 24/64 (37%), Positives = 34/64 (53%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
           ++ I GMTCAAC N +E  L  + GV  A V  A     VEY+P   S  D+  A++  G
Sbjct: 5   EFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLG 64

Query: 191 FEAS 194
           ++  
Sbjct: 65  YKLK 68

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 34.9 bits (80), Expect = 0.004
 Identities = 12/60 (20%), Positives = 26/60 (43%)

Query: 202 DKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIA 261
           +K    + G+ C   A+ +E  L+  +GV     +     + V ++P+  S   L + + 
Sbjct: 2   EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD 61

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

 Score = 82.1 bits (203), Expect = 6e-20
 Identities = 27/67 (40%), Positives = 38/67 (56%)

Query: 45  MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAI 104
           M +  + V GM+C  C  +VE ++  L GV+   V L   K DV FD D V  +DI +AI
Sbjct: 1   MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAI 60

Query: 105 EDAGFEA 111
           ED G++ 
Sbjct: 61  EDQGYDV 67

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

 Score = 78.3 bits (193), Expect = 1e-18
 Identities = 23/64 (35%), Positives = 34/64 (53%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
              + GM+C  CV +VE  +  L GV    V L     +V +D   +S  DIA+AIED G
Sbjct: 5   TLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQG 64

Query: 191 FEAS 194
           ++ +
Sbjct: 65  YDVA 68

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

 Score = 80.6 bits (199), Expect = 2e-19
 Identities = 24/66 (36%), Positives = 37/66 (56%)

Query: 49  QVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAG 108
           +  V GM+C  C   +E A+  + GV K  V L + KA V FD   V+  +I  AI + G
Sbjct: 3   EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELG 62

Query: 109 FEAEIL 114
           ++AE++
Sbjct: 63  YQAEVI 68

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

 Score = 79.1 bits (195), Expect = 7e-19
 Identities = 18/66 (27%), Positives = 35/66 (53%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
           ++++ GM+C  CV  +E  +  + GVK+  V L      V++D   +   +I  AI + G
Sbjct: 3   EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELG 62

Query: 191 FEASFV 196
           ++A  +
Sbjct: 63  YQAEVI 68

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.8 bits (199), Expect = 3e-19
 Identities = 25/75 (33%), Positives = 45/75 (60%)

Query: 43  DGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKN 102
            G   +++ V GMTC +C++++EG +  L+GV +  V+L   +A +V+ P L+  E++K 
Sbjct: 6   AGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKK 65

Query: 103 AIEDAGFEAEILAES 117
            IE  GF A +  + 
Sbjct: 66  QIEAMGFPAFVKKQP 80

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.5 bits (180), Expect = 1e-16
 Identities = 25/78 (32%), Positives = 41/78 (52%)

Query: 126 GTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANA 185
           G +V +  + GMTC +C +++EG +  L GV+R  V+L      + Y P +IS +++   
Sbjct: 7   GEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQ 66

Query: 186 IEDAGFEASFVQSSGQDK 203
           IE  GF A   +     K
Sbjct: 67  IEAMGFPAFVKKQPKYLK 84

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 79.4 bits (196), Expect = 7e-19
 Identities = 23/66 (34%), Positives = 35/66 (53%)

Query: 46  RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIE 105
           + I + V+GMTCAAC+  +E  L  + GV  A+V L     +V++DP       I+  IE
Sbjct: 6   KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE 65

Query: 106 DAGFEA 111
             G+  
Sbjct: 66  KLGYHV 71

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 76.3 bits (188), Expect = 8e-18
 Identities = 25/63 (39%), Positives = 30/63 (47%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
              + GMTCAAC   +E  L+ +PGV  A V LAT    V YDP       I   IE  G
Sbjct: 9   AMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLG 68

Query: 191 FEA 193
           +  
Sbjct: 69  YHV 71

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 35.5 bits (82), Expect = 0.002
 Identities = 16/63 (25%), Positives = 30/63 (47%)

Query: 199 SGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVD 258
           S Q +I +QV+G+ C   A  +E  L    GV     +  +  + V++DP    + ++ +
Sbjct: 3   SEQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQE 62

Query: 259 GIA 261
            I 
Sbjct: 63  KIE 65

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.1 bits (195), Expect = 8e-19
 Identities = 24/68 (35%), Positives = 37/68 (54%)

Query: 46  RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIE 105
           +   + + GMTC +C  S+EG +    GV    V+L  +   V +DP L   E ++ AIE
Sbjct: 3   QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE 62

Query: 106 DAGFEAEI 113
           D GF+A +
Sbjct: 63  DMGFDATL 70

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.3 bits (193), Expect = 1e-18
 Identities = 32/61 (52%), Positives = 42/61 (68%)

Query: 134 IGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
           I GMTC +CV S+EG++   PGVK   V+LA S G VEYDP + S + +  AIED GF+A
Sbjct: 9   IDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDA 68

Query: 194 S 194
           +
Sbjct: 69  T 69

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (80), Expect = 0.003
 Identities = 14/59 (23%), Positives = 26/59 (44%)

Query: 203 KILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIA 261
           + ++ + G+ C      +EG++S   GV+  R    +    V +DP   S  +L   I 
Sbjct: 4   ETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE 62

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

 Score = 73.7 bits (181), Expect = 6e-17
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 47  RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIED 106
           R    V+GM CAAC+  VE A+  L GV +  V     K  V  D D      +++A++ 
Sbjct: 4   RYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADND--IRAQVESALQK 61

Query: 107 AGFEAE 112
           AG+   
Sbjct: 62  AGYSLR 67

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

 Score = 72.9 bits (179), Expect = 1e-16
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)

Query: 132 YTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGF 191
           + + GM CAAC   VE  +R L GV +  V  AT    V+ D  +     + +A++ AG+
Sbjct: 7   WKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIR--AQVESALQKAGY 64

Query: 192 EASFVQSS 199
                Q++
Sbjct: 65  SLRDEQAA 72

>d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} Length = 136

class: Alpha and beta proteins (a+b)
fold: Metal cation-transporting ATPase, ATP-binding domain N
superfamily: Metal cation-transporting ATPase, ATP-binding domain N
family: Metal cation-transporting ATPase, ATP-binding domain N
domain: Potassium-transporting ATPase B chain, KdpB
species: Escherichia coli [TaxId: 562]

 Score = 75.9 bits (186), Expect = 6e-17
 Identities = 21/137 (15%), Positives = 46/137 (33%), Gaps = 18/137 (13%)

Query: 674 MDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDV 733
           +D          A  + E P  +++V  A+      +  +     +    +         
Sbjct: 13  VDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQ------- 65

Query: 734 SDFSALPGRGIQCFISGKQVLVGN----RKLLNESGITIPDHVESFVVELEESARTGILV 789
                   R     I  + +  G+    R+ +  +G   P  V+  V ++     T ++V
Sbjct: 66  -------SRMSGINIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVV 118

Query: 790 AYDDNLIGVMGIADPVK 806
                ++GV+ + D VK
Sbjct: 119 VEGSRVLGVIALKDIVK 135

>d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Metal cation-transporting ATPase, ATP-binding domain N
superfamily: Metal cation-transporting ATPase, ATP-binding domain N
family: Metal cation-transporting ATPase, ATP-binding domain N
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 74.8 bits (183), Expect = 8e-17
 Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 25/128 (19%)

Query: 675 DRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVS 734
           D  E L L A AE  SEHP+A+A+V+ A                           L +  
Sbjct: 11  DERELLRLAAIAERRSEHPIAEAIVKKALEHG---------------------IELGEPE 49

Query: 735 DFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDN 794
               + G G+        +LVGN++L+ + G+ + + VE  + +LE  A+T ++VA +  
Sbjct: 50  KVEVIAGEGVV----ADGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGR 105

Query: 795 LIGVMGIA 802
           + G++ ++
Sbjct: 106 VEGIIAVS 113

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

 Score = 63.0 bits (153), Expect = 3e-13
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 48  IQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDA 107
           IQ+ V  + C AC+ +V  A+      A   V L   K  +        +E ++ AI  A
Sbjct: 3   IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALG---EEQLRTAIASA 59

Query: 108 GFEAE 112
           G E E
Sbjct: 60  GHEVE 64

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

 Score = 58.8 bits (142), Expect = 8e-12
 Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 3/63 (4%)

Query: 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAG 190
           Q T+  + C AC  +V   ++         V L +    +      + ++ +  AI  AG
Sbjct: 4   QLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSA---LGEEQLRTAIASAG 60

Query: 191 FEA 193
            E 
Sbjct: 61  HEV 63

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.7 bits (150), Expect = 1e-12
 Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 3/60 (5%)

Query: 54  GMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113
            M C  C N ++  L  + G+   +  + Q    V      V    I N + + G +A I
Sbjct: 13  PMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAPSTIINTLRNCGKDAII 69

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.0 bits (148), Expect = 2e-12
 Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 136 GMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEAS 194
            M C  CVN ++  L+ +PG+      +   +  VE     ++   I N + + G +A 
Sbjct: 13  PMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAPSTIINTLRNCGKDAI 68

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

 Score = 58.3 bits (141), Expect = 1e-11
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 4/61 (6%)

Query: 136 GMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195
            MTC  C  +V  +L  L GVK   + L      +E + ++   D +   ++  G   S+
Sbjct: 8   DMTCGGCAEAVSRVLNKLGGVK-YDIDLPNKKVCIESEHSM---DTLLATLKKTGKTVSY 63

Query: 196 V 196
           +
Sbjct: 64  L 64

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

 Score = 56.4 bits (136), Expect = 7e-11
 Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 4/61 (6%)

Query: 54  GMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113
            MTC  C+ +V   L  L GV K  + L   K  +  +  +   + +   ++  G     
Sbjct: 8   DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSM---DTLLATLKKTGKTVSY 63

Query: 114 L 114
           L
Sbjct: 64  L 64

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.2 bits (141), Expect = 2e-11
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 5/68 (7%)

Query: 45  MRRIQVGVTGMTCAACSNSVEGALMGLK-GVAKASVALLQNKADVVFDPDLVKDEDIKNA 103
           ++  Q  V  MTC+ CS +V   L  L+  V+K  ++L +   DV         + I   
Sbjct: 3   IKHYQFNV-VMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPY---DFILEK 58

Query: 104 IEDAGFEA 111
           I+  G E 
Sbjct: 59  IKKTGKEV 66

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.8 bits (132), Expect = 3e-10
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 4/59 (6%)

Query: 136 GMTCAACVNSVEGILRGLP-GVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193
            MTC+ C  +V  +L  L   V +  ++L   L +V      +  D I   I+  G E 
Sbjct: 11  VMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT---LPYDFILEKIKKTGKEV 66

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 56.3 bits (135), Expect = 9e-10
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)

Query: 785 TGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844
           T ++ + D          DP ++E    ++     G+R +M+TGDN  TA A+ R + + 
Sbjct: 2   TSVICS-DKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIF 60

Query: 845 D 845
            
Sbjct: 61  G 61

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 51.6 bits (123), Expect = 2e-08
 Identities = 21/54 (38%), Positives = 32/54 (59%)

Query: 789 VAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVC 842
           V +D       G  D +K  A   V+ L +MG++  M+TGDNWR+A A++RE+ 
Sbjct: 6   VIFDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN 59

>d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Calcium ATPase, transduction domain A
family: Calcium ATPase, transduction domain A
domain: Calcium ATPase, transduction domain A
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 44.3 bits (104), Expect = 4e-06
 Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 16/104 (15%)

Query: 450 EEREIDALLIQSGDTLKVLPGTKLPADGIVVWG---TSYVNESMVTGEAVPVLKEINSPV 506
             + I A  I  GD ++V  G K+PAD  ++     T  V++S++TGE+V V+K      
Sbjct: 12  SVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVP 71

Query: 507 IGGTINLH-------------GVLHIQATKVGSDAVLSQIISLV 537
               +N               G         G    + +I   +
Sbjct: 72  DPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	845
d1wpga1	115	Calcium ATPase, transduction domain A {Rabbit (Ory	99.89
d2b8ea2	113	Cation-transporting ATPase {Archaeon Archaeoglobus	99.48
d1cpza_	68	Copper chaperone {Enterococcus hirae [TaxId: 1354]	99.46
d2aw0a_	72	Menkes copper-transporting ATPase {Human (Homo sap	99.45
d1osda_	72	Mercuric ion binding protein MerP {Ralstonia metal	99.44
d2ggpb1	72	Copper transporter domain ccc2a {Baker's yeast (Sa	99.43
d2qifa1	69	Copper chaperone {Bacillus subtilis, CopZ [TaxId:	99.42
d1q8la_	84	Menkes copper-transporting ATPase {Human (Homo sap	99.42
d1kvja_	79	Menkes copper-transporting ATPase {Human (Homo sap	99.41
d1p6ta1	72	Potential copper-translocating P-type ATPase CopA	99.4
d1p6ta2	79	Potential copper-translocating P-type ATPase CopA	99.38
d2a29a1	136	Potassium-transporting ATPase B chain, KdpB {Esche	99.38
d1cpza_	68	Copper chaperone {Enterococcus hirae [TaxId: 1354]	99.37
d2qifa1	69	Copper chaperone {Bacillus subtilis, CopZ [TaxId:	99.36
d2aw0a_	72	Menkes copper-transporting ATPase {Human (Homo sap	99.35
d1kvja_	79	Menkes copper-transporting ATPase {Human (Homo sap	99.35
d1osda_	72	Mercuric ion binding protein MerP {Ralstonia metal	99.34
d2ggpb1	72	Copper transporter domain ccc2a {Baker's yeast (Sa	99.33
d1p6ta1	72	Potential copper-translocating P-type ATPase CopA	99.32
d1q8la_	84	Menkes copper-transporting ATPase {Human (Homo sap	99.32
d1p6ta2	79	Potential copper-translocating P-type ATPase CopA	99.27
d1mwza_	73	Metal ion-transporting ATPase ZntA, N-terminal dom	99.25
d1sb6a_	64	Copper chaperone {Synechocystis sp. pcc 6803, Scat	99.17
d1mwza_	73	Metal ion-transporting ATPase ZntA, N-terminal dom	99.14
d1sb6a_	64	Copper chaperone {Synechocystis sp. pcc 6803, Scat	99.12
d1qupa2	72	Copper chaperone for superoxide dismutase, N-termi	99.11
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	99.07
d1fe0a_	66	ATX1 metallochaperone protein (ATOX1) {Human (Homo	99.07
d1cc8a_	72	ATX1 metallochaperone protein (ATOX1) {Baker's yea	99.07
d1qupa2	72	Copper chaperone for superoxide dismutase, N-termi	99.03
d1fe0a_	66	ATX1 metallochaperone protein (ATOX1) {Human (Homo	99.01
d1wpga4	472	Calcium ATPase, transmembrane domain M {Rabbit (Or	98.99
d1cc8a_	72	ATX1 metallochaperone protein (ATOX1) {Baker's yea	98.98
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	98.89
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	98.37
d1q3ia_	214	Sodium/potassium-transporting ATPase alpha chain {	97.72
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	94.24
d1wpga3	239	Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta	92.09
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	87.15
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	84.53
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	84.31

>d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Calcium ATPase, transduction domain A
family: Calcium ATPase, transduction domain A
domain: Calcium ATPase, transduction domain A
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.89  E-value=1.6e-23  Score=182.52  Aligned_cols=98  Identities=24%  Similarity=0.288  Sum_probs=86.2

Q ss_pred             eEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEecc---eeeeccccCCcceeeeccC----------
Q 003131          436 TALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGT---SYVNESMVTGEAVPVLKEI----------  502 (845)
Q Consensus       436 ~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G~---~~Vdes~LTGEs~pv~k~~----------  502 (845)
                      .++|+   |+|+. ..++|++++|+|||||.|++||+|||||+|++++   ..||||+|||||.|+.|.+          
T Consensus         2 ~~kV~---R~g~~-~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~   77 (115)
T d1wpga1           2 MGKVY---RADRK-SVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVN   77 (115)
T ss_dssp             EEEEE---BSSCS-SCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCG
T ss_pred             ceEEE---ECCCc-eEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccc
Confidence            57888   77732 2478999999999999999999999999999755   3599999999999999965          


Q ss_pred             ---CCceeccceeecceEEEEEEEecCccHHHHHHHHH
Q 003131          503 ---NSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLV  537 (845)
Q Consensus       503 ---~~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~  537 (845)
                         .+.+|+||.+.+|.++++|++||.+|.+|+|.+++
T Consensus        78 ~~~~n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i  115 (115)
T d1wpga1          78 QDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM  115 (115)
T ss_dssp             GGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred             ccccceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence               34599999999999999999999999999998764

>d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Metal cation-transporting ATPase, ATP-binding domain N
superfamily: Metal cation-transporting ATPase, ATP-binding domain N
family: Metal cation-transporting ATPase, ATP-binding domain N
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.48  E-value=2.2e-13  Score=118.35  Aligned_cols=113  Identities=31%  Similarity=0.499  Sum_probs=99.8

Q ss_pred             EEEEEEeccCCChhhHHHHHhhhhccCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCc
Q 003131          664 TVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRG  743 (845)
Q Consensus       664 ~v~~~~~~~~~~~~~~~~~~~~~~~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  743 (845)
                      +|+++.+.+. ++++++.+++++|..|+||+++|++++++..+                     .....+.+|+..+|+|
T Consensus         1 eVt~i~~~~~-~e~elL~~aaslE~~S~HPlA~AIv~~a~~~~---------------------~~~~~~~~~~~~~G~G   58 (113)
T d2b8ea2           1 EVTDLVPLNG-DERELLRLAAIAERRSEHPIAEAIVKKALEHG---------------------IELGEPEKVEVIAGEG   58 (113)
T ss_dssp             EEEEEEESSS-CHHHHHHHHHHHTTTCCSHHHHHHHHHHHTTT---------------------CCCCCCSCEEEETTTE
T ss_pred             CceEEEecCC-CHHHHHHHHHHHHCcCCCchHHHHHHHHHHhc---------------------CCCCccccceeeccce
Confidence            4778888764 78999999999999999999999999998763                     2335677899999999


Q ss_pred             eEEEEcCeEEEEeehhhhhhcCCCCChhhHHHHHHHHHccCeEEEEEECCeEEEEEEee
Q 003131          744 IQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIA  802 (845)
Q Consensus       744 i~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~lG~~~~~  802 (845)
                      +++    ..+.+|+++++.+.++.+|+.+++....++.+|+++++++.|++++|++++.
T Consensus        59 i~g----~~v~vG~~~~~~~~~~~~~~~~~~~~~~~~~~G~T~v~va~d~~~~G~iala  113 (113)
T d2b8ea2          59 VVA----DGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVS  113 (113)
T ss_dssp             EEE----TTEEEECHHHHHHTTCCCCHHHHHHHHHHHTTTCEEEEEEETTEEEEEEEEE
T ss_pred             EEe----EEEEECcHHHHHhcCCCCCHHHHHHHHHHHhCCCeEEEEEECCEEEEEEEEC
Confidence            875    4689999999999999999999999999999999999999999999999873

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

Probab=99.46  E-value=6.9e-14  Score=109.52  Aligned_cols=65  Identities=28%  Similarity=0.624  Sum_probs=62.8

Q ss_pred             ccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       131 ~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      .|.|+||+|++|+.+||++|.+++||.++++|+.++++.|+||+..+++++|.+.|+++||++++
T Consensus         3 el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~v   67 (68)
T d1cpza_           3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV   67 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred             EEEECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEE
Confidence            58999999999999999999999999999999999999999999999999999999999999875

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=7.6e-14  Score=110.84  Aligned_cols=68  Identities=47%  Similarity=0.793  Sum_probs=64.9

Q ss_pred             eeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       128 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      ++..|.|+||+|++|+.+||++|.+++||.++++|+.++++.|.|||..+++++|.+.|+++||++.+
T Consensus         3 ~~~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~l   70 (72)
T d2aw0a_           3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATL   70 (72)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSEEEE
T ss_pred             EEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEe
Confidence            34679999999999999999999999999999999999999999999999999999999999999875

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

Probab=99.44  E-value=1.2e-13  Score=109.54  Aligned_cols=68  Identities=28%  Similarity=0.470  Sum_probs=65.3

Q ss_pred             eeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       128 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      +++.|.|+||+|++|+.+||+.|++++||.++++|+.++++.|+||+..+++++|.+.|+++||++.+
T Consensus         3 qt~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~a~v   70 (72)
T d1osda_           3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSV   70 (72)
T ss_dssp             EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence            46789999999999999999999999999999999999999999999999999999999999999975

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.43  E-value=1.4e-13  Score=109.04  Aligned_cols=69  Identities=35%  Similarity=0.641  Sum_probs=64.4

Q ss_pred             eeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeec
Q 003131          128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQ  197 (845)
Q Consensus       128 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~  197 (845)
                      +++.|.|+||+|++|+.+||++|.+++||.++++|+.++++.|.||+. .++++|.+.|+++||++++.+
T Consensus         2 k~v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~-~~~~~i~~~i~~~Gy~a~~~~   70 (72)
T d2ggpb1           2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNE-VTADSIKEIIEDCGFDCEILR   70 (72)
T ss_dssp             EEEEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSS-CCHHHHHHHHHHTTCCCEEEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCC-CCHHHHHHHHHHhCCCeEEcc
Confidence            457899999999999999999999999999999999999999999985 689999999999999998754

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

Probab=99.42  E-value=1.7e-13  Score=107.73  Aligned_cols=67  Identities=34%  Similarity=0.581  Sum_probs=63.6

Q ss_pred             eeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCcee
Q 003131          128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEAS  194 (845)
Q Consensus       128 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~  194 (845)
                      .+.+|.|+||+|++|+.+|+++|++++||.++++|+.++++.|.|||..++.++|.+.|+++||++.
T Consensus         2 ~~~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~~~   68 (69)
T d2qifa1           2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDVA   68 (69)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEEC
T ss_pred             cEEEEEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHHhCCccc
Confidence            3567999999999999999999999999999999999999999999999999999999999999873

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=1.8e-13  Score=111.78  Aligned_cols=73  Identities=33%  Similarity=0.632  Sum_probs=68.3

Q ss_pred             ceeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeecc
Q 003131          126 GTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQS  198 (845)
Q Consensus       126 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~  198 (845)
                      +...+.|+|+||+|++|+++||++|.+++||.++++|+.++++.|.|+|..++.++|.+.|+++||++.+.+.
T Consensus         7 ~~~~v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~~~i~~~I~~~Gy~a~~~~~   79 (84)
T d1q8la_           7 GEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQ   79 (84)
T ss_dssp             SCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCC
T ss_pred             CCEEEEEEECCeEcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCHHHHHHHHHHhCCccEEcCC
Confidence            3467889999999999999999999999999999999999999999999999999999999999999987543

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=2.4e-13  Score=109.91  Aligned_cols=72  Identities=29%  Similarity=0.542  Sum_probs=68.2

Q ss_pred             ceeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeec
Q 003131          126 GTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQ  197 (845)
Q Consensus       126 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~  197 (845)
                      +.+++.+.|+||+|++|+++||++|++++||.++++|+.++++.|.||+..++.++|.+.|+++||++.+..
T Consensus         6 ~~~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~GY~~~~~~   77 (79)
T d1kvja_           6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN   77 (79)
T ss_dssp             TCEEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECS
T ss_pred             CceEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHhcCCCcEeCC
Confidence            467789999999999999999999999999999999999999999999999999999999999999998754

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.40  E-value=2.3e-13  Score=108.01  Aligned_cols=67  Identities=37%  Similarity=0.564  Sum_probs=64.1

Q ss_pred             eeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCce
Q 003131          127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA  193 (845)
Q Consensus       127 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~  193 (845)
                      .+++.|.|+||+|++|+.+||+.|++++||.++++|+.+++++|.||+..++.++|.+.|+++||++
T Consensus         5 ~~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~~~Gy~v   71 (72)
T d1p6ta1           5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV   71 (72)
T ss_dssp             CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred             ceEEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence            3578899999999999999999999999999999999999999999999999999999999999985

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.38  E-value=4.1e-13  Score=108.46  Aligned_cols=69  Identities=35%  Similarity=0.601  Sum_probs=65.7

Q ss_pred             eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeec
Q 003131          129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQ  197 (845)
Q Consensus       129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~  197 (845)
                      +..|.|+||+|++|+.+||+.|.+++||.++.+|+.++++.|.|||..++.++|.+.|+++||++.+..
T Consensus         3 k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   71 (79)
T d1p6ta2           3 KAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG   71 (79)
T ss_dssp             EEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESC
T ss_pred             EEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCHHHHHHHHHHHCCceEECC
Confidence            568999999999999999999999999999999999999999999999999999999999999998744

>d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Metal cation-transporting ATPase, ATP-binding domain N
superfamily: Metal cation-transporting ATPase, ATP-binding domain N
family: Metal cation-transporting ATPase, ATP-binding domain N
domain: Potassium-transporting ATPase B chain, KdpB
species: Escherichia coli [TaxId: 562]

Probab=99.38  E-value=3.4e-12  Score=115.62  Aligned_cols=128  Identities=16%  Similarity=0.210  Sum_probs=100.9

Q ss_pred             EEEEEEeccCCChhhHHHHHhhhhccCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCC-C
Q 003131          664 TVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPG-R  742 (845)
Q Consensus       664 ~v~~~~~~~~~~~~~~~~~~~~~~~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~  742 (845)
                      +++++++.++.++++++.+++++|..|+||+++||+++|++.+........               ............ +
T Consensus         3 q~td~ip~~G~~~~ell~~AA~aE~~SeHPlakAIv~~Ak~~~~~~~~~~~---------------~~~~~~~~~~~~~~   67 (136)
T d2a29a1           3 QASEFIPAQGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQ---------------SLHATFVPFTAQSR   67 (136)
T ss_dssp             EEEEEEECTTCCHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHCCCCCCTT---------------TTTCEEEEEETTTT
T ss_pred             CcceEEeCCCCCHHHHHHHHHHHhCCCCchHHHHHHHHHHHhcCCCccccc---------------cccccccccccccc
Confidence            478999999999999999999999999999999999999876421111000               011111111122 3


Q ss_pred             ceEEEEcCeEEEEeeh----hhhhhcCCCCChhhHHHHHHHHHccCeEEEEEECCeEEEEEEeeCCCC
Q 003131          743 GIQCFISGKQVLVGNR----KLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVK  806 (845)
Q Consensus       743 gi~~~~~g~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~lG~~~~~D~lr  806 (845)
                      +....++|..+.+|+.    +++.+.+..+++++.+....++.+|+++++|+.|++++|++++.|++|
T Consensus        68 ~~g~~~~g~~v~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~~~~G~i~l~D~iK  135 (136)
T d2a29a1          68 MSGINIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVK  135 (136)
T ss_dssp             EEEEEETTEEEEEECHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETTEEEEEEEEEESSC
T ss_pred             eEEEEECCEEEEecHHHHHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEECCEEEEEEEEEeecC
Confidence            4455789999999996    566678889999999999999999999999999999999999999997

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

Probab=99.37  E-value=5.3e-13  Score=104.37  Aligned_cols=65  Identities=37%  Similarity=0.617  Sum_probs=62.1

Q ss_pred             EEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131           49 QVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI  113 (845)
Q Consensus        49 ~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  113 (845)
                      +|.|+||+|++|+.+|+++|++++||.++++|+.++++++.|++...+.+++.++++++||++++
T Consensus         3 el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~v   67 (68)
T d1cpza_           3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV   67 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred             EEEECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEE
Confidence            48999999999999999999999999999999999999999998888999999999999998764

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

Probab=99.36  E-value=9.3e-13  Score=103.36  Aligned_cols=67  Identities=40%  Similarity=0.666  Sum_probs=63.9

Q ss_pred             ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcch
Q 003131           45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA  111 (845)
Q Consensus        45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~  111 (845)
                      |.+.+|.|+||+|++|++.|+++|+++|||.++++|+.++++++.|++...+.+++.+.+++.||++
T Consensus         1 M~~~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~~   67 (69)
T d2qifa1           1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV   67 (69)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred             CcEEEEEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence            4677899999999999999999999999999999999999999999988889999999999999986

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=7.8e-13  Score=104.84  Aligned_cols=68  Identities=35%  Similarity=0.680  Sum_probs=64.4

Q ss_pred             eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131           46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI  113 (845)
Q Consensus        46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  113 (845)
                      ++..|.|+||+|++|++.||++|+++|||.++++|+.++++.+.|++...+++++.++++++||++.+
T Consensus         3 ~~~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~l   70 (72)
T d2aw0a_           3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATL   70 (72)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSEEEE
T ss_pred             EEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEe
Confidence            45679999999999999999999999999999999999999999999889999999999999998864

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1.2e-12  Score=105.76  Aligned_cols=73  Identities=32%  Similarity=0.644  Sum_probs=68.7

Q ss_pred             CCCceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhh
Q 003131           42 GDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEIL  114 (845)
Q Consensus        42 ~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~  114 (845)
                      +.++.++.|.|+||+|++|++.|+++++++|||.++++|+.++++.+.|++...+.+++.++++++||++.+.
T Consensus         4 ~~~~~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~GY~~~~~   76 (79)
T d1kvja_           4 SMGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIH   76 (79)
T ss_dssp             STTCEEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred             CCCceEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHhcCCCcEeC
Confidence            4567889999999999999999999999999999999999999999999988899999999999999998664

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

Probab=99.34  E-value=1.3e-12  Score=103.34  Aligned_cols=68  Identities=31%  Similarity=0.576  Sum_probs=64.7

Q ss_pred             eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131           46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI  113 (845)
Q Consensus        46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  113 (845)
                      +++.|.|+||+|++|++.|++.|+++|||.++.+|+.++++.+.|++...+++++.+.+++.||++++
T Consensus         3 qt~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~a~v   70 (72)
T d1osda_           3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSV   70 (72)
T ss_dssp             EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence            56789999999999999999999999999999999999999999998888999999999999999864

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.33  E-value=1.1e-12  Score=103.93  Aligned_cols=69  Identities=43%  Similarity=0.802  Sum_probs=63.7

Q ss_pred             eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhhc
Q 003131           46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILA  115 (845)
Q Consensus        46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~  115 (845)
                      +++.|.|+||+|++|+++|+++|++++||.++.+|+.++++.+.+++ ..+.+++.+++++.||.+++++
T Consensus         2 k~v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~-~~~~~~i~~~i~~~Gy~a~~~~   70 (72)
T d2ggpb1           2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDN-EVTADSIKEIIEDCGFDCEILR   70 (72)
T ss_dssp             EEEEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECS-SCCHHHHHHHHHHTTCCCEEEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECC-CCCHHHHHHHHHHhCCCeEEcc
Confidence            46789999999999999999999999999999999999999999986 4789999999999999987653

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.32  E-value=2.5e-12  Score=101.89  Aligned_cols=67  Identities=34%  Similarity=0.653  Sum_probs=63.7

Q ss_pred             ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcch
Q 003131           45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA  111 (845)
Q Consensus        45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~  111 (845)
                      .++++|.|+||+|++|+.+|+++++++|||.++++|+.++++++.|++...+.+++.++++++||++
T Consensus         5 ~~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~~~Gy~v   71 (72)
T d1p6ta1           5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV   71 (72)
T ss_dssp             CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred             ceEEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence            3578899999999999999999999999999999999999999999988899999999999999975

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=1.5e-12  Score=106.12  Aligned_cols=74  Identities=34%  Similarity=0.640  Sum_probs=68.2

Q ss_pred             CCCceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhhc
Q 003131           42 GDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILA  115 (845)
Q Consensus        42 ~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~  115 (845)
                      ..+...+.|.|+||+|++|+++|++++.++|||.++++|+.++++.+.|++...+.+++.++++++||++.+..
T Consensus         5 ~~~~~~v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~~~i~~~I~~~Gy~a~~~~   78 (84)
T d1q8la_           5 QAGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKK   78 (84)
T ss_dssp             SSSCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSC
T ss_pred             CCCCEEEEEEECCeEcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCHHHHHHHHHHhCCccEEcC
Confidence            34557788999999999999999999999999999999999999999999988999999999999999987643

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.27  E-value=4.1e-12  Score=102.47  Aligned_cols=69  Identities=30%  Similarity=0.612  Sum_probs=65.3

Q ss_pred             eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhh
Q 003131           46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEIL  114 (845)
Q Consensus        46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~  114 (845)
                      .+..|.|+||+|++|+.+|++.+.+++||.++++|+.++++++.|++...+.+++.++++++||++.+.
T Consensus         2 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~   70 (79)
T d1p6ta2           2 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLK   70 (79)
T ss_dssp             EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEES
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCHHHHHHHHHHHCCceEEC
Confidence            567899999999999999999999999999999999999999999988889999999999999998764

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.25  E-value=7e-12  Score=99.39  Aligned_cols=66  Identities=30%  Similarity=0.488  Sum_probs=61.2

Q ss_pred             eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeee
Q 003131          129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFV  196 (845)
Q Consensus       129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~  196 (845)
                      +++|.|+||+|++|+.+|+++|.+++||.++.+|+.++++.|.+++.  ..++|.+.|+++||++...
T Consensus         4 k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~--~~~~i~~~i~~~GY~v~~~   69 (73)
T d1mwza_           4 RYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADND--IRAQVESALQKAGYSLRDE   69 (73)
T ss_dssp             CEEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSC--CHHHHHHHHHHHTCCCCBC
T ss_pred             EEEEEECCcCCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCC--CHHHHHHHHHHcCCcccCC
Confidence            46899999999999999999999999999999999999999999886  4679999999999998753

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

Probab=99.17  E-value=9.7e-12  Score=95.64  Aligned_cols=61  Identities=21%  Similarity=0.357  Sum_probs=57.4

Q ss_pred             eccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCce
Q 003131          130 GQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA  193 (845)
Q Consensus       130 ~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~  193 (845)
                      ++|.|+||+|++|+.+|+++|++++||.++.+|+.++++.|+++   +++++|.+.|+++||++
T Consensus         3 ~~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~---~~~~~i~~~i~~~GY~v   63 (64)
T d1sb6a_           3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSA---LGEEQLRTAIASAGHEV   63 (64)
T ss_dssp             EEEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESS---SCHHHHHHHHHHHCCCC
T ss_pred             EEEEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccC---CCHHHHHHHHHHcCCCC
Confidence            57999999999999999999999999999999999999999854   67999999999999986

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.14  E-value=4.8e-11  Score=94.45  Aligned_cols=66  Identities=33%  Similarity=0.505  Sum_probs=60.1

Q ss_pred             eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131           46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI  113 (845)
Q Consensus        46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  113 (845)
                      .+.+|.|+||+|++|+..|+++|++++||.++.+|+.++++++.+++.  ..+++.+.++++||.+..
T Consensus         3 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~--~~~~i~~~i~~~GY~v~~   68 (73)
T d1mwza_           3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADND--IRAQVESALQKAGYSLRD   68 (73)
T ss_dssp             CCEEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSC--CHHHHHHHHHHHTCCCCB
T ss_pred             CEEEEEECCcCCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCC--CHHHHHHHHHHcCCcccC
Confidence            456799999999999999999999999999999999999999999654  468999999999998754

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

Probab=99.12  E-value=2.3e-11  Score=93.46  Aligned_cols=63  Identities=30%  Similarity=0.491  Sum_probs=57.9

Q ss_pred             EEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchh
Q 003131           47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE  112 (845)
Q Consensus        47 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~  112 (845)
                      +++|.|+||+|++|+++|+++|++++||.++.+|+.++++++..   ..+++++.+++++.||+++
T Consensus         2 t~~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~---~~~~~~i~~~i~~~GY~ve   64 (64)
T d1sb6a_           2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITS---ALGEEQLRTAIASAGHEVE   64 (64)
T ss_dssp             EEEEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEES---SSCHHHHHHHHHHHCCCCC
T ss_pred             eEEEEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEcc---CCCHHHHHHHHHHcCCCCC
Confidence            46799999999999999999999999999999999999999963   3679999999999999863

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.11  E-value=9.5e-11  Score=92.11  Aligned_cols=64  Identities=25%  Similarity=0.539  Sum_probs=58.9

Q ss_pred             eeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       128 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      .+..|.|+ |+|++|+++|+++|++++||.++.+|+.++++.|+++   .++++|++.|+++||++.+
T Consensus         6 ~~~~f~V~-M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~---~~~~~i~~~I~~~G~~A~l   69 (72)
T d1qupa2           6 YEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAPSTIINTLRNCGKDAII   69 (72)
T ss_dssp             EEEEEECC-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES---SCHHHHHHHHHHTTCCCEE
T ss_pred             EEEEEEEc-cCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEee---CCHHHHHHHHHHhCCCEEE
Confidence            45689995 9999999999999999999999999999999999865   6799999999999999875

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.07  E-value=1.8e-11  Score=109.48  Aligned_cols=58  Identities=36%  Similarity=0.563  Sum_probs=53.6

Q ss_pred             EEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          787 ILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       787 l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      .+++.|++..+.++++|++|++++++|+.||++||+++|+|||++.||.++|++|||+
T Consensus         4 ~~~~~d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~   61 (135)
T d2b8ea1           4 TAVIFDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD   61 (135)
T ss_dssp             CEEEEECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS
T ss_pred             EEEEECCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh
Confidence            3566677777789999999999999999999999999999999999999999999996

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

Probab=99.07  E-value=1.1e-10  Score=89.85  Aligned_cols=61  Identities=25%  Similarity=0.491  Sum_probs=56.4

Q ss_pred             eccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          130 GQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       130 ~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      .+|.| +|+|++|+.+|+++|++++|+ ++.+|+.++++.|+++   .++++|.++|+++||++.+
T Consensus         3 ~ef~V-~M~C~~C~~~I~~aL~~~~gv-~v~v~~~~~~v~V~~~---~~~~~i~~~I~~~Gy~a~l   63 (66)
T d1fe0a_           3 HEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESE---HSMDTLLATLKKTGKTVSY   63 (66)
T ss_dssp             EEEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEES---SCHHHHHHHHHTTTSCEEE
T ss_pred             EEEEE-ccCchHHHHHHHHHHhcCCCc-EEEEEcCCCEEEEEee---CCHHHHHHHHHHhCCeEEE
Confidence            47889 599999999999999999998 5999999999999987   5789999999999999976

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.07  E-value=1.8e-10  Score=90.26  Aligned_cols=65  Identities=28%  Similarity=0.412  Sum_probs=59.4

Q ss_pred             eeeeccccCCccchhhHHHHHHHhcCC-CCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131          127 TIVGQYTIGGMTCAACVNSVEGILRGL-PGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF  195 (845)
Q Consensus       127 ~~~~~~~v~gm~C~~C~~~ie~~l~~~-~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~  195 (845)
                      .+++.|.|+ |+|++|+.+|+++|.++ +||.++.+|+.++++.|..+   +++++|.+.|+++||++.-
T Consensus         3 ~kt~~f~V~-MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~~   68 (72)
T d1cc8a_           3 IKHYQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT---LPYDFILEKIKKTGKEVRS   68 (72)
T ss_dssp             CEEEEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEES---SCHHHHHHHHHTTSSCEEE
T ss_pred             cEEEEEEEC-cCcHHHHHHHHHHHHcCcCceEEEEEECCCCEEEEeec---CCHHHHHHHHHHHCCccCC
Confidence            467789997 99999999999999998 59999999999999999975   6799999999999999873

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.03  E-value=2.8e-10  Score=89.33  Aligned_cols=65  Identities=22%  Similarity=0.376  Sum_probs=59.0

Q ss_pred             ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131           45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI  113 (845)
Q Consensus        45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  113 (845)
                      ..+..|.|+ |+|++|+++|+++|.+++||.++.+|+.++++++..+   .+++++.++|++.||++.+
T Consensus         5 ~~~~~f~V~-M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~---~~~~~i~~~I~~~G~~A~l   69 (72)
T d1qupa2           5 TYEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAPSTIINTLRNCGKDAII   69 (72)
T ss_dssp             CEEEEEECC-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES---SCHHHHHHHHHHTTCCCEE
T ss_pred             cEEEEEEEc-cCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEee---CCHHHHHHHHHHhCCCEEE
Confidence            456789995 9999999999999999999999999999999999753   6799999999999999854

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

Probab=99.01  E-value=2.4e-10  Score=87.90  Aligned_cols=62  Identities=23%  Similarity=0.387  Sum_probs=56.5

Q ss_pred             EEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131           47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI  113 (845)
Q Consensus        47 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  113 (845)
                      +.+|.| +|+|++|+.+|+++|++++|+ ++.+|+.++++++..+   .+++++.++++++||++++
T Consensus         2 k~ef~V-~M~C~~C~~~I~~aL~~~~gv-~v~v~~~~~~v~V~~~---~~~~~i~~~I~~~Gy~a~l   63 (66)
T d1fe0a_           2 KHEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESE---HSMDTLLATLKKTGKTVSY   63 (66)
T ss_dssp             EEEEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEES---SCHHHHHHHHHTTTSCEEE
T ss_pred             CEEEEE-ccCchHHHHHHHHHHhcCCCc-EEEEEcCCCEEEEEee---CCHHHHHHHHHHhCCeEEE
Confidence            467999 599999999999999999998 6999999999999875   5789999999999999865

>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Membrane and cell surface proteins and peptides
fold: Calcium ATPase, transmembrane domain M
superfamily: Calcium ATPase, transmembrane domain M
family: Calcium ATPase, transmembrane domain M
domain: Calcium ATPase, transmembrane domain M
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.99  E-value=1.1e-10  Score=128.82  Aligned_cols=74  Identities=14%  Similarity=0.187  Sum_probs=68.6

Q ss_pred             chHHHHHHHHhhhheeecccccchhhHHHHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCC--CccccCCeEE
Q 003131          592 THFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKT--GTLTQGRATV  665 (845)
Q Consensus       592 ~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKT--GTLT~~~~~v  665 (845)
                      ..+...+..+++++++++|++||++++++++.+.++|+|+|++||+..++|++|+..+.|.|||  +|||.|-+.+
T Consensus       175 ~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v  250 (472)
T d1wpga4         175 RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEV  250 (472)
T ss_dssp             SCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHHH
Confidence            4566778899999999999999999999999999999999999999999999999999999998  9999886554

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.98  E-value=9e-10  Score=86.22  Aligned_cols=65  Identities=29%  Similarity=0.440  Sum_probs=58.9

Q ss_pred             CceEEEEEeCCCCchhhHHHHHHhhhCC-CCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchh
Q 003131           44 GMRRIQVGVTGMTCAACSNSVEGALMGL-KGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE  112 (845)
Q Consensus        44 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~-~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~  112 (845)
                      ++.+..|.|+ |||++|+.+|+++|.++ |||.++.+|+.++++++..+   .+++++.+++++.||++.
T Consensus         2 ~~kt~~f~V~-MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~   67 (72)
T d1cc8a_           2 EIKHYQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT---LPYDFILEKIKKTGKEVR   67 (72)
T ss_dssp             CCEEEEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEES---SCHHHHHHHHHTTSSCEE
T ss_pred             CcEEEEEEEC-cCcHHHHHHHHHHHHcCcCceEEEEEECCCCEEEEeec---CCHHHHHHHHHHHCCccC
Confidence            4577889997 99999999999999998 59999999999999999763   678999999999999874

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.89  E-value=3.2e-10  Score=105.62  Aligned_cols=47  Identities=30%  Similarity=0.448  Sum_probs=43.5

Q ss_pred             EEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          798 VMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       798 ~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      .+...||+|++++++|+.||++||+++|+|||++.||++||+++||.
T Consensus        14 ~~~~~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~   60 (168)
T d1wpga2          14 TTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIF   60 (168)
T ss_dssp             BCCCECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSS
T ss_pred             EEEecCCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCC
Confidence            34444999999999999999999999999999999999999999995

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.37  E-value=2.1e-10  Score=122.86  Aligned_cols=73  Identities=11%  Similarity=0.108  Sum_probs=60.8

Q ss_pred             hHHHHHHHHHccCeEEEEEE------------CCeEEEEEEeeCCCCh--hHHHHHHHHHhCCCeEEEEcCCCHHHHHHH
Q 003131          772 VESFVVELEESARTGILVAY------------DDNLIGVMGIADPVKR--EAAVVVEGLLKMGVRPVMVTGDNWRTAHAV  837 (845)
Q Consensus       772 ~~~~~~~~~~~g~~~l~va~------------~~~~lG~~~~~D~lr~--~~~~~I~~L~~~gi~v~mlTGD~~~tA~~i  837 (845)
                      +.....++..+++|++++++            +....|++..+|++||  +++++|+.||++||+++|+|||+..+|+.+
T Consensus       169 ~~~~~~~~a~~~~r~l~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~i  248 (380)
T d1qyia_         169 LKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVP  248 (380)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHHCSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHH
T ss_pred             HHhHHHHHHHHHHHHHHHhhhcccccccccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence            33445667778888887765            2345788888998654  999999999999999999999999999999


Q ss_pred             HHHcCCC
Q 003131          838 AREVCVI  844 (845)
Q Consensus       838 A~~~GI~  844 (845)
                      ++++||.
T Consensus       249 l~~lgl~  255 (380)
T d1qyia_         249 FENLGLL  255 (380)
T ss_dssp             HHHHTCG
T ss_pred             HHHcCCc
Confidence            9999984

>d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a+b)
fold: Metal cation-transporting ATPase, ATP-binding domain N
superfamily: Metal cation-transporting ATPase, ATP-binding domain N
family: Metal cation-transporting ATPase, ATP-binding domain N
domain: Sodium/potassium-transporting ATPase alpha chain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.72  E-value=1.4e-06  Score=84.34  Aligned_cols=107  Identities=9%  Similarity=0.046  Sum_probs=61.6

Q ss_pred             CCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEEc----Ce--EEEEeehhhhhh
Q 003131          690 SEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFIS----GK--QVLVGNRKLLNE  763 (845)
Q Consensus       690 s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~----g~--~~~~g~~~~~~~  763 (845)
                      .++|.+.||+.++...+....         ....   ........+|++..++.....-.    +.  .+..|+++.+..
T Consensus        64 ~GdptE~ALl~~a~~~~~~~~---------~~r~---~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~  131 (214)
T d1q3ia_          64 AGDASESALLKCIELSCGSVR---------KMRD---RNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILD  131 (214)
T ss_dssp             CSCHHHHHHHHHHHHHHSCHH---------HHHH---TSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHH
T ss_pred             ccChHHHHHHHHHHHhCCCHH---------HHHh---hCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHH
Confidence            469999999999876532100         0000   11123344566655554433321    11  244577665533


Q ss_pred             cC-------C--CCC----hhhHHHHHHHHHccCeEEEEEE------------------------CCeEEEEEEeeCCCC
Q 003131          764 SG-------I--TIP----DHVESFVVELEESARTGILVAY------------------------DDNLIGVMGIADPVK  806 (845)
Q Consensus       764 ~~-------~--~~~----~~~~~~~~~~~~~g~~~l~va~------------------------~~~~lG~~~~~D~lr  806 (845)
                      .+       .  ++.    +.+.+..++++.+|+|++++||                        |++|+|+++|.||||
T Consensus       132 ~C~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR  211 (214)
T d1q3ia_         132 RCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHH  211 (214)
T ss_dssp             TEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCS
T ss_pred             hhhheeeCCceeechHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCC
Confidence            22       1  122    2356677889999999999998                        468999999999999


Q ss_pred             hh
Q 003131          807 RE  808 (845)
Q Consensus       807 ~~  808 (845)
                      ++
T Consensus       212 ~~  213 (214)
T d1q3ia_         212 HH  213 (214)
T ss_dssp             CC
T ss_pred             CC
Confidence            74

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.24  E-value=0.015  Score=55.12  Aligned_cols=41  Identities=15%  Similarity=0.175  Sum_probs=39.3

Q ss_pred             CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +++|++.++|+.||+.|++++++||.....+..+++.+||+
T Consensus        82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~  122 (217)
T d1nnla_          82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIP  122 (217)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred             ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCc
Confidence            47899999999999999999999999999999999999986

>d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Metal cation-transporting ATPase, ATP-binding domain N
superfamily: Metal cation-transporting ATPase, ATP-binding domain N
family: Metal cation-transporting ATPase, ATP-binding domain N
domain: Calcium ATPase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=92.09  E-value=0.14  Score=48.96  Aligned_cols=17  Identities=6%  Similarity=0.135  Sum_probs=14.8

Q ss_pred             CChhHHHHHHHHhhcCc
Q 003131          691 EHPLAKAVVEYARHFHF  707 (845)
Q Consensus       691 ~~p~~~al~~~~~~~~~  707 (845)
                      ++|.+.||+.++...+.
T Consensus        78 G~pTE~ALl~~a~k~g~   94 (239)
T d1wpga3          78 GEATETALTTLVEKMNV   94 (239)
T ss_dssp             SCHHHHHHHHHHHHHCT
T ss_pred             CCCCcHHHHHHHHHhCC
Confidence            78999999999988764

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=87.15  E-value=0.28  Score=45.45  Aligned_cols=41  Identities=10%  Similarity=-0.006  Sum_probs=38.4

Q ss_pred             CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      ++.|++.++++.|++.|+++.++|+.....+..+.+..|+.
T Consensus        88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~  128 (218)
T d1te2a_          88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLR  128 (218)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred             cccchHHHHHHHhhhcccccccccccccccccccccccccc
Confidence            45699999999999999999999999999999999999985

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=84.53  E-value=0.4  Score=44.39  Aligned_cols=40  Identities=13%  Similarity=0.101  Sum_probs=37.9

Q ss_pred             CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          805 VKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       805 lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +.|+++++++.|++.|+++.++|+.....+..+.+++||.
T Consensus        96 l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~  135 (224)
T d2hsza1          96 LYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID  135 (224)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred             hHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCch
Confidence            4799999999999999999999999999999999999985

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=84.31  E-value=0.29  Score=47.22  Aligned_cols=57  Identities=18%  Similarity=0.228  Sum_probs=47.1

Q ss_pred             eEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131          785 TGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI  844 (845)
Q Consensus       785 ~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~  844 (845)
                      +.+++-.|++++.   =.-.+-+++.++|++|++.|++++++||-+...+..+.+++++.
T Consensus         5 Kli~~DlDGTL~~---~~~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~   61 (271)
T d1rkqa_           5 KLIAIDMDGTLLL---PDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHME   61 (271)
T ss_dssp             CEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCC
T ss_pred             eEEEEeCCccccC---CCCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCc
Confidence            4566666777743   13357799999999999999999999999999999999998875