Citrus Sinensis ID: 003283
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 834 | 2.2.26 [Sep-21-2011] | |||||||
| Q5W915 | 600 | UDP-sugar pyrophospharyla | N/A | no | 0.585 | 0.813 | 0.241 | 1e-09 | |
| Q0GZS3 | 614 | UDP-sugar pyrophospharyla | N/A | no | 0.484 | 0.657 | 0.252 | 1e-09 | |
| Q9C5I1 | 614 | UDP-sugar pyrophosphoryla | no | no | 0.658 | 0.894 | 0.225 | 7e-09 | |
| Q09WE7 | 600 | UDP-sugar pyrophosphoryla | no | no | 0.453 | 0.63 | 0.252 | 3e-08 | |
| A2YGP6 | 616 | UDP-sugar pyrophosphoryla | N/A | no | 0.568 | 0.769 | 0.219 | 4e-05 | |
| Q5Z8Y4 | 616 | UDP-sugar pyrophosphoryla | no | no | 0.568 | 0.769 | 0.217 | 8e-05 | |
| Q6GEQ8 | 395 | Probable uridylyltransfer | yes | no | 0.172 | 0.364 | 0.253 | 0.0002 | |
| Q7A0A0 | 395 | Probable uridylyltransfer | yes | no | 0.172 | 0.364 | 0.240 | 0.0008 | |
| Q6G7E3 | 395 | Probable uridylyltransfer | yes | no | 0.172 | 0.364 | 0.240 | 0.0008 | |
| Q7A4A4 | 395 | Probable uridylyltransfer | yes | no | 0.172 | 0.364 | 0.240 | 0.0008 |
| >sp|Q5W915|USP_PEA UDP-sugar pyrophospharylase OS=Pisum sativum GN=USP PE=1 SV=1 | Back alignment and function desciption |
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Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 133/550 (24%), Positives = 212/550 (38%), Gaps = 62/550 (11%)
Query: 221 GGIIGYQVEVLELLAQSKFERKTTKSQHVHESMECQFLEIHVPSGLDLSQNTEYAAQAAL 280
GG++ Y LLA SK VP+G L E +
Sbjct: 61 GGLVAYINNAKRLLADSKAGNNPFDG-----------FTPSVPTGETLKFGDENFNKYEE 109
Query: 281 WGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLY 340
G+ + GG +RLG + LPA G L+ I + A +
Sbjct: 110 AGVREARRAAFVLVAGGLGERLGY--NGIKVALPAETT--TGTCFLQHYIESILALQEAS 165
Query: 341 FKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQ 400
+ G+ I P IMTS + H R L E +FG + L +Q V ++ D +
Sbjct: 166 SEGEGQTHI-PFVIMTSD--DTHGRTLDLLESNSYFGMQPTQVTLLKQEKVACLEDNDAR 222
Query: 401 WLVMRP---FAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLL 457
L + P + KP GHG + L H GI K +++ G K Q +N L
Sbjct: 223 -LALDPQNRYRVQTKPHGHGDVHSLLHSSGILKVWYNAGLKWVLFFQDTN-----GLLFK 276
Query: 458 AL-AGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKF--- 513
A+ + +G+ K+ S A E I + + DG+ + +EY + D
Sbjct: 277 AIPSALGVSSTKQYHVNSLAVPRKAKEAIGGITRLTHSDGRSM--VINVEYNQLDPLLRA 334
Query: 514 -GITRGPFSSNGLQADFPANTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNF 572
G G +S + FP N N L ++L G E + G + Y D
Sbjct: 335 SGYPDGDVNSETGYSPFPGNINQLILEL------GPYIEELAKTGGAIQEFVNPKYKDA- 387
Query: 573 GDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKR 632
T RLEC MQ+ SSR V ++T+ Y V ++A+ K
Sbjct: 388 SKTSFKSSTRLECMMQDYPKTL--PPSSRVGFTV---METWFAYAP---VKNNAEDAAKV 439
Query: 633 ADMSLHQTPDGSFLDILRNAYDILCQCHIKL--PEIEG-NDKYIDDGPPYLILLHPALGL 689
+ + + + I R IL + ++ P ++ N + ++ P I P GL
Sbjct: 440 PKGNPYHSATSGEMAIYRANSLILKKAGFQVADPVLQVINGQEVEVWP--RITWKPKWGL 497
Query: 690 LWEVTRQKFKGG-SVSKGSELQIEVAEFLWRNVQLDGSLIIVA-----ENVMGSTRIADN 743
+ + + K G S+S+ S L I+ + N+ +DG+LI+ A NV GS + +N
Sbjct: 498 TFSLVKSKVSGNCSISQRSTLAIKGRKIFIENLSVDGALIVDAVDDAEVNVSGS--VQNN 555
Query: 744 GESILQYGYR 753
G ++ Y+
Sbjct: 556 GWALEPVDYK 565
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May function as the terminal enzyme of the myo-inositol oxidation (MIO) pathway. May also play a role in the salvage pathway for synthesis of nucleotide sugars. Pisum sativum (taxid: 3888) EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 6EC: 4 |
| >sp|Q0GZS3|USP_CUCME UDP-sugar pyrophospharylase OS=Cucumis melo GN=USP PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9C5I1|USP_ARATH UDP-sugar pyrophosphorylase OS=Arabidopsis thaliana GN=USP PE=1 SV=1 | Back alignment and function description |
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| >sp|Q09WE7|USP1_SOYBN UDP-sugar pyrophosphorylase 1 OS=Glycine max GN=USP1 PE=1 SV=1 | Back alignment and function description |
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| >sp|A2YGP6|USP_ORYSI UDP-sugar pyrophosphorylase OS=Oryza sativa subsp. indica GN=USP PE=3 SV=2 | Back alignment and function description |
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| >sp|Q5Z8Y4|USP_ORYSJ UDP-sugar pyrophosphorylase OS=Oryza sativa subsp. japonica GN=USP PE=2 SV=1 | Back alignment and function description |
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| >sp|Q6GEQ8|URTF_STAAR Probable uridylyltransferase SAR2262 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2262 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q7A0A0|URTF_STAAW Probable uridylyltransferase MW2097 OS=Staphylococcus aureus (strain MW2) GN=MW2097 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q6G7E3|URTF_STAAS Probable uridylyltransferase SAS2072 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2072 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q7A4A4|URTF_STAAN Probable uridylyltransferase SA1974 OS=Staphylococcus aureus (strain N315) GN=SA1974 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 834 | ||||||
| 224109282 | 877 | predicted protein [Populus trichocarpa] | 0.982 | 0.933 | 0.739 | 0.0 | |
| 255574832 | 884 | conserved hypothetical protein [Ricinus | 0.922 | 0.869 | 0.737 | 0.0 | |
| 225448507 | 860 | PREDICTED: uncharacterized protein LOC10 | 0.967 | 0.938 | 0.723 | 0.0 | |
| 147794750 | 866 | hypothetical protein VITISV_024684 [Viti | 0.967 | 0.931 | 0.715 | 0.0 | |
| 356568154 | 857 | PREDICTED: uncharacterized protein LOC10 | 0.968 | 0.942 | 0.705 | 0.0 | |
| 357461351 | 868 | hypothetical protein MTR_3g071440 [Medic | 0.986 | 0.948 | 0.677 | 0.0 | |
| 18410414 | 883 | UDP-glucose pyrophosphorylase 3 [Arabido | 0.984 | 0.929 | 0.669 | 0.0 | |
| 297820348 | 883 | hypothetical protein ARALYDRAFT_486043 [ | 0.985 | 0.930 | 0.662 | 0.0 | |
| 449441288 | 865 | PREDICTED: LOW QUALITY PROTEIN: uncharac | 0.973 | 0.938 | 0.670 | 0.0 | |
| 356539993 | 766 | PREDICTED: uncharacterized protein LOC10 | 0.865 | 0.942 | 0.733 | 0.0 |
| >gi|224109282|ref|XP_002315147.1| predicted protein [Populus trichocarpa] gi|222864187|gb|EEF01318.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 1234 bits (3194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/842 (73%), Positives = 709/842 (84%), Gaps = 23/842 (2%)
Query: 2 SSTTPILHQNNHHQHRLLFSFTSKTTPFHSLHSLHFKRKPLLSFSSSYSASSSSQQHQSI 61
SST +L NN ++ LFSF S F+ SL FK+ S + SSS
Sbjct: 10 SSTNILLRYNNKKRNDFLFSFNS-INLFNK--SLPFKKP---SLHPPLLSLSSSPSKPLT 63
Query: 62 TRVSTAPVEYAPPPPD-FNFHQEISRLKKLRSRLAVSQSLSHKLSVLDSDSRLKNFFNDK 120
TRVS APVEYAPP PD FNFHQEISRL+ LRS+LA S++L+ K SVL+ DSR+K FF
Sbjct: 64 TRVSIAPVEYAPPAPDSFNFHQEISRLQSLRSKLAHSKTLNGKQSVLNDDSRVKRFFK-- 121
Query: 121 HSNYFARVLASLNLD--QLFLIKCVIAAGQEHVLNLEP-EYVESEA----RSDIKSALYA 173
+R L S+NL +LFL+KC++AAGQEHV++LE E VESEA R+ +KSALY+
Sbjct: 122 -IGGVSRFLDSINLTSRELFLLKCLVAAGQEHVVSLEGFELVESEAVESVRTSVKSALYS 180
Query: 174 LVEFIDRLDVNGRNSEAKDAV-----LEIEQVKDLNKLLKTLAEIEQFYDCVGGIIGYQV 228
LVE I+ D++ ++ + + L E++KDL KLLK+L E+E+FYDC+GG+IGYQ+
Sbjct: 181 LVEIIEGFDLSDNGNKGLERINYGENLTDEEIKDLKKLLKSLGEVEEFYDCIGGVIGYQI 240
Query: 229 EVLELLAQSKFERKTTK-SQHVHESMECQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLP 287
VLELL QS F+++TT SQH+ ESMECQFLEIH PSGLDLS+NTEYA+QAALWGIEGLP
Sbjct: 241 MVLELLFQSTFKKQTTNWSQHIKESMECQFLEIHAPSGLDLSKNTEYASQAALWGIEGLP 300
Query: 288 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQ 347
+LGEIYPLGGSADRLGLVD +TGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFK+YGKQ
Sbjct: 301 DLGEIYPLGGSADRLGLVDPDTGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKIYGKQ 360
Query: 348 CITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPF 407
CITPVAIMTSSAKNNHE ITSLCERL WFGRGQSSFQLFEQPLVPA+ AEDGQWLV +PF
Sbjct: 361 CITPVAIMTSSAKNNHEHITSLCERLSWFGRGQSSFQLFEQPLVPAISAEDGQWLVTKPF 420
Query: 408 APVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHG 467
APVCKPGGHG IWKLA+DKGIF+WF+D+ RKGATVRQVSNVVAATDLTLLALAGIGL H
Sbjct: 421 APVCKPGGHGVIWKLAYDKGIFEWFYDHDRKGATVRQVSNVVAATDLTLLALAGIGLRHR 480
Query: 468 KKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQA 527
KKLGFASCKR+SGATEGINVLIEKKNLDG+WAYGLSCIEYTEFDKF IT GP S+NGLQA
Sbjct: 481 KKLGFASCKRNSGATEGINVLIEKKNLDGQWAYGLSCIEYTEFDKFEITGGPCSTNGLQA 540
Query: 528 DFPANTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTM 587
+FPANTNILYVDL S ELV SS NE+SLPGMVLNTKKPIVYMD++G+ HSV GGRLECTM
Sbjct: 541 EFPANTNILYVDLPSLELVASSNNEKSLPGMVLNTKKPIVYMDHYGNCHSVYGGRLECTM 600
Query: 588 QNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLD 647
QNIADNF NTY SRCYKGVED LDTF+VYNERRRVTSSAK+KR+ +D +LHQTPDG+ LD
Sbjct: 601 QNIADNFTNTYLSRCYKGVEDKLDTFIVYNERRRVTSSAKRKRRHSDNTLHQTPDGALLD 660
Query: 648 ILRNAYDILCQCHIKLPEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKFKGGSVSKGS 707
ILRNAYD+L C I+LP+IEGNDKY++ GPP+LI LHPALG LWEVTRQKF GGS+SKGS
Sbjct: 661 ILRNAYDLLSHCDIELPQIEGNDKYVESGPPFLIYLHPALGPLWEVTRQKFNGGSISKGS 720
Query: 708 ELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNK 767
ELQIEVAEF WRNVQLDGSLII+AENVMGSTRI NGE ILQYG RCGRC+L NVKV+NK
Sbjct: 721 ELQIEVAEFSWRNVQLDGSLIIIAENVMGSTRIDPNGEPILQYGNRCGRCRLQNVKVVNK 780
Query: 768 GIDWDCGDNTYWKHDVQWFEALKVILHGNAEFEASDVTLQGNHVFEVPDGHKLKITSGNS 827
GI+W GDN YWKHDVQ FEALKVILHGNAEFEA +VT+QGN +FE+PDG+K+KITSG+S
Sbjct: 781 GINWSFGDNIYWKHDVQRFEALKVILHGNAEFEADNVTIQGNQIFEIPDGYKMKITSGDS 840
Query: 828 GF 829
G
Sbjct: 841 GL 842
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255574832|ref|XP_002528323.1| conserved hypothetical protein [Ricinus communis] gi|223532278|gb|EEF34081.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|225448507|ref|XP_002273020.1| PREDICTED: uncharacterized protein LOC100241552 [Vitis vinifera] gi|297736576|emb|CBI25447.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147794750|emb|CAN60362.1| hypothetical protein VITISV_024684 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356568154|ref|XP_003552278.1| PREDICTED: uncharacterized protein LOC100788781 [Glycine max] | Back alignment and taxonomy information |
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| >gi|357461351|ref|XP_003600957.1| hypothetical protein MTR_3g071440 [Medicago truncatula] gi|355490005|gb|AES71208.1| hypothetical protein MTR_3g071440 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|18410414|ref|NP_567031.1| UDP-glucose pyrophosphorylase 3 [Arabidopsis thaliana] gi|332645948|gb|AEE79469.1| UDP-glucose pyrophosphorylase 3 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297820348|ref|XP_002878057.1| hypothetical protein ARALYDRAFT_486043 [Arabidopsis lyrata subsp. lyrata] gi|297323895|gb|EFH54316.1| hypothetical protein ARALYDRAFT_486043 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|449441288|ref|XP_004138414.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101221986 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356539993|ref|XP_003538476.1| PREDICTED: uncharacterized protein LOC100804343 [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 834 | ||||||
| TAIR|locus:2082038 | 883 | UGP3 "UDP-glucose pyrophosphor | 0.967 | 0.913 | 0.655 | 3.8e-291 | |
| TAIR|locus:2149574 | 614 | USP "UDP-sugar pyrophosphoryla | 0.587 | 0.798 | 0.232 | 2.9e-09 |
| TAIR|locus:2082038 UGP3 "UDP-glucose pyrophosphorylase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 2796 (989.3 bits), Expect = 3.8e-291, P = 3.8e-291
Identities = 543/829 (65%), Positives = 639/829 (77%)
Query: 19 LFSFTSKTTP--FHSLH---SLHFKRKPLLXXXXXXXXXXXXXXXXXITRVSTAPVEYAP 73
LF F + T+P F SLH L F + VST PVEY+
Sbjct: 19 LFHFRTTTSPRSFSSLHFRKPLLFLSSSS-SFSSKLQQSEQQCNNHQVRHVSTVPVEYST 77
Query: 74 P-PPDFN-FHQEISRLKKLRSRLAVSQSLSHKLSVLDSDSRLKNFFNDKHSNYFARVLA- 130
P PP+ + F EI RLK L S+L VS+ L K +V+D+DSR++ FF++ ++V
Sbjct: 78 PTPPESDDFLSEIDRLKSLLSKLDVSKDLRRKDAVIDADSRVRRFFSENRGG-LSKVFGY 136
Query: 131 -SLNLDQLFLIKCVIAAGQEHVL--NLEPEYVESE----ARSDIKSALYALVEFIDRLDV 183
LN +++FL+KCVIAAGQEH L N E + E E RS +K+ALYALVE I+R DV
Sbjct: 137 LGLNSNEMFLVKCVIAAGQEHALCMNYEEAFGEEEEEYTVRSSVKNALYALVEMIERFDV 196
Query: 184 NGRNSEAK---DAVLEIEQVKDLNKLLKTLAEIEQFYDCVGGIIGYQVEVLELLAQSKFE 240
N + + VL+ E++ K L L EIEQFYDC+GGIIGYQV VLELL QS
Sbjct: 197 NSSGYKGRREMGTVLDSEEIAHFRKFLTFLEEIEQFYDCIGGIIGYQVMVLELLHQSSKR 256
Query: 241 RKTTKSQHVHESMECQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSAD 300
R T +SQ V ES+ CQ+LE+H PS LDL+Q +YA+QAALWGIEGLP+LGEIYPLGG+AD
Sbjct: 257 RNTNRSQLVEESLGCQYLEMHTPSVLDLTQEEDYASQAALWGIEGLPDLGEIYPLGGAAD 316
Query: 301 RLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAK 360
RLGL+D ETGECLPAAML +CGRTLLEGLIRDLQAREFLYFKLYGKQC+TPVAIMTS+AK
Sbjct: 317 RLGLIDSETGECLPAAMLAHCGRTLLEGLIRDLQAREFLYFKLYGKQCVTPVAIMTSAAK 376
Query: 361 NNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIW 420
NNHE ++SLCERL+WFGRGQS+F+LFEQPLVPAV AEDGQW+V +PF PV KPGGHG IW
Sbjct: 377 NNHEHVSSLCERLKWFGRGQSNFRLFEQPLVPAVSAEDGQWIVSKPFVPVSKPGGHGVIW 436
Query: 421 KLAHDKGIFKWFHDNGRKGATVRQVSNVVXXXXXXXXXXXGIGLHHGKKLGFASCKRSSG 480
KLA+DKG+F WF+D+GRKGATVRQVSNVV GIGL + KKLGFASCKR++G
Sbjct: 437 KLAYDKGVFNWFYDHGRKGATVRQVSNVVAATDVTLLALAGIGLRYNKKLGFASCKRNAG 496
Query: 481 ATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGIT-RGPFSSNGLQADFPANTNILYVD 539
ATEGINVL+EKKN DGKW YG+SCIEYTEFDKF I+ R P SSNGLQADFPANTNILYVD
Sbjct: 497 ATEGINVLMEKKNFDGKWEYGISCIEYTEFDKFDISNRSP-SSNGLQADFPANTNILYVD 555
Query: 540 LASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYS 599
L SAEL+GSS N +SLP MVLNTKK I Y+D +GD HSV GGRLECTMQNIADNF N +
Sbjct: 556 LHSAELIGSSSNAKSLPNMVLNTKKRIEYLDQYGDYHSVMGGRLECTMQNIADNFFNKFP 615
Query: 600 SRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQC 659
SRC+ +ED LDT++VYNERR+VTSSAKKK+ A +LHQTPDG+ LDILRN YD+L +C
Sbjct: 616 SRCHGSLEDKLDTYIVYNERRKVTSSAKKKKPHASAALHQTPDGALLDILRNGYDLLTEC 675
Query: 660 HIKLPEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKFKGGSVSKGSELQIEVAEFLWR 719
IKLP IE NDKY+D PPYLILLHPALG LWEV+RQKFKGGS+S SELQ+E+AEF W
Sbjct: 676 DIKLPMIEANDKYVDSPPPYLILLHPALGPLWEVSRQKFKGGSISSCSELQLEIAEFSWN 735
Query: 720 NVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNTYW 779
NVQ+DGSLI+ AEN MGST DNGE ILQYG RCG+CKL+NV V+N+GIDW+ N YW
Sbjct: 736 NVQVDGSLIVTAENAMGSTTPNDNGEPILQYGLRCGKCKLHNVNVVNRGIDWNSKSNVYW 795
Query: 780 KHDVQWFEALKVILHGNAEFEASDVTLQGNHVFEVPDGHKLKITSGNSG 828
++DV E K+ILHGNAEFEAS+VT++G+HVFEVPDGHKLKITSGN+G
Sbjct: 796 RNDVNRLETCKIILHGNAEFEASNVTIEGHHVFEVPDGHKLKITSGNAG 844
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| TAIR|locus:2149574 USP "UDP-sugar pyrophosphorylase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | gw1.X.1665.1 | hypothetical protein (811 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
 | estExt_fgenesh4_pg.C_LG_VI1540 | • | • | 0.422 | |||||||
 | estExt_Genewise1_v1.C_LG_IX1928 | • | • | 0.420 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 834 | |||
| PLN02830 | 615 | PLN02830, PLN02830, UDP-sugar pyrophosphorylase | 8e-13 | |
| cd04193 | 323 | cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphoryl | 6e-12 | |
| cd06424 | 315 | cd06424, UGGPase, UGGPase catalyzes the synthesis | 2e-10 | |
| COG4284 | 472 | COG4284, COG4284, UDP-glucose pyrophosphorylase [C | 2e-07 | |
| PTZ00339 | 482 | PTZ00339, PTZ00339, UDP-N-acetylglucosamine pyroph | 8e-05 |
| >gnl|CDD|215444 PLN02830, PLN02830, UDP-sugar pyrophosphorylase | Back alignment and domain information |
|---|
Score = 71.6 bits (176), Expect = 8e-13
Identities = 156/695 (22%), Positives = 246/695 (35%), Gaps = 147/695 (21%)
Query: 105 SVLDSDSRLKNFFNDKHSNYFARVLASLNLDQLFLIKCVIAAGQEHVLNLEPEYVESEAR 164
S L S+ + HSN LA L+ DQ L++ ++ GQ H+ PE
Sbjct: 1 SALSVASKSDSSVPSLHSN-----LALLSPDQRALVRRLLELGQSHLFEHWPE------- 48
Query: 165 SDIKSALYALVEFIDRLDVNGRNSEAKDAVLEIEQVKDLNKLLKTLAEIEQFYDCVGGII 224
G + + K +LE QV L+ + Y GG+
Sbjct: 49 -------------------PGVDDDDKRRLLE--QVARLD----------ESYP--GGLA 75
Query: 225 GYQVEVLELLAQSKFERKTTKSQHVHESMECQFLEIHVPSGLDLSQNT-EYAAQAALWGI 283
Y ELLA SK + V+ VP G L + E+
Sbjct: 76 AYVSNAKELLADSK--------EGVNPFEGW---TPSVPEGEVLEYGSEEFVELEE---- 120
Query: 284 EGLPELGE---IYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQA-REFL 339
GL E G + GG +RLG + LP G L+ I + A +E
Sbjct: 121 AGLREAGNAAFVLVAGGLGERLGYSGIKVA--LPTETA--TGTCYLQLYIESILALQERA 176
Query: 340 YFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDG 399
+ K P+ IMTS + H R L ER +FG L +Q V + D
Sbjct: 177 KKRKAKKGRKIPLVIMTSD--DTHARTLKLLERNDYFGMDPDQVTLLKQEKVACLMDNDA 234
Query: 400 QWLVMRP---FAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTL 456
+ L + P + KP GHG + L + G+ + G+K Q +N +
Sbjct: 235 R-LALDPNDPYKIQTKPHGHGDVHALLYSSGLLDKWLSAGKKWVVFFQDTN--GLVFKAI 291
Query: 457 LALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGIT 516
A G+ G + + R A E I + + + DG+ + +EY + D
Sbjct: 292 PAALGVSATKGFDMNSLAVPRK--AKEAIGAIAKLTHKDGREM--VINVEYNQLDPL--- 344
Query: 517 RGPFSSNG-LQAD---------FPANTNILYVDLAS--AELVGSSENERSLPGMVLNTKK 564
+ G D FP N N L + L EL ++ + V N K
Sbjct: 345 ---LRATGHPDGDVNDETGYSPFPGNINQLILKLGPYVKEL---AKTGGVIEEFV-NPK- 396
Query: 565 PIVYMDNFGDTHSV--PGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRV 622
Y D T + RLEC MQ+ S++ V D ++ Y+ +
Sbjct: 397 ---YKD---ATKTAFKSPTRLECMMQDYPKTL--PPSAKVGFTV---FDNWLAYSPVKNS 445
Query: 623 TSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQ--CHIKLPEIE--GNDKYIDDGPP 678
+ K + + + I IL + ++ P + N ++ GP
Sbjct: 446 PADGAAKVPEG--NPTHSATSGEMAIYGANCLILRKAGADVEEPVEDVVFNGIEVEVGPR 503
Query: 679 YLILLHPALGLLWEVTRQKFKGG--SVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMG 736
I+L PA L + ++K G +S+ S L +E A+ + N+ LDG+L++
Sbjct: 504 --IVLKPAFALTFSELKKKVAPGSVKISQRSTLVLEGADIVIENLSLDGALVVR------ 555
Query: 737 STRIADNGESILQYGYRCGRCKLNNVKVLNKGIDW 771
A G + + ++V NKG W
Sbjct: 556 ----AVPGAEV----------TVGGLRVKNKGWTW 576
|
Length = 615 |
| >gnl|CDD|133036 cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc | Back alignment and domain information |
|---|
| >gnl|CDD|133046 cd06424, UGGPase, UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose | Back alignment and domain information |
|---|
| >gnl|CDD|226734 COG4284, COG4284, UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|240368 PTZ00339, PTZ00339, UDP-N-acetylglucosamine pyrophosphorylase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 834 | |||
| PLN02830 | 615 | UDP-sugar pyrophosphorylase | 100.0 | |
| PLN02435 | 493 | probable UDP-N-acetylglucosamine pyrophosphorylase | 100.0 | |
| PTZ00339 | 482 | UDP-N-acetylglucosamine pyrophosphorylase; Provisi | 100.0 | |
| cd06424 | 315 | UGGPase UGGPase catalyzes the synthesis of UDP-Glu | 100.0 | |
| PLN02474 | 469 | UTP--glucose-1-phosphate uridylyltransferase | 100.0 | |
| KOG2388 | 477 | consensus UDP-N-acetylglucosamine pyrophosphorylas | 100.0 | |
| PF01704 | 420 | UDPGP: UTP--glucose-1-phosphate uridylyltransferas | 100.0 | |
| cd04193 | 323 | UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catala | 100.0 | |
| cd00897 | 300 | UGPase_euk Eukaryotic UGPase catalyses the synthes | 100.0 | |
| KOG2638 | 498 | consensus UDP-glucose pyrophosphorylase [Carbohydr | 100.0 | |
| COG4284 | 472 | UDP-glucose pyrophosphorylase [Carbohydrate transp | 100.0 | |
| cd04180 | 266 | UGPase_euk_like Eukaryotic UGPase-like includes UD | 100.0 | |
| COG1207 | 460 | GlmU N-acetylglucosamine-1-phosphate uridyltransfe | 97.99 | |
| PRK05293 | 380 | glgC glucose-1-phosphate adenylyltransferase; Prov | 97.61 | |
| PRK14352 | 482 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.53 | |
| cd06915 | 223 | NTP_transferase_WcbM_like WcbM_like is a subfamily | 97.52 | |
| PRK00844 | 407 | glgC glucose-1-phosphate adenylyltransferase; Prov | 97.51 | |
| cd02540 | 229 | GT2_GlmU_N_bac N-terminal domain of bacterial GlmU | 97.45 | |
| cd04197 | 217 | eIF-2B_epsilon_N The N-terminal domain of epsilon | 97.43 | |
| PRK14360 | 450 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.42 | |
| cd04189 | 236 | G1P_TT_long G1P_TT_long represents the long form o | 97.4 | |
| cd04181 | 217 | NTP_transferase NTP_transferases catalyze the tran | 97.4 | |
| PRK14356 | 456 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.4 | |
| TIGR02092 | 369 | glgD glucose-1-phosphate adenylyltransferase, GlgD | 97.36 | |
| PRK05450 | 245 | 3-deoxy-manno-octulosonate cytidylyltransferase; P | 97.36 | |
| PRK14359 | 430 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.35 | |
| PRK02862 | 429 | glgC glucose-1-phosphate adenylyltransferase; Prov | 97.3 | |
| PRK15480 | 292 | glucose-1-phosphate thymidylyltransferase RfbA; Pr | 97.29 | |
| PRK14353 | 446 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.22 | |
| cd02509 | 274 | GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransf | 97.2 | |
| PRK14358 | 481 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.18 | |
| cd06426 | 220 | NTP_transferase_like_2 NTP_trnasferase_like_2 is a | 97.14 | |
| PRK14355 | 459 | glmU bifunctional N-acetylglucosamine-1-phosphate | 97.12 | |
| PLN02241 | 436 | glucose-1-phosphate adenylyltransferase | 97.11 | |
| PF00483 | 248 | NTP_transferase: Nucleotidyl transferase This Pros | 97.1 | |
| cd02508 | 200 | ADP_Glucose_PP ADP-glucose pyrophosphorylase is in | 97.06 | |
| cd06422 | 221 | NTP_transferase_like_1 NTP_transferase_like_1 is a | 97.05 | |
| TIGR01173 | 451 | glmU UDP-N-acetylglucosamine diphosphorylase/gluco | 97.04 | |
| PRK00725 | 425 | glgC glucose-1-phosphate adenylyltransferase; Prov | 97.01 | |
| TIGR01207 | 286 | rmlA glucose-1-phosphate thymidylyltransferase, sh | 97.0 | |
| cd02538 | 240 | G1P_TT_short G1P_TT_short is the short form of glu | 97.0 | |
| TIGR01208 | 353 | rmlA_long glucose-1-phosphate thymidylylransferase | 96.9 | |
| cd06425 | 233 | M1P_guanylylT_B_like_N N-terminal domain of the M1 | 96.88 | |
| cd06428 | 257 | M1P_guanylylT_A_like_N N-terminal domain of M1P_gu | 96.81 | |
| cd02517 | 239 | CMP-KDO-Synthetase CMP-KDO synthetase catalyzes th | 96.81 | |
| TIGR02091 | 361 | glgC glucose-1-phosphate adenylyltransferase. This | 96.78 | |
| cd02524 | 253 | G1P_cytidylyltransferase G1P_cytidylyltransferase | 96.78 | |
| PRK14357 | 448 | glmU bifunctional N-acetylglucosamine-1-phosphate | 96.75 | |
| TIGR00454 | 183 | conserved hypothetical protein TIGR00454. At this | 96.75 | |
| PRK13385 | 230 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans | 96.69 | |
| PRK09451 | 456 | glmU bifunctional N-acetylglucosamine-1-phosphate | 96.51 | |
| TIGR02623 | 254 | G1P_cyt_trans glucose-1-phosphate cytidylyltransfe | 96.44 | |
| PF01128 | 221 | IspD: 2-C-methyl-D-erythritol 4-phosphate cytidyly | 96.43 | |
| PLN02728 | 252 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans | 96.43 | |
| COG2266 | 177 | GTP:adenosylcobinamide-phosphate guanylyltransfera | 96.41 | |
| PRK13368 | 238 | 3-deoxy-manno-octulosonate cytidylyltransferase; P | 96.4 | |
| cd04198 | 214 | eIF-2B_gamma_N The N-terminal domain of gamma subu | 96.38 | |
| COG0746 | 192 | MobA Molybdopterin-guanine dinucleotide biosynthes | 96.32 | |
| cd04182 | 186 | GT_2_like_f GT_2_like_f is a subfamily of the glyc | 96.3 | |
| cd02523 | 229 | PC_cytidylyltransferase Phosphocholine cytidylyltr | 96.21 | |
| PRK14354 | 458 | glmU bifunctional N-acetylglucosamine-1-phosphate | 96.21 | |
| TIGR01105 | 297 | galF UTP-glucose-1-phosphate uridylyltransferase, | 96.19 | |
| PRK00560 | 196 | molybdopterin-guanine dinucleotide biosynthesis pr | 96.11 | |
| COG1213 | 239 | Predicted sugar nucleotidyltransferases [Cell enve | 96.08 | |
| cd02513 | 223 | CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N- | 95.99 | |
| PRK10122 | 297 | GalU regulator GalF; Provisional | 95.92 | |
| TIGR01479 | 468 | GMP_PMI mannose-1-phosphate guanylyltransferase/ma | 95.92 | |
| TIGR03310 | 188 | matur_ygfJ molybdenum hydroxylase accessory protei | 95.89 | |
| TIGR02665 | 186 | molyb_mobA molybdopterin-guanine dinucleotide bios | 95.71 | |
| PF12804 | 160 | NTP_transf_3: MobA-like NTP transferase domain; PD | 95.7 | |
| PLN02917 | 293 | CMP-KDO synthetase | 95.66 | |
| cd02503 | 181 | MobA MobA catalyzes the formation of molybdopterin | 95.63 | |
| TIGR00453 | 217 | ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl | 95.51 | |
| cd02516 | 218 | CDP-ME_synthetase CDP-ME synthetase is involved in | 95.45 | |
| PRK02726 | 200 | molybdopterin-guanine dinucleotide biosynthesis pr | 95.38 | |
| PRK00155 | 227 | ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl | 95.35 | |
| TIGR03202 | 190 | pucB xanthine dehydrogenase accessory protein pucB | 95.35 | |
| PRK00317 | 193 | mobA molybdopterin-guanine dinucleotide biosynthes | 95.33 | |
| PRK14490 | 369 | putative bifunctional molybdopterin-guanine dinucl | 95.33 | |
| TIGR01099 | 260 | galU UTP-glucose-1-phosphate uridylyltransferase. | 95.2 | |
| COG1209 | 286 | RfbA dTDP-glucose pyrophosphorylase [Cell envelope | 94.95 | |
| PRK14489 | 366 | putative bifunctional molybdopterin-guanine dinucl | 94.89 | |
| COG1208 | 358 | GCD1 Nucleoside-diphosphate-sugar pyrophosphorylas | 94.63 | |
| cd02541 | 267 | UGPase_prokaryotic Prokaryotic UGPase catalyses th | 94.41 | |
| PRK14500 | 346 | putative bifunctional molybdopterin-guanine dinucl | 94.36 | |
| COG1211 | 230 | IspD 4-diphosphocytidyl-2-methyl-D-erithritol synt | 94.33 | |
| PRK09382 | 378 | ispDF bifunctional 2-C-methyl-D-erythritol 4-phosp | 94.02 | |
| cd04183 | 231 | GT2_BcE_like GT2_BcbE_like is likely involved in t | 93.61 | |
| TIGR00466 | 238 | kdsB 3-deoxy-D-manno-octulosonate cytidylyltransfe | 93.35 | |
| cd02507 | 216 | eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma | 93.27 | |
| COG0448 | 393 | GlgC ADP-glucose pyrophosphorylase [Carbohydrate t | 92.95 | |
| PRK13389 | 302 | UTP--glucose-1-phosphate uridylyltransferase subun | 92.1 | |
| KOG1322 | 371 | consensus GDP-mannose pyrophosphorylase/mannose-1- | 90.99 | |
| cd02518 | 233 | GT2_SpsF SpsF is a glycosyltrnasferase implicated | 90.13 | |
| PRK15460 | 478 | cpsB mannose-1-phosphate guanyltransferase; Provis | 89.96 | |
| COG0836 | 333 | {ManC} Mannose-1-phosphate guanylyltransferase [Ce | 83.88 | |
| TIGR03584 | 222 | PseF pseudaminic acid CMP-transferase. The sequenc | 81.63 |
| >PLN02830 UDP-sugar pyrophosphorylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-123 Score=1071.72 Aligned_cols=584 Identities=24% Similarity=0.318 Sum_probs=521.1
Q ss_pred chhHHhhccCCccHHHHHHHHHHcCCccccccCccchhhhhhhhhHHHHHHHHHhhhhccccCCCcccccccc--chhhH
Q 003283 123 NYFARVLASLNLDQLFLIKCVIAAGQEHVLNLEPEYVESEARSDIKSALYALVEFIDRLDVNGRNSEAKDAVL--EIEQV 200 (834)
Q Consensus 123 ~~~~~~~~~l~~~~~~l~~~L~~~gQ~Hll~~~~~w~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~~~~~ 200 (834)
++|+++++.|++++++|+++|.++||+|||++ |++ | +++
T Consensus 14 ~~~~~~~~~~~~~~~~l~~~L~~~gQ~HL~~~---w~~----------------------------------l~~~~~-- 54 (615)
T PLN02830 14 PSLHSNLALLSPDQRALVRRLLELGQSHLFEH---WPE----------------------------------PGVDDD-- 54 (615)
T ss_pred cccccccccCChhHHHHHHHHHHcCcHHHHhh---hhc----------------------------------cCCCHH--
Confidence 68999999999999999999999999999999 665 3 444
Q ss_pred HHHHHHHHHHHHHhccccCcchhHHHHHHHHHHHHccccccccccccccccccccccccc-c-CCCCcccCCChHHHHHH
Q 003283 201 KDLNKLLKTLAEIEQFYDCVGGIIGYQVEVLELLAQSKFERKTTKSQHVHESMECQFLEI-H-VPSGLDLSQNTEYAAQA 278 (834)
Q Consensus 201 ~~~~~Ll~qL~~ld~~y~~~ggl~~y~~~a~~ll~~s~~~~~~~~~~~~~~~~~~~~~~~-~-vP~g~~l~~~~~~~~~~ 278 (834)
+|++|++||..+|..|| ||+.+|+.++.+++.++.. +. ++++.+ + +|.+..+++++....+|
T Consensus 55 -e~~~L~~qL~~ld~~y~--g~l~~~~~~~~~~l~~s~~--~~-----------~~~~~i~P~vp~~~~~~~~~~~~~~~ 118 (615)
T PLN02830 55 -DKRRLLEQVARLDESYP--GGLAAYVSNAKELLADSKE--GV-----------NPFEGWTPSVPEGEVLEYGSEEFVEL 118 (615)
T ss_pred -HHHHHHHHHHhcccccc--chHHHHHHHHHHHHhhccc--CC-----------CchhhcccCCCccccccccchhhhHH
Confidence 89999999999999995 9999999999999986521 11 233443 4 58887777766666778
Q ss_pred HHHhhhccCcEEEEEecCCccccCCCCCCCCCceeeccccCCCCCcchHHHHHHHHHHHHHhHhhcC-CcccceEEEecC
Q 003283 279 ALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYG-KQCITPVAIMTS 357 (834)
Q Consensus 279 ~~~Gle~L~kvavVlLAGGlGTRLG~~~pKgg~~lpV~l~p~sgkTlLql~~e~I~~lq~La~k~~g-~~~~IPl~IMTS 357 (834)
+++|+++|+|+|||+||||||||||+++||+ +|||++. +|+||||++++||+++|++|.++.+ ..+.||||||||
T Consensus 119 ~~~Gl~~l~kvavllLaGGlGTRLG~~~pK~--~lpv~~~--~gkt~lql~~e~I~~lq~la~~~~~~~~~~IPl~IMTS 194 (615)
T PLN02830 119 EEAGLREAGNAAFVLVAGGLGERLGYSGIKV--ALPTETA--TGTCYLQLYIESILALQERAKKRKAKKGRKIPLVIMTS 194 (615)
T ss_pred HHHHHHHhCcEEEEEecCCcccccCCCCCCc--ceecccC--CCCcHHHHHHHHHHHHHHHHHHhcccCCCCceEEEECC
Confidence 8999999999999999999999999999999 9999865 9999999999999999999977554 568999999999
Q ss_pred CCCCchHHHHHHHHHhCCCCCCCCceEEEecCCeeeEecCCCcccccC--CCCccccCCCCcHHHHHHHhcCchHHHHHc
Q 003283 358 SAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMR--PFAPVCKPGGHGAIWKLAHDKGIFKWFHDN 435 (834)
Q Consensus 358 ~~~~Th~~T~~fle~n~yFGl~~~qV~~F~Q~~vP~l~~~dgki~l~~--~~~i~~~P~GHGdIy~aL~~sGlLd~l~~~ 435 (834)
+ +||++|++||++|+|||++++||+||+|+++||+++++|++++++ +++++|+||||||||+||+++|+||+|+++
T Consensus 195 ~--~T~~~T~~~~~~n~~FGl~~~~v~~F~Q~~~P~~~~~~g~~~l~~~d~~~i~~~P~GhGdi~~aL~~sGlLd~l~~~ 272 (615)
T PLN02830 195 D--DTHARTLKLLERNDYFGMDPDQVTLLKQEKVACLMDNDARLALDPNDPYKIQTKPHGHGDVHALLYSSGLLDKWLSA 272 (615)
T ss_pred c--chhHHHHHHHHHCCccCCCccceEEEEcCcceeEecCCCcccccCCCCCccccCCCCccHHHHHHHHCCCHHHHHHc
Confidence 9 899999999999999999999999999999999998889999987 889999999999999999999999999999
Q ss_pred CceEEEEEeCCCCcccc-cHhHHHHhhhhhhcCCceeEEEeeecCCCCcCceEEEEeecCCCccccceEEEEecccCccC
Q 003283 436 GRKGATVRQVSNVVAAT-DLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFG 514 (834)
Q Consensus 436 Gikyi~v~~vDN~La~v-DP~~l~flG~~~~~~~~~~~~~vvRK~~~~ekvGvL~~~~~~dGk~~~~~~vVEYsEl~~~~ 514 (834)
|+||+|||||||+|+++ ||.| +|||+.++++|++++|+| .++|++|++|+.++.||++ +++||||+|++++.
T Consensus 273 G~~yi~v~~vDN~L~~~Adp~f---lG~~~~~~~d~~~kvv~K--~~~E~vGvi~~~~~~dG~~--l~~vVEYse~~~ll 345 (615)
T PLN02830 273 GKKWVVFFQDTNGLVFKAIPAA---LGVSATKGFDMNSLAVPR--KAKEAIGAIAKLTHKDGRE--MVINVEYNQLDPLL 345 (615)
T ss_pred CCEEEEEEeccchhhhcccHHH---hHHHHhcCCceEEEEEEC--CCCcccceEEEEecCCCCe--eeEEEeecccCHHH
Confidence 99999999999999998 9855 899999999999998655 4689999999866788874 56999999999883
Q ss_pred ----CCCCCCCCCCccccCccceeeeEEeHHHHHhhhcccccCCccccccccCCCcceecCCCCccccCcceeccchhhh
Q 003283 515 ----ITRGPFSSNGLQADFPANTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNI 590 (834)
Q Consensus 515 ----~~~~~~~dg~l~s~f~~Ninnl~fsL~~L~~vl~~~~~~~Lp~hIanpKKkIpy~D~~g~~~~~~p~rLE~~Mqdi 590 (834)
.++++..+++++|.|||||||||++|++|++++++ +.+.||++ +||| |+|.++ +.++.++|||||||||
T Consensus 346 ~~a~~p~g~l~~~~~~s~FPgNtN~L~v~L~a~~~~l~~-~~~~lp~i-vNpK----~~d~~~-~v~q~~trle~~mq~f 418 (615)
T PLN02830 346 RATGHPDGDVNDETGYSPFPGNINQLILKLGPYVKELAK-TGGVIEEF-VNPK----YKDATK-TAFKSPTRLECMMQDY 418 (615)
T ss_pred HhccCCCcccccccccccCCCCceeeEeeHHHHHHHHHh-CCCcccee-ccCc----ccCCCC-ceeecchHHHHHHHHH
Confidence 35566777888999999999999999999999986 78899985 5999 999774 5788999999999999
Q ss_pred hhhhccccccccccceeeecccceeeeeccCCCchhhhhccccCCCCCCChhhhHHHHHHHHHHHHHHCCcccCccc---
Q 003283 591 ADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHIKLPEIE--- 667 (834)
Q Consensus 591 ~~~F~~~y~~~~~~~~f~~~~R~~~FsPvKn~~~sa~k~~~~~~~~~~~sp~ta~~dl~~~~~~~L~~aG~~v~~~~--- 667 (834)
++.|. ...++||+++++|.+|+||||++.+|+++...+ ++ .+||+++++|+|++++++|+.+|+.+.++.
T Consensus 419 ~~~~~-----~~~~vg~~v~~~~~~f~PVKn~~s~a~~k~~~~-~~-~~~~~s~e~d~y~~~~llL~~s~~~~~~~~~~~ 491 (615)
T PLN02830 419 PKTLP-----PSAKVGFTVFDNWLAYSPVKNSPADGAAKVPEG-NP-THSATSGEMAIYGANCLILRKAGADVEEPVEDV 491 (615)
T ss_pred hhhcC-----cccccCceecCchheeccccCChHHhhhhcccC-CC-ccCcchhhHHHHHHHHHHHHhcCCccccCcccc
Confidence 99985 456799999999999999999999998888765 44 459999999999999999999888776443
Q ss_pred -CCCcccccCCCeEEEeCCCccccHHHHhccc-CC-CCCCCCcEEEEEeceEEeeceEEEEEEEEEecCCCCCccccCCC
Q 003283 668 -GNDKYIDDGPPYLILLHPALGLLWEVTRQKF-KG-GSVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNG 744 (834)
Q Consensus 668 -~~~~~~~~~P~~~I~L~P~~~~~~~~~~~k~-~~-gsi~~~S~L~VeG~~~f~~~v~ldGslvI~a~~~~g~~~~~~~g 744 (834)
.++.++..+|+ |.|+|+|+++|+++++|| ++ ++|+++|+|+|+|+++||+||+|||+|+|.|.. |+
T Consensus 492 ~~~~~~~~~~P~--I~L~p~f~~~~~~~~~k~~~~~~si~~~s~L~v~G~~~~~~~v~LdG~viI~a~~--~~------- 560 (615)
T PLN02830 492 VFNGIEVEVGPR--IVLKPAFALTFSELKKKVAPGSVKISQRSTLVLEGADIVIENLSLDGALVVRAVP--GA------- 560 (615)
T ss_pred ccCCcccCCCCe--EEECchhhhHHHHHHHHhcCCCCcccCCCeEEEEeeeEEecCeEEEEEEEEEcCC--CC-------
Confidence 56888888996 999999999999999999 76 699999999999999999999999999999994 33
Q ss_pred ccceecccccceEEEeeeEEeeCceeeecCCCCCCcccceeeeeEEEEEecceeeEecceeEecceEEEec
Q 003283 745 ESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNTYWKHDVQWFEALKVILHGNAEFEASDVTLQGNHVFEVP 815 (834)
Q Consensus 745 ~~i~~~~~~~g~~~l~~~~V~N~G~~~~~~~~~~~~~e~~r~~~~~i~~~~~~ef~a~~v~~~g~~~~~vp 815 (834)
+|+|+|++|+|+||+|++++.+...+|+.|||||+|+++|+.|+..+. +..|+||
T Consensus 561 -----------~~~i~g~~v~N~g~~~~~~~~~~~~~~~~~irg~~~~~~e~~~~~~~~-----~g~~~~~ 615 (615)
T PLN02830 561 -----------EVTVGGLRVKNKGWTWEPVDKGTSAPEEIRIRGFVIKKVETAELVFDK-----PGKYTVP 615 (615)
T ss_pred -----------eEEecCeEEecCCcEEEecCCCCCcchhhhhcceeEeeeeeEEEEecC-----CCceeCC
Confidence 789999999999999999985457899999999999999999999887 5666654
|
|
| >PLN02435 probable UDP-N-acetylglucosamine pyrophosphorylase | Back alignment and domain information |
|---|
| >PTZ00339 UDP-N-acetylglucosamine pyrophosphorylase; Provisional | Back alignment and domain information |
|---|
| >cd06424 UGGPase UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose | Back alignment and domain information |
|---|
| >PLN02474 UTP--glucose-1-phosphate uridylyltransferase | Back alignment and domain information |
|---|
| >KOG2388 consensus UDP-N-acetylglucosamine pyrophosphorylase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >PF01704 UDPGP: UTP--glucose-1-phosphate uridylyltransferase; InterPro: IPR002618 This family consists of UTP--glucose-1-phosphate uridylyltransferases (2 | Back alignment and domain information |
|---|
| >cd04193 UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc | Back alignment and domain information |
|---|
| >cd00897 UGPase_euk Eukaryotic UGPase catalyses the synthesis of UDP-Glucose | Back alignment and domain information |
|---|
| >KOG2638 consensus UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >COG4284 UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd04180 UGPase_euk_like Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes | Back alignment and domain information |
|---|
| >COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK05293 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases | Back alignment and domain information |
|---|
| >PRK00844 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU | Back alignment and domain information |
|---|
| >cd04197 eIF-2B_epsilon_N The N-terminal domain of epsilon subunit of the eIF-2B is a subfamily of glycosyltransferase 2 | Back alignment and domain information |
|---|
| >PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd04189 G1P_TT_long G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase | Back alignment and domain information |
|---|
| >cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars | Back alignment and domain information |
|---|
| >PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR02092 glgD glucose-1-phosphate adenylyltransferase, GlgD subunit | Back alignment and domain information |
|---|
| >PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK02862 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK15480 glucose-1-phosphate thymidylyltransferase RfbA; Provisional | Back alignment and domain information |
|---|
| >PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose | Back alignment and domain information |
|---|
| >PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd06426 NTP_transferase_like_2 NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family | Back alignment and domain information |
|---|
| >PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PLN02241 glucose-1-phosphate adenylyltransferase | Back alignment and domain information |
|---|
| >PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry | Back alignment and domain information |
|---|
| >cd02508 ADP_Glucose_PP ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch | Back alignment and domain information |
|---|
| >cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family | Back alignment and domain information |
|---|
| >TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase | Back alignment and domain information |
|---|
| >PRK00725 glgC glucose-1-phosphate adenylyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR01207 rmlA glucose-1-phosphate thymidylyltransferase, short form | Back alignment and domain information |
|---|
| >cd02538 G1P_TT_short G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase | Back alignment and domain information |
|---|
| >TIGR01208 rmlA_long glucose-1-phosphate thymidylylransferase, long form | Back alignment and domain information |
|---|
| >cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins | Back alignment and domain information |
|---|
| >cd06428 M1P_guanylylT_A_like_N N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase | Back alignment and domain information |
|---|
| >cd02517 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide | Back alignment and domain information |
|---|
| >TIGR02091 glgC glucose-1-phosphate adenylyltransferase | Back alignment and domain information |
|---|
| >cd02524 G1P_cytidylyltransferase G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose | Back alignment and domain information |
|---|
| >PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR00454 conserved hypothetical protein TIGR00454 | Back alignment and domain information |
|---|
| >PRK13385 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR02623 G1P_cyt_trans glucose-1-phosphate cytidylyltransferase | Back alignment and domain information |
|---|
| >PF01128 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro: IPR001228 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, a bacterial ispD protein, catalyzes the third step of the deoxyxylulose-5-phosphate pathway (DXP) of isoprenoid biosynthesis; the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate [] | Back alignment and domain information |
|---|
| >PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | Back alignment and domain information |
|---|
| >COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PRK13368 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd04198 eIF-2B_gamma_N The N-terminal domain of gamma subunit of the eIF-2B is a subfamily of glycosyltransferase 2 | Back alignment and domain information |
|---|
| >COG0746 MobA Molybdopterin-guanine dinucleotide biosynthesis protein A [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function | Back alignment and domain information |
|---|
| >cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline | Back alignment and domain information |
|---|
| >PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR01105 galF UTP-glucose-1-phosphate uridylyltransferase, non-catalytic GalF subunit | Back alignment and domain information |
|---|
| >PRK00560 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional | Back alignment and domain information |
|---|
| >COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >cd02513 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety | Back alignment and domain information |
|---|
| >PRK10122 GalU regulator GalF; Provisional | Back alignment and domain information |
|---|
| >TIGR01479 GMP_PMI mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | Back alignment and domain information |
|---|
| >TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family | Back alignment and domain information |
|---|
| >TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial | Back alignment and domain information |
|---|
| >PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B | Back alignment and domain information |
|---|
| >PLN02917 CMP-KDO synthetase | Back alignment and domain information |
|---|
| >cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide | Back alignment and domain information |
|---|
| >TIGR00453 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | Back alignment and domain information |
|---|
| >cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production | Back alignment and domain information |
|---|
| >PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional | Back alignment and domain information |
|---|
| >PRK00155 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Reviewed | Back alignment and domain information |
|---|
| >TIGR03202 pucB xanthine dehydrogenase accessory protein pucB | Back alignment and domain information |
|---|
| >PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed | Back alignment and domain information |
|---|
| >PRK14490 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MobA; Provisional | Back alignment and domain information |
|---|
| >TIGR01099 galU UTP-glucose-1-phosphate uridylyltransferase | Back alignment and domain information |
|---|
| >COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK14489 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional | Back alignment and domain information |
|---|
| >COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >cd02541 UGPase_prokaryotic Prokaryotic UGPase catalyses the synthesis of UDP-glucose | Back alignment and domain information |
|---|
| >PRK14500 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MoaC/MobA; Provisional | Back alignment and domain information |
|---|
| >COG1211 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism] | Back alignment and domain information |
|---|
| >PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional | Back alignment and domain information |
|---|
| >cd04183 GT2_BcE_like GT2_BcbE_like is likely involved in the biosynthesis of the polysaccharide capsule | Back alignment and domain information |
|---|
| >TIGR00466 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase | Back alignment and domain information |
|---|
| >cd02507 eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma_like is predicted to have glycosyltransferase activity | Back alignment and domain information |
|---|
| >COG0448 GlgC ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK13389 UTP--glucose-1-phosphate uridylyltransferase subunit GalU; Provisional | Back alignment and domain information |
|---|
| >KOG1322 consensus GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >cd02518 GT2_SpsF SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat | Back alignment and domain information |
|---|
| >PRK15460 cpsB mannose-1-phosphate guanyltransferase; Provisional | Back alignment and domain information |
|---|
| >COG0836 {ManC} Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >TIGR03584 PseF pseudaminic acid CMP-transferase | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 834 | ||||
| 3oc9_A | 405 | Crystal Structure Of Putative Udp-N-Acetylglucosami | 5e-07 | ||
| 1jv1_A | 505 | Crystal Structure Of Human Agx1 Complexed With Udpg | 8e-04 | ||
| 1jvd_A | 522 | Crystal Structure Of Human Agx2 Complexed With Udpg | 8e-04 |
| >pdb|3OC9|A Chain A, Crystal Structure Of Putative Udp-N-Acetylglucosamine Pyrophosphorylase From Entamoeba Histolytica Length = 405 | Back alignment and structure |
|
| >pdb|1JV1|A Chain A, Crystal Structure Of Human Agx1 Complexed With Udpglcnac Length = 505 | Back alignment and structure |
| >pdb|1JVD|A Chain A, Crystal Structure Of Human Agx2 Complexed With Udpglcnac Length = 522 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A* Length = 630 | Back alignment and structure |
|---|
Score = 211 bits (537), Expect = 6e-59
Identities = 102/630 (16%), Positives = 171/630 (27%), Gaps = 100/630 (15%)
Query: 195 LEIEQVKDLNKLLKTLAEIEQFYDCVGGIIGYQVEVLELLAQSKFERKTTKSQHVHESME 254
E + LL L Y GG+ Y ELLA+ E +
Sbjct: 33 TVDECNERQIALLTDLYMFSNMY--PGGVAQYIRNGHELLARESEEVDFAALEMPPL--- 87
Query: 255 CQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLP 314
+ L + T G L + + GG +RLG + +
Sbjct: 88 -------IFEAPSLHRRTAERTALENAGTAMLCKTVFVLVAGGLGERLGYSSIKVSLPVE 140
Query: 315 AAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLR 374
A T L +R Q ++ GK+ P IMTS + H+R L LR
Sbjct: 141 TAT----NTTYLAYYLRWAQ-------RVGGKE--VPFVIMTSD--DTHDRTLQL---LR 182
Query: 375 WFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKG------- 427
+ + +Q V + + KP GHG + L ++
Sbjct: 183 ELQLEVPNLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVP 242
Query: 428 -----------IFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCK 476
+ + G + Q +N A + + H + F
Sbjct: 243 DSGDGTATAQPLVNDWLAAGYESIVFIQDTNAGATITIP--ISLALSAEHSLDMNFTCIP 300
Query: 477 RSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRG-----PFSSNGLQADFPA 531
R E I +L K G + ++ +EY F + S + FP
Sbjct: 301 RV--PKEPIGLLCRTKKNSGD-PWLVANVEYNVFAEVSRALNKDGGDEVSDPTGFSPFPG 357
Query: 532 NTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIA 591
+ N L L+S + ++ Y D R+E MQ+IA
Sbjct: 358 SVNTLVFKLSSY------VDRLRESHGIVPEFINPKYSDE-TRRSFKKPARIESLMQDIA 410
Query: 592 DNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRN 651
F S Y+ + F + S + A +
Sbjct: 411 LLF----SEDDYRVGGTVFERFSYQPVK---NSLEEAAGLVAQGNGAYCAATGEAAFYEL 463
Query: 652 AYDILCQCHIKL-----PEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKFK-----GG 701
L + L PE+ +I+L +
Sbjct: 464 QRRRLKAIGLPLFYSSQPEVTVAKDAFGVRLFPIIVLDTVCASSGSLDDLARVFPTPEKV 523
Query: 702 SVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNN 761
+ + S L +E + +++L G+L I + N
Sbjct: 524 HIDQHSTLIVE-GRVIIESLELYGALTIRGPT-----------------DSMALPHVVRN 565
Query: 762 VKVLNKGIDWDCGDNTYWKHDVQWFEALKV 791
V N G + D + E ++
Sbjct: 566 AVVRNAGWSVHAILSLCAGRDSRLSEVDRI 595
|
| >1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A* Length = 505 | Back alignment and structure |
|---|
| >2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A* Length = 486 | Back alignment and structure |
|---|
| >3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica} Length = 405 | Back alignment and structure |
|---|
| >2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A* Length = 505 | Back alignment and structure |
|---|
| >3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei} Length = 484 | Back alignment and structure |
|---|
| >3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A Length = 528 | Back alignment and structure |
|---|
| >2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae} Length = 488 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 834 | |||
| 3ogz_A | 630 | UDP-sugar pyrophosphorylase; LEFT handed beta heli | 100.0 | |
| 2yqc_A | 486 | UDP-N-acetylglucosamine pyrophosphorylase; uridine | 100.0 | |
| 3r3i_A | 528 | UTP--glucose-1-phosphate uridylyltransferase; ross | 100.0 | |
| 3gue_A | 484 | UTP-glucose-1-phosphate uridylyltransferase 2; pho | 100.0 | |
| 1jv1_A | 505 | Glcnac1P uridyltransferase isoform 1: AGX1; nucleo | 100.0 | |
| 3oc9_A | 405 | UDP-N-acetylglucosamine pyrophosphorylase; structu | 100.0 | |
| 2oeg_A | 505 | UTP-glucose-1-phosphate uridylyltransferase 2, put | 100.0 | |
| 2i5k_A | 488 | UTP--glucose-1-phosphate uridylyltransferase; LEFT | 100.0 | |
| 2icy_A | 469 | Probable UTP-glucose-1-phosphate uridylyltransfera | 100.0 | |
| 3st8_A | 501 | Bifunctional protein GLMU; acetyltransferase, pyro | 98.32 | |
| 3oam_A | 252 | 3-deoxy-manno-octulosonate cytidylyltransferase; c | 97.77 | |
| 3brk_X | 420 | Glucose-1-phosphate adenylyltransferase; ADP-gluco | 97.56 | |
| 4ecm_A | 269 | Glucose-1-phosphate thymidylyltransferase; HET: DA | 97.55 | |
| 3tqd_A | 256 | 3-deoxy-manno-octulosonate cytidylyltransferase; c | 97.48 | |
| 1yp2_A | 451 | Glucose-1-phosphate adenylyltransferase small subu | 97.32 | |
| 3k8d_A | 264 | 3-deoxy-manno-octulosonate cytidylyltransferase; K | 97.3 | |
| 4fce_A | 459 | Bifunctional protein GLMU; GLMU. csgid, niaid, str | 97.25 | |
| 3juk_A | 281 | UDP-glucose pyrophosphorylase (GALU); transfer; HE | 97.21 | |
| 1fxo_A | 293 | Glucose-1-phosphate thymidylyltransferase; rhamnos | 97.21 | |
| 3f1c_A | 246 | Putative 2-C-methyl-D-erythritol 4-phosphate cytid | 97.13 | |
| 1ezi_A | 228 | CMP-N-acetylneuraminic acid synthetase; homodimer, | 97.12 | |
| 2qh5_A | 308 | PMI, ALGA, mannose-6-phosphate isomerase; structur | 97.11 | |
| 1lvw_A | 295 | Glucose-1-phosphate thymidylyltransferase; protein | 97.07 | |
| 4fcu_A | 253 | 3-deoxy-manno-octulosonate cytidylyltransferase; s | 97.01 | |
| 1qwj_A | 229 | Cytidine monophospho-N-acetylneuraminic acid synth | 96.93 | |
| 1h7e_A | 245 | 3-deoxy-manno-octulosonate cytidylyltransferase; n | 96.91 | |
| 1vic_A | 262 | 3-deoxy-manno-octulosonate cytidylyltransferase; s | 96.85 | |
| 2v0h_A | 456 | Bifunctional protein GLMU; cell WALL, magnesium, c | 96.83 | |
| 3pnn_A | 303 | Conserved domain protein; structural genomics, PSI | 96.81 | |
| 1hm9_A | 468 | GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltr | 96.76 | |
| 2xwl_A | 223 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; | 96.59 | |
| 2waw_A | 199 | MOBA relate protein; unknown function; HET: PGE; 1 | 96.5 | |
| 2wee_A | 197 | MOBA-related protein; unknown function; 1.65A {Myc | 96.48 | |
| 1tzf_A | 259 | Glucose-1-phosphate cytidylyltransferase; nucleoti | 96.47 | |
| 3q80_A | 231 | 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; | 96.45 | |
| 2yc3_A | 228 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltran | 96.26 | |
| 1i52_A | 236 | 4-diphosphocytidyl-2-C-methylerythritol synthase; | 96.22 | |
| 1vgw_A | 231 | 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; | 96.18 | |
| 1vpa_A | 234 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; | 96.17 | |
| 3rsb_A | 196 | Adenosylcobinamide-phosphate guanylyltransferase; | 96.05 | |
| 1mc3_A | 296 | Glucose-1-phosphate thymidylyltransferase; glucose | 96.05 | |
| 2vsh_A | 236 | TARI, 2-C-methyl-D-erythritol 4-phosphate cytidyly | 96.04 | |
| 3d5n_A | 197 | Q97W15_sulso; NESG, SSR125, structural genomics, P | 96.01 | |
| 1e5k_A | 201 | Molybdopterin-guanine dinucleotide biosynthesis pr | 95.96 | |
| 2px7_A | 236 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans | 95.67 | |
| 3ngw_A | 208 | Molybdopterin-guanine dinucleotide biosynthesis P | 95.55 | |
| 2y6p_A | 234 | 3-deoxy-manno-octulosonate cytidylyltransferase; l | 95.53 | |
| 1jyk_A | 254 | LICC protein, CTP:phosphocholine cytidylytransfera | 95.25 | |
| 4evw_A | 255 | Nucleoside-diphosphate-sugar pyrophosphorylase; st | 95.01 | |
| 2e3d_A | 302 | UTP--glucose-1-phosphate uridylyltransferase; UDP- | 94.85 | |
| 2e8b_A | 201 | Probable molybdopterin-guanine dinucleotide biosy | 94.82 | |
| 2xme_A | 232 | CTP-inositol-1-phosphate cytidylyltransferase; CDP | 94.74 | |
| 2ux8_A | 297 | Glucose-1-phosphate uridylyltransferase; UGPG, GAL | 94.61 | |
| 2pa4_A | 323 | UTP-glucose-1-phosphate uridylyltransferase; phosp | 94.27 | |
| 2x65_A | 336 | Mannose-1-phosphate guanylyltransferase; nucleotid | 94.16 | |
| 1w55_A | 371 | ISPD/ISPF bifunctional enzyme; biosynthetic pathwa | 93.89 | |
| 2cu2_A | 337 | Putative mannose-1-phosphate guanylyl transferase; | 92.87 | |
| 2dpw_A | 232 | Hypothetical protein TTHA0179; transferase, struct | 92.28 | |
| 2ggo_A | 401 | 401AA long hypothetical glucose-1-phosphate thymid | 91.98 |
| >3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-112 Score=976.74 Aligned_cols=559 Identities=19% Similarity=0.185 Sum_probs=474.9
Q ss_pred ccHHHHHHHHHH--cCCccccccCccchhhhhhhhhHHHHHHHHHhhhhccccCCCccccccccchhhHHHHHHHHHHHH
Q 003283 134 LDQLFLIKCVIA--AGQEHVLNLEPEYVESEARSDIKSALYALVEFIDRLDVNGRNSEAKDAVLEIEQVKDLNKLLKTLA 211 (834)
Q Consensus 134 ~~~~~l~~~L~~--~gQ~Hll~~~~~w~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~Ll~qL~ 211 (834)
++...|+++|.+ +||+|||++ |++. |+| ++++|++|++||.
T Consensus 7 ~~~~~L~~~l~~~~~gQ~HLf~~---w~~~---------------------------------l~~-~~~e~~~L~~qL~ 49 (630)
T 3ogz_A 7 SNLQALREELCTPGLDQGHLFEG---WPET---------------------------------VDE-CNERQIALLTDLY 49 (630)
T ss_dssp HHHHHHHHHHTSTTTCCGGGGTT---CCSS---------------------------------GGG-CCHHHHHHHHHHH
T ss_pred hhHHHHHHHhhhccCCchhhhhh---cccc---------------------------------cCC-CHHHHHHHHHHHH
Confidence 467889999997 999999999 5440 341 2348999999999
Q ss_pred HHhccccCcchhHHHHHHHHHHHHccccccccccccccccccccccccc-cCC---CCcccCCChHHHHHHHHHhhhccC
Q 003283 212 EIEQFYDCVGGIIGYQVEVLELLAQSKFERKTTKSQHVHESMECQFLEI-HVP---SGLDLSQNTEYAAQAALWGIEGLP 287 (834)
Q Consensus 212 ~ld~~y~~~ggl~~y~~~a~~ll~~s~~~~~~~~~~~~~~~~~~~~~~~-~vP---~g~~l~~~~~~~~~~~~~Gle~L~ 287 (834)
.||..| +|||.+|+++|++++. +.. +. ++++.+ ++| .+..++.+++...+|+++|+++|+
T Consensus 50 ~~d~~~--~~gl~~~~~~a~~~l~-~~~--~~-----------~~~~~~~p~P~~~~~~~l~~~~~~~~~~~~~Gl~~i~ 113 (630)
T 3ogz_A 50 MFSNMY--PGGVAQYIRNGHELLA-RES--EE-----------VDFAALEMPPLIFEAPSLHRRTAERTALENAGTAMLC 113 (630)
T ss_dssp HGGGTS--TTHHHHHHHHHHHHHH-HHT--SC-----------CCCSEEECCSCEEECCCTTCCCHHHHHHHHHHHHHGG
T ss_pred hhChhh--hhhHHHHHHHHHHHhh-ccc--cC-----------CcccccccCCCCCccccccCCHHHHHHHHHHhHHHHh
Confidence 999988 5999999999999993 321 11 233433 233 466666667778899999999999
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeccccCCCCCcchHHHHHHHHHHHHHhHhhcCCcccceEEEecCCCCCchHHHH
Q 003283 288 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERIT 367 (834)
Q Consensus 288 kvavVlLAGGlGTRLG~~~pKgg~~lpV~l~p~sgkTlLql~~e~I~~lq~La~k~~g~~~~IPl~IMTS~~~~Th~~T~ 367 (834)
|+|||+||||||||||+++||+ +|||+++ +++||||++++||++ ++| +.||||||||+ +||++|+
T Consensus 114 kvavvllaGGlGTRLG~~~pK~--~lpv~~~--s~ks~lql~~e~i~~-------~~g--~~iPl~IMTS~--~T~~~T~ 178 (630)
T 3ogz_A 114 KTVFVLVAGGLGERLGYSSIKV--SLPVETA--TNTTYLAYYLRWAQR-------VGG--KEVPFVIMTSD--DTHDRTL 178 (630)
T ss_dssp GEEEEEECCCEEGGGTEEEEGG--GSBSCTT--TCCBHHHHHHHHHHH-------HHC--TTCCEEEEECT--TTHHHHH
T ss_pred hceEEEecCCcccccCCCCCcc--cceecCC--CCCcHHHHHHHHHHH-------HhC--CCCcEEEEecc--cchHHHH
Confidence 9999999999999999999999 9999977 999999999999993 357 89999999999 7999999
Q ss_pred HHHHHhCCCCCCCCceEEEecCCeeeEecCCCcccccCCCCccccCCCCcHHHHHHHhcC------------------ch
Q 003283 368 SLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKG------------------IF 429 (834)
Q Consensus 368 ~fle~n~yFGl~~~qV~~F~Q~~vP~l~~~dgki~l~~~~~i~~~P~GHGdIy~aL~~sG------------------lL 429 (834)
+||++ ||++++||+||+|+++||+++++|+++++++++++|+|+||||||.+|+++| +|
T Consensus 179 ~~~~~---fgl~~~~V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv~~aL~~sG~~~~~~~~~~~~~~~~~~lL 255 (630)
T 3ogz_A 179 QLLRE---LQLEVPNLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVPDSGDGTATAQPLV 255 (630)
T ss_dssp HHHHH---TTCCCTTEEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHHHHHHHHCBC--------------CCBHH
T ss_pred HHHHH---hCCCcccEEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHHHHHHHHcCCCcccccccccccccHHHHH
Confidence 99999 9999999999999999999878899999999999999999999999999999 99
Q ss_pred HHHHHcCceEEEEEeCCCCcccc-cHhHHHHhhhhhhcCCceeEEEeeecCCCCcCceEEEEeecCCCccccceEEEEec
Q 003283 430 KWFHDNGRKGATVRQVSNVVAAT-DLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYT 508 (834)
Q Consensus 430 d~l~~~Gikyi~v~~vDN~La~v-DP~~l~flG~~~~~~~~~~~~~vvRK~~~~ekvGvL~~~~~~dGk~~~~~~vVEYs 508 (834)
++|+++|++|+||+||||+|+++ ||.| +|+++.++++|++++|.|+ ++|++|++|+.++.||++ ++++||||+
T Consensus 256 d~l~~~Gieyi~v~~vDN~L~~~~DP~~---lG~~~~~~~d~~~kvv~r~--p~E~vG~l~~~~~~dGk~-~~v~vVEYs 329 (630)
T 3ogz_A 256 NDWLAAGYESIVFIQDTNAGATITIPIS---LALSAEHSLDMNFTCIPRV--PKEPIGLLCRTKKNSGDP-WLVANVEYN 329 (630)
T ss_dssp HHHHHTTCCEEEEECTTBTTHHHHHHHH---HHHHHHTTCSEEEEEECCC--SSCSSCEEEEEESSTTSC-CEEEEECHH
T ss_pred HHHHHcCCEEEEEEccCCccccccCHHH---hHHHHhcCCCEEEEEEECC--CCcceeeEEEEecCCCce-eeeeEEEec
Confidence 99999999999999999999987 9966 8999999999999986653 688999999866679981 134789999
Q ss_pred ccCccCC----CCCC-CCCCCccccCccceeeeEEeHHHHHhhhcccccCCccccccccCCCcceecCCCCccccCccee
Q 003283 509 EFDKFGI----TRGP-FSSNGLQADFPANTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRL 583 (834)
Q Consensus 509 El~~~~~----~~~~-~~dg~l~s~f~~Ninnl~fsL~~L~~vl~~~~~~~Lp~hIanpKKkIpy~D~~g~~~~~~p~rL 583 (834)
|++++.. ++++ +.+.+.++.||||||||||+|++|.+.+.. ..+.+|.+| ||| |+|.++ ..+++++||
T Consensus 330 ei~~~~~~~~~~~g~~~~~~~~~~~f~GNtNnl~~~L~a~~~~l~~-~~~~ip~~v-NpK----~~d~~~-~~~~~~~qL 402 (630)
T 3ogz_A 330 VFAEVSRALNKDGGDEVSDPTGFSPFPGSVNTLVFKLSSYVDRLRE-SHGIVPEFI-NPK----YSDETR-RSFKKPARI 402 (630)
T ss_dssp HHHHHHHHC------------CCCSSCEEEEEEEEEHHHHHHHHHH-HTTCCCCEE-CCC----BSSSSS-CCBSSCBCE
T ss_pred cCCHhHhhccCCCccccccccccccccccceeeeEEHHHHHHHHHh-ccCccceec-CCc----ccCCcc-cccCcchhh
Confidence 9999852 1233 344455788999999999999999988876 578899655 998 999875 468889999
Q ss_pred ccchhhhhhhhccccccccccceeeecccceeeeeccCCCchhhhhccccCCCCCCChhhhHHHHHHHHHHHHHHCCccc
Q 003283 584 ECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHIKL 663 (834)
Q Consensus 584 E~~Mqdi~~~F~~~y~~~~~~~~f~~~~R~~~FsPvKn~~~sa~k~~~~~~~~~~~sp~ta~~dl~~~~~~~L~~aG~~v 663 (834)
||||||++++|+. ...++++++++| .+|+||||+..+|+++...+ .+++||+|+++|||+++++||++||+++
T Consensus 403 Et~m~d~~~~F~~----~~~~v~~~~V~R-~~F~PVKn~~~~a~~k~~~g--~~~~sp~t~~~dly~~~~~~L~~aG~~v 475 (630)
T 3ogz_A 403 ESLMQDIALLFSE----DDYRVGGTVFER-FSYQPVKNSLEEAAGLVAQG--NGAYCAATGEAAFYELQRRRLKAIGLPL 475 (630)
T ss_dssp ECCGGGGGGGCCT----TTCCEEEEECCG-GGCCBCCBCHHHHHHHHHTT--CCCCBHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred hhHHHHHHHhccc----cCcceeEEEECC-CeeecccCChhHhhhhhccC--CCcCChHHHHHHHHHHHHHHHHHcCcee
Confidence 9999999999961 233788999999 89999999999988777764 3578999999999999999999999998
Q ss_pred Cc---cc---CCCc-ccccCCCeEEEeCCCcccc--HHHHhcccCC--C-CCCCCcEEEEEeceEEeeceEEEEEEEEEe
Q 003283 664 PE---IE---GNDK-YIDDGPPYLILLHPALGLL--WEVTRQKFKG--G-SVSKGSELQIEVAEFLWRNVQLDGSLIIVA 731 (834)
Q Consensus 664 ~~---~~---~~~~-~~~~~P~~~I~L~P~~~~~--~~~~~~k~~~--g-si~~~S~L~VeG~~~f~~~v~ldGslvI~a 731 (834)
+. ++ +++. +++.||. |+|+|+|+++ |+++++||++ + +|+++|+|+|+|+ ++|+||+|||+|+|.|
T Consensus 476 ~~~~~~~~~~~~~~~~~~~~P~--i~l~p~~~~~~~~~~~~~k~~~~~~~~i~~~S~L~veg~-v~~~~l~LdG~lvI~a 552 (630)
T 3ogz_A 476 FYSSQPEVTVAKDAFGVRLFPI--IVLDTVCASSGSLDDLARVFPTPEKVHIDQHSTLIVEGR-VIIESLELYGALTIRG 552 (630)
T ss_dssp CCCCSCSEEETTTTEEECCCSE--EEECHHHHTTCCHHHHHHHCSSGGGEEECTTCEEEEESS-EEESCEEEESEEEEEC
T ss_pred cccccchhhhhcCccccCCCCE--EEEeccccccccHHHHHHHhCCCCCceecCCcEEEEEEE-EEEEEEEEeeEEEEEc
Confidence 83 32 5676 8889995 9999999999 9999999999 5 8999999999999 9999999999999999
Q ss_pred cCCCCCccccCCCccceecccccceEEEeeeEEeeCceeeecC----CC-CCCcccceeeeeEEEEEecceeeEecc
Q 003283 732 ENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCG----DN-TYWKHDVQWFEALKVILHGNAEFEASD 803 (834)
Q Consensus 732 ~~~~g~~~~~~~g~~i~~~~~~~g~~~l~~~~V~N~G~~~~~~----~~-~~~~~e~~r~~~~~i~~~~~~ef~a~~ 803 (834)
++ |+.. .| .|++++ +|+|+||.|.++ +. +...+|+.|||||+|+++|+.|++...
T Consensus 553 ~~--~~~~-----~~---------~v~~~~-~v~n~g~~~~~~~~~~~~~~~~~~~~~~irg~~~~~~e~~~~~~~~ 612 (630)
T 3ogz_A 553 PT--DSMA-----LP---------HVVRNA-VVRNAGWSVHAILSLCAGRDSRLSEVDRIRGFVLKKTAMAVMDCNT 612 (630)
T ss_dssp CS--STTS-----CC---------EEECSE-EEECCCCEEEECCTTC----CCCCHHHHTTTEEEECCCCEEECC--
T ss_pred CC--CCcc-----Cc---------eEEecc-eEecCCcEEEEcccccccccCCCChhhcccceeEEeeeEEEEEecC
Confidence 95 3421 23 388888 999999999999 43 337899999999999999999998665
|
| >2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A* | Back alignment and structure |
|---|
| >3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A | Back alignment and structure |
|---|
| >3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei} | Back alignment and structure |
|---|
| >1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A* | Back alignment and structure |
|---|
| >3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica} | Back alignment and structure |
|---|
| >2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A* | Back alignment and structure |
|---|
| >2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A* | Back alignment and structure |
|---|
| >3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13 | Back alignment and structure |
|---|
| >3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
| >4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A* | Back alignment and structure |
|---|
| >3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0 | Back alignment and structure |
|---|
| >1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A* | Back alignment and structure |
|---|
| >3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A* | Back alignment and structure |
|---|
| >4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A* | Back alignment and structure |
|---|
| >3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A* | Back alignment and structure |
|---|
| >1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ... | Back alignment and structure |
|---|
| >3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0 | Back alignment and structure |
|---|
| >1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A | Back alignment and structure |
|---|
| >2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori} | Back alignment and structure |
|---|
| >1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6 | Back alignment and structure |
|---|
| >4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A | Back alignment and structure |
|---|
| >1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13 | Back alignment and structure |
|---|
| >1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A* | Back alignment and structure |
|---|
| >1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A* | Back alignment and structure |
|---|
| >2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A* | Back alignment and structure |
|---|
| >3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
| >1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A* | Back alignment and structure |
|---|
| >2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A* | Back alignment and structure |
|---|
| >2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP} | Back alignment and structure |
|---|
| >2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A | Back alignment and structure |
|---|
| >1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A* | Back alignment and structure |
|---|
| >3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A* | Back alignment and structure |
|---|
| >2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A* | Back alignment and structure |
|---|
| >1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A | Back alignment and structure |
|---|
| >1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A | Back alignment and structure |
|---|
| >1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13 | Back alignment and structure |
|---|
| >3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6 | Back alignment and structure |
|---|
| >2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A* | Back alignment and structure |
|---|
| >3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
| >1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A* | Back alignment and structure |
|---|
| >2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
| >3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
| >2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A* | Back alignment and structure |
|---|
| >4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae} | Back alignment and structure |
|---|
| >2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli} | Back alignment and structure |
|---|
| >2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A* | Back alignment and structure |
|---|
| >2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea} | Back alignment and structure |
|---|
| >2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
| >2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A* | Back alignment and structure |
|---|
| >1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A* | Back alignment and structure |
|---|
| >2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20 | Back alignment and structure |
|---|
| >2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19 | Back alignment and structure |
|---|
| >2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 834 | ||||
| d1jv1a_ | 501 | c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphor | 1e-38 | |
| d2icya2 | 378 | c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 | 6e-19 |
| >d1jv1a_ c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphorylase {Human (Homo sapiens), AGX1 [TaxId: 9606]} Length = 501 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: UDP-glucose pyrophosphorylase domain: UDP-N-acetylglucosamine pyrophosphorylase species: Human (Homo sapiens), AGX1 [TaxId: 9606]
Score = 148 bits (376), Expect = 1e-38
Identities = 89/475 (18%), Positives = 162/475 (34%), Gaps = 90/475 (18%)
Query: 132 LNLDQLFLIKCVIAAGQEHVLNLEPEYVESEARSDIKSALYALVEFIDRLDVNGRNSEAK 191
+N++ L + AGQEH+L E E++ + LYA ++ ++
Sbjct: 1 MNINDL--KLTLSKAGQEHLLRFWNELEEAQ-----QVELYAELQAMN------------ 41
Query: 192 DAVLEIEQVKDLNKLLKTLAEIEQFYDCVGGIIGYQVEVLELLAQSKFERKTTKSQHVHE 251
E+ F+ +E QS ++V
Sbjct: 42 ------------------FEELNFFFQKA----------IEGFNQSS------HQKNVDA 67
Query: 252 SMECQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLPE--LGEIYPLGGSADRLGLVDHET 309
ME E+ + D Q + ++ G+ + + + + GG RLG+
Sbjct: 68 RMEPVPREVLGSATRDQDQLQAWESE----GLFQISQNKVAVLLLAGGQGTRLGVAY--- 120
Query: 310 GECLPAAMLP---YCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERI 366
P M +TL + + + + K YG +CI P IMTS E
Sbjct: 121 ----PKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTS--GRTMEST 174
Query: 367 TSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDK 426
+ ++FG + + F+Q ++PA+ DG+ ++ P G+G +++ +
Sbjct: 175 KEFFTKHKYFGLKKENVIFFQQGMLPAMS-FDGKIILEEKNKVSMAPDGNGGLYRALAAQ 233
Query: 427 GIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGIN 486
I + G V V N++ G + G G ++++ TE +
Sbjct: 234 NIVEDMEQRGIWSIHVYCVDNILVKV--ADPRFIGFCIQKGADCGAKVVEKTN-PTEPVG 290
Query: 487 VLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQADFPANTNILYVDLASAELV 546
V+ DG +EY+E T SS+G N + + V
Sbjct: 291 VVCRV---DGV----YQVVEYSEISLA--TAQKRSSDGRLLFNAGNIANHFFTVPFLRDV 341
Query: 547 GSSENERSLPGMVLNTKKPIVYMDNFGDTH---SVPGGRLECTMQNIADNFLNTY 598
+ E L V +K I Y+D G G ++E + +I
Sbjct: 342 -VNVYEPQLQHHV--AQKKIPYVDTQGQLIKPDKPNGIKMEKFVFDIFQFAKKFV 393
|
| >d2icya2 c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 378 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 834 | |||
| d1jv1a_ | 501 | UDP-N-acetylglucosamine pyrophosphorylase {Human ( | 100.0 | |
| d2icya2 | 378 | UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c | 100.0 | |
| d2icya1 | 83 | UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c | 98.91 | |
| d1yp2a2 | 307 | Glucose-1-phosphate adenylyltransferase small subu | 97.7 | |
| d2cu2a2 | 268 | Putative mannose-1-phosphate guanylyl transferase | 97.47 | |
| d1w77a1 | 226 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 97.45 | |
| d1fxoa_ | 292 | RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} | 97.39 | |
| d1lvwa_ | 295 | RmlA (RfbA) {Archaeon Methanobacterium thermoautot | 97.36 | |
| d1i52a_ | 225 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 97.13 | |
| d2oi6a2 | 248 | N-acetylglucosamine 1-phosphate uridyltransferase | 97.07 | |
| d1mc3a_ | 291 | RffH {Escherichia coli [TaxId: 562]} | 97.06 | |
| d1vpaa_ | 221 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 96.98 | |
| d1tzfa_ | 259 | Glucose-1-phosphate cytidylyltransferase RfbF {Sal | 96.93 | |
| d1g97a2 | 250 | N-acetylglucosamine 1-phosphate uridyltransferase | 96.89 | |
| d1jyka_ | 229 | CTP:phosphocholine cytidylytransferase LicC {Strep | 96.85 | |
| d1vgwa_ | 226 | 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) | 96.79 | |
| d1w55a1 | 205 | IspD/IspF bifunctional enzyme, CDP-me synthase dom | 96.78 | |
| d1e5ka_ | 188 | Molybdenum cofactor biosynthesis protein MobA {Esc | 96.6 | |
| d2dpwa1 | 231 | Uncharacterized protein TTHA0179 {Thermus thermoph | 94.79 |
| >d1jv1a_ c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphorylase {Human (Homo sapiens), AGX1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: UDP-glucose pyrophosphorylase domain: UDP-N-acetylglucosamine pyrophosphorylase species: Human (Homo sapiens), AGX1 [TaxId: 9606]
Probab=100.00 E-value=3.3e-91 Score=790.33 Aligned_cols=432 Identities=20% Similarity=0.248 Sum_probs=374.1
Q ss_pred ccHHHHHHHHHHcCCccccccCccchhhhhhhhhHHHHHHHHHhhhhccccCCCccccccccchhhHHHHHHHHHHHHHH
Q 003283 134 LDQLFLIKCVIAAGQEHVLNLEPEYVESEARSDIKSALYALVEFIDRLDVNGRNSEAKDAVLEIEQVKDLNKLLKTLAEI 213 (834)
Q Consensus 134 ~~~~~l~~~L~~~gQ~Hll~~~~~w~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~Ll~qL~~l 213 (834)
|+.++|+++|.++||+|||++ |++ |+++ +|++|++||..+
T Consensus 1 m~~~~l~~~L~~~gQ~HLl~~---~~~----------------------------------l~~~---ek~~L~~qL~~i 40 (501)
T d1jv1a_ 1 MNINDLKLTLSKAGQEHLLRF---WNE----------------------------------LEEA---QQVELYAELQAM 40 (501)
T ss_dssp CCHHHHHHHHHHTTCGGGGTT---GGG----------------------------------SCHH---HHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHhCcHHHHhh---hhh----------------------------------CCHH---HHHHHHHHHHhc
Confidence 467789999999999999999 655 7776 899999999999
Q ss_pred hccccCcchhHHHHHHHHHHHHccccccccccccccccccccccccc-cCCCCc--ccCCChHHHHHHHHHhhhccC--c
Q 003283 214 EQFYDCVGGIIGYQVEVLELLAQSKFERKTTKSQHVHESMECQFLEI-HVPSGL--DLSQNTEYAAQAALWGIEGLP--E 288 (834)
Q Consensus 214 d~~y~~~ggl~~y~~~a~~ll~~s~~~~~~~~~~~~~~~~~~~~~~~-~vP~g~--~l~~~~~~~~~~~~~Gle~L~--k 288 (834)
|. ++|..|++++.+++..+.. ... +++.+ ++|+.. ......+...+|++.|+++|+ |
T Consensus 41 d~-----~~l~~~~~~a~~~~~~~~~-~~~------------~~~~~~p~p~~~~~~~~~~~~~~~~~~~~G~~~i~~gk 102 (501)
T d1jv1a_ 41 NF-----EELNFFFQKAIEGFNQSSH-QKN------------VDARMEPVPREVLGSATRDQDQLQAWESEGLFQISQNK 102 (501)
T ss_dssp CH-----HHHHHHHHHHHHCC------------------------CCBCCCGGGEEETTTTGGGHHHHHHHHHHHHHTTC
T ss_pred CH-----HHHHHHHHHHHHHhhhccc-ccC------------ccccccCCChhhhcccccChHHHHHHHHhhHHHHhcCC
Confidence 85 8999999999887766531 111 22222 444433 223344556788899999995 8
Q ss_pred EEEEEecCCccccCCCCCCCCCceeeccccCCCCCcchHHHHHHHHHHHHHhHhhcCCcccceEEEecCCCCCchHHHHH
Q 003283 289 LGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITS 368 (834)
Q Consensus 289 vavVlLAGGlGTRLG~~~pKgg~~lpV~l~p~sgkTlLql~~e~I~~lq~La~k~~g~~~~IPl~IMTS~~~~Th~~T~~ 368 (834)
||||+||||||||||+++||+ ++||+++ +++||||++++||++++++|.+++|..+.||||||||+ +||++|++
T Consensus 103 vavvllaGG~GTRLG~~~pK~--~~~v~~~--~~ksllql~~e~i~~l~~~a~~~~~~~~~iPl~IMtS~--~T~~~t~~ 176 (501)
T d1jv1a_ 103 VAVLLLAGGQGTRLGVAYPKG--MYDVGLP--SRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSG--RTMESTKE 176 (501)
T ss_dssp EEEEEECCCCCCTTSCSSCGG--GCCCCCT--TCCCHHHHHHHHHHHHHHHHHHHHSSCCCCCEEEEECT--TTHHHHHH
T ss_pred EEEEEECCCccccCCCCCCce--eeeeccC--CCCcHHHHHHHHHHHHHHHHHHhcCCCCCceEEEECCh--hHhHHHHH
Confidence 999999999999999999999 9999876 99999999999999999999988888899999999999 79999999
Q ss_pred HHHHhCCCCCCCCceEEEecCCeeeEecCCCcccccCCCCccccCCCCcHHHHHHHhcCchHHHHHcCceEEEEEeCCCC
Q 003283 369 LCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNV 448 (834)
Q Consensus 369 fle~n~yFGl~~~qV~~F~Q~~vP~l~~~dgki~l~~~~~i~~~P~GHGdIy~aL~~sGlLd~l~~~Gikyi~v~~vDN~ 448 (834)
||++|+|||++++||++|+|+++||++ .+|+++++++++++|+|+||||||.+|+++|+|++|+++|++|++|+||||+
T Consensus 177 ~l~~~~~FGl~~~~v~~f~Q~~~P~~~-~~g~i~~~~~~~i~~~P~GhG~i~~aL~~sG~ld~l~~~Gi~yi~v~~vDN~ 255 (501)
T d1jv1a_ 177 FFTKHKYFGLKKENVIFFQQGMLPAMS-FDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNI 255 (501)
T ss_dssp HHHHTGGGGSCGGGEEEEECCEEECEE-TTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEEEETTBT
T ss_pred HHHhccccCCCcCceEEEEecCcceEC-CCCCcccCCCCcccccCCCchHHHHHHHHCCcHHHHHHCCCEEEEEEecCCc
Confidence 999999999999999999999999998 7899999999999999999999999999999999999999999999999999
Q ss_pred cccc-cHhHHHHhhhhhhcCCceeEEEeeecCCCCcCceEEEEeecCCCccccceEEEEecccCccCCCCCCCCCCCccc
Q 003283 449 VAAT-DLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQA 527 (834)
Q Consensus 449 La~v-DP~~l~flG~~~~~~~~~~~~~vvRK~~~~ekvGvL~~~~~~dGk~~~~~~vVEYsEl~~~~~~~~~~~dg~l~s 527 (834)
|+++ ||.| +|+++..++++++++ ++|+.++|+||+||+ .||+ +++|||+|+|++. ++...++|.+.
T Consensus 256 l~~~~Dp~~---lG~~~~~~~~~~~kv-v~k~~~~e~~G~l~~---~dg~----~~vvEysel~~~~-~~~~~~~g~l~- 322 (501)
T d1jv1a_ 256 LVKVADPRF---IGFCIQKGADCGAKV-VEKTNPTEPVGVVCR---VDGV----YQVVEYSEISLAT-AQKRSSDGRLL- 322 (501)
T ss_dssp TCCTTCHHH---HHHHHHTTCSEEEEE-EECCSTTCSCCEEEE---ETTE----EEEECGGGSCHHH-HHCBCTTSSBS-
T ss_pred cccccCHHH---HHHHHhcccceeEEE-EEcCCCCcccceEEE---ECCe----EEEEEeccCCHHH-HhhccCCCccc-
Confidence 9987 9966 899999999999997 666779999999998 7999 9999999999986 55566677765
Q ss_pred cCcc-ceeeeEEeHHHHHhhhcccccCCccccccccCCCcceecCCCCcc---ccCcceeccchhhhhhhhccccccccc
Q 003283 528 DFPA-NTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTH---SVPGGRLECTMQNIADNFLNTYSSRCY 603 (834)
Q Consensus 528 ~f~~-Ninnl~fsL~~L~~vl~~~~~~~Lp~hIanpKKkIpy~D~~g~~~---~~~p~rLE~~Mqdi~~~F~~~y~~~~~ 603 (834)
|++ |||||||+++||+++++. ....||+|++. |||||+|.+|... .++++|||+||||++..|.
T Consensus 323 -f~~~Ni~~~~fsl~fl~~~~~~-~~~~l~~hva~--Kki~~~d~~~~~~~p~~~n~iklE~fifD~~~~~~-------- 390 (501)
T d1jv1a_ 323 -FNAGNIANHFFTVPFLRDVVNV-YEPQLQHHVAQ--KKIPYVDTQGQLIKPDKPNGIKMEKFVFDIFQFAK-------- 390 (501)
T ss_dssp -SCEEEEEEEEEEHHHHHHHHHT-TGGGCCCEEEE--ECCCEECTTSCEECCSSCCEEEEECCGGGGGGGCS--------
T ss_pred -ccccceeheeeEHHHHHHHHHh-cccCCCceEec--cccCccCCCCCcccCCCCcchhHHHHHHHHHHhcc--------
Confidence 876 999999999999999986 56789999988 9999999887542 3456899999999888764
Q ss_pred cceeeecccceeeeeccCCCchhhhhccccCCCCCCChhhhHHHHHHHHHHHHHHCCcccCc
Q 003283 604 KGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHIKLPE 665 (834)
Q Consensus 604 ~~~f~~~~R~~~FsPvKn~~~sa~k~~~~~~~~~~~sp~ta~~dl~~~~~~~L~~aG~~v~~ 665 (834)
++++.+++|+.+|+|+||+++.. ..|||+||+.+++..+++||.++|+++.+
T Consensus 391 ~~~~~~V~R~~eFaPvKN~~~~~----------~~dsp~ta~~~l~~~~~~wl~~aG~~~~~ 442 (501)
T d1jv1a_ 391 KFVVYEVLREDEFSPLKNADSQN----------GKDNPTTARHALMSLHHCWVLNAGGHFID 442 (501)
T ss_dssp SEEEEEECHHHHCCBCCSCTTSS----------SSSSHHHHHHHHHHHHHHHHHHTTCEEBC
T ss_pred ceEEEEEchhhccccccCCCCCC----------CCCCHHHHHHHHHHHhHHHHHHcCCeEec
Confidence 67789999999999999976431 13699999999999999999999998853
|
| >d2icya1 b.81.1.4 (A:384-466) UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1yp2a2 c.68.1.6 (A:10-316) Glucose-1-phosphate adenylyltransferase small subunit, catalytic domain {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
| >d2cu2a2 c.68.1.20 (A:1-268) Putative mannose-1-phosphate guanylyl transferase (GDP)/mannose-6-phosphate isomerase TTHA1750 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1w77a1 c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1fxoa_ c.68.1.6 (A:) RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1lvwa_ c.68.1.6 (A:) RmlA (RfbA) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
| >d1i52a_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2oi6a2 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1mc3a_ c.68.1.6 (A:) RffH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1vpaa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1tzfa_ c.68.1.13 (A:) Glucose-1-phosphate cytidylyltransferase RfbF {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1g97a2 c.68.1.5 (A:2-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d1jyka_ c.68.1.13 (A:) CTP:phosphocholine cytidylytransferase LicC {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d1vgwa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Neisseria gonorrhoeae [TaxId: 485]} | Back information, alignment and structure |
|---|
| >d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
| >d1e5ka_ c.68.1.8 (A:) Molybdenum cofactor biosynthesis protein MobA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2dpwa1 c.68.1.19 (A:1-231) Uncharacterized protein TTHA0179 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|