Citrus Sinensis ID: 003313
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 831 | 2.2.26 [Sep-21-2011] | |||||||
| Q43128 | 947 | ATPase 10, plasma membran | yes | no | 0.998 | 0.876 | 0.733 | 0.0 | |
| Q9SH76 | 949 | ATPase 6, plasma membrane | no | no | 0.977 | 0.855 | 0.698 | 0.0 | |
| Q7XPY2 | 951 | Plasma membrane ATPase OS | no | no | 0.985 | 0.861 | 0.706 | 0.0 | |
| Q03194 | 952 | Plasma membrane ATPase 4 | N/A | no | 0.977 | 0.852 | 0.700 | 0.0 | |
| Q9M2A0 | 948 | ATPase 8, plasma membrane | no | no | 0.977 | 0.856 | 0.690 | 0.0 | |
| Q9SU58 | 960 | ATPase 4, plasma membrane | no | no | 0.977 | 0.845 | 0.698 | 0.0 | |
| Q9LV11 | 956 | ATPase 11, plasma membran | no | no | 0.975 | 0.848 | 0.699 | 0.0 | |
| P83970 | 951 | Plasma membrane ATPase OS | N/A | no | 0.985 | 0.861 | 0.696 | 0.0 | |
| P19456 | 948 | ATPase 2, plasma membrane | no | no | 0.983 | 0.861 | 0.690 | 0.0 | |
| P20649 | 949 | ATPase 1, plasma membrane | no | no | 0.983 | 0.860 | 0.692 | 0.0 |
| >sp|Q43128|PMA10_ARATH ATPase 10, plasma membrane-type OS=Arabidopsis thaliana GN=AHA10 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 1241 bits (3212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 629/858 (73%), Positives = 713/858 (83%), Gaps = 28/858 (3%)
Query: 1 MPEDLEKPLLDPENCNCGGIDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEK 60
M EDL+KPLLDP+ N GIDL LPL+EVF L T+ QGL S DAE RLK FG N+LE+
Sbjct: 1 MAEDLDKPLLDPDTFNRKGIDLGILPLEEVFEYLRTSPQGLLSGDAEERLKIFGPNRLEE 60
Query: 61 KPENKFLKFLSFMWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFI 120
K EN+F+KFL FMWNPLSWVME AALMAIALAN GPDW+D GIVCLL+IN++ISF
Sbjct: 61 KQENRFVKFLGFMWNPLSWVMEAAALMAIALANSQSLGPDWEDFTGIVCLLLINATISFF 120
Query: 121 EESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGD 180
EE+NA NA AALMA L KT+VLRDGQW+EQDA++LVPGDIISIK GD+IPADARLLEGD
Sbjct: 121 EENNAGNAAAALMARLALKTRVLRDGQWQEQDASILVPGDIISIKLGDIIPADARLLEGD 180
Query: 181 PLKIDQSELTGESLTVTKETGDEVFSGLTCKHVH-----------SFFGKAADLVDSTEV 229
PLKIDQS LTGESL VTK+ G++VFSG TCK +FFGK A LVDST+V
Sbjct: 181 PLKIDQSVLTGESLPVTKKKGEQVFSGSTCKQGEIEAVVIATGSTTFFGKTARLVDSTDV 240
Query: 230 VGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRIN----------------M 273
GHFQQVLTSIGNFCIC I VGM+LEII+MFP+QHR YR IN +
Sbjct: 241 TGHFQQVLTSIGNFCICSIAVGMVLEIIIMFPVQHRSYRIGINNLLVLLIGGIPIAMPTV 300
Query: 274 LSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRD 333
LSVTLAI S+RLSQ+GAITKRMTAIEEMA MDVLC KT LTLN LTVD+NLIEVF
Sbjct: 301 LSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNSLTVDKNLIEVFVDY 360
Query: 334 MDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYT 393
MDKD ++LLA RASRLENQDAIDAAI++MLADP+EARANI E+HFLPFNPVDKRTAITY
Sbjct: 361 MDKDTILLLAGRASRLENQDAIDAAIVSMLADPREARANIREIHFLPFNPVDKRTAITYI 420
Query: 394 DSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDS 453
DS+G WYRA+KGAPEQ+LN+CQ+K EI +V+ II++ AEKGLRSLAVA QE+PE + +S
Sbjct: 421 DSDGKWYRATKGAPEQVLNLCQQKNEIAQRVYAIIDRFAEKGLRSLAVAYQEIPEKSNNS 480
Query: 454 PGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY 513
PGGP FCGLLPLFDPPRHDS +TI RAL LGVCVKMITGD LAIAKETGRRLG+GTNMY
Sbjct: 481 PGGPWRFCGLLPLFDPPRHDSGETILRALSLGVCVKMITGDQLAIAKETGRRLGMGTNMY 540
Query: 514 PSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDA 573
PSS LLG + DE+EA+PVDELIE ADGF VF EHKYEIVKILQE KHVVGMTGDGVNDA
Sbjct: 541 PSSSLLGHNNDEHEAIPVDELIEMADGFAGVFPEHKYEIVKILQEMKHVVGMTGDGVNDA 600
Query: 574 PALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSIT 633
PALKKADIGIAVA AT+AAR +ADIVLT+PGLSVI SAVLTSR +FQ M+N ++AVSIT
Sbjct: 601 PALKKADIGIAVADATDAARSSADIVLTDPGLSVIISAVLTSRAIFQRMRNYTVYAVSIT 660
Query: 634 IHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAAG 693
I IVL F LLALIWEYDFPPFMVLIIA+LNDGTI+TISK RV+ S P+ WKLN+IFA G
Sbjct: 661 IRIVLGFTLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVRPSPTPESWKLNQIFATG 720
Query: 694 IVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTR 753
IVIG YLALVT+LFYW++V T FFE HFHV+S+++N+E++SSA++LQVSIISQALIFVTR
Sbjct: 721 IVIGTYLALVTVLFYWIIVSTTFFEKHFHVKSIANNSEQVSSAMYLQVSIISQALIFVTR 780
Query: 754 SQSWSFLERPGALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYIL 813
S+ WSF ERPG LL+ AF+LAQL ATLIAVYA+ISFA I+GIGW WAGVIWLYSL+FYI
Sbjct: 781 SRGWSFFERPGTLLIFAFILAQLAATLIAVYANISFAKITGIGWRWAGVIWLYSLIFYIP 840
Query: 814 LDIIKFTVR-TLSREAWN 830
LD+IKF LS EAWN
Sbjct: 841 LDVIKFVFHYALSGEAWN 858
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 6 |
| >sp|Q9SH76|PMA6_ARATH ATPase 6, plasma membrane-type OS=Arabidopsis thaliana GN=AHA6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1171 bits (3029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 587/840 (69%), Positives = 678/840 (80%), Gaps = 28/840 (3%)
Query: 20 IDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKPENKFLKFLSFMWNPLSW 79
+DL ++P+DEVF QL +R+GLSSE+ RL+ FG+NKLE+K ENKFLKFL FMWNPLSW
Sbjct: 15 VDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLKFLGFMWNPLSW 74
Query: 80 VMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPK 139
VME AA+MAI LANGGG+ PDWQD VGI CLLIINS+ISFIEE+NA NA AALMA+L PK
Sbjct: 75 VMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEENNAGNAAAALMANLAPK 134
Query: 140 TKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKE 199
TKVLRDG+W EQ+AA+LVPGD+ISIK GD++PADARLLEGDPLKIDQS LTGESL TK
Sbjct: 135 TKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALTGESLPATKH 194
Query: 200 TGDEVFSGLTCKH-----------VHSFFGKAADLVDSTEVVGHFQQVLTSIGNFCICFI 248
GDEVFSG TCK VH+FFGKAA LVDST VGHFQ+VLT+IGNFCIC I
Sbjct: 195 QGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTAIGNFCICSI 254
Query: 249 TVGMILEIIVMFPIQHRLYRDRIN----------------MLSVTLAIASYRLSQRGAIT 292
+GM++EII+M+PIQHR YRD I+ +LSVT+AI S+RLSQ+GAIT
Sbjct: 255 GIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 314
Query: 293 KRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQ 352
KRMTAIEEMA MDVLCS KT LTLN+LTVD+NLIEVF++D+DKD ++LL+ARASR+ENQ
Sbjct: 315 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVILLSARASRVENQ 374
Query: 353 DAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILN 412
DAID +I+NML DPKEARA I EVHFLPFNPV+KRTAITY D+ G W+R SKGAPEQI+
Sbjct: 375 DAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHRCSKGAPEQIIE 434
Query: 413 MCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRH 472
+C K E + HEII+K AE+GLRSL VA Q VPE ++S G P F GLLPLFDPPRH
Sbjct: 435 LCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFVGLLPLFDPPRH 494
Query: 473 DSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVD 532
DS++TI RAL LGV VKMITGD LAI KETGRRLG+GTNMYPSS LL D +PVD
Sbjct: 495 DSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLENKDDTTGGVPVD 554
Query: 533 ELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAA 592
ELIEKADGF VF EHKYEIV+ LQE+KH+VGMTGDGVNDAPALKKADIGIAV AT+AA
Sbjct: 555 ELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADIGIAVDDATDAA 614
Query: 593 RGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWEYDFP 652
R A+DIVLTEPGLSVI SAVLTSR +FQ MKN I+AVSITI IVL F+L+ALIWE+DF
Sbjct: 615 RSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVALIWEFDFS 674
Query: 653 PFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAAGIVIGNYLALVTILFYWVVV 712
PFMVLIIA+LNDGTI+TISK RVK S PD WKL EIFA G+V+G Y+ALVT++F+W+
Sbjct: 675 PFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLKEIFATGVVLGTYMALVTVVFFWLAH 734
Query: 713 HTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTRSQSWSFLERPGALLMCAFV 772
T FF F VRSL EE+ + ++LQVSIISQALIFVTRS+SWSF+ERPG LL+ AF
Sbjct: 735 DTTFFSDKFGVRSLQGKDEELIAVLYLQVSIISQALIFVTRSRSWSFVERPGLLLLIAFF 794
Query: 773 LAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVR-TLSREAWNQ 831
+AQL+ATLIA YAH FA I G GWGW GVIW+YS+V YI LDI+KF R TLS +AWN
Sbjct: 795 VAQLIATLIATYAHWEFARIKGCGWGWCGVIWIYSIVTYIPLDILKFITRYTLSGKAWNN 854
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1171 bits (3029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/848 (70%), Positives = 695/848 (81%), Gaps = 29/848 (3%)
Query: 13 ENCNCGGIDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKPENKFLKFLSF 72
E +DL +P++EVF QL TR+GLSSE+ R++ FG NKLE+K E+K LKFL F
Sbjct: 5 EEIKNEAVDLENIPIEEVFEQLKCTREGLSSEEGNRRIEMFGPNKLEEKKESKILKFLGF 64
Query: 73 MWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAAL 132
MWNPLSWVME AA+MAIALANGGG+ PDW+D VGI+ LL+INS+ISFIEE+NA NA AAL
Sbjct: 65 MWNPLSWVMEMAAIMAIALANGGGKPPDWEDFVGIIVLLVINSTISFIEENNAGNAAAAL 124
Query: 133 MAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGE 192
MA+L PKTKVLRDG+W EQ+AA+LVPGDIISIK GD++PADARLLEGDPLKIDQS LTGE
Sbjct: 125 MANLAPKTKVLRDGRWGEQEAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTGE 184
Query: 193 SLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTEVVGHFQQVLTSIG 241
SL VTK GDEVFSG TCK VH+FFGKAA LVDST VGHFQ VLT+IG
Sbjct: 185 SLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQTVLTAIG 244
Query: 242 NFCICFITVGMILEIIVMFPIQHRLYRDRI----------------NMLSVTLAIASYRL 285
NFCIC I VG+++EIIVMFPIQHR YR I +LSVT+AI S++L
Sbjct: 245 NFCICSIAVGIVIEIIVMFPIQHRAYRSGIENLLVLLIGGIPIAMPTVLSVTMAIGSHKL 304
Query: 286 SQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAAR 345
SQ+GAITKRMTAIEEMA MDVLCS KT LTLN+L+VD+NL+EVF + +DKD ++LLAAR
Sbjct: 305 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFTKGVDKDHVLLLAAR 364
Query: 346 ASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKG 405
ASR ENQDAIDAA++ MLADPKEARA I EVHFLPFNPVDKRTA+TY D++GNW+RASKG
Sbjct: 365 ASRTENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDADGNWHRASKG 424
Query: 406 APEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLP 465
APEQIL +C KE++ KVH +I+K AE+GLRSLAVA QEVPE +++S GGP F GLLP
Sbjct: 425 APEQILTLCNCKEDVKRKVHAVIDKYAERGLRSLAVARQEVPEKSKESAGGPWQFVGLLP 484
Query: 466 LFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDE 525
LFDPPRHDS++TI +AL LGV VKMITGD LAI KETGRRLG+GTNMYPSS LLG++KD
Sbjct: 485 LFDPPRHDSAETIRKALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDA 544
Query: 526 N-EALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA 584
+ EALPVDELIEKADGF VF EHKYEIVK LQEKKH+VGMTGDGVNDAPALKKADIGIA
Sbjct: 545 SLEALPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGIA 604
Query: 585 VAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLA 644
VA AT+AAR A+DIVLTEPGLSVI SAVLTSR +FQ MKN I+AVSITI IVL F+L+A
Sbjct: 605 VADATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVLGFLLIA 664
Query: 645 LIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAAGIVIGNYLALVT 704
LIW+YDF PFMVLIIA+LNDGTI+TISK RVK S PD WKL EIFA GIV+G+YLAL+T
Sbjct: 665 LIWKYDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGSYLALMT 724
Query: 705 ILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTRSQSWSFLERPG 764
++F+W + TDFF F VRS+ ++ E+ SA++LQVSI+SQALIFVTRS+SWSF+ERPG
Sbjct: 725 VIFFWAMHKTDFFTDKFGVRSIRNSEHEMMSALYLQVSIVSQALIFVTRSRSWSFIERPG 784
Query: 765 ALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVR-T 823
LL+ AF+LAQLVAT +AVYA+ FA I GIGWGWAGVIWLYS+VFY LDI KF +R
Sbjct: 785 LLLVTAFMLAQLVATFLAVYANWGFARIKGIGWGWAGVIWLYSIVFYFPLDIFKFFIRFV 844
Query: 824 LSREAWNQ 831
LS AW+
Sbjct: 845 LSGRAWDN 852
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1164 bits (3011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 589/841 (70%), Positives = 695/841 (82%), Gaps = 29/841 (3%)
Query: 20 IDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKPENKFLKFLSFMWNPLSW 79
+DL ++P++EVF QL TR+GLS+++ RL+ FG NKLE+K E+K LKFL FMWNPLSW
Sbjct: 15 VDLEKIPIEEVFEQLKCTREGLSADEGASRLQIFGPNKLEEKNESKILKFLGFMWNPLSW 74
Query: 80 VMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPK 139
VME AA+MAIALANG G+ PDWQD +GI+CLL+INS+ISFIEE+NA NA AALMA L PK
Sbjct: 75 VMEAAAVMAIALANGDGKPPDWQDFIGIICLLVINSTISFIEENNAGNAAAALMAGLAPK 134
Query: 140 TKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKE 199
TKVLRDG+W EQ+AA+LVPGDIIS+K GD+IPADARLLEGDPLKIDQS LTGESL VTK
Sbjct: 135 TKVLRDGRWSEQEAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKN 194
Query: 200 TGDEVFSGLTCKH-----------VHSFFGKAADLVDSTEVVGHFQQVLTSIGNFCICFI 248
GDEVFSG TCK VH+FFGKAA LVDST VGHFQ+VLT+IGNFCIC I
Sbjct: 195 PGDEVFSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTAIGNFCICSI 254
Query: 249 TVGMILEIIVMFPIQHRLYRDRIN----------------MLSVTLAIASYRLSQRGAIT 292
+GM++EIIVM+PIQHR YRD I+ +LSVT+AI S+RLSQ+GAIT
Sbjct: 255 AIGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 314
Query: 293 KRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQ 352
KRMTAIEEMA MDVLCS KT LTLN+L+VDRNL+EVF + +DK+ ++LLAARASR+ENQ
Sbjct: 315 KRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDKEYVLLLAARASRVENQ 374
Query: 353 DAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILN 412
DAIDA ++ MLADPKEARA I EVHFLPFNPVDKRTA+TY D+ NW+RASKGAPEQIL+
Sbjct: 375 DAIDACMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDNNNNWHRASKGAPEQILD 434
Query: 413 MCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRH 472
+C KE++ KVH +++K AE+GLRSLAVA + VPE +++SPGG F GLLPLFDPPRH
Sbjct: 435 LCNAKEDVRRKVHSMMDKYAERGLRSLAVARRTVPEKSKESPGGRWEFVGLLPLFDPPRH 494
Query: 473 DSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEA-LPV 531
DS++TI RAL LGV VKMITGD LAIAKETGRRLG+GTNMYPS+ LLG+DKD A LP+
Sbjct: 495 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDSAIASLPI 554
Query: 532 DELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEA 591
+ELIEKADGF VF EHKYEIVK LQE+KH+VGMTGDGVNDAPALKKADIGIAVA AT+A
Sbjct: 555 EELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDA 614
Query: 592 ARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWEYDF 651
ARGA+DIVLTEPGLSVI SAVLTSR +FQ MKN I+AVSITI IV F+ +ALIW+YDF
Sbjct: 615 ARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKYDF 674
Query: 652 PPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAAGIVIGNYLALVTILFYWVV 711
FMVLIIA+LNDGTI+TISK RVK S PD WKL EIFA G+V+G Y AL+T++F+W +
Sbjct: 675 SAFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGVVLGGYQALMTVVFFWAM 734
Query: 712 VHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTRSQSWSFLERPGALLMCAF 771
TDFF F V+SL ++ EE+ SA++LQVSIISQALIFVTRS+SWSFLERPG LL+ AF
Sbjct: 735 HDTDFFSDKFGVKSLRNSDEEMMSALYLQVSIISQALIFVTRSRSWSFLERPGMLLVIAF 794
Query: 772 VLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVR-TLSREAWN 830
++AQLVATLIAVYA+ +FA + G GWGWAGVIWLYS++FY+ LDI+KF +R LS +AWN
Sbjct: 795 MIAQLVATLIAVYANWAFARVKGCGWGWAGVIWLYSIIFYLPLDIMKFAIRYILSGKAWN 854
Query: 831 Q 831
Sbjct: 855 N 855
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=AHA8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1163 bits (3008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 581/841 (69%), Positives = 686/841 (81%), Gaps = 29/841 (3%)
Query: 20 IDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKPENKFLKFLSFMWNPLSW 79
+DL R+P++EVF QL +++GLSS++ RL+ FG+NKLE+K ENKFLKFL FMWNPLSW
Sbjct: 15 VDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKFLGFMWNPLSW 74
Query: 80 VMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPK 139
VME+AA+MAI LANGGG+ PDWQD +GI+ LLIINS+ISFIEE+NA NA AALMA+L PK
Sbjct: 75 VMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNAAAALMANLAPK 134
Query: 140 TKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKE 199
TKVLRDG+W EQ+A++LVPGD+ISIK GD++PADARLLEGDPLKIDQS LTGESL TK
Sbjct: 135 TKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALTGESLPTTKH 194
Query: 200 TGDEVFSGLTCKH-----------VHSFFGKAADLVDSTEVVGHFQQVLTSIGNFCICFI 248
GDEVFSG TCK VH+FFGKAA LVDST VGHFQ+VLTSIGNFCIC I
Sbjct: 195 PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTSIGNFCICSI 254
Query: 249 TVGMILEIIVMFPIQHRLYRDRIN----------------MLSVTLAIASYRLSQRGAIT 292
+GM++EI++M+PIQHR YRD I+ +LSVT+AI S+RLSQ+GAIT
Sbjct: 255 GLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 314
Query: 293 KRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQ 352
KRMTAIEEMA MDVLCS KT LTLN+L+VD++LIEVF ++MD D +VL+AARASR+ENQ
Sbjct: 315 KRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMAARASRIENQ 374
Query: 353 DAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILN 412
DAIDA+I+ ML DPKEARA I EVHFLPFNPVDKRTAITY D G+W+R+SKGAPEQI+
Sbjct: 375 DAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSSKGAPEQIIE 434
Query: 413 MCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRH 472
+C + E K HE+I+ AE+GLRSL VA Q VPE T++S G P F GLLPLFDPPRH
Sbjct: 435 LCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGLLPLFDPPRH 494
Query: 473 DSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDEN-EALPV 531
DS++TI RAL+LGV VKMITGD LAI ETGRRLG+GTNMYPS+ LLG KDE+ +P+
Sbjct: 495 DSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSKDESLVGIPI 554
Query: 532 DELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEA 591
DELIEKADGF VF EHKYEIVK LQE+KH+ GMTGDGVNDAPALKKADIGIAVA AT+A
Sbjct: 555 DELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDA 614
Query: 592 ARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWEYDF 651
AR A+DIVLTEPGLSVI SAVLTSR +FQ MKN I+AVSITI IVL F+L+ALIW +DF
Sbjct: 615 ARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVALIWRFDF 674
Query: 652 PPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAAGIVIGNYLALVTILFYWVV 711
PFMVLIIA+LNDGTI+TISK RVK S PD WKLNEIFA G+V+G Y+AL T+LF+W+
Sbjct: 675 APFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGTYMALTTVLFFWLA 734
Query: 712 VHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTRSQSWSFLERPGALLMCAF 771
TDFF F VRS+ N EE+ +A++LQVSIISQALIFVTRS+SWSF+ERPG LL+ AF
Sbjct: 735 HDTDFFSKTFGVRSIQGNEEELMAALYLQVSIISQALIFVTRSRSWSFVERPGFLLLIAF 794
Query: 772 VLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVR-TLSREAWN 830
V+AQLVATLIAVYA+ FA I G GWGWAG IW+YS++ YI LDI+KF +R L+ +AW+
Sbjct: 795 VIAQLVATLIAVYANWGFARIVGCGWGWAGGIWVYSIITYIPLDILKFIIRYALTGKAWD 854
Query: 831 Q 831
Sbjct: 855 N 855
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SU58|PMA4_ARATH ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=AHA4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1155 bits (2989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/845 (69%), Positives = 688/845 (81%), Gaps = 33/845 (3%)
Query: 19 GIDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKPENKFLKFLSFMWNPLS 78
+DL +P++EVF L +++GL+++ A+ RL FG NKLE+K E+KFLKFL FMWNPLS
Sbjct: 19 AVDLENVPIEEVFENLRCSKEGLTTQAADERLALFGHNKLEEKKESKFLKFLGFMWNPLS 78
Query: 79 WVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTP 138
WVME AA+MAIALANGGG+ PDWQD VGI+ LL+INS+ISFIEE+NA NA AALMA L P
Sbjct: 79 WVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAP 138
Query: 139 KTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTK 198
K KVLRDG+W EQDAA+LVPGDIISIK GD++PADARLLEGDPLKIDQS LTGESL VTK
Sbjct: 139 KAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTK 198
Query: 199 ETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTEVVGHFQQVLTSIGNFCICF 247
+GD V+SG TCK VH+FFGKAA LVD+T +GHFQQVLT+IGNFCIC
Sbjct: 199 SSGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQIGHFQQVLTAIGNFCICS 258
Query: 248 ITVGMILEIIVMFPIQHRLYRDRIN----------------MLSVTLAIASYRLSQRGAI 291
I VGM++EI+VM+PIQHR YR I+ +LSVT+AI S+RLSQ+GAI
Sbjct: 259 IAVGMLIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 318
Query: 292 TKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLEN 351
TKRMTAIEEMA MDVLCS KT LTLN+LTVD+NLIEVF + +D D +VL+AARASRLEN
Sbjct: 319 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTVVLMAARASRLEN 378
Query: 352 QDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQIL 411
QDAIDAAI+ MLADPK+ARA I EVHFLPFNP DKRTA+TY D+EGN +R SKGAPEQIL
Sbjct: 379 QDAIDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNTHRVSKGAPEQIL 438
Query: 412 NMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPR 471
N+ K EI +VH +I+K AE+GLRSLAVA Q+VPE +DS GGP F GL+PLFDPPR
Sbjct: 439 NLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQFVGLMPLFDPPR 498
Query: 472 HDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDEN-EALP 530
HDS++TI RAL LGV VKMITGD LAI KETGRRLG+GTNMYPSS LLG++KDE+ ALP
Sbjct: 499 HDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIVALP 558
Query: 531 VDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATE 590
VDELIEKADGF VF EHKYEIVK LQ +KH+ GMTGDGVNDAPALKKADIGIAVA AT+
Sbjct: 559 VDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATD 618
Query: 591 AARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWEYD 650
AAR A+DIVLTEPGLSVI SAVLTSR +FQ MKN I+AVSITI IVL F+LLALIW++D
Sbjct: 619 AARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWQFD 678
Query: 651 FPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAAGIVIGNYLALVTILFYWV 710
FPPFMVLIIA+LNDGTI+TISK RVK S PD WKL+EIFA G+V G+Y+A++T++F+WV
Sbjct: 679 FPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFGSYMAMMTVIFFWV 738
Query: 711 VVHTDFFETHFHVRSLSSNTEE----ISSAVHLQVSIISQALIFVTRSQSWSFLERPGAL 766
TDFF F V +L + ++SA++LQVSIISQALIFVTRS+SWSF+ERPG
Sbjct: 739 SYKTDFFPRTFGVATLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSFVERPGIF 798
Query: 767 LMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVR-TLS 825
LM AF+LAQLVATLIAVYA+ SFA I GIGWGWAGVIWLY+++FYI LD IKF +R LS
Sbjct: 799 LMIAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDFIKFFIRYALS 858
Query: 826 REAWN 830
AW+
Sbjct: 859 GRAWD 863
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1152 bits (2980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/844 (69%), Positives = 687/844 (81%), Gaps = 33/844 (3%)
Query: 20 IDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKPENKFLKFLSFMWNPLSW 79
+DL +P++EVF L +R+GL++E A+ RL FG NKLE+K E+KFLKFL FMWNPLSW
Sbjct: 16 VDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKESKFLKFLGFMWNPLSW 75
Query: 80 VMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPK 139
VME AA+MAIALANGGG+ PDWQD VGI+ LL+INS+ISFIEE+NA NA AALMA L PK
Sbjct: 76 VMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPK 135
Query: 140 TKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKE 199
KVLRDG+W EQDAA+LVPGDIISIK GD++PADARLLEGDPLKIDQS LTGESL VTK
Sbjct: 136 AKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSSLTGESLPVTKG 195
Query: 200 TGDEVFSGLTCKH-----------VHSFFGKAADLVDSTEVVGHFQQVLTSIGNFCICFI 248
GD V+SG TCK VH+FFGKAA LVD+T VGHFQQVLT+IGNFCIC I
Sbjct: 196 PGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNHVGHFQQVLTAIGNFCICSI 255
Query: 249 TVGMILEIIVMFPIQHRLYRDRIN----------------MLSVTLAIASYRLSQRGAIT 292
VGMI+EI+VM+PIQHR YR I+ +LSVT+AI S+RLSQ+GAIT
Sbjct: 256 AVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 315
Query: 293 KRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQ 352
KRMTAIEEMA MDVLCS KT LTLN+LTVD+NLIEVF + +D D +VL+AA+ASRLENQ
Sbjct: 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRLENQ 375
Query: 353 DAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILN 412
DAIDAAI+ MLADPKEARA + EVHFLPFNP DKRTA+TY DS+G +R SKGAPEQILN
Sbjct: 376 DAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGKMHRVSKGAPEQILN 435
Query: 413 MCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRH 472
+ + EI +VH +I+K AE+GLRSLAVA QEVPE T++S GGP F GL+PLFDPPRH
Sbjct: 436 LAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFMGLMPLFDPPRH 495
Query: 473 DSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDEN-EALPV 531
DS++TI RAL LGV VKMITGD LAI KETGRRLG+GTNMYPSS LLG+ KDE+ ALP+
Sbjct: 496 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQHKDESIGALPI 555
Query: 532 DELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEA 591
D+LIEKADGF VF EHKYEIVK LQ +KH+ GMTGDGVNDAPALKKADIGIAVA AT+A
Sbjct: 556 DDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDA 615
Query: 592 ARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWEYDF 651
AR A+DIVLTEPGLSVI SAVLTSR +FQ MKN I+AVSITI IVL F+LLALIW++DF
Sbjct: 616 ARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDF 675
Query: 652 PPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAAGIVIGNYLALVTILFYWVV 711
PPFMVLIIA+LNDGTI+TISK RVK S PD WKL+EIFA G+V G+Y+A++T++F+W
Sbjct: 676 PPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFGSYMAMMTVIFFWAA 735
Query: 712 VHTDFFETHFHVRSLSSNTEE----ISSAVHLQVSIISQALIFVTRSQSWSFLERPGALL 767
TDFF F V +L + ++SA++LQVSIISQALIFVTRS+SWS++ERPG LL
Sbjct: 736 YKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSYVERPGMLL 795
Query: 768 MCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVR-TLSR 826
+ AF+LAQLVATLIAVYA+ SFA I GIGWGWAGVIWLY++VFYI LDIIKF +R LS
Sbjct: 796 VVAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYIPLDIIKFLIRYALSG 855
Query: 827 EAWN 830
AW+
Sbjct: 856 RAWD 859
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P83970|PMA1_WHEAT Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1150 bits (2976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 591/848 (69%), Positives = 690/848 (81%), Gaps = 29/848 (3%)
Query: 13 ENCNCGGIDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKPENKFLKFLSF 72
E +DL +P++EVF QL TRQGL+S++ R++ FG NKLE+K E+K LKFL F
Sbjct: 5 EEIRNEAVDLENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKESKVLKFLGF 64
Query: 73 MWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAAL 132
MWNPLSWVME AA+MAIALANGGG+ PDWQD VGI+ LL+INS+ISFIEE+NA NA AAL
Sbjct: 65 MWNPLSWVMEMAAIMAIALANGGGKPPDWQDFVGIIVLLVINSTISFIEENNAGNAAAAL 124
Query: 133 MAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGE 192
MA+L PKTKVLRDG+W EQ+A++LVPGDI+SIK GD++PADARLLEGDPLKIDQS LTGE
Sbjct: 125 MANLAPKTKVLRDGRWGEQEASILVPGDIVSIKLGDIVPADARLLEGDPLKIDQSGLTGE 184
Query: 193 SLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTEVVGHFQQVLTSIG 241
SL VTK GDEVFSG TCK VH+FFGKAA LVDST VGHFQQVLT+IG
Sbjct: 185 SLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQQVLTAIG 244
Query: 242 NFCICFITVGMILEIIVMFPIQHRLYRDRI----------------NMLSVTLAIASYRL 285
NFCI I VG+++EIIVMFPIQ R YR I +LSVT+AI S++L
Sbjct: 245 NFCIVSIAVGIVIEIIVMFPIQRRKYRAGIENLLVLLIGGIPIAMPTVLSVTMAIGSHKL 304
Query: 286 SQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAAR 345
SQ+GAITKRMTAIEE+A MDVLCS KT LTLN+L+VD+NL+EVF + +DK+ ++LLAAR
Sbjct: 305 SQQGAITKRMTAIEELAGMDVLCSDKTGTLTLNKLSVDKNLVEVFAKGVDKEHVLLLAAR 364
Query: 346 ASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKG 405
ASR+ENQDAIDA ++ MLADPKEARA I EVHFLPFNP DKRTA+TY D+EGNW+RASKG
Sbjct: 365 ASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPTDKRTALTYIDAEGNWHRASKG 424
Query: 406 APEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLP 465
APEQI+ +C KE++ KVH +I K AE+GLRSLAVA QEVPE ++DSPGGP F GLLP
Sbjct: 425 APEQIITLCNCKEDVKRKVHSVIEKYAERGLRSLAVARQEVPEKSKDSPGGPWQFIGLLP 484
Query: 466 LFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDE 525
LFDPPRHDS++TI +AL LGV VKMITGD LAI KETGRRLG+GTNMYPSS LLG+ KD
Sbjct: 485 LFDPPRHDSAETIRKALVLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQSKDG 544
Query: 526 N-EALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA 584
+ E+LPVDELIEKADGF VF EHKYEIVK LQEKKH+VGMTGDGVNDAPALKKADIGIA
Sbjct: 545 SLESLPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGIA 604
Query: 585 VAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLA 644
V AT+AAR A+DIVLTEPGLSVI SAVLTSR +FQ MKN I+AVSITI IVL F+L+A
Sbjct: 605 VDDATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVLGFMLIA 664
Query: 645 LIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAAGIVIGNYLALVT 704
LIW++DF PFMVLIIA+LNDGTI+TISK RVK S PD WKLNEIFA G+V+G YLALVT
Sbjct: 665 LIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGVVLGTYLALVT 724
Query: 705 ILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTRSQSWSFLERPG 764
++F+W++ TDFF F V S+ + + SA++LQVSI+SQALIFVTRS+SWSF+ERPG
Sbjct: 725 VVFFWLIHKTDFFTNKFGVESIRNTEFKEMSALYLQVSIVSQALIFVTRSRSWSFVERPG 784
Query: 765 ALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVR-T 823
LL+ AF+LAQLVATLIAVYA+ FA I GIGWGWAGVIWL+S+VFY LDI KF +R
Sbjct: 785 FLLVTAFLLAQLVATLIAVYANWDFARIKGIGWGWAGVIWLFSIVFYFPLDIFKFFIRFV 844
Query: 824 LSREAWNQ 831
LS AW+
Sbjct: 845 LSGRAWDN 852
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Triticum aestivum (taxid: 4565) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P19456|PMA2_ARATH ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=AHA2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1145 bits (2963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/846 (69%), Positives = 682/846 (80%), Gaps = 29/846 (3%)
Query: 13 ENCNCGGIDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKPENKFLKFLSF 72
E+ +DL ++P++EVF QL +R+GL++++ E R++ FG NKLE+K E+K LKFL F
Sbjct: 5 EDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLGF 64
Query: 73 MWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAAL 132
MWNPLSWVME AA+MAIALANG G+ PDWQD VGI+CLL+INS+ISFIEE+NA NA AAL
Sbjct: 65 MWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAAL 124
Query: 133 MAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGE 192
MA L PKTKVLRDG+W EQ+AA+LVPGDI+SIK GD+IPADARLLEGDPLK+DQS LTGE
Sbjct: 125 MAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGE 184
Query: 193 SLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTEVVGHFQQVLTSIG 241
SL VTK G EVFSG TCK VH+FFGKAA LVDST VGHFQ+VLT+IG
Sbjct: 185 SLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 244
Query: 242 NFCICFITVGMILEIIVMFPIQHRLYRDRIN----------------MLSVTLAIASYRL 285
NFCIC I +GM++EIIVM+PIQ R YRD I+ +LSVT+AI S+RL
Sbjct: 245 NFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 304
Query: 286 SQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAAR 345
SQ+GAITKRMTAIEEMA MDVLCS KT LTLN+L+VD+NL+EVF + ++KD ++L AA
Sbjct: 305 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAM 364
Query: 346 ASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKG 405
ASR+ENQDAIDAA++ MLADPKEARA I EVHFLPFNPVDKRTA+TY D GNW+R SKG
Sbjct: 365 ASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKG 424
Query: 406 APEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLP 465
APEQIL + + ++ KV II+K AE+GLRSLAVA Q VPE T++SPG P F GLLP
Sbjct: 425 APEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLP 484
Query: 466 LFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDE 525
LFDPPRHDS++TI RAL LGV VKMITGD LAI KETGRRLG+GTNMYPSS LLG KD
Sbjct: 485 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDA 544
Query: 526 NEA-LPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA 584
N A +PV+ELIEKADGF VF EHKYEIVK LQE+KH+VGMTGDGVNDAPALKKADIGIA
Sbjct: 545 NLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIA 604
Query: 585 VAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLA 644
VA AT+AARGA+DIVLTEPGLSVI SAVLTSR +FQ MKN I+AVSITI IV F+L+A
Sbjct: 605 VADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIA 664
Query: 645 LIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAAGIVIGNYLALVT 704
LIWE+DF FMVLIIA+LNDGTI+TISK RVK S PD WKL EIFA G+V+G Y A++T
Sbjct: 665 LIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAIMT 724
Query: 705 ILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTRSQSWSFLERPG 764
++F+W TDFF F VRS+ N E+ AV+LQVSIISQALIFVTRS+SWSF+ERPG
Sbjct: 725 VIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVERPG 784
Query: 765 ALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVR-T 823
ALLM AF++AQL+ATLIAVYA+ FA I GIGWGWAGVIWLYS+V Y LD+ KF +R
Sbjct: 785 ALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYI 844
Query: 824 LSREAW 829
LS +AW
Sbjct: 845 LSGKAW 850
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P20649|PMA1_ARATH ATPase 1, plasma membrane-type OS=Arabidopsis thaliana GN=AHA1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 1145 bits (2962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 586/846 (69%), Positives = 685/846 (80%), Gaps = 29/846 (3%)
Query: 13 ENCNCGGIDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKPENKFLKFLSF 72
E+ +DL ++P++EVF QL TR+GL++++ E R+ FG NKLE+K E+K LKFL F
Sbjct: 5 EDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLGF 64
Query: 73 MWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAAL 132
MWNPLSWVME AALMAIALANG + PDWQD VGI+CLL+INS+ISFIEE+NA NA AAL
Sbjct: 65 MWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAAL 124
Query: 133 MAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGE 192
MA L PKTKVLRDG+W EQ+AA+LVPGDI+SIK GD+IPADARLLEGDPLK+DQS LTGE
Sbjct: 125 MAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGE 184
Query: 193 SLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTEVVGHFQQVLTSIG 241
SL VTK G EVFSG TCK VH+FFGKAA LVDST VGHFQ+VLTSIG
Sbjct: 185 SLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSIG 244
Query: 242 NFCICFITVGMILEIIVMFPIQHRLYRDRIN----------------MLSVTLAIASYRL 285
NFCIC I +G+ +EI+VM+PIQHR YRD I+ +LSVT+AI S+RL
Sbjct: 245 NFCICSIAIGIAIEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 304
Query: 286 SQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAAR 345
SQ+GAITKRMTAIEEMA MDVLCS KT LTLN+L+VD+NL+EVF + ++KD ++L AA
Sbjct: 305 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAM 364
Query: 346 ASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKG 405
ASR+ENQDAIDAA++ MLADPKEARA I EVHFLPFNPVDKRTA+TY DS+GNW+R SKG
Sbjct: 365 ASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSKG 424
Query: 406 APEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLP 465
APEQIL++ + ++ KV I+K AE+GLRSLAVA Q VPE T++SPGGP F GLLP
Sbjct: 425 APEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLLP 484
Query: 466 LFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDE 525
LFDPPRHDS++TI RAL LGV VKMITGD LAI KETGRRLG+GTNMYPS+ LLG DKD
Sbjct: 485 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKDS 544
Query: 526 NEA-LPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA 584
N A +PV+ELIEKADGF VF EHKYEIVK LQE+KH+VGMTGDGVNDAPALKKADIGIA
Sbjct: 545 NIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIA 604
Query: 585 VAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLA 644
VA AT+AARGA+DIVLTEPGLSVI SAVLTSR +FQ MKN I+AVSITI IV F+L+A
Sbjct: 605 VADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIA 664
Query: 645 LIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAAGIVIGNYLALVT 704
LIWE+DF FMVLIIA+LNDGTI+TISK RVK S PD WKL EIFA GIV+G Y A+++
Sbjct: 665 LIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGIVLGGYQAIMS 724
Query: 705 ILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTRSQSWSFLERPG 764
++F+W TDFF F VRS+ N +E+ AV+LQVSIISQALIFVTRS+SWSF+ERPG
Sbjct: 725 VIFFWAAHKTDFFSDKFGVRSIRDNNDELMGAVYLQVSIISQALIFVTRSRSWSFVERPG 784
Query: 765 ALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVR-T 823
ALLM AFV+AQLVATLIAVYA +FA + GIGWGWAGVIW+YS+V Y DI+KF +R
Sbjct: 785 ALLMIAFVIAQLVATLIAVYADWTFAKVKGIGWGWAGVIWIYSIVTYFPQDILKFAIRYI 844
Query: 824 LSREAW 829
LS +AW
Sbjct: 845 LSGKAW 850
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 831 | ||||||
| 224138528 | 950 | autoinhibited H+ ATPase [Populus trichoc | 0.998 | 0.873 | 0.806 | 0.0 | |
| 359482987 | 952 | PREDICTED: ATPase 10, plasma membrane-ty | 0.997 | 0.870 | 0.806 | 0.0 | |
| 147853720 | 938 | hypothetical protein VITISV_027896 [Viti | 0.997 | 0.883 | 0.797 | 0.0 | |
| 297742915 | 970 | unnamed protein product [Vitis vinifera] | 0.997 | 0.854 | 0.789 | 0.0 | |
| 5669167 | 950 | plasma membrane proton ATPase [Nicotiana | 0.998 | 0.873 | 0.773 | 0.0 | |
| 356506116 | 934 | PREDICTED: ATPase 10, plasma membrane-ty | 0.998 | 0.888 | 0.773 | 0.0 | |
| 84627379 | 950 | P-type ATPase [Petunia x hybrida] gi|115 | 0.998 | 0.873 | 0.773 | 0.0 | |
| 42562116 | 947 | H+-transporting ATPase [Arabidopsis thal | 0.998 | 0.876 | 0.733 | 0.0 | |
| 15217282 | 941 | Putative plasma membrane proton ATPase [ | 0.991 | 0.875 | 0.734 | 0.0 | |
| 222624320 | 956 | hypothetical protein OsJ_09682 [Oryza sa | 0.991 | 0.861 | 0.734 | 0.0 |
| >gi|224138528|ref|XP_002326625.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222833947|gb|EEE72424.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1392 bits (3602), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 692/858 (80%), Positives = 750/858 (87%), Gaps = 28/858 (3%)
Query: 1 MPEDLEKPLLDPENCNCGGIDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEK 60
M EDLEKPLL+PE+ N GIDL RLPL+EVF QL T+ +GLSSEDAE RL FG NKLE+
Sbjct: 1 MAEDLEKPLLNPESFNREGIDLERLPLEEVFEQLRTSHRGLSSEDAEARLMIFGPNKLEE 60
Query: 61 KPENKFLKFLSFMWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFI 120
KPENKFLKFL FMWNPLSWVME AA+MAIALANGGGQGPDWQD VGI+CLLIINS+ISF+
Sbjct: 61 KPENKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGQGPDWQDFVGIICLLIINSTISFV 120
Query: 121 EESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGD 180
EE+NA NA +ALMA L PKTKVLRDGQWKEQDAA+LVPGDIISIK GD+IPAD+RLLEGD
Sbjct: 121 EENNAGNAASALMARLAPKTKVLRDGQWKEQDAAILVPGDIISIKLGDIIPADSRLLEGD 180
Query: 181 PLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTEV 229
LKIDQ+ LTGESL VTK TGDEV+SG TCK V+SFFGKAA LVDSTEV
Sbjct: 181 SLKIDQATLTGESLPVTKRTGDEVYSGSTCKQGEIEAVVIATGVNSFFGKAAHLVDSTEV 240
Query: 230 VGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRIN----------------M 273
VGHFQ+VLT+IGNFCIC I VGMILEII+MFP+QHR YRD IN +
Sbjct: 241 VGHFQKVLTAIGNFCICSIAVGMILEIIIMFPVQHRSYRDGINNLLVLLIGGIPIAMPTV 300
Query: 274 LSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRD 333
LSVTLAI S+RLSQ+GAITKRMTAIEEMA MDVLCS KT LTLNRLTVDRNLIEVFN+D
Sbjct: 301 LSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNKD 360
Query: 334 MDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYT 393
MDKD++VLLAARASRLENQDAIDAAI+NMLADPKEAR NI EVHFLPFNPVDKRTAITY
Sbjct: 361 MDKDMIVLLAARASRLENQDAIDAAIVNMLADPKEARENIREVHFLPFNPVDKRTAITYI 420
Query: 394 DSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDS 453
DS+GNWYRASKGAPEQILNM +EK+EI GKVH II K AE+GLRSL VA QEVPE T +S
Sbjct: 421 DSDGNWYRASKGAPEQILNMSKEKDEISGKVHAIIEKFAERGLRSLGVAFQEVPEKTRES 480
Query: 454 PGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY 513
PGGP +FCGLLPLFDPPRHDS++TI RAL LGV VKMITGD LAIAKETGRRLG+GTNMY
Sbjct: 481 PGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY 540
Query: 514 PSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDA 573
PSS LLGRD+DENEALPVDELIEKADGF VF EHKYEIVKILQEKKHVVGMTGDGVNDA
Sbjct: 541 PSSTLLGRDRDENEALPVDELIEKADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDA 600
Query: 574 PALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSIT 633
PALKKADIGIAVA +T+AAR A+DIVLTEPGLSVI SAVLTSR +FQ MKN I+AVSIT
Sbjct: 601 PALKKADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 660
Query: 634 IHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAAG 693
I IVL F LLALIWEYDFPPFMVLIIA+LNDGTI+TIS+ RVK S RPD WKL EIFA G
Sbjct: 661 IRIVLGFALLALIWEYDFPPFMVLIIAILNDGTIMTISQDRVKPSPRPDSWKLEEIFATG 720
Query: 694 IVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTR 753
IVIG YLALVT+LFYW+V+ T+FFETHFHVRS+SSNTEE+SSAV+LQVSIISQALIFVTR
Sbjct: 721 IVIGTYLALVTVLFYWIVIDTNFFETHFHVRSISSNTEEVSSAVYLQVSIISQALIFVTR 780
Query: 754 SQSWSFLERPGALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYIL 813
SQSWSFLERPG LLMCAFV+AQLVAT+IAVYAHISFAYI GIGWGWAGVIWLYSLVFY+
Sbjct: 781 SQSWSFLERPGILLMCAFVVAQLVATIIAVYAHISFAYIRGIGWGWAGVIWLYSLVFYVP 840
Query: 814 LDIIKFTVR-TLSREAWN 830
LDIIKFT+R LS EAWN
Sbjct: 841 LDIIKFTIRYALSGEAWN 858
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359482987|ref|XP_002263048.2| PREDICTED: ATPase 10, plasma membrane-type-like isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1371 bits (3549), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 694/861 (80%), Positives = 746/861 (86%), Gaps = 32/861 (3%)
Query: 1 MPEDLEKPLLDPENCNCGGIDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEK 60
M EDL+KPLLDPEN N GIDL R+PL+EVF QL T+R GLSSEDAE RL FG NKLE+
Sbjct: 1 MAEDLDKPLLDPENFNREGIDLERIPLEEVFEQLRTSRGGLSSEDAEARLIIFGPNKLEE 60
Query: 61 KPENKFLKFLSFMWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFI 120
KPENKFLKFLSFMWNPLSWVME AA+MAI LANGGG+GPDWQD VGI+CLLIINS+ISFI
Sbjct: 61 KPENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGEGPDWQDFVGILCLLIINSTISFI 120
Query: 121 EESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGD 180
EE+NA NA AALMA L PKTKVLRDG W+EQDAA+LVPGDIISIK GD+IPADARLLEGD
Sbjct: 121 EENNAGNAAAALMARLAPKTKVLRDGHWQEQDAAILVPGDIISIKLGDIIPADARLLEGD 180
Query: 181 PLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTEV 229
PLKIDQS LTGESL VTK TGDEVFSG TCKH VHSFFGKAA LVDSTEV
Sbjct: 181 PLKIDQSALTGESLPVTKRTGDEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEV 240
Query: 230 VGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRIN----------------M 273
+GHFQ+VLTSIGNFCIC I VGMILEIIVMFPIQHR YR+ IN +
Sbjct: 241 IGHFQKVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRNGINNLLVLLIGGIPIAMPTV 300
Query: 274 LSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRD 333
LSVTLAI S+RLSQ+GAITKRMTAIEEMA MDVLCS KT LTLNRLTVDRNLIEVF +D
Sbjct: 301 LSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFAKD 360
Query: 334 MDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYT 393
MDKD +VLLAARASRLENQDAID AIINMLADPKEARANI EVHFLPFNPVDKRTAITY
Sbjct: 361 MDKDTVVLLAARASRLENQDAIDTAIINMLADPKEARANITEVHFLPFNPVDKRTAITYI 420
Query: 394 DSEGNWYRASKGAPEQ---ILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMT 450
DS GNW RASKGAPEQ ILN+CQEKEEI GKVH II+K AE+GLRSL VA QEVPE T
Sbjct: 421 DSNGNWIRASKGAPEQYPHILNLCQEKEEIAGKVHAIIDKFAERGLRSLGVAYQEVPEQT 480
Query: 451 EDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGT 510
++SPGGP +FCGLLPLFDPPRHDS++TI RAL LGVCVKMITGD LAIAKETGRRLG+GT
Sbjct: 481 KESPGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGT 540
Query: 511 NMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGV 570
NMYPSS LLGR+KDE+E LPVDELIEKADGF VF EHKYEIV+ILQEKKHV GMTGDGV
Sbjct: 541 NMYPSSSLLGREKDESEVLPVDELIEKADGFAGVFPEHKYEIVRILQEKKHVCGMTGDGV 600
Query: 571 NDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAV 630
NDAPALKKADIGIAVA AT+AAR AADIVLTEPGLSVI SAVLTSR +FQ MKN I+AV
Sbjct: 601 NDAPALKKADIGIAVADATDAARSAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 660
Query: 631 SITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIF 690
SITI IVL FVLLALIWEYDFPPFMVLIIA+LNDGTI+TISK RVK S +PD WKLNEIF
Sbjct: 661 SITIRIVLGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPKPDSWKLNEIF 720
Query: 691 AAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIF 750
A G+VIG YLALVT+LFYWV+ T FF+THFHV +L S TEEISSA++LQVSIISQALIF
Sbjct: 721 ATGVVIGTYLALVTVLFYWVIDSTTFFQTHFHVSTLKS-TEEISSAIYLQVSIISQALIF 779
Query: 751 VTRSQSWSFLERPGALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVF 810
VTRSQSWSF+ERPGALLMCAFV+AQLVATLIAVYA ISFA ISGIGWGWAGVIW+YS++F
Sbjct: 780 VTRSQSWSFMERPGALLMCAFVVAQLVATLIAVYAEISFASISGIGWGWAGVIWIYSVIF 839
Query: 811 YILLDIIKFTVR-TLSREAWN 830
Y+ LDIIKFTVR LS EAWN
Sbjct: 840 YVPLDIIKFTVRYALSGEAWN 860
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147853720|emb|CAN80223.1| hypothetical protein VITISV_027896 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1367 bits (3539), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 694/870 (79%), Positives = 746/870 (85%), Gaps = 41/870 (4%)
Query: 1 MPEDLEKPLLDPENCNCGGIDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEK 60
M EDL+KPLLDPEN N GIDL R+PL+EVF QL T+R GLSSEDAE RL FG NKLE+
Sbjct: 1 MAEDLDKPLLDPENFNREGIDLERIPLEEVFEQLRTSRGGLSSEDAEARLIIFGPNKLEE 60
Query: 61 KPENKFLKFLSFMWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFI 120
KPENKFLKFLSFMWNPLSWVME AA+MAI LANGGG+GPDWQD VGI+CLLIINS+ISFI
Sbjct: 61 KPENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGEGPDWQDFVGILCLLIINSTISFI 120
Query: 121 EESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGD 180
EE+NA NA AALMA L PKTKVLRDG W+EQDAA+LVPGDIISIK GD+IPADARLLEGD
Sbjct: 121 EENNAGNAAAALMARLAPKTKVLRDGHWQEQDAAILVPGDIISIKLGDIIPADARLLEGD 180
Query: 181 PLKIDQ------------SELTGESLTVTKETGDEVFSGLTCKH-----------VHSFF 217
PLKIDQ S LTGESL VTK TGDEVFSG TCKH VHSFF
Sbjct: 181 PLKIDQANIFDKLNCFSLSALTGESLPVTKRTGDEVFSGSTCKHGEIEAVVIATGVHSFF 240
Query: 218 GKAADLVDSTEVVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRIN----- 272
GKAA LVDSTEV+GHFQ+VLTSIGNFCIC I VGMILEIIVMFPIQHR YR+ IN
Sbjct: 241 GKAAHLVDSTEVIGHFQKVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRNGINNLLVL 300
Query: 273 -----------MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLT 321
+LSVTLAI S+RLSQ+GAITKRMTAIEEMA MDVLCS KT LTLNRLT
Sbjct: 301 LIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLT 360
Query: 322 VDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPF 381
VDRNLIEVF +DMDKD +VLLAARASRLENQDAID AIINMLADPKEARANI EVHFLPF
Sbjct: 361 VDRNLIEVFAKDMDKDTVVLLAARASRLENQDAIDTAIINMLADPKEARANITEVHFLPF 420
Query: 382 NPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAV 441
NPVDKRTAITY DS GNW RASKGAPEQILN+CQEKEEI GKVH II+K AE+GLRSL V
Sbjct: 421 NPVDKRTAITYIDSNGNWIRASKGAPEQILNLCQEKEEIAGKVHAIIDKFAERGLRSLGV 480
Query: 442 AVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKE 501
A QEVPE T++SPGGP +FCGLLPLFDPPRHDS++TI RAL LGVCVKMITGD LAIAKE
Sbjct: 481 AYQEVPEQTKESPGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKE 540
Query: 502 TGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKH 561
TGRRLG+GTNMYPSS LLGR+KDE+E LPVDELIEKADGF VF EHKYEIV+ILQEKKH
Sbjct: 541 TGRRLGMGTNMYPSSSLLGREKDESEVLPVDELIEKADGFAGVFPEHKYEIVRILQEKKH 600
Query: 562 VVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQI 621
V GMTGDGVNDAPALKKADIGIAVA AT+AAR AADIVLTEPGLSVI SAVLTSR +FQ
Sbjct: 601 VCGMTGDGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLSVIISAVLTSRAIFQR 660
Query: 622 MKNCMIHAVSITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSLRP 681
MKN I+AVSITI IVL FVLLALIWEYDFPPFMVLIIA+LNDGTI+TISK RVK S +P
Sbjct: 661 MKNYTIYAVSITIRIVLGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPKP 720
Query: 682 DGWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQV 741
D WKLNEIFA G+VIG YLALVT+LFYWV+ T FF+THFHV +L S TEEISSA++LQV
Sbjct: 721 DSWKLNEIFATGVVIGTYLALVTVLFYWVIDSTTFFQTHFHVSTLKS-TEEISSAIYLQV 779
Query: 742 SIISQALIFVTRSQSWSFLERPGALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAG 801
SIISQALIFVTRSQSWSF+ERPGALLMCAFV+AQLVATLIAVYA ISFA ISGIGWGWAG
Sbjct: 780 SIISQALIFVTRSQSWSFMERPGALLMCAFVVAQLVATLIAVYAEISFASISGIGWGWAG 839
Query: 802 VIWLYSLVFYILLDIIKFTVR-TLSREAWN 830
VIW+YS++FY+ LDIIKFTVR LS EAWN
Sbjct: 840 VIWIYSVIFYVPLDIIKFTVRYALSGEAWN 869
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297742915|emb|CBI35782.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1364 bits (3530), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 694/879 (78%), Positives = 746/879 (84%), Gaps = 50/879 (5%)
Query: 1 MPEDLEKPLLDPENCNCGGIDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEK 60
M EDL+KPLLDPEN N GIDL R+PL+EVF QL T+R GLSSEDAE RL FG NKLE+
Sbjct: 1 MAEDLDKPLLDPENFNREGIDLERIPLEEVFEQLRTSRGGLSSEDAEARLIIFGPNKLEE 60
Query: 61 KPENKFLKFLSFMWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFI 120
KPENKFLKFLSFMWNPLSWVME AA+MAI LANGGG+GPDWQD VGI+CLLIINS+ISFI
Sbjct: 61 KPENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGEGPDWQDFVGILCLLIINSTISFI 120
Query: 121 EESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGD 180
EE+NA NA AALMA L PKTKVLRDG W+EQDAA+LVPGDIISIK GD+IPADARLLEGD
Sbjct: 121 EENNAGNAAAALMARLAPKTKVLRDGHWQEQDAAILVPGDIISIKLGDIIPADARLLEGD 180
Query: 181 PLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTEV 229
PLKIDQS LTGESL VTK TGDEVFSG TCKH VHSFFGKAA LVDSTEV
Sbjct: 181 PLKIDQSALTGESLPVTKRTGDEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEV 240
Query: 230 VGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRIN----------------M 273
+GHFQ+VLTSIGNFCIC I VGMILEIIVMFPIQHR YR+ IN +
Sbjct: 241 IGHFQKVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRNGINNLLVLLIGGIPIAMPTV 300
Query: 274 LSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRD 333
LSVTLAI S+RLSQ+GAITKRMTAIEEMA MDVLCS KT LTLNRLTVDRNLIEVF +D
Sbjct: 301 LSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFAKD 360
Query: 334 MDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYT 393
MDKD +VLLAARASRLENQDAID AIINMLADPKEARANI EVHFLPFNPVDKRTAITY
Sbjct: 361 MDKDTVVLLAARASRLENQDAIDTAIINMLADPKEARANITEVHFLPFNPVDKRTAITYI 420
Query: 394 DSEGNWYRASKGAPEQ---------------------ILNMCQEKEEIGGKVHEIINKLA 432
DS GNW RASKGAPEQ ILN+CQEKEEI GKVH II+K A
Sbjct: 421 DSNGNWIRASKGAPEQYPHHSKKKKKQNKNSRFSFLYILNLCQEKEEIAGKVHAIIDKFA 480
Query: 433 EKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMIT 492
E+GLRSL VA QEVPE T++SPGGP +FCGLLPLFDPPRHDS++TI RAL LGVCVKMIT
Sbjct: 481 ERGLRSLGVAYQEVPEQTKESPGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVCVKMIT 540
Query: 493 GDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEI 552
GD LAIAKETGRRLG+GTNMYPSS LLGR+KDE+E LPVDELIEKADGF VF EHKYEI
Sbjct: 541 GDQLAIAKETGRRLGMGTNMYPSSSLLGREKDESEVLPVDELIEKADGFAGVFPEHKYEI 600
Query: 553 VKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAV 612
V+ILQEKKHV GMTGDGVNDAPALKKADIGIAVA AT+AAR AADIVLTEPGLSVI SAV
Sbjct: 601 VRILQEKKHVCGMTGDGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLSVIISAV 660
Query: 613 LTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISK 672
LTSR +FQ MKN I+AVSITI IVL FVLLALIWEYDFPPFMVLIIA+LNDGTI+TISK
Sbjct: 661 LTSRAIFQRMKNYTIYAVSITIRIVLGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISK 720
Query: 673 GRVKSSLRPDGWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEE 732
RVK S +PD WKLNEIFA G+VIG YLALVT+LFYWV+ T FF+THFHV +L S TEE
Sbjct: 721 DRVKPSPKPDSWKLNEIFATGVVIGTYLALVTVLFYWVIDSTTFFQTHFHVSTLKS-TEE 779
Query: 733 ISSAVHLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVLAQLVATLIAVYAHISFAYI 792
ISSA++LQVSIISQALIFVTRSQSWSF+ERPGALLMCAFV+AQLVATLIAVYA ISFA I
Sbjct: 780 ISSAIYLQVSIISQALIFVTRSQSWSFMERPGALLMCAFVVAQLVATLIAVYAEISFASI 839
Query: 793 SGIGWGWAGVIWLYSLVFYILLDIIKFTVR-TLSREAWN 830
SGIGWGWAGVIW+YS++FY+ LDIIKFTVR LS EAWN
Sbjct: 840 SGIGWGWAGVIWIYSVIFYVPLDIIKFTVRYALSGEAWN 878
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|5669167|gb|AAD46188.1| plasma membrane proton ATPase [Nicotiana plumbaginifolia] | Back alignment and taxonomy information |
|---|
Score = 1325 bits (3428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 664/858 (77%), Positives = 733/858 (85%), Gaps = 28/858 (3%)
Query: 1 MPEDLEKPLLDPENCNCGGIDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEK 60
M EDLEKPLL PEN GIDL LPL+EVF QL T+++GLS+EDAE RLK FG NKLE+
Sbjct: 1 MAEDLEKPLLGPENLREEGIDLENLPLEEVFEQLITSKEGLSAEDAERRLKIFGPNKLEE 60
Query: 61 KPENKFLKFLSFMWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFI 120
K ENKFLKFL FMWNP SWVME AA+MAI LANGGGQGPDWQD VGIVCLL+INS+ISFI
Sbjct: 61 KRENKFLKFLRFMWNPCSWVMEAAAIMAIGLANGGGQGPDWQDFVGIVCLLLINSTISFI 120
Query: 121 EESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGD 180
EE+NA NA AALMA L P+TKVLRDG+W+E+DAA+LVPGDIISIK GD+IPADARLLEGD
Sbjct: 121 EENNAGNAAAALMARLAPRTKVLRDGRWQEKDAAILVPGDIISIKLGDIIPADARLLEGD 180
Query: 181 PLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTEV 229
PLK+DQS LTGESL +TK+TGDEVFSG TCKH V+SFFGKAA LVDSTE
Sbjct: 181 PLKVDQSALTGESLPITKKTGDEVFSGSTCKHGEIEAVVIATGVNSFFGKAAHLVDSTEA 240
Query: 230 VGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRIN----------------M 273
GHFQ+VL SIGNFCIC I VGMI EII+M+ +Q R YR IN +
Sbjct: 241 SGHFQKVLASIGNFCICSIAVGMIFEIIIMYAVQRRSYRTGINNLLVLLIGGIPIAMPTV 300
Query: 274 LSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRD 333
LSVTLAI S+RLSQ+GAITKRMTAIEEMA MDVLCS KT LTLNRLTVDRNLIEVF RD
Sbjct: 301 LSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFQRD 360
Query: 334 MDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYT 393
MDKD++VLLAARASRLENQDAIDAAIIN+LADPKEARANI +VHFLPFNPVDKRTAITY
Sbjct: 361 MDKDMVVLLAARASRLENQDAIDAAIINVLADPKEARANIRQVHFLPFNPVDKRTAITYI 420
Query: 394 DSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDS 453
DS+G WYRASKGAPEQIL++CQEK++I KVH II++ AE+GLRSLAVA QE+PE +++S
Sbjct: 421 DSDGKWYRASKGAPEQILDLCQEKQQISAKVHTIIDRFAERGLRSLAVAFQEIPENSKES 480
Query: 454 PGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY 513
PGGP +FCGLLPLFDPPRHDS++TI RAL LGVCVKMITGD LAIAKETGRRLG+GTNMY
Sbjct: 481 PGGPWAFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNMY 540
Query: 514 PSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDA 573
PS GRDKDENEALPVDELIEKADGF VF EHKYEIVKILQ H+VGMTGDGVNDA
Sbjct: 541 PSFSFFGRDKDENEALPVDELIEKADGFAGVFPEHKYEIVKILQANGHIVGMTGDGVNDA 600
Query: 574 PALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSIT 633
PALKKADIGIAVA AT+AAR A+D+VLTEPGLSVI SAVLTSR +FQ MKN I+AVSIT
Sbjct: 601 PALKKADIGIAVADATDAARSASDLVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSIT 660
Query: 634 IHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAAG 693
I IVL F+LLALIWEYDFPPFMVLIIA+LNDGTI+TISK RVK S PD WKLNEIFA G
Sbjct: 661 IRIVLGFMLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPGPDSWKLNEIFATG 720
Query: 694 IVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTR 753
IVIG YLALV++LFYW+ T FFETHFHV+S+S NTEEIS+A++LQVSIISQALIFVTR
Sbjct: 721 IVIGTYLALVSVLFYWLADSTLFFETHFHVKSISGNTEEISAAIYLQVSIISQALIFVTR 780
Query: 754 SQSWSFLERPGALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYIL 813
SQSWSF+ERPG LLM AFV+AQLVATLIAVYAHI FA ISGIGWGWAGVIWLYSL+FYI
Sbjct: 781 SQSWSFIERPGLLLMFAFVVAQLVATLIAVYAHIEFASISGIGWGWAGVIWLYSLIFYIP 840
Query: 814 LDIIKFTVRT-LSREAWN 830
LDIIKF VR L+ +AWN
Sbjct: 841 LDIIKFIVRYGLTGDAWN 858
|
Source: Nicotiana plumbaginifolia Species: Nicotiana plumbaginifolia Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356506116|ref|XP_003521833.1| PREDICTED: ATPase 10, plasma membrane-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1324 bits (3426), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 664/858 (77%), Positives = 743/858 (86%), Gaps = 28/858 (3%)
Query: 1 MPEDLEKPLLDPENCNCGGIDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEK 60
M E+L+KPLLDPEN N GIDL R+PL+EVF QL T+R+GLSS+DAE R++ FG NKLE+
Sbjct: 1 MAEELDKPLLDPENFNREGIDLERIPLEEVFEQLRTSRRGLSSDDAEARIEIFGPNKLEE 60
Query: 61 KPENKFLKFLSFMWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFI 120
K ENK LKFLSFMWNPLSWVME AALMAI LANGGG+GPDWQD +GI+CLL+INS+ISFI
Sbjct: 61 KKENKILKFLSFMWNPLSWVMEAAALMAIILANGGGEGPDWQDFIGIICLLVINSTISFI 120
Query: 121 EESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGD 180
EE+NA NA AALMA L PKTKVLRDGQW+EQDAA+LVPGDIISIK GD+IPADARLLEGD
Sbjct: 121 EENNAGNAAAALMARLAPKTKVLRDGQWQEQDAAILVPGDIISIKLGDIIPADARLLEGD 180
Query: 181 PLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTEV 229
PLKIDQS LTGESL VTK TG+EVFSG TCKH VHSFFGKAA LVDSTEV
Sbjct: 181 PLKIDQSALTGESLPVTKRTGNEVFSGSTCKHGEIEAVVIATGVHSFFGKAAYLVDSTEV 240
Query: 230 VGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRIN----------------M 273
VGHFQ+VLTSIGNFCIC I +GMI EII+MFP++HR YRD IN +
Sbjct: 241 VGHFQKVLTSIGNFCICSIAIGMIFEIIIMFPVEHRSYRDGINNLLVLLIGGIPIAMPTV 300
Query: 274 LSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRD 333
LSVTLAI S+RLSQ+GAITKRMTAIEEMA MDVLCS KT LTLNRLTVDRNLIEVFNR+
Sbjct: 301 LSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRN 360
Query: 334 MDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYT 393
MDKD +VLLAARA+RLENQDAID A++NMLADPKEARANI EVHFLPFNPVDKRTAITY
Sbjct: 361 MDKDTVVLLAARAARLENQDAIDTAVVNMLADPKEARANITEVHFLPFNPVDKRTAITYI 420
Query: 394 DSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDS 453
D +GN++RASKGAPEQIL++CQEK++I KVH II+K AE+GLRSLAVA QE+PE ++DS
Sbjct: 421 DFDGNFHRASKGAPEQILDLCQEKDQIAKKVHTIIDKFAERGLRSLAVAYQEIPEKSKDS 480
Query: 454 PGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY 513
PGGP +FCGLLPLFDPPRHDS++TI RAL LGVCVKMITGD LAIAKETGRRLG+GTNMY
Sbjct: 481 PGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNMY 540
Query: 514 PSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDA 573
PSS LLGR+K+E+EALP+DEL+E ADGF V+ EHKYEIVKILQEK+HVVGMTGDGVNDA
Sbjct: 541 PSSSLLGREKEEHEALPIDELVEMADGFAGVYPEHKYEIVKILQEKQHVVGMTGDGVNDA 600
Query: 574 PALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSIT 633
PALKKADIGIAV+ AT+AAR AAD+VLTEPGLSVI SAVLTSR +FQ MKN I+AVSIT
Sbjct: 601 PALKKADIGIAVSDATDAARSAADLVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 660
Query: 634 IHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAAG 693
I IVL F LLALIWEYDFPPFMVLIIA+LNDGTI+TISK RVK S PD WKL EIFA G
Sbjct: 661 IRIVLGFALLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLPEIFATG 720
Query: 694 IVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTR 753
IVIG YLALVT+LFYW +V T FFE+HFHV S+SS++E++SSAV+LQVSIISQALIFVTR
Sbjct: 721 IVIGTYLALVTVLFYWAIVETTFFESHFHVSSISSDSEKVSSAVYLQVSIISQALIFVTR 780
Query: 754 SQSWSFLERPGALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYIL 813
S+ WSFLERPG LLMCAFV+AQLVAT+IAVYA+ISF I GIGW WAGVIWLYS++FY+
Sbjct: 781 SRGWSFLERPGVLLMCAFVIAQLVATIIAVYAYISFGKIRGIGWRWAGVIWLYSIIFYVP 840
Query: 814 LDIIKFTVRT-LSREAWN 830
LDIIKFTVR LS EAW
Sbjct: 841 LDIIKFTVRYGLSGEAWK 858
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|84627379|gb|ABC59935.1| P-type ATPase [Petunia x hybrida] gi|115493785|gb|ABI98399.1| P-type ATPase [Petunia x hybrida] | Back alignment and taxonomy information |
|---|
Score = 1316 bits (3406), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 664/858 (77%), Positives = 737/858 (85%), Gaps = 28/858 (3%)
Query: 1 MPEDLEKPLLDPENCNCGGIDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEK 60
M EDLE+PLL P+N + GIDL +LPL++VF +L T+++GLS EDAE RL FG NKLE+
Sbjct: 1 MAEDLERPLLGPDNFSREGIDLEKLPLEQVFEELRTSKEGLSDEDAEERLNIFGPNKLEE 60
Query: 61 KPENKFLKFLSFMWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFI 120
K ENKF+KFL FMWNPLSWVME AA+MAIALANGGGQGPDWQD VGIVCLL+INS+ISFI
Sbjct: 61 KRENKFIKFLGFMWNPLSWVMEAAAIMAIALANGGGQGPDWQDFVGIVCLLLINSTISFI 120
Query: 121 EESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGD 180
EE+NA NA AALMA L P+TKVLRDG+W+E+DAA+LVPGDIISIK GD+IPADARLLEGD
Sbjct: 121 EENNAGNAAAALMARLAPRTKVLRDGRWQEKDAAILVPGDIISIKLGDIIPADARLLEGD 180
Query: 181 PLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTEV 229
PLK+DQS LTGESL VTK+TGDEVFSG TCKH VHSFFGKAA LVDST+V
Sbjct: 181 PLKVDQSALTGESLPVTKKTGDEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTQV 240
Query: 230 VGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRIN----------------M 273
GHFQ+VL SIGNFCIC I +GMILEIIVMFP+Q+R YR IN +
Sbjct: 241 TGHFQKVLASIGNFCICSIAMGMILEIIVMFPVQNRSYRTGINNLLVLLIGGIPIAMPTV 300
Query: 274 LSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRD 333
LSVTLAI S+RLSQ+GAITKRMTAIEEMA MDVLCS KT LTLNRLT+DRNLIEVF +D
Sbjct: 301 LSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTIDRNLIEVFQKD 360
Query: 334 MDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYT 393
MDKD++VLLAARASRLENQDAIDAA+INMLADPKEARANI EVHFLPFNPVDKRTAITY
Sbjct: 361 MDKDMVVLLAARASRLENQDAIDAAVINMLADPKEARANIREVHFLPFNPVDKRTAITYI 420
Query: 394 DSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDS 453
DS+G WYRASKGAPEQIL +CQEK++I KVH II+K AE+GLRSLAV+ QE+PE +++S
Sbjct: 421 DSDGKWYRASKGAPEQILTLCQEKQQIAAKVHTIIDKFAERGLRSLAVSFQEIPENSKES 480
Query: 454 PGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY 513
PGGP FCGLLPLFDPPRHDS++TI RAL LGVCVKMITGD LAIAKETGRRLG+GTNMY
Sbjct: 481 PGGPWQFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNMY 540
Query: 514 PSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDA 573
PS L GRDKDE EALPVDELIEKADGF VF EHKYEIVKILQ +HVVGMTGDGVNDA
Sbjct: 541 PSCSLFGRDKDETEALPVDELIEKADGFAGVFPEHKYEIVKILQMNEHVVGMTGDGVNDA 600
Query: 574 PALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSIT 633
PALKKADIGIAVA AT+AAR AAD+VLTEPGLSVI SAVLTSR +FQ MKN I+AVSIT
Sbjct: 601 PALKKADIGIAVADATDAARSAADLVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSIT 660
Query: 634 IHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAAG 693
I IVL F+LLALIW+YDFPPFMVLIIA+LNDGTI+TISK RVK S RPD WKLNEIFA G
Sbjct: 661 IRIVLGFMLLALIWKYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFATG 720
Query: 694 IVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTR 753
+V+G YLALVT+LFYW+ T FFE HFHV+SLS ++EE+SSAV+LQVSIISQALIFVTR
Sbjct: 721 VVLGTYLALVTVLFYWLADSTQFFEAHFHVKSLSGSSEEMSSAVYLQVSIISQALIFVTR 780
Query: 754 SQSWSFLERPGALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYIL 813
SQSWSF ERPGALLM AFV+AQLVATLIAVYAHISFA + GIGWGWAGVIWLYSL+FYI
Sbjct: 781 SQSWSFTERPGALLMFAFVVAQLVATLIAVYAHISFASVRGIGWGWAGVIWLYSLIFYIP 840
Query: 814 LDIIKFTV-RTLSREAWN 830
LDIIKF V L+ EAWN
Sbjct: 841 LDIIKFAVCYALTGEAWN 858
|
Source: Petunia x hybrida Species: Petunia x hybrida Genus: Petunia Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42562116|ref|NP_173169.2| H+-transporting ATPase [Arabidopsis thaliana] gi|12585313|sp|Q43128.2|PMA10_ARATH RecName: Full=ATPase 10, plasma membrane-type; AltName: Full=Proton pump 10 gi|13162530|gb|AAD50009.3|AC007651_4 H+-transporting ATPase AHA10 [Arabidopsis thaliana] gi|13096793|gb|AAB32310.2| plasma membrane H(+)-ATPase isoform AHA10 [Arabidopsis thaliana] gi|332191444|gb|AEE29565.1| H+-transporting ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1241 bits (3212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 629/858 (73%), Positives = 713/858 (83%), Gaps = 28/858 (3%)
Query: 1 MPEDLEKPLLDPENCNCGGIDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEK 60
M EDL+KPLLDP+ N GIDL LPL+EVF L T+ QGL S DAE RLK FG N+LE+
Sbjct: 1 MAEDLDKPLLDPDTFNRKGIDLGILPLEEVFEYLRTSPQGLLSGDAEERLKIFGPNRLEE 60
Query: 61 KPENKFLKFLSFMWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFI 120
K EN+F+KFL FMWNPLSWVME AALMAIALAN GPDW+D GIVCLL+IN++ISF
Sbjct: 61 KQENRFVKFLGFMWNPLSWVMEAAALMAIALANSQSLGPDWEDFTGIVCLLLINATISFF 120
Query: 121 EESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGD 180
EE+NA NA AALMA L KT+VLRDGQW+EQDA++LVPGDIISIK GD+IPADARLLEGD
Sbjct: 121 EENNAGNAAAALMARLALKTRVLRDGQWQEQDASILVPGDIISIKLGDIIPADARLLEGD 180
Query: 181 PLKIDQSELTGESLTVTKETGDEVFSGLTCKHVH-----------SFFGKAADLVDSTEV 229
PLKIDQS LTGESL VTK+ G++VFSG TCK +FFGK A LVDST+V
Sbjct: 181 PLKIDQSVLTGESLPVTKKKGEQVFSGSTCKQGEIEAVVIATGSTTFFGKTARLVDSTDV 240
Query: 230 VGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRIN----------------M 273
GHFQQVLTSIGNFCIC I VGM+LEII+MFP+QHR YR IN +
Sbjct: 241 TGHFQQVLTSIGNFCICSIAVGMVLEIIIMFPVQHRSYRIGINNLLVLLIGGIPIAMPTV 300
Query: 274 LSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRD 333
LSVTLAI S+RLSQ+GAITKRMTAIEEMA MDVLC KT LTLN LTVD+NLIEVF
Sbjct: 301 LSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNSLTVDKNLIEVFVDY 360
Query: 334 MDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYT 393
MDKD ++LLA RASRLENQDAIDAAI++MLADP+EARANI E+HFLPFNPVDKRTAITY
Sbjct: 361 MDKDTILLLAGRASRLENQDAIDAAIVSMLADPREARANIREIHFLPFNPVDKRTAITYI 420
Query: 394 DSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDS 453
DS+G WYRA+KGAPEQ+LN+CQ+K EI +V+ II++ AEKGLRSLAVA QE+PE + +S
Sbjct: 421 DSDGKWYRATKGAPEQVLNLCQQKNEIAQRVYAIIDRFAEKGLRSLAVAYQEIPEKSNNS 480
Query: 454 PGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY 513
PGGP FCGLLPLFDPPRHDS +TI RAL LGVCVKMITGD LAIAKETGRRLG+GTNMY
Sbjct: 481 PGGPWRFCGLLPLFDPPRHDSGETILRALSLGVCVKMITGDQLAIAKETGRRLGMGTNMY 540
Query: 514 PSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDA 573
PSS LLG + DE+EA+PVDELIE ADGF VF EHKYEIVKILQE KHVVGMTGDGVNDA
Sbjct: 541 PSSSLLGHNNDEHEAIPVDELIEMADGFAGVFPEHKYEIVKILQEMKHVVGMTGDGVNDA 600
Query: 574 PALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSIT 633
PALKKADIGIAVA AT+AAR +ADIVLT+PGLSVI SAVLTSR +FQ M+N ++AVSIT
Sbjct: 601 PALKKADIGIAVADATDAARSSADIVLTDPGLSVIISAVLTSRAIFQRMRNYTVYAVSIT 660
Query: 634 IHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAAG 693
I IVL F LLALIWEYDFPPFMVLIIA+LNDGTI+TISK RV+ S P+ WKLN+IFA G
Sbjct: 661 IRIVLGFTLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVRPSPTPESWKLNQIFATG 720
Query: 694 IVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTR 753
IVIG YLALVT+LFYW++V T FFE HFHV+S+++N+E++SSA++LQVSIISQALIFVTR
Sbjct: 721 IVIGTYLALVTVLFYWIIVSTTFFEKHFHVKSIANNSEQVSSAMYLQVSIISQALIFVTR 780
Query: 754 SQSWSFLERPGALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYIL 813
S+ WSF ERPG LL+ AF+LAQL ATLIAVYA+ISFA I+GIGW WAGVIWLYSL+FYI
Sbjct: 781 SRGWSFFERPGTLLIFAFILAQLAATLIAVYANISFAKITGIGWRWAGVIWLYSLIFYIP 840
Query: 814 LDIIKFTVR-TLSREAWN 830
LD+IKF LS EAWN
Sbjct: 841 LDVIKFVFHYALSGEAWN 858
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15217282|gb|AAK92626.1|AC079633_6 Putative plasma membrane proton ATPase [Oryza sativa Japonica Group] gi|108706544|gb|ABF94339.1| ATPase 10, plasma membrane-type, putative [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 1222 bits (3163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 627/854 (73%), Positives = 707/854 (82%), Gaps = 30/854 (3%)
Query: 7 KPLLDPENCNCGGIDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKPENKF 66
+PLL EN +DL LPL++VF QL T++ GLSS DA RLK FG+N+LE+K ENK
Sbjct: 6 EPLLGLENFFDEDVDLENLPLEDVFEQLNTSQSGLSSADAAERLKLFGANRLEEKRENKI 65
Query: 67 LKFLSFMWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAE 126
+KFLSFMWNPLSWVME AA+MA+ LANGG QG DW+D +GIVCLLIINS+ISFIEE+NA
Sbjct: 66 IKFLSFMWNPLSWVMEAAAVMALVLANGGSQGTDWEDFLGIVCLLIINSTISFIEENNAG 125
Query: 127 NATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQ 186
+A AALMA L KTKVLRD QW+E DA+ LVPGDIISI+ GD++PADARLLEGDPLKIDQ
Sbjct: 126 DAAAALMARLALKTKVLRDEQWQELDASTLVPGDIISIRLGDIVPADARLLEGDPLKIDQ 185
Query: 187 SELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTEVVGHFQQ 235
S LTGESL VTK TGD VF+G TCKH +HSFFGKAA LVDSTEVVGHFQ+
Sbjct: 186 SALTGESLPVTKRTGDIVFTGSTCKHGEIEAVVIATGIHSFFGKAAHLVDSTEVVGHFQK 245
Query: 236 VLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRIN----------------MLSVTLA 279
VLTSIGNFCIC I +G I+E+I+MFPIQHR YRD IN +LSVTLA
Sbjct: 246 VLTSIGNFCICSIAIGAIVEVIIMFPIQHRSYRDGINNVLVLLIGGIPIAMPTVLSVTLA 305
Query: 280 IASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDIL 339
I S+ LSQ+GAITKRMTAIEEMA MDVLC KT LTLN LTVD+NLIEVF+R+MD++++
Sbjct: 306 IGSHHLSQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNHLTVDKNLIEVFSREMDREMI 365
Query: 340 VLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTDSEGNW 399
+LLAARASR+ENQDAID AIINMLADPKEAR++I EVHFLPFNPVDKRTAITY DS+GNW
Sbjct: 366 ILLAARASRVENQDAIDMAIINMLADPKEARSSITEVHFLPFNPVDKRTAITYVDSDGNW 425
Query: 400 YRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRS 459
+R SKGAPEQIL++C K++I KV II++ AE+GLRSLAVA QEVPE ++ GGP
Sbjct: 426 FRVSKGAPEQILSLCYNKDDISEKVQLIIDRFAERGLRSLAVAYQEVPEKSKHGHGGPWV 485
Query: 460 FCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLL 519
FCGLLPLFDPPRHDS+DTI RAL LGVCVKMITGDHLAIAKETGRRLG+GTNMYPS+ L
Sbjct: 486 FCGLLPLFDPPRHDSADTIRRALDLGVCVKMITGDHLAIAKETGRRLGMGTNMYPSASLF 545
Query: 520 GRDKDEN-EALPVDELIEKADGFTDVFAEHKYEIVKILQEKK-HVVGMTGDGVNDAPALK 577
GR D A+PV+EL+EKADGF VF EHKYEIV+++Q HV GMTGDGVNDAPALK
Sbjct: 546 GRHGDGGGAAVPVEELVEKADGFAGVFPEHKYEIVRMIQGGGGHVCGMTGDGVNDAPALK 605
Query: 578 KADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIV 637
KADIGIAV+ AT+AARGAADIVLTEPGLSVI SAVLTSR +FQ MKN I+AVSITI IV
Sbjct: 606 KADIGIAVSDATDAARGAADIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIV 665
Query: 638 LSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAAGIVIG 697
+ FVLLA IWEYDFPPFMVLIIA+LNDGTI+TISK RVK S PD WKLNEIFAAG+VIG
Sbjct: 666 IGFVLLASIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLNEIFAAGVVIG 725
Query: 698 NYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTRSQSW 757
YLALVT+LFYW V T FFE+HF VRSL N++EISSA++LQVSIISQALIFVTRSQ
Sbjct: 726 TYLALVTVLFYWTVTRTTFFESHFKVRSLKQNSDEISSAMYLQVSIISQALIFVTRSQGL 785
Query: 758 SFLERPGALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYILLDII 817
SFLERPGALL+CAF+LAQLVATLIAVYA ISFA IS IGWGWAGVIWLYSLVFY LD+I
Sbjct: 786 SFLERPGALLICAFILAQLVATLIAVYATISFASISAIGWGWAGVIWLYSLVFYAPLDLI 845
Query: 818 KFTVR-TLSREAWN 830
K VR TLS EAWN
Sbjct: 846 KIAVRYTLSGEAWN 859
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|222624320|gb|EEE58452.1| hypothetical protein OsJ_09682 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 1222 bits (3161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 627/854 (73%), Positives = 707/854 (82%), Gaps = 30/854 (3%)
Query: 7 KPLLDPENCNCGGIDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKPENKF 66
+PLL EN +DL LPL++VF QL T++ GLSS DA RLK FG+N+LE+K ENK
Sbjct: 6 EPLLGLENFFDEDVDLENLPLEDVFEQLNTSQSGLSSADAAERLKLFGANRLEEKRENKI 65
Query: 67 LKFLSFMWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAE 126
+KFLSFMWNPLSWVME AA+MA+ LANGG QG DW+D +GIVCLLIINS+ISFIEE+NA
Sbjct: 66 IKFLSFMWNPLSWVMEAAAVMALVLANGGSQGTDWEDFLGIVCLLIINSTISFIEENNAG 125
Query: 127 NATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQ 186
+A AALMA L KTKVLRD QW+E DA+ LVPGDIISI+ GD++PADARLLEGDPLKIDQ
Sbjct: 126 DAAAALMARLALKTKVLRDEQWQELDASTLVPGDIISIRLGDIVPADARLLEGDPLKIDQ 185
Query: 187 SELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTEVVGHFQQ 235
S LTGESL VTK TGD VF+G TCKH +HSFFGKAA LVDSTEVVGHFQ+
Sbjct: 186 SALTGESLPVTKRTGDIVFTGSTCKHGEIEAVVIATGIHSFFGKAAHLVDSTEVVGHFQK 245
Query: 236 VLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRIN----------------MLSVTLA 279
VLTSIGNFCIC I +G I+E+I+MFPIQHR YRD IN +LSVTLA
Sbjct: 246 VLTSIGNFCICSIAIGAIVEVIIMFPIQHRSYRDGINNVLVLLIGGIPIAMPTVLSVTLA 305
Query: 280 IASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDIL 339
I S+ LSQ+GAITKRMTAIEEMA MDVLC KT LTLN LTVD+NLIEVF+R+MD++++
Sbjct: 306 IGSHHLSQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNHLTVDKNLIEVFSREMDREMI 365
Query: 340 VLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTDSEGNW 399
+LLAARASR+ENQDAID AIINMLADPKEAR++I EVHFLPFNPVDKRTAITY DS+GNW
Sbjct: 366 ILLAARASRVENQDAIDMAIINMLADPKEARSSITEVHFLPFNPVDKRTAITYVDSDGNW 425
Query: 400 YRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRS 459
+R SKGAPEQIL++C K++I KV II++ AE+GLRSLAVA QEVPE ++ GGP
Sbjct: 426 FRVSKGAPEQILSLCYNKDDISEKVQLIIDRFAERGLRSLAVAYQEVPEKSKHGHGGPWV 485
Query: 460 FCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLL 519
FCGLLPLFDPPRHDS+DTI RAL LGVCVKMITGDHLAIAKETGRRLG+GTNMYPS+ L
Sbjct: 486 FCGLLPLFDPPRHDSADTIRRALDLGVCVKMITGDHLAIAKETGRRLGMGTNMYPSASLF 545
Query: 520 GRDKDEN-EALPVDELIEKADGFTDVFAEHKYEIVKILQEKK-HVVGMTGDGVNDAPALK 577
GR D A+PV+EL+EKADGF VF EHKYEIV+++Q HV GMTGDGVNDAPALK
Sbjct: 546 GRHGDGGGAAVPVEELVEKADGFAGVFPEHKYEIVRMIQGGGGHVCGMTGDGVNDAPALK 605
Query: 578 KADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIV 637
KADIGIAV+ AT+AARGAADIVLTEPGLSVI SAVLTSR +FQ MKN I+AVSITI IV
Sbjct: 606 KADIGIAVSDATDAARGAADIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIV 665
Query: 638 LSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAAGIVIG 697
+ FVLLA IWEYDFPPFMVLIIA+LNDGTI+TISK RVK S PD WKLNEIFAAG+VIG
Sbjct: 666 IGFVLLASIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPSPDSWKLNEIFAAGVVIG 725
Query: 698 NYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTRSQSW 757
YLALVT+LFYW V T FFE+HF VRSL N++EISSA++LQVSIISQALIFVTRSQ
Sbjct: 726 TYLALVTVLFYWTVTRTTFFESHFKVRSLKQNSDEISSAMYLQVSIISQALIFVTRSQGL 785
Query: 758 SFLERPGALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYILLDII 817
SFLERPGALL+CAF+LAQLVATLIAVYA ISFA IS IGWGWAGVIWLYSLVFY LD+I
Sbjct: 786 SFLERPGALLICAFILAQLVATLIAVYATISFASISAIGWGWAGVIWLYSLVFYAPLDLI 845
Query: 818 KFTVR-TLSREAWN 830
K VR TLS EAWN
Sbjct: 846 KIAVRYTLSGEAWN 859
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 831 | ||||||
| TAIR|locus:2044450 | 949 | HA1 "H(+)-ATPase 1" [Arabidops | 0.670 | 0.586 | 0.692 | 4.7e-293 | |
| TAIR|locus:2096549 | 948 | HA8 "H(+)-ATPase 8" [Arabidops | 0.671 | 0.588 | 0.683 | 6e-293 | |
| TAIR|locus:2025727 | 954 | HA9 "H(+)-ATPase 9" [Arabidops | 0.671 | 0.584 | 0.682 | 3.3e-292 | |
| TAIR|locus:2165600 | 949 | HA3 "H(+)-ATPase 3" [Arabidops | 0.670 | 0.586 | 0.670 | 6.3e-289 | |
| TAIR|locus:2046623 | 949 | HA5 "H(+)-ATPase 5" [Arabidops | 0.671 | 0.587 | 0.676 | 2.7e-288 | |
| TAIR|locus:2020372 | 947 | AHA10 "autoinhibited H(+)-ATPa | 0.809 | 0.710 | 0.682 | 9.9e-245 | |
| TAIR|locus:2097895 | 960 | HA4 "H(+)-ATPase 4" [Arabidops | 0.809 | 0.701 | 0.648 | 6.8e-230 | |
| TAIR|locus:2172244 | 956 | HA11 "H(+)-ATPase 11" [Arabido | 0.809 | 0.703 | 0.644 | 5.5e-228 | |
| TAIR|locus:2053343 | 949 | HA6 "H(+)-ATPase 6" [Arabidops | 0.809 | 0.709 | 0.637 | 7.9e-227 | |
| TAIR|locus:2081932 | 961 | HA7 "H(+)-ATPase 7" [Arabidops | 0.807 | 0.698 | 0.586 | 4.7e-206 |
| TAIR|locus:2044450 HA1 "H(+)-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1956 (693.6 bits), Expect = 4.7e-293, Sum P(2) = 4.7e-293
Identities = 387/559 (69%), Positives = 451/559 (80%)
Query: 273 MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNR 332
+LSVT+AI S+RLSQ+GAITKRMTAIEEMA MDVLCS KT LTLN+L+VD+NL+EVF +
Sbjct: 292 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCK 351
Query: 333 DMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITY 392
++KD ++L AA ASR+ENQDAIDAA++ MLADPKEARA I EVHFLPFNPVDKRTA+TY
Sbjct: 352 GVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTY 411
Query: 393 TDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTED 452
DS+GNW+R SKGAPEQIL++ + ++ KV I+K AE+GLRSLAVA Q VPE T++
Sbjct: 412 IDSDGNWHRVSKGAPEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKE 471
Query: 453 SPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNM 512
SPGGP F GLLPLFDPPRHDS++TI RAL LGV VKMITGD LAI KETGRRLG+GTNM
Sbjct: 472 SPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM 531
Query: 513 YPSSLLLGRDKDENEA-LPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVN 571
YPS+ LLG DKD N A +PV+ELIEKADGF VF EHKYEIVK LQE+KH+VGMTGDGVN
Sbjct: 532 YPSAALLGTDKDSNIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVN 591
Query: 572 DAPALKKADXXXXXXXXXXXXXXXXXXVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVS 631
DAPALKKAD VLTEPGLSVI SAVLTSR +FQ MKN I+AVS
Sbjct: 592 DAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 651
Query: 632 ITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFA 691
ITI IV F+L+ALIWE+DF FMVLIIA+LNDGTI+TISK RVK S PD WKL EIFA
Sbjct: 652 ITIRIVFGFMLIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFA 711
Query: 692 AGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFV 751
GIV+G Y A+++++F+W TDFF F VRS+ N +E+ AV+LQVSIISQALIFV
Sbjct: 712 TGIVLGGYQAIMSVIFFWAAHKTDFFSDKFGVRSIRDNNDELMGAVYLQVSIISQALIFV 771
Query: 752 TRSQSWSFLERPGALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFY 811
TRS+SWSF+ERPGALLM AFV+AQLVATLIAVYA +FA + GIGWGWAGVIW+YS+V Y
Sbjct: 772 TRSRSWSFVERPGALLMIAFVIAQLVATLIAVYADWTFAKVKGIGWGWAGVIWIYSIVTY 831
Query: 812 ILLDIIKFTVR-TLSREAW 829
DI+KF +R LS +AW
Sbjct: 832 FPQDILKFAIRYILSGKAW 850
|
|
| TAIR|locus:2096549 HA8 "H(+)-ATPase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1944 (689.4 bits), Expect = 6.0e-293, Sum P(2) = 6.0e-293
Identities = 383/560 (68%), Positives = 450/560 (80%)
Query: 273 MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNR 332
+LSVT+AI S+RLSQ+GAITKRMTAIEEMA MDVLCS KT LTLN+L+VD++LIEVF +
Sbjct: 295 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPK 354
Query: 333 DMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITY 392
+MD D +VL+AARASR+ENQDAIDA+I+ ML DPKEARA I EVHFLPFNPVDKRTAITY
Sbjct: 355 NMDSDSVVLMAARASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITY 414
Query: 393 TDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTED 452
D G+W+R+SKGAPEQI+ +C + E K HE+I+ AE+GLRSL VA Q VPE T++
Sbjct: 415 IDESGDWHRSSKGAPEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKE 474
Query: 453 SPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNM 512
S G P F GLLPLFDPPRHDS++TI RAL+LGV VKMITGD LAI ETGRRLG+GTNM
Sbjct: 475 SDGSPWEFVGLLPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNM 534
Query: 513 YPSSLLLGRDKDEN-EALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVN 571
YPS+ LLG KDE+ +P+DELIEKADGF VF EHKYEIVK LQE+KH+ GMTGDGVN
Sbjct: 535 YPSTSLLGNSKDESLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVN 594
Query: 572 DAPALKKADXXXXXXXXXXXXXXXXXXVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVS 631
DAPALKKAD VLTEPGLSVI SAVLTSR +FQ MKN I+AVS
Sbjct: 595 DAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 654
Query: 632 ITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFA 691
ITI IVL F+L+ALIW +DF PFMVLIIA+LNDGTI+TISK RVK S PD WKLNEIFA
Sbjct: 655 ITIRIVLGFMLVALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFA 714
Query: 692 AGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFV 751
G+V+G Y+AL T+LF+W+ TDFF F VRS+ N EE+ +A++LQVSIISQALIFV
Sbjct: 715 TGVVLGTYMALTTVLFFWLAHDTDFFSKTFGVRSIQGNEEELMAALYLQVSIISQALIFV 774
Query: 752 TRSQSWSFLERPGALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFY 811
TRS+SWSF+ERPG LL+ AFV+AQLVATLIAVYA+ FA I G GWGWAG IW+YS++ Y
Sbjct: 775 TRSRSWSFVERPGFLLLIAFVIAQLVATLIAVYANWGFARIVGCGWGWAGGIWVYSIITY 834
Query: 812 ILLDIIKFTVR-TLSREAWN 830
I LDI+KF +R L+ +AW+
Sbjct: 835 IPLDILKFIIRYALTGKAWD 854
|
|
| TAIR|locus:2025727 HA9 "H(+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1957 (694.0 bits), Expect = 3.3e-292, Sum P(2) = 3.3e-292
Identities = 382/560 (68%), Positives = 453/560 (80%)
Query: 273 MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNR 332
+LSVT+AI S+RLSQ+GAITKRMTAIEEMA MDVLCS KT LTLN+LTVD++++EVF +
Sbjct: 297 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVK 356
Query: 333 DMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITY 392
D+DKD L++ AARASR+ENQDAIDA I+ ML DP+EAR I EVHF PFNPVDKRTAITY
Sbjct: 357 DLDKDQLLVNAARASRVENQDAIDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITY 416
Query: 393 TDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTED 452
D+ GNW+R SKGAPEQI+ +C +E+ + H+II+K A++GLRSLAV Q V E ++
Sbjct: 417 IDANGNWHRVSKGAPEQIIELCNLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKN 476
Query: 453 SPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNM 512
SPG P F GLLPLFDPPRHDS++TI RAL LGV VKMITGD LAI KETGRRLG+GTNM
Sbjct: 477 SPGEPWQFLGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNM 536
Query: 513 YPSSLLLGRDKDENEA-LPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVN 571
YPSS LLG+DKDE+ A LPVDELIEKADGF VF EHKYEIVK LQE KH+ GMTGDGVN
Sbjct: 537 YPSSALLGQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVN 596
Query: 572 DAPALKKADXXXXXXXXXXXXXXXXXXVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVS 631
DAPALK+AD VLTEPGLSVI SAVLTSR +FQ MKN I+AVS
Sbjct: 597 DAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVS 656
Query: 632 ITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFA 691
ITI IV+ F+LLALIW++DF PFMVLI+A+LNDGTI+TISK RVK S PD WKL EIFA
Sbjct: 657 ITIRIVMGFMLLALIWKFDFSPFMVLIVAILNDGTIMTISKDRVKPSPLPDSWKLKEIFA 716
Query: 692 AGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFV 751
G+V+G YLA++T++F+W TDFF F VRS+S N E+++AV+LQVSI+SQALIFV
Sbjct: 717 TGVVLGTYLAVMTVVFFWAAESTDFFSAKFGVRSISGNPHELTAAVYLQVSIVSQALIFV 776
Query: 752 TRSQSWSFLERPGALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFY 811
TRS+SWS++ERPG L+ AF +AQL+ATLIAVYA+ +FA I GIGWGWAGVIWLYS+VFY
Sbjct: 777 TRSRSWSYVERPGFWLISAFFMAQLIATLIAVYANWNFARIRGIGWGWAGVIWLYSIVFY 836
Query: 812 ILLDIIKFTVR-TLSREAWN 830
I LDI+KF +R +LS AW+
Sbjct: 837 IPLDILKFIIRYSLSGRAWD 856
|
|
| TAIR|locus:2165600 HA3 "H(+)-ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1923 (682.0 bits), Expect = 6.3e-289, Sum P(2) = 6.3e-289
Identities = 375/559 (67%), Positives = 448/559 (80%)
Query: 273 MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNR 332
+LSVT+AI S++LSQ+GAITKRMTAIEEMA MDVLCS KT LTLN+L+VD+NLIEV+ +
Sbjct: 293 VLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCK 352
Query: 333 DMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITY 392
++KD ++L AARASR+ENQDAIDAA++ MLADPKEARA I E+HFLPFNPVDKRTA+T+
Sbjct: 353 GVEKDEVLLFAARASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTF 412
Query: 393 TDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTED 452
DS GNW+R SKGAPEQIL++C + ++ +VH I+K AE+GLRSLAV+ Q VPE T++
Sbjct: 413 IDSNGNWHRVSKGAPEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKE 472
Query: 453 SPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNM 512
S G P F G+LPLFDPPRHDS++TI RAL LGV VKMITGD LAIAKETGRRLG+G+NM
Sbjct: 473 SSGSPWEFVGVLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNM 532
Query: 513 YPSSLLLGRDKDENEA-LPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVN 571
YPSS LLG+ KDE A +PV++LIEKADGF VF EHKYEIVK LQE+KH+ GMTGDGVN
Sbjct: 533 YPSSSLLGKHKDEAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVN 592
Query: 572 DAPALKKADXXXXXXXXXXXXXXXXXXVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVS 631
DAPALKKAD VLTEPGLSVI SAVLTSR +FQ MKN I+AVS
Sbjct: 593 DAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 652
Query: 632 ITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFA 691
ITI IV F+L+ALIW++DF PFMVLIIA+LNDGTI+TISK RVK S PD WKL EIFA
Sbjct: 653 ITIRIVFGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFA 712
Query: 692 AGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFV 751
G+V+G Y+A++T++F+W TDFF FHVR L + E+ SA++LQVSI+SQALIFV
Sbjct: 713 TGVVLGGYMAIMTVVFFWAAYKTDFFPRTFHVRDLRGSEHEMMSALYLQVSIVSQALIFV 772
Query: 752 TRSQSWSFLERPGALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFY 811
TRS+SWSF ERPG L+ AF +AQL+AT IAVY + FA I GIGWGWAGVIWLYS+VFY
Sbjct: 773 TRSRSWSFTERPGYFLLIAFWVAQLIATAIAVYGNWEFARIKGIGWGWAGVIWLYSIVFY 832
Query: 812 ILLDIIKFTVR-TLSREAW 829
LDI+KF +R L+ AW
Sbjct: 833 FPLDIMKFAIRYILAGTAW 851
|
|
| TAIR|locus:2046623 HA5 "H(+)-ATPase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1924 (682.3 bits), Expect = 2.7e-288, Sum P(2) = 2.7e-288
Identities = 379/560 (67%), Positives = 449/560 (80%)
Query: 272 NMLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFN 331
++LSVT+A S+RL Q+GAITKRMTAIEEMA MDVLC KT LTLN+LTVD+NL+EVF
Sbjct: 291 SVLSVTMATGSHRLFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFA 350
Query: 332 RDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAIT 391
+ + K+ + LLAARASR+ENQDAIDAAI+ MLADPKEARA + EVHF PFNPVDKRTA+T
Sbjct: 351 KGVGKEHVFLLAARASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALT 410
Query: 392 YTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTE 451
Y DS+GNW+RASKGAPEQILN+C KE++ KVH +I+K AE+GLRSLAVA QEV E +
Sbjct: 411 YVDSDGNWHRASKGAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKK 470
Query: 452 DSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTN 511
D+PGGP GLLPLFDPPRHDS++TI RAL LGV VKMITGD LAI KETGRRLG+GTN
Sbjct: 471 DAPGGPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTN 530
Query: 512 MYPSSLLLGRDKDEN-EALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGV 570
MYPSS LLG+ KD + ALPVDELIEKADGF VF EHKYEIV LQ++ H+ GMTGDGV
Sbjct: 531 MYPSSALLGQVKDSSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGV 590
Query: 571 NDAPALKKADXXXXXXXXXXXXXXXXXXVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAV 630
NDAPALKKAD VLTEPGLSVI SAVLTSR +FQ MKN I+AV
Sbjct: 591 NDAPALKKADIGIAVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 650
Query: 631 SITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIF 690
SITI IV F+ +ALIW++DF PFMVLIIA+LNDGTI+TISK R+K S +PD WKL +IF
Sbjct: 651 SITIRIVFGFMFIALIWQFDFSPFMVLIIAILNDGTIMTISKDRMKPSPQPDSWKLRDIF 710
Query: 691 AAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIF 750
+ G+V+G Y AL+T++F+WV+ +DFF +F VR LS E++ +A++LQVSIISQALIF
Sbjct: 711 STGVVLGGYQALMTVVFFWVMKDSDFFSNYFGVRPLSQRPEQMMAALYLQVSIISQALIF 770
Query: 751 VTRSQSWSFLERPGALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVF 810
VTRS+SWS+ E PG LL+ AFV+AQLVAT IAVYA+ SFA I G GWGWAGVIWLYS +
Sbjct: 771 VTRSRSWSYAECPGLLLLGAFVIAQLVATFIAVYANWSFARIEGAGWGWAGVIWLYSFLT 830
Query: 811 YILLDIIKFTVR-TLSREAW 829
YI LD++KF +R LS +AW
Sbjct: 831 YIPLDLLKFGIRYVLSGKAW 850
|
|
| TAIR|locus:2020372 AHA10 "autoinhibited H(+)-ATPase isoform 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2358 (835.1 bits), Expect = 9.9e-245, P = 9.9e-245
Identities = 472/692 (68%), Positives = 547/692 (79%)
Query: 156 LVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETGDEVFSGLTCKHVHS 215
++P D ++ GD + D +L G+ L + + + T + G E+ + + +
Sbjct: 169 IIPADARLLE-GDPLKIDQSVLTGESLPVTKKKGEQVFSGSTCKQG-EIEAVVIATGSTT 226
Query: 216 FFGKAADLVDSTEVVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRIN--- 272
FFGK A LVDST+V GHFQQVLTSIGNFCIC I VGM+LEII+MFP+QHR YR IN
Sbjct: 227 FFGKTARLVDSTDVTGHFQQVLTSIGNFCICSIAVGMVLEIIIMFPVQHRSYRIGINNLL 286
Query: 273 -------------MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNR 319
+LSVTLAI S+RLSQ+GAITKRMTAIEEMA MDVLC KT LTLN
Sbjct: 287 VLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNS 346
Query: 320 LTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFL 379
LTVD+NLIEVF MDKD ++LLA RASRLENQDAIDAAI++MLADP+EARANI E+HFL
Sbjct: 347 LTVDKNLIEVFVDYMDKDTILLLAGRASRLENQDAIDAAIVSMLADPREARANIREIHFL 406
Query: 380 PFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSL 439
PFNPVDKRTAITY DS+G WYRA+KGAPEQ+LN+CQ+K EI +V+ II++ AEKGLRSL
Sbjct: 407 PFNPVDKRTAITYIDSDGKWYRATKGAPEQVLNLCQQKNEIAQRVYAIIDRFAEKGLRSL 466
Query: 440 AVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIA 499
AVA QE+PE + +SPGGP FCGLLPLFDPPRHDS +TI RAL LGVCVKMITGD LAIA
Sbjct: 467 AVAYQEIPEKSNNSPGGPWRFCGLLPLFDPPRHDSGETILRALSLGVCVKMITGDQLAIA 526
Query: 500 KETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEK 559
KETGRRLG+GTNMYPSS LLG + DE+EA+PVDELIE ADGF VF EHKYEIVKILQE
Sbjct: 527 KETGRRLGMGTNMYPSSSLLGHNNDEHEAIPVDELIEMADGFAGVFPEHKYEIVKILQEM 586
Query: 560 KHVVGMTGDGVNDAPALKKADXXXXXXXXXXXXXXXXXXVLTEPGLSVICSAVLTSRTVF 619
KHVVGMTGDGVNDAPALKKAD VLT+PGLSVI SAVLTSR +F
Sbjct: 587 KHVVGMTGDGVNDAPALKKADIGIAVADATDAARSSADIVLTDPGLSVIISAVLTSRAIF 646
Query: 620 QIMKNCMIHAVSITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSL 679
Q M+N ++AVSITI IVL F LLALIWEYDFPPFMVLIIA+LNDGTI+TISK RV+ S
Sbjct: 647 QRMRNYTVYAVSITIRIVLGFTLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVRPSP 706
Query: 680 RPDGWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHL 739
P+ WKLN+IFA GIVIG YLALVT+LFYW++V T FFE HFHV+S+++N+E++SSA++L
Sbjct: 707 TPESWKLNQIFATGIVIGTYLALVTVLFYWIIVSTTFFEKHFHVKSIANNSEQVSSAMYL 766
Query: 740 QVSIISQALIFVTRSQSWSFLERPGALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGW 799
QVSIISQALIFVTRS+ WSF ERPG LL+ AF+LAQL ATLIAVYA+ISFA I+GIGW W
Sbjct: 767 QVSIISQALIFVTRSRGWSFFERPGTLLIFAFILAQLAATLIAVYANISFAKITGIGWRW 826
Query: 800 AGVIWLYSLVFYILLDIIKFTVR-TLSREAWN 830
AGVIWLYSL+FYI LD+IKF LS EAWN
Sbjct: 827 AGVIWLYSLIFYIPLDVIKFVFHYALSGEAWN 858
|
|
| TAIR|locus:2097895 HA4 "H(+)-ATPase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2218 (785.8 bits), Expect = 6.8e-230, P = 6.8e-230
Identities = 452/697 (64%), Positives = 534/697 (76%)
Query: 156 LVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETGDEVFSGLTCKHVHS 215
+VP D ++ GD + D L G+ L + +S G T + G E+ + + VH+
Sbjct: 169 IVPADARLLE-GDPLKIDQSALTGESLPVTKSSGDGVYSGSTCKQG-EIEAVVIATGVHT 226
Query: 216 FFGKAADLVDSTEVVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRIN--- 272
FFGKAA LVD+T +GHFQQVLT+IGNFCIC I VGM++EI+VM+PIQHR YR I+
Sbjct: 227 FFGKAAHLVDTTNQIGHFQQVLTAIGNFCICSIAVGMLIEIVVMYPIQHRAYRPGIDNLL 286
Query: 273 -------------MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNR 319
+LSVT+AI S+RLSQ+GAITKRMTAIEEMA MDVLCS KT LTLN+
Sbjct: 287 VLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNK 346
Query: 320 LTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFL 379
LTVD+NLIEVF + +D D +VL+AARASRLENQDAIDAAI+ MLADPK+ARA I EVHFL
Sbjct: 347 LTVDKNLIEVFMKGVDADTVVLMAARASRLENQDAIDAAIVGMLADPKDARAGIQEVHFL 406
Query: 380 PFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSL 439
PFNP DKRTA+TY D+EGN +R SKGAPEQILN+ K EI +VH +I+K AE+GLRSL
Sbjct: 407 PFNPTDKRTALTYIDNEGNTHRVSKGAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSL 466
Query: 440 AVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIA 499
AVA Q+VPE +DS GGP F GL+PLFDPPRHDS++TI RAL LGV VKMITGD LAI
Sbjct: 467 AVAYQDVPEGRKDSAGGPWQFVGLMPLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIG 526
Query: 500 KETGRRLGIGTNMYPSSLLLGRDKDEN-EALPVDELIEKADGFTDVFAEHKYEIVKILQE 558
KETGRRLG+GTNMYPSS LLG++KDE+ ALPVDELIEKADGF VF EHKYEIVK LQ
Sbjct: 527 KETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQA 586
Query: 559 KKHVVGMTGDGVNDAPALKKADXXXXXXXXXXXXXXXXXXVLTEPGLSVICSAVLTSRTV 618
+KH+ GMTGDGVNDAPALKKAD VLTEPGLSVI SAVLTSR +
Sbjct: 587 RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAI 646
Query: 619 FQIMKNCMIHAVSITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSS 678
FQ MKN I+AVSITI IVL F+LLALIW++DFPPFMVLIIA+LNDGTI+TISK RVK S
Sbjct: 647 FQRMKNYTIYAVSITIRIVLGFMLLALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPS 706
Query: 679 LRPDGWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEE----IS 734
PD WKL+EIFA G+V G+Y+A++T++F+WV TDFF F V +L + ++
Sbjct: 707 PLPDSWKLSEIFATGVVFGSYMAMMTVIFFWVSYKTDFFPRTFGVATLEKTAHDDFRKLA 766
Query: 735 SAVHLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVLAQLVATLIAVYAHISFAYISG 794
SA++LQVSIISQALIFVTRS+SWSF+ERPG LM AF+LAQLVATLIAVYA+ SFA I G
Sbjct: 767 SAIYLQVSIISQALIFVTRSRSWSFVERPGIFLMIAFILAQLVATLIAVYANWSFAAIEG 826
Query: 795 IGWGWAGVIWLYSLVFYILLDIIKFTVR-TLSREAWN 830
IGWGWAGVIWLY+++FYI LD IKF +R LS AW+
Sbjct: 827 IGWGWAGVIWLYNIIFYIPLDFIKFFIRYALSGRAWD 863
|
|
| TAIR|locus:2172244 HA11 "H(+)-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2200 (779.5 bits), Expect = 5.5e-228, P = 5.5e-228
Identities = 449/697 (64%), Positives = 533/697 (76%)
Query: 156 LVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETGDEVFSGLTCKHVHS 215
+VP D ++ GD + D L G+ L + + G T + G E+ + + VH+
Sbjct: 165 IVPADARLLE-GDPLKIDQSSLTGESLPVTKGPGDGVYSGSTCKQG-ELEAVVIATGVHT 222
Query: 216 FFGKAADLVDSTEVVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRIN--- 272
FFGKAA LVD+T VGHFQQVLT+IGNFCIC I VGMI+EI+VM+PIQHR YR I+
Sbjct: 223 FFGKAAHLVDTTNHVGHFQQVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLL 282
Query: 273 -------------MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNR 319
+LSVT+AI S+RLSQ+GAITKRMTAIEEMA MDVLCS KT LTLN+
Sbjct: 283 VLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNK 342
Query: 320 LTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFL 379
LTVD+NLIEVF + +D D +VL+AA+ASRLENQDAIDAAI+ MLADPKEARA + EVHFL
Sbjct: 343 LTVDKNLIEVFTKGVDADTVVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFL 402
Query: 380 PFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSL 439
PFNP DKRTA+TY DS+G +R SKGAPEQILN+ + EI +VH +I+K AE+GLRSL
Sbjct: 403 PFNPTDKRTALTYIDSDGKMHRVSKGAPEQILNLAHNRAEIERRVHAVIDKFAERGLRSL 462
Query: 440 AVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIA 499
AVA QEVPE T++S GGP F GL+PLFDPPRHDS++TI RAL LGV VKMITGD LAI
Sbjct: 463 AVAYQEVPEGTKESAGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIG 522
Query: 500 KETGRRLGIGTNMYPSSLLLGRDKDEN-EALPVDELIEKADGFTDVFAEHKYEIVKILQE 558
KETGRRLG+GTNMYPSS LLG+ KDE+ ALP+D+LIEKADGF VF EHKYEIVK LQ
Sbjct: 523 KETGRRLGMGTNMYPSSALLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQA 582
Query: 559 KKHVVGMTGDGVNDAPALKKADXXXXXXXXXXXXXXXXXXVLTEPGLSVICSAVLTSRTV 618
+KH+ GMTGDGVNDAPALKKAD VLTEPGLSVI SAVLTSR +
Sbjct: 583 RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAI 642
Query: 619 FQIMKNCMIHAVSITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSS 678
FQ MKN I+AVSITI IVL F+LLALIW++DFPPFMVLIIA+LNDGTI+TISK RVK S
Sbjct: 643 FQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPS 702
Query: 679 LRPDGWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEE----IS 734
PD WKL+EIFA G+V G+Y+A++T++F+W TDFF F V +L + ++
Sbjct: 703 PLPDSWKLSEIFATGVVFGSYMAMMTVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLA 762
Query: 735 SAVHLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVLAQLVATLIAVYAHISFAYISG 794
SA++LQVSIISQALIFVTRS+SWS++ERPG LL+ AF+LAQLVATLIAVYA+ SFA I G
Sbjct: 763 SAIYLQVSIISQALIFVTRSRSWSYVERPGMLLVVAFILAQLVATLIAVYANWSFAAIEG 822
Query: 795 IGWGWAGVIWLYSLVFYILLDIIKFTVR-TLSREAWN 830
IGWGWAGVIWLY++VFYI LDIIKF +R LS AW+
Sbjct: 823 IGWGWAGVIWLYNIVFYIPLDIIKFLIRYALSGRAWD 859
|
|
| TAIR|locus:2053343 HA6 "H(+)-ATPase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2171 (769.3 bits), Expect = 7.9e-227, Sum P(2) = 7.9e-227
Identities = 441/692 (63%), Positives = 520/692 (75%)
Query: 156 LVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETGDEVFSGLTCKHVHS 215
+VP D ++ GD + D L G+ L + + T + G E+ + + VH+
Sbjct: 164 IVPADARLLE-GDPLKIDQSALTGESLPATKHQGDEVFSGSTCKQG-EIEAVVIATGVHT 221
Query: 216 FFGKAADLVDSTEVVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRIN--- 272
FFGKAA LVDST VGHFQ+VLT+IGNFCIC I +GM++EII+M+PIQHR YRD I+
Sbjct: 222 FFGKAAHLVDSTNNVGHFQKVLTAIGNFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLL 281
Query: 273 -------------MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNR 319
+LSVT+AI S+RLSQ+GAITKRMTAIEEMA MDVLCS KT LTLN+
Sbjct: 282 VLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNK 341
Query: 320 LTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFL 379
LTVD+NLIEVF++D+DKD ++LL+ARASR+ENQDAID +I+NML DPKEARA I EVHFL
Sbjct: 342 LTVDKNLIEVFSKDVDKDYVILLSARASRVENQDAIDTSIVNMLGDPKEARAGITEVHFL 401
Query: 380 PFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSL 439
PFNPV+KRTAITY D+ G W+R SKGAPEQI+ +C K E + HEII+K AE+GLRSL
Sbjct: 402 PFNPVEKRTAITYIDTNGEWHRCSKGAPEQIIELCDLKGETKRRAHEIIDKFAERGLRSL 461
Query: 440 AVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIA 499
VA Q VPE ++S G P F GLLPLFDPPRHDS++TI RAL LGV VKMITGD LAI
Sbjct: 462 GVARQRVPEKDKESAGTPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIG 521
Query: 500 KETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEK 559
KETGRRLG+GTNMYPSS LL D +PVDELIEKADGF VF EHKYEIV+ LQE+
Sbjct: 522 KETGRRLGMGTNMYPSSSLLENKDDTTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQER 581
Query: 560 KHVVGMTGDGVNDAPALKKADXXXXXXXXXXXXXXXXXXVLTEPGLSVICSAVLTSRTVF 619
KH+VGMTGDGVNDAPALKKAD VLTEPGLSVI SAVLTSR +F
Sbjct: 582 KHIVGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIF 641
Query: 620 QIMKNCMIHAVSITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSL 679
Q MKN I+AVSITI IVL F+L+ALIWE+DF PFMVLIIA+LNDGTI+TISK RVK S
Sbjct: 642 QRMKNYTIYAVSITIRIVLGFMLVALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSP 701
Query: 680 RPDGWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHL 739
PD WKL EIFA G+V+G Y+ALVT++F+W+ T FF F VRSL EE+ + ++L
Sbjct: 702 IPDSWKLKEIFATGVVLGTYMALVTVVFFWLAHDTTFFSDKFGVRSLQGKDEELIAVLYL 761
Query: 740 QVSIISQALIFVTRSQSWSFLERPGALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGW 799
QVSIISQALIFVTRS+SWSF+ERPG LL+ AF +AQL+ATLIA YAH FA I G GWGW
Sbjct: 762 QVSIISQALIFVTRSRSWSFVERPGLLLLIAFFVAQLIATLIATYAHWEFARIKGCGWGW 821
Query: 800 AGVIWLYSLVFYILLDIIKFTVR-TLSREAWN 830
GVIW+YS+V YI LDI+KF R TLS +AWN
Sbjct: 822 CGVIWIYSIVTYIPLDILKFITRYTLSGKAWN 853
|
|
| TAIR|locus:2081932 HA7 "H(+)-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1993 (706.6 bits), Expect = 4.7e-206, P = 4.7e-206
Identities = 415/707 (58%), Positives = 513/707 (72%)
Query: 156 LVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETGDEVFSGLTCKHVHS 215
++P D ++ GD + D L G+ L + ++ T + G E+ + + VH+
Sbjct: 164 IIPADARLLE-GDPLKIDQATLTGESLPVTKNPGASVYSGSTCKQG-EIEAVVIATGVHT 221
Query: 216 FFGKAADLVDSTEVVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYR---DRI- 271
FFGKAA LVDST VGHFQ+VLT+IGNFCIC I VGM +EI+V++ +Q R YR D +
Sbjct: 222 FFGKAAHLVDSTTHVGHFQKVLTAIGNFCICSIAVGMAIEIVVIYGLQKRGYRVGIDNLL 281
Query: 272 ------------NMLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNR 319
+LSVT+AI ++RL+Q+GAITKRMTAIEEMA MDVLCS KT LTLN+
Sbjct: 282 VLLIGGIPIAMPTVLSVTMAIGAHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNK 341
Query: 320 LTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFL 379
L+VD+NLIEVF R +D+D+ VL+AARA+RLENQDAID AI++ML+DPKEARA I E+HFL
Sbjct: 342 LSVDKNLIEVFKRGIDRDMAVLMAARAARLENQDAIDTAIVSMLSDPKEARAGIKELHFL 401
Query: 380 PFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSL 439
PF+P ++RTA+TY D EG +R SKGAPE+IL+M K EI KVH I+K AE+GLRSL
Sbjct: 402 PFSPANRRTALTYLDGEGKMHRVSKGAPEEILDMAHNKLEIKEKVHATIDKFAERGLRSL 461
Query: 440 AVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIA 499
+A QEVP+ GGP F LLPLFDPPRHDS+ TI RAL LGV VKMITGD LAIA
Sbjct: 462 GLAYQEVPDGDVKGEGGPWDFVALLPLFDPPRHDSAQTIERALHLGVSVKMITGDQLAIA 521
Query: 500 KETGRRLGIGTNMYPSSLLLGRDKDEN-EALPVDELIEKADGFTDVFAEHKYEIVKILQE 558
KETGRRLG+GTNMYPSS LL D N E + VDELIE ADGF VF EHKYEIVK LQ
Sbjct: 522 KETGRRLGMGTNMYPSSSLLS---DNNTEGVSVDELIENADGFAGVFPEHKYEIVKRLQS 578
Query: 559 KKHVVGMTGDGVNDAPALKKADXXXXXXXXXXXXXXXXXXVLTEPGLSVICSAVLTSRTV 618
+KH+ GMTGDGVNDAPALKKAD VLTEPGLSVI SAVLTSR +
Sbjct: 579 RKHICGMTGDGVNDAPALKKADIGIAVDDATDAARGASDIVLTEPGLSVIISAVLTSRAI 638
Query: 619 FQIMKNCMIHAVSITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSS 678
FQ MKN I+AVSITI IV+ F+LL + WE+DFPPFMVL+IA+LNDGTI+TISK RVK S
Sbjct: 639 FQRMKNYTIYAVSITIRIVMGFMLLCVFWEFDFPPFMVLVIAILNDGTIMTISKDRVKPS 698
Query: 679 LRPDGWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSN--------- 729
PD WKL EIFA G+V+G YLA++T++F+W T+FF FHVR+ + +
Sbjct: 699 PTPDCWKLKEIFATGVVLGAYLAIMTVVFFWAAYETNFFHNIFHVRNFNQHHFKMKDKKV 758
Query: 730 ----TEEISSAVHLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVLAQLVATLIAVYA 785
E+++SAV+LQVS ISQALIFVTRS+SWSF+ERPG LL+ AF++AQLVA++I+ A
Sbjct: 759 AAHLNEQMASAVYLQVSTISQALIFVTRSRSWSFVERPGFLLVIAFLIAQLVASVISAMA 818
Query: 786 HISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVR-TLSREAWNQ 831
+ FA I IGWGW GVIW++++V Y+LLD IKF VR LS ++W++
Sbjct: 819 NWPFAGIRSIGWGWTGVIWIFNIVTYMLLDPIKFLVRYALSGKSWDR 865
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P49380 | PMA1_KLULA | 3, ., 6, ., 3, ., 6 | 0.3397 | 0.8664 | 0.8008 | yes | no |
| Q03194 | PMA4_NICPL | 3, ., 6, ., 3, ., 6 | 0.7003 | 0.9771 | 0.8529 | N/A | no |
| Q58623 | Y1226_METJA | 3, ., 6, ., 3, ., - | 0.3759 | 0.8916 | 0.9204 | yes | no |
| Q43128 | PMA10_ARATH | 3, ., 6, ., 3, ., 6 | 0.7331 | 0.9987 | 0.8764 | yes | no |
| Q08435 | PMA1_NICPL | 3, ., 6, ., 3, ., 6 | 0.6978 | 0.9759 | 0.8474 | N/A | no |
| Q08436 | PMA3_NICPL | 3, ., 6, ., 3, ., 6 | 0.6931 | 0.9759 | 0.8483 | N/A | no |
| P83970 | PMA1_WHEAT | 3, ., 6, ., 3, ., 6 | 0.6969 | 0.9855 | 0.8611 | N/A | no |
| P09627 | PMA1_SCHPO | 3, ., 6, ., 3, ., 6 | 0.3345 | 0.8965 | 0.8106 | yes | no |
| P22180 | PMA1_SOLLC | 3, ., 6, ., 3, ., 6 | 0.6907 | 0.9759 | 0.8483 | N/A | no |
| Q7XPY2 | PMA1_ORYSJ | 3, ., 6, ., 3, ., 6 | 0.7063 | 0.9855 | 0.8611 | no | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_fgenesh4_pg.C_290018 | autoinhibited H+ ATPase (950 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| grail3.0023015401 | SubName- Full=Putative uncharacterized protein; (216 aa) | • | 0.899 | ||||||||
| fgenesh4_pm.C_LG_II000842 | inorganic pyrophosphatase (EC-3.6.1.1) (215 aa) | • | 0.899 | ||||||||
| fgenesh4_pg.C_LG_VII001101 | SubName- Full=Putative uncharacterized protein; (213 aa) | • | 0.899 | ||||||||
| eugene3.00090843 | inorganic pyrophosphatase (EC-3.6.1.1) (298 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pm.C_LG_XIV0223 | SubName- Full=Putative uncharacterized protein; (216 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pg.C_LG_XIII0040 | vacuolar H+-translocating inorganic pyrophosphatase (EC-3.6.1.1) (757 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pg.C_1520062 | SubName- Full=Putative uncharacterized protein; (768 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pg.C_1330100 | vacuolar H+-translocating inorganic pyrophosphatase (EC-3.6.1.1) (757 aa) | • | 0.899 | ||||||||
| estExt_Genewise1_v1.C_LG_X3050 | vacuolar H+-translocating inorganic pyrophosphatase (636 aa) | • | 0.899 | ||||||||
| estExt_Genewise1_v1.C_LG_I4261 | SubName- Full=Putative uncharacterized protein; (296 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 831 | |||
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-150 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 5e-90 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-74 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 2e-65 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 6e-62 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 6e-58 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 2e-57 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 5e-50 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 8e-49 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 2e-46 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 5e-44 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 2e-36 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 3e-36 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 6e-26 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 7e-25 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 8e-22 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 1e-21 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 2e-21 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 1e-19 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 1e-19 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 3e-18 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 1e-16 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 7e-16 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 1e-15 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 1e-14 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 4e-12 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 7e-12 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 8e-11 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 1e-08 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 3e-08 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 4e-06 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 5e-06 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 9e-06 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 1e-05 | |
| PRK01158 | 230 | PRK01158, PRK01158, phosphoglycolate phosphatase; | 6e-04 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 0.001 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 0.004 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 982 bits (2542), Expect = 0.0
Identities = 393/774 (50%), Positives = 519/774 (67%), Gaps = 49/774 (6%)
Query: 40 GLSSEDAEVRLKFFGSNKLEKKPENKFLKFLSFMWNPLSWVMETAALMAIALANGGGQGP 99
GL+S +A+ RL +G N+L +K + LKFL F WNPLSWVME AA++AIAL N
Sbjct: 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALEN------ 54
Query: 100 DWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPG 159
W D V I+ LL++N++I FIEE+ A NA AL L PK +VLRDG+W+E A+ LVPG
Sbjct: 55 -WVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPG 113
Query: 160 DIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETGDEVFSGLTCKH------- 212
D++ +K GD++PAD RL EGD +++DQ+ LTGESL VTK+TGD +SG T K
Sbjct: 114 DVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVV 173
Query: 213 ----VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLY 267
+++FFGKAA LV STE GH Q++L+ IG F I I V +++E++V+F + +
Sbjct: 174 TATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233
Query: 268 RDRIN----------------MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVK 311
R+ + +LSVT+A+ + L+++ AI R+TAIEE+A MD+LCS K
Sbjct: 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDK 293
Query: 312 TAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARA 371
T LTLN+L++D L FN DKD ++L AA ASR E+QDAID A++ D KEAR
Sbjct: 294 TGTLTLNKLSIDEILP-FFNGF-DKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARD 351
Query: 372 NINEVHFLPFNPVDKRTAITYTDSE-GNWYRASKGAPEQILNMCQEKEEIGGKVHEIINK 430
+ F+PF+PVDKRT T D E G ++ +KGAP+ IL++C K+EI KV E +++
Sbjct: 352 GYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDE 411
Query: 431 LAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKM 490
LA +G R+L VA G F GLLPLFDPPRHD+ +TI RA LGV VKM
Sbjct: 412 LASRGYRALGVART--------DEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463
Query: 491 ITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKY 550
+TGDHLAIAKET RRLG+GTN+Y + +LL D ++ + E++E ADGF +VF EHKY
Sbjct: 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGLGEMVEDADGFAEVFPEHKY 523
Query: 551 EIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICS 610
EIV+ILQ++ H+VGMTGDGVNDAPALKKAD+GIAVAGAT+AAR AADIVLTEPGLSVI
Sbjct: 524 EIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVD 583
Query: 611 AVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITI 670
A+L SR +FQ MK+ +I+ ++ TI IV F LL LI + FPP MV+IIA+LNDGTI+TI
Sbjct: 584 AILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVIIAILNDGTIMTI 643
Query: 671 SKGRVKSSLRPDGWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNT 730
+ VK S P W L E+F V+G YL + T L + + T FF F ++ L
Sbjct: 644 AYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTTFFIDKFGLQLL---H 700
Query: 731 EEISSAVHLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVLAQLVATLIAVY 784
+ S ++LQVSI A IFVTR+ + + ERPG LL AFV+AQ++AT IAVY
Sbjct: 701 GNLQSFIYLQVSISGHATIFVTRTHGFFWSERPGKLLFGAFVIAQIIATFIAVY 754
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 464 bits (1196), Expect = e-150
Identities = 244/901 (27%), Positives = 404/901 (44%), Gaps = 118/901 (13%)
Query: 27 LDEVFGQLGTTRQ-GLSSEDAEVRLKFFGSNKL-EKKPENKFLKFLSFMWNPLSWVMETA 84
+E+ +L T+ GLS E+ + RLK +G N+L E+K + KFL +P ++ A
Sbjct: 30 RNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVA 89
Query: 85 ALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLR 144
AL++ + G D++ I+ +++IN+ + F++E AE A AL +PK KVLR
Sbjct: 90 ALLSAFV---GDWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLR 146
Query: 145 DGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTK----ET 200
DG++ E A+ LVPGDI+ ++ GDV+PAD RLLE L++D+S LTGESL V K T
Sbjct: 147 DGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQALPLT 206
Query: 201 GDEVFSGLTCKHV---------------------HSFFGKAADLVDST-EVVGHFQQVLT 238
+ GL ++ + FGK A L+ + EV Q+ L
Sbjct: 207 KSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLN 266
Query: 239 SIGNFCICFITVGMILEIIVMFPIQHRLYRDRIN----------------------MLSV 276
+ F+ V ++ ++F + L+R ++++
Sbjct: 267 KL----GKFLLVLALVLGALVFVVG--LFRGGNGLLESFLTALALAVAAVPEGLPAVVTI 320
Query: 277 TLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTV--------DRNLIE 328
LA+ + R+++ AI + + AIE + +DV+CS KT LT N++TV +++ +
Sbjct: 321 ALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDD 380
Query: 329 VFNRDMDKDILVLLAA---------RASRLENQDAIDAAII------NMLADPKEARANI 373
+D + LLAA + + D + A++ D
Sbjct: 381 KDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEY 440
Query: 374 NEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGG-------KVHE 426
+ +PF+ KR ++ EG + KGAPE IL C+ E+ + E
Sbjct: 441 PILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEE 500
Query: 427 IINKLAEKGLRSLAVAVQEVPEMTEDSPGGP----RSFCGLLPLFDPPRHDSSDTIHRAL 482
+ +LA +GLR LAVA +++ +D F GL + DPPR D + I
Sbjct: 501 AVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELR 560
Query: 483 KLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRD---KDENEALPVDELIEKAD 539
+ G+ V MITGDH+ A + GI + ++ G + + E + EL+E+
Sbjct: 561 EAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEE---LAELVEELS 617
Query: 540 GFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAG-ATEAARGAADI 598
F V E K IV+ LQ+ HVV MTGDGVNDAPALK AD+GIA+ G T+AA+ AADI
Sbjct: 618 VFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADI 677
Query: 599 VLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWEYDFP--PFMV 656
VL + + I AV+ R V+ +K +++ +S + VL+ ++ +L + P P +
Sbjct: 678 VLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQL 737
Query: 657 LIIAVLNDGTI---ITISKGR----VKSSLRPDGWKLN-EIFAAGIVIGNYLALVTILFY 708
L I +L D + + + P+ N +IF I+I L+ + +
Sbjct: 738 LWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILT 797
Query: 709 WVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTRSQS---WSFLERPGA 765
+++ + L + + + +I L RS+ S L
Sbjct: 798 FLLYL---LGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNK 854
Query: 766 LLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVRTLS 825
L A ++ ++ LI + WL ++ +LL I +
Sbjct: 855 YLWLALLVIIILQLLIIFLPP--LNLKIFQPTPLSLFEWLIAIAVALLLLYIVVSELYKL 912
Query: 826 R 826
+
Sbjct: 913 K 913
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 294 bits (754), Expect = 5e-90
Identities = 175/588 (29%), Positives = 268/588 (45%), Gaps = 106/588 (18%)
Query: 107 IVCLLIINSSISFIEESNAENATAALMAHLTPKTK--VLRDGQWKEQDAAVLVPGDIISI 164
I+ L+++ + ++ AE+ +L L VLR+G WKE A LVPGD++ +
Sbjct: 2 ILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNG-WKEIPAKDLVPGDVVLV 60
Query: 165 KFGDVIPADARLLEGDPLKIDQSELTGESLTVTKE----------TGDEVFSG------- 207
K G+ +PAD LL G +D+S LTGES V K TGD VF+G
Sbjct: 61 KSGETVPADGVLLSGS-CFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGGT 119
Query: 208 ----LTCKHVHSFFGKAADLVDST-EVVGHFQQVLTSIGNFCICFITVGMILEIIVMFPI 262
+T + + G+ A +V + E Q + NF FI ++L + V +
Sbjct: 120 LIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFI--FILFLLLLALAVFLYL 177
Query: 263 QHRLYRDR------------------INM---LSVTLAIASYRLSQRGAITKRMTAIEEM 301
R + + ++V LA+ RL+++G + + + A+EE+
Sbjct: 178 FIRGWDPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEEL 237
Query: 302 ARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIIN 361
++D LCS KT LT N++T+ + + D ++ D ++ A++
Sbjct: 238 GKVDYLCSDKTGTLTKNKMTLQG--VYIDGGKEDNSSSLVACDNNYLSG--DPMEKALLK 293
Query: 362 MLADPKEARANINE---VHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKE 418
+A E + PF+ V KR ++ +G+ KGAPE IL C
Sbjct: 294 SAELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCN--- 350
Query: 419 EIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTI 478
E +LA +GLR LA A +E+ + E F GL+ DP R D+ +TI
Sbjct: 351 ----NYEEKYLELARQGLRVLAFASKELEDDLE--------FLGLITFEDPLRPDAKETI 398
Query: 479 HRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKA 538
G+ V MITGD++ AK + LGI
Sbjct: 399 EELKAAGIKVVMITGDNVLTAKAIAKELGI------------------------------ 428
Query: 539 DGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADI 598
D F V E K +IV+ LQ+K H+V MTGDGVNDAPALKKAD+GIA+ A+ AADI
Sbjct: 429 DVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAM-----GAKAAADI 483
Query: 599 VLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALI 646
VL + LS I AV R +F +K+ + A++ + ++ +LL +I
Sbjct: 484 VLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIVI 531
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 260 bits (667), Expect = 1e-74
Identities = 205/740 (27%), Positives = 346/740 (46%), Gaps = 121/740 (16%)
Query: 25 LPLDEVFGQLGTTRQ-GL-SSEDAEVRLKFFGSNKLE-KKPENKFLKFLS-FMWNPLSWV 80
L ++E +L T Q GL SS++A R F G N+ + ++ E+ + KFLS F+ NPL +
Sbjct: 7 LSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILL 66
Query: 81 METAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKT 140
+ +A++++ + N D+V I ++I ++ F++E +E + AL + P+
Sbjct: 67 LIASAVISVFMGN-------IDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPEC 119
Query: 141 KVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKET 200
++R+G+ + A+ LVPGD++ + GD +PAD R++E L ID+S LTGE+ V+K T
Sbjct: 120 HLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKVT 179
Query: 201 --------------GDEVFSGLTCKH-----------VHSFFGKAADLVDSTEVVGH-FQ 234
+ F G + ++ FG ++ + E Q
Sbjct: 180 APIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQ 239
Query: 235 QVLTSIGN--FCICFITVGMIL--------EIIVMFPIQHRLYRDRIN-----MLSVTLA 279
+ + +G + F +G+I + + MF I L I +++VTLA
Sbjct: 240 KSMDLLGKQLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLA 299
Query: 280 IASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDR--------NLIEVFN 331
+ R+S++ AI +++ ++E + ++V+CS KT LT N +TV + ++ +
Sbjct: 300 LGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVS 359
Query: 332 RDMDKDILV----------------LLAA---RASRLENQDAI------DAAIINMLA-- 364
+ +++V L A ++ N+ D A+I +L
Sbjct: 360 LNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKF 419
Query: 365 ---DPKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRAS-KGAPEQILNMCQEKEEI 420
D +E + EV PF+ K A+ + KGA EQ+L C ++
Sbjct: 420 GLDDLRETYIRVAEV---PFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKK 476
Query: 421 GGKVH-----------EIINKLAEKGLRSLAVA-VQEVPEMTEDSPGGPRSFCGLLPLFD 468
GK E ++A GLR +A A E ++T F GL+ + D
Sbjct: 477 DGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEKGQLT---------FLGLVGIND 527
Query: 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEA 528
PPR + + + GV + MITGD A RRLG+ S + G D +
Sbjct: 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMP--SKTSQSVSGEKLDAMDD 585
Query: 529 LPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-G 587
+ +++ K F EHK +IVK LQ++ VV MTGDGVNDAPALK ADIG+A+
Sbjct: 586 QQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQT 645
Query: 588 ATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIW 647
T+ A+ AAD++LT+ + I SA+ + +F +KN + +S ++ LS + LA +
Sbjct: 646 GTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSV-AALSLIALATLM 704
Query: 648 EYDFP--PFMVLIIAVLNDG 665
+ P +L I +L DG
Sbjct: 705 GFPNPLNAMQILWINILMDG 724
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 234 bits (598), Expect = 2e-65
Identities = 215/841 (25%), Positives = 365/841 (43%), Gaps = 118/841 (14%)
Query: 23 ARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKL-EKKPENKFLKFLSFMWNPLSWVM 81
+++ + + +LG GL++ + RL FG N+ E+K + NP +++
Sbjct: 16 SQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYIL 75
Query: 82 ETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSI-SFIEESNAENATAALMAHLTPKT 140
A LM ++ D ++ I+ L+++ S + FI+ES AE A AL +
Sbjct: 76 --AMLMGVSYLT------DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTA 127
Query: 141 KVLR------DGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESL 194
VLR +G E LVPGD+I + GD+IPADAR++ L I+QS LTGESL
Sbjct: 128 TVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESL 187
Query: 195 TVTKET-------------------GDEVFSGLTCKHV-----HSFFGKAADLVDSTEVV 230
V K G V SG V ++FG A
Sbjct: 188 PVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQ 247
Query: 231 GHFQQVLTSIGNFCICFITVGMILEIIVMFPI---------QHRLYRDRI------NML- 274
F + + S+ I F M++ + V+ I + L+ + ML
Sbjct: 248 TAFDKGVKSVSKLLIRF----MLVMVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLP 303
Query: 275 ---SVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFN 331
S LA + +S++ I K ++AI+ MD+LC+ KT LT +++ ++ I+
Sbjct: 304 MIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELE-KHIDSSG 362
Query: 332 RDMDKDILVLLAARASRLENQDAIDAAIINMLAD--PKEARANINEVHFLPFNPVDKRTA 389
++ + + + ++ +D A++ L + ++ + +V +PF+ +R +
Sbjct: 363 ETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLS 422
Query: 390 ITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKV--------HEIINKLAE---KGLRS 438
+ + KGA E++L +C K GG V E+ + AE +G+R
Sbjct: 423 VVVENRAEVTRLICKGAVEEMLTVCTHKRF-GGAVVTLSESEKSELQDMTAEMNRQGIRV 481
Query: 439 LAVAVQEVPEMTEDSPGGPRS---FCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDH 495
+AVA + + D G L DPP+ + + I K G+ VK++TGD+
Sbjct: 482 IAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDN 541
Query: 496 LAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE----HKYE 551
+ + +GI N LLG D E L +EL + + +FA K
Sbjct: 542 EIVTARICQEVGIDAN----DFLLGADI---EELSDEELARELRKYH-IFARLTPMQKSR 593
Query: 552 IVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSA 611
I+ +L++ H VG GDG+NDAPAL+KAD+GI+V A + A+ A+DI+L E L V+
Sbjct: 594 IIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEASDIILLEKSLMVLEEG 653
Query: 612 VLTSRTVF-QIMKNCMIHAVSITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITI 670
V+ R F I+K + A S ++ V A I +LI +L D + +T+
Sbjct: 654 VIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTL 713
Query: 671 SKGRVKSSL--RPDGWKLNEIFAAGIVIG---NYLALVTILFYWVVVHTDFFETHFHVRS 725
++ +P W+ + + IG + + T L W V
Sbjct: 714 PWDKMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVFS------------ 761
Query: 726 LSSNTEEISSAVH---LQVSIISQALIF-VTRSQSWSFLE-RPGALLMCAFVLAQLVATL 780
+NT E + V ++SQ L+ + R++ F++ R A +M A +L + +
Sbjct: 762 --ANTVEEQALFQSGWFVVGLLSQTLVVHMIRTEKIPFIQSRAAAPVMIATLLVMALGII 819
Query: 781 I 781
I
Sbjct: 820 I 820
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 225 bits (575), Expect = 6e-62
Identities = 197/689 (28%), Positives = 309/689 (44%), Gaps = 103/689 (14%)
Query: 23 ARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKL-EKKPENKFLKFLSFMWNPLSWVM 81
A L+E L T RQGL+ EDA RL+ +G N++ +KP + ++ L NP +V+
Sbjct: 28 AANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVL 87
Query: 82 ETAAL----MAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLT 137
A L G+ D + I+ +++++ + F +E + A AL A +
Sbjct: 88 MVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVR 147
Query: 138 PKTKVLR------DGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTG 191
VLR + +E LVPGDI+ + GD+IPAD RL+E L I Q+ LTG
Sbjct: 148 TTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTG 207
Query: 192 ESLTVTK--------------ETGDE---------------VFSGLTCKHV-----HSFF 217
E+L V K DE V SG V ++F
Sbjct: 208 EALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYF 267
Query: 218 GKAADLVDSTEVVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRINMLSVT 277
G A + T F + + S+ I F M++ + V+ I D + L
Sbjct: 268 GSLAKSIVGTRAQTAFDRGVNSVSWLLIRF----MLVMVPVVLLINGFTKGDWLEALLFA 323
Query: 278 LAIA------------SYRLSQRGAIT--------KRMTAIEEMARMDVLCSVKTAALTL 317
LA+A S L+ +GAI KR+ AI+ MDVLC+ KT LT
Sbjct: 324 LAVAVGLTPEMLPMIVSSNLA-KGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQ 382
Query: 318 NRLTVDRNLIEVFNRDMDKDILVLLAARASRLEN--QDAIDAAIINMLADPKEARA---N 372
+R+ ++ +L +V R D+ +L LA S ++ ++ +D A++ A+
Sbjct: 383 DRIILEHHL-DVSGRK-DERVL-QLAWLNSFHQSGMKNLMDQAVVA-FAEGNPEIVKPAG 438
Query: 373 INEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEI----- 427
+V LPF+ V +R ++ D++G KGA E++L + + G V +
Sbjct: 439 YRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRD-GDTVRPLDEARR 497
Query: 428 --INKLAE----KGLRSLAVAVQEVPEMTEDSP---GGPRSF--CGLLPLFDPPRHDSSD 476
+ LAE G R L VA +E+P + R G L DPP+ ++
Sbjct: 498 ERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAP 557
Query: 477 TIHRALK-LGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELI 535
I AL+ GV VK++TGD+ + + R +G+ P LLG + + + + +
Sbjct: 558 AI-AALRENGVAVKVLTGDNPIVTAKICREVGLE----PGEPLLGTEIEAMDDAALAREV 612
Query: 536 EKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGA 595
E+ F + K ++K LQ H VG GDG+NDAPAL+ AD+GI+V + A+ +
Sbjct: 613 EERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADIAKES 672
Query: 596 ADIVLTEPGLSVICSAVLTSRTVF-QIMK 623
ADI+L E L V+ V+ R F I+K
Sbjct: 673 ADIILLEKSLMVLEEGVIKGRETFGNIIK 701
|
Length = 903 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 213 bits (545), Expect = 6e-58
Identities = 174/679 (25%), Positives = 279/679 (41%), Gaps = 109/679 (16%)
Query: 41 LSSEDAEVRLKFFGSNKLEKKPENKFLKFLSFMWNPLSWVM----ETAALMAIALA---- 92
LSS E R K +G N+L PE FL +W LS AA++++ L
Sbjct: 62 LSSSTLERREKVYGKNEL---PEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEP 118
Query: 93 --NGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTP-KTKVLRDGQWK 149
W + V I+ +I+ ++ + + E L + K V+R GQ +
Sbjct: 119 GEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQ 178
Query: 150 EQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKE--------TG 201
+ +V GDI+S+ GDV+PAD + G L+ID+S +TGES + K +G
Sbjct: 179 QISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGPVQDPFLLSG 238
Query: 202 DEVFSGL-----TCKHVHSFFGKAADLV-----DSTEVVGHFQQVLTSIGNF----CICF 247
V G T V+SF GK + DST + ++ IG F +
Sbjct: 239 TVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLSELAGLIGKFGMGSAVLL 298
Query: 248 ITVGMILEIIVMFPIQHRLYRDRINM---------------------LSVTLAIA--SYR 284
V + + + R + L+VT+A+A +
Sbjct: 299 FLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKK 358
Query: 285 LSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLI--EVFNRDMD------- 335
+ + + + + A E M +CS KT LT N ++V + I + FN
Sbjct: 359 MMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKH 418
Query: 336 -KDILVLLAARASRLENQ-----------DAIDAAIINM----LADPKEARANINEVHFL 379
++ILV + S E + A+++ L D +E RA V
Sbjct: 419 VRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLDFGLLLLRDYQEVRAEEKVVKIY 478
Query: 380 PFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEI-----------I 428
PFN K ++ S G + KGA E +L C+++ + G+ I I
Sbjct: 479 PFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCADVI 538
Query: 429 NKLAEKGLRSLAVAVQEVPEMTE---DSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLG 485
LA LR++ +A ++ D P + G++ + DP R + + + G
Sbjct: 539 EPLASDALRTICLAYRDFAPEEFPRKDYPNKGLTLIGVVGIKDPLRPGVREAVQECQRAG 598
Query: 486 VCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVF 545
+ V+M+TGD++ AK R GI T L + E +L +E+ V
Sbjct: 599 ITVRMVTGDNIDTAKAIARNCGILTFGG-----LAMEGKEFRSLVYEEMDPILPKLR-VL 652
Query: 546 A----EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-GATEAARGAADIVL 600
A K +V +L++ VV +TGDG NDAPALK AD+G ++ TE A+ A+DI+L
Sbjct: 653 ARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIIL 712
Query: 601 TEPGLSVICSAVLTSRTVF 619
+ + I AV R V+
Sbjct: 713 LDDNFASIVRAVKWGRNVY 731
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 211 bits (539), Expect = 2e-57
Identities = 193/688 (28%), Positives = 317/688 (46%), Gaps = 120/688 (17%)
Query: 20 IDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLE-KKPENKFLKFLSFMWNPLS 78
+ A +P +E++ T +GL+ + E + G N+L +KP ++ NP +
Sbjct: 47 LKAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFN 106
Query: 79 WVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTP 138
++ L AI+ A D + I ++ I++ ++FI+E+ + A AL A ++
Sbjct: 107 ILL--TILGAISYAT-----EDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSN 159
Query: 139 KTKVLR------DGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGE 192
VLR + W E LVPGDII + GD+IPAD R+L+ L + Q+ LTGE
Sbjct: 160 TATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGE 219
Query: 193 SLTVTKET-------------------GDEVFSGLTCKHV-----HSFFGKAADLVDSTE 228
SL V K G V SG V +++FG+ A V +
Sbjct: 220 SLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQD 279
Query: 229 -VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRIN-------------ML 274
FQQ ++ + I F+ +++ +V+ IN L
Sbjct: 280 SEPNAFQQGISRVSWLLIRFM---LVMAPVVLL----------INGYTKGDWWEAALFAL 326
Query: 275 SV---------------TLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNR 319
SV TLA + +LS++ I KR+ AI+ MD+LC+ KT LT ++
Sbjct: 327 SVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDK 386
Query: 320 LTVDRNLIEVFNRDMDKDILVLLAA-----RASRLENQDAIDAAIINMLADPKEARANIN 374
+ ++ + ++ + ++ VL +A + L+N +D A++ + +
Sbjct: 387 IVLENH-TDISGKTSER---VLHSAWLNSHYQTGLKN--LLDTAVLEGVDEESARSLASR 440
Query: 375 --EVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGG---------- 422
++ +PF+ +R ++ ++ + KGA E+ILN+C + G
Sbjct: 441 WQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLR 500
Query: 423 KVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRS---FCGLLPLFDPPRHDSSDTIH 479
++ + + L +GLR +AVA + +P D S G + DPP+ ++ +
Sbjct: 501 RIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPAL- 559
Query: 480 RALKL-GVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKA 538
+ALK GV VK++TGD +A + +G+ +L+G D E L DEL A
Sbjct: 560 KALKASGVTVKILTGDSELVAAKVCHEVGLDAG----EVLIGSDI---ETLSDDELANLA 612
Query: 539 DGFTDVFAE----HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARG 594
+ T +FA HK IV +L+ + HVVG GDG+NDAPAL+ ADIGI+V GA + AR
Sbjct: 613 ER-TTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIARE 671
Query: 595 AADIVLTEPGLSVICSAVLTSRTVFQIM 622
AADI+L E L V+ V+ R F M
Sbjct: 672 AADIILLEKSLMVLEEGVIEGRRTFANM 699
|
Length = 902 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 184 bits (470), Expect = 5e-50
Identities = 154/621 (24%), Positives = 257/621 (41%), Gaps = 115/621 (18%)
Query: 86 LMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKT--KVL 143
LMA+A G + ++ L ++ ++ + A +A +AL+A L P T +
Sbjct: 4 LMALATIAAYAMG-LVLEGALLLFLFLLGETLEERAKGRASDALSALLA-LAPSTARVLQ 61
Query: 144 RDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETGDE 203
DG +E L GDI+ ++ G+ IP D ++ G+ +D+S LTGES+ V K+ GDE
Sbjct: 62 GDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGESE-VDESALTGESMPVEKKEGDE 120
Query: 204 VFSG-------LTCKHVH----SFFGKAADLVDSTEVV-GHFQQVLTSIGNFCICFITVG 251
VF+G LT + S + +LV+ + Q++ I ++ + +
Sbjct: 121 VFAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEAQSSKAPIQRLADRIASYYVPAVLAI 180
Query: 252 MILEIIVMFPIQHR--LYRDRINM---------LSVTLAI--ASYRLSQRGAITKRMTAI 298
+L +V + LYR + L+ +AI A ++RG + K A+
Sbjct: 181 ALLTFVVWLALGALGALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDAL 240
Query: 299 EEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQD--AID 356
E++A++ + KT LT + TV IE + + +L A A+ LE +
Sbjct: 241 EKLAKVKTVVFDKTGTLTTGKPTVVD--IEPLDDASISEEELL--ALAAALEQSSSHPLA 296
Query: 357 AAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQIL----N 412
AI+ A+ L + + G A+ E++
Sbjct: 297 RAIVR------YAKK-----RGLELPKQEDVEEVP-----GKGVEATVDGGEEVRIGNPR 340
Query: 413 MCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRH 472
+ E +++N+ +G + VAV G++ L D R
Sbjct: 341 FLELAIEPISASPDLLNEGESQGKTVVFVAVDG-------------ELLGVIALRDQLRP 387
Query: 473 DSSDTI---HRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEAL 529
++ + I RA + + M+TGD+ + A+ LGI
Sbjct: 388 EAKEAIAALKRAGGIKLV--MLTGDNRSAAEAVAAELGI--------------------- 424
Query: 530 PVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGAT 589
DE+ ++ E K IVK LQE+ VV M GDG+NDAPAL AD+GIA+ +
Sbjct: 425 --DEV------HAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGS 476
Query: 590 EAARGAADIVLTEPGLSVICSAVLTSRTVFQIMK-NCMIHAVSITIHIVLSFVLLALIWE 648
+ A AADIVL LS + +A+ SR +I+K N ++ + L + LA
Sbjct: 477 DVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQN-----LAWALGYNLVAIPLAAGGL 531
Query: 649 YDFPPFMVL------IIAVLN 663
VL ++ VLN
Sbjct: 532 LPLWLLAVLLHEGSTVLVVLN 552
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 184 bits (469), Expect = 8e-49
Identities = 143/578 (24%), Positives = 228/578 (39%), Gaps = 109/578 (18%)
Query: 84 AALMAIALANGGGQGPDWQDSVGIVCLLIINSSIS-FIEE---SNAENATAALMAHLTPK 139
A + A A + P + + ++ L + ++E A A AL+ L PK
Sbjct: 156 ATIGAYAYSLYATLFPVYFEEAAMLIFLF---LLGRYLEARAKGRARRAIRALLD-LAPK 211
Query: 140 T--KVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVT 197
T V DG+ +E + GDI+ ++ G+ IP D ++ G +D+S LTGESL V
Sbjct: 212 TATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSS-VDESMLTGESLPVE 270
Query: 198 KETGDEVFSG-------LTCK--HV--HSFFGKAADLV-DSTEVVGHFQQVLTSI-GNFC 244
K+ GDEVF+G LT + V + + LV ++ Q++ + F
Sbjct: 271 KKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFV 330
Query: 245 ICFITVGMILEIIVMFPIQHRLYRDRINMLSV---------------TLAIASYRLSQRG 289
+ + + + L+V + + R ++RG
Sbjct: 331 PVVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRG 390
Query: 290 AITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRL 349
+ K A+E +A++D + KT LT + V + + D + ++L L AA
Sbjct: 391 ILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTD--VVALDGD-EDELLALAAALEQHS 447
Query: 350 ENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAIT----YTDSEGNWYRASKG 405
E+ + AI+ A+ V+ I + +G G
Sbjct: 448 EH--PLAKAIVKAAAERGLP-------------DVEDFEEIPGRGVEAEVDGERVLV--G 490
Query: 406 APEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLP 465
+ E+ + E I L +G + VAV G++
Sbjct: 491 NARLL----GEEGIDLPLLSERIEALESEGKTVVFVAVDGK-------------LVGVIA 533
Query: 466 LFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDE 525
L D R D+ + I LG+ V M+TGD+ A+ + LGI D+
Sbjct: 534 LADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI-------------DEVR 580
Query: 526 NEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV 585
E LP E K EIV+ LQ + V M GDG+NDAPAL AD+GIA+
Sbjct: 581 AELLP----------------EDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAM 624
Query: 586 AGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMK 623
T+ A AAD+VL LS + A+ SR +I+K
Sbjct: 625 GSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIK 662
|
Length = 713 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 179 bits (455), Expect = 2e-46
Identities = 200/776 (25%), Positives = 325/776 (41%), Gaps = 155/776 (19%)
Query: 20 IDLARLPLDEVFGQLGTT-RQGLSSEDAEVRLKFFGSNKLEKKPEN----KFLKFLSFMW 74
+D +L LDE+ + GT +GLS+ A L G N L P KF + L +
Sbjct: 15 MDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGF 74
Query: 75 NPLSWVMETAALMAIALANGGGQGPDWQD-SVGIV--CLLIINSSISFIEESNAENATAA 131
+ L W+ +A + + P + +G+V ++II S+ +E+ + +
Sbjct: 75 SMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMES 134
Query: 132 LMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTG 191
+ + V+RDG+ +A +V GD++ +K GD IPAD R++ K+D S LTG
Sbjct: 135 FKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQGCKVDNSSLTG 194
Query: 192 ESLTVTK----------ETGDEVFSGLTCKHV-----------HSFFGKAADLVDSTEV- 229
ES T+ ET + F C + G+ A L E
Sbjct: 195 ESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENG 254
Query: 230 -------VGHFQQVLTSIGNFC-ICFITVGMILE-------IIVMFPIQHRLYRDRINML 274
+ HF ++T + F + F + +IL I ++ I + + +
Sbjct: 255 KTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATV 314
Query: 275 SVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTV-----DRNLIEV 329
+V L + + R++++ + K + A+E + +CS KT LT NR+TV D + E
Sbjct: 315 TVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEA 374
Query: 330 ------FNRDMDKDILVLLA--------ARASRLENQ------------DAIDAAIINM- 362
DK LA RA Q DA ++A++
Sbjct: 375 DTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCI 434
Query: 363 ---LADPKEARANINEVHFLPFNPVDKRTAITYT--DSEGNWY-RASKGAPEQILNMCQ- 415
L E R +V +PFN +K + D + KGAPE+IL C
Sbjct: 435 ELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSS 494
Query: 416 -----EKEEIGGKVHEIINK-------LAEK--GLRSLAVAVQEVPEM----TEDS--PG 455
+++ + ++ E L E+ G L + ++ PE T+D P
Sbjct: 495 ILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPT 554
Query: 456 GPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDH----LAIAKETG-------- 503
F GL+ + DPPR D + + G+ V M+TGDH AIAK G
Sbjct: 555 DNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNET 614
Query: 504 -----RRLGIGTNMYPSSLLLGRDKD-------ENEALPVDELIEKADGFTD-VFA---- 546
RL I P S + RD + + + ++L E T+ VFA
Sbjct: 615 VEDIAARLNI-----PVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSP 669
Query: 547 EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA--VAGATEAARGAADIVLTEPG 604
+ K IV+ Q + +V +TGDGVND+PALKKADIG+A +AG ++ ++ AAD++L +
Sbjct: 670 QQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAG-SDVSKQAADMILLDDN 728
Query: 605 LSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWEYDFPPFMVLIIA 660
+ I + V R +F +K + A ++T +I + PF++ IIA
Sbjct: 729 FASIVTGVEEGRLIFDNLKKSI--AYTLTSNIP------------EITPFLIFIIA 770
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 167 bits (426), Expect = 5e-44
Identities = 133/540 (24%), Positives = 221/540 (40%), Gaps = 104/540 (19%)
Query: 119 FIEESNAENATAAL--MAHLTPKT--KVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADA 174
++E A+ AL +A L P T + DG+ +E +L PGDI+ + G+ IP D
Sbjct: 69 WLEMLAKGRASDALSKLAKLQPSTATLLTDDGEIEEVPVELLQPGDIVRVLPGEKIPVDG 128
Query: 175 RLLEGDPLKIDQSELTGESLTVTKETGDEVFSGLTCKHVHSFFGKAADLVDST---EVVG 231
++EG+ ++D+S +TGESL V K+ GD V +G S +A + T ++V
Sbjct: 129 TVIEGES-EVDESLVTGESLPVPKKVGDPVIAGTVNGT-GSLVVRATATGEDTTLAQIVR 186
Query: 232 HFQQVLTS---IGN--------FCICFITVGMILEIIVMFPIQHRLYRDRINMLSVT--- 277
+Q S I F I + +I +I + + + ++VT
Sbjct: 187 LVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWLILGAD--FVFAL-EVAVTVLI 243
Query: 278 --------LAI------ASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVD 323
LA A+ ++ G + K A+E A +D + KT LT + TV
Sbjct: 244 IACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTV- 302
Query: 324 RNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNP 383
+ VF ++L L AA + E+ + AI++
Sbjct: 303 -TDVHVFGESDRDELLALAAALEAGSEH--PLAKAIVSYA-------------------- 339
Query: 384 VDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAV 443
A T S+ + ++A G + + G +++ + K +
Sbjct: 340 ----KAKGITLSQVSDFKAIPGI--GVEGTVEGHTIQLGN-EKLLGENGLKTDGEVEEGG 392
Query: 444 QEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETG 503
+ + G+L L D + ++ + I + G+ M+TGD+ AK
Sbjct: 393 GTTSVLVAVN----GELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVA 448
Query: 504 RRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVV 563
+ LGI N+ E LP + K ++K LQEK VV
Sbjct: 449 KELGI-ENVR------------AEVLP----------------DDKAALIKKLQEKGKVV 479
Query: 564 GMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMK 623
M GDG+NDAPAL +AD+GIA+ T+ A AAD+VL L+ + +A+ SR + +K
Sbjct: 480 AMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIK 539
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 148 bits (374), Expect = 2e-36
Identities = 92/271 (33%), Positives = 137/271 (50%), Gaps = 30/271 (11%)
Query: 403 SKGAPEQILNMCQE-----------KEEIGGKVHEIINKLAE-KGLRSLAVAVQEVP-EM 449
KGAPE +L C +++ + +I ++ K LR LA+A +++P
Sbjct: 449 VKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPR 508
Query: 450 TEDSPGGPR---------SFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAK 500
ED P +F G++ + DPPR + +D I + G+ V MITGD+ A+
Sbjct: 509 EEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAE 568
Query: 501 ETGRRLGIGTNMYPSSLLL-----GRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKI 555
RR+GI P + GR+ DE A F+ V HK E+V++
Sbjct: 569 AICRRIGI---FSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVEL 625
Query: 556 LQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTS 615
LQE+ +V MTGDGVNDAPALKKADIGIA+ TE A+ A+D+VL + + I +AV
Sbjct: 626 LQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEG 685
Query: 616 RTVFQIMKNCMIHAVSITIHIVLSFVLLALI 646
R ++ MK + + +S I V+ L A +
Sbjct: 686 RAIYNNMKQFIRYMISSNIGEVVCIFLTAAL 716
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 136 bits (344), Expect = 3e-36
Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 29/222 (13%)
Query: 107 IVCLLIINSSISFIEESNAENATAALMAHLTPK-TKVLRDGQWKEQDAAVLVPGDIISIK 165
I+ L++IN+ + +E A A AL L P V+RDG+ +E A LV GDI+ +K
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 166 FGDVIPADARLLEGDPLKIDQSELTGESLTVTKETGDEVFSGLTCK---------HV--H 214
GD +PAD R++EG L++D+S LTGESL V K GD VF+G
Sbjct: 62 PGDRVPADGRIIEGS-LEVDESALTGESLPVEKSRGDTVFAGTVVLSGELKVIVTATGED 120
Query: 215 SFFGKAADLVDSTEVV-GHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRINM 273
+ GK A LV+ + Q++L + + + IL ++ F +
Sbjct: 121 TELGKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFLIWFFRGGDFLEALLRA 180
Query: 274 LSV---------------TLAIASYRLSQRGAITKRMTAIEE 300
L+V LA+ + RL+++G + K ++A+E
Sbjct: 181 LAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 6e-26
Identities = 89/337 (26%), Positives = 148/337 (43%), Gaps = 48/337 (14%)
Query: 327 IEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDK 386
I VF + D L N++ + + + K A + PF+ K
Sbjct: 482 IHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQH---NEKPGSAQFEFIAEFPFDSEIK 538
Query: 387 RTAITYTDSEGNWYRA-SKGAPEQILNMCQEKEEIGGKVH--------EIINK----LAE 433
R A Y D+ G Y +KGA E+I+ C G E+I LA
Sbjct: 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAA 598
Query: 434 KGLRSLAVAVQ-----EVPEMTEDSPGGPRS-------FCGLLPLFDPPRHDSSDTIHRA 481
+GLR LA A + + + + R+ F GL+ ++DPPR++S+ + +
Sbjct: 599 EGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKC 658
Query: 482 LKLGVCVKMITGDHLAIAKETGRRLGI-GTNMYP------SSLLL------GRDKDENEA 528
+ G+ V M+TGD AK + +GI N S+++ +E +
Sbjct: 659 HQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDD 718
Query: 529 LPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-G 587
L L+ + K ++++ L +K MTGDGVND+P+LK A++GIA+
Sbjct: 719 LKALCLV-----IARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGIN 773
Query: 588 ATEAARGAADIVLTEPGLSVICSAVLTSRTVF-QIMK 623
++ A+ A+DIVL++ + I +A+ R +F IMK
Sbjct: 774 GSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMK 810
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 7e-25
Identities = 138/579 (23%), Positives = 228/579 (39%), Gaps = 116/579 (20%)
Query: 75 NPLSWVMETAALMAIAL----ANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATA 130
NP+ +V+E +++ L GG G ++ I +L + E+ AE
Sbjct: 32 NPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGK 91
Query: 131 ALMAHL-----TPKTKVLR-DGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKI 184
A L ++LR DG + A L GDI+ ++ G++IP+D ++EG +
Sbjct: 92 AQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SV 150
Query: 185 DQSELTGESLTVTKETG--------------DEVFSGLTCKHVHSFFGKAADLVDSTEVV 230
D+S +TGES V +E+G D + +T +F + LV+ E
Sbjct: 151 DESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAER- 209
Query: 231 GHFQQVLTSIGNFCICFITVGMILEIIV--MFPIQHRLYRDRINM-----LSVTLA---- 279
Q+ I I + +I + V ++P ++ L V L
Sbjct: 210 ---QKTPNEIALT-ILLSGLTLIFLLAVATLYPFAIYSGGGAASVTVLVALLVCLIPTTI 265
Query: 280 --------IASY-RLSQRGAITKRMTAIEEMARMDVLCSVKTAALTL-NRLTVDRNLIEV 329
IA R++Q I A+E +D L KT +TL NR + I V
Sbjct: 266 GGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE--FIPV 323
Query: 330 FNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVH----FLPFNPVD 385
+ ++ L A AS L ++ +I+ LA +++ F+PF
Sbjct: 324 --PGVSEEELADAAQLAS-LADETPEGRSIVE-LAKKLGIELREDDLQSHAEFVPFTAQT 379
Query: 386 KRTAITYTDSEGNWYRASKGAPEQILNMCQEKE-EIGGKVHEIINKLAEKGLRSLAVAVQ 444
+ + + G R KGA + I +E+ I + +++++ G L V
Sbjct: 380 RMSGVDLPG--GREIR--KGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVEN 435
Query: 445 EVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGD-HL---AIAK 500
G++ L D + + K+G+ MITGD L AIA
Sbjct: 436 GR-------------ILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAA 482
Query: 501 ETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKK 560
E G VD+ I +A E K +++ Q +
Sbjct: 483 EAG---------------------------VDDFIAEAT------PEDKLALIRQEQAEG 509
Query: 561 HVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIV 599
+V MTGDG NDAPAL +AD+G+A+ T+AA+ AA++V
Sbjct: 510 RLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 548
|
Length = 681 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 8e-22
Identities = 76/279 (27%), Positives = 129/279 (46%), Gaps = 56/279 (20%)
Query: 99 PDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVP 158
+ + I+ +L+ N+ + +E NAE A AL + + KVLRDG+W A LVP
Sbjct: 34 TAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRDGRWSVIKAKDLVP 93
Query: 159 GDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKET-------------GDEVF 205
GDI+ + GD +PAD R+L L++DQS LTGES++V K T + +F
Sbjct: 94 GDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLF 153
Query: 206 SGLTCKH-----------VHSFFGK-AADLVDSTEVVGHFQQVLTS--------IGNFCI 245
SG + + GK ++ + + Q+ L IG CI
Sbjct: 154 SGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICI 213
Query: 246 -CF-ITVGMILEIIV-MFPIQHRLYRDRINMLSVTLAIASY-----------------RL 285
+ I +G + + IQ +Y +I +V LA+A+ ++
Sbjct: 214 LVWVINIGHFNDPALGGGWIQGAIYYFKI---AVALAVAAIPEGLPAVITTCLALGTRKM 270
Query: 286 SQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDR 324
+++ AI +++ ++E + V+CS KT LT N+++V +
Sbjct: 271 AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCK 309
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 1e-21
Identities = 101/467 (21%), Positives = 172/467 (36%), Gaps = 109/467 (23%)
Query: 274 LSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTV--------DRN 325
LS+ + + RL ++G I ++DV C KT LT + L + ++
Sbjct: 418 LSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQE 477
Query: 326 LIEVFNRDMDKDILVLLAARAS-----RLENQ---DAIDAAIINMLADPKEARANINE-- 375
+++ D + A A+ +LE + D +D + E E
Sbjct: 478 FLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPT 537
Query: 376 -----------------VHFLPFNPVDKRTA-ITYTDSEGNWYRASKGAPEQILNMCQEK 417
+ F+ +R + I T+ E + KGAPE I ++C
Sbjct: 538 SILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLC-SP 596
Query: 418 EEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMT--------EDSPGGPRSFCGLLPLFDP 469
E + E++ +G R LA+A +E+P++T D+ +F G + +P
Sbjct: 597 ETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENP 656
Query: 470 PRHDSSDTIHRALKLGVCVKMITGDHL----AIAKETG-----RRLGIGTNMYPSS---- 516
+ D+ + I + + MITGD+ +A+E G L + P S
Sbjct: 657 LKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPN 716
Query: 517 LLLGRDKDENEALPVDELIEKADGF----------------------------------- 541
+ D I G
Sbjct: 717 QIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLL 776
Query: 542 --TDVFA----EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGA 595
T VFA + K +V++LQ+ + VGM GDG ND ALK+AD+GI+++ A A A
Sbjct: 777 SHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEAE--ASVA 834
Query: 596 ADIVLTEPGLSVIC-------SAVLTSRTVFQIMK-NCMIHAVSITI 634
A +S + A++TS +F+ M +I S++I
Sbjct: 835 APFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI 881
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 98.5 bits (246), Expect = 2e-21
Identities = 66/190 (34%), Positives = 94/190 (49%), Gaps = 32/190 (16%)
Query: 462 GLLPLFDPPRHDSSDTIHRALKLGVC-VKMITGDHLAIAKETGRRLGIGTNMYPSSLLLG 520
G + L D PR D+++ I LG+ V M+TGD A+A+ R LGI
Sbjct: 355 GYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGI------------ 402
Query: 521 RDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKAD 580
D+ E LP E K EIVK L+EK V M GDG+NDAPAL AD
Sbjct: 403 -DEVHAELLP----------------EDKLEIVKELREKYGPVAMVGDGINDAPALAAAD 445
Query: 581 IGIAVAGA-TEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMK-NCMIHAVSITIHIVL 638
+GIA+ + ++ A AD+VL LS + A+ +R +I+K N +I I + I+L
Sbjct: 446 VGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILL 505
Query: 639 SFVLLALIWE 648
+ + +W
Sbjct: 506 ALFGVLPLWL 515
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 94.0 bits (233), Expect = 1e-19
Identities = 126/550 (22%), Positives = 223/550 (40%), Gaps = 102/550 (18%)
Query: 141 KVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKET 200
++ +DG ++ DA+ L G I+ + G+ IP D ++++G +D+S +TGES V KE+
Sbjct: 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKES 166
Query: 201 G---DEVFSG-----------LTCKHVHSFFGKAADLVDSTEVVGHFQQV--LTSIGNFC 244
G D V G +T + HSF K LV+ ++ T +
Sbjct: 167 GGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLT 226
Query: 245 ICFITVGMILEIIVMFPIQHRLYRD----------------RINMLSVTLAIASY-RLSQ 287
I F+ V I+ M+P+ L + I L + IA R++Q
Sbjct: 227 IIFLVV-----ILTMYPLAKFLNFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQ 281
Query: 288 RGAITKRMTAIEEMARMDVLCSVKTAALTL-NRLTVDRNLIEVFNRDMDKDILVLLAARA 346
+ K ++E ++VL KT +T NR+ I V + ++ ++ AA
Sbjct: 282 FNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADA--FIPVKSSSFER---LVKAAYE 336
Query: 347 SRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGA 406
S + + D + I LA + ++PF + + + +T E KGA
Sbjct: 337 SSIAD-DTPEGRSIVKLAYKQHIDLPQEVGEYIPFTAETRMSGVKFTTRE-----VYKGA 390
Query: 407 PEQILNMCQEKEEIGGKVHE----IINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCG 462
P +M + +E GG + ++ +++KG L V G
Sbjct: 391 PN---SMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLEDNE-------------ILG 434
Query: 463 LLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRD 522
++ L D + + ++G+ M TGD+ A + G+ D
Sbjct: 435 VIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV-------------D 481
Query: 523 KDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 582
+ E P E K +++ Q K H+V MTGDG NDAPAL +A++G
Sbjct: 482 RFVAECKP----------------EDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVG 525
Query: 583 IAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVL 642
+A+ T +A+ AA+++ + + + VL + + +M + SI I F +
Sbjct: 526 LAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQL--LMTRGSLTTFSIANDIAKYFAI 583
Query: 643 LALIWEYDFP 652
L ++ P
Sbjct: 584 LPAMFMAAMP 593
|
Length = 673 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 93.4 bits (232), Expect = 1e-19
Identities = 140/574 (24%), Positives = 229/574 (39%), Gaps = 99/574 (17%)
Query: 71 SFMWNPLSWVMETAALM----AIALANGGGQGPDWQDSVGIVC-LLIINSSISFIEESNA 125
+ NP+ +++ +L+ IA A+ G G + I+ +L I + E+ A
Sbjct: 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVA 87
Query: 126 ENATAALMAHL--TPKTKVLR----DGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEG 179
E A L T KT + DG + A L GDI+ ++ GDVIP D ++EG
Sbjct: 88 EGRGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG 147
Query: 180 DPLKIDQSELTGESLTVTKETG--------------DEVFSGLTCKHVHSFFGKAADLVD 225
+D+S +TGES V KE+G D + T +F + LV+
Sbjct: 148 VA-SVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVE 206
Query: 226 STEVVGHFQQV-LTSI-GNFCICFITV-----------GMILEIIVMFPIQHRLYRDRIN 272
+ ++ LT + + F+ V G + + V+ + L I
Sbjct: 207 GAQRRKTPNEIALTILLIALTLVFLLVTATLWPFAAYGGNAISVTVLVALLVCLIPTTIG 266
Query: 273 MLSVTLAIASY-RLSQRGAITKRMTAIEEMARMDVLCSVKTAALTL-NRLTVDRNLIEVF 330
L + IA R+ I A+E +D L KT +TL NRL + I
Sbjct: 267 GLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASE--FIPA- 323
Query: 331 NRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAI 390
+ +D+ L A AS + D + I +LA R + + F +T +
Sbjct: 324 -QGVDEKTLADAAQLASLAD--DTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRM 380
Query: 391 TYTDSEGNWYRASKGAPEQILNMCQE-KEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEM 449
+ + + N KGA + I + I + + ++++A +G L V
Sbjct: 381 SGINLD-NGRMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCEDN---- 435
Query: 450 TEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDH----LAIAKETGRR 505
G++ L D + + + K+G+ MITGD+ AIA E G
Sbjct: 436 ---------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAG-- 484
Query: 506 LGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGM 565
VD+ I +A E K +++ Q + +V M
Sbjct: 485 -------------------------VDDFIAEAT------PEDKIALIRQEQAEGKLVAM 513
Query: 566 TGDGVNDAPALKKADIGIAVAGATEAARGAADIV 599
TGDG NDAPAL +AD+G+A+ T+AA+ AA++V
Sbjct: 514 TGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 547
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 89.7 bits (222), Expect = 3e-18
Identities = 59/168 (35%), Positives = 89/168 (52%), Gaps = 9/168 (5%)
Query: 34 LGTT-RQGLSSEDAEVRLKFFGSNKLEKKPENKFLK-FLSFMWNPLSWVMETAALMAIAL 91
+GT+ +GL+ ++A+ RLK G N+LE L + N + V+ AA ++ A+
Sbjct: 19 IGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAM 78
Query: 92 ANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQ 151
DW + I ++ +N I FI+E AE +L +P V+R+G+
Sbjct: 79 H-------DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAI 131
Query: 152 DAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKE 199
D+ LVPGDI +K GD IPAD RL+E D++ LTGESL V K+
Sbjct: 132 DSHDLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKD 179
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 83.5 bits (207), Expect = 1e-16
Identities = 65/266 (24%), Positives = 107/266 (40%), Gaps = 30/266 (11%)
Query: 86 LMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKT-KVLR 144
LMA+A G ++ + ++ L I ++ A A ALM L P T +VLR
Sbjct: 4 LMALAALGAVAIG-EYLEGALLLLLFSIGETLEEYASGRARRALKALM-ELAPDTARVLR 61
Query: 145 DGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETGDEV 204
G +E L GD++ +K G+ +P D +L G +D+S LTGES+ V K GDEV
Sbjct: 62 GGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTST-VDESALTGESVPVEKAPGDEV 120
Query: 205 FSG-------LTCKHVHSF----FGKAADLV-DSTEVVGHFQQVLTSIGNFCICFITVGM 252
F+G LT K +LV ++ Q+ + + +
Sbjct: 121 FAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIA 180
Query: 253 ILEIIVMFPIQHRLYRDRINM------------LSVTLAIAS--YRLSQRGAITKRMTAI 298
+ +V ++ + + +S A S ++ G + K A+
Sbjct: 181 LAIWLVPGLLKRWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAAL 240
Query: 299 EEMARMDVLCSVKTAALTLNRLTVDR 324
E +A++ + KT LT R V
Sbjct: 241 EALAKIKTVAFDKTGTLTTGRPKVVD 266
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 72.6 bits (179), Expect = 7e-16
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 21 DLARLPLDEVFGQLGTTRQ-GLSSEDAEVRLKFFGSNKL-EKKPENKFLKFLSFMWNPLS 78
D L L+EV +L T + GLSSE+A RL+ +G N+L K + L+FL NPL
Sbjct: 3 DWHALSLEEVLERLQTDLEKGLSSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNPLI 62
Query: 79 WVMETAALMAIAL 91
+++ AA+++ L
Sbjct: 63 YILLAAAVLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 80.9 bits (200), Expect = 1e-15
Identities = 57/171 (33%), Positives = 78/171 (45%), Gaps = 37/171 (21%)
Query: 463 LLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHL----AIAKETGRRLGIGTNMYPSSLL 518
LL + DP R DS + R K G + M+TGD+ AIAKE G
Sbjct: 644 LLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAG--------------- 688
Query: 519 LGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKK 578
+DE+I V + K E +K LQ + V M GDG+NDAPAL +
Sbjct: 689 ------------IDEVI------AGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQ 730
Query: 579 ADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHA 629
AD+GIA+ G ++ A A I L L + A+ SR + MK ++ A
Sbjct: 731 ADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGA 781
|
Length = 834 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 77.5 bits (192), Expect = 1e-14
Identities = 82/342 (23%), Positives = 126/342 (36%), Gaps = 99/342 (28%)
Query: 284 RLSQRGAITKRMTAIEEMARMDVLCSVKTAALTL-NRLTVDRNLIEVFNRDMDKDILVLL 342
R+ Q I A+E +D L KT +TL NR + + V
Sbjct: 278 RVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE--FLPVPGVTE-------- 327
Query: 343 AARASRLENQDAIDAAIINMLADP-----------------KEARANINEVHFLPFNPVD 385
++ DAA ++ LAD +E F+PF
Sbjct: 328 ---------EELADAAQLSSLADETPEGRSIVVLAKQRFNLRERDLQSLHATFVPF---- 374
Query: 386 KRTAITY---TDSEGNWYRASKGAPEQILNMCQEK-EEIGGKVHEIINKLAEKGLRSLAV 441
+A T D +G R KGA + I + ++ ++++A KG L V
Sbjct: 375 --SAQTRMSGVDLDGREIR--KGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVV 430
Query: 442 AVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGD-HL---A 497
A G++ L D + + K+G+ MITGD L A
Sbjct: 431 AEDNR-------------VLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAA 477
Query: 498 IAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQ 557
IA E G VD+ + +A E K +++ Q
Sbjct: 478 IAAEAG---------------------------VDDFLAEAT------PEDKLALIRQEQ 504
Query: 558 EKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIV 599
+ +V MTGDG NDAPAL +AD+G+A+ T+AA+ A ++V
Sbjct: 505 AEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMV 546
|
Length = 679 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 61.8 bits (151), Expect = 4e-12
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 23 ARLPLDEVFGQLGTTRQ-GLSSEDAEVRLKFFGSNKL-EKKPENKFLKFLSFMWNPLSWV 80
L ++EV +LGT + GL+ +AE RL+ +G N+L EKKP++ + FL +PL +
Sbjct: 2 HTLSVEEVLARLGTDLEKGLTEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVII 61
Query: 81 METAALMA 88
+ AA+++
Sbjct: 62 LLIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 68.9 bits (169), Expect = 7e-12
Identities = 45/142 (31%), Positives = 59/142 (41%), Gaps = 31/142 (21%)
Query: 460 FCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLL 519
GL+ L D R D+ I LG+ M+TGD+ A LGI + + LL
Sbjct: 559 VLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID---FRAGLL- 614
Query: 520 GRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKA 579
P D K + V L + + M GDG+NDAPA+K A
Sbjct: 615 ----------PED----------------KVKAVTELN-QHAPLAMVGDGINDAPAMKAA 647
Query: 580 DIGIAVAGATEAARGAADIVLT 601
IGIA+ T+ A AD LT
Sbjct: 648 SIGIAMGSGTDVALETADAALT 669
|
Length = 741 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 8e-11
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 123 SNAENATAALMAHLTPKTKV-LRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDP 181
S A +ALMA L P+T LRDG+ +E A L PGD+I + G +PAD +LL
Sbjct: 228 SRARRGVSALMA-LVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA 286
Query: 182 LKIDQSELTGESLTVTKETGDEVFSGLTC 210
D+S LTGES+ V + TG++V +G T
Sbjct: 287 -SFDESALTGESIPVERATGEKVPAGATS 314
|
Length = 741 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 1e-08
Identities = 38/182 (20%), Positives = 64/182 (35%), Gaps = 19/182 (10%)
Query: 399 WYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPR 458
A+ I+ E G E++ +L + L + + +
Sbjct: 25 LLEAAAALGVAIVIAAGENLTKEG-REELVRRLLLRALAGEELLEELLRAGATVVAVLDL 83
Query: 459 SFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLL 518
GL+ L DP + + + + G+ + ++TGD+ A R LG+ + + L
Sbjct: 84 VVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLFDALVSADLY 143
Query: 519 LGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKK 578
P ++ E A ++ L K V M GDGVND PA K
Sbjct: 144 ----GLVGVGKPDPKIFELA--------------LEELGVKPEEVLMVGDGVNDIPAAKA 185
Query: 579 AD 580
A
Sbjct: 186 AG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 3e-08
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 101 WQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGD 160
+ S+ IV + + S+S + M H V+R+G+W + LVPGD
Sbjct: 193 YYYSLCIVFMSSTSISLSVYQIRKQMQ-RLRDMVHKPQSVIVIRNGKWVTIASDELVPGD 251
Query: 161 IISIKF--GDVIPADARLLEGDPLKIDQSELTGESLTVTKE 199
I+SI +P D+ LL G + +++S LTGES+ V K
Sbjct: 252 IVSIPRPEEKTMPCDSVLLSGSCI-VNESMLTGESVPVLKF 291
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 4e-06
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 353 DAIDAAIIN----MLADPKEARANINEVHFLPFNPVDKR-TAITYTDSEGNWYRASKGAP 407
D ++A++ + D +E RA V +PFN KR + + + + + KGAP
Sbjct: 22 DPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAP 81
Query: 408 EQILNMC 414
E+IL C
Sbjct: 82 ERILERC 88
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 49.8 bits (120), Expect = 5e-06
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 141 KVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKET 200
K+ G +E A L GDI+ ++ G++IPAD ++EG +D+S +TGES V +E+
Sbjct: 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRES 166
Query: 201 GDEVFSGLT 209
G + FS +T
Sbjct: 167 GGD-FSSVT 174
|
Length = 679 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 9e-06
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 547 EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV---AGATEAARGAADIVLTEP 603
E K +I++ L+++ V M G+G ND AL++AD+GI G E AD+VL E
Sbjct: 80 EMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEI 139
Query: 604 GLSVICSA 611
+
Sbjct: 140 AEILDLLK 147
|
Length = 152 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 544 VFAEHKYEIVKILQEK-----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADI 598
V A +K + + IL K ++ V GDG ND +K A +GIA A + ADI
Sbjct: 148 VDASYKGKTLLILLRKEGISPENTV-AVGDGANDLSMIKAAGLGIAF-NAKPKLQQKADI 205
Query: 599 VLTEPGLSVI 608
+ + L+ I
Sbjct: 206 CINKKDLTDI 215
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|234910 PRK01158, PRK01158, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 6e-04
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 567 GDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEP 603
GD ND + A G+AVA A E + AAD V +
Sbjct: 180 GDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKS 216
|
Length = 230 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.001
Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 544 VFAEHKYEIVKILQEK-----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADI 598
E K + ++ L + + V GD ND P L+ A + IAV R AD+
Sbjct: 140 CDGEGKAKALRELAAELGIPLEETVAY-GDSANDLPMLEAAGLPIAV-NPKPKLRALADV 197
Query: 599 VLTEPGLSVIC 609
+ L +
Sbjct: 198 RIWPIDLRAVL 208
|
Length = 212 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.004
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 567 GDGVNDAPALKKADIGIAVAGATEAARGAADIV 599
GDG+ND L+ A G+A+ A E + AD V
Sbjct: 211 GDGMNDIEMLEAAGYGVAMGNADEELKALADYV 243
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 831 | |||
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.95 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.92 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.61 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.6 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.37 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.34 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.08 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.04 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.04 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.04 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.03 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.01 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.99 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.96 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.96 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.95 | |
| PLN02887 | 580 | hydrolase family protein | 98.93 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.9 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.89 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.87 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.81 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 98.81 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.79 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.77 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.73 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.66 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.65 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.6 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.53 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.53 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.52 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.51 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.43 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.31 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.28 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.23 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.19 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.15 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.11 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.05 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.04 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.03 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.0 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.96 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.92 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.89 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.88 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.83 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.77 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.7 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.67 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.57 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.57 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.52 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.42 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.34 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.33 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.25 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.19 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.19 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.18 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.18 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.15 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.08 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.08 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.05 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.01 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.97 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.96 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.91 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.84 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.69 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.64 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.64 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.54 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.51 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.49 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.48 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.44 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.37 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.29 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.22 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.2 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.15 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.06 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 96.04 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 95.99 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 95.94 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.9 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.88 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 95.8 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.79 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 95.65 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 95.63 | |
| PLN02940 | 382 | riboflavin kinase | 95.44 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 95.38 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.35 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 95.34 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.21 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 95.05 | |
| PLN03017 | 366 | trehalose-phosphatase | 94.93 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 94.72 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 94.64 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 94.59 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 94.48 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 94.38 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 94.25 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 94.17 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 94.13 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 94.1 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 94.0 | |
| PLN02811 | 220 | hydrolase | 93.79 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 93.39 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 93.33 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 93.14 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 92.62 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 92.57 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 92.51 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 92.36 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 92.09 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 91.5 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 91.17 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 90.61 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 90.57 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 89.76 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 89.33 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 88.9 | |
| PLN02151 | 354 | trehalose-phosphatase | 88.41 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 86.33 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 86.08 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 85.92 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 84.13 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 83.61 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 82.89 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 82.68 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 81.82 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 80.65 |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-130 Score=1088.79 Aligned_cols=794 Identities=27% Similarity=0.398 Sum_probs=649.6
Q ss_pred ccccCCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCccCCC-CCcHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC
Q 003313 21 DLARLPLDEVFGQLGTT-RQGLSSEDAEVRLKFFGSNKLEKK-PENKFLKFLSFMWNPLSWVMETAALMAIALANGGGQG 98 (831)
Q Consensus 21 ~~~~~~~~~~~~~l~~~-~~GLs~~~~~~r~~~~G~N~i~~~-~~~~~~~~~~~~~~~~~~~l~i~ail~~~~~~~~~~~ 98 (831)
+.|..+++|++..|.++ ++|||++|+.+|+++||+|+++.. ..+.|+.+++||.+++..+|+++|++|+.+.
T Consensus 3 ~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~------ 76 (972)
T KOG0202|consen 3 EAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA------ 76 (972)
T ss_pred chhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH------
Confidence 45678999999999999 889999999999999999999875 4789999999999999999999999999987
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEEe
Q 003313 99 PDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLE 178 (831)
Q Consensus 99 ~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~ 178 (831)
.|.+++.|.++++++..++++||||++|++++|+++.|+.++|+|+|+.+.+++++|||||||.|+-||+||||.++++
T Consensus 77 -~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 -DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 7889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEcccccCCCccccccC--------------CCeeeecceeee-----------ccchhhhHHHhhhccC-ccCc
Q 003313 179 GDPLKIDQSELTGESLTVTKET--------------GDEVFSGLTCKH-----------VHSFFGKAADLVDSTE-VVGH 232 (831)
Q Consensus 179 g~~~~Vdes~LTGEs~pv~K~~--------------g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~~~ 232 (831)
..++.+|||+|||||.|+.|.. .+++|+||.|.. .+|++|++.+.+++.+ .++|
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 9899999999999999999953 258999999887 8999999999998886 6999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--Hhhh---c-hhhHh-------h-----------HHH-HHHHHHHHHHHhhhc
Q 003313 233 FQQVLTSIGNFCICFITVGMILEIIV--MFPI---Q-HRLYR-------D-----------RIN-MLSVTLAIASYRLSQ 287 (831)
Q Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~-~~~~~-------~-----------~l~-~l~~~l~~~~~~l~~ 287 (831)
+|+.++.+++.+.-.+.++.+..+++ .++. + +.++. . +++ +++++||+|.+||+|
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMak 315 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAK 315 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHh
Confidence 99999999987553332323332322 1111 1 11111 1 111 788999999999999
Q ss_pred CceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecC-----------CCC------------------Ch--
Q 003313 288 RGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFN-----------RDM------------------DK-- 336 (831)
Q Consensus 288 ~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~-----------~~~------------------~~-- 336 (831)
++++||++.++|+||.+++||+|||||||+|+|.+.++++.... .++ ..
T Consensus 316 knaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~ 395 (972)
T KOG0202|consen 316 KNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDL 395 (972)
T ss_pred hhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHH
Confidence 99999999999999999999999999999999999998752110 000 11
Q ss_pred -HHHHHHHHHhccc-----------cCCChHHHHHHHHhCC-----hH---H-----------HhhccceeEEecCCCCC
Q 003313 337 -DILVLLAARASRL-----------ENQDAIDAAIINMLAD-----PK---E-----------ARANINEVHFLPFNPVD 385 (831)
Q Consensus 337 -~~~l~~a~~~~~~-----------~~~~~~~~ai~~~~~~-----~~---~-----------~~~~~~~l~~~~f~s~~ 385 (831)
.+++..++.|+.. ..+.|.|.|+...+.. .. . ....++.+.++||+++|
T Consensus 396 l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdr 475 (972)
T KOG0202|consen 396 LQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDR 475 (972)
T ss_pred HHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeeccccc
Confidence 1234444444321 1357899998876521 11 0 12233456899999999
Q ss_pred ceEEEEEEcCCCc--EEEEEccchHHHhhhccC------------chhhHHHHHHHHHHHHhccCeeeeeeeecCCCC--
Q 003313 386 KRTAITYTDSEGN--WYRASKGAPEQILNMCQE------------KEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEM-- 449 (831)
Q Consensus 386 k~~sv~v~~~~g~--~~~~~kGa~e~i~~~~~~------------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~-- 449 (831)
|+||+.+.+..|+ +..|+|||+|.|+++|+. ++..++.+.+...+|+++|+|+|++|+++.+..
T Consensus 476 K~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~ 555 (972)
T KOG0202|consen 476 KSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVP 555 (972)
T ss_pred ceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccCh
Confidence 9999999876554 688999999999999953 245678899999999999999999999976631
Q ss_pred ---------CCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCC--CCCccc
Q 003313 450 ---------TEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNM--YPSSLL 518 (831)
Q Consensus 450 ---------~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~--~~~~~~ 518 (831)
.+...|+||+|+|++++.||||++++++|+.|+++||+|+|+|||+..||.+||+++|+..+. .....+
T Consensus 556 ~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~ 635 (972)
T KOG0202|consen 556 DDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMAL 635 (972)
T ss_pred hhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcccccccc
Confidence 245689999999999999999999999999999999999999999999999999999997543 355789
Q ss_pred cCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEec-CchHHHhhhcC
Q 003313 519 LGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-GATEAARGAAD 597 (831)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~-~~~~~a~~aad 597 (831)
.|.++|.+++++++.......+|+|++|.||.+||+.||++|++|+|+|||+||+||||.|||||||| +|||+||+|||
T Consensus 636 TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsD 715 (972)
T KOG0202|consen 636 TGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASD 715 (972)
T ss_pred chhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred EEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccCCCChHHHHHHHHhhccc-hhccccCCC
Q 003313 598 IVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFV-LLALIWEYDFPPFMVLIIAVLNDGT-IITISKGRV 675 (831)
Q Consensus 598 ivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~ 675 (831)
+||.||||++|+.|+++||.+|.||++|+.|+++.|+..+..++ .+.+..|.|++|+|+||+|+++|++ +.+|+++++
T Consensus 716 MVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~ 795 (972)
T KOG0202|consen 716 MVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEPV 795 (972)
T ss_pred cEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCCC
Confidence 99999999999999999999999999999999999997655544 4567789999999999999999997 699999998
Q ss_pred CCC---CCCCccc----hHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hccc-c---cccc--ccCC---C---cHHHHH
Q 003313 676 KSS---LRPDGWK----LNEIFAAGIVIGNYLALVTILFYWVVVHT--DFFE-T---HFHV--RSLS---S---NTEEIS 734 (831)
Q Consensus 676 ~~~---~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~-~---~~~~--~~~~---~---~~~~~~ 734 (831)
++. ++|++.+ ...++.+++..|.+..+.++..|++.+.. +-.. + +|.. .++. . ......
T Consensus 796 D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~ 875 (972)
T KOG0202|consen 796 DPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPL 875 (972)
T ss_pred ChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhcccccc
Confidence 875 2333332 34566667777988888887555443321 0000 0 0000 0000 0 000123
Q ss_pred HHHHHHHHHHHHHHhhhhccCCCCCCc---CchHHHHHHHHHHHHHHHHHHHhhh--cccccccchhHHHHHHHHHHHHH
Q 003313 735 SAVHLQVSIISQALIFVTRSQSWSFLE---RPGALLMCAFVLAQLVATLIAVYAH--ISFAYISGIGWGWAGVIWLYSLV 809 (831)
Q Consensus 735 t~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 809 (831)
|++|..+++..+++.+++|++..+.+. +.|.|+.+++.++++..+++ +|.+ ...|++.+++|.-|++++.++..
T Consensus 876 tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~i-lYvp~l~~iFq~~~l~~~ew~~vl~~s~~ 954 (972)
T KOG0202|consen 876 TMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLV-LYVPPLQRIFQTEPLSLAEWLLVLAISSP 954 (972)
T ss_pred eEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheE-EEechhhhhheecCCcHHHHHHHHHHhhh
Confidence 778888889999999999998754332 22447777887777665444 5654 34577888888877777899999
Q ss_pred HHHHHHHHHHHHH
Q 003313 810 FYILLDIIKFTVR 822 (831)
Q Consensus 810 ~~~~~e~~k~~~r 822 (831)
+++++|++|++.|
T Consensus 955 V~i~dEilK~~~R 967 (972)
T KOG0202|consen 955 VIIVDEILKFIAR 967 (972)
T ss_pred hhhHHHHHHHHHH
Confidence 9999999999999
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-129 Score=1042.11 Aligned_cols=826 Identities=73% Similarity=1.141 Sum_probs=782.1
Q ss_pred CCCcCCCCCCCCcccCCCCCccccCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHhHHHHH
Q 003313 1 MPEDLEKPLLDPENCNCGGIDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKPENKFLKFLSFMWNPLSWV 80 (831)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~ 80 (831)
|-||++. +++.+.++.|....+.|++.++|.++..|||++|+++|+++||+|++.+++.+.+.+|+..|++|+.|+
T Consensus 1 m~e~l~s----~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswV 76 (942)
T KOG0205|consen 1 MIEELDS----LEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWV 76 (942)
T ss_pred Ccccccc----hhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHH
Confidence 4566665 556666667788999999999999998899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCc
Q 003313 81 METAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGD 160 (831)
Q Consensus 81 l~i~ail~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GD 160 (831)
+..+|++...+..+++.+.+|.+...|.+++++|+.++|++|+++.++..+|++...++++|+|||+|.++++++|||||
T Consensus 77 MEaAAimA~~Lang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGD 156 (942)
T KOG0205|consen 77 MEAAAIMAIGLANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGD 156 (942)
T ss_pred HHHHHHHHHHHhcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCccccceEEEecCCeEEEcccccCCCccccccCCCeeeecceeee-----------ccchhhhHHHhhhccCc
Q 003313 161 IISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTEV 229 (831)
Q Consensus 161 iI~l~~G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~~ 229 (831)
|+.++.||+|||||++++|+.++||+|+|||||.|+.|++||.+|+||+|++ .+|.+||.+.++.++..
T Consensus 157 Ilsik~GdIiPaDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~ 236 (942)
T KOG0205|consen 157 ILSIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ 236 (942)
T ss_pred eeeeccCCEecCccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCC
Confidence 9999999999999999999999999999999999999999999999999988 79999999999999889
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHhhHHH----------------HHHHHHHHHHHhhhcCceEEc
Q 003313 230 VGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRIN----------------MLSVTLAIASYRLSQRGAITK 293 (831)
Q Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------------~l~~~l~~~~~~l~~~~ilvk 293 (831)
..++|+.++.++.++++.+++++++.+.++|..+++.+..+.. ++++++++|..|++++|.++|
T Consensus 237 ~GHFqkVLt~IGn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItk 316 (942)
T KOG0205|consen 237 VGHFQKVLTGIGNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 316 (942)
T ss_pred cccHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHH
Confidence 9999999999999999999999999988888877776665443 678899999999999999999
Q ss_pred cchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhcc
Q 003313 294 RMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANI 373 (831)
Q Consensus 294 ~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~ 373 (831)
++.++|.|+.++++|+|||||||.|+++|.+..++.+.++.++++++..|+.+++..+.|.+|.|++..+.+|.+.+.++
T Consensus 317 rmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~i 396 (942)
T KOG0205|consen 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGI 396 (942)
T ss_pred HHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCc
Confidence 99999999999999999999999999999997776788899999999999999999999999999999999999999999
Q ss_pred ceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCC
Q 003313 374 NEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDS 453 (831)
Q Consensus 374 ~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~ 453 (831)
+.++++||++..||.+..+.+++|++++++|||||.|++.|+.+.++++.+.+.+++++++|+|.+++|++..++...+.
T Consensus 397 kevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~ 476 (942)
T KOG0205|consen 397 KEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKES 476 (942)
T ss_pred eEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred CCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCc-CCCCCcccHH
Q 003313 454 PGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRD-KDENEALPVD 532 (831)
Q Consensus 454 ~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~-~~~~~~~~~~ 532 (831)
....+.|+|+.-+-||||.++.++|++....|.+|.|+|||....++..++++|+..|.++...+.|.+ -+.+...+.+
T Consensus 477 ~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~ 556 (942)
T KOG0205|consen 477 PGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVD 556 (942)
T ss_pred CCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHH
Confidence 888999999999999999999999999999999999999999999999999999999999977777765 4556778899
Q ss_pred HHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHH
Q 003313 533 ELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 533 ~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i 612 (831)
+.+++.+-|+.+.|+||+++|+.||++++.|+|+|||+||+|+||.||+|||+.+++|+|+.++|+|++.+.++.|..++
T Consensus 557 elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~av 636 (942)
T KOG0205|consen 557 ELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (942)
T ss_pred HHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHhhccchhccccCCCCCCCCCCccchHHHHHH
Q 003313 613 LTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAA 692 (831)
Q Consensus 613 ~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 692 (831)
..+|.+|+||+.+..|+++..+-+++.++...+.|.+.|+|+.++++.+++|.+.++++.|+.+|++.|.+|+.+.+|..
T Consensus 637 ltSraIfqrmknytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifat 716 (942)
T KOG0205|consen 637 LTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFAT 716 (942)
T ss_pred HHHHHHHHHHhhheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhhee
Confidence 99999999999999999999998778888888888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcCchHHHHHHHH
Q 003313 693 GIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTRSQSWSFLERPGALLMCAFV 772 (831)
Q Consensus 693 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~ 772 (831)
.+++|.++++.+..+||..+.+.+++..||......+..+...+.|+.+++..+..+|.+|++.|+|...|+++++++++
T Consensus 717 gvVlgtyma~~tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~ 796 (942)
T KOG0205|consen 717 GVVLGTYMAIMTVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFF 796 (942)
T ss_pred eeEehhHHHHHHHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHH
Confidence 99999999999999999999899999889987776777778888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccccccC
Q 003313 773 LAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVR-TLSREAWN 830 (831)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~k~~~r-~~~~~~w~ 830 (831)
.++++.+++..|.+|.+.+.....|.|...+|++++..+.+.++.|+..| -...++|+
T Consensus 797 ~aqliatliavya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~ 855 (942)
T KOG0205|consen 797 AAQLIATLIAVYANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWD 855 (942)
T ss_pred HHHHHHHHHHHHheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999 56668886
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-122 Score=1109.69 Aligned_cols=779 Identities=25% Similarity=0.388 Sum_probs=641.8
Q ss_pred cccCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCC-cHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCc
Q 003313 22 LARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKPE-NKFLKFLSFMWNPLSWVMETAALMAIALANGGGQGPD 100 (831)
Q Consensus 22 ~~~~~~~~~~~~l~~~~~GLs~~~~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~i~ail~~~~~~~~~~~~~ 100 (831)
.+..+.+++++.++++.+|||++|+++|+++||+|+++.+++ ++|..|+++|++|++++++++++++++++ +
T Consensus 49 ~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~-------~ 121 (902)
T PRK10517 49 AAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE-------D 121 (902)
T ss_pred HHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc-------c
Confidence 457889999999999999999999999999999999998765 57889999999999999999999999975 8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEEC------CEEEEEeCCCcCCCcEEEEcCCCccccce
Q 003313 101 WQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRD------GQWKEQDAAVLVPGDIISIKFGDVIPADA 174 (831)
Q Consensus 101 ~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rd------g~~~~i~~~~lv~GDiI~l~~G~~iPaDg 174 (831)
|.++++|+++++++.++++++|+|+++++++|+++.+++++|+|| |++++|++++|||||+|.|++||+|||||
T Consensus 122 ~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg 201 (902)
T PRK10517 122 LFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADL 201 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeE
Confidence 999999999999999999999999999999999999999999999 78999999999999999999999999999
Q ss_pred EEEecCCeEEEcccccCCCccccccCCC-------------eeeecceeee-----------ccchhhhHHHhhhcc-Cc
Q 003313 175 RLLEGDPLKIDQSELTGESLTVTKETGD-------------EVFSGLTCKH-----------VHSFFGKAADLVDST-EV 229 (831)
Q Consensus 175 ~ll~g~~~~Vdes~LTGEs~pv~K~~g~-------------~v~aGt~v~~-----------~~t~~g~~~~~~~~~-~~ 229 (831)
+|++|+++.||||+|||||.|+.|.+++ .+|+||.+.+ .+|++|++.++++++ ..
T Consensus 202 ~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~~ 281 (902)
T PRK10517 202 RILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSE 281 (902)
T ss_pred EEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCCC
Confidence 9999977999999999999999998874 7999999987 799999999999876 47
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHhhH---------------HH-HHHHHHHHHHHhhhcCceEEc
Q 003313 230 VGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDR---------------IN-MLSVTLAIASYRLSQRGAITK 293 (831)
Q Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------l~-~l~~~l~~~~~~l~~~~ilvk 293 (831)
++|+|+.++++++++..+.++.+.+.+++.+. ....+... ++ +++++++.|+.+|+|+|++||
T Consensus 282 ~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~-~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk 360 (902)
T PRK10517 282 PNAFQQGISRVSWLLIRFMLVMAPVVLLINGY-TKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVK 360 (902)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHH-hcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEe
Confidence 89999999999887544333322222222111 11122211 11 456778889999999999999
Q ss_pred cchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhcccc--CCChHHHHHHHHhCCh--HHH
Q 003313 294 RMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLE--NQDAIDAAIINMLADP--KEA 369 (831)
Q Consensus 294 ~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~--~~~~~~~ai~~~~~~~--~~~ 369 (831)
+++++|++|++|+||||||||||+|+|+|.++.. ..+.+.++++..++.++... .+||+|.|++.++... ...
T Consensus 361 ~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~---~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~ 437 (902)
T PRK10517 361 RLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTD---ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSL 437 (902)
T ss_pred cchhhhhccCCCEEEecCCCccccceEEEEEEec---CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhhh
Confidence 9999999999999999999999999999988641 22345567777776654432 3699999999887532 223
Q ss_pred hhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccC----------chhhHHHHHHHHHHHHhccCeee
Q 003313 370 RANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQE----------KEEIGGKVHEIINKLAEKGLRSL 439 (831)
Q Consensus 370 ~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l 439 (831)
...++.++++||++.+|+|++++++.++.+..++||+||.++++|.. +++.++++.+..++++++|+|++
T Consensus 438 ~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvl 517 (902)
T PRK10517 438 ASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVV 517 (902)
T ss_pred hhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEE
Confidence 45688899999999999999998876777789999999999999963 12345567777889999999999
Q ss_pred eeeeecCCCCCC---CCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCc
Q 003313 440 AVAVQEVPEMTE---DSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSS 516 (831)
Q Consensus 440 ~~a~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~ 516 (831)
++||++++..+. ...|+|++|+|+++|+||+||+++++|++|+++||+++|+||||+.||.++|+++||. +..
T Consensus 518 avA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~----~~~ 593 (902)
T PRK10517 518 AVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD----AGE 593 (902)
T ss_pred EEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----ccC
Confidence 999998764322 1247899999999999999999999999999999999999999999999999999995 346
Q ss_pred cccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhc
Q 003313 517 LLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAA 596 (831)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aa 596 (831)
++.|.+++.++++++++.+++.++|||++|+||.++|+.+|++|++|+|+|||+||+|||++||||||||+|+|+||++|
T Consensus 594 v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAkeaA 673 (902)
T PRK10517 594 VLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAA 673 (902)
T ss_pred ceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHHhC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCChHHHHHHHHhhccchhccccCCC
Q 003313 597 DIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWE-YDFPPFMVLIIAVLNDGTIITISKGRV 675 (831)
Q Consensus 597 divl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~l~~~~~ 675 (831)
|+|+++|||.+|++++++||++|+||+|++.|.++.|+..++.++++.++.+ +|++|+|++|+|+++|.+++++++|++
T Consensus 674 DiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~al~~d~~ 753 (902)
T PRK10517 674 DIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFDNV 753 (902)
T ss_pred CEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHhhcCCCC
Confidence 9999999999999999999999999999999999999987777666665566 699999999999999988899999999
Q ss_pred CCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHHHHHhhhhc
Q 003313 676 KSSL--RPDGWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTR 753 (831)
Q Consensus 676 ~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r 753 (831)
+++. +|++|+.+.+.+.++..|++.+++.+..|++++.. ++... .......++.+|+.+.++|.++++++|
T Consensus 754 ~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~F~~~~~~q~~~~~~~R 826 (902)
T PRK10517 754 DDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWV------FHANT-PETQTLFQSGWFVVGLLSQTLIVHMIR 826 (902)
T ss_pred ChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------ccccc-hhhHhHHHHHHHHHHHHHHHHHHHhhc
Confidence 8874 78888888888888888999888877666654321 11100 001123566779999999999999999
Q ss_pred cCCC-CCCcCchHHHHHHHHHHHHHHHHHHHhhh-cccccccchh--HHHHHHHHHHHHHHHHHHHHHHHHHH-hcc
Q 003313 754 SQSW-SFLERPGALLMCAFVLAQLVATLIAVYAH-ISFAYISGIG--WGWAGVIWLYSLVFYILLDIIKFTVR-TLS 825 (831)
Q Consensus 754 ~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~e~~k~~~r-~~~ 825 (831)
+++. +|.+.+.+..+++.++..++...++ |.+ ...+.+.+++ +..|+++++++.+ ++.|+.|.++. +++
T Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~~~~~~ 900 (902)
T PRK10517 827 TRRIPFIQSRAAWPLMIMTLIVMAVGIALP-FSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGFYSRRYG 900 (902)
T ss_pred cCCCCcccchHHHHHHHHHHHHHHHHHHhh-HHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHHHHHhhc
Confidence 9874 3444344333333333333333232 112 3456677777 4444444444433 66788877543 443
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-121 Score=1106.54 Aligned_cols=787 Identities=24% Similarity=0.374 Sum_probs=642.4
Q ss_pred ccccCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCC-CcHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC----C
Q 003313 21 DLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKP-ENKFLKFLSFMWNPLSWVMETAALMAIALANG----G 95 (831)
Q Consensus 21 ~~~~~~~~~~~~~l~~~~~GLs~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~i~ail~~~~~~~----~ 95 (831)
..|+.+.+++++.|+++.+|||++|+++|+++||+|+++.++ .++|+.|+++|++|+.++|+++++++++++.. .
T Consensus 26 ~~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~ 105 (903)
T PRK15122 26 REAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRR 105 (903)
T ss_pred HHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccC
Confidence 357889999999999999999999999999999999999766 56889999999999999999999999997521 1
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECC------EEEEEeCCCcCCCcEEEEcCCCc
Q 003313 96 GQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDG------QWKEQDAAVLVPGDIISIKFGDV 169 (831)
Q Consensus 96 ~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg------~~~~i~~~~lv~GDiI~l~~G~~ 169 (831)
+...+|.++++|+++++++..++++||++++++.++|+++.+++++|+||| ++++|++++|||||+|.|++||+
T Consensus 106 ~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~ 185 (903)
T PRK15122 106 GEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDM 185 (903)
T ss_pred CccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCE
Confidence 223479999999999999999999999999999999999999999999994 89999999999999999999999
Q ss_pred cccceEEEecCCeEEEcccccCCCccccccC-----------------------CCeeeecceeee-----------ccc
Q 003313 170 IPADARLLEGDPLKIDQSELTGESLTVTKET-----------------------GDEVFSGLTCKH-----------VHS 215 (831)
Q Consensus 170 iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~-----------------------g~~v~aGt~v~~-----------~~t 215 (831)
|||||+|++|+++.||||+|||||.|+.|.+ +|.+|+||.+.+ .+|
T Consensus 186 IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T 265 (903)
T PRK15122 186 IPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRT 265 (903)
T ss_pred EeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEecccc
Confidence 9999999999778999999999999999975 368999999987 799
Q ss_pred hhhhHHHhhhccCccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHhhH---------------HH-HHHHHHH
Q 003313 216 FFGKAADLVDSTEVVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDR---------------IN-MLSVTLA 279 (831)
Q Consensus 216 ~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------l~-~l~~~l~ 279 (831)
++|++.+++.+.+.++++++.++++++++..+..+.+.+.+++.+. ....+... ++ +++++++
T Consensus 266 ~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~-~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La 344 (903)
T PRK15122 266 YFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGF-TKGDWLEALLFALAVAVGLTPEMLPMIVSSNLA 344 (903)
T ss_pred HhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-ccCCHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 9999999998766778999999988876433322212111111111 11122211 11 4567788
Q ss_pred HHHHhhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccc--cCCChHHH
Q 003313 280 IASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRL--ENQDAIDA 357 (831)
Q Consensus 280 ~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~--~~~~~~~~ 357 (831)
.|+.+|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++. ..+.+.++++.+++.++.. ..+||+|.
T Consensus 345 ~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e~ 421 (903)
T PRK15122 345 KGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQ 421 (903)
T ss_pred HHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEc---CCCCChHHHHHHHHHhCCCCCCCCChHHH
Confidence 899999999999999999999999999999999999999999998652 2233456677766654322 24599999
Q ss_pred HHHHHhCChH--HHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccC----------chhhHHHHH
Q 003313 358 AIINMLADPK--EARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQE----------KEEIGGKVH 425 (831)
Q Consensus 358 ai~~~~~~~~--~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~----------~~~~~~~~~ 425 (831)
|++.++.... .....++.++.+||++.+|+|++++++.+|+++.++|||||.++++|.. +++.++++.
T Consensus 422 All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 501 (903)
T PRK15122 422 AVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLL 501 (903)
T ss_pred HHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHH
Confidence 9999875321 2334678899999999999999998876788899999999999999963 223356677
Q ss_pred HHHHHHHhccCeeeeeeeecCCCCC-----CCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHH
Q 003313 426 EIINKLAEKGLRSLAVAVQEVPEMT-----EDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAK 500 (831)
Q Consensus 426 ~~~~~~~~~G~r~l~~a~~~~~~~~-----~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~ 500 (831)
+..++++++|+|++++||++++..+ .+..|+|++|+|+++++||+|+|++++|++|+++||+++|+||||+.||.
T Consensus 502 ~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~ 581 (903)
T PRK15122 502 ALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTA 581 (903)
T ss_pred HHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence 7888999999999999999876432 12357899999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCC
Q 003313 501 ETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKAD 580 (831)
Q Consensus 501 ~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Ad 580 (831)
++|+++||.. ..++.|.+++.++++++.+.+++.++|||++|+||.++|+.+|++|++|+|+|||+||+|||++||
T Consensus 582 aIA~~lGI~~----~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~AD 657 (903)
T PRK15122 582 KICREVGLEP----GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDAD 657 (903)
T ss_pred HHHHHcCCCC----CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCC
Confidence 9999999953 468899999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCChHHHHHH
Q 003313 581 IGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWE-YDFPPFMVLII 659 (831)
Q Consensus 581 vgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~~~~~~~l~~ 659 (831)
||||||+|+|+||++||+|+++|||++|++++++||++|+||+|++.|.++.|+..++..+++.++.+ .|++|+|++|+
T Consensus 658 VGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~ 737 (903)
T PRK15122 658 VGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQ 737 (903)
T ss_pred EEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999977666555544444 78999999999
Q ss_pred HHhhccchhccccCCCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccCCCcHHHHHHHH
Q 003313 660 AVLNDGTIITISKGRVKSSL--RPDGWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAV 737 (831)
Q Consensus 660 ~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 737 (831)
|+++|.+++++++|++++.. +|++|+.+.+-+.++..|+..+++++..|++++.. +. .+. . ......+|++
T Consensus 738 nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~--~~~--~-~~~~~~~t~~ 810 (903)
T PRK15122 738 NLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWFV--FA--ANS--V-EMQALFQSGW 810 (903)
T ss_pred HHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--hc--cCc--H-hhhhhhHHHH
Confidence 99999888999999988775 67778776666666677887777777655543211 00 010 0 0011356888
Q ss_pred HHHHHHHHHHHhhhhccCCCCCCcCc-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHH
Q 003313 738 HLQVSIISQALIFVTRSQSWSFLERP-GALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYILLDI 816 (831)
Q Consensus 738 ~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 816 (831)
|++++++|+++++++|+++.++++++ .+..+++.++.+++.+.++....-..|.+.++++..|++++.++++++++.|+
T Consensus 811 f~~l~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~ 890 (903)
T PRK15122 811 FIEGLLSQTLVVHMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQG 890 (903)
T ss_pred HHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999874444444 22333332332222222221001235677888888888878888888888999
Q ss_pred HHHHHH
Q 003313 817 IKFTVR 822 (831)
Q Consensus 817 ~k~~~r 822 (831)
.|.+.+
T Consensus 891 ~k~~~~ 896 (903)
T PRK15122 891 MKRFYI 896 (903)
T ss_pred HHHHHh
Confidence 886543
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-121 Score=1093.98 Aligned_cols=723 Identities=54% Similarity=0.859 Sum_probs=632.2
Q ss_pred CCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHH
Q 003313 40 GLSSEDAEVRLKFFGSNKLEKKPENKFLKFLSFMWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISF 119 (831)
Q Consensus 40 GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~i~ail~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~ 119 (831)
|||++|+++|+++||+|+++.++++.|+.|+++|++|+.++++++++++++++ +|.++++++++++++..+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999888888999999999999999999999999986 89999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEEecCCeEEEcccccCCCcccccc
Q 003313 120 IEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKE 199 (831)
Q Consensus 120 ~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~ 199 (831)
++|+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999966999999999999999999
Q ss_pred CCCeeeecceeee-----------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhH
Q 003313 200 TGDEVFSGLTCKH-----------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLY 267 (831)
Q Consensus 200 ~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (831)
+||.+|+||.+.+ .+|++|++.+++++++ .++++|+.+++++++++.++++.+++.+++++......+
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999987 7999999999998876 678999999999988655444433333333222122222
Q ss_pred hhHHH----------------HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecC
Q 003313 268 RDRIN----------------MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFN 331 (831)
Q Consensus 268 ~~~l~----------------~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~ 331 (831)
...+. +++++++.+++||+|+|+++|+++++|+||++|++|||||||||+|+|+|.+++. ..
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FF 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEe--cC
Confidence 22211 4667788899999999999999999999999999999999999999999999764 22
Q ss_pred CCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhccceeEEecCCCCCceEEEEEEcCC-CcEEEEEccchHHH
Q 003313 332 RDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTDSE-GNWYRASKGAPEQI 410 (831)
Q Consensus 332 ~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~-g~~~~~~kGa~e~i 410 (831)
.+.++++++.+++.++...++||+|.|+++++.+....+..++.++.+||++.+|+|++++.+.+ |+.+.++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 23567788888887765555699999999987655444567888999999999999999887654 77788999999999
Q ss_pred hhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEE
Q 003313 411 LNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKM 490 (831)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m 490 (831)
+++|+...+.++++.+.+++++++|+|++++|+++ .|++|+|+|+++|+||+|||++++|++||++||+++|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998766677888889999999999999999973 2678999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHhCCCCCCCCC-ccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCC
Q 003313 491 ITGDHLAIAKETGRRLGIGTNMYPS-SLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDG 569 (831)
Q Consensus 491 ~TGD~~~~a~~ia~~~gi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG 569 (831)
+|||++.+|.++|+++||..+..+. ....+.+.+.++++++++.++++++|||++|+||.++|+.+|++|++|+|+|||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDG 543 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDG 543 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 9999999999999999997543322 233455556778889999999999999999999999999999999999999999
Q ss_pred ccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 003313 570 VNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWEY 649 (831)
Q Consensus 570 ~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~ 649 (831)
+||+|||++||||||||+|+|+||++||+|+++|||++|++++++||++|+|++|++.|.++.|+..++.+++..+.+++
T Consensus 544 vNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~ 623 (755)
T TIGR01647 544 VNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNF 623 (755)
T ss_pred cccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999877766666666677
Q ss_pred CCChHHHHHHHHhhccchhccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccCCCc
Q 003313 650 DFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSN 729 (831)
Q Consensus 650 ~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (831)
+++|+|++|+|+++|++++++++|+++|+++|++|...+++..++..|++.++.++.+|++.+...++...++ ....
T Consensus 624 ~l~~~~il~~~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 700 (755)
T TIGR01647 624 YFPPIMVVIIAILNDGTIMTIAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFG---LQLL 700 (755)
T ss_pred chhHHHHHHHHHHHhHhHhhccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhccc---cccc
Confidence 8999999999999999899999999999999999999999999999999999999887777664221111111 1113
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcCchHHHHHHHHHHHHHHHHHH
Q 003313 730 TEEISSAVHLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVLAQLVATLIA 782 (831)
Q Consensus 730 ~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 782 (831)
..+++|++|+.++++|+++++.+|+++.+|++.|++++++++++..++.+++.
T Consensus 701 ~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ 753 (755)
T TIGR01647 701 HGNLQSLIYLQVSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIATFIA 753 (755)
T ss_pred HhhhHHHHHHHHHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHHHHh
Confidence 45789999999999999999999999988899999999999888877766654
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-121 Score=1118.49 Aligned_cols=792 Identities=25% Similarity=0.362 Sum_probs=641.6
Q ss_pred CccccCCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCccCCCC-CcHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCC
Q 003313 20 IDLARLPLDEVFGQLGTT-RQGLSSEDAEVRLKFFGSNKLEKKP-ENKFLKFLSFMWNPLSWVMETAALMAIALANGGGQ 97 (831)
Q Consensus 20 ~~~~~~~~~~~~~~l~~~-~~GLs~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~i~ail~~~~~~~~~~ 97 (831)
.|||..+++|+++.|+++ .+|||++|+++|+++||+|+++.++ .+.|+.|+++|++|+.++|+++++++++++
T Consensus 5 ~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~----- 79 (1053)
T TIGR01523 5 NAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH----- 79 (1053)
T ss_pred CchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh-----
Confidence 578999999999999998 6899999999999999999999875 678999999999999999999999999986
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEE
Q 003313 98 GPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLL 177 (831)
Q Consensus 98 ~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll 177 (831)
+|.++++|++++++++.++++||+|+++++++|+++.+++++|+|||++++|+++||||||||.|++||+|||||+|+
T Consensus 80 --~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi 157 (1053)
T TIGR01523 80 --DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLI 157 (1053)
T ss_pred --hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEE
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCeEEEcccccCCCccccccCC---------------Ceeeecceeee-----------ccchhhhHHHhhhccC---
Q 003313 178 EGDPLKIDQSELTGESLTVTKETG---------------DEVFSGLTCKH-----------VHSFFGKAADLVDSTE--- 228 (831)
Q Consensus 178 ~g~~~~Vdes~LTGEs~pv~K~~g---------------~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~--- 228 (831)
+++++.||||+|||||.||.|.+. +++|+||.|.+ .+|++|++++++.+.+
T Consensus 158 ~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~ 237 (1053)
T TIGR01523 158 ETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLF 237 (1053)
T ss_pred EeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhcc
Confidence 998899999999999999999642 57899999987 7999999999885432
Q ss_pred ---------------------------------ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc------------
Q 003313 229 ---------------------------------VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQ------------ 263 (831)
Q Consensus 229 ---------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 263 (831)
.++|+|+.++++++++..+.++.+++.++......
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~av~l~ 317 (1053)
T TIGR01523 238 QRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFDVDKEVAIYAICLA 317 (1053)
T ss_pred ccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 14899999999998744333222222111111000
Q ss_pred hhhHhhHHH-HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeee---c--C---CCC
Q 003313 264 HRLYRDRIN-MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEV---F--N---RDM 334 (831)
Q Consensus 264 ~~~~~~~l~-~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~---~--~---~~~ 334 (831)
....+++++ +++++++++++||+++|++||+++++|+||++++||+|||||||+|+|+|++++... + . .++
T Consensus 318 Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~ 397 (1053)
T TIGR01523 318 ISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAF 397 (1053)
T ss_pred HHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCC
Confidence 001112222 677889999999999999999999999999999999999999999999999876421 0 0 000
Q ss_pred ---------------------------------------C---------hHHHHHHHHHhccc------------cCCCh
Q 003313 335 ---------------------------------------D---------KDILVLLAARASRL------------ENQDA 354 (831)
Q Consensus 335 ---------------------------------------~---------~~~~l~~a~~~~~~------------~~~~~ 354 (831)
+ ...++..++.|+.. ..+||
T Consensus 398 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~Gdp 477 (1053)
T TIGR01523 398 NPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDP 477 (1053)
T ss_pred CCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCc
Confidence 0 01345555555421 12599
Q ss_pred HHHHHHHHhCCh----------HHH-------------------hhccceeEEecCCCCCceEEEEEEcCCC-cEEEEEc
Q 003313 355 IDAAIINMLADP----------KEA-------------------RANINEVHFLPFNPVDKRTAITYTDSEG-NWYRASK 404 (831)
Q Consensus 355 ~~~ai~~~~~~~----------~~~-------------------~~~~~~l~~~~f~s~~k~~sv~v~~~~g-~~~~~~k 404 (831)
+|.|++.++... .+. ...|++++.+||+|+||||++++++.++ ++++++|
T Consensus 478 tE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~K 557 (1053)
T TIGR01523 478 TEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAK 557 (1053)
T ss_pred cHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEe
Confidence 999999886311 011 2347789999999999999999986544 4688999
Q ss_pred cchHHHhhhccC------------chhhHHHHHHHHHHHHhccCeeeeeeeecCCCCC------------CCCCCCCcee
Q 003313 405 GAPEQILNMCQE------------KEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMT------------EDSPGGPRSF 460 (831)
Q Consensus 405 Ga~e~i~~~~~~------------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~------------~~~~e~~l~~ 460 (831)
||||.|+++|+. +++.++++.+.+++|+++|+||+++||+.++..+ ++..|+||+|
T Consensus 558 GApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~ 637 (1053)
T TIGR01523 558 GAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEF 637 (1053)
T ss_pred CChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhccCCEE
Confidence 999999999963 1234677888899999999999999999876431 2356899999
Q ss_pred eeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCC--------CCCccccCCcCCCCCcccHH
Q 003313 461 CGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNM--------YPSSLLLGRDKDENEALPVD 532 (831)
Q Consensus 461 lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~--------~~~~~~~~~~~~~~~~~~~~ 532 (831)
+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||.... ....++.|.+++.+++++++
T Consensus 638 ~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~ 717 (1053)
T TIGR01523 638 LGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVD 717 (1053)
T ss_pred EEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHH
Confidence 9999999999999999999999999999999999999999999999996421 12357888899988999999
Q ss_pred HHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEec-CchHHHhhhcCEEEeCCChhHHHHH
Q 003313 533 ELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-GATEAARGAADIVLTEPGLSVICSA 611 (831)
Q Consensus 533 ~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~-~~~~~a~~aadivl~~~~~~~i~~~ 611 (831)
+..++..||||++|+||.++|+.+|++|++|+|+|||+||+|||++|||||||| +|+|+|+++||+++++|||++|+++
T Consensus 718 ~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~ 797 (1053)
T TIGR01523 718 DLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNA 797 (1053)
T ss_pred HHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----c-cCCCChHHHHHHHHhhccc-hhccccCCCCCC-----C
Q 003313 612 VLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALI-----W-EYDFPPFMVLIIAVLNDGT-IITISKGRVKSS-----L 679 (831)
Q Consensus 612 i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~-----~-~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~-----~ 679 (831)
+++||++|+|++|++.|.+++|+..++.++++.++ . ++|++|+|++|+|+++|.+ +++++++++++. |
T Consensus 798 i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~P 877 (1053)
T TIGR01523 798 IEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLP 877 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCC
Confidence 99999999999999999999999776666655544 2 3689999999999999965 699999887664 2
Q ss_pred CCC--ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hccc----cccccccCCCcHHHHHHHHHHHHHHHHHHHhh
Q 003313 680 RPD--GWKLNEIFAAGIVIGNYLALVTILFYWVVVHT---DFFE----THFHVRSLSSNTEEISSAVHLQVSIISQALIF 750 (831)
Q Consensus 680 ~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 750 (831)
+++ +...+.++..++..|++++++++..|++.+.. +... ..++.. .....+++|++|.+++++|+++++
T Consensus 878 r~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~t~~f~~l~~~~~~~~~ 955 (1053)
T TIGR01523 878 HDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAG--CNDVFKARSAAFATMTFCALILAV 955 (1053)
T ss_pred CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccccccccc--ccchhhhHHHHHHHHHHHHHHHHH
Confidence 221 22235666677888999998888776644321 0000 001100 012456789999999999999999
Q ss_pred hhccCCCCCCc------------------CchHHHHHHHHHHHHHHHHHHHhhh-c--ccccccchhHHHHHHHHHHHHH
Q 003313 751 VTRSQSWSFLE------------------RPGALLMCAFVLAQLVATLIAVYAH-I--SFAYISGIGWGWAGVIWLYSLV 809 (831)
Q Consensus 751 ~~r~~~~~~~~------------------~~~~~l~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~ 809 (831)
++|+.+.+.+. ..|.++++++++++++..++ +|.+ + ..|.+.|++|.|++ +++++++
T Consensus 956 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~-~~~p~~~~~~f~~~~l~~~w~~-~~~~~~~ 1033 (1053)
T TIGR01523 956 EVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPT-IYIPVINDDVFKHKPIGAEWGL-AAAATIA 1033 (1053)
T ss_pred HHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHH-HhhhhhhhhhhccCCcchHHHH-HHHHHHH
Confidence 99997633211 13456666776666554433 4544 2 26778888886554 5788888
Q ss_pred HHHHHHHHHHHHH
Q 003313 810 FYILLDIIKFTVR 822 (831)
Q Consensus 810 ~~~~~e~~k~~~r 822 (831)
.++..|++|++.|
T Consensus 1034 ~~~~~e~~K~~~r 1046 (1053)
T TIGR01523 1034 FFFGAEIWKCGKR 1046 (1053)
T ss_pred HHHHHHHHHHHHH
Confidence 8999999999988
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-120 Score=1098.66 Aligned_cols=775 Identities=23% Similarity=0.360 Sum_probs=636.1
Q ss_pred ccccCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCC-CcHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCC
Q 003313 21 DLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKP-ENKFLKFLSFMWNPLSWVMETAALMAIALANGGGQGP 99 (831)
Q Consensus 21 ~~~~~~~~~~~~~l~~~~~GLs~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~i~ail~~~~~~~~~~~~ 99 (831)
+.|.++.+++++.|+++.+|||++|+++|+++||+|+++.++ .++|+.|+++|++|+.++++++++++++.+
T Consensus 14 ~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~------- 86 (867)
T TIGR01524 14 KESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD------- 86 (867)
T ss_pred HHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh-------
Confidence 457889999999999998999999999999999999998876 468899999999999999999999999875
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEE------CCEEEEEeCCCcCCCcEEEEcCCCccccc
Q 003313 100 DWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLR------DGQWKEQDAAVLVPGDIISIKFGDVIPAD 173 (831)
Q Consensus 100 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r------dg~~~~i~~~~lv~GDiI~l~~G~~iPaD 173 (831)
+|.++++|+++++++..+++++|+|++++.++|+++.+++++|+| ||++++|+++||||||+|.+++||+||||
T Consensus 87 ~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaD 166 (867)
T TIGR01524 87 DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPAD 166 (867)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEccc
Confidence 899999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred eEEEecCCeEEEcccccCCCccccccCCC-------------eeeecceeee-----------ccchhhhHHHhhhccCc
Q 003313 174 ARLLEGDPLKIDQSELTGESLTVTKETGD-------------EVFSGLTCKH-----------VHSFFGKAADLVDSTEV 229 (831)
Q Consensus 174 g~ll~g~~~~Vdes~LTGEs~pv~K~~g~-------------~v~aGt~v~~-----------~~t~~g~~~~~~~~~~~ 229 (831)
|+|++|+++.||||+|||||.|+.|.+|+ .+|+||.+.+ .+|++|++.+++.+.+.
T Consensus 167 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~ 246 (867)
T TIGR01524 167 ARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRG 246 (867)
T ss_pred EEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCCC
Confidence 99999977899999999999999998874 6999999887 79999999999988667
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHhhH----H-----------H-HHHHHHHHHHHhhhcCceEEc
Q 003313 230 VGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDR----I-----------N-MLSVTLAIASYRLSQRGAITK 293 (831)
Q Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l-----------~-~l~~~l~~~~~~l~~~~ilvk 293 (831)
++|+|+.++++++++..+.++.+++.+++.+. ....+... + + +++++++.++.||+|+|+++|
T Consensus 247 ~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk 325 (867)
T TIGR01524 247 QTAFDKGVKSVSKLLIRFMLVMVPVVLMINGL-MKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVK 325 (867)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHheehHHH-hcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEc
Confidence 89999999999987544433322222222111 11122211 1 1 456778889999999999999
Q ss_pred cchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccc--cCCChHHHHHHHHhCCh--HHH
Q 003313 294 RMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRL--ENQDAIDAAIINMLADP--KEA 369 (831)
Q Consensus 294 ~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~--~~~~~~~~ai~~~~~~~--~~~ 369 (831)
+++++|+||++++||||||||||+|+|+|.++.. ..+.+.++++.++++++.. ..+||+|.|++.++... ...
T Consensus 326 ~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~---~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~ 402 (867)
T TIGR01524 326 ELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQT 402 (867)
T ss_pred cchhhhhccCccEEEecCCCccccCeEEEEEEec---CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhH
Confidence 9999999999999999999999999999998642 2234566677777655432 23599999999887532 223
Q ss_pred hhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccC----------chhhHHHHHHHHHHHHhccCeee
Q 003313 370 RANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQE----------KEEIGGKVHEIINKLAEKGLRSL 439 (831)
Q Consensus 370 ~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l 439 (831)
+..++.++.+||+|++|+|++++++.++.++.++||+||.++++|+. +++.++++.+.+++++++|+|++
T Consensus 403 ~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvl 482 (867)
T TIGR01524 403 ASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVI 482 (867)
T ss_pred hhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEE
Confidence 45678899999999999999998766666789999999999999963 12345677888899999999999
Q ss_pred eeeeecCCCCCC---CCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCc
Q 003313 440 AVAVQEVPEMTE---DSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSS 516 (831)
Q Consensus 440 ~~a~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~ 516 (831)
++||++++..+. ++.|++|+|+|+++++||+|+|++++|++|+++||+++|+|||++.||.++|+++||.. ..
T Consensus 483 avA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~~ 558 (867)
T TIGR01524 483 AVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----ND 558 (867)
T ss_pred EEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----CC
Confidence 999998765432 12478999999999999999999999999999999999999999999999999999963 46
Q ss_pred cccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhc
Q 003313 517 LLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAA 596 (831)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aa 596 (831)
++.|.+++.++++++.+.++++++|||++|+||.++|+.+|++|++|+|+|||+||+|||++||||||||+|+|+||++|
T Consensus 559 v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~aA 638 (867)
T TIGR01524 559 FLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEAS 638 (867)
T ss_pred eeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHhC
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCChHHHHHHHHhhccchhccccCCC
Q 003313 597 DIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWE-YDFPPFMVLIIAVLNDGTIITISKGRV 675 (831)
Q Consensus 597 divl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~l~~~~~ 675 (831)
|+|+++|||++|++++++||++|+||+|++.|.++.|+..++.++++.++.+ +|++|+|++|+|+++|++++++++|++
T Consensus 639 DiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d~~~~al~~~~~ 718 (867)
T TIGR01524 639 DIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLPWDKM 718 (867)
T ss_pred CEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 9999999999999999999999999999999999999977766665555555 799999999999999987899999998
Q ss_pred CCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHHHHHhhhhc
Q 003313 676 KSSL--RPDGWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTR 753 (831)
Q Consensus 676 ~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r 753 (831)
+++. +|++|+.+.+.+.++..|++.+++.+..|++++...... + . ......+|..|+.++++|+++++++|
T Consensus 719 ~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~---~-~~~~~~~t~~f~~~~~~~~~~~~~~R 791 (867)
T TIGR01524 719 DREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVFSAN---T---V-EEQALFQSGWFVVGLLSQTLVVHMIR 791 (867)
T ss_pred ChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---c---h-hhhhHHHHHHHHHHHHHHHHHHHhhC
Confidence 8874 677787777887888889988887776665543211000 0 0 01234578899999999999999999
Q ss_pred cCCCCCCcCchHHHHHHHHHHHHHHHHHHHhhh----cccccccchhHH--HHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 754 SQSWSFLERPGALLMCAFVLAQLVATLIAVYAH----ISFAYISGIGWG--WAGVIWLYSLVFYILLDIIKFTVR 822 (831)
Q Consensus 754 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~e~~k~~~r 822 (831)
+++..+++|+. ++.++++.+++..+ ..|.+ ...|.+.++|+. .|++++.+++ .++.|+.|.+..
T Consensus 792 ~~~~~~~~n~~--~~~~~~~~~~~~~~-~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~--~~~~e~~k~~~~ 861 (867)
T TIGR01524 792 TEKIPFIQSRA--AAPVMIATLLVMAL-GIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGY--MATMQLVKTFYI 861 (867)
T ss_pred cCCCCcCcchH--HHHHHHHHHHHHHH-HHHhchhhhhhhhccccCCccHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 98744444542 23233222222211 12222 134566655433 3333333433 366788887644
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-119 Score=1085.77 Aligned_cols=783 Identities=30% Similarity=0.438 Sum_probs=638.7
Q ss_pred ccCCCCCccccCCHH--HHHHHhCCC-CCCCCHHHHHHHHHhcCCCccCCCC-CcHHHHHHHHHHhHHHHHHHHHHHHHH
Q 003313 14 NCNCGGIDLARLPLD--EVFGQLGTT-RQGLSSEDAEVRLKFFGSNKLEKKP-ENKFLKFLSFMWNPLSWVMETAALMAI 89 (831)
Q Consensus 14 ~~~~~~~~~~~~~~~--~~~~~l~~~-~~GLs~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~i~ail~~ 89 (831)
........||..+.+ ++...+.++ .+||+++|+.+|+++||+|+++..+ .+.|..|+++|++|+.++|++++++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~ 94 (917)
T COG0474 15 STPVTSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSA 94 (917)
T ss_pred cccCCcccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555678888888 999999887 7799999999999999999999654 688999999999999999999999999
Q ss_pred HHhcCCCCCCch----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEc
Q 003313 90 ALANGGGQGPDW----QDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIK 165 (831)
Q Consensus 90 ~~~~~~~~~~~~----~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~ 165 (831)
+++ .| .++..|.++++++.+++++||+|+++++++++++.+++++|+|||++++|+++||||||||.++
T Consensus 95 ~~~-------~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~ 167 (917)
T COG0474 95 FVG-------DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLE 167 (917)
T ss_pred Hhh-------cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEEC
Confidence 986 55 5566788899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccceEEEecCCeEEEcccccCCCccccccC--------------CCeeeecceeee-----------ccchhhhH
Q 003313 166 FGDVIPADARLLEGDPLKIDQSELTGESLTVTKET--------------GDEVFSGLTCKH-----------VHSFFGKA 220 (831)
Q Consensus 166 ~G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~--------------g~~v~aGt~v~~-----------~~t~~g~~ 220 (831)
+||+||||++|+++++++||||+|||||.|+.|.+ .+++|+||.+.+ .+|++|++
T Consensus 168 ~gd~vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~i 247 (917)
T COG0474 168 AGDVVPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKI 247 (917)
T ss_pred CCCccccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHH
Confidence 99999999999999888999999999999999963 478999999987 79999999
Q ss_pred HHhhhcc-CccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHhh----H-----------HH-HHHHHHHHHHH
Q 003313 221 ADLVDST-EVVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRD----R-----------IN-MLSVTLAIASY 283 (831)
Q Consensus 221 ~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----------l~-~l~~~l~~~~~ 283 (831)
++++... +..+|+++.+++++++++.+.++..++.++..+......+.. + ++ ++++++++++.
T Consensus 248 a~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~ 327 (917)
T COG0474 248 ARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQ 327 (917)
T ss_pred HHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Confidence 9999988 689999999999998865554443333333332221111221 1 11 67788999999
Q ss_pred hhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCC------h---HHHHHHHHHhcc-cc---
Q 003313 284 RLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMD------K---DILVLLAARASR-LE--- 350 (831)
Q Consensus 284 ~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~------~---~~~l~~a~~~~~-~~--- 350 (831)
+|++++++||+++++|+||++++||+|||||||+|+|+|.+++......+.+ . ..++..+++|+. ..
T Consensus 328 ~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~ 407 (917)
T COG0474 328 RMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKN 407 (917)
T ss_pred HHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCccccccc
Confidence 9999999999999999999999999999999999999999998752011111 0 123444444442 22
Q ss_pred ----CCChHHHHHHHHhCC------hHHHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccC----
Q 003313 351 ----NQDAIDAAIINMLAD------PKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQE---- 416 (831)
Q Consensus 351 ----~~~~~~~ai~~~~~~------~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~---- 416 (831)
.+||+|.|+++++.+ .......+++++++||+|+||||++++++.+|+++.++|||||.|+++|+.
T Consensus 408 ~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~ 487 (917)
T COG0474 408 GWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGEL 487 (917)
T ss_pred CceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcc
Confidence 369999999998753 334556667899999999999999999977787899999999999999973
Q ss_pred ---chhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCC----CCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEE
Q 003313 417 ---KEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTE----DSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVK 489 (831)
Q Consensus 417 ---~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~----~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~ 489 (831)
.++.++.+.+..++|+++|+|++++|||..+..+. ++.|+||+|+|+++|+||||++++++|+.|+++||+++
T Consensus 488 ~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~ 567 (917)
T COG0474 488 EPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVW 567 (917)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEE
Confidence 34567889999999999999999999997765443 57899999999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCC
Q 003313 490 MITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDG 569 (831)
Q Consensus 490 m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG 569 (831)
|+||||+.||++||++||+..+.....++.|.+++.+.++++.+.+++++||||++|+||.++|+.+|++|++|+|+|||
T Consensus 568 MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDG 647 (917)
T COG0474 568 MITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDG 647 (917)
T ss_pred EECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 99999999999999999987643224488899999999999999999999999999999999999999999999999999
Q ss_pred ccChhhhccCCeeEEec-CchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc
Q 003313 570 VNDAPALKKADIGIAVA-GATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLA-LIW 647 (831)
Q Consensus 570 ~ND~~al~~AdvgIa~~-~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~-~~~ 647 (831)
+||+||||+|||||||| +|+|+||++||+++.+++|..|..++++||++|.|++|++.|.+++|+..++.++++. +..
T Consensus 648 vNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~ 727 (917)
T COG0474 648 VNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNL 727 (917)
T ss_pred chhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999998 7999999999999999999999999999999999999999999999998665555544 444
Q ss_pred c-CCCChHHHHHHHHhhccc-hhccccCCCCC------CCCCCc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 003313 648 E-YDFPPFMVLIIAVLNDGT-IITISKGRVKS------SLRPDG--WKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFF 717 (831)
Q Consensus 648 ~-~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~------~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 717 (831)
+ +|+.|+|++|+|+++|.+ +++++.+++++ +++|.+ |..+.++++.+..|...+++.++.|.+++....
T Consensus 728 ~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~- 806 (917)
T COG0474 728 FFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFI- 806 (917)
T ss_pred ccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 4 689999999999999996 68888775322 223444 555666666777788888888777666653211
Q ss_pred ccccccccCCCcHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcC---chHHHHHHHHHHHHHHHHHHHhhh-c-ccccc
Q 003313 718 ETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTRSQSWSFLER---PGALLMCAFVLAQLVATLIAVYAH-I-SFAYI 792 (831)
Q Consensus 718 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~-~-~~~~~ 792 (831)
....+.. ......+|++|+.++++++++.+.+|+.+.++++. .++.++.++++..++..+...+.. . ..+..
T Consensus 807 ~~~~~~~---~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~ 883 (917)
T COG0474 807 ANTLGLD---LFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQP 883 (917)
T ss_pred ccccchh---hHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccC
Confidence 1111110 01566789999999999999999999986555443 355555555555554443322222 2 34555
Q ss_pred cchhHHHHHHHHHHH
Q 003313 793 SGIGWGWAGVIWLYS 807 (831)
Q Consensus 793 ~~~~~~~~~~~~~~~ 807 (831)
.++++.-|++...++
T Consensus 884 ~~~~~~~~~~~~~~~ 898 (917)
T COG0474 884 TPLSLFEWLIAIAVA 898 (917)
T ss_pred CCCcHHHHHHHHHHH
Confidence 555544344334444
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-117 Score=1081.50 Aligned_cols=806 Identities=24% Similarity=0.348 Sum_probs=645.7
Q ss_pred CCCCccccCCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCccCCCC-CcHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC
Q 003313 17 CGGIDLARLPLDEVFGQLGTT-RQGLSSEDAEVRLKFFGSNKLEKKP-ENKFLKFLSFMWNPLSWVMETAALMAIALANG 94 (831)
Q Consensus 17 ~~~~~~~~~~~~~~~~~l~~~-~~GLs~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~i~ail~~~~~~~ 94 (831)
.-+.+||..|.+++.+.|+++ .+|||++|+++|+++||+|+++.++ .+.|+.|+++|++|+.++++++++++++....
T Consensus 12 ~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~ 91 (997)
T TIGR01106 12 EVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGI 91 (997)
T ss_pred hccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 346789999999999999998 6799999999999999999998755 56889999999999999999999998875321
Q ss_pred ------CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCC
Q 003313 95 ------GGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGD 168 (831)
Q Consensus 95 ------~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~ 168 (831)
.....+|++++++++++++++.+++++++|+++.+++++++.+++++|+|||++++|+++||||||+|.|++||
T Consensus 92 ~~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd 171 (997)
T TIGR01106 92 QASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGD 171 (997)
T ss_pred hhccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCC
Confidence 11234789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceEEEecCCeEEEcccccCCCccccccCCC----------eeeecceeee-----------ccchhhhHHHhhhcc
Q 003313 169 VIPADARLLEGDPLKIDQSELTGESLTVTKETGD----------EVFSGLTCKH-----------VHSFFGKAADLVDST 227 (831)
Q Consensus 169 ~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g~----------~v~aGt~v~~-----------~~t~~g~~~~~~~~~ 227 (831)
+|||||++++|+.+.||||+|||||.|+.|.+++ .+|+||.+.+ .+|.+|++.+++++.
T Consensus 172 ~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 251 (997)
T TIGR01106 172 RIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGL 251 (997)
T ss_pred EEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhc
Confidence 9999999999977999999999999999998864 6999998876 789999999988766
Q ss_pred C-ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHhhHH---------------H-HHHHHHHHHHHhhhcCce
Q 003313 228 E-VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRI---------------N-MLSVTLAIASYRLSQRGA 290 (831)
Q Consensus 228 ~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---------------~-~l~~~l~~~~~~l~~~~i 290 (831)
+ +++|+++.++++++++..+.++..++.+++.+ .....+...+ . .++++++.++.+|+++|+
T Consensus 252 ~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~i 330 (997)
T TIGR01106 252 ENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSL-ILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNC 330 (997)
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCc
Confidence 4 67999999999888744433222222222211 1112222111 1 456678889999999999
Q ss_pred EEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeec----CC-------CCC-----hHHHHHHHHHhccc-----
Q 003313 291 ITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVF----NR-------DMD-----KDILVLLAARASRL----- 349 (831)
Q Consensus 291 lvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~----~~-------~~~-----~~~~l~~a~~~~~~----- 349 (831)
++|+++++|+||++++||||||||||+|+|+|.+++++.. .. ..+ .+.++..++.|+..
T Consensus 331 lvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~ 410 (997)
T TIGR01106 331 LVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAG 410 (997)
T ss_pred EecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccc
Confidence 9999999999999999999999999999999999874211 00 011 12455556655321
Q ss_pred ----------cCCChHHHHHHHHhC----ChHHHhhccceeEEecCCCCCceEEEEEEcC---CCcEEEEEccchHHHhh
Q 003313 350 ----------ENQDAIDAAIINMLA----DPKEARANINEVHFLPFNPVDKRTAITYTDS---EGNWYRASKGAPEQILN 412 (831)
Q Consensus 350 ----------~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~---~g~~~~~~kGa~e~i~~ 412 (831)
..+||+|.|+++++. +..+.+..++.++.+||+|+||||++++... ++++++++|||||.|++
T Consensus 411 ~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~ 490 (997)
T TIGR01106 411 QENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILE 490 (997)
T ss_pred cCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHH
Confidence 125899999998864 2344567788999999999999999887632 24678999999999999
Q ss_pred hccC----------chhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCC--------C---CCCCCceeeeeccccCCCC
Q 003313 413 MCQE----------KEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTE--------D---SPGGPRSFCGLLPLFDPPR 471 (831)
Q Consensus 413 ~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~--------~---~~e~~l~~lG~i~~~D~lr 471 (831)
+|+. +++.++.+.+.+++++++|+||+++||+.+++++. + ..|+||+|+|+++++||+|
T Consensus 491 ~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr 570 (997)
T TIGR01106 491 RCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPR 570 (997)
T ss_pred HhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCCh
Confidence 9962 23456778888999999999999999998764311 1 2388999999999999999
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC----------------------CCccccCCcCCCCCcc
Q 003313 472 HDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY----------------------PSSLLLGRDKDENEAL 529 (831)
Q Consensus 472 ~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~----------------------~~~~~~~~~~~~~~~~ 529 (831)
++++++|++|+++||+++|+|||++.+|.++|+++|+..+.. ...++.|.+++.++++
T Consensus 571 ~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~ 650 (997)
T TIGR01106 571 AAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSE 650 (997)
T ss_pred HHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHH
Confidence 999999999999999999999999999999999999964311 0247888888888899
Q ss_pred cHHHHHHhcC--cEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEec-CchHHHhhhcCEEEeCCChh
Q 003313 530 PVDELIEKAD--GFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-GATEAARGAADIVLTEPGLS 606 (831)
Q Consensus 530 ~~~~~~~~~~--v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~-~~~~~a~~aadivl~~~~~~ 606 (831)
++++.++++. ||||++|+||.++|+.+|+.|++|+|+|||+||+||||+|||||||| +|+|+|+++||+++++|||+
T Consensus 651 el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~ 730 (997)
T TIGR01106 651 QLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFA 730 (997)
T ss_pred HHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHH
Confidence 9999998875 99999999999999999999999999999999999999999999999 79999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCCCChHHHHHHHHhhccc-hhccccCCCCCC---CCC
Q 003313 607 VICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLAL-IWEYDFPPFMVLIIAVLNDGT-IITISKGRVKSS---LRP 681 (831)
Q Consensus 607 ~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~---~~~ 681 (831)
+|++++++||++|+|+++++.|.++.|+..++..+++.+ ..+.|++|+|++|+|+++|.+ +++++++++++. ++|
T Consensus 731 ~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P 810 (997)
T TIGR01106 731 SIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQP 810 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCC
Confidence 999999999999999999999999999977666655544 456789999999999999985 799999887764 233
Q ss_pred Cccc-----hHH-HHHHHHHHHHHHHHHHHHHHHHHHhh-hcccc-cccc---------ccCCCc-------------HH
Q 003313 682 DGWK-----LNE-IFAAGIVIGNYLALVTILFYWVVVHT-DFFET-HFHV---------RSLSSN-------------TE 731 (831)
Q Consensus 682 ~~~~-----~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~-~~~~---------~~~~~~-------------~~ 731 (831)
+++. .+. +..+++..|++++++.+++|++.+.. ++.+. .++. .+.... ..
T Consensus 811 ~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (997)
T TIGR01106 811 RNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEF 890 (997)
T ss_pred cCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhh
Confidence 3321 122 33445566989998888766654421 21110 0110 000000 01
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccCCCCCC--cCchHHHHHHHHHHHHHHHHHHHhhh--cccccccchhHHHHHHHHHHH
Q 003313 732 EISSAVHLQVSIISQALIFVTRSQSWSFL--ERPGALLMCAFVLAQLVATLIAVYAH--ISFAYISGIGWGWAGVIWLYS 807 (831)
Q Consensus 732 ~~~t~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 807 (831)
.++|++|.+++++|.++++++|+.+.+++ +.++++++.++++.+++..++ .|.+ -..+.+.+++|.+|+++++++
T Consensus 891 ~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~~w~~~~~~~ 969 (997)
T TIGR01106 891 TCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFL-SYCPGMGVALRMYPLKPTWWFCAFPYS 969 (997)
T ss_pred hhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHH-HHhhhhHHHhccccCCHHHHHHHHHHH
Confidence 46899999999999999999999764422 234556666666555554443 4443 346778888888888888899
Q ss_pred HHHHHHHHHHHHHHHhc
Q 003313 808 LVFYILLDIIKFTVRTL 824 (831)
Q Consensus 808 ~~~~~~~e~~k~~~r~~ 824 (831)
++.+++.|+.|++.|.+
T Consensus 970 ~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 970 LLIFVYDEIRKLIIRRN 986 (997)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 89999999999988743
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-115 Score=1063.50 Aligned_cols=771 Identities=26% Similarity=0.374 Sum_probs=639.3
Q ss_pred ccccCCHHHHHHHhCCC-CCCCC-HHHHHHHHHhcCCCccCCCC-CcHHHHHHHHH-HhHHHHHHHHHHHHHHHHhcCCC
Q 003313 21 DLARLPLDEVFGQLGTT-RQGLS-SEDAEVRLKFFGSNKLEKKP-ENKFLKFLSFM-WNPLSWVMETAALMAIALANGGG 96 (831)
Q Consensus 21 ~~~~~~~~~~~~~l~~~-~~GLs-~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~-~~~~~~~l~i~ail~~~~~~~~~ 96 (831)
+||.+|++++++.|+++ .+||| ++|+++|+++||+|+++.++ +++|+.|+++| ++|+.++++++++++++++
T Consensus 3 ~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g---- 78 (884)
T TIGR01522 3 QYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG---- 78 (884)
T ss_pred chhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc----
Confidence 68999999999999998 67999 99999999999999999765 67889999999 9999999999999999986
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEE
Q 003313 97 QGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARL 176 (831)
Q Consensus 97 ~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~l 176 (831)
+|.+++.++++++++..+++++|+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+|||||+|
T Consensus 79 ---~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~i 155 (884)
T TIGR01522 79 ---NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRI 155 (884)
T ss_pred ---chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEE
Confidence 89999999989999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCeEEEcccccCCCccccccCCC--------------eeeecceeee-----------ccchhhhHHHhhhccC-cc
Q 003313 177 LEGDPLKIDQSELTGESLTVTKETGD--------------EVFSGLTCKH-----------VHSFFGKAADLVDSTE-VV 230 (831)
Q Consensus 177 l~g~~~~Vdes~LTGEs~pv~K~~g~--------------~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~ 230 (831)
++|+++.||||+|||||.|+.|.+++ .+|+||.+.+ .+|++|++.++++++. .+
T Consensus 156 i~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~k 235 (884)
T TIGR01522 156 VEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPK 235 (884)
T ss_pred EEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCC
Confidence 99977999999999999999998863 7999999887 7899999999988764 68
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHhhH---------------HH-HHHHHHHHHHHhhhcCceEEcc
Q 003313 231 GHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDR---------------IN-MLSVTLAIASYRLSQRGAITKR 294 (831)
Q Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------l~-~l~~~l~~~~~~l~~~~ilvk~ 294 (831)
+|+|+.++++++++..+.++.+++.+++.+. ....+... ++ ++++++++++.||+|+|+++|+
T Consensus 236 t~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~ 314 (884)
T TIGR01522 236 TPLQKSMDLLGKQLSLVSFGVIGVICLVGWF-QGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRK 314 (884)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccc
Confidence 9999999999987543332222222222222 12222211 11 4567888999999999999999
Q ss_pred chhhhhhcCceEEEecCCCccccCceEEEEEeeeecCC--------C---------------C--ChHHHHHHHHHhccc
Q 003313 295 MTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNR--------D---------------M--DKDILVLLAARASRL 349 (831)
Q Consensus 295 ~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~--------~---------------~--~~~~~l~~a~~~~~~ 349 (831)
++++|+||++++||||||||||+|+|+|.+++...... + . ..++++..++.|+..
T Consensus 315 ~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 394 (884)
T TIGR01522 315 LPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNA 394 (884)
T ss_pred hHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCC
Confidence 99999999999999999999999999999986421000 0 0 113455555544432
Q ss_pred c--------CCChHHHHHHHHhCCh--HHHhhccceeEEecCCCCCceEEEEEEc-CCCcEEEEEccchHHHhhhccC--
Q 003313 350 E--------NQDAIDAAIINMLADP--KEARANINEVHFLPFNPVDKRTAITYTD-SEGNWYRASKGAPEQILNMCQE-- 416 (831)
Q Consensus 350 ~--------~~~~~~~ai~~~~~~~--~~~~~~~~~l~~~~f~s~~k~~sv~v~~-~~g~~~~~~kGa~e~i~~~~~~-- 416 (831)
. .+||+|.|+++++... ...+..++.++.+||+|.+|||+++++. .+|+++.++||+||.++++|..
T Consensus 395 ~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~ 474 (884)
T TIGR01522 395 KFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQ 474 (884)
T ss_pred eecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhh
Confidence 1 2479999999986432 2234568889999999999999998875 3567889999999999999963
Q ss_pred ---------chhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCe
Q 003313 417 ---------KEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVC 487 (831)
Q Consensus 417 ---------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~ 487 (831)
+++.++++.+.+++++++|+|++++||+++ +++|+|+|+++++||+|++++++|++|+++|++
T Consensus 475 ~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~ 546 (884)
T TIGR01522 475 KKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVR 546 (884)
T ss_pred hcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCe
Confidence 123456677888899999999999999974 467999999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEc
Q 003313 488 VKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTG 567 (831)
Q Consensus 488 v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iG 567 (831)
++|+|||++.+|.++|+++||... ...++.|.+++..+++++++.+++..+|||++|+||.++|+.+|++|++|+|+|
T Consensus 547 v~miTGD~~~tA~~ia~~~Gi~~~--~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvG 624 (884)
T TIGR01522 547 IIMITGDSQETAVSIARRLGMPSK--TSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTG 624 (884)
T ss_pred EEEECCCCHHHHHHHHHHcCCCCC--CCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEEC
Confidence 999999999999999999999753 345678888998999999999999999999999999999999999999999999
Q ss_pred CCccChhhhccCCeeEEec-CchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 003313 568 DGVNDAPALKKADIGIAVA-GATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVL-LAL 645 (831)
Q Consensus 568 DG~ND~~al~~AdvgIa~~-~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~-~~~ 645 (831)
||+||+|||++|||||||| +|+++++++||+++++|||+.|++++++||++|+|++|++.|.++.|+..+..+++ ..+
T Consensus 625 DGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~ 704 (884)
T TIGR01522 625 DGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLM 704 (884)
T ss_pred CCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 9999999999999999999 79999999999999999999999999999999999999999999999976555444 445
Q ss_pred hccCCCChHHHHHHHHhhccc-hhccccCCCCCC---CCCCcc----chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 003313 646 IWEYDFPPFMVLIIAVLNDGT-IITISKGRVKSS---LRPDGW----KLNEIFAAGIVIGNYLALVTILFYWVVVHTDFF 717 (831)
Q Consensus 646 ~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~---~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 717 (831)
..+.|++|+|++|+|+++|.+ +++++++++++. ++|+++ ..+.++..+++.|+++++++++.|++.+..
T Consensus 705 ~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--- 781 (884)
T TIGR01522 705 GFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD--- 781 (884)
T ss_pred cCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC---
Confidence 567899999999999999987 589999887654 223322 235567777888988887777665543210
Q ss_pred ccccccccCCCcHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCc---CchHHHHHHHHHHHHHHHHHHHhhh--cccccc
Q 003313 718 ETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTRSQSWSFLE---RPGALLMCAFVLAQLVATLIAVYAH--ISFAYI 792 (831)
Q Consensus 718 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~ 792 (831)
+ ......+|++|.+++++|+++.+++|+++.+++. ..|++++.++++..++..++ .|.+ -.++.+
T Consensus 782 ----~-----~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~p~~~~~f~~ 851 (884)
T TIGR01522 782 ----G-----VITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLV-IYFPPLQSVFQT 851 (884)
T ss_pred ----C-----cchhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHH-HHHHHHHHHHcC
Confidence 1 1234568999999999999999999997654432 23446666666655554433 4433 245677
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 793 SGIGWGWAGVIWLYSLVFYILLDIIKFTVR 822 (831)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~e~~k~~~r 822 (831)
.|++|..|+++++++++.+++.|++|++.|
T Consensus 852 ~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~ 881 (884)
T TIGR01522 852 EALSIKDLLFLLLITSSVCIVDEIRKKVER 881 (884)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888898888888999999999999999876
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-115 Score=1065.89 Aligned_cols=790 Identities=22% Similarity=0.315 Sum_probs=633.0
Q ss_pred CHHHHHHHhCCC-CCCCC--HHHHHHHHHhcCCCccCCCCC-cHHHHHHHHHHhHHHHHHHHHHHHHHHHhc------CC
Q 003313 26 PLDEVFGQLGTT-RQGLS--SEDAEVRLKFFGSNKLEKKPE-NKFLKFLSFMWNPLSWVMETAALMAIALAN------GG 95 (831)
Q Consensus 26 ~~~~~~~~l~~~-~~GLs--~~~~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~i~ail~~~~~~------~~ 95 (831)
+++++++.|+++ ++||| ++|+++|+++||+|+++.+++ ++|+.++++|++|++++|+++++++++++. ..
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 688999999998 67999 999999999999999998765 678889999999999999999999999762 12
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccce
Q 003313 96 GQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAH-LTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADA 174 (831)
Q Consensus 96 ~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~-~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg 174 (831)
++..+|+++++++++++++.+++++++++++++.+++++. .+++++|+|||++++|++++|||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 3345899999999999999999999999999999999864 477999999999999999999999999999999999999
Q ss_pred EEEecCCeEEEcccccCCCccccccCCCe--eeecceeee-----------ccchhhhHHHhhhccCccCcHHHHHHHHH
Q 003313 175 RLLEGDPLKIDQSELTGESLTVTKETGDE--VFSGLTCKH-----------VHSFFGKAADLVDSTEVVGHFQQVLTSIG 241 (831)
Q Consensus 175 ~ll~g~~~~Vdes~LTGEs~pv~K~~g~~--v~aGt~v~~-----------~~t~~g~~~~~~~~~~~~~~l~~~~~~~~ 241 (831)
+|++|+++.||||+|||||.|+.|.+++. +|+||.+.+ .+|++|++.+++..+..++|+++.+++++
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~ 282 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELA 282 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 99999889999999999999999998775 999999887 78999999999887777789999999988
Q ss_pred HHHHHHHHHHHHH---HHHHHhhhc---h---------hhHhhHH----H------------HHHHHHHHHHHhhhcCce
Q 003313 242 NFCICFITVGMIL---EIIVMFPIQ---H---------RLYRDRI----N------------MLSVTLAIASYRLSQRGA 290 (831)
Q Consensus 242 ~~~~~~~~~~~~~---~~~~~~~~~---~---------~~~~~~l----~------------~l~~~l~~~~~~l~~~~i 290 (831)
++...+.++.+++ .+++.+... . ..+...+ . .++++++.++.+|+|+|+
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~i 362 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNN 362 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 7643322221111 111111110 0 0111111 1 456778889999999999
Q ss_pred EEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecC---CC----CC--hHHHHH-HHHHhccc-----------
Q 003313 291 ITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFN---RD----MD--KDILVL-LAARASRL----------- 349 (831)
Q Consensus 291 lvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~---~~----~~--~~~~l~-~a~~~~~~----------- 349 (831)
++|+++++|+||++++||||||||||+|+|+|.+++..... .+ .+ ..+++. .+++++..
T Consensus 363 lvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~ 442 (941)
T TIGR01517 363 LVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 442 (941)
T ss_pred EEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccc
Confidence 99999999999999999999999999999999998753210 00 01 122233 23333321
Q ss_pred cCCChHHHHHHHHhC----ChHHHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccCc--------
Q 003313 350 ENQDAIDAAIINMLA----DPKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEK-------- 417 (831)
Q Consensus 350 ~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~-------- 417 (831)
..+||+|.|+++++. +..+.+..++.++.+||+|++|+|+++++..+++++.++|||||.++++|+..
T Consensus 443 ~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~ 522 (941)
T TIGR01517 443 FIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEAT 522 (941)
T ss_pred cCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcc
Confidence 125899999998864 23334456778889999999999999998766778899999999999999631
Q ss_pred --hhhHHHHHHHHHHHHhccCeeeeeeeecCCCCC---CCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEc
Q 003313 418 --EEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMT---EDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMIT 492 (831)
Q Consensus 418 --~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~---~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~T 492 (831)
++.++++.+.+++++++|+|++++||++++.++ .+..|++|+|+|+++++||+|++++++|++||++||+++|+|
T Consensus 523 ~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miT 602 (941)
T TIGR01517 523 PISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVT 602 (941)
T ss_pred cCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEEC
Confidence 013466788889999999999999999876432 233578999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccC
Q 003313 493 GDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVND 572 (831)
Q Consensus 493 GD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND 572 (831)
||++.||.++|+++||..+ +..++.|.+++.+.++++++++++..+|||++|+||.++|+.+|++|++|+|+|||+||
T Consensus 603 GD~~~tA~~iA~~~GI~~~--~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvND 680 (941)
T TIGR01517 603 GDNIDTAKAIARNCGILTF--GGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTND 680 (941)
T ss_pred CCChHHHHHHHHHcCCCCC--CceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCch
Confidence 9999999999999999753 24678899999889999999999999999999999999999999999999999999999
Q ss_pred hhhhccCCeeEEec-CchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhccCC
Q 003313 573 APALKKADIGIAVA-GATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVL-LALIWEYD 650 (831)
Q Consensus 573 ~~al~~AdvgIa~~-~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~-~~~~~~~~ 650 (831)
+|||++|||||||| +|+|+|+++||+++++|+|++|++++++||++|+|++|++.|.+++|+..++..++ .++..+.|
T Consensus 681 apALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~p 760 (941)
T TIGR01517 681 APALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSP 760 (941)
T ss_pred HHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999 99999999999999999999999999999999999999999999999976555444 44556789
Q ss_pred CChHHHHHHHHhhccc-hhccccCCCCCC---CCCCccc----hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Q 003313 651 FPPFMVLIIAVLNDGT-IITISKGRVKSS---LRPDGWK----LNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFH 722 (831)
Q Consensus 651 ~~~~~~l~~~~~~~~~-~~~l~~~~~~~~---~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 722 (831)
++|+|++|+|+++|.+ +++++++++++. ++|+++. .+.++..++..|++++++.++++++... ++....+
T Consensus 761 l~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 838 (941)
T TIGR01517 761 LTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IFDVSGP 838 (941)
T ss_pred HHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhcccCc
Confidence 9999999999999975 799999887764 2343332 3556777888899988888866654431 2110000
Q ss_pred cccCCCcHHHHHHHHHHHHHHHHHHHhhhhccCCC-C-CCc-CchHHHHHHHHHHHHHHHHHHHhhhcccccccchhHHH
Q 003313 723 VRSLSSNTEEISSAVHLQVSIISQALIFVTRSQSW-S-FLE-RPGALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGW 799 (831)
Q Consensus 723 ~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~-~-~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (831)
...........+|++|.+++++|+++.+++|+.+. . +.. ..+++++.++++..++..++..+ .-..|.+.+++|..
T Consensus 839 ~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~-~~~~f~~~~l~~~~ 917 (941)
T TIGR01517 839 DEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEF-GGSFFSTVSLSIEQ 917 (941)
T ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHHHH-HHHHhcccCCCHHH
Confidence 00000123467899999999999999999998653 2 211 12334555555444444333222 13456777888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 003313 800 AGVIWLYSLVFYILLDIIKFT 820 (831)
Q Consensus 800 ~~~~~~~~~~~~~~~e~~k~~ 820 (831)
|+++++++++.+++.|+.|.+
T Consensus 918 w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 918 WIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 888888898888888988875
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-118 Score=991.70 Aligned_cols=786 Identities=23% Similarity=0.326 Sum_probs=629.5
Q ss_pred HHHHHHHhCCC-CCCCCH--HHHHHHHHhcCCCccCCCCC-cHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC-CCCCch
Q 003313 27 LDEVFGQLGTT-RQGLSS--EDAEVRLKFFGSNKLEKKPE-NKFLKFLSFMWNPLSWVMETAALMAIALANGG-GQGPDW 101 (831)
Q Consensus 27 ~~~~~~~l~~~-~~GLs~--~~~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~l~i~ail~~~~~~~~-~~~~~~ 101 (831)
++++++.|+++ ..|++. +|.++|++.||.|.+|++++ ++|+..|+.+.+.-.++|.++|++|+.++... +....|
T Consensus 103 v~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW 182 (1034)
T KOG0204|consen 103 VEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGW 182 (1034)
T ss_pred HHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCccc
Confidence 88999999999 779987 89999999999999999875 55667789999999999999999999988543 446689
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEEecC
Q 003313 102 QDSVGIVCLLIINSSISFIEESNAENATAALMAH-LTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGD 180 (831)
Q Consensus 102 ~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~-~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~ 180 (831)
++++.|++.+++..++....+|+.+++.++|++. ...+..|+|||+.++|+..|||||||+.|+.||.+||||++++|+
T Consensus 183 ~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn 262 (1034)
T KOG0204|consen 183 IEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGN 262 (1034)
T ss_pred ccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEecc
Confidence 9999998888777777788888888888887653 345789999999999999999999999999999999999999999
Q ss_pred CeEEEcccccCCCccccccC--CCeeeecceeee-----------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHH---
Q 003313 181 PLKIDQSELTGESLTVTKET--GDEVFSGLTCKH-----------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNF--- 243 (831)
Q Consensus 181 ~~~Vdes~LTGEs~pv~K~~--g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~--- 243 (831)
++.+|||++||||+++.|.+ +..+++||.+.+ .+|..|++...+.... +++|+|-.+++++..
T Consensus 263 ~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk 342 (1034)
T KOG0204|consen 263 SLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGK 342 (1034)
T ss_pred ceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHH
Confidence 99999999999999999987 458999999987 8999999998888775 889999888876543
Q ss_pred -HHHHHHHHHHHHHHHHhhhch-----h---hHh-----------------------hHHH-HHHHHHHHHHHhhhcCce
Q 003313 244 -CICFITVGMILEIIVMFPIQH-----R---LYR-----------------------DRIN-MLSVTLAIASYRLSQRGA 290 (831)
Q Consensus 244 -~~~~~~~~~~~~~~~~~~~~~-----~---~~~-----------------------~~l~-~l~~~l~~~~~~l~~~~i 290 (831)
.+.+.++ .++.+++.|+... . .+. ++++ .++++||++++||.+.+.
T Consensus 343 ~Gl~~A~~-~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~ 421 (1034)
T KOG0204|consen 343 IGLLFAAL-TFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNN 421 (1034)
T ss_pred HHHHHHHH-HHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchh
Confidence 2222222 2222333333210 0 110 0111 577889999999999999
Q ss_pred EEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCC--------CChH--HHH-HHHHHhcc-----------
Q 003313 291 ITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRD--------MDKD--ILV-LLAARASR----------- 348 (831)
Q Consensus 291 lvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~--------~~~~--~~l-~~a~~~~~----------- 348 (831)
+||+++|||++|+.++||+|||||||+|+|+|.+.++....+. .++. +++ .-.+.++.
T Consensus 422 LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~ 501 (1034)
T KOG0204|consen 422 LVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGE 501 (1034)
T ss_pred HHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCc
Confidence 9999999999999999999999999999999999876432211 2221 111 11121111
Q ss_pred --ccCCChHHHHHHHHh----CChHHHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccC------
Q 003313 349 --LENQDAIDAAIINML----ADPKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQE------ 416 (831)
Q Consensus 349 --~~~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~------ 416 (831)
...++|.|+|++.+. .+....+...+.++.+||+|.+|+|+++++.++|..|.++|||+|.++.+|..
T Consensus 502 ~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g 581 (1034)
T KOG0204|consen 502 QPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNG 581 (1034)
T ss_pred CccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCC
Confidence 112589999999885 45666788889999999999999999999987777459999999999999974
Q ss_pred -----chhhHHHHHHHHHHHHhccCeeeeeeeecCCCC-------C-CCCCCCCceeeeeccccCCCCCChHHHHHHHHh
Q 003313 417 -----KEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEM-------T-EDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALK 483 (831)
Q Consensus 417 -----~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~-------~-~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~ 483 (831)
+++.+..+++.++.|+++|+|++++||++.... + ++..+.+|+++|+++++||+|||++++|+.|++
T Consensus 582 ~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~ 661 (1034)
T KOG0204|consen 582 ELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQR 661 (1034)
T ss_pred CEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHH
Confidence 234456888999999999999999999984322 1 245678999999999999999999999999999
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEE
Q 003313 484 LGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVV 563 (831)
Q Consensus 484 ~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v 563 (831)
|||+|.|+||||..||++||.+|||.++..+...+.|.++.+.+++++++++++.+|+||.+|.||..+|+.++++|++|
T Consensus 662 AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VV 741 (1034)
T KOG0204|consen 662 AGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVV 741 (1034)
T ss_pred cCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEE
Confidence 99999999999999999999999998876666789999999999999999999999999999999999999999999999
Q ss_pred EEEcCCccChhhhccCCeeEEec-CchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q 003313 564 GMTGDGVNDAPALKKADIGIAVA-GATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIV-LSFV 641 (831)
Q Consensus 564 ~~iGDG~ND~~al~~AdvgIa~~-~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~-~~~~ 641 (831)
+++|||+||+|||++||||.||| .|||+|||+||+|++||||++|+++++|||++|.||+|+++|+++.|+..+ +.+.
T Consensus 742 AVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv 821 (1034)
T KOG0204|consen 742 AVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFV 821 (1034)
T ss_pred EEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhh
Confidence 99999999999999999999999 999999999999999999999999999999999999999999999998544 4444
Q ss_pred HHHHhccCCCChHHHHHHHHhhccc-hhccccCCCCCC---CCC----CccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003313 642 LLALIWEYDFPPFMVLIIAVLNDGT-IITISKGRVKSS---LRP----DGWKLNEIFAAGIVIGNYLALVTILFYWVVVH 713 (831)
Q Consensus 642 ~~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~---~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 713 (831)
.+......|++++|+||+|+++|-+ +++|+++++.+. ++| ..+..+.+++..+.+++|+.++.+.+.+...
T Consensus 822 ~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~- 900 (1034)
T KOG0204|consen 822 SACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGK- 900 (1034)
T ss_pred hhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcch-
Confidence 4445556899999999999999988 699999988764 222 3344567888888999999988886654432
Q ss_pred hhccccccccccCC-CcHHHHHHHHHHHHHHHHHHHhhhhccCC-CC-CCcCchHHHHHHHHHHHHHHHHHHHhhhcccc
Q 003313 714 TDFFETHFHVRSLS-SNTEEISSAVHLQVSIISQALIFVTRSQS-WS-FLERPGALLMCAFVLAQLVATLIAVYAHISFA 790 (831)
Q Consensus 714 ~~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~~~r~~~-~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 790 (831)
.. |+..+.. ..+.+..|++|.+++++|.++-++.|... .. |.+...++++++++...++.+++.+.....++
T Consensus 901 -~i----f~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F~~ii~~T~v~QviIveF~g~~~ 975 (1034)
T KOG0204|consen 901 -SI----FGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLFCVIITITVVSQVIIVEFGGAFF 975 (1034)
T ss_pred -hh----hccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceEEEEeeeeeehhhhhhhhcCcce
Confidence 11 2221111 12445669999999999999999999855 22 22111112333333333332322222223456
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 791 YISGIGWGWAGVIWLYSLVFYILLDIIKF 819 (831)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~e~~k~ 819 (831)
...+++|..|++++.+.+..++.-.+.|.
T Consensus 976 st~~L~~~qWl~ci~~g~~sl~~g~~ik~ 1004 (1034)
T KOG0204|consen 976 STTPLSLTQWLWCIFIGVLSLPWGQLLKC 1004 (1034)
T ss_pred eeecccHHHHHHHHHHHHHHHHHHHHhee
Confidence 77888888887777777776666666664
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-107 Score=987.94 Aligned_cols=752 Identities=27% Similarity=0.359 Sum_probs=598.9
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcCC---CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEEC
Q 003313 69 FLSFMWNPLSWVMETAALMAIALANGG---GQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRD 145 (831)
Q Consensus 69 ~~~~~~~~~~~~l~i~ail~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rd 145 (831)
++++|++|+.++|+++++++++++... ....+|.++++|+++++++..+++++|+|+++++++|++..+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 468999999999999999999986321 22358999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCCcCCCcEEEEcCCCccccceEEEecCCeEEEcccccCCCccccccCC-------------Ceeeecceeee
Q 003313 146 GQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETG-------------DEVFSGLTCKH 212 (831)
Q Consensus 146 g~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g-------------~~v~aGt~v~~ 212 (831)
|++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.++ +.+|+||.+.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999997799999999999999999875 78999999987
Q ss_pred -----------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-c----hhhH----h---
Q 003313 213 -----------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPI-Q----HRLY----R--- 268 (831)
Q Consensus 213 -----------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~----~--- 268 (831)
.+|..|++.+.++..+ +++|+|+.+++++.++..+.++.+++.+++.... . ...+ .
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 7999999999887764 7899999999998765433322222222211100 0 0001 1
Q ss_pred -hHHH------------HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeec-----
Q 003313 269 -DRIN------------MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVF----- 330 (831)
Q Consensus 269 -~~l~------------~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~----- 330 (831)
.++. .+++++++++++|+++|+++|+++++|+||++++||||||||||+|+|+|.+++....
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 1111 4567888999999999999999999999999999999999999999999999864210
Q ss_pred ------CCCCC-------------------hHHHHHHHHHhccc------------cCCChHHHHHHHHhCChH------
Q 003313 331 ------NRDMD-------------------KDILVLLAARASRL------------ENQDAIDAAIINMLADPK------ 367 (831)
Q Consensus 331 ------~~~~~-------------------~~~~l~~a~~~~~~------------~~~~~~~~ai~~~~~~~~------ 367 (831)
+..++ .+.++..++.|+.. ..+||.|.|++.++.+.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 00000 12344455555431 125999999998753211
Q ss_pred --------------HHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccC-----------chhhHH
Q 003313 368 --------------EARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQE-----------KEEIGG 422 (831)
Q Consensus 368 --------------~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~-----------~~~~~~ 422 (831)
..+..++.++.+||+|+||||++++++ ++++++++|||||.|+++|+. +++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 124567789999999999999999875 467889999999999999963 123466
Q ss_pred HHHHHHHHHHh-ccCeeeeeeeecCCCCC----------CCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEE
Q 003313 423 KVHEIINKLAE-KGLRSLAVAVQEVPEMT----------EDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMI 491 (831)
Q Consensus 423 ~~~~~~~~~~~-~G~r~l~~a~~~~~~~~----------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~ 491 (831)
++.+.++++++ +|+||+++||+.++.++ .+++|++|+|+|+++++||+|++++++|++||++|++++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78888999999 99999999999986421 24568999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHhCCCCCCCC--CccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCC
Q 003313 492 TGDHLAIAKETGRRLGIGTNMYP--SSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDG 569 (831)
Q Consensus 492 TGD~~~~a~~ia~~~gi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG 569 (831)
|||+..+|.++|+++|+..+..+ ...+.|.+++.+++++..+...+..+|||++|+||.++|+.+|+.|++|+|+|||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG 639 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDG 639 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCC
Confidence 99999999999999999753211 2356777777777888888888889999999999999999999999999999999
Q ss_pred ccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcc
Q 003313 570 VNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLL-ALIWE 648 (831)
Q Consensus 570 ~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~-~~~~~ 648 (831)
.||+|||++||||||||+|++.+|++||+++.+|||++|++++++||++|+|+++++.|.++.|+..++..+++ .+.++
T Consensus 640 ~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~ 719 (917)
T TIGR01116 640 VNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIP 719 (917)
T ss_pred cchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999776666554 34466
Q ss_pred CCCChHHHHHHHHhhccc-hhccccCCCCCCC--CC-C----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccc
Q 003313 649 YDFPPFMVLIIAVLNDGT-IITISKGRVKSSL--RP-D----GWKLNEIFAAGIVIGNYLALVTILFYWVVVHT-DFFET 719 (831)
Q Consensus 649 ~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~--~~-~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~ 719 (831)
.|++|+|++|+|+++|.+ +++++.++++++. +| + +...+..+..++..|+++++++++.|++.+.. ++...
T Consensus 720 ~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 799 (917)
T TIGR01116 720 EGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGC 799 (917)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccc
Confidence 899999999999999965 6889988876542 22 2 12235567778888999998877666554432 21110
Q ss_pred --cc--ccccCC-------CcHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCc---CchHHHHHHHHHHHHHHHHHHHhh
Q 003313 720 --HF--HVRSLS-------SNTEEISSAVHLQVSIISQALIFVTRSQSWSFLE---RPGALLMCAFVLAQLVATLIAVYA 785 (831)
Q Consensus 720 --~~--~~~~~~-------~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~ 785 (831)
.. +..+.. ....+.+|++|.+++++|+++.+++|+++.+++. ..|.+++.+++++.++..++ .|.
T Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~-~~v 878 (917)
T TIGR01116 800 DEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLI-LYV 878 (917)
T ss_pred cccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHHHH-HHh
Confidence 00 000000 0134578999999999999999999997644332 23445555555555544333 444
Q ss_pred h--cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 786 H--ISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVR 822 (831)
Q Consensus 786 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~k~~~r 822 (831)
+ -..|.+.|++|..|+++++++++.++.+|+.|++.|
T Consensus 879 ~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 879 PFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3 245678888999998889999999999999998764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-108 Score=906.98 Aligned_cols=811 Identities=23% Similarity=0.362 Sum_probs=660.4
Q ss_pred CCccccCCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCccCCCC-CcHHHHHHHHHHhHHHHHHHHHHHHHHHHhc---
Q 003313 19 GIDLARLPLDEVFGQLGTT-RQGLSSEDAEVRLKFFGSNKLEKKP-ENKFLKFLSFMWNPLSWVMETAALMAIALAN--- 93 (831)
Q Consensus 19 ~~~~~~~~~~~~~~~l~~~-~~GLs~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~i~ail~~~~~~--- 93 (831)
.+|.|.+|++|+.+++.++ .+|||.+++.+++.+.|+|.+++|+ .+.|.+|.+|+++.+.++++++++++++.+.
T Consensus 36 ~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~ 115 (1019)
T KOG0203|consen 36 SMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQA 115 (1019)
T ss_pred eeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhc
Confidence 4778999999999999999 8899999999999999999998776 5678999999999999999999999998542
Q ss_pred ---CCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCcc
Q 003313 94 ---GGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVI 170 (831)
Q Consensus 94 ---~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~i 170 (831)
+.......+.+.++..++++..++.++|+.+..+.+++++++.|+.+.|+|||+..++..++||+||+|.++-||+|
T Consensus 116 s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrV 195 (1019)
T KOG0203|consen 116 STEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRV 195 (1019)
T ss_pred ccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCcc
Confidence 11112334456666667777888999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEecCCeEEEcccccCCCccccccCC----------Ceeeecceeee-----------ccchhhhHHHhhhc-cC
Q 003313 171 PADARLLEGDPLKIDQSELTGESLTVTKETG----------DEVFSGLTCKH-----------VHSFFGKAADLVDS-TE 228 (831)
Q Consensus 171 PaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g----------~~v~aGt~v~~-----------~~t~~g~~~~~~~~-~~ 228 (831)
|||.+++++..++||+|+|||||+|..+.+. |..|.+|.+.+ .+|.+|+++.+-.. ..
T Consensus 196 PADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~ 275 (1019)
T KOG0203|consen 196 PADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLED 275 (1019)
T ss_pred cceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCC
Confidence 9999999999999999999999999998763 56777777665 79999999988766 35
Q ss_pred ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHhh---------------HHH-HHHHHHHHHHHhhhcCceEE
Q 003313 229 VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRD---------------RIN-MLSVTLAIASYRLSQRGAIT 292 (831)
Q Consensus 229 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~l~-~l~~~l~~~~~~l~~~~ilv 292 (831)
.++|++..++.+..+.....++..++.+.+.... +..+.. ++. .+++.++.-.+||+++++++
T Consensus 276 ~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~-gy~~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~v 354 (1019)
T KOG0203|consen 276 GKTPIAKEIEHFIHIITGVAIFLGISFFILALIL-GYEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLV 354 (1019)
T ss_pred CCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh-cchhHHHhhhhheeEEecCcCCccceehhhHHHHHHHHhhceeEE
Confidence 7889999988887763322222111111111111 222221 121 46778889999999999999
Q ss_pred ccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCC----------------CCChHHHHHHHHHhccc-------
Q 003313 293 KRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNR----------------DMDKDILVLLAARASRL------- 349 (831)
Q Consensus 293 k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~----------------~~~~~~~l~~a~~~~~~------- 349 (831)
|+++++|+||+.++||+|||||||+|+|+|.+.+.+..-. +..-..+.+++..|++.
T Consensus 355 knLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~ 434 (1019)
T KOG0203|consen 355 KNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQD 434 (1019)
T ss_pred eeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceeccccc
Confidence 9999999999999999999999999999999987531100 01113466667666542
Q ss_pred --------cCCChHHHHHHHHh----CChHHHhhccceeEEecCCCCCceEEEEEEcCC---CcEEEEEccchHHHhhhc
Q 003313 350 --------ENQDAIDAAIINML----ADPKEARANINEVHFLPFNPVDKRTAITYTDSE---GNWYRASKGAPEQILNMC 414 (831)
Q Consensus 350 --------~~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~---g~~~~~~kGa~e~i~~~~ 414 (831)
..+|+.+.|+++++ ++..+.++.++.+..+||+|.+|+.-.+....+ .+..+.+|||||.++++|
T Consensus 435 dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~C 514 (1019)
T KOG0203|consen 435 DVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRC 514 (1019)
T ss_pred CCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhc
Confidence 23689999999986 355677889999999999999999887776443 567888999999999999
Q ss_pred cC----------chhhHHHHHHHHHHHHhccCeeeeeeeecCCCCC-----------CCCCCCCceeeeeccccCCCCCC
Q 003313 415 QE----------KEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMT-----------EDSPGGPRSFCGLLPLFDPPRHD 473 (831)
Q Consensus 415 ~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~-----------~~~~e~~l~~lG~i~~~D~lr~~ 473 (831)
+. ++...+.+.+...++...|-||++++++.+++++ -+...++|.|+|++++-||||..
T Consensus 515 STi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~ 594 (1019)
T KOG0203|consen 515 STILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAA 594 (1019)
T ss_pred cceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCccc
Confidence 74 3456677888888999999999999999987553 12345789999999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC----------------------CCccccCCcCCCCCcccH
Q 003313 474 SSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY----------------------PSSLLLGRDKDENEALPV 531 (831)
Q Consensus 474 ~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~----------------------~~~~~~~~~~~~~~~~~~ 531 (831)
+++++..||.+||+++|+|||++.||+++|++.||..... ...+++|.++..++.+++
T Consensus 595 vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~ql 674 (1019)
T KOG0203|consen 595 VPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQL 674 (1019)
T ss_pred CchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHH
Confidence 9999999999999999999999999999999999754110 123578889999999999
Q ss_pred HHHHHhcC--cEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEec-CchHHHhhhcCEEEeCCChhHH
Q 003313 532 DELIEKAD--GFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-GATEAARGAADIVLTEPGLSVI 608 (831)
Q Consensus 532 ~~~~~~~~--v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~-~~~~~a~~aadivl~~~~~~~i 608 (831)
++++.+.. ||||.||+||..||+.+|++|.+|+++|||+||+||||.|||||||| .|+|++|+|||+||+||||++|
T Consensus 675 d~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASI 754 (1019)
T KOG0203|consen 675 DELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASI 754 (1019)
T ss_pred HHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhh
Confidence 99998765 89999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhccCCCChHHHHHHHHhhccc-hhccccCCCCCC---CCCCc
Q 003313 609 CSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVL-LALIWEYDFPPFMVLIIAVLNDGT-IITISKGRVKSS---LRPDG 683 (831)
Q Consensus 609 ~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~---~~~~~ 683 (831)
+..+++||-+|+|.||.+.|.++.|+..+..++. .++..|.|+.++++|.+.+.+|++ +++++|+.++.. ++|++
T Consensus 755 VtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~ 834 (1019)
T KOG0203|consen 755 VTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRN 834 (1019)
T ss_pred eeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCCCC
Confidence 9999999999999999999999999976555544 456689999999999999999987 699999987654 22332
Q ss_pred -----c-chHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhccccc-c---------ccccCCCcH-------------HHH
Q 003313 684 -----W-KLNEIFAAGIVIGNYLALVTILFYWV-VVHTDFFETH-F---------HVRSLSSNT-------------EEI 733 (831)
Q Consensus 684 -----~-~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~-~---------~~~~~~~~~-------------~~~ 733 (831)
+ +.+-+...++..|+++++.+|+.|+. ++..+|+|.. . +++++.+++ .+.
T Consensus 835 p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc 914 (1019)
T KOG0203|consen 835 PKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTC 914 (1019)
T ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhh
Confidence 2 23445556688899999999866554 4555666532 1 122222221 145
Q ss_pred HHHHHHHHHHHHHHHhhhhccCCCC--CCcCchHHHHHHHHHHHHHHHHHHHhhh--cccccccchhHHHHHHHHHHHHH
Q 003313 734 SSAVHLQVSIISQALIFVTRSQSWS--FLERPGALLMCAFVLAQLVATLIAVYAH--ISFAYISGIGWGWAGVIWLYSLV 809 (831)
Q Consensus 734 ~t~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 809 (831)
+|+.|+++++.|++..+.+.+++-+ -++..||.++++++.-+.+++++ .|.+ ...+++.|+.|.||+..+.++++
T Consensus 915 ~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl-~y~pg~~~~l~~~pl~~~~wl~a~P~~il 993 (1019)
T KOG0203|consen 915 YTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFL-CYCPGVLYALGMYPLKFQWWLVAFPFGIL 993 (1019)
T ss_pred hhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHH-hcCccHHHHhccCCCCcEEEEecccceee
Confidence 6889999999999988888777744 45678889999998887776655 4444 34567889999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccCC
Q 003313 810 FYILLDIIKFTVRTLSREAWNQ 831 (831)
Q Consensus 810 ~~~~~e~~k~~~r~~~~~~w~~ 831 (831)
+++.+|+.|++.|.+++..|.|
T Consensus 994 IfvydE~Rk~~IR~~P~gw~e~ 1015 (1019)
T KOG0203|consen 994 IFVYDEVRKLFIRRYPGGWLEK 1015 (1019)
T ss_pred eeeHHHHHhHhhhhCCCchhhh
Confidence 9999999999999887777654
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-104 Score=979.03 Aligned_cols=745 Identities=20% Similarity=0.239 Sum_probs=565.5
Q ss_pred CCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHH
Q 003313 38 RQGLSSEDAEVRLKFFGSNKLEKKPENKFLKFLSFMWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSI 117 (831)
Q Consensus 38 ~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~i~ail~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i 117 (831)
.+|||++|+++|+++||+|+++.+++++++.+++++++|++++++++++++++ . .+|+++++++++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l~~~-~------~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLL-D------EYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHHHHh-h------hhHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999888999999999999998877777555544 2 3789999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEc--CCCccccceEEEecCCeEEEcccccCCCcc
Q 003313 118 SFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIK--FGDVIPADARLLEGDPLKIDQSELTGESLT 195 (831)
Q Consensus 118 ~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~--~G~~iPaDg~ll~g~~~~Vdes~LTGEs~p 195 (831)
..++++|+.++++++.. .++.++|+|||++++|+++||||||+|.|+ +|++|||||+|++| ++.||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g-~~~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeC-cEEEecccccCCccc
Confidence 99999999998888654 577999999999999999999999999999 99999999999999 799999999999999
Q ss_pred ccccCC------------------Ceeeecceeee------------------ccchhhhHHHhhhccC-ccCcHHHHHH
Q 003313 196 VTKETG------------------DEVFSGLTCKH------------------VHSFFGKAADLVDSTE-VVGHFQQVLT 238 (831)
Q Consensus 196 v~K~~g------------------~~v~aGt~v~~------------------~~t~~g~~~~~~~~~~-~~~~l~~~~~ 238 (831)
+.|.+. +++|+||.+.+ .+|..|++.+.+...+ ..+++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999752 25999999962 5788899998876654 5678888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhchhhHhh---------------HHH-HHHHHHHHHHHhhhcCceEEccchhhhhhc
Q 003313 239 SIGNFCICFITVGMILEIIVMFPIQHRLYRD---------------RIN-MLSVTLAIASYRLSQRGAITKRMTAIEEMA 302 (831)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~l~-~l~~~l~~~~~~l~~~~ilvk~~~~le~lg 302 (831)
++..++..+.+++++..++.. ...+..+.. +++ .+++++++|+.||+|+|++||+++++|++|
T Consensus 368 ~~~~~l~~~a~i~~i~~~~~~-~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIYTIIEL-IKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 776654333322222211111 111112111 111 466788899999999999999999999999
Q ss_pred CceEEEecCCCccccCceEEEEEeeeecCCC----------CChHHHHHHHHHhccc------cCCChHHHHHHHHhCCh
Q 003313 303 RMDVLCSVKTAALTLNRLTVDRNLIEVFNRD----------MDKDILVLLAARASRL------ENQDAIDAAIINMLADP 366 (831)
Q Consensus 303 ~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~----------~~~~~~l~~a~~~~~~------~~~~~~~~ai~~~~~~~ 366 (831)
+++++|||||||||+|+|+|.+++....... .....+....+.|+.. ..+||+|.|++++.+..
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999999764211100 0112223333333321 23699999999986411
Q ss_pred HHH-------------------hhccceeEEecCCCCCceEEEEEEcCC-CcEEEEEccchHHHhhhccCchhhHHHHHH
Q 003313 367 KEA-------------------RANINEVHFLPFNPVDKRTAITYTDSE-GNWYRASKGAPEQILNMCQEKEEIGGKVHE 426 (831)
Q Consensus 367 ~~~-------------------~~~~~~l~~~~f~s~~k~~sv~v~~~~-g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~ 426 (831)
.+. ...+++++.+||+|++||||++++..+ +++++++|||||.|+++|.. ++.++++.+
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-ETVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-cCCChhHHH
Confidence 000 245788999999999999999998643 56789999999999999985 346788999
Q ss_pred HHHHHHhccCeeeeeeeecCCCC--------CCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHH
Q 003313 427 IINKLAEKGLRSLAVAVQEVPEM--------TEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAI 498 (831)
Q Consensus 427 ~~~~~~~~G~r~l~~a~~~~~~~--------~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~ 498 (831)
.+++++++|+||+++|||++++. ++++.|+||+|+|+++|+||+|++++++|++|+++||+++|+||||+.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998632 2466899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCC-------------C--------------------------------------ccccCCcCCC--
Q 003313 499 AKETGRRLGIGTNMYP-------------S--------------------------------------SLLLGRDKDE-- 525 (831)
Q Consensus 499 a~~ia~~~gi~~~~~~-------------~--------------------------------------~~~~~~~~~~-- 525 (831)
|.++|+++||..+... . .++.|.+++.
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 9999999999643210 0 0111211111
Q ss_pred -CCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCC
Q 003313 526 -NEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPG 604 (831)
Q Consensus 526 -~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~ 604 (831)
..++++.++++++.||||++|+||.++|+.+|+.|++|+|+|||+||+||||+||||||||++ |+ ..+||+++.+++
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-da-s~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EA-SVAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cc-eeecccccCCCc
Confidence 223457778888899999999999999999999999999999999999999999999999965 44 489999999999
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHhhccc-hhccccCCCCCC---CC
Q 003313 605 LSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGT-IITISKGRVKSS---LR 680 (831)
Q Consensus 605 ~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~---~~ 680 (831)
|++|+++|++||+++.|+++.++|.+.+++..+...++ ....+.+++++|++|++++++.+ +++++.+++.++ .+
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~ 922 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI-LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKER 922 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCC
Confidence 99999999999999999999999999999876555443 33456899999999999999987 588888887664 23
Q ss_pred CC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccc-CCCcHHHHHHHHHHHHHHHHHHHhhhhccCCCC
Q 003313 681 PD-GWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRS-LSSNTEEISSAVHLQVSIISQALIFVTRSQSWS 758 (831)
Q Consensus 681 ~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~ 758 (831)
|. +...+..+...+.++++..++.+..|++.....|+........ .........|++| .++.++++..+.+++....
T Consensus 923 P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~g~p 1001 (1054)
T TIGR01657 923 PPSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSKGPP 1001 (1054)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcCCcc
Confidence 33 2333556667777788888887777766654444321111000 0001223457777 5566677766777765532
Q ss_pred C----CcCchHHHHHHHHHHHHHHHHHHH-hhh--cccccccchhHHH
Q 003313 759 F----LERPGALLMCAFVLAQLVATLIAV-YAH--ISFAYISGIGWGW 799 (831)
Q Consensus 759 ~----~~~~~~~l~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~ 799 (831)
+ ++|+ +++.+++++.++..++.+ +.+ ...+.+.+++..|
T Consensus 1002 f~~~~~~N~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 1047 (1054)
T TIGR01657 1002 FREPIYKNK--PFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLPQEF 1047 (1054)
T ss_pred hhhhHHHhH--HHHHHHHHHHHHHHHhhhCCCHHHHhhheeeeCCHHH
Confidence 2 3343 444444444333332222 322 2345555555444
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-90 Score=853.35 Aligned_cols=759 Identities=17% Similarity=0.205 Sum_probs=539.9
Q ss_pred cCCCccCCCCCcHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 53 FGSNKLEKKPENKF----LKFLSFMWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENA 128 (831)
Q Consensus 53 ~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~i~ail~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~ 128 (831)
|.+|.+...|++.| +.+++||.++.+++|+++++++++..... ...+...+.++++++++.+.+++++++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~--~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSP--TYRGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCC--CCccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999998775 78899999999999999999999854221 1123334445555667788889999988887
Q ss_pred HHHHhccCCCeEEEEEC-CEEEEEeCCCcCCCcEEEEcCCCccccceEEEecCC----eEEEcccccCCCccccccCC--
Q 003313 129 TAALMAHLTPKTKVLRD-GQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDP----LKIDQSELTGESLTVTKETG-- 201 (831)
Q Consensus 129 ~~~l~~~~~~~~~V~rd-g~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~~----~~Vdes~LTGEs~pv~K~~g-- 201 (831)
.++. +++.++|+|+ |++++++++||+|||+|.|++||+|||||+|+++++ +.||||+|||||.|+.|.+.
T Consensus 79 d~~~---n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKEV---NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHHH---hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 7654 5689999997 899999999999999999999999999999998644 99999999999999988641
Q ss_pred ----------------------------------------------Ceeeecceeee------ccchhhhHHHhhhcc--
Q 003313 202 ----------------------------------------------DEVFSGLTCKH------VHSFFGKAADLVDST-- 227 (831)
Q Consensus 202 ----------------------------------------------~~v~aGt~v~~------~~t~~g~~~~~~~~~-- 227 (831)
+.+++||.+.+ ...+.|+.+++..+.
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~ 235 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQ 235 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCC
Confidence 34677777766 455677777766554
Q ss_pred --CccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhch----hhH-------------------hhHHH----------
Q 003313 228 --EVVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQH----RLY-------------------RDRIN---------- 272 (831)
Q Consensus 228 --~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-------------------~~~l~---------- 272 (831)
.+.+++++.++++..+++.+.++.+++..++...... ..| ...+.
T Consensus 236 ~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL 315 (1057)
T TIGR01652 236 APSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISL 315 (1057)
T ss_pred CcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcceee
Confidence 2678999999999877544433322222222111110 011 01111
Q ss_pred --HHHHHHHHHH------HhhhcC----ceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCC-------
Q 003313 273 --MLSVTLAIAS------YRLSQR----GAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRD------- 333 (831)
Q Consensus 273 --~l~~~l~~~~------~~l~~~----~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~------- 333 (831)
.+.++.++++ .+|.++ ++++|+.+++|+||++++||+|||||||+|+|+++++.++...++
T Consensus 316 ~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~ 395 (1057)
T TIGR01652 316 YVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIK 395 (1057)
T ss_pred eehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHH
Confidence 1223334444 567764 599999999999999999999999999999999999876321000
Q ss_pred ------C--------------------C----------------hHHHHHHHHHhccc-------c-------CCChHHH
Q 003313 334 ------M--------------------D----------------KDILVLLAARASRL-------E-------NQDAIDA 357 (831)
Q Consensus 334 ------~--------------------~----------------~~~~l~~a~~~~~~-------~-------~~~~~~~ 357 (831)
. + ..+++..++.|+.. . .++|.|.
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ 475 (1057)
T TIGR01652 396 DAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEA 475 (1057)
T ss_pred HHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHH
Confidence 0 0 01233333333211 1 2589999
Q ss_pred HHHHHhCChH------------------HHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccC-ch
Q 003313 358 AIINMLADPK------------------EARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQE-KE 418 (831)
Q Consensus 358 ai~~~~~~~~------------------~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~-~~ 418 (831)
|+++++...+ .....|++++.+||+|+|||||+++++++|++++++|||||.|+++|.. .+
T Consensus 476 ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~~ 555 (1057)
T TIGR01652 476 ALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGN 555 (1057)
T ss_pred HHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccch
Confidence 9998763211 0224688899999999999999999988888899999999999999974 34
Q ss_pred hhHHHHHHHHHHHHhccCeeeeeeeecCCCCC-------------------------CCCCCCCceeeeeccccCCCCCC
Q 003313 419 EIGGKVHEIINKLAEKGLRSLAVAVQEVPEMT-------------------------EDSPGGPRSFCGLLPLFDPPRHD 473 (831)
Q Consensus 419 ~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~-------------------------~~~~e~~l~~lG~i~~~D~lr~~ 473 (831)
+.++.+.+++++++++|+||+++|+|.+++++ .+++|+||+|+|+++++||+|++
T Consensus 556 ~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~ 635 (1057)
T TIGR01652 556 QVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEG 635 (1057)
T ss_pred hHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhc
Confidence 55778889999999999999999999987532 13468999999999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCc-------------------------------------
Q 003313 474 SSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSS------------------------------------- 516 (831)
Q Consensus 474 ~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~------------------------------------- 516 (831)
++++|++|+++||++||+|||+.+||.++|++||+..+.....
T Consensus 636 v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 715 (1057)
T TIGR01652 636 VPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNV 715 (1057)
T ss_pred cHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCce
Confidence 9999999999999999999999999999999999975421100
Q ss_pred --cccCCcCCCCCc----ccHHHHHHhcC--cEEEeChHHHHHHHHHHhhc-CCEEEEEcCCccChhhhccCCeeEEec-
Q 003313 517 --LLLGRDKDENEA----LPVDELIEKAD--GFTDVFAEHKYEIVKILQEK-KHVVGMTGDGVNDAPALKKADIGIAVA- 586 (831)
Q Consensus 517 --~~~~~~~~~~~~----~~~~~~~~~~~--v~~~~~P~~K~~iv~~l~~~-g~~v~~iGDG~ND~~al~~AdvgIa~~- 586 (831)
++.|..++...+ +.+.+++..++ ||||++|+||.++|+.+|+. |++|+|+|||+||+|||++|||||++.
T Consensus 716 ~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g 795 (1057)
T TIGR01652 716 ALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISG 795 (1057)
T ss_pred EEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecC
Confidence 233333221111 12344555565 99999999999999999998 999999999999999999999999884
Q ss_pred CchHHHhhhcCEEEeCCChhHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----CCCChHHHHHHHH
Q 003313 587 GATEAARGAADIVLTEPGLSVICSAV-LTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWE----YDFPPFMVLIIAV 661 (831)
Q Consensus 587 ~~~~~a~~aadivl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~----~~~~~~~~l~~~~ 661 (831)
.....|+.+||+++.+ |+.+.+++ .+||++|+|+++++.|.++.|+..++..+++.++.+ .++.+++++|+|+
T Consensus 796 ~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~ 873 (1057)
T TIGR01652 796 KEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNV 873 (1057)
T ss_pred hHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 2222578899999975 99999998 889999999999999999999987777766655432 2578889999999
Q ss_pred hhccc-hhcccc-CCCCCC----CCCC--------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccCC
Q 003313 662 LNDGT-IITISK-GRVKSS----LRPD--------GWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLS 727 (831)
Q Consensus 662 ~~~~~-~~~l~~-~~~~~~----~~~~--------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 727 (831)
+.+.+ +++++. +++.++ ..|+ +....+.+..+++.|++++++.+++.++.+...... ..| ..
T Consensus 874 ~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~-~~g---~~ 949 (1057)
T TIGR01652 874 FFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFV-SSG---SL 949 (1057)
T ss_pred HHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc-cCC---cc
Confidence 88875 577754 332211 1121 122234455567789999988875554444321111 112 11
Q ss_pred CcHHHHHHHHHHHHHHHHHHHh-hhhccCCCCCCcCchHHHHHHHHHHHHHHHHH-HHhhh-------cccccccchhHH
Q 003313 728 SNTEEISSAVHLQVSIISQALI-FVTRSQSWSFLERPGALLMCAFVLAQLVATLI-AVYAH-------ISFAYISGIGWG 798 (831)
Q Consensus 728 ~~~~~~~t~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~ 798 (831)
.+.....+..|+.+++...+.+ ..+++ |+|. .++++++++++..++ ..|.. ++.+......+.
T Consensus 950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--wt~~------~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 1021 (1057)
T TIGR01652 950 DDFSSVGVIVFTALVVIVNLKIALEINR--WNWI------SLITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFG 1021 (1057)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhH--hHHH------HHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHccHH
Confidence 2345566777877777766654 33343 3321 122222222221111 11111 011111112344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccccC
Q 003313 799 WAGVIWLYSLVFYILLDIIKFTVRTLSREAWN 830 (831)
Q Consensus 799 ~~~~~~~~~~~~~~~~e~~k~~~r~~~~~~w~ 830 (831)
+|+.+++..++.++++-++|.+.|+|.|+.|+
T Consensus 1022 f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~~~ 1053 (1057)
T TIGR01652 1022 FWLVLLVIVLISLLPRFTYKAIQRLFRPPDYD 1053 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 56666777777888888999999988888765
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-88 Score=778.94 Aligned_cols=520 Identities=22% Similarity=0.317 Sum_probs=418.9
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCCC--CCCc--hhhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhccCCC-eEE
Q 003313 71 SFMWNPLSWVMETAALMAIALANGGG--QGPD--WQDSVGIVCLLIINSSISFIE----ESNAENATAALMAHLTP-KTK 141 (831)
Q Consensus 71 ~~~~~~~~~~l~i~ail~~~~~~~~~--~~~~--~~~~~~i~~~~~~~~~i~~~~----~~~~~~~~~~l~~~~~~-~~~ 141 (831)
.+++||+.++++++++++++++.... .... +.+++.|.++++++.+++.++ |+|++++.++|+++.++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 46899999999999999998763210 0111 245666667777777666666 78999999999998876 675
Q ss_pred -EEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEEecCCeEEEcccccCCCccccccCC---Ceeeecceeee-----
Q 003313 142 -VLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETG---DEVFSGLTCKH----- 212 (831)
Q Consensus 142 -V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g---~~v~aGt~v~~----- 212 (831)
|.|||++++|++++|+|||+|.|++||+|||||+|++| ...||||+|||||.|+.|++| +.||+||.+.+
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEc-ceEEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 78999999999999999999999999999999999999 679999999999999999999 88999999887
Q ss_pred ------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hchh----hHhhHH---------
Q 003313 213 ------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCICFITVGMILEIIVMFP-IQHR----LYRDRI--------- 271 (831)
Q Consensus 213 ------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~l--------- 271 (831)
.+|++||+.+++++++ +++|+|.....+.....+++++ ++.++..+. +... .+..++
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii~l~--~~~~~~~~~~~~~~~~~~~~~val~V~~IP~aL 264 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIFLV--VILTMYPLAKFLNFNLSIAMLIALAVCLIPTTI 264 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHHHHH--HHHHHHHHHhhccHHHHHHHHHHHHHHhhhhhH
Confidence 7999999999998875 7889987665544322211111 111111010 0000 011111
Q ss_pred H-HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhcccc
Q 003313 272 N-MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLE 350 (831)
Q Consensus 272 ~-~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~ 350 (831)
. .+++.++.|+.||+|+|+++|+++++|++|++|++|||||||||+|++.+.++.. ..+.+.++++..++.++..+
T Consensus 265 ~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~---~~~~~~~~ll~~a~~~~~~s 341 (673)
T PRK14010 265 GGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIP---VKSSSFERLVKAAYESSIAD 341 (673)
T ss_pred HHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEe---CCCccHHHHHHHHHHhcCCC
Confidence 1 3455567789999999999999999999999999999999999998877766432 23455667777777776555
Q ss_pred CCChHHHHHHHHhCChHHHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccCch-hhHHHHHHHHH
Q 003313 351 NQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKE-EIGGKVHEIIN 429 (831)
Q Consensus 351 ~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~~-~~~~~~~~~~~ 429 (831)
+ ||+++|++.++..... .......+++||++++|+|++.+ +|+ .+.||+++.++++|.... ..+.++.+..+
T Consensus 342 ~-~P~~~AIv~~a~~~~~-~~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~ 414 (673)
T PRK14010 342 D-TPEGRSIVKLAYKQHI-DLPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVK 414 (673)
T ss_pred C-ChHHHHHHHHHHHcCC-CchhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHHH
Confidence 4 9999999988642210 00111235689999999999864 343 456999999999997421 23345667778
Q ss_pred HHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 003313 430 KLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIG 509 (831)
Q Consensus 430 ~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~ 509 (831)
+++++|+|+++++.+ ++++|+++++||+|+|++++|++||++||+++|+||||+.||.++|+++||+
T Consensus 415 ~~a~~G~~~l~v~~~-------------~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~ 481 (673)
T PRK14010 415 GVSKKGGTPLVVLED-------------NEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD 481 (673)
T ss_pred HHHhCCCeEEEEEEC-------------CEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc
Confidence 899999999998743 3899999999999999999999999999999999999999999999999995
Q ss_pred CCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCch
Q 003313 510 TNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGAT 589 (831)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~ 589 (831)
. +|+|++||||.++|+.+|++|++|+|+|||+||+|||++||||||||+|+
T Consensus 482 ~-----------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGT 532 (673)
T PRK14010 482 R-----------------------------FVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGT 532 (673)
T ss_pred e-----------------------------EEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCCCC
Confidence 2 69999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 590 EAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLAL 645 (831)
Q Consensus 590 ~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~ 645 (831)
|+||++||+|++||||+.|++++++||++|.|+++++.|.++.|+...+..+.+.+
T Consensus 533 dvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 533 MSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred HHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999976655544433
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-85 Score=798.55 Aligned_cols=756 Identities=15% Similarity=0.156 Sum_probs=524.9
Q ss_pred HhcCCCccCCCCCcHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 51 KFFGSNKLEKKPENKF----LKFLSFMWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAE 126 (831)
Q Consensus 51 ~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~i~ail~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~ 126 (831)
.+|..|.+...|++.| +.+++||.++.+++++++++++++..... ...+...+.+++++++..+.+.+++++++
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~--~~~~t~~~PL~~vl~v~~ike~~Ed~~r~ 162 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAV--FGRGASILPLAFVLLVTAVKDAYEDWRRH 162 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCccc--CCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3689999999998875 67889999999999999999998854222 12344455666677777777888888887
Q ss_pred HHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEEecC----CeEEEcccccCCCccccccCC-
Q 003313 127 NATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGD----PLKIDQSELTGESLTVTKETG- 201 (831)
Q Consensus 127 ~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~----~~~Vdes~LTGEs~pv~K~~g- 201 (831)
++.++. ++..++|+|+|+++++++++|+|||+|.|++||+|||||++++++ .+.||||+|||||.|+.|.++
T Consensus 163 k~d~~~---N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 163 RSDRIE---NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred HhHHhh---cCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccc
Confidence 776554 467899999999999999999999999999999999999999843 489999999999999999753
Q ss_pred --------------------------------------------Ceeeecceeee------ccchhhhHHHhhhccC---
Q 003313 202 --------------------------------------------DEVFSGLTCKH------VHSFFGKAADLVDSTE--- 228 (831)
Q Consensus 202 --------------------------------------------~~v~aGt~v~~------~~t~~g~~~~~~~~~~--- 228 (831)
+.+++||.+++ ...+.|+.++.+.+..
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~N~~~~~ 319 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAMLNNSGAP 319 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhhcCCCCC
Confidence 23444555444 5667888888776652
Q ss_pred -ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhhch-h------------------------h-----HhhHH---H
Q 003313 229 -VVGHFQQVLTSIGNFCICFITVGMILEIIVM--FPIQH-R------------------------L-----YRDRI---N 272 (831)
Q Consensus 229 -~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~------------------------~-----~~~~l---~ 272 (831)
+.+++++.++++..+++++.++.+++..++. |.... . . +...+ .
T Consensus 320 ~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~li 399 (1178)
T PLN03190 320 SKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVI 399 (1178)
T ss_pred CCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHHHH
Confidence 6789999999988765444333222222211 11000 0 0 00000 0
Q ss_pred ----HHHHHHH--------HHHHhhhcC----------ceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeec
Q 003313 273 ----MLSVTLA--------IASYRLSQR----------GAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVF 330 (831)
Q Consensus 273 ----~l~~~l~--------~~~~~l~~~----------~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~ 330 (831)
++|++|. .-...+.++ ++.||+.+..|+||+|++||+|||||||+|+|+++++.+++.
T Consensus 400 l~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~ 479 (1178)
T PLN03190 400 VFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGV 479 (1178)
T ss_pred HHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCE
Confidence 1222211 112333332 378999999999999999999999999999999999876321
Q ss_pred CCC-----------------------------C------------C-h-----HHHHH-HHHHhccc-------------
Q 003313 331 NRD-----------------------------M------------D-K-----DILVL-LAARASRL------------- 349 (831)
Q Consensus 331 ~~~-----------------------------~------------~-~-----~~~l~-~a~~~~~~------------- 349 (831)
.++ . + + .+++. ++.|++..
T Consensus 480 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~ 559 (1178)
T PLN03190 480 DYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVK 559 (1178)
T ss_pred EcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcccc
Confidence 000 0 0 0 11233 33333221
Q ss_pred ----cCCChHHHHHHHHhCCh----------------HHHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHH
Q 003313 350 ----ENQDAIDAAIINMLADP----------------KEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQ 409 (831)
Q Consensus 350 ----~~~~~~~~ai~~~~~~~----------------~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~ 409 (831)
...+|.|.|++.++... ...+..|++++.+||+|+|||||+++++++|++++++|||||.
T Consensus 560 ~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~ 639 (1178)
T PLN03190 560 LMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTS 639 (1178)
T ss_pred ceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHH
Confidence 11279999999987432 1245678999999999999999999998888889999999999
Q ss_pred HhhhccCc--hhhHHHHHHHHHHHHhccCeeeeeeeecCCCCC-------------------------CCCCCCCceeee
Q 003313 410 ILNMCQEK--EEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMT-------------------------EDSPGGPRSFCG 462 (831)
Q Consensus 410 i~~~~~~~--~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~-------------------------~~~~e~~l~~lG 462 (831)
|+++|... ++.++++.+++++++++|+|||++|||.+++++ .+++|+||+++|
T Consensus 640 il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG 719 (1178)
T PLN03190 640 MFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILG 719 (1178)
T ss_pred HHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEE
Confidence 99999742 345777889999999999999999999986431 135789999999
Q ss_pred eccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCc--------------------------
Q 003313 463 LLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSS-------------------------- 516 (831)
Q Consensus 463 ~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~-------------------------- 516 (831)
+++++|++|++++++|++|+++||++||+|||+.+||.+||++|||..+....-
T Consensus 720 ~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~ 799 (1178)
T PLN03190 720 ASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTT 799 (1178)
T ss_pred EEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccc
Confidence 999999999999999999999999999999999999999999999965432110
Q ss_pred ---------------------cccCCcCCCCC----cccHHHHHHhcC--cEEEeChHHHHHHHHHHhhc-CCEEEEEcC
Q 003313 517 ---------------------LLLGRDKDENE----ALPVDELIEKAD--GFTDVFAEHKYEIVKILQEK-KHVVGMTGD 568 (831)
Q Consensus 517 ---------------------~~~~~~~~~~~----~~~~~~~~~~~~--v~~~~~P~~K~~iv~~l~~~-g~~v~~iGD 568 (831)
++.|..++... .+.+.+++.+++ +|||++|+||+++|+.+|+. +++|+|+||
T Consensus 800 ~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGD 879 (1178)
T PLN03190 800 VSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGD 879 (1178)
T ss_pred cccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECC
Confidence 11111111111 123455566666 69999999999999999997 589999999
Q ss_pred CccChhhhccCCeeEEe-c-CchHHHhhhcCEEEeCCChhHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 569 GVNDAPALKKADIGIAV-A-GATEAARGAADIVLTEPGLSVICSAV-LTSRTVFQIMKNCMIHAVSITIHIVLSFVLLAL 645 (831)
Q Consensus 569 G~ND~~al~~AdvgIa~-~-~~~~~a~~aadivl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~ 645 (831)
|+||++||++|||||++ | +|. .|..+||+.+. .|+.+.+++ .|||+.|+|+.+.+.|.+++|+..++..+++.+
T Consensus 880 GaNDv~mIq~AdVGIGIsG~EG~-qA~~aSDfaI~--~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~ 956 (1178)
T PLN03190 880 GANDVSMIQMADVGVGISGQEGR-QAVMASDFAMG--QFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVL 956 (1178)
T ss_pred CcchHHHHHhcCeeeeecCchhH-HHHHhhccchh--hhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987 3 344 56679999995 599999988 699999999999999999999998888888877
Q ss_pred hccCC----CChHHHHHHHH-hhccchhcc-ccCCCCCC----CCC--------CccchHHHHHHHHHHHHHHHHHHHHH
Q 003313 646 IWEYD----FPPFMVLIIAV-LNDGTIITI-SKGRVKSS----LRP--------DGWKLNEIFAAGIVIGNYLALVTILF 707 (831)
Q Consensus 646 ~~~~~----~~~~~~l~~~~-~~~~~~~~l-~~~~~~~~----~~~--------~~~~~~~~~~~~~~~g~~~~~~~~~~ 707 (831)
+.++. +.++.+.++|+ ++.+|.+.+ .+|+.-+. ..| .+....+.|+.+++.|++++++.|++
T Consensus 957 ~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~ 1036 (1178)
T PLN03190 957 FTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFV 1036 (1178)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHHH
Confidence 76653 34445555554 556666776 34544332 111 11222345666777899999988865
Q ss_pred HHHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHHHHH-hhhhccCCCCCCcCchHHHHHHHHHHHHHHHHHHHh--
Q 003313 708 YWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQAL-IFVTRSQSWSFLERPGALLMCAFVLAQLVATLIAVY-- 784 (831)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-- 784 (831)
.++.+.... .+. ....+.+++.+++...+. ++.+++ |+|.... .+++++++..++..++...
T Consensus 1037 ~~~~~~~~~----~~~-------~~~~~~~~~~~v~~vnl~i~~~~~~--wt~~~~~--~i~~Si~~~~i~~~~~~~~~~ 1101 (1178)
T PLN03190 1037 PLFAYWAST----IDG-------SSIGDLWTLAVVILVNLHLAMDIIR--WNWITHA--AIWGSIVATFICVIVIDAIPT 1101 (1178)
T ss_pred HHHHhcCCC----cCc-------eeEhHhhhhHHHHHHHHHHHHHHhh--hhHHHHH--HHHHHHHHHHHHHHHHHhccc
Confidence 554442211 110 111234444444444443 333444 3322211 1112222111111111100
Q ss_pred -hh-cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccC
Q 003313 785 -AH-ISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVRTLSREAWN 830 (831)
Q Consensus 785 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~k~~~r~~~~~~w~ 830 (831)
.. +.++.+ ...+.+|+.+++..++.++++-++|.+.|.+.|+.++
T Consensus 1102 ~~~~~~~~~~-~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~ 1148 (1178)
T PLN03190 1102 LPGYWAIFHI-AKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQ 1148 (1178)
T ss_pred chhHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 00 111111 1134466666777778888888999999977776553
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-85 Score=757.45 Aligned_cols=512 Identities=21% Similarity=0.279 Sum_probs=420.9
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCC-------CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-eEEE
Q 003313 71 SFMWNPLSWVMETAALMAIALANGG-------GQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTP-KTKV 142 (831)
Q Consensus 71 ~~~~~~~~~~l~i~ail~~~~~~~~-------~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~-~~~V 142 (831)
.+|+||+.++++++++++++++... .....|..++.+++.++++..++.++|+|+++.+++|+++.+. +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 5799999999999999999876311 1113455556666667778888889999999999999998875 7999
Q ss_pred EECCE-EEEEeCCCcCCCcEEEEcCCCccccceEEEecCCeEEEcccccCCCccccccCCCe---eeecceeee------
Q 003313 143 LRDGQ-WKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETGDE---VFSGLTCKH------ 212 (831)
Q Consensus 143 ~rdg~-~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g~~---v~aGt~v~~------ 212 (831)
+|||+ +++|++++|+|||+|.+++||+|||||+|++| .+.||||+|||||.|+.|++|+. ||+||.+.+
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG-~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~ 187 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIR 187 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEc-cEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEE
Confidence 99988 89999999999999999999999999999999 68999999999999999999988 999999987
Q ss_pred -----ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-hhhHhhHHH------------H
Q 003313 213 -----VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQ-HRLYRDRIN------------M 273 (831)
Q Consensus 213 -----~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~------------~ 273 (831)
.+|.+|++.+++++++ +++|+|...+.+...+..++++.++..+++.+... ...+...+. .
T Consensus 188 Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~~g~~~~l~~~iallV~aiP~alg~l 267 (679)
T PRK01122 188 ITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAYSGGALSITVLVALLVCLIPTTIGGL 267 (679)
T ss_pred EEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHcccchhhhH
Confidence 7999999999998874 78999987777655433222221111111111110 111111111 2
Q ss_pred HHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCC
Q 003313 274 LSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQD 353 (831)
Q Consensus 274 l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~ 353 (831)
+++....|+.||+|+|+++|++.++|++|++|++|||||||||+|+|++.++.. ..+.+.++++..++.++..++ |
T Consensus 268 ~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~s~-h 343 (679)
T PRK01122 268 LSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLADE-T 343 (679)
T ss_pred HHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCCCC-C
Confidence 333445689999999999999999999999999999999999999999998753 234667778888887776665 8
Q ss_pred hHHHHHHHHhCCh---HHHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccCc-hhhHHHHHHHHH
Q 003313 354 AIDAAIINMLADP---KEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEK-EEIGGKVHEIIN 429 (831)
Q Consensus 354 ~~~~ai~~~~~~~---~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~-~~~~~~~~~~~~ 429 (831)
|.++|+++++... ......++..+.+||++.++++++.+ +| ..++||++|.+++.|... .+.++++++..+
T Consensus 344 P~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~ 418 (679)
T PRK01122 344 PEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDAAVD 418 (679)
T ss_pred chHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHHHHH
Confidence 9999999886431 11112245677899999988887653 34 578999999999999642 234567788888
Q ss_pred HHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 003313 430 KLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIG 509 (831)
Q Consensus 430 ~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~ 509 (831)
+++++|.|++++|++. +++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++||+
T Consensus 419 ~~a~~G~~~l~va~~~-------------~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId 485 (679)
T PRK01122 419 EVARKGGTPLVVAEDN-------------RVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD 485 (679)
T ss_pred HHHhCCCcEEEEEECC-------------eEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc
Confidence 9999999999999754 899999999999999999999999999999999999999999999999995
Q ss_pred CCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCch
Q 003313 510 TNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGAT 589 (831)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~ 589 (831)
. +++|++||||.++|+.+|++|+.|+|+|||+||+|||++||||||||+|+
T Consensus 486 ~-----------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGT 536 (679)
T PRK01122 486 D-----------------------------FLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGT 536 (679)
T ss_pred E-----------------------------EEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCC
Confidence 2 69999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 003313 590 EAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITI 634 (831)
Q Consensus 590 ~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni 634 (831)
|+||++||+|++||||++|++++++||++.-.--....|.+..-+
T Consensus 537 dvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 537 QAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred HHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 999999999999999999999999999998555555667766444
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-85 Score=737.18 Aligned_cols=676 Identities=21% Similarity=0.298 Sum_probs=499.8
Q ss_pred HHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHH
Q 003313 29 EVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKPENKFLKFLSFMWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIV 108 (831)
Q Consensus 29 ~~~~~l~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~i~ail~~~~~~~~~~~~~~~~~~~i~ 108 (831)
+.+........||+.+++.+|+..||+|.+..+.++.+..++++..+||+.+. +.++..|... .+++++..|+
T Consensus 149 ~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~PfYlFQ-~fSv~lW~~d------~Y~~YA~cI~ 221 (1140)
T KOG0208|consen 149 RWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPFYLFQ-AFSVALWLAD------SYYYYAFCIV 221 (1140)
T ss_pred hhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchHHHHH-hHHhhhhhcc------cchhhhhHHH
Confidence 34444444578999999999999999999999999999999999999995544 4444444432 3566677778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcC-CCccccceEEEecCCeEEEcc
Q 003313 109 CLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKF-GDVIPADARLLEGDPLKIDQS 187 (831)
Q Consensus 109 ~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~-G~~iPaDg~ll~g~~~~Vdes 187 (831)
++.+.+...+.++.++..+.++++-+ ....|+|+|||.|++|+++|||||||+.+.+ |-..|||+++++| +|.||||
T Consensus 222 iisv~Si~~sv~e~r~qs~rlr~mv~-~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g-~civNEs 299 (1140)
T KOG0208|consen 222 IISVYSIVLSVYETRKQSIRLRSMVK-FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISG-DCIVNES 299 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeC-cEEeecc
Confidence 88888888899999999888877654 4578999999999999999999999999998 9999999999999 7999999
Q ss_pred cccCCCccccccCC-------------------Ceeeecceeee-----------------ccchhhhHHHhhhccC-cc
Q 003313 188 ELTGESLTVTKETG-------------------DEVFSGLTCKH-----------------VHSFFGKAADLVDSTE-VV 230 (831)
Q Consensus 188 ~LTGEs~pv~K~~g-------------------~~v~aGt~v~~-----------------~~t~~g~~~~~~~~~~-~~ 230 (831)
+|||||.|+.|.+- +.+|.||.+.+ -+|.-|++.+.+...+ ..
T Consensus 300 mLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~ 379 (1140)
T KOG0208|consen 300 MLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVN 379 (1140)
T ss_pred cccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcc
Confidence 99999999999863 47999999987 2344455555444333 11
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHhh----HHH------------HHHHHHHHHHHhhhcCceEEcc
Q 003313 231 GHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRD----RIN------------MLSVTLAIASYRLSQRGAITKR 294 (831)
Q Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~------------~l~~~l~~~~~~l~~~~ilvk~ 294 (831)
.++-+-.-++...+.++..++++...+. +...+.+... ++. .+++...++..||.|+||.|-+
T Consensus 380 fkfyrds~~fi~~l~~ia~~gfiy~~i~-l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCis 458 (1140)
T KOG0208|consen 380 FKFYRDSFKFILFLVIIALIGFIYTAIV-LNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCIS 458 (1140)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhHh-HHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcC
Confidence 2222222222222222222222221111 1112222221 111 4555666788999999999999
Q ss_pred chhhhhhcCceEEEecCCCccccCceEEEEEeeeecC---C---------------------CCCh--HHHHHHHHHhcc
Q 003313 295 MTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFN---R---------------------DMDK--DILVLLAARASR 348 (831)
Q Consensus 295 ~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~---~---------------------~~~~--~~~l~~a~~~~~ 348 (831)
++.+...|+++++|||||||||++.+.+..+.....+ . ...+ ......|.|++-
T Consensus 459 P~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL 538 (1140)
T KOG0208|consen 459 PQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSL 538 (1140)
T ss_pred ccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhcee
Confidence 9999999999999999999999999999887641100 0 0001 122333334321
Q ss_pred c-----cCCChHHHHHHHHhC------------------------ChHH--------H-hhccceeEEecCCCCCceEEE
Q 003313 349 L-----ENQDAIDAAIINMLA------------------------DPKE--------A-RANINEVHFLPFNPVDKRTAI 390 (831)
Q Consensus 349 ~-----~~~~~~~~ai~~~~~------------------------~~~~--------~-~~~~~~l~~~~f~s~~k~~sv 390 (831)
. -.+||+|..+.+..+ +|.+ . ...+.+++.+||+|.-+||||
T Consensus 539 ~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSV 618 (1140)
T KOG0208|consen 539 TLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSV 618 (1140)
T ss_pred EEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEE
Confidence 1 135788776654321 0100 0 114678899999999999999
Q ss_pred EEEcC-CCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCC--------CCCCCCCCceee
Q 003313 391 TYTDS-EGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEM--------TEDSPGGPRSFC 461 (831)
Q Consensus 391 ~v~~~-~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~--------~~~~~e~~l~~l 461 (831)
++.++ +.+.++|+|||||.|.+.|+. +.++.++++.++.|+.+|+|++|+|+|.++.. .|+.+|+||+|+
T Consensus 619 Iv~~~~e~~~~~ftKGaPE~I~~ic~p-~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~Fl 697 (1140)
T KOG0208|consen 619 IVSTGGEDKMMVFTKGAPESIAEICKP-ETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFL 697 (1140)
T ss_pred EEecCCCCceEeeccCCHHHHHHhcCc-ccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceee
Confidence 99864 467789999999999999986 57899999999999999999999999999765 478899999999
Q ss_pred eeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCC-------------------------c
Q 003313 462 GLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPS-------------------------S 516 (831)
Q Consensus 462 G~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~-------------------------~ 516 (831)
|++.||+++|++++.+|++|.+++|+++|+||||..||..+||+||+..+.... +
T Consensus 698 GLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~ 777 (1140)
T KOG0208|consen 698 GLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQ 777 (1140)
T ss_pred EEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccc
Confidence 999999999999999999999999999999999999999999999996532100 0
Q ss_pred cccCCcCCC-------------------------------CCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEE
Q 003313 517 LLLGRDKDE-------------------------------NEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGM 565 (831)
Q Consensus 517 ~~~~~~~~~-------------------------------~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~ 565 (831)
.....+.+. ...+.++.++.+..|||||+|+||.++|+.+|+.|+.|+|
T Consensus 778 ~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~Vgf 857 (1140)
T KOG0208|consen 778 FLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGF 857 (1140)
T ss_pred cCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEe
Confidence 000000000 0123466777788999999999999999999999999999
Q ss_pred EcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 566 TGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLAL 645 (831)
Q Consensus 566 iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~ 645 (831)
||||+|||.|||+|||||+++.+. |.-||.++-.-.+.+.++..|++||+..-.--..++|...|.+..+...+. .+
T Consensus 858 CGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~-LY 934 (1140)
T KOG0208|consen 858 CGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVF-LY 934 (1140)
T ss_pred cCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhhe-ee
Confidence 999999999999999999998654 566899998888999999999999999999999999999888866544332 23
Q ss_pred hccCCCChHHHHHHHHhhccc-hhccccCC----CCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 003313 646 IWEYDFPPFMVLIIAVLNDGT-IITISKGR----VKSSLRPDGWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFE 718 (831)
Q Consensus 646 ~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 718 (831)
..+..++.+|.+++.++...+ +..++..+ ..+.+.|.++..++++.-.+.+-++..++-+..+++.....|+.
T Consensus 935 ~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~ 1012 (1140)
T KOG0208|consen 935 LINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRPPTNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYE 1012 (1140)
T ss_pred eecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCCCccccccchhhhhHHHHHHHHHHHHhhheeecccccee
Confidence 456789999999999887655 44444433 22334444454555555555544445555555555554445544
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-81 Score=723.34 Aligned_cols=514 Identities=21% Similarity=0.272 Sum_probs=421.4
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcC---CC---CCCchhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-eE
Q 003313 71 SFMWNPLSWVMETAALMAIALANG---GG---QGPDWQDS---VGIVCLLIINSSISFIEESNAENATAALMAHLTP-KT 140 (831)
Q Consensus 71 ~~~~~~~~~~l~i~ail~~~~~~~---~~---~~~~~~~~---~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~-~~ 140 (831)
.||.||+.++++++++++++++.. .+ ....|+++ +.+++.++++..++.++|+|+++++++|++..++ .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 579999999999999999997531 11 11236664 3344556778888899999999999999998876 48
Q ss_pred EEEE-CCEEEEEeCCCcCCCcEEEEcCCCccccceEEEecCCeEEEcccccCCCccccccCCCe---eeecceeee----
Q 003313 141 KVLR-DGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETGDE---VFSGLTCKH---- 212 (831)
Q Consensus 141 ~V~r-dg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g~~---v~aGt~v~~---- 212 (831)
+|+| ||++++|++++|+|||+|.+++||+|||||+|++| .+.||||+|||||.|+.|++|+. ||+||.+.+
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG-VASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-cEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8885 89999999999999999999999999999999999 79999999999999999999974 999999887
Q ss_pred -------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhh--HhhHHH----------
Q 003313 213 -------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRL--YRDRIN---------- 272 (831)
Q Consensus 213 -------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~---------- 272 (831)
.+|++|++.+++++++ +++|+|...+.+..++.+++++..+..+.+. .+.... +...+.
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~-~~~~~~~~~~~lvallV~aiP~aL 265 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATLWPFA-AYGGNAISVTVLVALLVCLIPTTI 265 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcChhHHHHHHHHHHHHhCchhh
Confidence 7999999999998875 6899998877766553322222111111111 011111 111111
Q ss_pred --HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhcccc
Q 003313 273 --MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLE 350 (831)
Q Consensus 273 --~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~ 350 (831)
..+.....|+.||+|+|+++|++.++|++|++|++|||||||||+|+|++.++.. ..+.+.++++..++.++..+
T Consensus 266 g~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~~~s 342 (675)
T TIGR01497 266 GGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLASLAD 342 (675)
T ss_pred hhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhcCCC
Confidence 1122224588999999999999999999999999999999999999999998763 23556778888888877665
Q ss_pred CCChHHHHHHHHhCChHH--HhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccCc-hhhHHHHHHH
Q 003313 351 NQDAIDAAIINMLADPKE--ARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEK-EEIGGKVHEI 427 (831)
Q Consensus 351 ~~~~~~~ai~~~~~~~~~--~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~-~~~~~~~~~~ 427 (831)
+ ||.++|++.++..... ....++..+..||++.++++++.+. +| ..++||++|.+++.|... ...+.++++.
T Consensus 343 ~-hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~ 417 (675)
T TIGR01497 343 D-TPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQA 417 (675)
T ss_pred C-CcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHH
Confidence 4 9999999987643211 1112345678999999877765433 45 568999999999888532 2345667888
Q ss_pred HHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC
Q 003313 428 INKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLG 507 (831)
Q Consensus 428 ~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~g 507 (831)
+++++++|.|++++|++. +++|+++++||+|||++++|++||++|++++|+|||+..+|.++|+++|
T Consensus 418 ~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lG 484 (675)
T TIGR01497 418 VDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAG 484 (675)
T ss_pred HHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC
Confidence 889999999999999864 8999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecC
Q 003313 508 IGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAG 587 (831)
Q Consensus 508 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~ 587 (831)
++. ++++++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||++
T Consensus 485 I~~-----------------------------v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~~ 535 (675)
T TIGR01497 485 VDD-----------------------------FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNS 535 (675)
T ss_pred CCE-----------------------------EEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCC
Confidence 952 699999999999999999999999999999999999999999999999
Q ss_pred chHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 003313 588 ATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHI 636 (831)
Q Consensus 588 ~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~ 636 (831)
|+++++++||++++||||++|++++++||+++-+......|.++..+.-
T Consensus 536 gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~ 584 (675)
T TIGR01497 536 GTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAK 584 (675)
T ss_pred CCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHH
Confidence 9999999999999999999999999999999999999999988877753
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-80 Score=712.50 Aligned_cols=480 Identities=26% Similarity=0.373 Sum_probs=405.6
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEE-CCEEEEEeCCCcCCCcEEEEcCCCccccceEEEe
Q 003313 100 DWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLR-DGQWKEQDAAVLVPGDIISIKFGDVIPADARLLE 178 (831)
Q Consensus 100 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r-dg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~ 178 (831)
+|.+++++++++.++..++.+...|+++++++|.++.|.++++++ ||++++|+.++|++||+|.|+|||+||+||+|++
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~ 252 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe
Confidence 447788889999999999999999999999999999999997776 5668999999999999999999999999999999
Q ss_pred cCCeEEEcccccCCCccccccCCCeeeecceeee-----------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHHHH
Q 003313 179 GDPLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCIC 246 (831)
Q Consensus 179 g~~~~Vdes~LTGEs~pv~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~ 246 (831)
| ...||||+|||||.|+.|.+||.|++||.+.+ .+|.++++.+++++++ .++|.|+.+|+++.++..
T Consensus 253 G-~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp 331 (713)
T COG2217 253 G-SSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVP 331 (713)
T ss_pred C-cEEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHH
Confidence 9 67899999999999999999999999999887 7899999999999885 899999999999998766
Q ss_pred HHHHHHHHHHHHHhhhchhhHh----hHHH------------HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEec
Q 003313 247 FITVGMILEIIVMFPIQHRLYR----DRIN------------MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSV 310 (831)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~----~~l~------------~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~D 310 (831)
.+++..++.+++++......|. .++. ..|+++..++.+++|+|+++|+.+++|.++++|+++||
T Consensus 332 ~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFD 411 (713)
T COG2217 332 VVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFD 411 (713)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEe
Confidence 4444344433333332222333 3332 34566777899999999999999999999999999999
Q ss_pred CCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhccceeEEecCCCCCceEEE
Q 003313 311 KTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAI 390 (831)
Q Consensus 311 KTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sv 390 (831)
||||||+|+|+|+++.. . .+ ++++++.+++..+..++ ||+++|+++++.... ....+..+.+|- +....
T Consensus 412 KTGTLT~G~p~v~~v~~--~-~~-~e~~~L~laAalE~~S~-HPiA~AIv~~a~~~~--~~~~~~~~~i~G----~Gv~~ 480 (713)
T COG2217 412 KTGTLTEGKPEVTDVVA--L-DG-DEDELLALAAALEQHSE-HPLAKAIVKAAAERG--LPDVEDFEEIPG----RGVEA 480 (713)
T ss_pred CCCCCcCCceEEEEEec--C-CC-CHHHHHHHHHHHHhcCC-ChHHHHHHHHHHhcC--CCCccceeeecc----CcEEE
Confidence 99999999999999773 2 23 78899999999888877 999999999765322 111222333331 11111
Q ss_pred EEEcCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCC
Q 003313 391 TYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPP 470 (831)
Q Consensus 391 ~v~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~l 470 (831)
. .+| ..+..|+++.+.+.-. +... ..+..+.+.++|..++.++.++ +++|+++++|++
T Consensus 481 ~---v~g--~~v~vG~~~~~~~~~~---~~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~ 538 (713)
T COG2217 481 E---VDG--ERVLVGNARLLGEEGI---DLPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADEL 538 (713)
T ss_pred E---ECC--EEEEEcCHHHHhhcCC---Cccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCC
Confidence 1 255 5667899998754211 1111 4556678888999999999987 899999999999
Q ss_pred CCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHH
Q 003313 471 RHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKY 550 (831)
Q Consensus 471 r~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~ 550 (831)
|++++++|++||+.|++++|+||||..+|.++|+++||+. +++++.||||.
T Consensus 539 R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~-----------------------------v~AellPedK~ 589 (713)
T COG2217 539 RPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE-----------------------------VRAELLPEDKA 589 (713)
T ss_pred ChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh-----------------------------heccCCcHHHH
Confidence 9999999999999999999999999999999999999953 79999999999
Q ss_pred HHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHH
Q 003313 551 EIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAV 630 (831)
Q Consensus 551 ~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l 630 (831)
++|+.+|++|++|+|+|||+||+|||++||||||||+|+|+|+++||+++++|++..++++++.+|+++++||+|+.|++
T Consensus 590 ~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~ 669 (713)
T COG2217 590 EIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAF 669 (713)
T ss_pred HHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 003313 631 SITIHIVLSFVL 642 (831)
Q Consensus 631 ~~ni~~~~~~~~ 642 (831)
.||...++...+
T Consensus 670 ~yn~~~iplA~~ 681 (713)
T COG2217 670 GYNAIAIPLAAG 681 (713)
T ss_pred HHHHHHHHHHHH
Confidence 999876555443
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-76 Score=662.20 Aligned_cols=515 Identities=23% Similarity=0.317 Sum_probs=423.4
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCE-EEEEeCCCcCCCcEEEEcCCCccccceEE
Q 003313 98 GPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQ-WKEQDAAVLVPGDIISIKFGDVIPADARL 176 (831)
Q Consensus 98 ~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~-~~~i~~~~lv~GDiI~l~~G~~iPaDg~l 176 (831)
...|.++.+++.++.++..++.....|+..++.+|.++.|.++.++.+|+ +++|+.+.|++||+|.|.||++||+||+|
T Consensus 338 ~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~V 417 (951)
T KOG0207|consen 338 PTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVV 417 (951)
T ss_pred chhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEE
Confidence 34455677777888889999999999999999999999999999999996 89999999999999999999999999999
Q ss_pred EecCCeEEEcccccCCCccccccCCCeeeecceeee-----------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHH
Q 003313 177 LEGDPLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFC 244 (831)
Q Consensus 177 l~g~~~~Vdes~LTGEs~pv~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~ 244 (831)
++| +++||||++|||++||.|++|+.|.+||.+.+ .++.+++|.+++++++ .++|+|+.+|+++.++
T Consensus 418 v~G-ss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yF 496 (951)
T KOG0207|consen 418 VDG-SSEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYF 496 (951)
T ss_pred EeC-ceeechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcC
Confidence 999 68999999999999999999999999998877 7889999999999986 8899999999999986
Q ss_pred HHHHHHHHHHHHHHHhhhch----------hhHhhHHH----H------------HHHHHHHHHHhhhcCceEEccchhh
Q 003313 245 ICFITVGMILEIIVMFPIQH----------RLYRDRIN----M------------LSVTLAIASYRLSQRGAITKRMTAI 298 (831)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~l~----~------------l~~~l~~~~~~l~~~~ilvk~~~~l 298 (831)
..++++..++.++++..+.. ..+..++. + .|++...|....+++|+++|..+++
T Consensus 497 vP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~L 576 (951)
T KOG0207|consen 497 VPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEAL 576 (951)
T ss_pred CchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHH
Confidence 55544444443333332211 11111111 1 1122234567889999999999999
Q ss_pred hhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhccceeEE
Q 003313 299 EEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHF 378 (831)
Q Consensus 299 e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~ 378 (831)
|.+.++++++||||||||+|++.|.++.. ..+..+..+++.+++..+..+. ||+.+|+++++.........-....+
T Consensus 577 E~~hkv~tVvFDKTGTLT~G~~~V~~~~~--~~~~~~~~e~l~~v~a~Es~Se-HPig~AIv~yak~~~~~~~~~~~~~~ 653 (951)
T KOG0207|consen 577 EKAHKVKTVVFDKTGTLTEGKPTVVDFKS--LSNPISLKEALALVAAMESGSE-HPIGKAIVDYAKEKLVEPNPEGVLSF 653 (951)
T ss_pred HHHhcCCEEEEcCCCceecceEEEEEEEe--cCCcccHHHHHHHHHHHhcCCc-CchHHHHHHHHHhcccccCcccccee
Confidence 99999999999999999999999998774 3333677788887777766665 99999999998643311111112222
Q ss_pred ecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCc
Q 003313 379 LPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPR 458 (831)
Q Consensus 379 ~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l 458 (831)
-.|..+.....+. .+|+. ++.|+.+.+... ....++.+++.+++...+|..+.+++..+
T Consensus 654 ~~~pg~g~~~~~~---~~~~~--i~iGN~~~~~r~---~~~~~~~i~~~~~~~e~~g~tvv~v~vn~------------- 712 (951)
T KOG0207|consen 654 EYFPGEGIYVTVT---VDGNE--VLIGNKEWMSRN---GCSIPDDILDALTESERKGQTVVYVAVNG------------- 712 (951)
T ss_pred ecccCCCcccceE---EeeeE--EeechHHHHHhc---CCCCchhHHHhhhhHhhcCceEEEEEECC-------------
Confidence 2233333221221 13433 778999887642 22345567788888889999999999988
Q ss_pred eeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhc
Q 003313 459 SFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKA 538 (831)
Q Consensus 459 ~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (831)
+++|++.++|++|+|+..+|+.||+.|++++|+||||..+|+++|+++|++
T Consensus 713 ~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~----------------------------- 763 (951)
T KOG0207|consen 713 QLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID----------------------------- 763 (951)
T ss_pred EEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc-----------------------------
Confidence 999999999999999999999999999999999999999999999999975
Q ss_pred CcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHH
Q 003313 539 DGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTV 618 (831)
Q Consensus 539 ~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~ 618 (831)
+|+|++.|+||.++|+.+|++++.|+|+|||+||+|||.+|||||+||.|+++|.++||+|+++||+..++.+++.+|++
T Consensus 764 ~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt 843 (951)
T KOG0207|consen 764 NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKT 843 (951)
T ss_pred eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHHH
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHhhccc
Q 003313 619 FQIMKNCMIHAVSITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGT 666 (831)
Q Consensus 619 ~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 666 (831)
.+|+|.|+.|++.||+..++...+.++.+++.++|+.--....++...
T Consensus 844 ~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSvs 891 (951)
T KOG0207|consen 844 VKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSVS 891 (951)
T ss_pred HhhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhHH
Confidence 999999999999999988888888877777778887665555555443
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-74 Score=685.62 Aligned_cols=473 Identities=25% Similarity=0.331 Sum_probs=399.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEEec
Q 003313 100 DWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEG 179 (831)
Q Consensus 100 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g 179 (831)
.|.++++++++++++..++.++++|+++.+++|+++.|++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 67888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEcccccCCCccccccCCCeeeecceeee-----------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHHHHH
Q 003313 180 DPLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCICF 247 (831)
Q Consensus 180 ~~~~Vdes~LTGEs~pv~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~ 247 (831)
+..||||+|||||.|+.|.+||.||+||.+.+ .+|.+|++.+++++++ .++|+|+.++++++++..+
T Consensus 285 -~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 -FASFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred -cEEeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999876 7889999999998875 7899999999999986655
Q ss_pred HHHHHHHHHHHHhhhchhhHh----hHHH------------HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEecC
Q 003313 248 ITVGMILEIIVMFPIQHRLYR----DRIN------------MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVK 311 (831)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~----~~l~------------~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DK 311 (831)
+++..++.+++++.+....|. .++. ..++++..++.+++|+|+++|+++++|++++++++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 544344333333222222222 2222 124556678889999999999999999999999999999
Q ss_pred CCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhccceeEEecCCCCCceEEEE
Q 003313 312 TAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAIT 391 (831)
Q Consensus 312 TGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sv~ 391 (831)
|||||+|+|+|.++.. ..+.++++++.+++..+..+ .||+++|+++++... +. .+||.++.+.+.-.
T Consensus 444 TGTLT~g~~~v~~~~~---~~~~~~~~~l~~aa~~e~~s-~hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIHP---ATGISESELLALAAAVEQGS-THPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEEe---cCCCCHHHHHHHHHHHhcCC-CCHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 9999999999998763 23467778888887766554 499999999886421 11 24666666655321
Q ss_pred -EE-cCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCC
Q 003313 392 -YT-DSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDP 469 (831)
Q Consensus 392 -v~-~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~ 469 (831)
++ ..+|+. +..|+++.+.+ ..+++.+.++++.++|+|+++++++. +++|+++++|+
T Consensus 511 Gv~~~~~g~~--~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGER--VLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCEE--EEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 22 235643 45689988754 12334455678889999999999865 89999999999
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHH
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHK 549 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K 549 (831)
+|+|++++|++|+++|++++|+|||+..+|.++|+++||. .+++++|+||
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~------------------------------~~~~~~p~~K 618 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID------------------------------FRAGLLPEDK 618 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC------------------------------eecCCCHHHH
Confidence 9999999999999999999999999999999999999994 3678899999
Q ss_pred HHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHH
Q 003313 550 YEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHA 629 (831)
Q Consensus 550 ~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 629 (831)
.++|+.+|+. +.|+|+|||.||+|||++||||||||+|++.++++||++++++++..+..++++||++++||++|+.|+
T Consensus 619 ~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a 697 (741)
T PRK11033 619 VKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIA 697 (741)
T ss_pred HHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999965 589999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 003313 630 VSITIHIVLS 639 (831)
Q Consensus 630 l~~ni~~~~~ 639 (831)
+.+|+..+..
T Consensus 698 ~~~n~~~i~~ 707 (741)
T PRK11033 698 LGLKAIFLVT 707 (741)
T ss_pred HHHHHHHHHH
Confidence 9999855443
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-70 Score=600.82 Aligned_cols=644 Identities=22% Similarity=0.258 Sum_probs=458.6
Q ss_pred CCcccCCCCCccccCCHHHHHHHhCCCCCCCC-HHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHhHHHHHHHHHHHHHH
Q 003313 11 DPENCNCGGIDLARLPLDEVFGQLGTTRQGLS-SEDAEVRLKFFGSNKLEKKPENKFLKFLSFMWNPLSWVMETAALMAI 89 (831)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs-~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~i~ail~~ 89 (831)
+++++|.+.|.--..+.++....++.. +|+. +.++..-.++||.|.++.+.+++-..|.+....||+ ++++..+..|
T Consensus 134 y~~~~e~~~F~~~~fp~~~~~g~~~k~-~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPfF-VFQVFcvgLW 211 (1160)
T KOG0209|consen 134 YLYDEEKGKFSRLTFPTDEPFGYFQKS-TGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPFF-VFQVFCVGLW 211 (1160)
T ss_pred EEEcccccceeccccCcCCcchhhhhc-cCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCcee-eHhHHhHHHH
Confidence 566777787877788888877776655 4565 345555556699999999999998999999999995 4555555556
Q ss_pred HHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcC---
Q 003313 90 ALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKF--- 166 (831)
Q Consensus 90 ~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~--- 166 (831)
++. .+|+.+++-+++++....--..|+.+.-..++... .-|..+.|.|+++|+.+.++||.|||+|.+..
T Consensus 212 CLD------eyWYySlFtLfMli~fE~tlV~Qrm~~lse~R~Mg-~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~e 284 (1160)
T KOG0209|consen 212 CLD------EYWYYSLFTLFMLIAFEATLVKQRMRTLSEFRTMG-NKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAE 284 (1160)
T ss_pred HhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCceEEEEEecCcceeccccccCCCceEEeccCcc
Confidence 654 48998888777766554444455555544444432 24667899999999999999999999999987
Q ss_pred CCccccceEEEecCCeEEEcccccCCCccccccC-----------------CCeeeecceeee-----------------
Q 003313 167 GDVIPADARLLEGDPLKIDQSELTGESLTVTKET-----------------GDEVFSGLTCKH----------------- 212 (831)
Q Consensus 167 G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~-----------------g~~v~aGt~v~~----------------- 212 (831)
...||||.+++.| +|.|||++|||||.|..|.+ ...+|+||.+.+
T Consensus 285 d~~vPCDllLL~G-sciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~ 363 (1160)
T KOG0209|consen 285 DSHVPCDLLLLRG-SCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCV 363 (1160)
T ss_pred cCcCCceEEEEec-ceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeE
Confidence 6789999999999 79999999999999999976 137999999987
Q ss_pred -------ccchhhhHHHhhhc-cCccCcHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhch-------hhHhhHHH----
Q 003313 213 -------VHSFFGKAADLVDS-TEVVGHFQQVLTSIGNF-CICFITVGMILEIIVMFPIQH-------RLYRDRIN---- 272 (831)
Q Consensus 213 -------~~t~~g~~~~~~~~-~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~---- 272 (831)
-+|.-|+..+.+.- +++.+ +|..-.+ +++++++++++ ..++.+.. ..+...+.
T Consensus 364 a~VlrTGFeTSQGkLvRtilf~aervT-----aNn~Etf~FILFLlVFAia--Aa~Yvwv~Gskd~~RsrYKL~LeC~LI 436 (1160)
T KOG0209|consen 364 AYVLRTGFETSQGKLVRTILFSAERVT-----ANNRETFIFILFLLVFAIA--AAGYVWVEGSKDPTRSRYKLFLECTLI 436 (1160)
T ss_pred EEEEeccccccCCceeeeEEecceeee-----eccHHHHHHHHHHHHHHHH--hhheEEEecccCcchhhhheeeeeeEE
Confidence 23444444433221 22111 1111112 12222221211 11222111 11111110
Q ss_pred ---------H--HHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecC-------CCC
Q 003313 273 ---------M--LSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFN-------RDM 334 (831)
Q Consensus 273 ---------~--l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~-------~~~ 334 (831)
+ ++++...+...++|.+++|..|-.+.-.|++|+.|||||||||+..|.|.++--.... ...
T Consensus 437 lTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~ 516 (1160)
T KOG0209|consen 437 LTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKA 516 (1160)
T ss_pred EeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhC
Confidence 2 3444445677899999999999999999999999999999999999999985421001 112
Q ss_pred ChHHHHHHHHHhccc-----cCCChHHHHHHHHhCChHH----------HhhccceeEEecCCCCCceEEEEEEcC----
Q 003313 335 DKDILVLLAARASRL-----ENQDAIDAAIINMLADPKE----------ARANINEVHFLPFNPVDKRTAITYTDS---- 395 (831)
Q Consensus 335 ~~~~~l~~a~~~~~~-----~~~~~~~~ai~~~~~~~~~----------~~~~~~~l~~~~f~s~~k~~sv~v~~~---- 395 (831)
..+.+..+|+|++-. --+||+|+|.++..+-.-+ ...+.++.+.+.|+|.-||||++....
T Consensus 517 p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~ 596 (1160)
T KOG0209|consen 517 PNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGS 596 (1160)
T ss_pred CchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCC
Confidence 334566666665422 2369999999998742111 112467788899999999999887532
Q ss_pred CCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCC--------CCCCCCCCceeeeecccc
Q 003313 396 EGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEM--------TEDSPGGPRSFCGLLPLF 467 (831)
Q Consensus 396 ~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~--------~~~~~e~~l~~lG~i~~~ 467 (831)
+-+++..+|||||.|.++.. +++..+++...+++++|.||+|++||.+++. +++++|++|+|.|++.|.
T Consensus 597 s~k~~~aVKGAPEvi~~ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~ 673 (1160)
T KOG0209|consen 597 SEKYFVAVKGAPEVIQEMLR---DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFS 673 (1160)
T ss_pred ceEEEEEecCCHHHHHHHHH---hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEe
Confidence 13678889999999998775 5788899999999999999999999998732 478999999999999999
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC-------------------CCcc-c---------
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY-------------------PSSL-L--------- 518 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~-------------------~~~~-~--------- 518 (831)
-|+|+|++++|++|++++++++|+||||+.||.++|+++||..... ++.. +
T Consensus 674 CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~ 753 (1160)
T KOG0209|consen 674 CPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKT 753 (1160)
T ss_pred CCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccch
Confidence 9999999999999999999999999999999999999999965311 0000 0
Q ss_pred ----------cCCcCCCC-CcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecC
Q 003313 519 ----------LGRDKDEN-EALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAG 587 (831)
Q Consensus 519 ----------~~~~~~~~-~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~ 587 (831)
.|..++.. ..+.+.+++..+.||||+.|.||..++..+++.|+.++|||||+||+.|||+||||||+-+
T Consensus 754 ~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~ 833 (1160)
T KOG0209|consen 754 LLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLN 833 (1160)
T ss_pred hhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhc
Confidence 01111111 1124556666778999999999999999999999999999999999999999999999843
Q ss_pred chHHHh-----------------------------------------------------------------------hhc
Q 003313 588 ATEAAR-----------------------------------------------------------------------GAA 596 (831)
Q Consensus 588 ~~~~a~-----------------------------------------------------------------------~aa 596 (831)
++..++ -||
T Consensus 834 ~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAA 913 (1160)
T KOG0209|consen 834 NPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAA 913 (1160)
T ss_pred CChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCcccccccccccc
Confidence 322000 024
Q ss_pred CEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHhhccchhccccCCC
Q 003313 597 DIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRV 675 (831)
Q Consensus 597 divl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~ 675 (831)
.+.-.-.+.++|-+.|+.||++.-+.-|.+.... -|..+.....-....-|.-|+..|...-.++.....+.++..++
T Consensus 914 PFTsK~asv~~v~~IIrQGRctLVtTlQMfKILA-LN~LisAYslSvlyldGVKfgD~QaTisGlLla~cFlfISrskP 991 (1160)
T KOG0209|consen 914 PFTSKLASVSSVTHIIRQGRCTLVTTLQMFKILA-LNCLISAYSLSVLYLDGVKFGDTQATISGLLLAACFLFISRSKP 991 (1160)
T ss_pred ccccccchHHHHHHHHHhcchhHHHHHHHHHHHH-HHHHHHHHHHHHhhhcCceecchhHhHHHHHHHHHHhheecCCc
Confidence 4444445678899999999999988888766543 24322222222223345667888887777776655455555444
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-70 Score=630.67 Aligned_cols=483 Identities=25% Similarity=0.370 Sum_probs=396.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEEC-CEEEEEeCCCcCCCcEEEEcCCCccccceEEEe
Q 003313 100 DWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRD-GQWKEQDAAVLVPGDIISIKFGDVIPADARLLE 178 (831)
Q Consensus 100 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rd-g~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~ 178 (831)
+|..+.+++++++++..++.+.++|+++.+++|.+..|++++++|+ |++++|++++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4555666777888888999999999999999999999999999985 667999999999999999999999999999999
Q ss_pred cCCeEEEcccccCCCccccccCCCeeeecceeee-----------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHHHH
Q 003313 179 GDPLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCIC 246 (831)
Q Consensus 179 g~~~~Vdes~LTGEs~pv~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~ 246 (831)
| ++.||||+|||||.|+.|.+||.||+||.+.+ .+|.+|++.++++++. .++++++.+++++++++.
T Consensus 133 g-~~~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 G-ESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred C-ceEEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 9 68999999999999999999999999999887 7899999999998774 789999999999988655
Q ss_pred HHHHHHHHHHHHHhhhchhhHhhHHH------------HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEecCCCc
Q 003313 247 FITVGMILEIIVMFPIQHRLYRDRIN------------MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAA 314 (831)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~l~------------~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGT 314 (831)
.+++..++.++++. ..+..++. .+++++..++.+++|+|+++|+++++|+|+++|++|||||||
T Consensus 212 ~v~~~a~~~~~~~~----~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGT 287 (562)
T TIGR01511 212 VVIAIALITFVIWL----FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGT 287 (562)
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCC
Confidence 44433332222211 11222221 456677889999999999999999999999999999999999
Q ss_pred cccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhccceeEEecCCCCCceEEEEEEc
Q 003313 315 LTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTD 394 (831)
Q Consensus 315 LT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sv~v~~ 394 (831)
||+|+|+|.++.. ..+.++++++.+++..+..++ ||+++|+++++.............+.+| .+.+...
T Consensus 288 LT~g~~~v~~i~~---~~~~~~~~~l~~aa~~e~~s~-HPia~Ai~~~~~~~~~~~~~~~~~~~~~----g~Gi~~~--- 356 (562)
T TIGR01511 288 LTQGKPTVTDVHV---FGDRDRTELLALAAALEAGSE-HPLAKAIVSYAKEKGITLVEVSDFKAIP----GIGVEGT--- 356 (562)
T ss_pred CcCCCEEEEEEec---CCCCCHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcCCCcCCCCCeEEEC----CceEEEE---
Confidence 9999999998763 234567788888877776665 9999999988743211111112222222 1222222
Q ss_pred CCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCCh
Q 003313 395 SEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDS 474 (831)
Q Consensus 395 ~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~ 474 (831)
.+| ..+..|+++.+.+... .. ..+.++|.+++.++.++ +++|.+.++|++||++
T Consensus 357 ~~g--~~~~iG~~~~~~~~~~---~~--------~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l~~~a 410 (562)
T TIGR01511 357 VEG--TKIQLGNEKLLGENAI---KI--------DGKAEQGSTSVLVAVNG-------------ELAGVFALEDQLRPEA 410 (562)
T ss_pred ECC--EEEEEECHHHHHhCCC---CC--------ChhhhCCCEEEEEEECC-------------EEEEEEEecccccHHH
Confidence 245 3467899998643211 11 12346899999988765 8999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHH
Q 003313 475 SDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVK 554 (831)
Q Consensus 475 ~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~ 554 (831)
+++|++|++.|++++|+|||+..++..+++++|++ +++++.|++|.++++
T Consensus 411 ~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------------------------~~~~~~p~~K~~~v~ 460 (562)
T TIGR01511 411 KEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------------------------VRAEVLPDDKAALIK 460 (562)
T ss_pred HHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc------------------------------EEccCChHHHHHHHH
Confidence 99999999999999999999999999999999983 478889999999999
Q ss_pred HHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 003313 555 ILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITI 634 (831)
Q Consensus 555 ~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni 634 (831)
.++++++.|+|+|||.||++|+++||+||+||+|++.++++||+++.++++..+.+++++||+++++|++|+.|++.+|+
T Consensus 461 ~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~ 540 (562)
T TIGR01511 461 ELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNV 540 (562)
T ss_pred HHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCChH
Q 003313 635 HIVLSFVLLALIWEYDFPPF 654 (831)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~ 654 (831)
..++..++.++.+++.++|+
T Consensus 541 ~~i~la~~~~~~~g~~~~p~ 560 (562)
T TIGR01511 541 IAIPIAAGVLYPIGILLSPA 560 (562)
T ss_pred HHHHHHHhhhhccccccCCC
Confidence 76665555555555556654
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-70 Score=632.59 Aligned_cols=448 Identities=35% Similarity=0.531 Sum_probs=378.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEEecCCeEEE
Q 003313 108 VCLLIINSSISFIEESNAENATAALMA--HLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKID 185 (831)
Q Consensus 108 ~~~~~~~~~i~~~~~~~~~~~~~~l~~--~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~~~~Vd 185 (831)
+++++++.+++.++++++++..+++.+ ..+++++|+|+| +++|++++|+|||+|.+++||+|||||+|++| .+.||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g-~~~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG-SCFVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc-cEEEE
Confidence 345677888899999999999999998 788999999999 99999999999999999999999999999999 79999
Q ss_pred cccccCCCccccccCCCeeeecceeee-----------ccchhhhHHHhhhccC-ccCcHHHHHHHHH-HHHHHHHHHHH
Q 003313 186 QSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTE-VVGHFQQVLTSIG-NFCICFITVGM 252 (831)
Q Consensus 186 es~LTGEs~pv~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~-~~~~~~~~~~~ 252 (831)
||+|||||.|+.|.+|+.+++||.+.+ .++..+++..++.+.. .++++++..+++. .+.+.++++..
T Consensus 81 es~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 81 ESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998876 5678889999887765 4788999999998 45443333322
Q ss_pred HHHHHHHhhhc-h-----hhHhhHHH------------HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEecCCCc
Q 003313 253 ILEIIVMFPIQ-H-----RLYRDRIN------------MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAA 314 (831)
Q Consensus 253 ~~~~~~~~~~~-~-----~~~~~~l~------------~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGT 314 (831)
++.++.++... . ..+..++. .+++++..+..+|+++|+++|+++++|+||+++++|||||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGT 240 (499)
T TIGR01494 161 LAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGT 240 (499)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCc
Confidence 22222221111 1 11122211 445667778899999999999999999999999999999999
Q ss_pred cccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhccceeEEecCCCCCceEEEEEEc
Q 003313 315 LTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTD 394 (831)
Q Consensus 315 LT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sv~v~~ 394 (831)
||+|+|+|.++... . . + ...+||++.|+++++.. +.++..||++.+++|+++++.
T Consensus 241 LT~~~~~v~~~~~~--~-~-------------~-~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~ 295 (499)
T TIGR01494 241 LTKNEMSFKKVSVL--G-G-------------E-YLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRG 295 (499)
T ss_pred cccCceEEEEEEec--C-C-------------C-cCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEec
Confidence 99999999997641 1 0 1 23459999999988752 123568999999999988875
Q ss_pred CCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCCh
Q 003313 395 SEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDS 474 (831)
Q Consensus 395 ~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~ 474 (831)
.++ .++||+++.+.+.|.. +.+..++++++|+|++++|+++ +++|++.++|++|+++
T Consensus 296 ~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~ 352 (499)
T TIGR01494 296 PDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDA 352 (499)
T ss_pred CCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhH
Confidence 333 4789999999988752 2334456788999999999886 8999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHH
Q 003313 475 SDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVK 554 (831)
Q Consensus 475 ~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~ 554 (831)
+++|+.|+++|++++|+|||+..+|..+|+++|+ +++++|++|.++|+
T Consensus 353 ~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi--------------------------------~~~~~p~~K~~~v~ 400 (499)
T TIGR01494 353 KETISELREAGIRVIMLTGDNVLTAKAIAKELGI--------------------------------FARVTPEEKAALVE 400 (499)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc--------------------------------eeccCHHHHHHHHH
Confidence 9999999999999999999999999999999996 68899999999999
Q ss_pred HHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 003313 555 ILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITI 634 (831)
Q Consensus 555 ~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni 634 (831)
.+|+.|+.|+|+|||.||+||+++|||||+|+ ++++||++++++++..++.++++||++++++++++.|.+.+|+
T Consensus 401 ~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~ 475 (499)
T TIGR01494 401 ALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNL 475 (499)
T ss_pred HHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999997 6899999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 003313 635 HIVLSFVL 642 (831)
Q Consensus 635 ~~~~~~~~ 642 (831)
..++..++
T Consensus 476 ~~~~~a~~ 483 (499)
T TIGR01494 476 ILIPLAAL 483 (499)
T ss_pred HHHHHHHH
Confidence 75554443
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-69 Score=631.82 Aligned_cols=494 Identities=27% Similarity=0.373 Sum_probs=402.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECC-EEEEEeCCCcCC
Q 003313 80 VMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDG-QWKEQDAAVLVP 158 (831)
Q Consensus 80 ~l~i~ail~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg-~~~~i~~~~lv~ 158 (831)
++.++++++++.+ .|.++.+++++++++..++.++++|+++.+++|.+..|++++|+||| ++++|++++|+|
T Consensus 4 l~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~ 76 (556)
T TIGR01525 4 LMALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQV 76 (556)
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCC
Confidence 3455566666665 78899999999999999999999999999999999999999999996 999999999999
Q ss_pred CcEEEEcCCCccccceEEEecCCeEEEcccccCCCccccccCCCeeeecceeee-----------ccchhhhHHHhhhcc
Q 003313 159 GDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDST 227 (831)
Q Consensus 159 GDiI~l~~G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~ 227 (831)
||+|.+++||+|||||+|++| ++.||||+|||||.|+.|.+|+.||+||.+.+ .+|+.|++.+++.++
T Consensus 77 GDiv~v~~G~~iP~Dg~vi~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~ 155 (556)
T TIGR01525 77 GDIVIVRPGERIPVDGVVISG-ESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEA 155 (556)
T ss_pred CCEEEECCCCEeccceEEEec-ceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHH
Confidence 999999999999999999999 58999999999999999999999999999877 689999999988776
Q ss_pred C-ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhch-hhHhhHHH------------HHHHHHHHHHHhhhcCceEEc
Q 003313 228 E-VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQH-RLYRDRIN------------MLSVTLAIASYRLSQRGAITK 293 (831)
Q Consensus 228 ~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~------------~l~~~l~~~~~~l~~~~ilvk 293 (831)
. .++++++.++++++++..+++++.++.+++++.... ..+..++. .++++++.++.+++|+|+++|
T Consensus 156 ~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk 235 (556)
T TIGR01525 156 QSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGALGALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIK 235 (556)
T ss_pred hhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCceec
Confidence 4 789999999999987655443333333333221111 11222221 456778889999999999999
Q ss_pred cchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCC--hHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhh
Q 003313 294 RMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMD--KDILVLLAARASRLENQDAIDAAIINMLADPKEARA 371 (831)
Q Consensus 294 ~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~--~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~ 371 (831)
+++++|++|++|++|||||||||+|+|+|.++.. . .+.+ +++++.+++..+..+. ||++.|+++++........
T Consensus 236 ~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~--~-~~~~~~~~~~l~~a~~~e~~~~-hp~~~Ai~~~~~~~~~~~~ 311 (556)
T TIGR01525 236 GGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEP--L-DDASISEEELLALAAALEQSSS-HPLARAIVRYAKKRGLELP 311 (556)
T ss_pred CchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEe--c-CCCCccHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcCCCcc
Confidence 9999999999999999999999999999998763 1 2223 6677777776665544 9999999998753211000
Q ss_pred ccc-eeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCC
Q 003313 372 NIN-EVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMT 450 (831)
Q Consensus 372 ~~~-~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~ 450 (831)
. + ..+.+| .+.....+ +|. ..+..|+++.+. ... .+ ..+.++.++.+.++|+|+++++.++
T Consensus 312 ~-~~~~~~~~----~~gi~~~~---~g~-~~~~lg~~~~~~--~~~-~~-~~~~~~~~~~~~~~g~~~~~v~~~~----- 373 (556)
T TIGR01525 312 K-QEDVEEVP----GKGVEATV---DGQ-EEVRIGNPRLLE--LAA-EP-ISASPDLLNEGESQGKTVVFVAVDG----- 373 (556)
T ss_pred c-ccCeeEec----CCeEEEEE---CCe-eEEEEecHHHHh--hcC-CC-chhhHHHHHHHhhCCcEEEEEEECC-----
Confidence 0 1 112221 11222221 341 345678888761 111 11 1223455667888999999999865
Q ss_pred CCCCCCCceeeeeccccCCCCCChHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcc
Q 003313 451 EDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLG-VCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEAL 529 (831)
Q Consensus 451 ~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~G-i~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~ 529 (831)
+++|.+.++|++||+++++|++|+++| +++.|+|||+..++.++++++|+..
T Consensus 374 --------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~------------------- 426 (556)
T TIGR01525 374 --------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE------------------- 426 (556)
T ss_pred --------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe-------------------
Confidence 899999999999999999999999999 9999999999999999999999952
Q ss_pred cHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHH
Q 003313 530 PVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVIC 609 (831)
Q Consensus 530 ~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~ 609 (831)
+|+++.|++|.++++.+++.++.|+|+|||.||++|+++||+|+++|++++.+++.||+++.+++++.+.
T Consensus 427 ----------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~~l~ 496 (556)
T TIGR01525 427 ----------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSLP 496 (556)
T ss_pred ----------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHH
Confidence 5889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 610 SAVLTSRTVFQIMKNCMIHAVSITIHIVLSF 640 (831)
Q Consensus 610 ~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~ 640 (831)
+++++||++++|+++++.|++.+|+..++..
T Consensus 497 ~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a 527 (556)
T TIGR01525 497 TAIDLSRKTRRIIKQNLAWALGYNLVAIPLA 527 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999665443
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-69 Score=626.87 Aligned_cols=474 Identities=28% Similarity=0.393 Sum_probs=395.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCC
Q 003313 80 VMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPG 159 (831)
Q Consensus 80 ~l~i~ail~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~G 159 (831)
++.++++++++.+ +|+++.+++++++++..++.++++|+++.+++|.+..+++++|+|||+++++++++|+||
T Consensus 4 l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~G 76 (536)
T TIGR01512 4 LMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVG 76 (536)
T ss_pred HHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCC
Confidence 4566777777765 799999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCccccceEEEecCCeEEEcccccCCCccccccCCCeeeecceeee-----------ccchhhhHHHhhhccC
Q 003313 160 DIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTE 228 (831)
Q Consensus 160 DiI~l~~G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~ 228 (831)
|+|.+++||+|||||++++| ++.||||+|||||.|+.|++||.+|+||.+.+ .+|.+|++.++++++.
T Consensus 77 Div~v~~G~~iP~Dg~ii~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~ 155 (536)
T TIGR01512 77 DVVVVKPGERVPVDGVVLSG-TSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQ 155 (536)
T ss_pred CEEEEcCCCEeecceEEEeC-cEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHh
Confidence 99999999999999999999 68999999999999999999999999998876 7899999999888764
Q ss_pred -ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhh--HhhHHH------------HHHHHHHHHHHhhhcCceEEc
Q 003313 229 -VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRL--YRDRIN------------MLSVTLAIASYRLSQRGAITK 293 (831)
Q Consensus 229 -~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~------------~l~~~l~~~~~~l~~~~ilvk 293 (831)
.++++++.++++++++..+++++.++.+++++...... +..++. .+++++..++.+++|+|+++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik 235 (536)
T TIGR01512 156 SRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKRWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIK 235 (536)
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEc
Confidence 78899999999998766555443443333333221111 111211 356778889999999999999
Q ss_pred cchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhcc
Q 003313 294 RMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANI 373 (831)
Q Consensus 294 ~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~ 373 (831)
+++++|++|+++++|||||||||+|+|+|.++.. .+++.+++..+..+ .||++.|+++++.+.. .+
T Consensus 236 ~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e~~~-~hp~~~Ai~~~~~~~~----~~ 301 (536)
T TIGR01512 236 GGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAEQAS-SHPLARAIVDYARKRE----NV 301 (536)
T ss_pred CcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHhccC-CCcHHHHHHHHHHhcC----CC
Confidence 9999999999999999999999999999988652 26677776655544 4999999998875321 22
Q ss_pred ceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCC
Q 003313 374 NEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDS 453 (831)
Q Consensus 374 ~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~ 453 (831)
...+.+|. +..... .+|+ .+..|+++.+.+.. ...+.++|.+++.++.+.
T Consensus 302 ~~~~~~~g----~gi~~~---~~g~--~~~ig~~~~~~~~~-------------~~~~~~~~~~~~~v~~~~-------- 351 (536)
T TIGR01512 302 ESVEEVPG----EGVRAV---VDGG--EVRIGNPRSLEAAV-------------GARPESAGKTIVHVARDG-------- 351 (536)
T ss_pred cceEEecC----CeEEEE---ECCe--EEEEcCHHHHhhcC-------------CcchhhCCCeEEEEEECC--------
Confidence 22232221 112211 2454 34568887653311 014566788888887654
Q ss_pred CCCCceeeeeccccCCCCCChHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHH
Q 003313 454 PGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGV-CVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVD 532 (831)
Q Consensus 454 ~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi-~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 532 (831)
.++|.+.++|++||+++++|++|+++|+ ++.|+|||+..++..+++++|+..
T Consensus 352 -----~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~---------------------- 404 (536)
T TIGR01512 352 -----TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE---------------------- 404 (536)
T ss_pred -----EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh----------------------
Confidence 8999999999999999999999999999 999999999999999999999952
Q ss_pred HHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEec-CchHHHhhhcCEEEeCCChhHHHHH
Q 003313 533 ELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-GATEAARGAADIVLTEPGLSVICSA 611 (831)
Q Consensus 533 ~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~-~~~~~a~~aadivl~~~~~~~i~~~ 611 (831)
+|+++.|++|.++++.++++++.|+|+|||.||++|+++||+||++| ++++.++++||+++.++++..+.++
T Consensus 405 -------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~ 477 (536)
T TIGR01512 405 -------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQA 477 (536)
T ss_pred -------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHH
Confidence 58899999999999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 612 VLTSRTVFQIMKNCMIHAVSITIHIVLS 639 (831)
Q Consensus 612 i~~gR~~~~~i~~~i~~~l~~ni~~~~~ 639 (831)
+++||++++++++|+.|++.+|+..++.
T Consensus 478 i~~~r~~~~~i~~nl~~a~~~n~~~i~~ 505 (536)
T TIGR01512 478 IRLARRTRRIVKQNVVIALGIILLLILL 505 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999865443
|
. |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-72 Score=664.32 Aligned_cols=763 Identities=16% Similarity=0.188 Sum_probs=526.6
Q ss_pred HHHhcCCCccCCCCCcHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 003313 49 RLKFFGSNKLEKKPENKF----LKFLSFMWNPLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESN 124 (831)
Q Consensus 49 r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~i~ail~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~ 124 (831)
+...|-.|.+...|++.+ +.+++||.++.+++|++.++++++... +.+.|...+.+++++.++.+.+.++++|
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~---~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLS---PFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCccc---ccCccceeeceeeeehHHHHHHHHhhhh
Confidence 555899999999998765 788999999999999999999998632 3456667777778888888889999999
Q ss_pred HHHHHHHHhccCCCeEEEEECCE-EEEEeCCCcCCCcEEEEcCCCccccceEEEecC----CeEEEcccccCCCcccccc
Q 003313 125 AENATAALMAHLTPKTKVLRDGQ-WKEQDAAVLVPGDIISIKFGDVIPADARLLEGD----PLKIDQSELTGESLTVTKE 199 (831)
Q Consensus 125 ~~~~~~~l~~~~~~~~~V~rdg~-~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~----~~~Vdes~LTGEs~pv~K~ 199 (831)
+++...+. +..++.|.|++. +++..|+++++||+|++..++.+|||.++++++ -|+|+++.|+||+....|+
T Consensus 105 R~~~D~~i---N~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKEV---NNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHHh---hcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 88776544 567899998644 899999999999999999999999999999875 3999999999999988775
Q ss_pred C-----------------------------------------------CCeeeecceeee------ccchhhhHHHhhhc
Q 003313 200 T-----------------------------------------------GDEVFSGLTCKH------VHSFFGKAADLVDS 226 (831)
Q Consensus 200 ~-----------------------------------------------g~~v~aGt~v~~------~~t~~g~~~~~~~~ 226 (831)
. .+.++.|+.+++ ...+.|..++.+++
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 3 023556666655 56677888888877
Q ss_pred cC----ccCcHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhhhc----h-h-h-Hh-------hHHH-----------HHHH
Q 003313 227 TE----VVGHFQQVLTSIGNFCICFITVGMILEIIV-MFPIQ----H-R-L-YR-------DRIN-----------MLSV 276 (831)
Q Consensus 227 ~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~-~-~-~~-------~~l~-----------~l~~ 276 (831)
+. +++++++.++.....+++.+...+++..+. ..... . . . +. .+.. ++++
T Consensus 262 ~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~liPI 341 (1151)
T KOG0206|consen 262 SGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLIPI 341 (1151)
T ss_pred cCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceEEE
Confidence 63 667788888877655433332222221111 11100 0 0 0 00 0010 0111
Q ss_pred HH-----------HH---HHHhh----hcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCCh--
Q 003313 277 TL-----------AI---ASYRL----SQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDK-- 336 (831)
Q Consensus 277 ~l-----------~~---~~~~l----~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~-- 336 (831)
++ ++ .-..| ......+|+.+..|+||++++|++|||||||+|.|++.+|.+++..++...
T Consensus 342 SLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~ 421 (1151)
T KOG0206|consen 342 SLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTE 421 (1151)
T ss_pred EEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCCh
Confidence 10 00 01122 245788999999999999999999999999999999999987543222110
Q ss_pred ------------------------------------------HHH-HHHHHHhccc------------cCCChHHHHHHH
Q 003313 337 ------------------------------------------DIL-VLLAARASRL------------ENQDAIDAAIIN 361 (831)
Q Consensus 337 ------------------------------------------~~~-l~~a~~~~~~------------~~~~~~~~ai~~ 361 (831)
.+. ..+|.|++.. ....|.|.|++.
T Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~ 501 (1151)
T KOG0206|consen 422 VEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVE 501 (1151)
T ss_pred hhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHH
Confidence 112 2233333211 113688999988
Q ss_pred HhCChHH----------------HhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhcc-CchhhHHHH
Q 003313 362 MLADPKE----------------ARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQ-EKEEIGGKV 424 (831)
Q Consensus 362 ~~~~~~~----------------~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~-~~~~~~~~~ 424 (831)
.+.+.+- ....|+.++.++|+|.||||||+|++++|+..++||||+..|++++. +.....++.
T Consensus 502 aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T 581 (1151)
T KOG0206|consen 502 AARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKT 581 (1151)
T ss_pred HHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHH
Confidence 7643110 24689999999999999999999999999999999999999999998 445667788
Q ss_pred HHHHHHHHhccCeeeeeeeecCCCCC-------------------------CCCCCCCceeeeeccccCCCCCChHHHHH
Q 003313 425 HEIINKLAEKGLRSLAVAVQEVPEMT-------------------------EDSPGGPRSFCGLLPLFDPPRHDSSDTIH 479 (831)
Q Consensus 425 ~~~~~~~~~~G~r~l~~a~~~~~~~~-------------------------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~ 479 (831)
.+++++++.+|+|++++|||.+++++ .+.+|+||+++|..++||+++++++++|+
T Consensus 582 ~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~ 661 (1151)
T KOG0206|consen 582 QEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIA 661 (1151)
T ss_pred HHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHH
Confidence 88999999999999999999998653 24589999999999999999999999999
Q ss_pred HHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccC---------------------------------------
Q 003313 480 RALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLG--------------------------------------- 520 (831)
Q Consensus 480 ~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~--------------------------------------- 520 (831)
.|++||||+||+|||..+||.+||..|++..+....-.+..
T Consensus 662 ~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 741 (1151)
T KOG0206|consen 662 KLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPF 741 (1151)
T ss_pred HHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCc
Confidence 99999999999999999999999999999765332111111
Q ss_pred ------CcCCCCCcc----cHHHHHHh--cCcEEEeChHHHHHHHHHHhh-cCCEEEEEcCCccChhhhccCCeeEEec-
Q 003313 521 ------RDKDENEAL----PVDELIEK--ADGFTDVFAEHKYEIVKILQE-KKHVVGMTGDGVNDAPALKKADIGIAVA- 586 (831)
Q Consensus 521 ------~~~~~~~~~----~~~~~~~~--~~v~~~~~P~~K~~iv~~l~~-~g~~v~~iGDG~ND~~al~~AdvgIa~~- 586 (831)
+.+...... .+.++... ..++||++|.||+.+|+..++ .+.++++||||+||++|+++|||||+++
T Consensus 742 aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG 821 (1151)
T KOG0206|consen 742 ALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISG 821 (1151)
T ss_pred eEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeecc
Confidence 100000000 11222222 247999999999999999975 5889999999999999999999999995
Q ss_pred CchHHHhhhcCEEEeCCChhHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC----ChHHHHHHHH
Q 003313 587 GATEAARGAADIVLTEPGLSVICSAV-LTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWEYDF----PPFMVLIIAV 661 (831)
Q Consensus 587 ~~~~~a~~aadivl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~----~~~~~l~~~~ 661 (831)
.....|..+||+.+.+ |+-+.+++ .|||+.|.|+.+++.|.+++|+...+..+++.++.++.. .++++.++|+
T Consensus 822 ~EGmQAvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv 899 (1151)
T KOG0206|consen 822 QEGMQAVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNV 899 (1151)
T ss_pred chhhhhhhcccchHHH--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeE
Confidence 4444556799999966 77777765 789999999999999999999999899999888877644 4444444444
Q ss_pred -hhccchhccccCCCCCC-----CCC--------CccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccCC
Q 003313 662 -LNDGTIITISKGRVKSS-----LRP--------DGWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLS 727 (831)
Q Consensus 662 -~~~~~~~~l~~~~~~~~-----~~~--------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 727 (831)
|+.+|++.++.-..+.+ .-| +.....+.++.+++.|+++++++|++.+..+... .....|. .
T Consensus 900 ~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~-~~~~~G~---~ 975 (1151)
T KOG0206|consen 900 LFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQ-AVTSNGL---T 975 (1151)
T ss_pred EeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhheee-eeccCCC---c
Confidence 55666777765433322 111 1122345666677779999999986665554322 1111121 1
Q ss_pred CcHHHHHHHHHHHHHHHHHHH-hhhhccCCCCCCcCchHHHHHHHHHHHHHHHHHHHhhh--------cccccccchhHH
Q 003313 728 SNTEEISSAVHLQVSIISQAL-IFVTRSQSWSFLERPGALLMCAFVLAQLVATLIAVYAH--------ISFAYISGIGWG 798 (831)
Q Consensus 728 ~~~~~~~t~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ 798 (831)
.+.....+..|+.+++...+. .+.+. .|.|++... ++.++++..++..++...++ .+........+.
T Consensus 976 ~d~~~~G~~~~T~~Vivv~~~iaL~~~--ywT~i~~i~--i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~ 1051 (1151)
T KOG0206|consen 976 ADYWTLGTTVFTIIVIVVNLKIALETS--YWTWINHIV--IWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPS 1051 (1151)
T ss_pred CChhhccceEEEEEEEEEEeeeeeeeh--heeHHHHHH--HHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcCch
Confidence 112222233333333222222 12222 233332221 12222222222222211000 111112223445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 003313 799 WAGVIWLYSLVFYILLDIIKFTVRTLSRE 827 (831)
Q Consensus 799 ~~~~~~~~~~~~~~~~e~~k~~~r~~~~~ 827 (831)
+|+.+++.+++.++++-++|.+.+.+.|.
T Consensus 1052 fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt 1080 (1151)
T KOG0206|consen 1052 FWLTLLLTVVAALLPDFVYKSLQRTFFPT 1080 (1151)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhhCCc
Confidence 77777889999999999999999865554
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-69 Score=652.33 Aligned_cols=503 Identities=22% Similarity=0.283 Sum_probs=408.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEEec
Q 003313 100 DWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEG 179 (831)
Q Consensus 100 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g 179 (831)
+|.++..+++++.++.+++...+.|+++.+++|.++.|++++++|||++++|+.++|+|||+|.|++||+|||||+|++|
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g 364 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG 364 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc
Confidence 34446778888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEcccccCCCccccccCCCeeeecceeee-----------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHHHHH
Q 003313 180 DPLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCICF 247 (831)
Q Consensus 180 ~~~~Vdes~LTGEs~pv~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~ 247 (831)
++.||||+|||||.|+.|.+||.||+||.+.+ .+|.+|++.++++++. .++++|+.+++++++++.+
T Consensus 365 -~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~ 443 (834)
T PRK10671 365 -EAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPV 443 (834)
T ss_pred -eEEEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999887 7899999999998774 7889999999999876555
Q ss_pred HHHHHHHHHHHHhhhchh-----hHhhHHH------------HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEec
Q 003313 248 ITVGMILEIIVMFPIQHR-----LYRDRIN------------MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSV 310 (831)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~-----~~~~~l~------------~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~D 310 (831)
+++..++.+++++..... .+..++. .+++++..++.+++|+|+++|+++++|++++++++|||
T Consensus 444 v~~~a~~~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fD 523 (834)
T PRK10671 444 VVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFD 523 (834)
T ss_pred HHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEc
Confidence 444333322222221111 1111221 34566777899999999999999999999999999999
Q ss_pred CCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhccceeEEecCCCCCc-eEE
Q 003313 311 KTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDK-RTA 389 (831)
Q Consensus 311 KTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~f~s~~k-~~s 389 (831)
||||||+|+|+|.++.. ..+.++++++.+++..+..++ ||+++|+++++.+.. .... .+|..... .+.
T Consensus 524 KTGTLT~g~~~v~~~~~---~~~~~~~~~l~~a~~~e~~s~-hp~a~Ai~~~~~~~~--~~~~-----~~~~~~~g~Gv~ 592 (834)
T PRK10671 524 KTGTLTEGKPQVVAVKT---FNGVDEAQALRLAAALEQGSS-HPLARAILDKAGDMT--LPQV-----NGFRTLRGLGVS 592 (834)
T ss_pred CCCccccCceEEEEEEc---cCCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHhhCC--CCCc-----ccceEecceEEE
Confidence 99999999999988652 234567778888777766555 999999998764210 0111 12222221 111
Q ss_pred EEEEcCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCC
Q 003313 390 ITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDP 469 (831)
Q Consensus 390 v~v~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~ 469 (831)
.. .+|+ .+.+|+++.+.+.... .+.+.+.++.+.++|.+++++++++ +++|++.++|+
T Consensus 593 ~~---~~g~--~~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~ 650 (834)
T PRK10671 593 GE---AEGH--ALLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDP 650 (834)
T ss_pred EE---ECCE--EEEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCc
Confidence 11 2453 4567999987542211 2345566677889999999999876 79999999999
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHH
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHK 549 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K 549 (831)
+||+++++|++|++.|++++|+|||+..++..+++++||.. +++++.|++|
T Consensus 651 ~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~-----------------------------~~~~~~p~~K 701 (834)
T PRK10671 651 LRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE-----------------------------VIAGVLPDGK 701 (834)
T ss_pred chhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE-----------------------------EEeCCCHHHH
Confidence 99999999999999999999999999999999999999952 6899999999
Q ss_pred HHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHH
Q 003313 550 YEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHA 629 (831)
Q Consensus 550 ~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 629 (831)
.+.++.++.+++.|+|+|||.||++|+++||+||+||+|++.++++||++++++++..|..++++||+++++|++|+.|+
T Consensus 702 ~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a 781 (834)
T PRK10671 702 AEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGA 781 (834)
T ss_pred HHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh-ccCCCChHHHHHHHHhhcc
Q 003313 630 VSITIHIVLSFVLLALI-WEYDFPPFMVLIIAVLNDG 665 (831)
Q Consensus 630 l~~ni~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~ 665 (831)
+.||+..++..++.+.. +++.++|+.-.....+.++
T Consensus 782 ~~yn~~~i~~a~g~~~p~~g~~l~p~~a~~~m~~ss~ 818 (834)
T PRK10671 782 FIYNSLGIPIAAGILWPFTGTLLNPVVAGAAMALSSI 818 (834)
T ss_pred HHHHHHHHHHHHhchhhhhhcccCHHHHHHHhcccce
Confidence 99999766655433322 2335777654444444433
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-70 Score=593.68 Aligned_cols=744 Identities=20% Similarity=0.237 Sum_probs=498.1
Q ss_pred HHHHhcCCCccCCCCCcHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCC-CCchhhHHHHHHHHHHHHHHHHHHH
Q 003313 48 VRLKFFGSNKLEKKPENKF----LKFLSFMWNPLSWVMETAALMAIALANGGGQ-GPDWQDSVGIVCLLIINSSISFIEE 122 (831)
Q Consensus 48 ~r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~l~i~ail~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~i~~~~~ 122 (831)
.++++|.+|.+...+++.+ ..+++||+.++++++++.++.+++.....+. ..+|...++++.+.++...++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788999988777643 5567889989999999888888875543333 2355555666666666777777777
Q ss_pred HHHHHHHHHHhccCCCeE-EEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEEecC----CeEEEcccccCCCcccc
Q 003313 123 SNAENATAALMAHLTPKT-KVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGD----PLKIDQSELTGESLTVT 197 (831)
Q Consensus 123 ~~~~~~~~~l~~~~~~~~-~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~----~~~Vdes~LTGEs~pv~ 197 (831)
+++++..+ +... +.-|||...+ +++++++||+|.++.+++||||.++++.+ ++.+-+-.|+||+.-..
T Consensus 154 ~~rd~~~N------se~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 154 RRRDRELN------SEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHhhhhhh------hhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 77665432 3333 3447775544 99999999999999999999999999643 58999999999996554
Q ss_pred ccC-----------------------------------------------CCeeeecceeee-----ccchhhhHHHhhh
Q 003313 198 KET-----------------------------------------------GDEVFSGLTCKH-----VHSFFGKAADLVD 225 (831)
Q Consensus 198 K~~-----------------------------------------------g~~v~aGt~v~~-----~~t~~g~~~~~~~ 225 (831)
|-| .|+++++|.+.+ ...+.|+.++.+.
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRsvM 306 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRSVM 306 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHHHh
Confidence 432 245677766655 6778899888776
Q ss_pred ccC----ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHhhHHH--------HHHHHHHH--HH------Hhh
Q 003313 226 STE----VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRIN--------MLSVTLAI--AS------YRL 285 (831)
Q Consensus 226 ~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--------~l~~~l~~--~~------~~l 285 (831)
++. +.+.++..+|.+.+++.+++++..++. ......+..|...+. ++|++|-. -+ ...
T Consensus 307 Nts~pr~KvGllelEiN~ltKiL~~~vlvLs~vm--v~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i 384 (1051)
T KOG0210|consen 307 NTSRPRSKVGLLELEINGLTKILFCFVLVLSIVM--VAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQI 384 (1051)
T ss_pred ccCCcccccceeeeecccHHHHHHHHHHHHHHHH--HHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhhc
Confidence 653 445677778888887665554433321 111111222322211 33333211 11 111
Q ss_pred hc----CceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCCh-------------------------
Q 003313 286 SQ----RGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDK------------------------- 336 (831)
Q Consensus 286 ~~----~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~------------------------- 336 (831)
.+ .|.++|+.+.-|+||+++++.+|||||||+|+|++++++.+....+.+.
T Consensus 385 ~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~ 464 (1051)
T KOG0210|consen 385 EHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSR 464 (1051)
T ss_pred ccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchh
Confidence 11 4789999999999999999999999999999999999887533211110
Q ss_pred ----------HHHHHHHHHhcccc-----------CCChHHHHHHHHhCC-----------------hHHHhhccceeEE
Q 003313 337 ----------DILVLLAARASRLE-----------NQDAIDAAIINMLAD-----------------PKEARANINEVHF 378 (831)
Q Consensus 337 ----------~~~l~~a~~~~~~~-----------~~~~~~~ai~~~~~~-----------------~~~~~~~~~~l~~ 378 (831)
+.+..+|.|++... ..+|.|.|+++.... +.....+|++++.
T Consensus 465 ~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~v 544 (1051)
T KOG0210|consen 465 VKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQV 544 (1051)
T ss_pred hcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEE
Confidence 12233344433211 114556665543211 1112347999999
Q ss_pred ecCCCCCceEEEEEEcC-CCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCC-------
Q 003313 379 LPFNPVDKRTAITYTDS-EGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMT------- 450 (831)
Q Consensus 379 ~~f~s~~k~~sv~v~~~-~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~------- 450 (831)
+||+|+.|||.++|+++ .|+...+.|||+-.+-.+.+. .+.+++...+|+++|+|++.+|.|.+++++
T Consensus 545 FPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~----NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~ 620 (1051)
T KOG0210|consen 545 FPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY----NDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEA 620 (1051)
T ss_pred eccccccceeeEEEecCCCceEEEEEecchHHHhccccc----chhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHH
Confidence 99999999999999976 688899999999988777654 456778889999999999999999997653
Q ss_pred -------------------CCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC
Q 003313 451 -------------------EDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTN 511 (831)
Q Consensus 451 -------------------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~ 511 (831)
+..+|.||.++|+.+.||+++++++.+++.||+|||++||+|||+.+||..+|+..++...
T Consensus 621 y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR 700 (1051)
T KOG0210|consen 621 YNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSR 700 (1051)
T ss_pred HHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceec
Confidence 1247899999999999999999999999999999999999999999999999999998653
Q ss_pred CCCCccc--------------------------cCCcCCCC---CcccHHHHHHhc--CcEEEeChHHHHHHHHHHhhc-
Q 003313 512 MYPSSLL--------------------------LGRDKDEN---EALPVDELIEKA--DGFTDVFAEHKYEIVKILQEK- 559 (831)
Q Consensus 512 ~~~~~~~--------------------------~~~~~~~~---~~~~~~~~~~~~--~v~~~~~P~~K~~iv~~l~~~- 559 (831)
...-+++ .|+.++-- .+.++.++..++ .++|||+|+||+++++.+|++
T Consensus 701 ~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t 780 (1051)
T KOG0210|consen 701 GQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKT 780 (1051)
T ss_pred CceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhh
Confidence 2211111 11111000 112334443333 479999999999999999984
Q ss_pred CCEEEEEcCCccChhhhccCCeeEEe-cCchHHHhhhcCEEEeCCChhHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHH
Q 003313 560 KHVVGMTGDGVNDAPALKKADIGIAV-AGATEAARGAADIVLTEPGLSVICSAV-LTSRTVFQIMKNCMIHAVSITIHIV 637 (831)
Q Consensus 560 g~~v~~iGDG~ND~~al~~AdvgIa~-~~~~~~a~~aadivl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~ni~~~ 637 (831)
|..|+++|||.||++|+++||+||++ |+....|.-|||+.+.+ |+.+-+++ -+||..|+|-.+.-+|.+=....+.
T Consensus 781 ~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is 858 (1051)
T KOG0210|consen 781 GKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIIS 858 (1051)
T ss_pred CceEEEEcCCCccchheeecccceeeecccccccchhccccHHH--HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHH
Confidence 89999999999999999999999999 54445566799999965 99999987 6799999999998888655444333
Q ss_pred HHHHHHHHhccCCCChH-------HHHHHHHhhccchhccccCCCCCC------------C-CCCccchHHHHHHHHHHH
Q 003313 638 LSFVLLALIWEYDFPPF-------MVLIIAVLNDGTIITISKGRVKSS------------L-RPDGWKLNEIFAAGIVIG 697 (831)
Q Consensus 638 ~~~~~~~~~~~~~~~~~-------~~l~~~~~~~~~~~~l~~~~~~~~------------~-~~~~~~~~~~~~~~~~~g 697 (831)
.+..++... +.|.|+ .+.+..+-+-+|.+++..|+.-.+ . ..+.+..+.+ ..+++.+
T Consensus 859 ~~Qavfs~v--~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF-~iwvLIS 935 (1051)
T KOG0210|consen 859 TMQAVFSSV--FYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTF-FIWVLIS 935 (1051)
T ss_pred HHHHHHHHH--hhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhh-hhhhhHH
Confidence 222222111 122222 233444444445567766654322 1 1122233444 4445558
Q ss_pred HHHHHHHHHHHHHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHHHHH-hhhhccCCCCCCcCchHHHHHHHHHHHH
Q 003313 698 NYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQAL-IFVTRSQSWSFLERPGALLMCAFVLAQL 776 (831)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~l~~~~~~~~~ 776 (831)
++++.+....+++.+.+.+ -...++.|.++++....+ ++.+++|.| .++++-++++.
T Consensus 936 iYQG~vim~g~~~l~~~ef--------------~~ivaisFtaLi~tELiMVaLtv~tw~~--------~m~vae~lsL~ 993 (1051)
T KOG0210|consen 936 IYQGSVIMYGALLLFDTEF--------------IHIVAISFTALILTELIMVALTVRTWHW--------LMVVAELLSLA 993 (1051)
T ss_pred HHcccHHHHHHHHHhhhhh--------------eEeeeeeeHHHHHHHHHHHhhhhhhhhH--------HHHHHHHHHHH
Confidence 8888877765444443222 123467788888888876 455566433 34445444443
Q ss_pred HHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCC
Q 003313 777 VATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVRTLSREAWNQ 831 (831)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~k~~~r~~~~~~w~~ 831 (831)
+-.+...+....+-.-.-.+|.+.+-+.++.++.+++..+.|.+.|.++||+|.|
T Consensus 994 ~Yivsl~~l~~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYaK 1048 (1051)
T KOG0210|consen 994 LYIVSLAFLHEYFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSYAK 1048 (1051)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhh
Confidence 3222211111001111112444444445566667777788999999999999876
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-61 Score=508.00 Aligned_cols=497 Identities=23% Similarity=0.331 Sum_probs=375.7
Q ss_pred HHHhHHHHHHHHHHHHHHHHh----cCCCCCCchhhHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhccC-CCeEEE
Q 003313 72 FMWNPLSWVMETAALMAIALA----NGGGQGPDWQDSVGIVCL----LIINSSISFIEESNAENATAALMAHL-TPKTKV 142 (831)
Q Consensus 72 ~~~~~~~~~l~i~ail~~~~~----~~~~~~~~~~~~~~i~~~----~~~~~~i~~~~~~~~~~~~~~l~~~~-~~~~~V 142 (831)
+.+||..++.++.++++.++. ..++...+......+.++ +++...-+.+.|-|.+.+.++|++.. ...+++
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 467888777777776666332 122211222222222222 33344445566666655556665533 235666
Q ss_pred EEC-CEEEEEeCCCcCCCcEEEEcCCCccccceEEEecCCeEEEcccccCCCccccccCC---Ceeeecceeee------
Q 003313 143 LRD-GQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETG---DEVFSGLTCKH------ 212 (831)
Q Consensus 143 ~rd-g~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g---~~v~aGt~v~~------ 212 (831)
+++ |.++.+++.+|+.||+|.|++||.||+||.+++| ...||||++||||.||-|.+| +.|-.||.+.+
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG-~asVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~ir 187 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIR 187 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEee-eeecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEE
Confidence 665 8999999999999999999999999999999999 689999999999999999998 67999999887
Q ss_pred -----ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhchhhHh----hHHH--HHHHH--
Q 003313 213 -----VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFC-ICFITVGMILEIIVMFPIQHRLYR----DRIN--MLSVT-- 277 (831)
Q Consensus 213 -----~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~l~--~l~~~-- 277 (831)
..|.+.|+..+++.++ +++|-+-.++-+..-+ ++++++...+.-+..|. ...... .++. .++.+
T Consensus 188 ita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~~Tl~p~a~y~-~g~~~~i~~LiALlV~LIPTTIG 266 (681)
T COG2216 188 ITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLAVATLYPFAIYS-GGGAASVTVLVALLVCLIPTTIG 266 (681)
T ss_pred EEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHHHHhhhhHHHHc-CCCCcCHHHHHHHHHHHhcccHH
Confidence 6788999999998874 7788665544432211 11111101100011111 011111 1111 11111
Q ss_pred ------HHHHHHhhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccC
Q 003313 278 ------LAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLEN 351 (831)
Q Consensus 278 ------l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~ 351 (831)
=-.|+.|+.+.|++-++..++|.+|.+|++..|||||+|.|+-.-.+++ ...+.+.+++...|..++-..+
T Consensus 267 gLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~---p~~gv~~~~la~aa~lsSl~De 343 (681)
T COG2216 267 GLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFI---PVPGVSEEELADAAQLASLADE 343 (681)
T ss_pred HHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhhee---cCCCCCHHHHHHHHHHhhhccC
Confidence 1126789999999999999999999999999999999999987777766 3567888888887776665433
Q ss_pred CChHHHHHHHHhCChH-HHh-hccc-eeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccCchh-hHHHHHHH
Q 003313 352 QDAIDAAIINMLADPK-EAR-ANIN-EVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEE-IGGKVHEI 427 (831)
Q Consensus 352 ~~~~~~ai~~~~~~~~-~~~-~~~~-~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~~~-~~~~~~~~ 427 (831)
.|--++++..+.+.. +.+ +... ...+.||+.+.+++.+-. +++ ..+.|||.+.+.+..++... .++.++..
T Consensus 344 -TpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~ 418 (681)
T COG2216 344 -TPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDLDAA 418 (681)
T ss_pred -CCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHHHHH
Confidence 566677777654221 111 1111 357899998777665432 233 56789999999987764433 78889999
Q ss_pred HHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC
Q 003313 428 INKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLG 507 (831)
Q Consensus 428 ~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~g 507 (831)
.++.++.|-+.++++.++ +++|++.++|-+||+.+|-+.+||+.||+.+|+||||+.||..||++.|
T Consensus 419 ~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAG 485 (681)
T COG2216 419 VDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAG 485 (681)
T ss_pred HHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhC
Confidence 999999999999999877 8999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecC
Q 003313 508 IGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAG 587 (831)
Q Consensus 508 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~ 587 (831)
++. ..++++||+|.++++.-|.+|+.|+|+|||+||+|||.+||||+||.+
T Consensus 486 VDd-----------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNs 536 (681)
T COG2216 486 VDD-----------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNS 536 (681)
T ss_pred chh-----------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhcc
Confidence 963 589999999999999999999999999999999999999999999999
Q ss_pred chHHHhhhcCEEEeCCChhHHHHHHHHhHHHHH
Q 003313 588 ATEAARGAADIVLTEPGLSVICSAVLTSRTVFQ 620 (831)
Q Consensus 588 ~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~ 620 (831)
|+++|||++.+|=+|.|...+.+.++.|++..-
T Consensus 537 GTqAAkEAaNMVDLDS~PTKlievV~IGKqlLi 569 (681)
T COG2216 537 GTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLI 569 (681)
T ss_pred ccHHHHHhhcccccCCCccceehHhhhhhhhee
Confidence 999999999999999999999999999998653
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-27 Score=244.86 Aligned_cols=193 Identities=34% Similarity=0.514 Sum_probs=156.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCe-EEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEEe-cCCeEE
Q 003313 107 IVCLLIINSSISFIEESNAENATAALMAHLTPK-TKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLE-GDPLKI 184 (831)
Q Consensus 107 i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~-~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~-g~~~~V 184 (831)
++++++++.+++.++++|+++..+++++..+++ ++|.|||++++++++||+|||+|.+++||++||||++++ | .+.|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g-~~~v 80 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESG-SAYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESS-EEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecc-cccc
Confidence 567788889999999999999999998888887 999999999999999999999999999999999999999 7 8999
Q ss_pred EcccccCCCcccccc-----CCCeeeecceeee-----------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHHHHH
Q 003313 185 DQSELTGESLTVTKE-----TGDEVFSGLTCKH-----------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCICF 247 (831)
Q Consensus 185 des~LTGEs~pv~K~-----~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~ 247 (831)
|||.+|||+.|+.|. .|+.+|+||.+.+ .+|..|++.+.....+ +++++++.++++..++..+
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 9999999999887 6788888888886665 5689999999998886554
Q ss_pred HHHHHHHHHHHHhh-hchhhH----hhHHH------------HHHHHHHHHHHhhhcCceEEccchhhhh
Q 003313 248 ITVGMILEIIVMFP-IQHRLY----RDRIN------------MLSVTLAIASYRLSQRGAITKRMTAIEE 300 (831)
Q Consensus 248 ~~~~~~~~~~~~~~-~~~~~~----~~~l~------------~l~~~l~~~~~~l~~~~ilvk~~~~le~ 300 (831)
+++..++.+++++. .....+ ...+. .+++++.+++.+|+++|+++|+++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 44433333322222 011111 11111 4566778899999999999999999995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-25 Score=231.01 Aligned_cols=211 Identities=29% Similarity=0.372 Sum_probs=152.6
Q ss_pred ceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhccceeEEecCCC
Q 003313 304 MDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNP 383 (831)
Q Consensus 304 v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~f~s 383 (831)
|++||||||||||+|++.+ . . .+.+.++..+...+..++ ||+..++..+....... .... +|..
T Consensus 1 i~~i~fDktGTLt~~~~~v---~---~---~~~~~~~~~~~~~~~~s~-~p~~~~~~~~~~~~~~~-~~~~-----~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---A---P---PSNEAALAIAAALEQGSE-HPIGKAIVEFAKNHQWS-KSLE-----SFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---E---S---CSHHHHHHHHHHHHCTST-SHHHHHHHHHHHHHHHH-SCCE-----EEEE
T ss_pred CeEEEEecCCCcccCeEEE---E---e---ccHHHHHHHHHHhhhcCC-Ccchhhhhhhhhhccch-hhhh-----hhee
Confidence 6899999999999999999 1 1 456666666666555555 99999998876542211 1111 1111
Q ss_pred CCceEEEEEEcCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeee
Q 003313 384 VDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGL 463 (831)
Q Consensus 384 ~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~ 463 (831)
...++.... .++. +. |+++.+....... ............+|.+.+.++.. .+++|.
T Consensus 65 ~~~~~~~~~--~~~~---~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGD--VDGI---YL-GSPEWIHELGIRV----ISPDLVEEIQESQGRTVIVLAVN-------------LIFLGL 121 (215)
T ss_dssp ETTTEEEEE--EHCH---EE-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCEEEEES-------------HEEEEE
T ss_pred eeecccccc--cccc---cc-ccchhhhhccccc----cccchhhhHHHhhCCcccceeec-------------CeEEEE
Confidence 111111111 1122 22 8888876644321 11112222334566666666653 389999
Q ss_pred ccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEE
Q 003313 464 LPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTD 543 (831)
Q Consensus 464 i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 543 (831)
+.+.|++|++++++|++|+++|++++|+|||+..++..+++++||... .+|++
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~---------------------------~v~a~ 174 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS---------------------------IVFAR 174 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE---------------------------EEEES
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc---------------------------ccccc
Confidence 999999999999999999999999999999999999999999999421 27999
Q ss_pred e--ChHHH--HHHHHHHhhcCCEEEEEcCCccChhhhccCC
Q 003313 544 V--FAEHK--YEIVKILQEKKHVVGMTGDGVNDAPALKKAD 580 (831)
Q Consensus 544 ~--~P~~K--~~iv~~l~~~g~~v~~iGDG~ND~~al~~Ad 580 (831)
+ +|++| .++++.+|.+++.|+|+|||.||++|+++||
T Consensus 175 ~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 175 VIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred ccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 9 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.6e-15 Score=132.84 Aligned_cols=122 Identities=27% Similarity=0.333 Sum_probs=107.9
Q ss_pred eeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhc
Q 003313 459 SFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKA 538 (831)
Q Consensus 459 ~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (831)
...+.++---++=++++++|++|++. +++++.|||...+....|+..|++..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 56778888888899999999999999 99999999999999999999998642
Q ss_pred CcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe-c--CchHHHhhhcCEEEeCCChhHHHH
Q 003313 539 DGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV-A--GATEAARGAADIVLTEPGLSVICS 610 (831)
Q Consensus 539 ~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~-~--~~~~~a~~aadivl~~~~~~~i~~ 610 (831)
++|+...|+.|.++++.|+++++.|.|+|||.||.+||++||+||.. + +.++.+.++||+++.+ ...+++
T Consensus 72 rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ld 144 (152)
T COG4087 72 RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILD 144 (152)
T ss_pred eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHH
Confidence 47999999999999999999999999999999999999999999987 3 6677788999999843 444443
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.5e-12 Score=142.77 Aligned_cols=210 Identities=20% Similarity=0.235 Sum_probs=152.2
Q ss_pred CceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCC------CccccCCc--------
Q 003313 457 PRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYP------SSLLLGRD-------- 522 (831)
Q Consensus 457 ~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~------~~~~~~~~-------- 522 (831)
+-.|+|++....+.|++....|+.|.++-|+.+-.|-.+....+-.|+++||...... .+...|.+
T Consensus 814 GQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~ 893 (1354)
T KOG4383|consen 814 GQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQF 893 (1354)
T ss_pred cchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhh
Confidence 4579999999999999999999999999999999999999999999999999652110 00000000
Q ss_pred ---------------CCCC----------------------------C-----------------cccHHHHHHhcCcEE
Q 003313 523 ---------------KDEN----------------------------E-----------------ALPVDELIEKADGFT 542 (831)
Q Consensus 523 ---------------~~~~----------------------------~-----------------~~~~~~~~~~~~v~~ 542 (831)
.++. + .++++++..-+..|.
T Consensus 894 a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFT 973 (1354)
T KOG4383|consen 894 AAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFT 973 (1354)
T ss_pred hccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeecc
Confidence 0000 0 001222222234699
Q ss_pred EeChHHHHHHHHHHhhcCCEEEEEcCCcc--ChhhhccCCeeEEecC-------------chHH--Hh------------
Q 003313 543 DVFAEHKYEIVKILQEKKHVVGMTGDGVN--DAPALKKADIGIAVAG-------------ATEA--AR------------ 593 (831)
Q Consensus 543 ~~~P~~K~~iv~~l~~~g~~v~~iGDG~N--D~~al~~AdvgIa~~~-------------~~~~--a~------------ 593 (831)
+++|+.-.++++.+|+.|++|+++|...| ..-.+-+||++||+.. ++.. |+
T Consensus 974 DcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSg 1053 (1354)
T KOG4383|consen 974 DCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISG 1053 (1354)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecc
Confidence 99999999999999999999999999888 4445679999999841 1111 11
Q ss_pred ----hhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccCCCChHHHHHHHHhhccc
Q 003313 594 ----GAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFV-LLALIWEYDFPPFMVLIIAVLNDGT 666 (831)
Q Consensus 594 ----~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~ 666 (831)
-++|+.+.....-++.++|+-+|....-+|+++.|.+.......+..+ -.+++.|..|+.-+++|...+.-.+
T Consensus 1054 qLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~Pl 1131 (1354)
T KOG4383|consen 1054 QLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPL 1131 (1354)
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHH
Confidence 124444544556678889999999999999999999988775544443 4556677888888999998887543
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.1e-12 Score=108.61 Aligned_cols=67 Identities=36% Similarity=0.536 Sum_probs=61.4
Q ss_pred cccCCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCccCC-CCCcHHHHHHHHHHhHHHHHHHHHHHHH
Q 003313 22 LARLPLDEVFGQLGTT-RQGLSSEDAEVRLKFFGSNKLEK-KPENKFLKFLSFMWNPLSWVMETAALMA 88 (831)
Q Consensus 22 ~~~~~~~~~~~~l~~~-~~GLs~~~~~~r~~~~G~N~i~~-~~~~~~~~~~~~~~~~~~~~l~i~ail~ 88 (831)
||.++++++++.|+++ .+|||++|+++|+++||+|+++. ++++.|+.|+++|++|+.++|++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 7999999999999976 89999999999999999999965 5678899999999999999999999886
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.7e-11 Score=121.15 Aligned_cols=166 Identities=14% Similarity=0.146 Sum_probs=114.4
Q ss_pred cCCCChHHHHHHHHhhccc-hhccccCCCCCC-----CCCC--ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 003313 648 EYDFPPFMVLIIAVLNDGT-IITISKGRVKSS-----LRPD--GWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFET 719 (831)
Q Consensus 648 ~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~-----~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 719 (831)
|.|++|+|++|+|+++|.+ ++++++|+++++ ||++ +...++++...+..|++++++++..|++....
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~----- 75 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI----- 75 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 5789999999999999998 699999988764 2211 22246677778999999999999888766531
Q ss_pred cccccc--CCCcHHHHHHHHHHHHHHHHHHHhhhhccCCCC-CC--c-CchHHHHHHHHHHHHHHHHHHHhhh--ccccc
Q 003313 720 HFHVRS--LSSNTEEISSAVHLQVSIISQALIFVTRSQSWS-FL--E-RPGALLMCAFVLAQLVATLIAVYAH--ISFAY 791 (831)
Q Consensus 720 ~~~~~~--~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~-~~--~-~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~ 791 (831)
+|... ...+...++|++|.+++++|.++++.+|+.+.+ +. + ..|++++.+++++.++..++ .|.+ -..++
T Consensus 76 -~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i-~~~P~~~~~f~ 153 (182)
T PF00689_consen 76 -FGWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILI-VYVPGLNRIFG 153 (182)
T ss_dssp -TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHH-HHSTTHHHHST
T ss_pred -cccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHH-hcchhhHhhhc
Confidence 12110 011245689999999999999999999996532 22 1 13556666666666554444 5543 33577
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 792 ISGIGWGWAGVIWLYSLVFYILLDIIKFT 820 (831)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~e~~k~~ 820 (831)
+.++++.+|+.+++.+++.++++|++|++
T Consensus 154 ~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 154 TAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp ----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 88888888888899999999999999985
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.1e-10 Score=119.48 Aligned_cols=66 Identities=26% Similarity=0.238 Sum_probs=57.9
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
.|..-++.+.+. .+.|+++|||.||.+||+.|++|+||+||.+.+|++||+|+.+++-+++.++|+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 466666666543 356999999999999999999999999999999999999999999999998885
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.2e-09 Score=116.07 Aligned_cols=153 Identities=24% Similarity=0.236 Sum_probs=107.7
Q ss_pred eeccccCC-CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC---------CCccccCCcC--------
Q 003313 462 GLLPLFDP-PRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY---------PSSLLLGRDK-------- 523 (831)
Q Consensus 462 G~i~~~D~-lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~---------~~~~~~~~~~-------- 523 (831)
|.+.-.|. +.+.+.++|+++++.|++++++||++...+..+.+++|+..... ..+.+....+
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 33444444 88999999999999999999999999999999999999974110 0000000000
Q ss_pred ----------------------------------------------CCCC----------cccHHHH---HHh-----cC
Q 003313 524 ----------------------------------------------DENE----------ALPVDEL---IEK-----AD 539 (831)
Q Consensus 524 ----------------------------------------------~~~~----------~~~~~~~---~~~-----~~ 539 (831)
.... .+.+.+. +.+ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0000 0111111 111 01
Q ss_pred cE-------EEeChH--HHHHHHHHHhh-cCC---EEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChh
Q 003313 540 GF-------TDVFAE--HKYEIVKILQE-KKH---VVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLS 606 (831)
Q Consensus 540 v~-------~~~~P~--~K~~iv~~l~~-~g~---~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~ 606 (831)
.+ ..+.|. +|..-++.+.+ .|- .|+++||+.||.+||+.|+.||||+||++.+|+.||++...++-+
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 11 333443 68888877766 343 499999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 003313 607 VICSAVLT 614 (831)
Q Consensus 607 ~i~~~i~~ 614 (831)
+|.+++++
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99998864
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.6e-09 Score=112.71 Aligned_cols=151 Identities=25% Similarity=0.270 Sum_probs=105.3
Q ss_pred eccccCC-CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC--CCccc---------cCCcCC------
Q 003313 463 LLPLFDP-PRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY--PSSLL---------LGRDKD------ 524 (831)
Q Consensus 463 ~i~~~D~-lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~--~~~~~---------~~~~~~------ 524 (831)
.+.-.|. +.+.+.++|+++++.|++++++||++...+..+.+++|+..... ++..+ ....++
T Consensus 13 TLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~ 92 (230)
T PRK01158 13 TITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAY 92 (230)
T ss_pred CcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHH
Confidence 3333444 77899999999999999999999999999999999999864211 01100 000000
Q ss_pred ---------------C---------------CCcccHHHHHHhcC--c-------EEEeChH--HHHHHHHHHhhc----
Q 003313 525 ---------------E---------------NEALPVDELIEKAD--G-------FTDVFAE--HKYEIVKILQEK---- 559 (831)
Q Consensus 525 ---------------~---------------~~~~~~~~~~~~~~--v-------~~~~~P~--~K~~iv~~l~~~---- 559 (831)
. ...+++.+.+++.. + +....|. .|..-++.+.+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~ 172 (230)
T PRK01158 93 SELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGID 172 (230)
T ss_pred HHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCC
Confidence 0 00011222222211 1 1233333 377777666553
Q ss_pred CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 560 KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 560 g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
...++++||+.||.+|++.|++|+||+|+.+.+|+.||+|+.+++-+++.++++
T Consensus 173 ~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 173 PEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred HHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 356999999999999999999999999999999999999999999999998875
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=6.4e-10 Score=118.83 Aligned_cols=145 Identities=15% Similarity=0.147 Sum_probs=100.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC--CC--------ccccCCcCC--------------
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY--PS--------SLLLGRDKD-------------- 524 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~--~~--------~~~~~~~~~-------------- 524 (831)
.+.+.+.++|++++++|++++++||++...+..+.+++|+..... ++ +.+....++
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 588899999999999999999999999999999999999853210 00 000000000
Q ss_pred --------------------------------------CC------------CcccHHH---HHHh-----cCc------
Q 003313 525 --------------------------------------EN------------EALPVDE---LIEK-----ADG------ 540 (831)
Q Consensus 525 --------------------------------------~~------------~~~~~~~---~~~~-----~~v------ 540 (831)
.. +.+.+++ .+.+ ..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 00 0000011 1110 000
Q ss_pred EEEeChH--HHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCE--EEeCCChhHHHHHH
Q 003313 541 FTDVFAE--HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADI--VLTEPGLSVICSAV 612 (831)
Q Consensus 541 ~~~~~P~--~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadi--vl~~~~~~~i~~~i 612 (831)
+..++|. .|..-++.+.+. .+.|+++|||.||.+||+.|+.||||+||.+.+|++||. |+.+++-+++.++|
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l 258 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYL 258 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHH
Confidence 1233333 487777777653 357999999999999999999999999999999999996 77788889998887
Q ss_pred H
Q 003313 613 L 613 (831)
Q Consensus 613 ~ 613 (831)
+
T Consensus 259 ~ 259 (272)
T PRK15126 259 T 259 (272)
T ss_pred H
Confidence 5
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.03 E-value=7.4e-10 Score=90.18 Aligned_cols=60 Identities=37% Similarity=0.607 Sum_probs=53.5
Q ss_pred HhCCC-CCCCCHHHHHHHHHhcCCCccCCCC-CcHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Q 003313 33 QLGTT-RQGLSSEDAEVRLKFFGSNKLEKKP-ENKFLKFLSFMWNPLSWVMETAALMAIALA 92 (831)
Q Consensus 33 ~l~~~-~~GLs~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~i~ail~~~~~ 92 (831)
.++++ .+|||++|+++|+++||+|+++.++ .++|+.++++|++|+.++++++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 35666 4599999999999999999998875 788999999999999999999999998863
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.2e-09 Score=112.42 Aligned_cols=143 Identities=21% Similarity=0.252 Sum_probs=101.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC--CCccccCCc------------------------
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY--PSSLLLGRD------------------------ 522 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~--~~~~~~~~~------------------------ 522 (831)
++.+++.++|++|++.|++++++||++...+..+++++++..... ++..+...+
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 478899999999999999999999999999999999999864211 111110000
Q ss_pred --CC-C------------CCcccHHHHHHhcCc-------EEEeCh--HHHHHHHHHHhhc----CCEEEEEcCCccChh
Q 003313 523 --KD-E------------NEALPVDELIEKADG-------FTDVFA--EHKYEIVKILQEK----KHVVGMTGDGVNDAP 574 (831)
Q Consensus 523 --~~-~------------~~~~~~~~~~~~~~v-------~~~~~P--~~K~~iv~~l~~~----g~~v~~iGDG~ND~~ 574 (831)
.. . ...+.+.+.+.+..+ +..++| .+|...++.+.+. ...++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 00 0 000112222222111 123333 3688888777653 345999999999999
Q ss_pred hhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHH
Q 003313 575 ALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSA 611 (831)
Q Consensus 575 al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~ 611 (831)
|++.|++|+||++|.+.+|+.||+|+.+++-+++.++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999988888887765
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.7e-09 Score=115.08 Aligned_cols=66 Identities=20% Similarity=0.165 Sum_probs=56.7
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcC--EEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAAD--IVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aad--ivl~~~~~~~i~~~i~ 613 (831)
.|..-++.+.+. .+.|+++|||.||.+||+.|+.|+||+||.+.+|+.|| .|+.+++-+++.++++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 477666666543 35699999999999999999999999999999999988 7888888999998885
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.3e-09 Score=115.95 Aligned_cols=127 Identities=21% Similarity=0.237 Sum_probs=98.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCC-----CccccCCcCCCCCcccHHHHHHhcCcEEE
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYP-----SSLLLGRDKDENEALPVDELIEKADGFTD 543 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 543 (831)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+.....+ ...+.+.... .-
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g-----------------~i 243 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLG-----------------DI 243 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecC-----------------cc
Confidence 5789999999999999999999999998888899999998531110 0000000000 00
Q ss_pred eChHHHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 544 VFAEHKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 544 ~~P~~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
+..+.|.+.++.+.++ .+.+.++|||.||.+|++.|++|||| ++.+..++.||.++..++++++..++-
T Consensus 244 v~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 244 VDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred CCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 2235788888777653 35799999999999999999999999 889999999999999999998887653
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.9e-09 Score=106.92 Aligned_cols=130 Identities=15% Similarity=0.106 Sum_probs=96.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccC-CcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLG-RDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+.....+.-.+.+ ... +. .....++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~---tG------------~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRV---VG------------YQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCee---EC------------eeecCcc
Confidence 68999999999999975 9999999999999999999999632111101100 000 00 0113577
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHh
Q 003313 548 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTS 615 (831)
Q Consensus 548 ~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~g 615 (831)
+|...++.+++.|..+.++|||.||.+|++.||+||++.....+.+++-|+-.. .+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~-~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcc-cCHHHHHHHHHHH
Confidence 899999999888888999999999999999999999998665555555555544 4577777777654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.6e-09 Score=108.80 Aligned_cols=145 Identities=21% Similarity=0.221 Sum_probs=100.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC--CCccccC---------CcCC-------------
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY--PSSLLLG---------RDKD------------- 524 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~--~~~~~~~---------~~~~------------- 524 (831)
.+.+.+.++|+++++.|++++++||++...+..+.+++|+..... +...+.. ...+
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 477889999999999999999999999999999999999643110 0000000 0000
Q ss_pred -----------C---------CCcccHHHHHHhcC---------cEEEeCh--HHHHHHHHHHhhc----CCEEEEEcCC
Q 003313 525 -----------E---------NEALPVDELIEKAD---------GFTDVFA--EHKYEIVKILQEK----KHVVGMTGDG 569 (831)
Q Consensus 525 -----------~---------~~~~~~~~~~~~~~---------v~~~~~P--~~K~~iv~~l~~~----g~~v~~iGDG 569 (831)
. .+.+.......+.. .+..+.| .+|..-++.+.++ .+.++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0 00011112222211 1223333 3687777777553 3579999999
Q ss_pred ccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhH----HHHHHH
Q 003313 570 VNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSV----ICSAVL 613 (831)
Q Consensus 570 ~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~----i~~~i~ 613 (831)
.||.+|++.|++|+||+|+.+.+|+.||.|..+++-.+ +.++++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999998888888 666553
|
catalyze the same reaction as SPP. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.9e-09 Score=122.09 Aligned_cols=65 Identities=26% Similarity=0.372 Sum_probs=55.7
Q ss_pred HHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 549 KYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 549 K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
|..-++.+.+. .+.|+++|||.||.+||+.|+.|||||||.+.+|++||+|+.+++-++|.++|+
T Consensus 508 KG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 508 KGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 55555555442 246999999999999999999999999999999999999999999999998886
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=7.3e-09 Score=110.63 Aligned_cols=66 Identities=26% Similarity=0.338 Sum_probs=56.3
Q ss_pred HHHHHHHHHhhc-C---CEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQEK-K---HVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~~-g---~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
+|...++.+.++ | +.++++||+.||.+|++.|++|+|||++.+..|+.||+|+.+++-+++.++++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466655555432 2 46999999999999999999999999999999999999999999999998885
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.89 E-value=5.7e-09 Score=102.08 Aligned_cols=104 Identities=19% Similarity=0.191 Sum_probs=84.0
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEe--ChHHHHHHH
Q 003313 476 DTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDV--FAEHKYEIV 553 (831)
Q Consensus 476 ~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~P~~K~~iv 553 (831)
.+|+.|+++|+++.++|+.+...+....+.+|+.. .|... .|+.-..++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~-----------------------------~f~~~kpkp~~~~~~~ 91 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR-----------------------------FHEGIKKKTEPYAQML 91 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE-----------------------------EEecCCCCHHHHHHHH
Confidence 57999999999999999999999999999999852 11111 234444555
Q ss_pred HHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHH
Q 003313 554 KILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVI 608 (831)
Q Consensus 554 ~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i 608 (831)
+.++-..+.++++||+.||.+|++.|++++||+++.+.+++.|++|+..++-.+.
T Consensus 92 ~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 92 EEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred HHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCH
Confidence 5554445679999999999999999999999999999999999999876654443
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.7e-09 Score=109.57 Aligned_cols=146 Identities=20% Similarity=0.243 Sum_probs=101.7
Q ss_pred cCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC--CCccc--------cCCcCCC-----------
Q 003313 467 FDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY--PSSLL--------LGRDKDE----------- 525 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~--~~~~~--------~~~~~~~----------- 525 (831)
...+.+++.+++++++++|+++++.||+....+..+.+++++..... ++..+ ....++.
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 34577899999999999999999999999999999999999863110 00000 0000000
Q ss_pred ------------------C-------------------------------------CcccHHHH-------HHhc-----
Q 003313 526 ------------------N-------------------------------------EALPVDEL-------IEKA----- 538 (831)
Q Consensus 526 ------------------~-------------------------------------~~~~~~~~-------~~~~----- 538 (831)
. +.+.++.+ ....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 0 00011111 1110
Q ss_pred --CcEEEeCh--HHHHHHHHHHhh----cCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHH
Q 003313 539 --DGFTDVFA--EHKYEIVKILQE----KKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICS 610 (831)
Q Consensus 539 --~v~~~~~P--~~K~~iv~~l~~----~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~ 610 (831)
.-+..++| ..|..-++.+.+ ..+.++++||+.||.+||+.|+.|+||+++++..++.||.++...+-.++.+
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHH
Confidence 11233444 368887777765 2467999999999999999999999999999999999999999887788887
Q ss_pred HH
Q 003313 611 AV 612 (831)
Q Consensus 611 ~i 612 (831)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 64
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.7e-08 Score=104.22 Aligned_cols=128 Identities=24% Similarity=0.278 Sum_probs=92.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccC-CcCCCCCcccHHHHHHhcCcEEE-eCh
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLG-RDKDENEALPVDELIEKADGFTD-VFA 546 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~-~~P 546 (831)
++++++.+.++.|++.|+++.++||.....+..+.+.+|+... ........ .... . .+... ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~~~~~~---~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVEDGKLT---G----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEECCEEE---E----------EecCcccCC
Confidence 5899999999999999999999999999999999999998631 11100000 0000 0 00000 112
Q ss_pred HHHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHH
Q 003313 547 EHKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSA 611 (831)
Q Consensus 547 ~~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~ 611 (831)
..|..+++.+.++ .+.+.++||+.||.+|++.|+++++++ +.+..+++||.++.++++..+...
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 3366666655443 246889999999999999999999985 567788999999999998877653
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=98.81 E-value=1e-08 Score=89.62 Aligned_cols=66 Identities=29% Similarity=0.478 Sum_probs=54.9
Q ss_pred cCCChHHHHHHHHhCC------hHHHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccC
Q 003313 350 ENQDAIDAAIINMLAD------PKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQE 416 (831)
Q Consensus 350 ~~~~~~~~ai~~~~~~------~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~ 416 (831)
..++|.|.|++.++.. ....+..+++++.+||+|++|+|+++++ .++.+.+++|||||.|+++|+.
T Consensus 19 ~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 19 IIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred ccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 3468999999988743 3456789999999999999999999998 3345667999999999999973
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.2e-08 Score=97.12 Aligned_cols=106 Identities=26% Similarity=0.288 Sum_probs=81.6
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEe--ChHHHHHHHH
Q 003313 477 TIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDV--FAEHKYEIVK 554 (831)
Q Consensus 477 ~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~P~~K~~iv~ 554 (831)
+|++|++.|+++.++||++...+..+.+++|+... |... .|+-..++++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~-----------------------------~~~~~~k~~~~~~~~~ 86 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL-----------------------------YQGQSNKLIAFSDILE 86 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE-----------------------------EecccchHHHHHHHHH
Confidence 89999999999999999999999999999998531 1111 1222233333
Q ss_pred HHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhH-HHHH
Q 003313 555 ILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSV-ICSA 611 (831)
Q Consensus 555 ~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~-i~~~ 611 (831)
.+.-..+.++|+||+.||.+|++.|+++++|.++.+..+..||+++.++.-++ +.++
T Consensus 87 ~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~ 144 (154)
T TIGR01670 87 KLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREV 144 (154)
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHH
Confidence 33334467999999999999999999999999988899999999998765333 4443
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.5e-08 Score=105.60 Aligned_cols=64 Identities=30% Similarity=0.308 Sum_probs=56.3
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHH
Q 003313 548 HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSA 611 (831)
Q Consensus 548 ~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~ 611 (831)
.|..-++.+.+. .+.++++||+.||.+|++.|+.|+||+++++.+|+.||+++.+++-+++.++
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 588888777663 3579999999999999999999999999999999999999998888888764
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.2e-07 Score=100.35 Aligned_cols=66 Identities=23% Similarity=0.267 Sum_probs=53.6
Q ss_pred HHHHHHHHHhh----c--CCEEEEEcCCccChhhhccCCeeEEecCch---HHHhhh--c-CEEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQE----K--KHVVGMTGDGVNDAPALKKADIGIAVAGAT---EAARGA--A-DIVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~----~--g~~v~~iGDG~ND~~al~~AdvgIa~~~~~---~~a~~a--a-divl~~~~~~~i~~~i~ 613 (831)
.|..-++.+.+ . .+.++++||+.||.+|++.|+.||||+|+. +..|+. | ++|..+++-+++.++++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 36555555543 3 567999999999999999999999999987 468886 4 58888999999998886
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.66 E-value=8.9e-08 Score=97.55 Aligned_cols=113 Identities=23% Similarity=0.212 Sum_probs=84.7
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCC-----ccccCCcCCCCCcccHHHHHHhcCcEE
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPS-----SLLLGRDKDENEALPVDELIEKADGFT 542 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~ 542 (831)
.+++|++.+.++.++++|++|+++||-...-+..+|+++|++....+. ..+.| .+..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG------------------~v~g 137 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTG------------------RVVG 137 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEec------------------eeee
Confidence 578999999999999999999999999999999999999997532111 11111 1233
Q ss_pred -EeChHHHHHHHHHHhh-cCC---EEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEE
Q 003313 543 -DVFAEHKYEIVKILQE-KKH---VVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIV 599 (831)
Q Consensus 543 -~~~P~~K~~iv~~l~~-~g~---~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadiv 599 (831)
.+..+.|...++.+.+ .|. .+.++|||.||.|||+.|+.++++..... .+..|+..
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~-l~~~a~~~ 198 (212)
T COG0560 138 PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPK-LRALADVR 198 (212)
T ss_pred eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHH-HHHHHHHh
Confidence 3445788888866655 354 49999999999999999999999975443 33344433
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.9e-07 Score=99.58 Aligned_cols=66 Identities=24% Similarity=0.194 Sum_probs=52.0
Q ss_pred HHHHHHHHHhh-------cCCEEEEEcCCccChhhhccCCeeEEecCch-HH-----HhhhcCEEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQE-------KKHVVGMTGDGVNDAPALKKADIGIAVAGAT-EA-----ARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~-------~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~-~~-----a~~aadivl~~~~~~~i~~~i~ 613 (831)
+|..-++.+.+ ....|+++|||.||.+||+.|++|||||++. +. .+..+|+++...+-+++.++++
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 46655555543 3467999999999999999999999999554 21 3457999999999999998886
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.2e-07 Score=94.74 Aligned_cols=109 Identities=26% Similarity=0.322 Sum_probs=83.1
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHH
Q 003313 476 DTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKI 555 (831)
Q Consensus 476 ~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~ 555 (831)
.+|+.|+++|+++.++||.....+..+++++|+... |. ..++|...++.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~-----------------------------f~--g~~~k~~~l~~ 103 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL-----------------------------YQ--GQSNKLIAFSD 103 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee-----------------------------ec--CCCcHHHHHHH
Confidence 689999999999999999999999999999998521 11 11234444433
Q ss_pred Hh-h---cCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCC----hhHHHHHHHHh
Q 003313 556 LQ-E---KKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPG----LSVICSAVLTS 615 (831)
Q Consensus 556 l~-~---~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~----~~~i~~~i~~g 615 (831)
+. + ..+.++|+||+.||.+|++.|+++++++++.+..+..||+++..++ ...+.+.+...
T Consensus 104 ~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~ 171 (183)
T PRK09484 104 LLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLA 171 (183)
T ss_pred HHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHh
Confidence 32 2 3457999999999999999999999999888889999999996433 34444444333
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.8e-05 Score=88.79 Aligned_cols=101 Identities=17% Similarity=0.191 Sum_probs=75.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
|++|++.+.+++++++|+++.++|+-+...+..+++.+|+.+ .++..++ ..++.|+.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd-----~Vigsd~------------------~~~~kg~~ 128 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD-----GVFASDG------------------TTNLKGAA 128 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC-----EEEeCCC------------------ccccCCch
Confidence 478999999999999999999999999999999999999721 1111110 12355666
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHh
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAAR 593 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~ 593 (831)
|.+.++..... +.+.++||..||.++++.|+-.++++.+....+
T Consensus 129 K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~ 172 (479)
T PRK08238 129 KAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPGVAR 172 (479)
T ss_pred HHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHHHHH
Confidence 76554432222 225788999999999999999999986554443
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.53 E-value=2e-07 Score=86.45 Aligned_cols=115 Identities=27% Similarity=0.399 Sum_probs=91.1
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHH
Q 003313 476 DTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKI 555 (831)
Q Consensus 476 ~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~ 555 (831)
-.|+.|+++||++.++||++...+..-|+++||.. +| .--++|....+.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~-----------------------------~~--qG~~dK~~a~~~ 90 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH-----------------------------LY--QGISDKLAAFEE 90 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce-----------------------------ee--echHhHHHHHHH
Confidence 36899999999999999999999999999999952 11 112567776666
Q ss_pred Hhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCC----hhHHHHHHHHhHHHHHH
Q 003313 556 LQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPG----LSVICSAVLTSRTVFQI 621 (831)
Q Consensus 556 l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~----~~~i~~~i~~gR~~~~~ 621 (831)
+.++ -+.|+++||..||.|+|+..+.++|+.++.+..++.||+|+.... .+.+.+.|..++..++-
T Consensus 91 L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 91 LLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred HHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 6543 457999999999999999999999999999999999999987654 44455556555555443
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=5.5e-07 Score=91.83 Aligned_cols=127 Identities=20% Similarity=0.196 Sum_probs=90.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+.... ........+ .... -.....|+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f-~~~~~~~~~-~~i~------------~~~~~~p~~ 132 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLF-CHSLEVDED-GMIT------------GYDLRQPDG 132 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhh-cceEEECCC-CeEE------------Cccccccch
Confidence 4679999999999999 999999999999999999999985311 110000000 0000 000124678
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCE-EEeCCChhHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADI-VLTEPGLSVICSAV 612 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadi-vl~~~~~~~i~~~i 612 (831)
|...++.++..+..+.|+|||.||.+|.+.|++|+..+.+.+.....++. ++ +++..+...+
T Consensus 133 k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 133 KRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred HHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 88889999888899999999999999999999999987654444445565 43 4566665544
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.51 E-value=5.6e-07 Score=96.15 Aligned_cols=66 Identities=30% Similarity=0.394 Sum_probs=53.4
Q ss_pred HHHHHHHHHhh----cC-CEEEEEcCCccChhhhccCCeeEEecCchHHHh----hhc-CEEE--eCCChhHHHHHHH
Q 003313 548 HKYEIVKILQE----KK-HVVGMTGDGVNDAPALKKADIGIAVAGATEAAR----GAA-DIVL--TEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~----~g-~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~----~aa-divl--~~~~~~~i~~~i~ 613 (831)
.|..-++.+.+ .. +.|+++||+.||.+|++.|++|+||+||.+.+| ++| +.+. ..++-+++.++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 46555555543 35 889999999999999999999999999999999 666 6777 4666788888775
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.43 E-value=7.4e-07 Score=90.40 Aligned_cols=117 Identities=24% Similarity=0.323 Sum_probs=82.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
+++|++.+.++.|++.|+++.++|+-....+..+++.+|+... ......... ..... -..+....|..
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~-~~~~~~~~~-~g~~~----------p~~~~~~~~~~ 147 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV-YSNELVFDE-KGFIQ----------PDGIVRVTFDN 147 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE-EEEEEEEcC-CCeEe----------cceeeEEcccc
Confidence 5889999999999999999999999999999999999997531 111111100 00000 00122344566
Q ss_pred HHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcC
Q 003313 549 KYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAAD 597 (831)
Q Consensus 549 K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aad 597 (831)
|...++.+.++ .+.+.++||+.||.+|++.|+++++++.+....+.++|
T Consensus 148 k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 148 KGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 77776665443 34699999999999999999999999865555555555
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.31 E-value=3.6e-06 Score=86.43 Aligned_cols=135 Identities=13% Similarity=0.041 Sum_probs=87.5
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCc-cccCCcCCCCCcccHHHHHHhcCcE--E-E
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSS-LLLGRDKDENEALPVDELIEKADGF--T-D 543 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~--~-~ 543 (831)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++......... .+.+......... -..+ . .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~--------~~~~~~~~~ 140 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH--------PCDGTCQNQ 140 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC--------CCccccccC
Confidence 4689999999999999999999999999988888888875432221111 1111111000000 0000 0 1
Q ss_pred eChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHh--hhcCEEEeCCChhHHHHHHH
Q 003313 544 VFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAAR--GAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 544 ~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~--~aadivl~~~~~~~i~~~i~ 613 (831)
+ ...|..+++.++...+.+.|+|||.||..|++.||+++|-+.-.+-.+ ..+.+.. ++|..+...++
T Consensus 141 c-g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 141 C-GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred C-CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 1 346999999988888889999999999999999999888552212111 1122222 56777776653
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.28 E-value=6.3e-06 Score=86.05 Aligned_cols=66 Identities=18% Similarity=0.224 Sum_probs=57.4
Q ss_pred HHHHHHHHHhhc-C---CEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcC----EEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQEK-K---HVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAAD----IVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~~-g---~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aad----ivl~~~~~~~i~~~i~ 613 (831)
.|...++.+.++ | ..++++||+.||.+|++.|+.||+|+++.+..|+.|| +|..+++-.++.++|+
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 688888777653 2 3689999999999999999999999999999999999 8877788889998885
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.23 E-value=1e-05 Score=83.64 Aligned_cols=124 Identities=23% Similarity=0.316 Sum_probs=83.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC-CCCCCcc-------ccCCcCCCCCcccHHHHHHhcCc
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGT-NMYPSSL-------LLGRDKDENEALPVDELIEKADG 540 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~v 540 (831)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. +...... +.+.... ..
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~--------------~~ 149 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDEN--------------EP 149 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCC--------------Cc
Confidence 377999999999999999999999999999999999999963 1111100 1110000 00
Q ss_pred EEEeChHHHHHHHHHHhhc--CCEEEEEcCCccChhhhcc--CCeeEEecCc--hHHHhhhcCEEEeCCChhHHHH
Q 003313 541 FTDVFAEHKYEIVKILQEK--KHVVGMTGDGVNDAPALKK--ADIGIAVAGA--TEAARGAADIVLTEPGLSVICS 610 (831)
Q Consensus 541 ~~~~~P~~K~~iv~~l~~~--g~~v~~iGDG~ND~~al~~--AdvgIa~~~~--~~~a~~aadivl~~~~~~~i~~ 610 (831)
...+..|.+.++.+.++ .+.++++||+.||..|.++ ++++++.+.+ .+.....+|+++. ++..+..
T Consensus 150 --~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~ 221 (224)
T PLN02954 150 --TSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIE 221 (224)
T ss_pred --ccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHH
Confidence 01123477777766553 3578999999999999877 5666666532 2334456899883 4665554
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.9e-06 Score=86.64 Aligned_cols=92 Identities=24% Similarity=0.305 Sum_probs=69.2
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH---H
Q 003313 472 HDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE---H 548 (831)
Q Consensus 472 ~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~---~ 548 (831)
+++.+.|+.++++|++++++||+....+..+++.+|++... +.+.+... .. ......+.+|. .
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~-----v~~~~~~~-~~--------~~~~~~~~~~~~~~~ 157 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN-----VIGNELFD-NG--------GGIFTGRITGSNCGG 157 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG-----EEEEEEEC-TT--------CCEEEEEEEEEEESH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-----EEEEeeee-cc--------cceeeeeECCCCCCc
Confidence 78889999999999999999999999999999999996421 11111100 00 01134555554 3
Q ss_pred HHHHHHHH------hhcCCEEEEEcCCccChhhhc
Q 003313 549 KYEIVKIL------QEKKHVVGMTGDGVNDAPALK 577 (831)
Q Consensus 549 K~~iv~~l------~~~g~~v~~iGDG~ND~~al~ 577 (831)
|.+.++.+ +.....+.++|||.||.||||
T Consensus 158 K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 158 KAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 455789999999999999986
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.15 E-value=4e-06 Score=80.54 Aligned_cols=109 Identities=23% Similarity=0.301 Sum_probs=74.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCC-CCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNM-YPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
.+-|++++.++.|++.|.++.++||--..-+..+|.++||+... +.+...-+..=+-. .++.. -.-....
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~---gfd~~------~ptsdsg 158 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYL---GFDTN------EPTSDSG 158 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCccc---ccccC------CccccCC
Confidence 35689999999999999999999999999999999999997522 11111110000000 00000 0001123
Q ss_pred HHHHHHHHHhhc--CCEEEEEcCCccChhhhccCCeeEEec
Q 003313 548 HKYEIVKILQEK--KHVVGMTGDGVNDAPALKKADIGIAVA 586 (831)
Q Consensus 548 ~K~~iv~~l~~~--g~~v~~iGDG~ND~~al~~AdvgIa~~ 586 (831)
.|.++++.+++. -..++|+|||.||.+|+..||.=|+.+
T Consensus 159 gKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 159 GKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 689999988874 457999999999999999976666654
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.4e-05 Score=84.06 Aligned_cols=146 Identities=17% Similarity=0.116 Sum_probs=97.6
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCC--C--CCccc-cCCc--------------------
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNM--Y--PSSLL-LGRD-------------------- 522 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~--~--~~~~~-~~~~-------------------- 522 (831)
.+..|...++++++++.|+.++++||+.....+.+.+++++..+. . .+..+ .+..
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 456788999999999999999999999999999999999875431 0 11111 0000
Q ss_pred ---------------CCCC--------Cccc----H---HHHHHhc--Cc--------EEEeCh--HHHHHHHHHHhhc-
Q 003313 523 ---------------KDEN--------EALP----V---DELIEKA--DG--------FTDVFA--EHKYEIVKILQEK- 559 (831)
Q Consensus 523 ---------------~~~~--------~~~~----~---~~~~~~~--~v--------~~~~~P--~~K~~iv~~l~~~- 559 (831)
.... ..+. + .+.+.+. .+ +..+.| ..|..-++.+.+.
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 0000 0001 1 1111111 11 113344 3688888877653
Q ss_pred ---CCEEEEEcCCccChhhhcc-CCeeEEecCchHHHhhhcC-------EEEeCCChhHHHHHHH
Q 003313 560 ---KHVVGMTGDGVNDAPALKK-ADIGIAVAGATEAARGAAD-------IVLTEPGLSVICSAVL 613 (831)
Q Consensus 560 ---g~~v~~iGDG~ND~~al~~-AdvgIa~~~~~~~a~~aad-------ivl~~~~~~~i~~~i~ 613 (831)
...|+++||+.||.+|++. ++.|++|+|+.+..|+.++ ++.....-+++.++++
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 4679999999999999998 7799999999998887543 6555556778888774
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.5e-05 Score=79.79 Aligned_cols=114 Identities=15% Similarity=0.089 Sum_probs=76.1
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEE-eCh
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTD-VFA 546 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~P 546 (831)
-++++++.+.++.|++.|+++.++|+.+......+.+..|+.... ..++ +.+.....+..+.....++..+.. ...
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~-~~~~~~~~~g~~~~~~~~~~~~~~~~~g 147 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIY-SNPASFDNDGRHIVWPHHCHGCCSCPCG 147 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEe-ccCceECCCCcEEEecCCCCccCcCCCC
Confidence 378899999999999999999999999999999999999885311 1111 111100000000000000111111 112
Q ss_pred HHHHHHHHHHhhc-CCEEEEEcCCccChhhhccCCeeEE
Q 003313 547 EHKYEIVKILQEK-KHVVGMTGDGVNDAPALKKADIGIA 584 (831)
Q Consensus 547 ~~K~~iv~~l~~~-g~~v~~iGDG~ND~~al~~AdvgIa 584 (831)
..|.++++.++++ .+.+.++|||.||..|.++||+-.|
T Consensus 148 ~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 148 CCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 3589999999887 8899999999999999999987655
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.7e-05 Score=81.76 Aligned_cols=134 Identities=14% Similarity=0.095 Sum_probs=83.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC-CCC-CccccCCcCCCCCcccHHHHHHhcCcE-EEeC
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTN-MYP-SSLLLGRDKDENEALPVDELIEKADGF-TDVF 545 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~ 545 (831)
+++|++.+.++.|++.|+++.++||-....+..+.+.+ +... ... ...+.+.........+ ...-+ .++
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p------~~~~~~~~~- 145 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHP------CDEHCQNHC- 145 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCC------ccccccccC-
Confidence 68999999999999999999999999999999998887 6431 110 0011111100000000 00000 001
Q ss_pred hHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHh--hhcCEEEeCCChhHHHHHH
Q 003313 546 AEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAAR--GAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 546 P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~--~aadivl~~~~~~~i~~~i 612 (831)
...|...++.++.....+.|+|||.||..|.+.||+.++-+.-.+.++ ..+.+.+ ++|..+...+
T Consensus 146 ~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 146 GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 124888888888877789999999999999999999777431112211 1233333 5577766655
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.03 E-value=9.6e-06 Score=80.44 Aligned_cols=101 Identities=23% Similarity=0.280 Sum_probs=69.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++++++.+.++.+++.|++++++||.....+..+++.+|+... ......... +..+.. ....-....+..
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~-~~~~~~~~~------~g~~~g---~~~~~~~~~~~~ 142 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDV-FANRLEFDD------NGLLTG---PIEGQVNPEGEC 142 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchh-eeeeEEECC------CCEEeC---ccCCcccCCcch
Confidence 3689999999999999999999999999999999999998631 111100000 000000 000001244578
Q ss_pred HHHHHHHHhhc----CCEEEEEcCCccChhhhccC
Q 003313 549 KYEIVKILQEK----KHVVGMTGDGVNDAPALKKA 579 (831)
Q Consensus 549 K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~A 579 (831)
|...++.++++ .+.+.++|||.||.+|++.|
T Consensus 143 K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 143 KGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 99888887654 35689999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=3.8e-05 Score=79.38 Aligned_cols=127 Identities=15% Similarity=0.100 Sum_probs=88.8
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
-++.|++.+.++.|++.|+++.++||........+.+..|+.... ...+...+.. ...-.|+
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~kp~~~ 153 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGDSLP----------------NKKPDPA 153 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCCCCC----------------CCCcChH
Confidence 357899999999999999999999999999999999999985321 1111111000 0011233
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCe-eEEecC----chHHHhhhcCEEEeCCChhHHHHHHHH
Q 003313 548 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVAG----ATEAARGAADIVLTEPGLSVICSAVLT 614 (831)
Q Consensus 548 ~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Adv-gIa~~~----~~~~a~~aadivl~~~~~~~i~~~i~~ 614 (831)
--...++.++...+.++++||+.||+.+.+.|++ +|.+.. ..+.....+++++ +++..+...+.+
T Consensus 154 ~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 154 PLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred HHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 3344555555566789999999999999999998 555532 3344455788887 678888877654
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.8e-05 Score=80.46 Aligned_cols=108 Identities=18% Similarity=0.137 Sum_probs=76.4
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcE-EEeCh
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGF-TDVFA 546 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~P 546 (831)
.++++++.+.++.+++.|++++++||.....+..+++.+|+..- ...+.....+ ..... .+. -.+.+
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~~-g~~~g----------~~~~~~~~g 153 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESED-GIYTG----------NIDGNNCKG 153 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcCC-CEEeC----------CccCCCCCC
Confidence 46889999999999999999999999999999999999998531 1111110000 00000 000 12345
Q ss_pred HHHHHHHHHHhh-cC---CEEEEEcCCccChhhhccCCeeEEecC
Q 003313 547 EHKYEIVKILQE-KK---HVVGMTGDGVNDAPALKKADIGIAVAG 587 (831)
Q Consensus 547 ~~K~~iv~~l~~-~g---~~v~~iGDG~ND~~al~~AdvgIa~~~ 587 (831)
+.|.+.++.+.+ .+ +.+.++||+.||.||++.|+.++++..
T Consensus 154 ~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 154 EGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred hHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 778877766544 33 368899999999999999999999863
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.92 E-value=6.1e-05 Score=77.69 Aligned_cols=125 Identities=18% Similarity=0.180 Sum_probs=92.1
Q ss_pred cCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccC-CcCCCCCcccHHHHHHhcCcEEEeC
Q 003313 467 FDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLG-RDKDENEALPVDELIEKADGFTDVF 545 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~ 545 (831)
...+-|+++++++.|+++|++..++|+++...+..+.+..|+.... ..+.+ .... ..+-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F---~~i~g~~~~~----------------~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF---DVIVGGDDVP----------------PPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc---ceEEcCCCCC----------------CCCcC
Confidence 3457799999999999999999999999999999999999986421 11111 1000 11234
Q ss_pred hHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCC---eeEEecC--chHHHhhhcCEEEeCCChhHHHHHH
Q 003313 546 AEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKAD---IGIAVAG--ATEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 546 P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Ad---vgIa~~~--~~~~a~~aadivl~~~~~~~i~~~i 612 (831)
|+.....++.+....+.++||||..+|..|-++|+ ||+..|. ........+|.++ +++..+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHH
Confidence 55566666666655457999999999999999998 6677773 4566677799998 5577666554
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.89 E-value=7.9e-05 Score=83.91 Aligned_cols=140 Identities=20% Similarity=0.174 Sum_probs=89.8
Q ss_pred hHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC----CCc-cccCCc-------------------------
Q 003313 474 SSDTI-HRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY----PSS-LLLGRD------------------------- 522 (831)
Q Consensus 474 ~~~~I-~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~----~~~-~~~~~~------------------------- 522 (831)
..+++ +++++.|+.+++.||+.+.....+.++.++..+.+ .+. +..+..
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~ 112 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETS 112 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHh
Confidence 44455 88999999999999999999999999998765410 000 000000
Q ss_pred -C---------CCC--------Cccc-------HHHHHHh----cC------cEEEeChH--HHHHHHHHHhhc------
Q 003313 523 -K---------DEN--------EALP-------VDELIEK----AD------GFTDVFAE--HKYEIVKILQEK------ 559 (831)
Q Consensus 523 -~---------~~~--------~~~~-------~~~~~~~----~~------v~~~~~P~--~K~~iv~~l~~~------ 559 (831)
. ++. ..+. +.+.+.+ +. -+..+.|. .|..-++.+.++
T Consensus 113 ~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi 192 (413)
T PLN02382 113 KFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGK 192 (413)
T ss_pred cCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCC
Confidence 0 000 0001 1111111 11 12344553 488888777654
Q ss_pred -CCEEEEEcCCccChhhhccCC-eeEEecCchHHHhhhc--------CEEEe-CCChhHHHHHHH
Q 003313 560 -KHVVGMTGDGVNDAPALKKAD-IGIAVAGATEAARGAA--------DIVLT-EPGLSVICSAVL 613 (831)
Q Consensus 560 -g~~v~~iGDG~ND~~al~~Ad-vgIa~~~~~~~a~~aa--------divl~-~~~~~~i~~~i~ 613 (831)
...++++||+.||.+||+.|+ .||+|+|+.+..|+.+ +++.. +++-++|.++++
T Consensus 193 ~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 193 APVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred ChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 247899999999999999999 6999999999988743 55544 345667777664
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.88 E-value=4.4e-05 Score=78.95 Aligned_cols=44 Identities=11% Similarity=0.132 Sum_probs=39.1
Q ss_pred cCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 003313 467 FDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGT 510 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~ 510 (831)
.+..-+++.++|++|+++|++++++||+....+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 45556679999999999999999999999999999999999843
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.83 E-value=9.6e-05 Score=75.31 Aligned_cols=124 Identities=15% Similarity=0.119 Sum_probs=84.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.+++|+++|+++.++||.....+....+..|+.... ..++...+. ...+-.|+-
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~----------------~~~KP~~~~ 136 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF--DHVIGSDEV----------------PRPKPAPDI 136 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe--eeEEecCcC----------------CCCCCChHH
Confidence 67899999999999999999999999999888888889885310 011111000 011112333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe---c--CchHHHhhhcCEEEeCCChhHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV---A--GATEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~---~--~~~~~a~~aadivl~~~~~~~i~~~i 612 (831)
=.++++.++-..+.++|+||+.+|..+-++|++.... | +..+..++.+|+++ +++..+..++
T Consensus 137 ~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 137 VREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 3444555554567799999999999999999986432 3 33345567799987 5566665543
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.77 E-value=5.2e-05 Score=70.93 Aligned_cols=118 Identities=14% Similarity=0.052 Sum_probs=75.4
Q ss_pred cccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEe
Q 003313 465 PLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDV 544 (831)
Q Consensus 465 ~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 544 (831)
.-..++++++.+.+++|++.|++++++||.....+....+.+|+... ...++......................+.+-
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIYYPKEGLFLGGGPFDIGKP 97 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhhcccccccccccccccCCC
Confidence 34558899999999999999999999999999999999999987321 0111110000000000000000000122344
Q ss_pred ChHHHHHHHHHHhhcCCEEEEEcCCccChhhhcc-CCeeEE
Q 003313 545 FAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKK-ADIGIA 584 (831)
Q Consensus 545 ~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~-AdvgIa 584 (831)
.|+.+..+.+.+....+.+.++||+.||+.|++. ..-+|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 98 NPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 5566666777766666789999999999999998 444444
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00011 Score=77.98 Aligned_cols=138 Identities=11% Similarity=0.083 Sum_probs=85.1
Q ss_pred CCCCChHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccc---C----CcCC----------------
Q 003313 469 PPRHDSSDTIHRALK-LGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLL---G----RDKD---------------- 524 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~-~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~---~----~~~~---------------- 524 (831)
.+-+++.++|++|++ .|++++++||++......+.+.+++.-...++..+. + ..++
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 445789999999998 799999999999999988887766421000000000 0 0000
Q ss_pred -------------------CC--CcccHHHHHH----hcC--------cEEEeChH--HHHHHHHHHhhc----CCEEEE
Q 003313 525 -------------------EN--EALPVDELIE----KAD--------GFTDVFAE--HKYEIVKILQEK----KHVVGM 565 (831)
Q Consensus 525 -------------------~~--~~~~~~~~~~----~~~--------v~~~~~P~--~K~~iv~~l~~~----g~~v~~ 565 (831)
.. ..+.+.++.+ ... .+.++.|. +|..-++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 00 0011111111 111 12233343 687777766543 457999
Q ss_pred EcCCccChhhhccC----CeeEEecCchHHHhhhcCEEEeCCChhHHHHHH
Q 003313 566 TGDGVNDAPALKKA----DIGIAVAGATEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 566 iGDG~ND~~al~~A----dvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i 612 (831)
+||+.||.+|++.+ +.||+||++. ..|++.+. +...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLA--GVPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCC--CHHHHHHHH
Confidence 99999999999999 9999999875 45777774 455555544
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00028 Score=72.85 Aligned_cols=38 Identities=18% Similarity=0.219 Sum_probs=35.5
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 003313 472 HDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIG 509 (831)
Q Consensus 472 ~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~ 509 (831)
+.+.++|++++++|++++++||+....+..+.+++|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00038 Score=74.26 Aligned_cols=125 Identities=17% Similarity=0.142 Sum_probs=81.9
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
.++.+++.++++.|++.|+++.++||.+...+..+.++.|+.... ..++.+.+.. ...-.|+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~~----------------~~Kp~p~ 161 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTLP----------------QKKPDPA 161 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCCC----------------CCCCCcH
Confidence 367899999999999999999999999998888888888874311 1111111000 0011122
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCee-EEe--c--CchHHHhhhcCEEEeCCChhHHHHHH
Q 003313 548 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG-IAV--A--GATEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 548 ~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg-Ia~--~--~~~~~a~~aadivl~~~~~~~i~~~i 612 (831)
--..+.+.+.-..+.++++||+.||+.+.+.|++. +++ | ...+..+..+|.++ +++..+..++
T Consensus 162 ~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~ 229 (272)
T PRK13223 162 ALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGC 229 (272)
T ss_pred HHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHH
Confidence 22334444443456799999999999999999973 444 3 22333445789888 4577766543
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00033 Score=71.86 Aligned_cols=124 Identities=17% Similarity=0.108 Sum_probs=83.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|+++|+++.++|+.....+..+.+..|+.... ..++...+.. ..+-.|+-
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~----------------~~Kp~p~~ 143 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DVVITLDDVE----------------HAKPDPEP 143 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eEEEecCcCC----------------CCCCCcHH
Confidence 36799999999999999999999999999999999999985311 1111111000 01122333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeE---EecC--chHHHhhhcCEEEeCCChhHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI---AVAG--ATEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgI---a~~~--~~~~a~~aadivl~~~~~~~i~~~i 612 (831)
-.++++.++.....+++|||+.+|..|-++|++-. .-|. ..+.....+|+++ +++..+...+
T Consensus 144 ~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 144 VLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 34455555545567999999999999999999843 3342 2223345688887 4677776654
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00038 Score=71.23 Aligned_cols=122 Identities=14% Similarity=0.088 Sum_probs=80.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|++.|+++.++|+.+...+..+.+..|+.... ..++.+.+.. ..+-.|+-
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~Kp~p~~ 146 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLIGGDSLA----------------QRKPHPDP 146 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEEecCCCC----------------CCCCChHH
Confidence 57899999999999999999999999999999999999985311 1111111000 01111222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe---cCc--hHHHhhhcCEEEeCCChhHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV---AGA--TEAARGAADIVLTEPGLSVICS 610 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~---~~~--~~~a~~aadivl~~~~~~~i~~ 610 (831)
=.+..+.++...+.++++||+.||+.|.++|++-... |.+ .+.....+|+++ +++..+..
T Consensus 147 ~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 147 LLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred HHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 2334444444456799999999999999999987653 322 223334688887 44655543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0011 Score=69.77 Aligned_cols=43 Identities=7% Similarity=-0.019 Sum_probs=38.7
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGT 510 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~ 510 (831)
+..-+.+.++|++|+++||.++++||........+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3455679999999999999999999999999999999999864
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00078 Score=69.55 Aligned_cols=121 Identities=13% Similarity=0.125 Sum_probs=78.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.++++.|++.|+++.++|+........+.++.|+..-. ..++.+.+.. ..+-.|+-
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~Kp~~~~ 153 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKLP----------------YSKPHPEV 153 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccCC----------------CCCCCHHH
Confidence 57899999999999999999999999999999999999985421 1111111000 11112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEec-C---chHHHhhhcCEEEeCCChhHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-G---ATEAARGAADIVLTEPGLSVIC 609 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~-~---~~~~a~~aadivl~~~~~~~i~ 609 (831)
=....+.+.-..+.++++||..||+.+-++|++....- . +.+.-...+|.++ .++..+.
T Consensus 154 ~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 154 YLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred HHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 22333333333456999999999999999999876552 2 2222233577776 4465554
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0027 Score=66.85 Aligned_cols=127 Identities=13% Similarity=0.109 Sum_probs=83.5
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC----------CCccccCCcCCCCCcccHHHHHHh
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY----------PSSLLLGRDKDENEALPVDELIEK 537 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 537 (831)
-++|||+.+.++.|++.|+++.++||-....+..+.++.|+..... ...++.|..-.
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P------------- 186 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGP------------- 186 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCC-------------
Confidence 4689999999999999999999999999999999999999853210 11122221100
Q ss_pred cCcEEEeChHHHHHHHH-----HHh--hcCCEEEEEcCCccChhhhccC---CeeEEec--Cc-----hHHHhhhcCEEE
Q 003313 538 ADGFTDVFAEHKYEIVK-----ILQ--EKKHVVGMTGDGVNDAPALKKA---DIGIAVA--GA-----TEAARGAADIVL 600 (831)
Q Consensus 538 ~~v~~~~~P~~K~~iv~-----~l~--~~g~~v~~iGDG~ND~~al~~A---dvgIa~~--~~-----~~~a~~aadivl 600 (831)
-+....|.+.+. .++ .....|.++|||.||+.|..-. .--+.+| +. -+.=+++=|||+
T Consensus 187 -----~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl 261 (277)
T TIGR01544 187 -----LIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVL 261 (277)
T ss_pred -----cccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEE
Confidence 000123444332 222 2345789999999999996543 2334444 22 233456789999
Q ss_pred eCCChhHHHHHH
Q 003313 601 TEPGLSVICSAV 612 (831)
Q Consensus 601 ~~~~~~~i~~~i 612 (831)
.+|.--.++.+|
T Consensus 262 ~~D~t~~v~~~i 273 (277)
T TIGR01544 262 VQDETLEVANSI 273 (277)
T ss_pred ECCCCchHHHHH
Confidence 998766666655
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.00087 Score=68.45 Aligned_cols=107 Identities=10% Similarity=-0.004 Sum_probs=75.2
Q ss_pred CCCCChHHHHH-HHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 469 PPRHDSSDTIH-RALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 469 ~lr~~~~~~I~-~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
.++|++.+.|+ .+++.|++++++|+-....+..+|+..|+... .+++ +.+++......+ .-..|..+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~---~~~i-~t~le~~~gg~~--------~g~~c~g~ 161 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR---LNLI-ASQIERGNGGWV--------LPLRCLGH 161 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc---CcEE-EEEeEEeCCceE--------cCccCCCh
Confidence 46899999996 78989999999999999999999998665321 1111 222221000000 12346778
Q ss_pred HHHHHHHHH-hhcCCEEEEEcCCccChhhhccCCeeEEecC
Q 003313 548 HKYEIVKIL-QEKKHVVGMTGDGVNDAPALKKADIGIAVAG 587 (831)
Q Consensus 548 ~K~~iv~~l-~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~ 587 (831)
+|.+-++.. ........+-||+.||.|||+.||.+++++.
T Consensus 162 ~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 162 EKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred HHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 898877644 3333456688999999999999999999974
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0023 Score=65.51 Aligned_cols=109 Identities=11% Similarity=-0.021 Sum_probs=76.0
Q ss_pred CCCCChHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 469 PPRHDSSDTI-HRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 469 ~lr~~~~~~I-~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
.++|++.+.| +.+++.|++++++|+-....+..+++.+|+... .. +.+.+++. .... + -.-..|..+
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~---~~-~i~t~l~~----~~tg---~-~~g~~c~g~ 162 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR---VN-LIASQMQR----RYGG---W-VLTLRCLGH 162 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc---Cc-eEEEEEEE----EEcc---E-ECCccCCCh
Confidence 4589999999 578889999999999999999999999995210 01 11222110 0000 0 001246678
Q ss_pred HHHHHHHHH-hhcCCEEEEEcCCccChhhhccCCeeEEecCch
Q 003313 548 HKYEIVKIL-QEKKHVVGMTGDGVNDAPALKKADIGIAVAGAT 589 (831)
Q Consensus 548 ~K~~iv~~l-~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~ 589 (831)
+|.+-++.. ........+-||+.||.|||+.|+.+++++...
T Consensus 163 ~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~~ 205 (211)
T PRK11590 163 EKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPRG 205 (211)
T ss_pred HHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECccH
Confidence 898877654 434455678899999999999999999997443
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.002 Score=66.31 Aligned_cols=124 Identities=17% Similarity=0.145 Sum_probs=79.7
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC-CCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeCh
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGT-NMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFA 546 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P 546 (831)
.++.+|+.+.+++|++.|+++.++|+-....+..+.+.+|+.. +.. ..++...+.. ..+-.|
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f-~~i~~~~~~~----------------~~KP~p 148 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV-DAVVCPSDVA----------------AGRPAP 148 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC-CEEEcCCcCC----------------CCCCCH
Confidence 3688999999999999999999999999999999999999851 111 1122111110 011122
Q ss_pred HHHHHHHHHHhhc-CCEEEEEcCCccChhhhccCCeeEE--ecCc---h-HHHhhhcCEEEeCCChhHHHH
Q 003313 547 EHKYEIVKILQEK-KHVVGMTGDGVNDAPALKKADIGIA--VAGA---T-EAARGAADIVLTEPGLSVICS 610 (831)
Q Consensus 547 ~~K~~iv~~l~~~-g~~v~~iGDG~ND~~al~~AdvgIa--~~~~---~-~~a~~aadivl~~~~~~~i~~ 610 (831)
+-=....+.+.-. ...++|+||+.+|+.+-++|++..+ +..| . +.....+|.++ +++..+..
T Consensus 149 ~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 149 DLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred HHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 2222333333333 3579999999999999999999863 3222 1 22234577776 44655544
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0011 Score=77.21 Aligned_cols=40 Identities=10% Similarity=0.078 Sum_probs=36.3
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIG 509 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~ 509 (831)
.-+.+.++|++++++|+.++++||+....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3457899999999999999999999999999999999974
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0018 Score=67.28 Aligned_cols=124 Identities=12% Similarity=0.046 Sum_probs=82.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|++.|+++.++|+.+...+..+-+..|+.... ..++.+.+.. ..+-.|+-
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~----------------~~KP~p~~ 156 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC--AVLIGGDTLA----------------ERKPHPLP 156 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc--cEEEecCcCC----------------CCCCCHHH
Confidence 57899999999999999999999999988888888888875311 1111111000 11222333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEE-e--cCc--h-HHHhhhcCEEEeCCChhHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA-V--AGA--T-EAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa-~--~~~--~-~~a~~aadivl~~~~~~~i~~~i 612 (831)
=...++.+.-..+.++||||+.||..|-+.|++... + |.. . ......+|+++ +++..+.+.+
T Consensus 157 ~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~ 224 (229)
T PRK13226 157 LLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPA 224 (229)
T ss_pred HHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHh
Confidence 345555565556779999999999999999988743 2 321 1 12234689988 5566665544
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0042 Score=66.17 Aligned_cols=121 Identities=13% Similarity=0.102 Sum_probs=80.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|++.|+++.++|+.+...+..+-+.+|+.... + .++.+.+. . ..|+-
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F-~-~vi~~~~~-----------------~--~k~~~ 200 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-S-VVQAGTPI-----------------L--SKRRA 200 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe-E-EEEecCCC-----------------C--CCHHH
Confidence 46799999999999999999999999999999999999985321 1 11111100 0 01211
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe---cCch--HHHhhhcCEEEeCCChhHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV---AGAT--EAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~---~~~~--~~a~~aadivl~~~~~~~i~~~i 612 (831)
=..+++.++-..+.++||||+.+|+.+-++|++-... |..+ +.....+|+++ +++..+...+
T Consensus 201 ~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 201 LSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 1222333333445799999999999999999986542 3222 23344689887 5677776654
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0058 Score=60.48 Aligned_cols=143 Identities=17% Similarity=0.168 Sum_probs=92.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHH------------
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIE------------ 536 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 536 (831)
++-|++.++++.|++. ...+++|---.+-+.++|..+|++........+.-++... ..++..+++.
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~-PeeeR~E~L~~~~~~~~~~gee 160 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAV-PEEEREELLSIIDVIASLSGEE 160 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccC-ChHHHHHHHHhcCccccccHHH
Confidence 3568999999999876 4566666667788899999999964322211111110000 1111112211
Q ss_pred ---hc-CcEEEeChHH---------------HHHHHHHHhhc---CCEEEEEcCCccChhhhccCC-e-eEEec-CchHH
Q 003313 537 ---KA-DGFTDVFAEH---------------KYEIVKILQEK---KHVVGMTGDGVNDAPALKKAD-I-GIAVA-GATEA 591 (831)
Q Consensus 537 ---~~-~v~~~~~P~~---------------K~~iv~~l~~~---g~~v~~iGDG~ND~~al~~Ad-v-gIa~~-~~~~~ 591 (831)
+. .+|.|..|.+ |+++++.+-+. ....+++||++.|+.||+.+. - |+|+. ||.+-
T Consensus 161 lfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeY 240 (315)
T COG4030 161 LFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEY 240 (315)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcc
Confidence 11 2577887765 44555544442 345789999999999999873 3 37776 78888
Q ss_pred HhhhcCEEEeCCChhHHHHHHH
Q 003313 592 ARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 592 a~~aadivl~~~~~~~i~~~i~ 613 (831)
|..-||+.+.+++..+....|+
T Consensus 241 al~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 241 ALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccccceEEeccchhhhhHHHH
Confidence 8889999999999888777764
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0024 Score=77.72 Aligned_cols=169 Identities=18% Similarity=0.154 Sum_probs=101.2
Q ss_pred HHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccc--cCCCCCChHHHHHHHHh-CCCeEEEEcCCCHHHHHH
Q 003313 425 HEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPL--FDPPRHDSSDTIHRALK-LGVCVKMITGDHLAIAKE 501 (831)
Q Consensus 425 ~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~--~D~lr~~~~~~I~~l~~-~Gi~v~m~TGD~~~~a~~ 501 (831)
+.....|.+.-.|.+++-+++ |++....- ...+.+++.+++++|.+ .|+.|+++||+.......
T Consensus 481 ~~~~~~y~~~~~rLi~~D~DG-------------TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~ 547 (726)
T PRK14501 481 EEIIARYRAASRRLLLLDYDG-------------TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLER 547 (726)
T ss_pred HHHHHHHHhccceEEEEecCc-------------cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHH
Confidence 444556666667888887766 55443211 12356789999999999 599999999999998877
Q ss_pred HHHHhCCCCCCCCCcccc--CCcC------C------------------------C----------CCcc--------cH
Q 003313 502 TGRRLGIGTNMYPSSLLL--GRDK------D------------------------E----------NEAL--------PV 531 (831)
Q Consensus 502 ia~~~gi~~~~~~~~~~~--~~~~------~------------------------~----------~~~~--------~~ 531 (831)
.....++.--..++..+. +.+. + . ..+. ++
T Consensus 548 ~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l 627 (726)
T PRK14501 548 WFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANEL 627 (726)
T ss_pred HhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHH
Confidence 765555310000000000 0000 0 0 0000 01
Q ss_pred HHHHHh----cC-------cEEEeCh--HHHHHHHHHHhhc--CCEEEEEcCCccChhhhccC---CeeEEecCchHHHh
Q 003313 532 DELIEK----AD-------GFTDVFA--EHKYEIVKILQEK--KHVVGMTGDGVNDAPALKKA---DIGIAVAGATEAAR 593 (831)
Q Consensus 532 ~~~~~~----~~-------v~~~~~P--~~K~~iv~~l~~~--g~~v~~iGDG~ND~~al~~A---dvgIa~~~~~~~a~ 593 (831)
.+.+.. .. -+..+.| -+|...++.+.+. ...++++||+.||.+|++.+ ..+|+||++ +
T Consensus 628 ~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~ 703 (726)
T PRK14501 628 ILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----E 703 (726)
T ss_pred HHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----C
Confidence 111111 00 1123334 3688888888763 35899999999999999986 688888874 4
Q ss_pred hhcCEEEeCCChhHHHHHH
Q 003313 594 GAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 594 ~aadivl~~~~~~~i~~~i 612 (831)
.+|++.+.+. ..+...+
T Consensus 704 s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 704 SRARYRLPSQ--REVRELL 720 (726)
T ss_pred CcceEeCCCH--HHHHHHH
Confidence 6788888653 4455544
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.004 Score=66.26 Aligned_cols=96 Identities=11% Similarity=-0.020 Sum_probs=63.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.++++.|++.|+++.++||.....+..+-+..|+.... ...++...+.. ..+-.|+-
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~-~d~i~~~~~~~----------------~~KP~p~~ 163 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYR-PDHVVTTDDVP----------------AGRPYPWM 163 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCC-ceEEEcCCcCC----------------CCCCChHH
Confidence 46789999999999999999999999998888877777764311 11111111100 01112222
Q ss_pred HHHHHHHHhhc-CCEEEEEcCCccChhhhccCCe
Q 003313 549 KYEIVKILQEK-KHVVGMTGDGVNDAPALKKADI 581 (831)
Q Consensus 549 K~~iv~~l~~~-g~~v~~iGDG~ND~~al~~Adv 581 (831)
=....+.+.-. ...++||||+.+|+.+-+.|++
T Consensus 164 ~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 164 ALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred HHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 22333333322 2569999999999999999997
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0031 Score=66.14 Aligned_cols=67 Identities=24% Similarity=0.254 Sum_probs=45.8
Q ss_pred HHHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHH-----Hhhh---cCE-EEeCCChhHHHHHHH
Q 003313 547 EHKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEA-----ARGA---ADI-VLTEPGLSVICSAVL 613 (831)
Q Consensus 547 ~~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~-----a~~a---adi-vl~~~~~~~i~~~i~ 613 (831)
..|..-++.++++ .+.|.++||+.||.+||..++-||.++|+.+. .... ..+ .-..+.-.+|.++++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 3699999888875 24678899999999999999999999988877 2222 233 334445567777764
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0049 Score=64.98 Aligned_cols=98 Identities=13% Similarity=0.003 Sum_probs=66.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|+++|+++.++||.....+..+-+.+|+.... ...++.+.+.. ..+-.|+-
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f-~d~ii~~~~~~----------------~~KP~p~~ 161 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR-PDYNVTTDDVP----------------AGRPAPWM 161 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC-CceEEccccCC----------------CCCCCHHH
Confidence 46789999999999999999999999999999988888875421 11122111110 11112222
Q ss_pred HHHHHHHHhhc-CCEEEEEcCCccChhhhccCCeeE
Q 003313 549 KYEIVKILQEK-KHVVGMTGDGVNDAPALKKADIGI 583 (831)
Q Consensus 549 K~~iv~~l~~~-g~~v~~iGDG~ND~~al~~AdvgI 583 (831)
=....+.+.-. .+.++||||..+|+.+-+.|++-.
T Consensus 162 ~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~ 197 (253)
T TIGR01422 162 ALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWT 197 (253)
T ss_pred HHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeE
Confidence 23333444332 456999999999999999999653
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0043 Score=65.62 Aligned_cols=120 Identities=14% Similarity=0.022 Sum_probs=78.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.|++.|+++.++|+.....+..+-+.+|+..- -..++.+.+.. ...-.|+-
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~ii~~~d~~----------------~~KP~Pe~ 170 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF--FSVVLAAEDVY----------------RGKPDPEM 170 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh--CcEEEecccCC----------------CCCCCHHH
Confidence 4689999999999999999999999999999999999998531 11122221111 01112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeE-Ee-cCchHHHhhhcCEEEeCCChhHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI-AV-AGATEAARGAADIVLTEPGLSVI 608 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgI-a~-~~~~~~a~~aadivl~~~~~~~i 608 (831)
=...++.++-....++||||..+|+.|-++|++-. ++ |..+......+|+++ +++..+
T Consensus 171 ~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el 230 (260)
T PLN03243 171 FMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDL 230 (260)
T ss_pred HHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHH
Confidence 23444445545567999999999999999999844 33 322222233578876 345544
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0025 Score=64.73 Aligned_cols=39 Identities=28% Similarity=0.344 Sum_probs=35.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLG 507 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~g 507 (831)
++.+++.+++++|++.|++++++||+....+..+.++++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 467899999999999999999999999999999988754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0069 Score=63.68 Aligned_cols=116 Identities=11% Similarity=0.105 Sum_probs=78.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|++.|+++.++|+-....+...-+.+|+.... ..++.+.+.. ...-.|+-
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~----------------~~KP~p~~ 169 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE----------------HAKPHPDP 169 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC----------------CCCCChHH
Confidence 46789999999999999999999999999999999999985311 1122221111 11122333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe---cCc-hHHHhhhcCEEEeC
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV---AGA-TEAARGAADIVLTE 602 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~---~~~-~~~a~~aadivl~~ 602 (831)
-....+.++-..+.++|+||..+|+.|-++|++-... |.. .+.....+|+++.+
T Consensus 170 ~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 170 YLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 3444555554556799999999999999999886432 321 22233468888754
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0022 Score=64.84 Aligned_cols=94 Identities=17% Similarity=0.059 Sum_probs=66.7
Q ss_pred cCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeCh
Q 003313 467 FDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFA 546 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P 546 (831)
.+++.+++.++++.|++.|+++.++||.....+..+.+.+|+..-. ..++...+ +..+-.|
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~~-----------------~~~KP~p 164 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWMED-----------------CPPKPNP 164 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeecC-----------------CCCCcCH
Confidence 3456778899999999999999999999999999999999985311 11111111 1112334
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCccChhhhccC
Q 003313 547 EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKA 579 (831)
Q Consensus 547 ~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~A 579 (831)
+--...++.++-..+.++||||+.+|+.|-++|
T Consensus 165 ~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 165 EPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 444555666665667899999999999886654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0023 Score=61.37 Aligned_cols=112 Identities=13% Similarity=0.070 Sum_probs=72.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
.++|+-++.++.+++.+++++++|+-.......+-+.++=........++..+..-..+.. -.+... ....-..+
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~--h~i~~~---~ds~fG~d 147 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQ--HSIKYT---DDSQFGHD 147 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCc--eeeecC---CccccCCC
Confidence 4789999999999999999999999887777777666651111111111111100000000 000000 01122357
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV 585 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~ 585 (831)
|...|+.+++..+.+.++|||+.|.+|-+.+|+=.|=
T Consensus 148 K~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 148 KSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred cchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 9999999999999999999999999998888776653
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0075 Score=59.60 Aligned_cols=99 Identities=8% Similarity=-0.059 Sum_probs=59.7
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHH--------HHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcE
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLA--------IAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGF 541 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~--------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 541 (831)
+.|++.+++++|++.|+++.++|+.... ......+..|+..-.. .....+.+. -.
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~~~~~~~~----------------~~ 91 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYL-CPHKHGDGC----------------EC 91 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEE-CcCCCCCCC----------------CC
Confidence 6799999999999999999999987631 1223334455532100 000000000 01
Q ss_pred EEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe
Q 003313 542 TDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV 585 (831)
Q Consensus 542 ~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~ 585 (831)
.+-.|+-=.+.++.+....+.+.||||..+|+.+-++|++-...
T Consensus 92 ~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~ 135 (173)
T PRK06769 92 RKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTIL 135 (173)
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 11222222444555544456799999999999999999886554
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0099 Score=61.12 Aligned_cols=114 Identities=14% Similarity=0.121 Sum_probs=72.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|+++|+++.++|+.....+...-+..|+.. ...++.+.+.. ...-.|+-
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~---~~~i~~~~~~~----------------~~KP~p~~ 143 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA---PEVFVTAERVK----------------RGKPEPDA 143 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC---ccEEEEHHHhc----------------CCCCCcHH
Confidence 478999999999999999999999988776666666677631 11111111000 11122333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCee-EEecCch-HHHhhhcCEEEe
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG-IAVAGAT-EAARGAADIVLT 601 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg-Ia~~~~~-~~a~~aadivl~ 601 (831)
=....+.+.-..+.++||||..+|+.+-+.|++- |++..+. ......+|+++.
T Consensus 144 ~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 144 YLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred HHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 3344444544567899999999999999999984 5554332 222345777763
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0091 Score=61.40 Aligned_cols=98 Identities=18% Similarity=0.149 Sum_probs=66.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeCh--
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFA-- 546 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P-- 546 (831)
++.|++.++++.|++.|+++.++|+-+...+....+.+|+.... ..++.+.+ ..+..|
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~------------------~~~~KP~~ 153 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEE------------------EGVEKPHP 153 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEecc------------------CCCCCCCH
Confidence 47899999999999999999999999888888888888874311 11111111 111122
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCc-cChhhhccCCee-EEec
Q 003313 547 EHKYEIVKILQEKKHVVGMTGDGV-NDAPALKKADIG-IAVA 586 (831)
Q Consensus 547 ~~K~~iv~~l~~~g~~v~~iGDG~-ND~~al~~Advg-Ia~~ 586 (831)
+-=....+.+.-....++++||.. +|+.+-++|++- |.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 154 KIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 222333344443456799999998 999999999874 4444
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0088 Score=68.90 Aligned_cols=123 Identities=12% Similarity=0.063 Sum_probs=80.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+.. ..-.|+-
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v~-----------------~~~kP~~ 390 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQIN-----------------SLNKSDL 390 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCCC-----------------CCCCcHH
Confidence 67899999999999999999999999999999999999985311 1122111110 0112221
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCee-EEec--CchHHHhhhcCEEEeCCChhHHHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG-IAVA--GATEAARGAADIVLTEPGLSVICSAVLT 614 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg-Ia~~--~~~~~a~~aadivl~~~~~~~i~~~i~~ 614 (831)
=....+.+ ..+.+.++||+.+|+.+-+.|++- |++. .+.+.....+|+++ +++..+...+..
T Consensus 391 ~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 391 VKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 12222222 235699999999999999999974 3442 22222234588887 557777666543
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0052 Score=63.58 Aligned_cols=90 Identities=21% Similarity=0.233 Sum_probs=62.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCC----HHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEe
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDH----LAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDV 544 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 544 (831)
.+.+++++.++.+++.|+++.++||+. ..++..+.+..|++.......++.+...
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 366789999999999999999999964 5688899988999422111111211100
Q ss_pred ChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeE
Q 003313 545 FAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI 583 (831)
Q Consensus 545 ~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgI 583 (831)
.-.+|... +++.+ .++|+||..+|..+-++|++-.
T Consensus 173 ~K~~K~~~---l~~~~-i~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 173 GQYTKTQW---LKKKN-IRIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred CCCCHHHH---HHhcC-CeEEEcCCHHHHHHHHHcCCcE
Confidence 01234443 33444 4889999999999999998753
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0097 Score=63.93 Aligned_cols=117 Identities=16% Similarity=0.082 Sum_probs=71.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|++.|+++.++|+-+......+-+..+...-......+.+.+.. ..+-.|+-
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~----------------~~KP~p~~ 207 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP----------------KKKPDPDI 207 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC----------------CCCCCHHH
Confidence 57899999999999999999999998887777665554321100000111111000 01112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEec-Cc--hHHHhhhcCEEEe
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-GA--TEAARGAADIVLT 601 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~-~~--~~~a~~aadivl~ 601 (831)
=..+.+.+.-....++||||+.+|+.|-++|++....- .| +......+|+++.
T Consensus 208 ~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 208 YNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred HHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 23444555445567999999999999999999876542 22 2111235788873
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.03 Score=61.81 Aligned_cols=68 Identities=24% Similarity=0.206 Sum_probs=48.7
Q ss_pred EEEeChH---HHHHHHHHHhhc-C-----C-EEEEEcCCccChhhhcc-----CCeeEEecCchHHHhhhcCEEEeCCCh
Q 003313 541 FTDVFAE---HKYEIVKILQEK-K-----H-VVGMTGDGVNDAPALKK-----ADIGIAVAGATEAARGAADIVLTEPGL 605 (831)
Q Consensus 541 ~~~~~P~---~K~~iv~~l~~~-g-----~-~v~~iGDG~ND~~al~~-----AdvgIa~~~~~~~a~~aadivl~~~~~ 605 (831)
+.++.|. +|..-++.+.+. | . .++++||+.||..||+. +++||+|++|.+.. .|++.+. +.
T Consensus 291 vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L~--dp 366 (384)
T PLN02580 291 VLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSLR--DP 366 (384)
T ss_pred EEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEcC--CH
Confidence 3455663 788888777653 2 1 25899999999999995 69999999766433 5788874 46
Q ss_pred hHHHHHH
Q 003313 606 SVICSAV 612 (831)
Q Consensus 606 ~~i~~~i 612 (831)
..+...+
T Consensus 367 ~eV~~~L 373 (384)
T PLN02580 367 SEVMEFL 373 (384)
T ss_pred HHHHHHH
Confidence 6666555
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.0045 Score=64.14 Aligned_cols=88 Identities=22% Similarity=0.262 Sum_probs=60.4
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeC
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGD----HLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVF 545 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD----~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 545 (831)
+.+++.+.++.++++|+++.++|+. ...++..+.+.+|+.... ..+.+.+... .-.
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f---~~i~~~d~~~-----------------~~K 174 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN---PVIFAGDKPG-----------------QYQ 174 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe---eEEECCCCCC-----------------CCC
Confidence 4445999999999999999999998 667899999999996311 1221111100 001
Q ss_pred hHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCee
Q 003313 546 AEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 582 (831)
Q Consensus 546 P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg 582 (831)
| +|. ..+++.+ .++|+||..||..+-++|++-
T Consensus 175 p-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 175 Y-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred C-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 1 232 2344444 478999999999999988764
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.028 Score=55.92 Aligned_cols=128 Identities=20% Similarity=0.091 Sum_probs=71.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHL---------------AIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDE 533 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (831)
.+.||+.+++++|++.|+++.++|..+. .....+-+..|+.. ..++....... +.
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f----~~i~~~~~~~~---~~--- 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRL----DGIYYCPHHPE---DG--- 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCcc----ceEEECCCCCC---CC---
Confidence 3679999999999999999999998762 11122233445421 01110000000 00
Q ss_pred HHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEE-ecCch--H-HHhhhc--CEEEeCCChhH
Q 003313 534 LIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA-VAGAT--E-AARGAA--DIVLTEPGLSV 607 (831)
Q Consensus 534 ~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa-~~~~~--~-~a~~aa--divl~~~~~~~ 607 (831)
.-..+-.|+--...++.+.-..+.++||||+.+|+.+-++|++..- +..|. . .....+ |.++ +++..
T Consensus 99 -----~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~e 171 (181)
T PRK08942 99 -----CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLAD 171 (181)
T ss_pred -----CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHHH
Confidence 0011222333344555555556789999999999999999997432 22222 1 112234 7776 45666
Q ss_pred HHHHHH
Q 003313 608 ICSAVL 613 (831)
Q Consensus 608 i~~~i~ 613 (831)
+.+.+.
T Consensus 172 l~~~l~ 177 (181)
T PRK08942 172 LPQALK 177 (181)
T ss_pred HHHHHH
Confidence 665543
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.012 Score=63.71 Aligned_cols=109 Identities=14% Similarity=0.011 Sum_probs=76.0
Q ss_pred ccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeC
Q 003313 466 LFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVF 545 (831)
Q Consensus 466 ~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 545 (831)
..+++.+++.++++.|++.|++++++||.....+..+.+.+|+.....+ .+.+.+. ....+.... -.+-.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~--~i~~~~~-------~~~~~~~~~-~~kp~ 253 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD--DLIGRPP-------DMHFQREQG-DKRPD 253 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh--hhhCCcc-------hhhhcccCC-CCCCc
Confidence 5678999999999999999999999999999999999999988531111 1111110 000000000 11334
Q ss_pred hHHHHHHHHHHhh-cCCEEEEEcCCccChhhhccCCeeEE
Q 003313 546 AEHKYEIVKILQE-KKHVVGMTGDGVNDAPALKKADIGIA 584 (831)
Q Consensus 546 P~~K~~iv~~l~~-~g~~v~~iGDG~ND~~al~~AdvgIa 584 (831)
|+-+...++.+.. ....++|+||..+|+.+-+.|++-..
T Consensus 254 p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 254 DVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred HHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 5667777766544 34789999999999999999998743
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.014 Score=58.93 Aligned_cols=96 Identities=15% Similarity=0.126 Sum_probs=66.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH-
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE- 547 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~- 547 (831)
++.|++.+++++|++.|+++.++|+-+........+.+|+.... ..++...+ .....|.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f--d~i~~s~~------------------~~~~KP~~ 151 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF--DAVLSADA------------------VRAYKPAP 151 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh--heeEehhh------------------cCCCCCCH
Confidence 47799999999999999999999999988888888889974211 11111110 0111222
Q ss_pred -HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEE
Q 003313 548 -HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA 584 (831)
Q Consensus 548 -~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa 584 (831)
-=....+.+.-..+.++++||+.+|+.+-++|++-..
T Consensus 152 ~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i 189 (198)
T TIGR01428 152 QVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTA 189 (198)
T ss_pred HHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEE
Confidence 1133444444445679999999999999998887543
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.028 Score=52.64 Aligned_cols=93 Identities=15% Similarity=0.117 Sum_probs=63.8
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCC--------HHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcC
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDH--------LAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKAD 539 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~--------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (831)
-++.+++.++++.|+++|+++.++|+.. ......+.+.+|+.... ....+ .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-~----------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-H----------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC-C-----------------
Confidence 3578999999999999999999999998 77778888888874210 00000 0
Q ss_pred cEEEeChHHHHHHHHHHh-hcCCEEEEEcC-CccChhhhccCCee
Q 003313 540 GFTDVFAEHKYEIVKILQ-EKKHVVGMTGD-GVNDAPALKKADIG 582 (831)
Q Consensus 540 v~~~~~P~~K~~iv~~l~-~~g~~v~~iGD-G~ND~~al~~Advg 582 (831)
..+-.|+-=..+++.++ -..+.++|+|| ..+|+.+-+.|++-
T Consensus 83 -~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 83 -CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred -CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 00112222234455552 45567999999 59999999888764
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.015 Score=60.17 Aligned_cols=101 Identities=13% Similarity=0.021 Sum_probs=66.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|+++|+++.++|+-+...+...-+..|+..- . ..++.+.+.. ...-.|+-
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~-f-d~iv~s~~~~----------------~~KP~p~~ 154 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAH-L-DLLLSTHTFG----------------YPKEDQRL 154 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHH-C-CEEEEeeeCC----------------CCCCCHHH
Confidence 5789999999999999999999999888888877777887421 1 1111111100 00111221
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCee--EEecC
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG--IAVAG 587 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg--Ia~~~ 587 (831)
=....+.+.-..+.++|+||..+|+.+-++|++. +++.+
T Consensus 155 ~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 155 WQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 1233344444456799999999999999999996 34443
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.034 Score=61.47 Aligned_cols=120 Identities=15% Similarity=0.110 Sum_probs=79.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+|+.+.++.|+++|+++.++|+.....+..+-+..||..-. ..++.+.+.. ...-.|+-
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv~sddv~----------------~~KP~Pei 277 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIVAAEDVY----------------RGKPDPEM 277 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEEecCcCC----------------CCCCCHHH
Confidence 46799999999999999999999999999999999999985310 1111111100 01112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe-cCchHHH-hhhcCEEEeCCChhHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV-AGATEAA-RGAADIVLTEPGLSVI 608 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~-~~~~~~a-~~aadivl~~~~~~~i 608 (831)
=...++.++-....++|+||..+|+.|-+.|++-... .++.+.. ...||+++ +++..+
T Consensus 278 fl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 278 FIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred HHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 2344555555567899999999999999999986443 2322222 23578876 445544
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.033 Score=54.05 Aligned_cols=104 Identities=12% Similarity=0.114 Sum_probs=65.4
Q ss_pred cCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHHh---C--CCCCCCCCccccCCcCCCCCcccHHHHHHhc
Q 003313 467 FDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAK---ETGRRL---G--IGTNMYPSSLLLGRDKDENEALPVDELIEKA 538 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~---~ia~~~---g--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (831)
+|.+.+++.+++++++++|++++.+||+....+. ...+++ | ++. ..++.... ..... ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~~~g------~~~~~-~~~- 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLLSPD------RLFAA-LHR- 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEEcCC------cchhh-hhc-
Confidence 4678899999999999999999999999988774 444442 2 321 01110000 00000 000
Q ss_pred CcEEEeChHHHHHHHHHHhh-----cCCEEEEEcCCccChhhhccCCee
Q 003313 539 DGFTDVFAEHKYEIVKILQE-----KKHVVGMTGDGVNDAPALKKADIG 582 (831)
Q Consensus 539 ~v~~~~~P~~K~~iv~~l~~-----~g~~v~~iGDG~ND~~al~~Advg 582 (831)
.+..+-.-+.|...++.+++ ....++.+||+.+|+.+.+++++-
T Consensus 93 e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 EVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 11222222348777777776 346778899999999999887764
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.023 Score=58.35 Aligned_cols=121 Identities=11% Similarity=0.048 Sum_probs=74.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.+++|++. +++.++|+-....+..+.+++|+..-. ..++...+.. ..+-.|+-
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~----------------~~KP~~~~ 157 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDAG----------------IQKPDKEI 157 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCccC----------------CCCCCHHH
Confidence 5789999999999999 999999999888888888888885311 1111111100 01111221
Q ss_pred HHHHHHHH-hhcCCEEEEEcCCc-cChhhhccCCee-EEe--cCchHHHhhhcCEEEeCCChhHHHH
Q 003313 549 KYEIVKIL-QEKKHVVGMTGDGV-NDAPALKKADIG-IAV--AGATEAARGAADIVLTEPGLSVICS 610 (831)
Q Consensus 549 K~~iv~~l-~~~g~~v~~iGDG~-ND~~al~~Advg-Ia~--~~~~~~a~~aadivl~~~~~~~i~~ 610 (831)
=...++.+ .-..+.+++|||+. +|+.+-+.+++- |.. +..++.....+|.++ +++..+..
T Consensus 158 ~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 158 FNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 23344444 33345699999998 899999999973 333 222222223466666 44555543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.0073 Score=59.00 Aligned_cols=96 Identities=16% Similarity=0.167 Sum_probs=67.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.+++|++.|++++++|+.+........+++|+... ...++...+.. ...-.|+-
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~~----------------~~Kp~~~~ 138 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDVG----------------SRKPDPDA 138 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGSS----------------SSTTSHHH
T ss_pred chhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchhh----------------hhhhHHHH
Confidence 5778999999999999999999999999999999999998521 11222111111 00111222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCee
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 582 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg 582 (831)
=..+++.+.-..+.+.+|||+.+|+.+-+.|++-
T Consensus 139 ~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 139 YRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 2345555555567899999999999999988864
|
... |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.0066 Score=63.77 Aligned_cols=58 Identities=24% Similarity=0.334 Sum_probs=48.3
Q ss_pred EeCh--HHHHHHHHHHhhcCCEEEEEcC----CccChhhhccC-CeeEEecCchHHHhhhcCEEE
Q 003313 543 DVFA--EHKYEIVKILQEKKHVVGMTGD----GVNDAPALKKA-DIGIAVAGATEAARGAADIVL 600 (831)
Q Consensus 543 ~~~P--~~K~~iv~~l~~~g~~v~~iGD----G~ND~~al~~A-dvgIa~~~~~~~a~~aadivl 600 (831)
++.| .+|..-++.+.+..+.|+++|| |.||.+||+.| -.|++++++.+..|..+.+++
T Consensus 181 eI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred EeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 4444 4799999999887889999999 99999999977 688888899999998776543
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.013 Score=58.29 Aligned_cols=94 Identities=11% Similarity=-0.023 Sum_probs=59.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.++++.|+++|+++.++|+... +....+.+|+.... ..++.+.+.. ..+-.|+-
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~kp~p~~ 146 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEIK----------------KGKPDPEI 146 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhcC----------------CCCCChHH
Confidence 5779999999999999999999997532 35567777874211 1111111000 11112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCee
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 582 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg 582 (831)
=....+.+.-..+.+.||||..+|+.+-+.|++-
T Consensus 147 ~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 147 FLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 2233333333345699999999999999999875
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.031 Score=55.28 Aligned_cols=94 Identities=14% Similarity=0.060 Sum_probs=62.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.+++|++.|+++.++|+-.... ..+..++|+.... ..++.+.+.. ...-.|+-
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f--~~i~~~~~~~----------------~~KP~~~~ 145 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF--DVVIFSGDVG----------------RGKPDPDI 145 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC--CEEEEcCCCC----------------CCCCCHHH
Confidence 578999999999999999999999988777 5555558874310 1111111100 11112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCe
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADI 581 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Adv 581 (831)
=..+.+.+......+.++||...|+.+-+++++
T Consensus 146 ~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 146 YLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 334445554456789999999999999888887
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.017 Score=57.45 Aligned_cols=92 Identities=12% Similarity=0.096 Sum_probs=60.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH-
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE- 547 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~- 547 (831)
++.|++.++++.|++.|+++.++|+. ..+..+-+.+|+..-. ..++...+ ..+..|.
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~------------------~~~~kp~~ 145 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADE------------------VKEGKPHP 145 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhh------------------CCCCCCCh
Confidence 57899999999999999999999987 5567777788874210 11111100 0011221
Q ss_pred -HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCee
Q 003313 548 -HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 582 (831)
Q Consensus 548 -~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg 582 (831)
-=....+.+....+.+.+|||+.+|+.+-++|++.
T Consensus 146 ~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 146 ETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 11223333333446689999999999999998875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.039 Score=61.80 Aligned_cols=114 Identities=15% Similarity=0.081 Sum_probs=71.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH-HhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGR-RLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
++.|++.+.++.|++.|+++.++|+.....+....+ ..|+.... ..++.+.+.. ...-.|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v~----------------~~KP~p~ 154 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEVE----------------KGKPSPD 154 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhcC----------------CCCCCHH
Confidence 467999999999999999999999998887776654 56763210 1111111000 1111222
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe-cCc--hHHHhhhcCEEE
Q 003313 548 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV-AGA--TEAARGAADIVL 600 (831)
Q Consensus 548 ~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~-~~~--~~~a~~aadivl 600 (831)
-=...++.+.-..+.++|+||+.+|+.+-++|++.... ..+ .+.....+|.++
T Consensus 155 ~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 155 IFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred HHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 22344444444567799999999999999999987433 322 222333466665
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.061 Score=52.95 Aligned_cols=111 Identities=13% Similarity=0.057 Sum_probs=71.7
Q ss_pred HHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHhCCC
Q 003313 431 LAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDH-LAIAKETGRRLGIG 509 (831)
Q Consensus 431 ~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~-~~~a~~ia~~~gi~ 509 (831)
+.+.|.+.+.+-.++ ++.-- =...+.+++.+++++|++.|+++.++|+.+ ...+..+.+.+|+.
T Consensus 20 ~~~~~v~~vv~D~Dg-------------tl~~~--~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 20 LKKVGIKGVVLDKDN-------------TLVYP--DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred HHHCCCCEEEEecCC-------------ccccC--CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 345788888776543 11100 123577999999999999999999999988 56777777888763
Q ss_pred CCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCc-cChhhhccCCeeE
Q 003313 510 TNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGV-NDAPALKKADIGI 583 (831)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~-ND~~al~~AdvgI 583 (831)
.. .+ ...-.|+-=..+.+.+.-..+.++||||.. .|..+-+.|++-.
T Consensus 85 ~~-------~~--------------------~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~ 132 (170)
T TIGR01668 85 VL-------PH--------------------AVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYT 132 (170)
T ss_pred EE-------cC--------------------CCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeE
Confidence 10 00 001112111223333333455699999998 7999999998843
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.059 Score=55.49 Aligned_cols=123 Identities=15% Similarity=0.101 Sum_probs=74.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.++++.|+ +|+++.++|+.....+...-+..|+.... ..++...+.. ...-.|+-
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~~----------------~~KP~p~~ 155 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF--DLLVISEQVG----------------VAKPDVAI 155 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc--CEEEEECccC----------------CCCCCHHH
Confidence 46799999999999 68999999998888888877888874210 1111111000 00111111
Q ss_pred HHHHHHHHhhc-CCEEEEEcCCc-cChhhhccCCee-EEec-CchH-HHhhhcCEEEeCCChhHHHHHH
Q 003313 549 KYEIVKILQEK-KHVVGMTGDGV-NDAPALKKADIG-IAVA-GATE-AARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 549 K~~iv~~l~~~-g~~v~~iGDG~-ND~~al~~Advg-Ia~~-~~~~-~a~~aadivl~~~~~~~i~~~i 612 (831)
=...++.+.-. .+.+.+|||.. +|+.+-++|++- |.+. .+.. .....+|+++ +++..+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 156 FDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 12333444322 25799999998 799999999985 3433 2221 1112467776 4566666543
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.067 Score=52.98 Aligned_cols=125 Identities=15% Similarity=0.071 Sum_probs=65.5
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHH---------------HHHHHHHHhCCCCCCCCCccccCC-cCCCCCcccHHH
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLA---------------IAKETGRRLGIGTNMYPSSLLLGR-DKDENEALPVDE 533 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~---------------~a~~ia~~~gi~~~~~~~~~~~~~-~~~~~~~~~~~~ 533 (831)
+.|++.+++++|+++|+++.++|.-+.. ....+..+.|+... .++... .... ...+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~i~~~~~~~~~--~~~~~- 99 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLD----GIYYCPHHPEG--VEEFR- 99 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCcc----EEEECCCCCcc--ccccc-
Confidence 5689999999999999999999986631 11122333333210 000000 0000 00000
Q ss_pred HHHhcCcEEEeCh--HHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeE--EecCch---HHHhhhcCEEEeCCChh
Q 003313 534 LIEKADGFTDVFA--EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI--AVAGAT---EAARGAADIVLTEPGLS 606 (831)
Q Consensus 534 ~~~~~~v~~~~~P--~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgI--a~~~~~---~~a~~aadivl~~~~~~ 606 (831)
.-.....| +-=....+.+.-....++||||..+|+.+-++|++.. .+..|. ......+|+++. ++.
T Consensus 100 -----~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~--~~~ 172 (176)
T TIGR00213 100 -----QVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLN--SLA 172 (176)
T ss_pred -----CCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEec--cHH
Confidence 00001122 2212333333334567899999999999999999853 443332 112234888873 444
Q ss_pred HH
Q 003313 607 VI 608 (831)
Q Consensus 607 ~i 608 (831)
.+
T Consensus 173 el 174 (176)
T TIGR00213 173 DL 174 (176)
T ss_pred Hh
Confidence 43
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.075 Score=52.34 Aligned_cols=111 Identities=10% Similarity=-0.023 Sum_probs=70.6
Q ss_pred eeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhc
Q 003313 460 FCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGD-HLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKA 538 (831)
Q Consensus 460 ~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD-~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (831)
......-+-+++|++.+.++.|+++|+++.++|+- ....+..+-+.+|+...... ..+..... .
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~--------------~~~~~~Fd-~ 100 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKT--------------VPMHSLFD-D 100 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCc--------------ccHHHhce-e
Confidence 44445555678999999999999999999999976 88888888888887410000 00000000 0
Q ss_pred CcEEEeChHHH--HHHHHHHhh------cCCEEEEEcCCccChhhhccCCeeEEe
Q 003313 539 DGFTDVFAEHK--YEIVKILQE------KKHVVGMTGDGVNDAPALKKADIGIAV 585 (831)
Q Consensus 539 ~v~~~~~P~~K--~~iv~~l~~------~g~~v~~iGDG~ND~~al~~AdvgIa~ 585 (831)
.+.++-.+..| ..+.+.+.+ ..+.++|+||...|+.+-++|++-...
T Consensus 101 iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 101 RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 01111111112 233444432 236799999999999999999887655
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.042 Score=52.66 Aligned_cols=98 Identities=17% Similarity=0.089 Sum_probs=59.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHL---------------AIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDE 533 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (831)
++.|++.++++.|++.|+++.++|+.+. ..+..+.+.+|+.....-.......+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~---------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADN---------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCC----------
Confidence 4689999999999999999999998762 345566677787411000000000000
Q ss_pred HHHhcCcEEEeChHH--HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeE
Q 003313 534 LIEKADGFTDVFAEH--KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI 583 (831)
Q Consensus 534 ~~~~~~v~~~~~P~~--K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgI 583 (831)
... ..|+- =..+++.+.-..+.+.||||...|+.+-+.|++-.
T Consensus 97 ------~~~-~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 97 ------CSC-RKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ------CCC-CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 000 12211 12233333334467999999999999988888754
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.41 Score=52.54 Aligned_cols=61 Identities=7% Similarity=-0.031 Sum_probs=43.8
Q ss_pred HHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccC--CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 003313 429 NKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFD--PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETG 503 (831)
Q Consensus 429 ~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D--~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia 503 (831)
...++...+.+++-|++ +++-+..-.| .+-++..++|++|. .|++++++||+.......+.
T Consensus 104 ~~~~~~k~~llflD~DG-------------TL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 104 MEASRGKQIVMFLDYDG-------------TLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred HHHhcCCCeEEEEecCC-------------cCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 33444445566666665 5555544333 36788999999999 78999999999999888773
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.062 Score=52.35 Aligned_cols=100 Identities=14% Similarity=-0.011 Sum_probs=59.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCC---------------HHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDH---------------LAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDE 533 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~---------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (831)
++-|++.+++++|+++|+++.++|.-. ...+..+.+.+|+.- + ..+.+..... +
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d-~ii~~~~~~~---~---- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF---D-DVLICPHFPD---D---- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce---e-EEEECCCCCC---C----
Confidence 456899999999999999999999852 345566677777741 1 1111100000 0
Q ss_pred HHHhcCcEEEeChH--HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe
Q 003313 534 LIEKADGFTDVFAE--HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV 585 (831)
Q Consensus 534 ~~~~~~v~~~~~P~--~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~ 585 (831)
. .....|. -=..+++.+......+.||||+.+|..+-++|++-...
T Consensus 98 -----~-~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 98 -----N-CDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred -----C-CCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 0 0001221 11222233322335699999999999999999887554
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.33 Score=50.71 Aligned_cols=94 Identities=14% Similarity=0.159 Sum_probs=59.5
Q ss_pred eeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHH--HHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcC
Q 003313 462 GLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAK--ETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKAD 539 (831)
Q Consensus 462 G~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~--~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (831)
|.+.-.+.+-|++.+++++|+++|+++.++|.-....+. ...+++|+..+.. ..+
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~-~~I---------------------- 73 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLP-EMI---------------------- 73 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcccc-ceE----------------------
Confidence 555566788999999999999999999999996554433 4557788753110 111
Q ss_pred cEEEeChHHHHHHHHHHhh---cCCEEEEEcCCccChhhhccCC
Q 003313 540 GFTDVFAEHKYEIVKILQE---KKHVVGMTGDGVNDAPALKKAD 580 (831)
Q Consensus 540 v~~~~~P~~K~~iv~~l~~---~g~~v~~iGDG~ND~~al~~Ad 580 (831)
++.- ......+.+.+++ .+..+.++||+.+|...+..++
T Consensus 74 -i~s~-~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 74 -ISSG-EIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred -EccH-HHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 1110 0001122222232 3567999999999998886544
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.14 Score=53.88 Aligned_cols=85 Identities=15% Similarity=0.099 Sum_probs=57.4
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEe
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLA---IAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDV 544 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 544 (831)
.++-|++.+.++.+++.|+++.++|+.... .+...-+..|+..... .. ++.+-
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~-d~-----------------------lllr~ 172 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE-EH-----------------------LLLKK 172 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc-ce-----------------------EEeCC
Confidence 456799999999999999999999998743 3345556778853211 11 12221
Q ss_pred ChHHHHHHHHHHhhcCCEEEEEcCCccChhhh
Q 003313 545 FAEHKYEIVKILQEKKHVVGMTGDGVNDAPAL 576 (831)
Q Consensus 545 ~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al 576 (831)
....|..-.+.+.+...+++++||-.+|....
T Consensus 173 ~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 173 DKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred CCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 11235455555555667899999999998654
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.042 Score=52.90 Aligned_cols=90 Identities=19% Similarity=0.170 Sum_probs=57.1
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHH
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHK 549 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K 549 (831)
..+++.+.++.|++.|+++.++|+-....+....+.. +... . ..++...+ +..+-.|+-=
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f-~~i~~~~~-----------------~~~Kp~~~~~ 124 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-F-DLILGSDE-----------------FGAKPEPEIF 124 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-C-cEEEecCC-----------------CCCCcCHHHH
Confidence 4479999999999999999999999988888877765 3211 0 11111000 0111122222
Q ss_pred HHHHHHHhhcCCEEEEEcCCccChhhhccCC
Q 003313 550 YEIVKILQEKKHVVGMTGDGVNDAPALKKAD 580 (831)
Q Consensus 550 ~~iv~~l~~~g~~v~~iGDG~ND~~al~~Ad 580 (831)
..+.+.+.-.. .++++||..+|+.+-++|+
T Consensus 125 ~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 125 LAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 33333343334 7999999999998877764
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.21 Score=61.46 Aligned_cols=68 Identities=9% Similarity=0.078 Sum_probs=48.2
Q ss_pred HHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHH-HhCCCeEEEEcCCCHHHHHHHH
Q 003313 425 HEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRA-LKLGVCVKMITGDHLAIAKETG 503 (831)
Q Consensus 425 ~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l-~~~Gi~v~m~TGD~~~~a~~ia 503 (831)
+.....|.....|.+++-|++ |++-.-...-.+-+++.+++++| ++.|+.|+++||+...+....-
T Consensus 585 ~~i~~~y~~~~~rlI~LDyDG-------------TLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f 651 (854)
T PLN02205 585 EHIVSAYKRTTTRAILLDYDG-------------TLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWF 651 (854)
T ss_pred HHHHHHHHhhcCeEEEEecCC-------------cccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHh
Confidence 344556666667888877766 44422222235567899999997 7789999999999999887765
Q ss_pred HH
Q 003313 504 RR 505 (831)
Q Consensus 504 ~~ 505 (831)
..
T Consensus 652 ~~ 653 (854)
T PLN02205 652 SP 653 (854)
T ss_pred CC
Confidence 43
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.093 Score=53.09 Aligned_cols=95 Identities=12% Similarity=0.026 Sum_probs=58.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++-|++.++++.|++.|+++.++|+-... .....+.+|+.... ..++...+.. ...-.|+-
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f--d~i~~s~~~~----------------~~KP~~~~ 165 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF--DFVVTSYEVG----------------AEKPDPKI 165 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc--ceEEeecccC----------------CCCCCHHH
Confidence 56799999999999999999999986543 46666777774210 1111110000 00111211
Q ss_pred HHHHHHHHhhcCCEEEEEcCCc-cChhhhccCCee
Q 003313 549 KYEIVKILQEKKHVVGMTGDGV-NDAPALKKADIG 582 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~-ND~~al~~Advg 582 (831)
=..+++.+.-....++||||+. +|+.+-++|++-
T Consensus 166 ~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 166 FQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 1233334433456799999997 899988888763
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.067 Score=51.32 Aligned_cols=97 Identities=14% Similarity=-0.009 Sum_probs=64.5
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
-++||++.+.++.|+ .++++.++|.-+...+..+-+.+|+... ....++...+.. +..|.
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d~~------------------~~KP~ 103 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDECV------------------FVKGK 103 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECcccc------------------ccCCe
Confidence 357999999999999 5799999999999999999999887421 111122211110 11121
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe
Q 003313 548 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV 585 (831)
Q Consensus 548 ~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~ 585 (831)
=.+.++.+....+.+.++||..+|..+-++|++-|..
T Consensus 104 -~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 104 -YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred -EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecC
Confidence 0111233333456899999999999988777666543
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.38 Score=48.00 Aligned_cols=37 Identities=16% Similarity=0.137 Sum_probs=33.7
Q ss_pred ChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 003313 473 DSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIG 509 (831)
Q Consensus 473 ~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~ 509 (831)
.+.+.+.+|+++|++|+.+|.-....-...-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 5778999999999999999999998888888999986
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.31 Score=50.34 Aligned_cols=104 Identities=20% Similarity=0.198 Sum_probs=65.5
Q ss_pred CCCCChHHHHHHH--HhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCc-CCCCCcccHHHHHHhcCcEEEeC
Q 003313 469 PPRHDSSDTIHRA--LKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRD-KDENEALPVDELIEKADGFTDVF 545 (831)
Q Consensus 469 ~lr~~~~~~I~~l--~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~ 545 (831)
|+-|+.+++++.+ ++.|+.++++|--|...-..+-+.-|+.... .++..... .+..-...+...- .+-+.++.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f--~~I~TNpa~~~~~G~l~v~pyh--~h~C~~C~ 146 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCF--SEIFTNPACFDADGRLRVRPYH--SHGCSLCP 146 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcccc--ceEEeCCceecCCceEEEeCcc--CCCCCcCC
Confidence 5778999999999 5689999999999999888898888885321 01111100 0000000000000 01233444
Q ss_pred h-HHHHHHHHHHhhc----C---CEEEEEcCCccCh-hhh
Q 003313 546 A-EHKYEIVKILQEK----K---HVVGMTGDGVNDA-PAL 576 (831)
Q Consensus 546 P-~~K~~iv~~l~~~----g---~~v~~iGDG~ND~-~al 576 (831)
| -=|..+++.+++. | ..|.++|||.||. |++
T Consensus 147 ~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~ 186 (234)
T PF06888_consen 147 PNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPAL 186 (234)
T ss_pred CccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCccc
Confidence 3 2588888888765 4 6899999999996 454
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.32 Score=46.62 Aligned_cols=110 Identities=13% Similarity=0.167 Sum_probs=76.1
Q ss_pred HHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC
Q 003313 428 INKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLG 507 (831)
Q Consensus 428 ~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~g 507 (831)
.+.+..+|.+.+.+-.++ +++..= ....-|++++=+++++++|+++.++|.-++..+...++.+|
T Consensus 20 ~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~ 84 (175)
T COG2179 20 PDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLG 84 (175)
T ss_pred HHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcC
Confidence 456788899988776554 333321 12244677778899999999999999999999999999999
Q ss_pred CCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhh---cCCEEEEEcCCc-cChhhhccCCee
Q 003313 508 IGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQE---KKHVVGMTGDGV-NDAPALKKADIG 582 (831)
Q Consensus 508 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~---~g~~v~~iGDG~-ND~~al~~Advg 582 (831)
++. ++--..|-. ..+-+++++ ..+.|+||||.. .|+-+=+.|++=
T Consensus 85 v~f-----------------------------i~~A~KP~~-~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~ 133 (175)
T COG2179 85 VPF-----------------------------IYRAKKPFG-RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMR 133 (175)
T ss_pred Cce-----------------------------eecccCccH-HHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcE
Confidence 863 122223332 234444444 467899999975 688776666653
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.14 Score=52.64 Aligned_cols=101 Identities=13% Similarity=0.102 Sum_probs=58.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHH-HHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKE-TGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~-ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
++.|++.+.|+.|++.|+++.++||-....... ..+..|+.. . -..++.+.+.+ + -...-.|+
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~-~-f~~i~~~~~~~-------------~-~~~KP~p~ 141 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS-L-MHHVVTGDDPE-------------V-KQGKPAPD 141 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh-h-CCEEEECChhh-------------c-cCCCCCcH
Confidence 467999999999999999999999977653332 222223321 0 01111111000 0 00011222
Q ss_pred HHHHHHHHHh---hcCCEEEEEcCCccChhhhccCCeeEEe
Q 003313 548 HKYEIVKILQ---EKKHVVGMTGDGVNDAPALKKADIGIAV 585 (831)
Q Consensus 548 ~K~~iv~~l~---~~g~~v~~iGDG~ND~~al~~AdvgIa~ 585 (831)
-=...++.+. -..+.++||||+..|+.|-++|++-...
T Consensus 142 ~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~ 182 (220)
T PLN02811 142 IFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVM 182 (220)
T ss_pred HHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEE
Confidence 2233344443 2346799999999999999999986543
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.39 E-value=0.15 Score=56.11 Aligned_cols=98 Identities=14% Similarity=0.026 Sum_probs=59.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGD---------------HLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDE 533 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (831)
++.|++.+++++|+++|+++.++|+- ....+..+.+..|+.. ..++.+..... +
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f----d~i~i~~~~~s---d---- 98 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF----DEVLICPHFPE---D---- 98 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce----eeEEEeCCcCc---c----
Confidence 57899999999999999999999983 1334555666677631 11111100000 0
Q ss_pred HHHhcCcEEEeChHHHHHHHHHH----hhcCCEEEEEcCCccChhhhccCCeeEEe
Q 003313 534 LIEKADGFTDVFAEHKYEIVKIL----QEKKHVVGMTGDGVNDAPALKKADIGIAV 585 (831)
Q Consensus 534 ~~~~~~v~~~~~P~~K~~iv~~l----~~~g~~v~~iGDG~ND~~al~~AdvgIa~ 585 (831)
...++ .| |..++..+ ......+.||||+.+|..+-+.|++-...
T Consensus 99 -----~~~~r-KP--~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~ 146 (354)
T PRK05446 99 -----NCSCR-KP--KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIR 146 (354)
T ss_pred -----cCCCC-CC--CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEE
Confidence 00011 22 22233222 22346799999999999999999887543
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=93.33 E-value=0.18 Score=51.78 Aligned_cols=99 Identities=14% Similarity=0.101 Sum_probs=65.0
Q ss_pred cCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC---CCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEE
Q 003313 467 FDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLG---IGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTD 543 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~g---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 543 (831)
+-++.+|+.+++++|+++|+++.++|..+......+-+..+ +.. ..+ ..+ + ..+...
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~-~f~-~~f-----d-------------~~~g~K 152 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTP-YFS-GYF-----D-------------TTVGLK 152 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhh-hcc-eEE-----E-------------eCcccC
Confidence 34688999999999999999999999988776666655542 211 000 000 0 001111
Q ss_pred eChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe
Q 003313 544 VFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV 585 (831)
Q Consensus 544 ~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~ 585 (831)
-.|+-=..+++.+.-..+.++++||...|+.|-++|++-...
T Consensus 153 P~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 153 TEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 223322445555554557799999999999999999987644
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.14 E-value=0.13 Score=53.96 Aligned_cols=64 Identities=22% Similarity=0.177 Sum_probs=46.3
Q ss_pred ChHHHHHHHHHHhhc----CCEEEEEcCCccChhhhccC--------CeeEEecCchHHHhhhcCEEEeCCChhHHHHHH
Q 003313 545 FAEHKYEIVKILQEK----KHVVGMTGDGVNDAPALKKA--------DIGIAVAGATEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 545 ~P~~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~A--------dvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i 612 (831)
.+.+|...++.+.++ ...++++||+.||.+|++.+ ..||+|+.|. .+..|++++. +...+...+
T Consensus 164 ~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~~L 239 (244)
T TIGR00685 164 RFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLEFL 239 (244)
T ss_pred CCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHHHH
Confidence 345687777666543 45799999999999999988 5888886443 4567888884 566665554
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.62 E-value=0.095 Score=53.87 Aligned_cols=97 Identities=10% Similarity=0.091 Sum_probs=62.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.++++.| ++++.++|+.....+...-+..|+.... +..++.+.+.. ..+-.|+-
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~----------------~~KP~p~~ 147 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQ----------------RWKPDPAL 147 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcC----------------CCCCChHH
Confidence 4568999999998 4999999999888887777778874311 11111111100 00112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV 585 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~ 585 (831)
=....+.+.-..+.++|+||..+|+.+-++|++.+..
T Consensus 148 ~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 148 MFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 2333344433445699999999999999999988754
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=92.57 E-value=0.52 Score=59.81 Aligned_cols=127 Identities=11% Similarity=0.091 Sum_probs=80.1
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHH
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHK 549 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K 549 (831)
+.|++.+.+++|+++|+++.++|+-....+...-+..|+..... ..++...+.. ...-.|+-=
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~F-d~iv~~~~~~----------------~~KP~Pe~~ 224 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMF-DAIVSADAFE----------------NLKPAPDIF 224 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHC-CEEEECcccc----------------cCCCCHHHH
Confidence 56899999999999999999999999988888888888852111 1111111110 011112222
Q ss_pred HHHHHHHhhcCCEEEEEcCCccChhhhccCCeeE-Eec---CchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 550 YEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI-AVA---GATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 550 ~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgI-a~~---~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
...++.+.-..+.+.++||..+|+.|-++|++-. ++. ...+.....+|+++.+-.--++...+.
T Consensus 225 ~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~ 292 (1057)
T PLN02919 225 LAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILT 292 (1057)
T ss_pred HHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHh
Confidence 3444555545667999999999999999999843 333 223334456788874432223444443
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=92.51 E-value=0.31 Score=47.69 Aligned_cols=94 Identities=10% Similarity=-0.015 Sum_probs=56.5
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHH------------HHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHh
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLA------------IAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEK 537 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~------------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (831)
+-|++.+++++|+++|+++.++|.-... .+..+.+.+|+.. ...+......
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~----~~ii~~~~~~------------- 105 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI----QVLAATHAGL------------- 105 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE----EEEEecCCCC-------------
Confidence 3489999999999999999999975532 3556778888742 1111111000
Q ss_pred cCcEEEeChHHHHHHHHHHh--hcCCEEEEEcCCc--------cChhhhccCCeeE
Q 003313 538 ADGFTDVFAEHKYEIVKILQ--EKKHVVGMTGDGV--------NDAPALKKADIGI 583 (831)
Q Consensus 538 ~~v~~~~~P~~K~~iv~~l~--~~g~~v~~iGDG~--------ND~~al~~AdvgI 583 (831)
...-.|+-=....+.+. -..+.+.||||.. +|..+-++|++-.
T Consensus 106 ---~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 106 ---YRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred ---CCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 00011111123333333 2335699999986 6999888887643
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=92.36 E-value=0.38 Score=44.82 Aligned_cols=39 Identities=13% Similarity=0.097 Sum_probs=34.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHhC
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGD-HLAIAKETGRRLG 507 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD-~~~~a~~ia~~~g 507 (831)
++.+++.+.++.|+++|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68899999999999999999999999 6777767666666
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=92.09 E-value=0.53 Score=48.34 Aligned_cols=88 Identities=18% Similarity=0.286 Sum_probs=54.5
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEe
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAI---AKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDV 544 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 544 (831)
-|.-|++.++++.+++.|++|+++||+.... +..--++.|++. ...-.+.+.+.. ..-
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~--~~~LiLR~~~d~-----------------~~~ 179 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG--WKHLILRGLEDS-----------------NKT 179 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC--cCeeeecCCCCC-----------------Cch
Confidence 3677899999999999999999999999755 333334567642 111111110000 000
Q ss_pred ChHHHHHHHHHHhhcC-CEEEEEcCCccChh
Q 003313 545 FAEHKYEIVKILQEKK-HVVGMTGDGVNDAP 574 (831)
Q Consensus 545 ~P~~K~~iv~~l~~~g-~~v~~iGDG~ND~~ 574 (831)
.-+-|.+.-+.+.+.| .+++.+||-.+|..
T Consensus 180 ~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 180 VVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred HhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 0112666666666665 46888999998874
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.50 E-value=0.92 Score=45.43 Aligned_cols=104 Identities=23% Similarity=0.230 Sum_probs=66.1
Q ss_pred CCCCChHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHhCCCC-------CCC---CCccccCCcCCCCCcccHHHHHHh
Q 003313 469 PPRHDSSDTIHRALKLGV-CVKMITGDHLAIAKETGRRLGIGT-------NMY---PSSLLLGRDKDENEALPVDELIEK 537 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi-~v~m~TGD~~~~a~~ia~~~gi~~-------~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 537 (831)
|+-|+..++|+.+++.|- .++++|--|.-....+-+..|+.. |.. ....+.-...- .
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH------------~ 151 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYH------------T 151 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCC------------C
Confidence 667999999999999997 899999999887777777777632 100 00000000000 0
Q ss_pred cCcEEEeChHH--HHHHHHHHhhc-------CCEEEEEcCCccCh-hhhccCCeeEEe
Q 003313 538 ADGFTDVFAEH--KYEIVKILQEK-------KHVVGMTGDGVNDA-PALKKADIGIAV 585 (831)
Q Consensus 538 ~~v~~~~~P~~--K~~iv~~l~~~-------g~~v~~iGDG~ND~-~al~~AdvgIa~ 585 (831)
.+ -|...|.. |..++..++.. -+.+..+|||.||. |+++...--+||
T Consensus 152 ~h-sC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~am 208 (256)
T KOG3120|consen 152 QH-SCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAM 208 (256)
T ss_pred CC-ccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceec
Confidence 01 12233433 66666666543 23789999999995 777776666777
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=91.17 E-value=0.19 Score=51.27 Aligned_cols=98 Identities=12% Similarity=-0.027 Sum_probs=56.7
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHH--HHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeC
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAI--AKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVF 545 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~--a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 545 (831)
-++.|++.+.+++|+++|+++.++|+..... ........++... . ..++...+. ....-.
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~-f-d~v~~s~~~----------------~~~KP~ 154 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL-F-DAVVESCLE----------------GLRKPD 154 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh-C-CEEEEeeec----------------CCCCCC
Confidence 3578999999999999999999999875432 2222222333210 0 001100000 001111
Q ss_pred hHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeE
Q 003313 546 AEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI 583 (831)
Q Consensus 546 P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgI 583 (831)
|+-=...++.+.-....++||||...|+.+-++|++-.
T Consensus 155 p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 155 PRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 22223334444444567899999999999999998853
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=90.61 E-value=52 Score=41.68 Aligned_cols=64 Identities=13% Similarity=0.146 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-----CCe-EEE----EECCEEEEEeCCCcCCCcEEEEcC
Q 003313 103 DSVGIVCLLIINSSISFIEESNAENATAALMAHL-----TPK-TKV----LRDGQWKEQDAAVLVPGDIISIKF 166 (831)
Q Consensus 103 ~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-----~~~-~~V----~rdg~~~~i~~~~lv~GDiI~l~~ 166 (831)
..+++++.++++.+-++.++++.++..+...+.. ..+ ..+ +.-|....+...|.+|.|.+.++.
T Consensus 134 il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g 207 (941)
T TIGR01517 134 ILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISG 207 (941)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEc
Confidence 3444555566677777777776665444333211 222 222 234788899999999999999975
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=90.57 E-value=0.5 Score=51.63 Aligned_cols=91 Identities=15% Similarity=0.075 Sum_probs=66.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----hCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEe
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRR----LGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDV 544 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 544 (831)
++.+++.+++++|++.|+.+.++|.-+...+..+-++ +|+.... .....
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f---------------------------~~~~~ 83 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF---------------------------DARSI 83 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe---------------------------eEEEE
Confidence 3578999999999999999999999999999998887 6664210 01112
Q ss_pred ChHHHHH----HHHHHhhcCCEEEEEcCCccChhhhccCCeeEEec
Q 003313 545 FAEHKYE----IVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA 586 (831)
Q Consensus 545 ~P~~K~~----iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~ 586 (831)
.+..|.. +.+.+.-..+.++|+||...|+.+.+++...+.+-
T Consensus 84 ~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 84 NWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred ecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 2223433 33333334578999999999999999988876553
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=89.76 E-value=0.76 Score=44.82 Aligned_cols=107 Identities=17% Similarity=0.163 Sum_probs=76.1
Q ss_pred HHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCe--EEEEcCC-------CHHHHHH
Q 003313 431 LAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVC--VKMITGD-------HLAIAKE 501 (831)
Q Consensus 431 ~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~--v~m~TGD-------~~~~a~~ 501 (831)
+.+.|.|.+.+-.++ ++ ..-=++++-++..+.+++|++.+.. ++++|.- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 667888888876554 11 1123567888999999999999774 9999986 4788999
Q ss_pred HHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhc-----CCEEEEEcCCc-cChhh
Q 003313 502 TGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEK-----KHVVGMTGDGV-NDAPA 575 (831)
Q Consensus 502 ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~-----g~~v~~iGDG~-ND~~a 575 (831)
+.+.+|+..- .+....|.-..++.+.++.+ .+.++||||-. .|+-+
T Consensus 101 ~~~~lgIpvl----------------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~ 152 (168)
T PF09419_consen 101 LEKALGIPVL----------------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLM 152 (168)
T ss_pred HHHhhCCcEE----------------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHH
Confidence 9999998510 12234665566777877654 56799999964 57766
Q ss_pred hccCC
Q 003313 576 LKKAD 580 (831)
Q Consensus 576 l~~Ad 580 (831)
=+..+
T Consensus 153 gN~~G 157 (168)
T PF09419_consen 153 GNRMG 157 (168)
T ss_pred hhccC
Confidence 55444
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=89.33 E-value=0.87 Score=49.54 Aligned_cols=48 Identities=17% Similarity=0.225 Sum_probs=38.9
Q ss_pred eeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHhCCC
Q 003313 462 GLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETG---RRLGIG 509 (831)
Q Consensus 462 G~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia---~~~gi~ 509 (831)
|.+.-.+.+=+++.++|++|++.|++++++|+....+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555555677799999999999999999999999977766666 456763
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.90 E-value=0.55 Score=47.38 Aligned_cols=98 Identities=10% Similarity=0.030 Sum_probs=57.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-hCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRR-LGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
++.|++.+++++|+++|+++.++|.-+.......-.. .++... . ..++...+.. ...-.|+
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-f-d~v~~s~~~~----------------~~KP~p~ 145 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-A-DHIYLSQDLG----------------MRKPEAR 145 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-c-CEEEEecccC----------------CCCCCHH
Confidence 4689999999999999999999999776544332211 233110 0 0111100000 0011122
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEE
Q 003313 548 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA 584 (831)
Q Consensus 548 ~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa 584 (831)
-=...++.+.-..+.+.++||...|+.+-++|++-..
T Consensus 146 ~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i 182 (199)
T PRK09456 146 IYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSI 182 (199)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEE
Confidence 1133444444455679999999999999999988543
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=88.41 E-value=4.6 Score=44.34 Aligned_cols=66 Identities=20% Similarity=0.190 Sum_probs=44.9
Q ss_pred EeChH---HHHHHHHHHhhc----C---CEEEEEcCCccChhhhccC-----CeeEEecCchHHHhhhcCEEEeCCChhH
Q 003313 543 DVFAE---HKYEIVKILQEK----K---HVVGMTGDGVNDAPALKKA-----DIGIAVAGATEAARGAADIVLTEPGLSV 607 (831)
Q Consensus 543 ~~~P~---~K~~iv~~l~~~----g---~~v~~iGDG~ND~~al~~A-----dvgIa~~~~~~~a~~aadivl~~~~~~~ 607 (831)
++.|. +|...++.+.+. + ..++++||...|-.|++.. ++||-+|.+.. ...|++.+. +...
T Consensus 261 EvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L~--dp~e 336 (354)
T PLN02151 261 EIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSLQ--EPDE 336 (354)
T ss_pred EEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeCC--CHHH
Confidence 44553 788888877653 1 2489999999999999853 67787774332 236888884 4666
Q ss_pred HHHHH
Q 003313 608 ICSAV 612 (831)
Q Consensus 608 i~~~i 612 (831)
+...+
T Consensus 337 V~~~L 341 (354)
T PLN02151 337 VMEFL 341 (354)
T ss_pred HHHHH
Confidence 66555
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=86.33 E-value=0.83 Score=45.33 Aligned_cols=98 Identities=12% Similarity=0.067 Sum_probs=61.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+++++|+ .++.++|+-+...+....+.+|+... .+ .++...+.... ...+.-.|+-
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~-fd-~i~~~~~~~~~------------~~~~KP~p~~ 146 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDC-FD-GIFCFDTANPD------------YLLPKPSPQA 146 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhh-hC-eEEEeecccCc------------cCCCCCCHHH
Confidence 36689999999998 47899999988888899899998431 11 11111000000 0000112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeE
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI 583 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgI 583 (831)
=...++.+......++|+||...|+.+-++|++..
T Consensus 147 ~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 147 YEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 23445555555677999999999999988888754
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=86.08 E-value=1.3 Score=44.05 Aligned_cols=91 Identities=12% Similarity=0.083 Sum_probs=58.8
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHH
Q 003313 474 SSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIV 553 (831)
Q Consensus 474 ~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv 553 (831)
..+.++.|++. +++.++||.....+...-+..|+... . ..++...+.. ..+-.|+-=....
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~-f-d~i~~~~~~~----------------~~KP~p~~~~~~~ 152 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRY-F-DAVVAADDVQ----------------HHKPAPDTFLRCA 152 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhH-c-eEEEehhhcc----------------CCCCChHHHHHHH
Confidence 46899999875 89999999999999999999998531 1 1111111100 0111222223344
Q ss_pred HHHhhcCCEEEEEcCCccChhhhccCCeeE
Q 003313 554 KILQEKKHVVGMTGDGVNDAPALKKADIGI 583 (831)
Q Consensus 554 ~~l~~~g~~v~~iGDG~ND~~al~~AdvgI 583 (831)
+.++.....+.++||..+|+.+-++|++-.
T Consensus 153 ~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 153 QLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 444444456889999999999999988753
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=85.92 E-value=0.62 Score=41.47 Aligned_cols=48 Identities=21% Similarity=0.266 Sum_probs=36.7
Q ss_pred eeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHhCCC
Q 003313 462 GLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETG---RRLGIG 509 (831)
Q Consensus 462 G~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia---~~~gi~ 509 (831)
|++.-.+++=|++.++|+.|+++|++++++|.....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 666677888899999999999999999999998865544444 556774
|
... |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=84.13 E-value=3.7 Score=39.55 Aligned_cols=103 Identities=15% Similarity=0.114 Sum_probs=66.7
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHH---HHHh-----CCCCCCCCCccccCCcCCCCCcccHHHHHHhcC
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKET---GRRL-----GIGTNMYPSSLLLGRDKDENEALPVDELIEKAD 539 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~i---a~~~-----gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (831)
|..++++.+..+.+++.|++++-+|++...-+... -.+. +++.. -++. +...+...+. -+
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~G----pv~~-------sP~~l~~al~-rE 93 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDG----PVLL-------SPDSLFSALH-RE 93 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCC----CEEE-------CCcchhhhhh-cc
Confidence 68999999999999999999999999996544332 2232 33211 0110 0011111110 01
Q ss_pred cEEEeChHHHHHHHHHHhhc-----CCEEEEEcCCccChhhhccCCee
Q 003313 540 GFTDVFAEHKYEIVKILQEK-----KHVVGMTGDGVNDAPALKKADIG 582 (831)
Q Consensus 540 v~~~~~P~~K~~iv~~l~~~-----g~~v~~iGDG~ND~~al~~Advg 582 (831)
+..+-.-+.|...++.++.. ...++..|...+|+.+.++++|-
T Consensus 94 vi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 94 VISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 34444446788888888763 45688899999999999988764
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=83.61 E-value=2.2 Score=44.11 Aligned_cols=89 Identities=20% Similarity=0.200 Sum_probs=54.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeC
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLA---IAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVF 545 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 545 (831)
+.=|++.+.++.+++.|++|+.+||++.. .+..=-++.|.... +.-.+.+..... ....
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~--~~l~lr~~~~~~----------------~~~~ 176 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW--DHLILRPDKDPS----------------KKSA 176 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB--SCGEEEEESSTS----------------S---
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc--chhccccccccc----------------cccc
Confidence 34478999999999999999999999854 23333456675421 111111100000 0001
Q ss_pred hHHHHHHHHHHhhcC-CEEEEEcCCccChhh
Q 003313 546 AEHKYEIVKILQEKK-HVVGMTGDGVNDAPA 575 (831)
Q Consensus 546 P~~K~~iv~~l~~~g-~~v~~iGDG~ND~~a 575 (831)
.+-|...-+.++++| ++++.+||-.+|...
T Consensus 177 ~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 177 VEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ---SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred cccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 234777777888774 578899999999875
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=82.89 E-value=2.3 Score=42.60 Aligned_cols=91 Identities=14% Similarity=0.066 Sum_probs=52.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCC--CCCccccCCcCCCCCcccHHHHHHhcCcEEEe-C
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNM--YPSSLLLGRDKDENEALPVDELIEKADGFTDV-F 545 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~ 545 (831)
++.|++.+++++|++.+ +.+++|.-+.......-+.+|+..-. .-..++ .++. .
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~----------------------~~~~~~ 130 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVL----------------------MCGHDE 130 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEE----------------------EeccCc
Confidence 36789999999999975 56666765444444344556653100 001111 1111 1
Q ss_pred --hHHHHHHHHHHhhcCCEEEEEcCCccChhhhccC--CeeEE
Q 003313 546 --AEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKA--DIGIA 584 (831)
Q Consensus 546 --P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~A--dvgIa 584 (831)
|+--...++.++ .+.++|+||..+|+.+-++| ++-..
T Consensus 131 ~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i 171 (197)
T PHA02597 131 SKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVI 171 (197)
T ss_pred ccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEE
Confidence 222222333333 34688999999999999999 88543
|
2 hypothetical protein; Provisional |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=82.68 E-value=3.9 Score=47.28 Aligned_cols=102 Identities=15% Similarity=0.060 Sum_probs=62.6
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-hCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEE--EeCh
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRR-LGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFT--DVFA 546 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~P 546 (831)
+++++.+ .+++.|.+ +++|+-...-+..+|++ +|++.- .+.+++...+..+... +-. .+.-
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~V-------IgTeLev~~~G~~TG~-----i~g~~~c~G 174 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADKV-------LGTELEVSKSGRATGF-----MKKPGVLVG 174 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCEE-------EecccEECcCCEEeee-----ecCCCCCcc
Confidence 5555444 45567754 99999999999999987 898631 1111110000000000 000 1345
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecC
Q 003313 547 EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAG 587 (831)
Q Consensus 547 ~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~ 587 (831)
++|.+-++..........+.||..||.|||+.||-+.+++.
T Consensus 175 e~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 175 DHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred HHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 67887776433212223688999999999999999999985
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=81.82 E-value=2.3 Score=39.46 Aligned_cols=32 Identities=9% Similarity=0.124 Sum_probs=28.2
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHH
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIA 499 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a 499 (831)
+++.+++.++++++++.|+.++++||++....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 56888999999999999999999999987643
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=80.65 E-value=14 Score=39.45 Aligned_cols=48 Identities=21% Similarity=0.253 Sum_probs=35.8
Q ss_pred eeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHH---HHHHhCCC
Q 003313 462 GLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKE---TGRRLGIG 509 (831)
Q Consensus 462 G~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~---ia~~~gi~ 509 (831)
|.+.-.+.+=+++.++|++|++.|++++++|+....+... --+++|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 4555567777899999999999999999999976443333 23556774
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 831 | ||||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 0.0 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-102 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 5e-32 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 1e-31 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 2e-30 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 4e-28 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 4e-22 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 4e-22 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 4e-22 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 1e-21 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 2e-11 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 5e-07 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 6e-07 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 6e-05 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 6e-05 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 1e-04 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 1e-04 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 3e-04 |
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 831 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 0.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-113 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-112 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-50 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 4e-49 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 2e-26 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 5e-25 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 6e-24 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 6e-23 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 8e-13 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 6e-23 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-13 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-22 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 9e-13 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 9e-15 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 1e-13 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 8e-13 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-08 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 5e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 7e-05 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 8e-05 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 1e-04 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 1e-04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 1e-04 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 1e-04 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 1e-04 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 1e-04 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 1e-04 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 2e-04 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 2e-04 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 2e-04 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 2e-04 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 4e-04 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 7e-04 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 992 bits (2567), Expect = 0.0
Identities = 583/840 (69%), Positives = 680/840 (80%), Gaps = 29/840 (3%)
Query: 20 IDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKPENKFLKFLSFMWNPLSW 79
+DL ++P++EVF QL +R+GL++++ E R++ FG NKLE+K E+K LKFL FMWNPLSW
Sbjct: 12 VDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLGFMWNPLSW 71
Query: 80 VMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPK 139
VME AA+MAIALANG G+ PDWQD VGI+CLL+INS+ISFIEE+NA NA AALMA L PK
Sbjct: 72 VMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPK 131
Query: 140 TKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKE 199
TKVLRDG+W EQ+AA+LVPGDI+SIK GD+IPADARLLEGDPLK+DQS LTGESL VTK
Sbjct: 132 TKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKH 191
Query: 200 TGDEVFSGLTCKH-----------VHSFFGKAADLVDSTEVVGHFQQVLTSIGNFCICFI 248
G EVFSG TCK VH+FFGKAA LVDST VGHFQ+VLT+IGNFCIC I
Sbjct: 192 PGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSI 251
Query: 249 TVGMILEIIVMFPIQHRLYRDRIN----------------MLSVTLAIASYRLSQRGAIT 292
+GM++EIIVM+PIQ R YRD I+ +LSVT+AI S+RLSQ+GAIT
Sbjct: 252 AIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 311
Query: 293 KRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQ 352
KRMTAIEEMA MDVLCS KT LTLN+L+VD+NL+EVF + ++KD ++L AA ASR+ENQ
Sbjct: 312 KRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQ 371
Query: 353 DAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILN 412
DAIDAA++ MLADPKEARA I EVHFLPFNPVDKRTA+TY D GNW+R SKGAPEQIL
Sbjct: 372 DAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILE 431
Query: 413 MCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRH 472
+ + ++ KV II+K AE+GLRSLAVA Q VPE T++SPG P F GLLPLFDPPRH
Sbjct: 432 LAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRH 491
Query: 473 DSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEA-LPV 531
DS++TI RAL LGV VKMITGD LAI KETGRRLG+GTNMYPSS LLG KD N A +PV
Sbjct: 492 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPV 551
Query: 532 DELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEA 591
+ELIEKADGF VF EHKYEIVK LQE+KH+VGMTGDGVNDAPALKKADIGIAVA AT+A
Sbjct: 552 EELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDA 611
Query: 592 ARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWEYDF 651
ARGA+DIVLTEPGLSVI SAVLTSR +FQ MKN I+AVSITI IV F+L+ALIWE+DF
Sbjct: 612 ARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDF 671
Query: 652 PPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAAGIVIGNYLALVTILFYWVV 711
FMVLIIA+LNDGTI+TISK RVK S PD WKL EIFA G+V+G Y A++T++F+W
Sbjct: 672 SAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAIMTVIFFWAA 731
Query: 712 VHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTRSQSWSFLERPGALLMCAF 771
TDFF F VRS+ N E+ AV+LQVSIISQALIFVTRS+SWSF+ERPGALLM AF
Sbjct: 732 HKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVERPGALLMIAF 791
Query: 772 VLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVR-TLSREAWN 830
++AQL+ATLIAVYA+ FA I GIGWGWAGVIWLYS+V Y LD+ KF +R LS +AW
Sbjct: 792 LIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYILSGKAWL 851
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 893 bits (2309), Expect = 0.0
Identities = 262/842 (31%), Positives = 430/842 (51%), Gaps = 68/842 (8%)
Query: 21 DLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKPENKFLKFLSFMWNPLSWV 80
R+ +++ TR GL+SE+ R + +G N+++++ EN FLKFL F P+ +V
Sbjct: 70 GGGRVVPEDMLQT--DTRVGLTSEEVVQRRRKYGLNQMKEEKENHFLKFLGFFVGPIQFV 127
Query: 81 METAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKT 140
ME AA++A L DW D I LL++N+ + F++E A + L L K
Sbjct: 128 MEGAAVLAAGL-------EDWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKA 180
Query: 141 KVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDP-LKIDQSELTGESLTVTKE 199
VLRDG KE +A +VPGDI+ ++ G +IPAD R++ D L++DQS LTGESL V K
Sbjct: 181 VVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKH 240
Query: 200 TGDEVFSGLTCKH-----------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCICF 247
GD+VF+ K ++F G+AA LV++ GHF +VL IG +
Sbjct: 241 KGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLIL 300
Query: 248 ITVGMILEIIVMFPIQHRLYRDRIN----------------MLSVTLAIASYRLSQRGAI 291
+ +++ + F + + +++ T+A+ + L+++ AI
Sbjct: 301 VIFTLLIVWVSSF-YRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAI 359
Query: 292 TKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLEN 351
++++AIE +A +++LCS KT LT N+L++ +D + L+L A A+ +
Sbjct: 360 VQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYT---VAGVDPEDLMLTACLAASRKK 416
Query: 352 Q--DAIDAAIINMLADPKEARANINE---VHFLPFNPVDKRTAITYTDSEGNWYRASKGA 406
+ DAID A + L A++ +++ + F PF+PV K+ +G KGA
Sbjct: 417 KGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGA 476
Query: 407 PEQILNMCQEK----EEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCG 462
P +L +E EE+ + + A +G RSL VA + G G
Sbjct: 477 PLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG--------EGSWEILG 528
Query: 463 LLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRD 522
++P DPPRHD+ T+ A LG+ +KM+TGD + IA+ET R+LG+GTN+Y + L
Sbjct: 529 IMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGG 588
Query: 523 KDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 582
+ V + +E ADGF +VF +HKY +V+ILQ++ ++V MTGDGVNDAP+LKKAD G
Sbjct: 589 GGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTG 648
Query: 583 IAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVL 642
IAV G+++AAR AADIV PGL I A+ TSR +F M +++ ++++IH+ + L
Sbjct: 649 IAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGL 708
Query: 643 LALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAAGIVIGNYLAL 702
I +V+ IA+ D + I+ S P W L +++ +++G LA+
Sbjct: 709 WIAILNRSLNIELVVFIAIFADVATLAIAYDNAPYSQTPVKWNLPKLWGMSVLLGVVLAV 768
Query: 703 VTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTRSQSWSFLER 762
T + + + N + + LQ+S+ LIF+TR+ +
Sbjct: 769 GTWITVTTMYAQ------GENGGIVQNFGNMDEVLFLQISLTENWLIFITRANGPFWSSI 822
Query: 763 PGALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVR 822
P L A L ++AT ++ + S IW++S + ++ + + ++
Sbjct: 823 PSWQLSGAIFLVDILATCFTIWG---WFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQ 879
Query: 823 TL 824
Sbjct: 880 DS 881
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 368 bits (946), Expect = e-113
Identities = 207/1009 (20%), Positives = 373/1009 (36%), Gaps = 234/1009 (23%)
Query: 24 RLPLDEVFGQLGT-TRQGLSSEDAEVRLKFFGSNKL-EKKPENKFLKFLSFMWNPLSWVM 81
+L LDE+ + GT +GL++ A+ L G N L +++KF ++ S ++
Sbjct: 50 KLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILL 109
Query: 82 ETAALMAIAL------ANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAH 135
A++ + V + ++I+ S+ +E+ + +
Sbjct: 110 WIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNM 169
Query: 136 LTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLT 195
+ + V+RDG+ +A +V GD++ +K GD IPAD R++ K+D S LTGES
Sbjct: 170 VPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVDNSSLTGESEP 229
Query: 196 VTK----------ETGDEVFSGLTCKH------V-----HSFFGKAADLVDSTEV----- 229
T+ ET + F C V + G+ A L EV
Sbjct: 230 QTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRTPI 289
Query: 230 ---VGHFQQVLTSIGNF-CICFITVGMIL--EIIVMFPIQHRLYRDRINMLS-------- 275
+ HF ++T + F + F + +IL + I ++
Sbjct: 290 AIEIEHFIHIITGVAVFLGVSFFILSLILGYSWLEAV----------IFLIGIIVANVPE 339
Query: 276 -------VTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTV-----D 323
V L + + R++++ + K + A+E + +CS KT LT NR+TV D
Sbjct: 340 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD 399
Query: 324 RNLIEV----------FNRDMDKDILVLLAA----RASRLENQ------------DAIDA 357
+ E F++ + A RA Q DA ++
Sbjct: 400 NQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASES 459
Query: 358 AIINM----LADPKEARANINEVHFLPFNPVDKR--TAITYTDSEGNWYRA-SKGAPEQI 410
A++ + R ++ +PFN +K + S + Y KGAPE+I
Sbjct: 460 ALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERI 519
Query: 411 LNMCQEKEEIGGKVHEI-----------INKLAEKGLRSLAVAVQEVPEMT--------E 451
L+ C + G + +L G R L +PE
Sbjct: 520 LDRCS-TILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDA 578
Query: 452 DSPGGPRS---FCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDH----LAIAKETGR 504
D P P + F GL+ + DPPR D + + G+ V M+TGDH AIAK
Sbjct: 579 DEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG--- 635
Query: 505 RLGIGTNMYPSSLLLGRDKDEN-------------------EALPVDELIEKADGFTD-V 544
+GI + + + + + L + L + T+ V
Sbjct: 636 -VGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIV 694
Query: 545 FA----EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA--VAGATEAARGAADI 598
FA + K IV+ Q + +V +TGDGVND+PALKKADIG+A ++G ++ ++ AAD+
Sbjct: 695 FARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISG-SDVSKQAADM 753
Query: 599 VLTEPGLSVICSAVLTSRTVFQ-IMKNCMIHAVSIT---------IHIVLSFVLLALIWE 648
+L + + I + V R +F + K SI I L F++ +
Sbjct: 754 ILLDDNFASIVTGVEEGRLIFDNLKK-------SIAYTLTSNIPEITPFLVFIIGNV--- 803
Query: 649 YDFP--PFMVLIIAVLNDGTIITISKG-------------RVKSSLRPDGWKLNEIFAAG 693
P +L I + D + IS R + + +L I A
Sbjct: 804 -PLPLGTVTILCIDLGTDM-VPAISLAYEQAESDIMKRQPRNPKTDKLVNERL--ISMAY 859
Query: 694 IVIGNYLALVTILFYWVVVH---------------------TDFFETHFHVRSLSSNTEE 732
IG AL Y+V++ +D ++ +
Sbjct: 860 GQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIV 919
Query: 733 ISSA--VHLQVSIISQ-ALIFVTRSQSWSFLERP-GALLMCAFVLAQLVATLIAVYA--- 785
+ ++ Q A + + +++ S ++ ++ + + Y
Sbjct: 920 EFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGT 979
Query: 786 HISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVRT-----LSREAW 829
++ + + W + YSL+ ++ ++ +F +R + +E +
Sbjct: 980 DVALR-MYPLKPSWWFCAFPYSLIIFLYDEMRRFIIRRSPGGWVEQETY 1027
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 367 bits (944), Expect = e-112
Identities = 199/998 (19%), Positives = 352/998 (35%), Gaps = 228/998 (22%)
Query: 24 RLPLDEVFGQLGTT-RQGLSSEDAEVRLKFFGSNKL-EKKPENKFLKFLSFMWNPLSWVM 81
+L + E+ + T+ +GLS+ A L G N L + +++KF + L +M
Sbjct: 55 QLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLM 114
Query: 82 ETAALMAIAL------ANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAH 135
AA + + + ++ ++ ++++ + +E + N A+
Sbjct: 115 WVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNL 174
Query: 136 LTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLT 195
+ + V+RDG + +A LV GD++ +K GD +PAD R+L+ K+D S LTGES
Sbjct: 175 VPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEP 234
Query: 196 VTK----------ETGDEVFSGLTCKH------V-----HSFFGKAADLVDSTEV----- 229
T+ ET + F C V + G+ A L E
Sbjct: 235 QTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKTPI 294
Query: 230 ---VGHFQQVLTSIG-NFCICFITVGMIL--EIIVMFPIQHRLYRDRINMLS-------- 275
+ HF ++ + F F V M + + + ++
Sbjct: 295 AIEIEHFVDIIAGLAILFGATFFIVAMCIGYTFLRAM----------VFFMAIVVAYVPE 344
Query: 276 -------VTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTV-----D 323
V L++ + RL+ + + K + A+E + V+CS KT LT NR+TV D
Sbjct: 345 GLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFD 404
Query: 324 RNLIEV----------FNRDMDKDILVLLAA----RASRLENQ------------DAIDA 357
++ F++ + + RA+ Q DA +
Sbjct: 405 NHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASET 464
Query: 358 AIINM----LADPKEARANINEVHFLPFNPVDKR--TAITYTDSEGNWYRA-SKGAPEQI 410
A++ L + R +V +PFN +K + T D + KGAPE++
Sbjct: 465 ALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERV 524
Query: 411 LNMCQEKEEIGGKVHEI-----------INKLAEKGLRSLAVAVQEVPEMTEDSPGGPRS 459
L C I G+ + L G R L + E
Sbjct: 525 LERCS-SILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDV 583
Query: 460 -----------FCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDH----LAIAKETGR 504
F GL+ + DPPR D + + G+ V M+TGDH AIA
Sbjct: 584 EAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAAS--- 640
Query: 505 RLGIGTNMYPSSLLLGRDKDEN-------------------EALPVDELIEKADGFTD-V 544
+GI + + + + + EL+E + V
Sbjct: 641 -VGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHPEMV 699
Query: 545 FA----EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA--VAGATEAARGAADI 598
FA + K IV+ Q +V +TGDGVND+PALKKADIG+A +AG ++AA+ AAD+
Sbjct: 700 FARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAG-SDAAKNAADM 758
Query: 599 VLTEPGLSVICSAVLTSRTVFQ-IMKNCMIHAVSIT---------IHIVLSFVLLALIWE 648
+L + + I + V R +F + K SI + L ++ +++
Sbjct: 759 ILLDDNFASIVTGVEQGRLIFDNLKK-------SIAYTLTKNIPELTPYLIYITVSV--- 808
Query: 649 YDFP--PFMVLIIAVLNDGT------------IITISKGRVKSSLRPDGWKLNEIFAAGI 694
P +L I + D I + R R L +
Sbjct: 809 -PLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPL--AAYSYF 865
Query: 695 VIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNT------------------------ 730
IG + Y+ + + + V
Sbjct: 866 QIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQ 925
Query: 731 EEISSAVHLQVSIISQALIFVTRSQSWSFLERP--GALLMCAFVLAQLVATLIAVYA--- 785
+ + + + A + + +++ S ++ ++ ++ Q+ Y
Sbjct: 926 YTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGM 985
Query: 786 HISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVRT 823
F I + W V + L+ ++ +I K VR
Sbjct: 986 PNIFN-FMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRC 1022
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 191 bits (488), Expect = 1e-50
Identities = 89/319 (27%), Positives = 137/319 (42%), Gaps = 37/319 (11%)
Query: 339 LVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTDSEGN 398
L L + + + + + A R + + L F+ K ++ + ++ +
Sbjct: 446 LTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSS 505
Query: 399 WYRAS-----KGAPEQILNMCQEKEEIGGKV-------HEIINK-----LAEKGLRSLAV 441
KGAPE +++ C +V +I++ LR LA+
Sbjct: 506 RAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLAL 565
Query: 442 AVQEVP----EMTEDSPGGPRS------FCGLLPLFDPPRHDSSDTIHRALKLGVCVKMI 491
A ++ P EM D F G++ + DPPR + +I G+ V MI
Sbjct: 566 ATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMI 625
Query: 492 TGDHLAIAKETGRRLGIGTNMYPSSL--LLGRDKDENEALPVDELIEKADGFTDVFA--- 546
TGD+ A RR+GI + GR E + LP+ E E FA
Sbjct: 626 TGDNKGTAIAICRRIGIFGENEEVADRAYTGR---EFDDLPLAEQREACRR-ACCFARVE 681
Query: 547 -EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGL 605
HK +IV+ LQ + MTGDGVNDAPALKKA+IGIA+ T A+ A+++VL +
Sbjct: 682 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNF 741
Query: 606 SVICSAVLTSRTVFQIMKN 624
S I +AV R ++ MK
Sbjct: 742 STIVAAVEEGRAIYNNMKQ 760
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 187 bits (476), Expect = 4e-49
Identities = 85/360 (23%), Positives = 150/360 (41%), Gaps = 61/360 (16%)
Query: 25 LPLDEVFGQLGTTR-QGLSSEDAEVRLKFFGSNKL-EKKPENKFLKFLSFMWNPLSWVME 82
+E G + GL+ + + L+ +G N+L ++ ++ + + + L ++
Sbjct: 8 KSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILL 67
Query: 83 TAALMAIALA---NGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPK 139
AA ++ LA G + + I+ +LI N+ + +E NAENA AL +
Sbjct: 68 LAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEM 127
Query: 140 TKVLRDGQWKEQ--DAAVLVPGDIISIKFGDVIPADARLL--EGDPLKIDQSELTGESLT 195
KV R + Q A +VPGDI+ + GD +PAD R+L + L++DQS LTGES++
Sbjct: 128 GKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVS 187
Query: 196 VTKET----------GDE---VFSGLT-----CKHV------HSFFGKAADLVDSTEVV- 230
V K T D+ +FSG + + GK D + +TE
Sbjct: 188 VIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDK 247
Query: 231 -------GHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRINML--------- 274
F + L+ IC + + R I
Sbjct: 248 TPLQQKLDEFGEQLS-KVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVA 306
Query: 275 ----------SVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDR 324
+ LA+ + R++++ AI + + ++E + V+CS KT LT N+++V +
Sbjct: 307 AIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCK 366
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 2e-26
Identities = 34/162 (20%), Positives = 65/162 (40%), Gaps = 29/162 (17%)
Query: 462 GLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGR 521
+ D PR + D + + G+ + +++GD KE + L I
Sbjct: 129 ASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI------------- 175
Query: 522 DKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI 581
E + ++ E K I++ L++ + V M GDGVNDA AL AD+
Sbjct: 176 --QEYYS--------------NLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADV 219
Query: 582 GIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMK 623
+A+ + ++ ADI+L + + + + + +
Sbjct: 220 SVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 104 bits (263), Expect = 5e-25
Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 30/162 (18%)
Query: 462 GLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGR 521
G++ L D R +S + I + +G+ M+TGD+ +AK LG+
Sbjct: 137 GVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL------------- 183
Query: 522 DKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI 581
D+ A +V K E VK +Q+ K+V M GDGVNDAPAL +AD+
Sbjct: 184 --DDYFA--------------EVLPHEKAEKVKEVQQ-KYVTAMVGDGVNDAPALAQADV 226
Query: 582 GIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMK 623
GIA+ T+ A ADIVL + + V SR +
Sbjct: 227 GIAIGAGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFH 268
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 6e-24
Identities = 56/211 (26%), Positives = 85/211 (40%), Gaps = 43/211 (20%)
Query: 413 MCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRH 472
M + +V + KL + ++ VA E G++ + D +
Sbjct: 120 MEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVE-------------GIIAVSDTLKE 166
Query: 473 DSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVD 532
+ + ++G+ V MITGD+ A+ R L + D A
Sbjct: 167 SAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL---------------DLVIA---- 207
Query: 533 ELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAA 592
+V K E VK LQ K VV GDG+NDAPAL +AD+GIAV ++ A
Sbjct: 208 ----------EVLPHQKSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVA 256
Query: 593 RGAADIVLTEPGLSVICSAVLTSRTVFQIMK 623
+ DIVL L + +A+ SR +K
Sbjct: 257 VESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 6e-23
Identities = 53/163 (32%), Positives = 71/163 (43%), Gaps = 32/163 (19%)
Query: 462 GLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGR 521
LL + DP + + +TI + G+ + M+TGD A+ LGI
Sbjct: 547 ALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGI------------- 593
Query: 522 DKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI 581
K E +P E K IV L++K +V M GDGVNDAPAL KADI
Sbjct: 594 KKVVAEIMP----------------EDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADI 637
Query: 582 GIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKN 624
GIA+ T+ A +A + L L I A S + M N
Sbjct: 638 GIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSEST---MSN 677
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 71.0 bits (175), Expect = 8e-13
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 128 ATAALMAHLTPKT--KVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKID 185
A AL+ L P++ ++ DG +E + GD++ ++ G+ IP D + EG +D
Sbjct: 215 AIRALLK-LVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF-VD 272
Query: 186 QSELTGESLTVTKETGDEVFSG 207
+S +TGE + V KE +V
Sbjct: 273 ESMVTGEPIPVAKEASAKVIGA 294
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 6e-23
Identities = 57/212 (26%), Positives = 85/212 (40%), Gaps = 46/212 (21%)
Query: 413 MCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRH 472
M + +V + KL + ++ VA E G++ + D +
Sbjct: 492 MEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVE-------------GIIAVSDTLKE 538
Query: 473 DSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVD 532
+ + ++G+ V MITGD+ A+ R L + D E LP
Sbjct: 539 SAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL-------------DLVIAEVLP-- 583
Query: 533 ELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAA 592
K E VK LQ K+ VV GDG+NDAPAL +AD+GIAV ++ A
Sbjct: 584 --------------HQKSEEVKKLQAKE-VVAFVGDGINDAPALAQADLGIAVGSGSDVA 628
Query: 593 RGAADIVLTEPGLSVICSAVLTSRTVFQIMKN 624
+ DIVL L + +A+ SR M
Sbjct: 629 VESGDIVLIRDDLRDVVAAIQLSRKT---MSK 657
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 73.3 bits (181), Expect = 2e-13
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 128 ATAALMAHLTPKT-KVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQ 186
A L+ L KT V+RDG+ + GDI+ ++ G+ IP D ++EG+ +D+
Sbjct: 201 AIKKLVG-LQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-VDE 258
Query: 187 SELTGESLTVTKETGDEVFSG 207
S ++GE + V K GDEVF
Sbjct: 259 SMISGEPVPVLKSKGDEVFGA 279
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 2e-22
Identities = 57/211 (27%), Positives = 85/211 (40%), Gaps = 43/211 (20%)
Query: 413 MCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRH 472
M + +V + KL + ++ VA E G++ + D +
Sbjct: 414 MEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVE-------------GIIAVSDTLKE 460
Query: 473 DSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVD 532
+ + ++G+ V MITGD+ A+ R L + D E LP
Sbjct: 461 SAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL-------------DLVIAEVLP-- 505
Query: 533 ELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAA 592
K E VK LQ K VV GDG+NDAPAL +AD+GIAV ++ A
Sbjct: 506 --------------HQKSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVA 550
Query: 593 RGAADIVLTEPGLSVICSAVLTSRTVFQIMK 623
+ DIVL L + +A+ SR +K
Sbjct: 551 VESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 581
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 71.0 bits (175), Expect = 9e-13
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 123 SNAENATAALMAHLTPKT-KVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDP 181
S A L+ L KT V+RDG+ + GDI+ ++ G+ IP D ++EG+
Sbjct: 118 SRTGEAIKKLVG-LQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES 176
Query: 182 LKIDQSELTGESLTVTKETGDEVFSG 207
+D+S ++GE + V K GDEVF
Sbjct: 177 -YVDESMISGEPVPVLKSKGDEVFGA 201
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 70.2 bits (173), Expect = 9e-15
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 128 ATAALMAHLTPKT-KVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQ 186
A L+ L KT V+RDG+ + GDI+ ++ G+ IP D ++EG+ +D+
Sbjct: 2 AIKKLVG-LQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-VDE 59
Query: 187 SELTGESLTVTKETGDEVFSG 207
S ++GE + V K GDEVF
Sbjct: 60 SMISGEPVPVLKSKGDEVFGA 80
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 1e-13
Identities = 26/136 (19%), Positives = 55/136 (40%), Gaps = 17/136 (12%)
Query: 353 DAIDAAIINML--ADPKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQI 410
+ +D A++ + + ++ +PF+ +R ++ ++ + KGA ++I
Sbjct: 34 NLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEI 93
Query: 411 LNMCQEKEEIGGKVHEI-----------INKLAEKGLRSLAVAVQEVPEMTEDSPGGPRS 459
LN+C + G++ + + L +GLR +AVA + +P D S
Sbjct: 94 LNVCS-QVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADES 152
Query: 460 ---FCGLLPLFDPPRH 472
G + D H
Sbjct: 153 DLILEGYIAFLDHHHH 168
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 64.8 bits (159), Expect = 8e-13
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 128 ATAALMAHLTPKT-KVLRDGQWKEQDAAVLVP------GDIISIKFGDVIPADARLLEGD 180
A A L++ L ++ + V GDII + G P D R++EG
Sbjct: 8 ALAKLIS-LQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGH 66
Query: 181 PLKIDQSELTGESLTVTKETGDEVFSG 207
+D+S +TGE++ V K+ G V +G
Sbjct: 67 S-MVDESLITGEAMPVAKKPGSTVIAG 92
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 60.6 bits (146), Expect = 2e-09
Identities = 74/618 (11%), Positives = 164/618 (26%), Gaps = 201/618 (32%)
Query: 324 RNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEV-HFLPFN 382
++++ VF + + +D D PK + E+ H +
Sbjct: 19 KDILSVFEDAFVDN-----------FDCKDVQDM--------PKSILSK-EEIDHIIMSK 58
Query: 383 PVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVA 442
T R + ++EE+ V + + ++ + L
Sbjct: 59 DAVSGT-----------LRL-------FWTLLSKQEEM---VQKFVEEVLRINYKFLMSP 97
Query: 443 VQEV---PEMTEDSPGGPRS-FCGLLPLFDP---PRHDSSDTIHRALK-----LGVCVK- 489
++ P M R +F R + +AL V +
Sbjct: 98 IKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG 157
Query: 490 MI-TGDHLAIAKETGRRLGIGTNMYPSS---LLLGRDKDENEAL-PVDELIEKADGFTDV 544
++ +G +A + + M L L L + +L+ + D
Sbjct: 158 VLGSGKT-WVALDVCLSYKVQCKM-DFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTS 215
Query: 545 FAEH-----------KYEIVKILQEKKH-----VVGMTGDGVNDAPALKKADIGIAVAGA 588
++H + E+ ++L+ K + V+ V +A A ++
Sbjct: 216 RSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL----LNVQNAKAWNAFNLS------ 265
Query: 589 TEAARGAADIVLTEPGLSVICSAVLTSR--TVFQIMKNCMIHAVSITIHIVLSFV----- 641
C +LT+R V + +S+ H ++
Sbjct: 266 --------------------CKILLTTRFKQVTDFLSAATTTHISL-DHHSMTLTPDEVK 304
Query: 642 -LLALIWE---YDFP-------PFMV-LIIAVLNDGTIITISKGRVKSSLRPDGWKLNEI 689
LL + D P P + +I + DG + + KL I
Sbjct: 305 SLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDG------LATWDNWKHVNCDKLTTI 358
Query: 690 FAAGIVI-------GNYLALV-----------TILFYW---VVVHTDFFETHFHVRSL-S 727
+ + + + L + W + H SL
Sbjct: 359 IESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE 418
Query: 728 SNTEEISSAVH-LQVSIISQA---------LI----FVTRSQSWSFLERPGALLMCAFV- 772
+E + ++ + + + + ++ S + + +
Sbjct: 419 KQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIG 478
Query: 773 -------LAQLVATLIAVYAHISFAYI------SGIGWGWAGVIW--LYSLVFY------ 811
+ + V+ + F ++ W +G I L L FY
Sbjct: 479 HHLKNIEHPERMTLFRMVF--LDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICD 536
Query: 812 -------ILLDIIKFTVR 822
++ I+ F +
Sbjct: 537 NDPKYERLVNAILDFLPK 554
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.4 bits (135), Expect = 3e-08
Identities = 81/611 (13%), Positives = 159/611 (26%), Gaps = 180/611 (29%)
Query: 3 EDLEKPLLDPENCNCGGIDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKP 62
+D+ K +L E D + + F+ L K
Sbjct: 39 QDMPKSILSKEEI------------DHIIMS--------KDAVSGTLRLFW---TLLSKQ 75
Query: 63 ENKFLKFLSFMWNP-LSWVMETAALMAIALANGGGQGPDWQDSVGIVCL-LIINSSISFI 120
E KF+ + ++M I + P + I + N + F
Sbjct: 76 EEMVQKFVEEVLRINYKFLMS-----PIKTEQ---RQPSMMTRMYIEQRDRLYNDNQVFA 127
Query: 121 E-----ESNAENATAALMAHLTPKTKVLRDG------QW--KE--QDAAVLV--PGDIIS 163
+ AL+ L P VL DG W + V I
Sbjct: 128 KYNVSRLQPYLKLRQALL-ELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFW 186
Query: 164 IKFGDVIPADARL--LEGDPLKIDQSELTG----ESLTVTKETGDEVFSGLTCKHVHSFF 217
+ + + L L+ +ID + + ++ + + L +
Sbjct: 187 LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY--- 243
Query: 218 GKAA----DLVDSTEVVGHFQQVLTSIGNF-C-ICFITVGMILEIIVMFPIQHRLYRDRI 271
+ V + + F N C I T R +
Sbjct: 244 -ENCLLVLLNVQNAKAWNAF--------NLSCKILLTT------------------RFK- 275
Query: 272 NMLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVL-----CSVKT---AALTLNRLTVD 323
VT +++ + ++ + +L C + LT N +
Sbjct: 276 ---QVTDFLSAATTTHI-SLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRL- 330
Query: 324 RNLIEVFNRDMDKDILVLLAARASRLE--NQDAIDAAI---INMLADPKEARANINEVHF 378
++I RD A + N D + I +N+L +P E R + +
Sbjct: 331 -SIIAESIRDG--------LATWDNWKHVNCDKLTTIIESSLNVL-EPAEYRKMFDRLSV 380
Query: 379 LPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRS 438
P + I W+ K ++N + L EK +
Sbjct: 381 FPPS-AH----IPTILLSLIWFDVIKSDVMVVVNKLHKY------------SLVEKQPKE 423
Query: 439 LAVAV--------QEVPEMTE------DSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKL 484
+++ ++ D P++F PP D + +
Sbjct: 424 STISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDS--DDLIPPYLD--QYFYSHI-- 477
Query: 485 GVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLL----LGRDKDENEALPVDELIEKADG 540
G HL + R ++ L L + K +++ + +
Sbjct: 478 --------GHHLKNIEHPER-----MTLFRMVFLDFRFLEQ-KIRHDSTAWNASGSILNT 523
Query: 541 FTDVFAEHKYE 551
+ Y+
Sbjct: 524 LQQL---KFYK 531
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* Length = 188 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 5e-05
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Query: 540 GFTDVF--AEHKYEIVKILQEKKHV----VGMTGDGVNDAPALKKADIGIAVAGATEAAR 593
G T ++ +K L EK + V GD + D P ++K + +AVA A
Sbjct: 91 GITHLYQGQSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLI 150
Query: 594 GAADIVLTEPG 604
AD V G
Sbjct: 151 PRADYVTRIAG 161
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 7e-05
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 544 VFAEHKYEIVKILQEKKHV----VGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIV 599
+F+ K E++ +LQ ++ + GDG ND K A I IA A E + A
Sbjct: 138 MFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHC 196
Query: 600 LTEPGLSVI 608
+ EP L++I
Sbjct: 197 INEPDLALI 205
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* Length = 164 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 8e-05
Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 6/71 (8%)
Query: 540 GFTDVF--AEHKYEIVKILQEKKHV----VGMTGDGVNDAPALKKADIGIAVAGATEAAR 593
+F K + L + + V GD +NDA LK+ I A A R
Sbjct: 69 KVDYLFQGVVDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIR 128
Query: 594 GAADIVLTEPG 604
+ I L + G
Sbjct: 129 RLSTIFLEKRG 139
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} Length = 162 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 1e-04
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 540 GFTDVF--AEHKYEIVKILQEKKHV----VGMTGDGVNDAPALKKADIGIAVAGATEAAR 593
G +++ + K EI + ++EK + +G GD V D +KK +AV A E R
Sbjct: 74 GVEEIYTGSYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVR 133
Query: 594 GAADIVLTEPG 604
A + G
Sbjct: 134 KVAVYITQRNG 144
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 1e-04
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Query: 544 VFAEHKYEIVKILQEKKHV----VGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIV 599
+ K EI++ + + + + GDG ND KKA + IA A + ADI
Sbjct: 139 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADIC 197
Query: 600 LTEPGLSVI 608
+ + L I
Sbjct: 198 IEKRDLREI 206
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 1e-04
Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 5/69 (7%)
Query: 544 VFAEHKYEIVKILQEKKHV----VGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIV 599
V A+ K +I+ L ++ V GDG ND + A +G+A A A
Sbjct: 241 VSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTA 299
Query: 600 LTEPGLSVI 608
+ GL +
Sbjct: 300 VRFAGLGGV 308
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} Length = 191 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Query: 540 GFTDVF--AEHKYEIVKILQEKKHV----VGMTGDGVNDAPALKKADIGIAVAGATEAAR 593
G T + K + L++ + GD + D P +++ +G+AV+ A
Sbjct: 84 GITHYYKGQVDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVL 143
Query: 594 GAADIVLTEPG 604
AD G
Sbjct: 144 EFADWRTERTG 154
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* Length = 180 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 1e-04
Identities = 19/71 (26%), Positives = 23/71 (32%), Gaps = 6/71 (8%)
Query: 540 GFTDVF--AEHKYEIVKILQEKKHV----VGMTGDGVNDAPALKKADIGIAVAGATEAAR 593
G F K L ++ V GD D PA AVA A +
Sbjct: 73 GIKLFFLGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVK 132
Query: 594 GAADIVLTEPG 604
A D VL+ G
Sbjct: 133 NAVDHVLSTHG 143
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} Length = 211 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 16/71 (22%), Positives = 23/71 (32%), Gaps = 6/71 (8%)
Query: 540 GFTDVF--AEHKYEIVKILQEKKHV----VGMTGDGVNDAPALKKADIGIAVAGATEAAR 593
G T ++ K L V GD + D P + + + +AVA A
Sbjct: 114 GITHLYQGQSDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLL 173
Query: 594 GAADIVLTEPG 604
A V G
Sbjct: 174 PKAHYVTRIKG 184
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} Length = 195 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 1e-04
Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 6/71 (8%)
Query: 540 GFTDVF--AEHKYEIVKILQEKKHV----VGMTGDGVNDAPALKKADIGIAVAGATEAAR 593
G + ++ + K + + +K + G GD + D P ++K + + VA
Sbjct: 90 GISLIYQGQDDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLA 149
Query: 594 GAADIVLTEPG 604
A+ V G
Sbjct: 150 QRANYVTHIKG 160
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A Length = 189 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 540 GFTDVF--AEHKYEIVKILQEKKHV----VGMTGDGVNDAPALKKADIGIAVAGATEAAR 593
G +F E K ++ L + + V GD + D P +++ +G+AVA A R
Sbjct: 84 GIEHLFQGREDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVR 143
Query: 594 GAADIVLTEPG 604
A + G
Sbjct: 144 EHAHGITRAQG 154
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Query: 544 VFAEHKYEIVKILQEKKHV----VGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIV 599
+ A +K + + L + ++ + GDG ND P L+ A GIA A R
Sbjct: 242 MNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQ 300
Query: 600 LTEPGLSVI 608
+ G ++
Sbjct: 301 INYHGFELL 309
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 2e-04
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 543 DVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA 584
+ K ++ L E + M GD V D A K +D+ A
Sbjct: 146 NQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA 187
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} Length = 168 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 2e-04
Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Query: 546 AEHKYEIVKILQEKKHV----VGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLT 601
K V +++ + V G+ V+D LK+ + A A A+ A +
Sbjct: 81 VSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICK 140
Query: 602 EPG 604
G
Sbjct: 141 CSG 143
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} Length = 176 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 4e-04
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 546 AEHKYEIVKILQEKKHV----VGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLT 601
+ K +K E++ + V G+ VND P +AVA A + RGAA V T
Sbjct: 84 IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTT 143
Query: 602 EPG 604
PG
Sbjct: 144 VPG 146
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 7e-04
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 567 GDGVNDAPALKKADIGIAVAGATEAARGAADIV 599
GD ND P + A AT+ + +D V
Sbjct: 176 GDSNNDMPMFQLPVRKACPANATDNIKAVSDFV 208
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 831 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 100.0 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.96 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.94 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.9 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.89 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.87 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.77 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.43 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.31 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.25 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.23 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.22 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.22 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.18 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 99.14 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.1 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.1 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.03 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.98 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.97 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.91 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.91 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.89 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.87 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.87 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.87 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.82 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.81 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.78 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.78 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.75 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.75 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.75 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.75 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.69 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.64 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.63 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.53 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.53 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.49 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.48 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.48 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.48 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.41 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.41 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.4 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 98.39 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.32 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.3 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.3 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.29 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.28 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.27 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.26 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.24 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.24 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.22 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.15 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.15 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.13 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.09 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.09 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.08 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.08 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.06 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.06 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.06 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.04 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.04 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.03 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.03 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.03 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.02 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.01 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.99 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.97 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.97 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.95 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.93 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 97.91 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.9 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.88 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.86 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.81 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.81 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.8 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.78 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.77 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.76 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 97.74 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.73 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.71 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.71 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.71 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.71 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.71 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.69 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.66 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.65 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.65 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.65 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.59 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.57 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.49 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.47 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.38 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.16 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.13 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.1 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.02 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.95 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.95 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.92 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 96.9 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 96.87 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.79 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.71 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.7 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.68 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.65 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.65 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.53 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.48 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.43 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.4 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.23 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.17 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.83 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.82 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 95.37 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 95.32 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 95.25 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 95.17 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 94.5 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 94.49 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 94.17 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 93.99 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 93.37 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 93.35 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 92.4 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 90.58 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 89.34 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 89.25 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 88.86 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 85.37 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 83.22 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 82.5 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 80.82 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 80.78 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 80.25 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-131 Score=1189.99 Aligned_cols=820 Identities=71% Similarity=1.118 Sum_probs=685.5
Q ss_pred CCcccCCCCCccccCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 003313 11 DPENCNCGGIDLARLPLDEVFGQLGTTRQGLSSEDAEVRLKFFGSNKLEKKPENKFLKFLSFMWNPLSWVMETAALMAIA 90 (831)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~l~i~ail~~~ 90 (831)
.+|+...+..|+|.+|.+|+++.|+++.+|||++|+++|+++||+|+++.++++.|+.|+++|++|+.++|+++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~il~~aaiis~~ 82 (885)
T 3b8c_A 3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEMAAIMAIA 82 (885)
T ss_dssp ---------CCCSSSSTTCCTTTSSSCSSCSTHHHHHHHSSSCCSCCTTTTCCCTTSSTTSCCCGGGSSHHHHHHHGGGG
T ss_pred chhhhhhcchhhHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35555556678999999999999999989999999999999999999999888889999999999999999999999998
Q ss_pred HhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCcc
Q 003313 91 LANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVI 170 (831)
Q Consensus 91 ~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~i 170 (831)
++...+...+|.+++.|+++++++..+++++++|+++++++|+++.+++++|+|||++++|++++|||||+|.|++||+|
T Consensus 83 l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~I 162 (885)
T 3b8c_A 83 LANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDII 162 (885)
T ss_dssp SSCCTTSCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCC
T ss_pred HHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEE
Confidence 76544445589999988888999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEecCCeEEEcccccCCCccccccCCCeeeecceeee-----------ccchhhhHHHhhhccCccCcHHHHHHH
Q 003313 171 PADARLLEGDPLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTEVVGHFQQVLTS 239 (831)
Q Consensus 171 PaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~~~~~l~~~~~~ 239 (831)
||||+|++|+++.||||+|||||.|+.|.+||.+|+||.+.+ .+|.+|++.+++++...++++|+.+++
T Consensus 163 PaDg~ll~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~lq~~~~~ 242 (885)
T 3b8c_A 163 PADARLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 242 (885)
T ss_dssp SSCCCCCCSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCSCSCCSTTTTTTHH
T ss_pred eeceEEEEcCcccccccccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhcccccChHHHHHHH
Confidence 999999999778999999999999999999999999999887 789999999988876788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhchhhHhhH----HH------------HHHHHHHHHHHhhhcCceEEccchhhhhhcC
Q 003313 240 IGNFCICFITVGMILEIIVMFPIQHRLYRDR----IN------------MLSVTLAIASYRLSQRGAITKRMTAIEEMAR 303 (831)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~------------~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~ 303 (831)
++++++..+++++++.+++.+......+... +. ++++++++++.||+|+|++||+++++|+||+
T Consensus 243 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~ 322 (885)
T 3b8c_A 243 IGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 322 (885)
T ss_dssp HHHHHHHHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhC
Confidence 9887544333322222222222222222222 11 5677788999999999999999999999999
Q ss_pred ceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhccceeEEecCCC
Q 003313 304 MDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNP 383 (831)
Q Consensus 304 v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~f~s 383 (831)
+++||||||||||+|+|+|.+..+..+..+.++++++.++++++...++||++.|+++++.++.+.+..++.++.+||+|
T Consensus 323 v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~pF~s 402 (885)
T 3b8c_A 323 MDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNP 402 (885)
T ss_dssp CCCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCCTTCCCCSSCCBCCCCCCT
T ss_pred CCEEEECCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhchhhHhhcCceeecccCCc
Confidence 99999999999999999997543223344567888888888888765679999999998876555556788899999999
Q ss_pred CCceEEEEEEcCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeee
Q 003313 384 VDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGL 463 (831)
Q Consensus 384 ~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~ 463 (831)
.+|+|++++++.+|+.+.++|||||.++++|..+++.++++.+.+++++++|+|++++|++++++.+.+..|++++|+|+
T Consensus 403 ~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGl 482 (885)
T 3b8c_A 403 VDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGL 482 (885)
T ss_dssp TTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEE
T ss_pred ccceEEEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEE
Confidence 99999998877678878899999999999998655667778888999999999999999999887667778899999999
Q ss_pred ccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCC-CCcccHHHHHHhcCcEE
Q 003313 464 LPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDE-NEALPVDELIEKADGFT 542 (831)
Q Consensus 464 i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~ 542 (831)
++++||+|||++++|++|+++||+++|+|||++.+|.++|+++||..+..+...+.|.+.+. .++.++++.+++.++|+
T Consensus 483 i~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~a 562 (885)
T 3b8c_A 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFA 562 (885)
T ss_dssp EEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEE
T ss_pred EEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEE
Confidence 99999999999999999999999999999999999999999999976555566777777665 67778899999999999
Q ss_pred EeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHH
Q 003313 543 DVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIM 622 (831)
Q Consensus 543 ~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i 622 (831)
|++|+||.++|+.+|++|+.|+|+|||+||+|||++||||||||+|+|+||++||+|+.+++|++|++++++||++|+||
T Consensus 563 rv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni 642 (885)
T 3b8c_A 563 GVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRM 642 (885)
T ss_dssp CCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHH
T ss_pred EECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCCccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHhhccchhccccCCCCCCCCCCccchHHHHHHHHHHHHHHHH
Q 003313 623 KNCMIHAVSITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRVKSSLRPDGWKLNEIFAAGIVIGNYLAL 702 (831)
Q Consensus 623 ~~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 702 (831)
+|++.|++++|+..++.+++..++++++++|+|++|+++++|++++++++++.+|+++|++|..++++..+++.|+++++
T Consensus 643 ~~~i~~~l~~n~~~~~~~~~~~~~~~~~l~p~~il~i~l~~d~~~l~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~ 722 (885)
T 3b8c_A 643 KNYTIYAVSITIRIVFGFMLIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAI 722 (885)
T ss_dssp HHHHHHHHHHTTTTTSTTHHHHSSCSSCSCHHHHHHHHHHHHTTTCCCCCCCCCCSSCCCSTTTTTTTTTHHHHHSSTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcCcCHHHHHHHHHHHHHHHHhhcccccCcccCCcchhHHHHHHHHHHHHHHHHH
Confidence 99999999999866555555566778899999999999999999899999999998889999888888888888999999
Q ss_pred HHHHHHHHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCcCchHHHHHHHHHHHHHHHHHH
Q 003313 703 VTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVLAQLVATLIA 782 (831)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 782 (831)
+++.+|++++..++++..++.........+.+|+.|+...++.++++|++|++++++++++++++++++++..++.+++.
T Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~Rs~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (885)
T 3b8c_A 723 MTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVERPGALLMIAFLIAQLIATLIA 802 (885)
T ss_dssp HHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGGGTTCSSSCTTTSTTSTTTTTSGGGSSTTTTTTSSS
T ss_pred HHHHHHHHHHHcCccccccCcccccchHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccCccHHHHHHHHHHHHHHHHHH
Confidence 88877765544333333334321111134566766665555555688999999888888887666655555444444444
Q ss_pred HhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccccccC
Q 003313 783 VYAHISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVR-TLSREAWN 830 (831)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~k~~~r-~~~~~~w~ 830 (831)
.|.++.++.+.+++|.||+++++++++++++.|+.|++.| .+...+|+
T Consensus 803 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~~~~~~~ 851 (885)
T 3b8c_A 803 VYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYILSGKAWL 851 (885)
T ss_dssp SSCCCCSSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTTC-------
T ss_pred HhccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccHh
Confidence 5544455568899999999999999999999999999988 77778886
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-121 Score=1103.34 Aligned_cols=790 Identities=34% Similarity=0.541 Sum_probs=652.6
Q ss_pred CcCCCCCCCCcccCCCCCcccc-----CCHHH-HHHHhCCC-CCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHh
Q 003313 3 EDLEKPLLDPENCNCGGIDLAR-----LPLDE-VFGQLGTT-RQGLSSEDAEVRLKFFGSNKLEKKPENKFLKFLSFMWN 75 (831)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~l~~~-~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~ 75 (831)
||+|+++++++..|++..+... .+.+. +.+.|+++ .+|||++|+++|+++||+|+++.++++.|..|+++|++
T Consensus 43 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~ea~~r~~~~G~N~l~~~~~~~~~~~l~~f~~ 122 (920)
T 1mhs_A 43 EDIDALIEDLESHDGHDAEEEEEEATPGGGRVVPEDMLQTDTRVGLTSEEVVQRRRKYGLNQMKEEKENHFLKFLGFFVG 122 (920)
T ss_dssp HHHHHHHHHHSSCCCCCCSSSCCCSHHHHHSCCSSTTTTTCCCCCCCSHHHHHHHHHTSSSSCCCCCCSSHHHHTHHHHH
T ss_pred cCHHHHHHHHhhhcccccccchhhhhcCccchhHHHHhCCCcCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHH
Confidence 5677777777766655443211 12322 34457776 68999999999999999999998888999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCC
Q 003313 76 PLSWVMETAALMAIALANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAV 155 (831)
Q Consensus 76 ~~~~~l~i~ail~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~ 155 (831)
|+.++++++++++++++ +|.++++++++++++.+++++|++|+++++++|+++.+++++|+|||++++|++++
T Consensus 123 ~~~~ll~~aai~s~~~g-------~~~~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~e 195 (920)
T 1mhs_A 123 PIQFVMEGAAVLAAGLE-------DWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPE 195 (920)
T ss_dssp HHHHHHHHHHHHCTTCS-------CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECSSSEEECCTTT
T ss_pred HHHHHHHHHHHHHHHHH-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEECCEEEEEEHHH
Confidence 99999999999998864 78888888888999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEEcCCCccccceEEEecCC-eEEEcccccCCCccccccCCCeeeecceeee-----------ccchhhhHHHh
Q 003313 156 LVPGDIISIKFGDVIPADARLLEGDP-LKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADL 223 (831)
Q Consensus 156 lv~GDiI~l~~G~~iPaDg~ll~g~~-~~Vdes~LTGEs~pv~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~ 223 (831)
|||||+|.|++||+|||||+|++|++ +.||||+|||||.|+.|.+||.+|+||.+.+ .+|.+|++.++
T Consensus 196 Lv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES~LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~l 275 (920)
T 1mhs_A 196 VVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAAL 275 (920)
T ss_dssp SCTTSEEEECTTCBCSSEEEEEEESSCCEEBCTTTSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSS
T ss_pred cCCCCEEEeCCCCccccceEEEecCceeeeeccccCCCCcceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHH
Confidence 99999999999999999999999974 8999999999999999999999999998876 78999999999
Q ss_pred hhccC-ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHhhHH----H------------HHHHHHHHHHHhhh
Q 003313 224 VDSTE-VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRI----N------------MLSVTLAIASYRLS 286 (831)
Q Consensus 224 ~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~------------~l~~~l~~~~~~l~ 286 (831)
++++. .++++++.+++++++++.++++.+++.++.++ .....+...+ . ++++++++++.+|+
T Consensus 276 v~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~-~~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~ma 354 (920)
T 1mhs_A 276 VNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSF-YRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLA 354 (920)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-TTTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred HhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHH
Confidence 88775 68999999999998765544443333222221 1122222211 1 46777889999999
Q ss_pred cCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCC--ChHHHHHHHHhC
Q 003313 287 QRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQ--DAIDAAIINMLA 364 (831)
Q Consensus 287 ~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~--~~~~~ai~~~~~ 364 (831)
|+|+++|+++++|+||++++||||||||||+|+|+|.+++. ..+.++++++..++.++...+. ||+|.|+++++.
T Consensus 355 k~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~---~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~ 431 (920)
T 1mhs_A 355 KKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYT---VAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLK 431 (920)
T ss_dssp HTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBC---CSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHH
T ss_pred hCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEee---cCCCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999988653 2344555666666655443333 999999998753
Q ss_pred C---hHHHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccC----chhhHHHHHHHHHHHHhccCe
Q 003313 365 D---PKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQE----KEEIGGKVHEIINKLAEKGLR 437 (831)
Q Consensus 365 ~---~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~----~~~~~~~~~~~~~~~~~~G~r 437 (831)
. .......++.++.+||+|.+|+|+++++..+|+.+.++|||||.++++|.. +++.++.+.+.+++++++|+|
T Consensus 432 ~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~R 511 (920)
T 1mhs_A 432 YYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFR 511 (920)
T ss_dssp HSSSCCGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCC
T ss_pred hcccchhhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCE
Confidence 2 112345678899999999999999998877788889999999999999975 234566788889999999999
Q ss_pred eeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCC--
Q 003313 438 SLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPS-- 515 (831)
Q Consensus 438 ~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~-- 515 (831)
++++|++. .|++++|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|+++||..+..+.
T Consensus 512 vL~vA~~~--------~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~ 583 (920)
T 1mhs_A 512 SLGVARKR--------GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAER 583 (920)
T ss_dssp CCEECCCS--------SSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSS
T ss_pred EEEEEEec--------cccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccc
Confidence 99999984 15788999999999999999999999999999999999999999999999999997432221
Q ss_pred ccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhh
Q 003313 516 SLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGA 595 (831)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~a 595 (831)
..+.|. +.++++++.+.+++..+|+|++|+||.++|+.+|++|+.|+|+|||+||+|||++||||||||+|+|++|++
T Consensus 584 ~~~~g~--~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~a 661 (920)
T 1mhs_A 584 LGLGGG--GDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSA 661 (920)
T ss_dssp SSSCBC--CCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHHHHHS
T ss_pred eeecCc--ccCCHHHHHHHHhhCeEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccccccHHHHHh
Confidence 223333 455677788888888999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHhhccchhccccCCC
Q 003313 596 ADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLLALIWEYDFPPFMVLIIAVLNDGTIITISKGRV 675 (831)
Q Consensus 596 adivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~ 675 (831)
||+|+++++|++|++++++||++|+||+|++.|.++.|+.....+......++++++|++++|+++++|++++++++++.
T Consensus 662 ADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~l~~~~il~~~l~~d~~~lal~~e~~ 741 (920)
T 1mhs_A 662 ADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNA 741 (920)
T ss_dssp SSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCCHHHHHHHHHHHTTHHHHCCCCCS
T ss_pred cCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHhhhhcccCc
Confidence 99999999999999999999999999999999999999865433333344556779999999999999998899999988
Q ss_pred CCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHHHHHhhhhccC
Q 003313 676 KSSLRPDGWKLNEIFAAGIVIGNYLALVTILFYWVVVHTDFFETHFHVRSLSSNTEEISSAVHLQVSIISQALIFVTRSQ 755 (831)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~ 755 (831)
++.++|++|+.++++..+++.|+++++.++..|++.+..+ ...+. .....+.+|++|++++++++++++++|+.
T Consensus 742 ~~~~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~T~~f~~lv~~~~~~~~~~R~~ 815 (920)
T 1mhs_A 742 PYSQTPVKWNLPKLWGMSVLLGVVLAVGTWITVTTMYAQG---ENGGI---VQNFGNMDEVLFLQISLTENWLIFITRAN 815 (920)
T ss_dssp GGGGSCCCCCSSSCSSCHHHHHHHHHHHHHHHHHHHTTTT---TTCCS---SSSSSSHHHHHHHHHHHHHHHHTTSSSCS
T ss_pred ccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccccc---cchhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 7777788888777777777889888888876665443210 00110 01123478999999999999999999998
Q ss_pred CCCCCcCchHHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003313 756 SWSFLERPGALLMCAFVLAQLVATLIAVYAHISFAYISGIGWGWAGVIWLYSLVFYILLDIIKFTVR 822 (831)
Q Consensus 756 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~k~~~r 822 (831)
+++|.+.+++++++++++.+++.+++ .| +++|.+.+++|.+|+.+|+++++++++.|+.|++.+
T Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~ 879 (920)
T 1mhs_A 816 GPFWSSIPSWQLSGAIFLVDILATCF-TI--WGWFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQ 879 (920)
T ss_dssp SSCSCCSCTHHHHHHHHHHHHHHHHH-HS--SSSTTSCSHHHHTHHHHHHHTTHHHHHHHHHHHCCC
T ss_pred hhhhcCchHHHHHHHHHHHHHHHHHH-HH--hhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 87666667777777777776665555 34 336778899999999999999999999999998654
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-115 Score=1083.94 Aligned_cols=818 Identities=23% Similarity=0.330 Sum_probs=651.5
Q ss_pred CCcccCCC-CCccccCCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCccCCCC-CcHHHHHHHHHHhHHHHHHHHHHHH
Q 003313 11 DPENCNCG-GIDLARLPLDEVFGQLGTT-RQGLSSEDAEVRLKFFGSNKLEKKP-ENKFLKFLSFMWNPLSWVMETAALM 87 (831)
Q Consensus 11 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GLs~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~i~ail 87 (831)
++|+++++ +++||.+|.+|+++.|+++ .+|||++|+++|+++||+|+++.++ .+.|+.|++||++|+.+++++++++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~ 120 (1034)
T 3ixz_A 41 KLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAI 120 (1034)
T ss_pred hHHHHhhhcCcchhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHH
Confidence 44455554 5689999999999999999 5899999999999999999998765 5789999999999999999999999
Q ss_pred HHHHhc---CC---CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcE
Q 003313 88 AIALAN---GG---GQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDI 161 (831)
Q Consensus 88 ~~~~~~---~~---~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDi 161 (831)
+++... .. .....|+++++|+++++++++++++||+|+++++++|+++.+++++|+|||++++|++++|||||+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDi 200 (1034)
T 3ixz_A 121 CLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDL 200 (1034)
T ss_pred HHHHHHHhhccCCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcE
Confidence 887541 11 112357788888999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCccccceEEEecCCeEEEcccccCCCccccccCC----------Ceeeecceeee-----------ccchhhhH
Q 003313 162 ISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETG----------DEVFSGLTCKH-----------VHSFFGKA 220 (831)
Q Consensus 162 I~l~~G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g----------~~v~aGt~v~~-----------~~t~~g~~ 220 (831)
|.|++||+|||||+|++|+++.||||+|||||.|+.|.++ +.+|+||.+.+ .+|.+|++
T Consensus 201 V~l~~Gd~VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI 280 (1034)
T 3ixz_A 201 VEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRI 280 (1034)
T ss_pred EEEcCCceecCCeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHH
Confidence 9999999999999999998899999999999999999765 56899999887 78999999
Q ss_pred HHhhhccC-ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHhhHH---------------H-HHHHHHHHHHH
Q 003313 221 ADLVDSTE-VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDRI---------------N-MLSVTLAIASY 283 (831)
Q Consensus 221 ~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---------------~-~l~~~l~~~~~ 283 (831)
.+++.+.+ .++|+++.++++++++..++++..++.+++.+ .....+...+ + ++++++++++.
T Consensus 281 ~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~ 359 (1034)
T 3ixz_A 281 ASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAM-CIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAK 359 (1034)
T ss_pred HHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcchHHHHHHHHHHHHHheeccccHHHHHHHHHHHHH
Confidence 99888764 78999999999988754433332222222221 1122222111 1 56778899999
Q ss_pred hhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCC--------------C--ChHHHHHHHHHhc
Q 003313 284 RLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRD--------------M--DKDILVLLAARAS 347 (831)
Q Consensus 284 ~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~--------------~--~~~~~l~~a~~~~ 347 (831)
||+|+|++||+++++|+||++++||||||||||+|+|+|.++++...... . ....++..++.|+
T Consensus 360 rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~ 439 (1034)
T 3ixz_A 360 RLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCN 439 (1034)
T ss_pred HHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999875321100 0 0124455555543
Q ss_pred cc---------------cCCChHHHHHHHHhC----ChHHHhhccceeEEecCCCCCceEEEEEEcC---CCcEEEEEcc
Q 003313 348 RL---------------ENQDAIDAAIINMLA----DPKEARANINEVHFLPFNPVDKRTAITYTDS---EGNWYRASKG 405 (831)
Q Consensus 348 ~~---------------~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~---~g~~~~~~kG 405 (831)
.. ..+||.|.|++.++. +....+..++.++.+||+|.+|+|++++... +|++++++||
T Consensus 440 ~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KG 519 (1034)
T 3ixz_A 440 RAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKG 519 (1034)
T ss_pred cceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeC
Confidence 21 124889999988763 3444567889999999999999998877643 3678999999
Q ss_pred chHHHhhhccC----------chhhHHHHHHHHHHHHhccCeeeeeeeecCCCCC-----------CCCCCCCceeeeec
Q 003313 406 APEQILNMCQE----------KEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMT-----------EDSPGGPRSFCGLL 464 (831)
Q Consensus 406 a~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~-----------~~~~e~~l~~lG~i 464 (831)
|||.|+++|.. +++.++.+.+..++++++|+||+++|++.+++.+ .+..|+||+|+|++
T Consensus 520 Ape~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv 599 (1034)
T 3ixz_A 520 APERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLV 599 (1034)
T ss_pred ChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEEE
Confidence 99999999963 3455677888999999999999999999876432 12357899999999
Q ss_pred cccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC----------------------CCccccCCc
Q 003313 465 PLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY----------------------PSSLLLGRD 522 (831)
Q Consensus 465 ~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~----------------------~~~~~~~~~ 522 (831)
+++||+|++++++|++|+++||+++|+|||+..+|.++|+++|+..+.. ...++.|.+
T Consensus 600 ~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 679 (1034)
T 3ixz_A 600 SMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQ 679 (1034)
T ss_pred eccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHh
Confidence 9999999999999999999999999999999999999999999964311 112455556
Q ss_pred CCCCCcccHHHHHHhcC--cEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEec-CchHHHhhhcCEE
Q 003313 523 KDENEALPVDELIEKAD--GFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-GATEAARGAADIV 599 (831)
Q Consensus 523 ~~~~~~~~~~~~~~~~~--v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~-~~~~~a~~aadiv 599 (831)
++..+++++.+.+.+.. +|+|++|+||.++++.+|+.|++|+|+|||.||+|||++||+||||| +|+|++|++||+|
T Consensus 680 l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~V 759 (1034)
T 3ixz_A 680 LKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMI 759 (1034)
T ss_pred hhhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEE
Confidence 66666777777777664 89999999999999999999999999999999999999999999999 9999999999999
Q ss_pred EeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhccCCCChHHHHHHHHhhccc-hhccccCCCCC
Q 003313 600 LTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLL-ALIWEYDFPPFMVLIIAVLNDGT-IITISKGRVKS 677 (831)
Q Consensus 600 l~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~ 677 (831)
+.++|+++|+.++++||++|+|++|++.|.+++|+..++..+++ ++..+.|++|+|++|+|+++|++ +++++++++++
T Consensus 760 l~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~~~~ 839 (1034)
T 3ixz_A 760 LLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAES 839 (1034)
T ss_pred eccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCCh
Confidence 99999999999999999999999999999999999766655554 44567899999999999999985 79999998876
Q ss_pred C---CCCCcc-----chHHHHHH-HHHHHHHHHHHHHHHHHHHHh-hhcccc-ccccc---------cCCC---------
Q 003313 678 S---LRPDGW-----KLNEIFAA-GIVIGNYLALVTILFYWVVVH-TDFFET-HFHVR---------SLSS--------- 728 (831)
Q Consensus 678 ~---~~~~~~-----~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~-~~~~~~-~~~~~---------~~~~--------- 728 (831)
. ++|+++ ..++++.+ ++..|+++++.+++.|++.+. .++.+. .+|.. +...
T Consensus 840 ~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (1034)
T 3ixz_A 840 DIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFG 919 (1034)
T ss_pred hhhhCCCCCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchh
Confidence 4 223222 22344444 445688888888876665543 222211 01110 0000
Q ss_pred ----cHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCc---CchHHHHHHHHHHHHHHHHHHHhhh--cccccccchhHHH
Q 003313 729 ----NTEEISSAVHLQVSIISQALIFVTRSQSWSFLE---RPGALLMCAFVLAQLVATLIAVYAH--ISFAYISGIGWGW 799 (831)
Q Consensus 729 ----~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 799 (831)
....++|++|.+++++|+++++++|+++.+.+. ..|+++++++++.+++..++ .|.+ ...|.+.|++|.+
T Consensus 920 ~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~~ 998 (1034)
T 3ixz_A 920 QRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFL-CYCPGMPNIFNFMPIRFQW 998 (1034)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCCcccccCCcccHHHHHHHHHHHHHHHHH-HHhhhHHHHhcCCCCCHHH
Confidence 012378999999999999999999997644322 23446666666665554443 4444 3467788899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccC
Q 003313 800 AGVIWLYSLVFYILLDIIKFTVRTLSREAWN 830 (831)
Q Consensus 800 ~~~~~~~~~~~~~~~e~~k~~~r~~~~~~w~ 830 (831)
|++++++++++++++|+.|++.|.+++..|.
T Consensus 999 w~~~~~~~~~~~~~~e~~K~~~r~~~~~~~~ 1029 (1034)
T 3ixz_A 999 WLVPMPFGLLIFVYDEIRKLGVRCCPGSWWD 1029 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChhh
Confidence 9999999999999999999999976554444
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-115 Score=1077.10 Aligned_cols=811 Identities=22% Similarity=0.339 Sum_probs=650.2
Q ss_pred CcccCC-CCCccccCCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCccCCC-CCcHHHHHHHHHHhHHHHHHHHHHHHH
Q 003313 12 PENCNC-GGIDLARLPLDEVFGQLGTT-RQGLSSEDAEVRLKFFGSNKLEKK-PENKFLKFLSFMWNPLSWVMETAALMA 88 (831)
Q Consensus 12 ~~~~~~-~~~~~~~~~~~~~~~~l~~~-~~GLs~~~~~~r~~~~G~N~i~~~-~~~~~~~~~~~~~~~~~~~l~i~ail~ 88 (831)
++++++ .+++||.++++++++.|+++ .+|||++|+++|+++||+|+++.+ +.+.|+.|+++|++|++++|+++++++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls 116 (1028)
T 2zxe_A 37 LDELKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILC 116 (1028)
T ss_dssp CCTTTTSCCCCCSSSCHHHHHHHHTCCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHH
T ss_pred HHHHhhhcCcchhhCCHHHHHHHhCcCccCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 444433 45789999999999999998 689999999999999999999986 478899999999999999999999999
Q ss_pred HHHhc-----CC-CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEE
Q 003313 89 IALAN-----GG-GQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDII 162 (831)
Q Consensus 89 ~~~~~-----~~-~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI 162 (831)
++++. +. ....+|+++++++++++++.+++++|++|+++++++|+++.+++++|+|||++++|++++|||||+|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV 196 (1028)
T 2zxe_A 117 FLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLV 196 (1028)
T ss_dssp HHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEE
T ss_pred HHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEE
Confidence 87641 11 1123577888889999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCccccceEEEecCCeEEEcccccCCCccccccCCC----------eeeecceeee-----------ccchhhhHH
Q 003313 163 SIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETGD----------EVFSGLTCKH-----------VHSFFGKAA 221 (831)
Q Consensus 163 ~l~~G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g~----------~v~aGt~v~~-----------~~t~~g~~~ 221 (831)
.|++||+|||||+|++|+++.||||+|||||.|+.|.+++ .+|+||.+.+ .+|.+|++.
T Consensus 197 ~l~~Gd~IPaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~ 276 (1028)
T 2zxe_A 197 EVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIA 276 (1028)
T ss_dssp EEETTCBCCSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHH
T ss_pred EECCCCEeeceEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHH
Confidence 9999999999999999977899999999999999999876 5999999887 789999999
Q ss_pred HhhhccC-ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHhhH---------------HH-HHHHHHHHHHHh
Q 003313 222 DLVDSTE-VVGHFQQVLTSIGNFCICFITVGMILEIIVMFPIQHRLYRDR---------------IN-MLSVTLAIASYR 284 (831)
Q Consensus 222 ~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------l~-~l~~~l~~~~~~ 284 (831)
+++..++ +++|+|+.+++++.++..+.++.+++.+++.+. ....+... ++ .+++++++++.|
T Consensus 277 ~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~ 355 (1028)
T 2zxe_A 277 TLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLI-LGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKR 355 (1028)
T ss_dssp HHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHH
T ss_pred HhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHH
Confidence 9988764 789999999999887554443322222222221 11122211 11 466778889999
Q ss_pred hhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeec--C-CC-----------CCh--HHHHHHHHHhcc
Q 003313 285 LSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVF--N-RD-----------MDK--DILVLLAARASR 348 (831)
Q Consensus 285 l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~--~-~~-----------~~~--~~~l~~a~~~~~ 348 (831)
|+|+|++||+++++|+||++++||||||||||+|+|+|.++..... . .+ .++ +.++..++.|+.
T Consensus 356 mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~ 435 (1028)
T 2zxe_A 356 MARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNR 435 (1028)
T ss_dssp HHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCC
T ss_pred HhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999865210 0 00 011 245666666532
Q ss_pred c---------------cCCChHHHHHHHHhC----ChHHHhhccceeEEecCCCCCceEEEEEEcC---CCcEEEEEccc
Q 003313 349 L---------------ENQDAIDAAIINMLA----DPKEARANINEVHFLPFNPVDKRTAITYTDS---EGNWYRASKGA 406 (831)
Q Consensus 349 ~---------------~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~---~g~~~~~~kGa 406 (831)
. ..+||.|.|+++++. +....+..++.++.+||+|.+|||+++++.. +|+++.++|||
T Consensus 436 ~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA 515 (1028)
T 2zxe_A 436 AVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGA 515 (1028)
T ss_dssp CEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEEC
T ss_pred CeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCC
Confidence 1 125889999998764 3334566789999999999999999999863 57788999999
Q ss_pred hHHHhhhccC----------chhhHHHHHHHHHHHHhccCeeeeeeeecCCCCC-----------CCCCCCCceeeeecc
Q 003313 407 PEQILNMCQE----------KEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMT-----------EDSPGGPRSFCGLLP 465 (831)
Q Consensus 407 ~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~-----------~~~~e~~l~~lG~i~ 465 (831)
||.|+++|.. +++.++.+.+..++++++|+||+++|++.+++.+ .+..|+|++|+|+++
T Consensus 516 ~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~ 595 (1028)
T 2zxe_A 516 PERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMA 595 (1028)
T ss_dssp HHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEE
T ss_pred cHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeec
Confidence 9999999963 2345677888899999999999999999876431 123478999999999
Q ss_pred ccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCC----------------------CccccCCcC
Q 003313 466 LFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYP----------------------SSLLLGRDK 523 (831)
Q Consensus 466 ~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~----------------------~~~~~~~~~ 523 (831)
++||+|++++++|++|+++||+++|+|||++.+|.++|+++||..+... ..++.|.++
T Consensus 596 i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l 675 (1028)
T 2zxe_A 596 MIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDL 675 (1028)
T ss_dssp EECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHH
T ss_pred cCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHh
Confidence 9999999999999999999999999999999999999999999743110 124455566
Q ss_pred CCCCcccHHHHHHhcC--cEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEec-CchHHHhhhcCEEE
Q 003313 524 DENEALPVDELIEKAD--GFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-GATEAARGAADIVL 600 (831)
Q Consensus 524 ~~~~~~~~~~~~~~~~--v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~-~~~~~a~~aadivl 600 (831)
+...++++++++.++. +|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||++|||||||| +|+|++|++||+|+
T Consensus 676 ~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl 755 (1028)
T 2zxe_A 676 KDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMIL 755 (1028)
T ss_dssp TTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEE
T ss_pred hhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEe
Confidence 6667777888888876 99999999999999999999999999999999999999999999999 79999999999999
Q ss_pred eCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhccCCCChHHHHHHHHhhccc-hhccccCCCCCC
Q 003313 601 TEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLL-ALIWEYDFPPFMVLIIAVLNDGT-IITISKGRVKSS 678 (831)
Q Consensus 601 ~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~ 678 (831)
.++++++|++++++||++|+|+++++.|.+++|+..++..+.+ .+..+.+++|+|++|+|+++|++ +++++++++++.
T Consensus 756 ~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~~~ 835 (1028)
T 2zxe_A 756 LDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESD 835 (1028)
T ss_dssp TTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCSSC
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccchh
Confidence 9999999999999999999999999999999999766655554 34567899999999999999975 689999987653
Q ss_pred ---CCCCcc-----chHHHHHH-HHHHHHHHHHHHHHHHHHHHhh-hcccc--------cccc--ccC----CC------
Q 003313 679 ---LRPDGW-----KLNEIFAA-GIVIGNYLALVTILFYWVVVHT-DFFET--------HFHV--RSL----SS------ 728 (831)
Q Consensus 679 ---~~~~~~-----~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~-~~~~~--------~~~~--~~~----~~------ 728 (831)
++|+++ ..++.+.+ ++..|+++++++|+.|++.+.. ++.+. ++.. ... ..
T Consensus 836 ~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (1028)
T 2zxe_A 836 IMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQ 915 (1028)
T ss_dssp GGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHH
T ss_pred hhccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccchhh
Confidence 223322 22344444 4577999998888766654322 22110 0000 000 00
Q ss_pred ---cHHHHHHHHHHHHHHHHHHHhhhhccCCCCCC--cCchHHHHHHHHHHHHHHHHHHHhhh--cccccccchhHHHHH
Q 003313 729 ---NTEEISSAVHLQVSIISQALIFVTRSQSWSFL--ERPGALLMCAFVLAQLVATLIAVYAH--ISFAYISGIGWGWAG 801 (831)
Q Consensus 729 ---~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 801 (831)
...+.+|++|++++++|+++++++|+++.+++ ..+|+++++++++.+++..++ .|.+ ..+|.+.+++|.+|+
T Consensus 916 ~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~~w~ 994 (1028)
T 2zxe_A 916 RKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFL-SYCPGTDVALRMYPLKPSWWF 994 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHH-HHSTTHHHHTCCCCCCGGGGG
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHH-HHhhhHHhhhcCCCCCHHHHH
Confidence 01357899999999999999999999775432 234556766776666555444 4543 345678888898888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Q 003313 802 VIWLYSLVFYILLDIIKFTVRTL 824 (831)
Q Consensus 802 ~~~~~~~~~~~~~e~~k~~~r~~ 824 (831)
++++++++++++.|+.|++.|.+
T Consensus 995 ~~~~~~~~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 995 CAFPYSLIIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcc
Confidence 88889999999999999988854
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-111 Score=1045.99 Aligned_cols=802 Identities=25% Similarity=0.323 Sum_probs=638.3
Q ss_pred ccccCCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCccCCCC-CcHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC---
Q 003313 21 DLARLPLDEVFGQLGTT-RQGLSSEDAEVRLKFFGSNKLEKKP-ENKFLKFLSFMWNPLSWVMETAALMAIALANGG--- 95 (831)
Q Consensus 21 ~~~~~~~~~~~~~l~~~-~~GLs~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~i~ail~~~~~~~~--- 95 (831)
+||.++++|+++.|+++ .+|||++|+++|+++||+|+++.++ +++|+.+++||++|+++++++++++++++....
T Consensus 4 ~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~ 83 (995)
T 3ar4_A 4 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 83 (995)
T ss_dssp TGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred hhhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 58999999999999998 6799999999999999999999865 688999999999999999999999999876322
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCE--EEEEeCCCcCCCcEEEEcCCCccccc
Q 003313 96 GQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQ--WKEQDAAVLVPGDIISIKFGDVIPAD 173 (831)
Q Consensus 96 ~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~--~~~i~~~~lv~GDiI~l~~G~~iPaD 173 (831)
+....|.++++++++++++..+++++|+|+++++++|+++.+++++|+|||+ .++|++++|||||+|.|++||+||||
T Consensus 84 ~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD 163 (995)
T 3ar4_A 84 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPAD 163 (995)
T ss_dssp GGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSE
T ss_pred cchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCccccc
Confidence 1123788889888899999999999999999999999999999999999987 69999999999999999999999999
Q ss_pred eEEEe--cCCeEEEcccccCCCccccccCC-------------Ceeeecceeee-----------ccchhhhHHHhhhcc
Q 003313 174 ARLLE--GDPLKIDQSELTGESLTVTKETG-------------DEVFSGLTCKH-----------VHSFFGKAADLVDST 227 (831)
Q Consensus 174 g~ll~--g~~~~Vdes~LTGEs~pv~K~~g-------------~~v~aGt~v~~-----------~~t~~g~~~~~~~~~ 227 (831)
|+|++ +.++.||||+|||||.|+.|.++ +.+|+||.+.+ .+|.+|++.+++.++
T Consensus 164 ~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 243 (995)
T 3ar4_A 164 IRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAAT 243 (995)
T ss_dssp EEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHTC
T ss_pred EEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhcC
Confidence 99964 44689999999999999999987 68999999887 789999999999876
Q ss_pred C-ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-h----chhhH--------hhHHH------------HHHHHHHHH
Q 003313 228 E-VVGHFQQVLTSIGNFCICFITVGMILEIIVMFP-I----QHRLY--------RDRIN------------MLSVTLAIA 281 (831)
Q Consensus 228 ~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~--------~~~l~------------~l~~~l~~~ 281 (831)
+ +++|+|+.++++++++..++++.+++.+++... . ....| ..++. +++++++++
T Consensus 244 ~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~ 323 (995)
T 3ar4_A 244 EQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALG 323 (995)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHH
Confidence 4 789999999999987655443333332322211 1 01111 11111 456778889
Q ss_pred HHhhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeec--C------------CCCC------------
Q 003313 282 SYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVF--N------------RDMD------------ 335 (831)
Q Consensus 282 ~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~--~------------~~~~------------ 335 (831)
+.||+++|+++|+++++|+||++++||||||||||+|+|+|.++..... . ....
T Consensus 324 ~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 403 (995)
T 3ar4_A 324 TRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPI 403 (995)
T ss_dssp HHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEEC
T ss_pred HHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCccccccccccc
Confidence 9999999999999999999999999999999999999999999865210 0 0000
Q ss_pred -------hHHHHHHHHHhcccc------------CCChHHHHHHHHhCCh-------H-------------HHhhcccee
Q 003313 336 -------KDILVLLAARASRLE------------NQDAIDAAIINMLADP-------K-------------EARANINEV 376 (831)
Q Consensus 336 -------~~~~l~~a~~~~~~~------------~~~~~~~ai~~~~~~~-------~-------------~~~~~~~~l 376 (831)
...+...++.|+... .+||.|.|++.++.+. . ..+..++.+
T Consensus 404 ~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 483 (995)
T 3ar4_A 404 RSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKE 483 (995)
T ss_dssp CGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEE
T ss_pred cccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhhhCceE
Confidence 112333444443211 2589999998765211 0 134568899
Q ss_pred EEecCCCCCceEEEEEEcCCC-----cEEEEEccchHHHhhhccC----------chhhHHHHHHHHHHH--HhccCeee
Q 003313 377 HFLPFNPVDKRTAITYTDSEG-----NWYRASKGAPEQILNMCQE----------KEEIGGKVHEIINKL--AEKGLRSL 439 (831)
Q Consensus 377 ~~~~f~s~~k~~sv~v~~~~g-----~~~~~~kGa~e~i~~~~~~----------~~~~~~~~~~~~~~~--~~~G~r~l 439 (831)
+.+||+|+||||+++++..+| +...++|||||.|+++|.. +++.++++.+.++++ +++|+||+
T Consensus 484 ~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvL 563 (995)
T 3ar4_A 484 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCL 563 (995)
T ss_dssp EEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEE
T ss_pred EEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEE
Confidence 999999999999999987666 5789999999999999963 234566788888999 99999999
Q ss_pred eeeeecCCCCC----------CCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 003313 440 AVAVQEVPEMT----------EDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIG 509 (831)
Q Consensus 440 ~~a~~~~~~~~----------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~ 509 (831)
++||++++..+ .+.+|+|++|+|+++++||+|++++++|++|+++||+++|+|||+..+|.++|+++||.
T Consensus 564 a~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~ 643 (995)
T 3ar4_A 564 ALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIF 643 (995)
T ss_dssp EEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSS
T ss_pred EEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcC
Confidence 99999875432 12347899999999999999999999999999999999999999999999999999997
Q ss_pred CCCC--CCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecC
Q 003313 510 TNMY--PSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAG 587 (831)
Q Consensus 510 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~ 587 (831)
.... ...++.|.+++..+++++.+.+.+..+|+|++|+||.++|+.+|++|+.|+|+|||.||+|||++||+|||||+
T Consensus 644 ~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg~ 723 (995)
T 3ar4_A 644 GENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGS 723 (995)
T ss_dssp CTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEETT
T ss_pred CCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeCC
Confidence 5321 23466777777777788888899999999999999999999999999999999999999999999999999999
Q ss_pred chHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhccCCCChHHHHHHHHhhccc
Q 003313 588 ATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVSITIHIVLSFVLL-ALIWEYDFPPFMVLIIAVLNDGT 666 (831)
Q Consensus 588 ~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ni~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~ 666 (831)
|+++|+++||+++.+++|++|++++++||++|+|++|++.|++++|+..++..+++ .+.++.|++|+|++|+|+++|.+
T Consensus 724 g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~nl~~d~~ 803 (995)
T 3ar4_A 724 GTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGL 803 (995)
T ss_dssp SCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTTTHH
T ss_pred CCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999766555544 34566789999999999999974
Q ss_pred -hhccccCCCCCC-----CCC--CccchHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hcccc-cccc----------cc
Q 003313 667 -IITISKGRVKSS-----LRP--DGWKLNEIFAAGIVIGNYLALVTILFYWVVVHT--DFFET-HFHV----------RS 725 (831)
Q Consensus 667 -~~~l~~~~~~~~-----~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~-~~~~----------~~ 725 (831)
+++++++++++. |++ .+...+..+..++..|++++++++.+|++.+.. +.... ...+ ..
T Consensus 804 p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 883 (995)
T 3ar4_A 804 PATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPH 883 (995)
T ss_dssp HHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCSC
T ss_pred HHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhcccccccccccc
Confidence 788998876543 111 122234566667778999888877555433210 00000 0000 00
Q ss_pred C----CC--cHHHHHHHHHHHHHHHHHHHhhhhccCCCCCC--c-CchHHHHHHHHHHHHHHHHHHHhhh--cccccccc
Q 003313 726 L----SS--NTEEISSAVHLQVSIISQALIFVTRSQSWSFL--E-RPGALLMCAFVLAQLVATLIAVYAH--ISFAYISG 794 (831)
Q Consensus 726 ~----~~--~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~--~-~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 794 (831)
. .. .....+|++|.+++++|+++.+++|+.+.+++ . ..++++++++++.+++..++ .|.+ ..++.+.+
T Consensus 884 ~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~ 962 (995)
T 3ar4_A 884 FEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLI-LYVDPLPMIFKLKA 962 (995)
T ss_dssp CSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHH-HHSTHHHHHTTCCC
T ss_pred ccccccccccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHHHH-HHHHHHHHhhccCC
Confidence 0 00 12357899999999999999999998663322 1 23456666666655544433 4443 24567788
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003313 795 IGWGWAGVIWLYSLVFYILLDIIKFTVRT 823 (831)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~e~~k~~~r~ 823 (831)
++|..|++++++++++++++|++|++.|.
T Consensus 963 l~~~~w~~~~~~~~~~~~~~e~~k~~~r~ 991 (995)
T 3ar4_A 963 LDLTQWLMVLKISLPVIGLDEILKFIARN 991 (995)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 88888888889999999999999999883
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-78 Score=721.08 Aligned_cols=499 Identities=22% Similarity=0.317 Sum_probs=419.5
Q ss_pred CchhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEE-CCEEEEEeCCCcCCCcEEEEcCCCccccceEE
Q 003313 99 PDWQDS-VGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLR-DGQWKEQDAAVLVPGDIISIKFGDVIPADARL 176 (831)
Q Consensus 99 ~~~~~~-~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~r-dg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~l 176 (831)
..|+++ ++++++++++.+++.+.++|+++++++|.++.|++++++| ||++++|++++|+|||+|.|++||+|||||+|
T Consensus 185 ~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~v 264 (736)
T 3rfu_A 185 AVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEV 264 (736)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEE
Confidence 345554 4667888999999999999999999999999999999888 99999999999999999999999999999999
Q ss_pred EecCCeEEEcccccCCCccccccCCCeeeecceeee-----------ccchhhhHHHhhhcc-CccCcHHHHHHHHHHHH
Q 003313 177 LEGDPLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDST-EVVGHFQQVLTSIGNFC 244 (831)
Q Consensus 177 l~g~~~~Vdes~LTGEs~pv~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~-~~~~~l~~~~~~~~~~~ 244 (831)
++| ++.||||+|||||.|+.|.+|+.+|+||.+.+ .+|.+|++.++++++ ..++|+|+.+++++.++
T Consensus 265 l~G-~~~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~ 343 (736)
T 3rfu_A 265 QEG-RSFVDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWF 343 (736)
T ss_dssp CSS-CEEEECSSSTTCSSCEEECTTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHH
T ss_pred EEC-ceEeeecccCCccccEEeccCCcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHH
Confidence 999 57899999999999999999999999999877 789999999999877 47899999999999886
Q ss_pred HHHHHHHHHHHHHHHhhhch-----hhHhhHHH------------HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEE
Q 003313 245 ICFITVGMILEIIVMFPIQH-----RLYRDRIN------------MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVL 307 (831)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~------------~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i 307 (831)
+.++++..++.+++++.... ..+..++. .++++++.++.+++|+|+++|+++++|++|++|+|
T Consensus 344 v~~vl~ia~~~~~~w~~~~~~~~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i 423 (736)
T 3rfu_A 344 VPAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTL 423 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSSSTTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEE
Confidence 65554444433333332211 11222222 35667788999999999999999999999999999
Q ss_pred EecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhccceeEEecCCCCCce
Q 003313 308 CSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKR 387 (831)
Q Consensus 308 ~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~f~s~~k~ 387 (831)
|||||||||+|+|+|.++.. .+.++++++.+++..+..++ ||++.|+++++.+. ++......+|++..++
T Consensus 424 ~fDKTGTLT~g~~~v~~i~~----~~~~~~~~l~~aa~le~~s~-hPla~Aiv~~a~~~-----~~~~~~~~~f~~~~g~ 493 (736)
T 3rfu_A 424 VVDKTGTLTEGHPKLTRIVT----DDFVEDNALALAAALEHQSE-HPLANAIVHAAKEK-----GLSLGSVEAFEAPTGK 493 (736)
T ss_dssp EECCBTTTBCSSCEEEEEEE----SSSCHHHHHHHHHHHHHSSC-CHHHHHHHHHHHTT-----CCCCCCCSCCCCCTTT
T ss_pred EEeCCCCCcCCceEEEEEEe----cCCCHHHHHHHHHHHhhcCC-ChHHHHHHHHHHhc-----CCCccCcccccccCCc
Confidence 99999999999999999772 35678888888887776665 99999999987532 2223344578777766
Q ss_pred EEEEEEcCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeecccc
Q 003313 388 TAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLF 467 (831)
Q Consensus 388 ~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~ 467 (831)
.... ..+|+ .+.+|+++.+.+.+.. ...+.+..++++++|+|++++|++. +++|+++++
T Consensus 494 gv~~--~~~g~--~~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~G~~vl~va~d~-------------~~~G~i~i~ 552 (736)
T 3rfu_A 494 GVVG--QVDGH--HVAIGNARLMQEHGGD----NAPLFEKADELRGKGASVMFMAVDG-------------KTVALLVVE 552 (736)
T ss_dssp EEEE--CSSSS--CEEEESHHHHHHHCCC----CHHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEE
T ss_pred eEEE--EECCE--EEEEcCHHHHHHcCCC----hhHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEee
Confidence 4322 23554 3567999988765433 2345667788999999999999976 899999999
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
|++|++++++|++|+++|++++|+|||+..+|..+|+++||+. ++++++|+
T Consensus 553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~-----------------------------v~a~~~P~ 603 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK-----------------------------VVAEIMPE 603 (736)
T ss_dssp CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC-----------------------------EECSCCHH
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE-----------------------------EEEecCHH
Confidence 9999999999999999999999999999999999999999952 79999999
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHH
Q 003313 548 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMI 627 (831)
Q Consensus 548 ~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~ 627 (831)
+|.++++.+|++|+.|+|+|||.||+|||++||||||||+|+|.++++||+|++++++++|.+++++||++++||++|+.
T Consensus 604 ~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~ 683 (736)
T 3rfu_A 604 DKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLF 683 (736)
T ss_dssp HHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCCccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHh-ccCCCChHHHHH
Q 003313 628 HAVSITIHIVLSFVLLALI-WEYDFPPFMVLI 658 (831)
Q Consensus 628 ~~l~~ni~~~~~~~~~~~~-~~~~~~~~~~l~ 658 (831)
|++.||+..++..++.++. +++.++|+.-..
T Consensus 684 ~a~~yN~~~iplAag~l~p~~G~~l~P~~aa~ 715 (736)
T 3rfu_A 684 FAFIYNVLGVPLAAGVLYPLTGLLLSPMIAAA 715 (736)
T ss_dssp HHHHHHHHHHHHHHTSSTTTSSCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhhHHHHHH
Confidence 9999999766555443333 355667865433
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-76 Score=697.55 Aligned_cols=501 Identities=24% Similarity=0.318 Sum_probs=409.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEEec
Q 003313 100 DWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEG 179 (831)
Q Consensus 100 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g 179 (831)
+|..+++++++++++..++...++|++++++++.++.|++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 95 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 174 (645)
T 3j08_A 95 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 174 (645)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEEC
Confidence 34456677778888888888888888888999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEcccccCCCccccccCCCeeeecceeee-----------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHHHHH
Q 003313 180 DPLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCICF 247 (831)
Q Consensus 180 ~~~~Vdes~LTGEs~pv~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~ 247 (831)
++.||||+|||||.|+.|.+||.+|+||.+.+ .+|.+|++.++++++. +++++|+.+++++.+++.+
T Consensus 175 -~~~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~ 253 (645)
T 3j08_A 175 -ESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT 253 (645)
T ss_dssp -CEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHH
T ss_pred -cEEEEcccccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999998876 7899999999998875 7899999999999886655
Q ss_pred HHHHHHHHHHHHhhhchh----hHhhHHH------------HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEecC
Q 003313 248 ITVGMILEIIVMFPIQHR----LYRDRIN------------MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVK 311 (831)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~----~~~~~l~------------~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DK 311 (831)
+++..++.++.++..... .+..++. .+++++..++.+++|+|++||+++++|++|+++++||||
T Consensus 254 vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDK 333 (645)
T 3j08_A 254 VLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDK 333 (645)
T ss_dssp HHHHHHHHHHCSSCCCSCSCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEG
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcC
Confidence 544343333333222111 1111211 456777889999999999999999999999999999999
Q ss_pred CCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhccceeEEecCCCCCceEEEE
Q 003313 312 TAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAIT 391 (831)
Q Consensus 312 TGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sv~ 391 (831)
|||||+|+|+|.++... +.++++++.+++.++..++ ||++.|+++++.+.. .+.....+|++..++.. .
T Consensus 334 TGTLT~~~~~v~~~~~~----~~~~~~~l~~aa~~e~~s~-hPla~Aiv~~a~~~g-----~~~~~~~~~~~~~g~g~-~ 402 (645)
T 3j08_A 334 TGTLTKGKPEVTDLVPL----NGDERELLRLAAIAERRSE-HPIAEAIVKKALEHG-----IELGEPEKVEVIAGEGV-V 402 (645)
T ss_dssp GGTSSSSCCEEEEEEES----SSCHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHTT-----CCCCSCCCCEEETTTEE-E
T ss_pred cccccCCCeEEEEEEeC----CCCHHHHHHHHHHHhhcCC-ChhHHHHHHHHHhcC-----CCcCCccceEEecCCce-E
Confidence 99999999999998742 4577888888888777665 999999998864221 11111111211111111 0
Q ss_pred EEcCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCC
Q 003313 392 YTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPR 471 (831)
Q Consensus 392 v~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr 471 (831)
. ..+.+|+++.+.+... +.++.+.+..++++++|+|+++++++. +++|+++++|++|
T Consensus 403 ~-------~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~l~va~~~-------------~~~G~i~~~D~l~ 459 (645)
T 3j08_A 403 A-------DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLK 459 (645)
T ss_dssp E-------TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCCCEEEEETT-------------EEEEEEEEECCCT
T ss_pred E-------EEEEECCHHHHHhcCC---CccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEecCCch
Confidence 0 2356799887655322 234567777888999999999999865 8999999999999
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHH
Q 003313 472 HDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYE 551 (831)
Q Consensus 472 ~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~ 551 (831)
++++++|++|+++|++++|+|||+..+|.++|+++|+. .++++++|++|.+
T Consensus 460 ~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~-----------------------------~~~~~~~P~~K~~ 510 (645)
T 3j08_A 460 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD-----------------------------LVIAEVLPHQKSE 510 (645)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------EEECSCCTTCHHH
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC-----------------------------EEEEeCCHHhHHH
Confidence 99999999999999999999999999999999999995 2699999999999
Q ss_pred HHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHH
Q 003313 552 IVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVS 631 (831)
Q Consensus 552 iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~ 631 (831)
+++.+|++ +.|+|+|||.||+|||++||+|||||+|++.++++||+++.+++++++.+++++||++++|+++|+.|+++
T Consensus 511 ~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~ 589 (645)
T 3j08_A 511 EVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALI 589 (645)
T ss_dssp HHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hccCCCChHHHHHHHHhhcc
Q 003313 632 ITIHIVLSFVLLAL-IWEYDFPPFMVLIIAVLNDG 665 (831)
Q Consensus 632 ~ni~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~ 665 (831)
+|+..++..++.++ +++..++|+.-.....+.+.
T Consensus 590 ~N~~~i~la~~~~~~~~g~~l~p~~a~~~m~~ss~ 624 (645)
T 3j08_A 590 YNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSV 624 (645)
T ss_dssp HHHHHHHHHTTTTTTTCCCSCCHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHhHhhhcccccCHHHHHHHHhcchH
Confidence 99875444333222 24457788754444444443
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-76 Score=704.01 Aligned_cols=501 Identities=23% Similarity=0.321 Sum_probs=410.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEEec
Q 003313 100 DWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEG 179 (831)
Q Consensus 100 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g 179 (831)
+|..+++++++++++..++...++|++++++++.++.|++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 173 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 252 (723)
T 3j09_A 173 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 252 (723)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEEC
Confidence 44456677778888888888888888889999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEcccccCCCccccccCCCeeeecceeee-----------ccchhhhHHHhhhccC-ccCcHHHHHHHHHHHHHHH
Q 003313 180 DPLKIDQSELTGESLTVTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCICF 247 (831)
Q Consensus 180 ~~~~Vdes~LTGEs~pv~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~ 247 (831)
++.||||+|||||.|+.|.+||.+|+||.+.+ .+|.+|++.++++++. +++++|+.+++++.+++.+
T Consensus 253 -~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~ 331 (723)
T 3j09_A 253 -ESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT 331 (723)
T ss_dssp -CEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHH
T ss_pred -CeEEecccccCCCcceeecCCCeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 67999999999999999999999999998876 7899999999998875 7899999999999886655
Q ss_pred HHHHHHHHHHHHhhhchh----hHhhHHH------------HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEecC
Q 003313 248 ITVGMILEIIVMFPIQHR----LYRDRIN------------MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVK 311 (831)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~----~~~~~l~------------~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DK 311 (831)
+++..++.++.++..... .+..++. .+++++..++.+++|+|+++|+++++|++|++|++||||
T Consensus 332 vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDK 411 (723)
T 3j09_A 332 VLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDK 411 (723)
T ss_dssp HHHHHHHHHTTSCSSTTCTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEH
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcC
Confidence 544333333322222111 2222222 356677889999999999999999999999999999999
Q ss_pred CCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhccceeEEecCCCCCceEEEE
Q 003313 312 TAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAIT 391 (831)
Q Consensus 312 TGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sv~ 391 (831)
|||||+|+|+|.++... +.++++++.+++..+..++ ||++.|+++++.+........+ +|.+..++.. .
T Consensus 412 TGTLT~g~~~v~~~~~~----~~~~~~~l~~aa~~e~~s~-hP~~~Ai~~~a~~~~~~~~~~~-----~~~~~~g~g~-~ 480 (723)
T 3j09_A 412 TGTLTKGKPEVTDLVPL----NGDERELLRLAAIAERRSE-HPIAEAIVKKALEHGIELGEPE-----KVEVIAGEGV-V 480 (723)
T ss_dssp HHHTSCSCCEEEEEEES----SSCHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHTTCCCCSCC-----CCEEETTTEE-E
T ss_pred CCccccCceEEEEEEeC----CCCHHHHHHHHHHHhccCC-CchhHHHHHHHHhcCCCcCCcc-----ceEEecCCce-E
Confidence 99999999999998742 4577888888888777665 9999999988642111011111 1211111110 0
Q ss_pred EEcCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCC
Q 003313 392 YTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPR 471 (831)
Q Consensus 392 v~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr 471 (831)
+ ..+.+|+++.+.+... +.++.+.+..++++++|+|+++++++. +++|+++++|++|
T Consensus 481 -----~--~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~va~~~-------------~~~G~i~i~D~~~ 537 (723)
T 3j09_A 481 -----A--DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLK 537 (723)
T ss_dssp -----E--TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEEECCSC
T ss_pred -----E--EEEEECCHHHHHhcCC---CccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEeecCCcc
Confidence 0 2356799887765332 234567778889999999999999865 8999999999999
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHH
Q 003313 472 HDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYE 551 (831)
Q Consensus 472 ~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~ 551 (831)
++++++|++|+++|++++|+|||+..+|.++|+++|++ .++++++|+||.+
T Consensus 538 ~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~-----------------------------~~~~~~~P~~K~~ 588 (723)
T 3j09_A 538 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD-----------------------------LVIAEVLPHQKSE 588 (723)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------EEECSCCTTCHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc-----------------------------EEEccCCHHHHHH
Confidence 99999999999999999999999999999999999995 2699999999999
Q ss_pred HHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHHHHHHHHHH
Q 003313 552 IVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMKNCMIHAVS 631 (831)
Q Consensus 552 iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~ 631 (831)
+++.+|++ +.|+|+|||.||+|||++||+|||||+|+|.++++||+++++++++++.+++++||++++|+++|+.|+++
T Consensus 589 ~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~ 667 (723)
T 3j09_A 589 EVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALI 667 (723)
T ss_dssp HHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hccCCCChHHHHHHHHhhcc
Q 003313 632 ITIHIVLSFVLLAL-IWEYDFPPFMVLIIAVLNDG 665 (831)
Q Consensus 632 ~ni~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~ 665 (831)
+|+..++..++.++ +++..++|+.-.+...+.+.
T Consensus 668 ~n~~~i~~a~~~~~~~~g~~l~p~~a~~~m~~ss~ 702 (723)
T 3j09_A 668 YNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSV 702 (723)
T ss_dssp HHHHHHHHHHHTTSSCCCCSCCHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHhhhhccccccCHHHHHHHHhccHH
Confidence 99975544433222 24557888764444444443
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-35 Score=309.47 Aligned_cols=259 Identities=20% Similarity=0.283 Sum_probs=203.2
Q ss_pred HHHhhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHH
Q 003313 281 ASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAII 360 (831)
Q Consensus 281 ~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~ 360 (831)
++.+++|+|+++|+++++|.++++++||||||||||+|+|.|.++. ++++++.+++..+..++ ||++.|+.
T Consensus 5 a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--------~~~~~l~~~~~~e~~s~-hp~a~ai~ 75 (263)
T 2yj3_A 5 LYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--------GDSLSLAYAASVEALSS-HPIAKAIV 75 (263)
Confidence 5678999999999999999999999999999999999999998753 34566666666665554 99999998
Q ss_pred HHhCChHHHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeee
Q 003313 361 NMLADPKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLA 440 (831)
Q Consensus 361 ~~~~~~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~ 440 (831)
.++..........+..+.++-.+. ... .++ ..+..|+++ +|.+ +.
T Consensus 76 ~~~~~~g~~~~~~~~~~~~~G~g~----~~~---~~~--~~~~~G~~~-------------------------~~~~-~~ 120 (263)
T 2yj3_A 76 KYAKEQGVKILEVKDFKEISGIGV----RGK---ISD--KIIEVKKAE-------------------------NNND-IA 120 (263)
Confidence 776432110000000000000000 000 000 001111111 2444 55
Q ss_pred eeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccC
Q 003313 441 VAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLG 520 (831)
Q Consensus 441 ~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~ 520 (831)
++++. .+.|.+.+.|+++|++.+++++|++.|++++|+|||+...+..+++++|+..
T Consensus 121 ~~~~~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------- 177 (263)
T 2yj3_A 121 VYING-------------EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE---------- 177 (263)
Confidence 55554 7899999999999999999999999999999999999999999999999852
Q ss_pred CcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEE
Q 003313 521 RDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVL 600 (831)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl 600 (831)
+|+.+.|++|...++.++..++.|+|+|||.||++|++.||+|+++|++++.+++.||+++
T Consensus 178 -------------------~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v~ 238 (263)
T 2yj3_A 178 -------------------YYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADIIL 238 (263)
Confidence 4777789999999999999999999999999999999999999999999999999999999
Q ss_pred eCCChhHHHHHHHHhHHHHHHHHHH
Q 003313 601 TEPGLSVICSAVLTSRTVFQIMKNC 625 (831)
Q Consensus 601 ~~~~~~~i~~~i~~gR~~~~~i~~~ 625 (831)
+++++..+..+++.+|+++++|++|
T Consensus 239 ~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 239 VSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 9999999999999999999999986
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=264.56 Aligned_cols=279 Identities=27% Similarity=0.360 Sum_probs=210.5
Q ss_pred HHHhhhcCceEEccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHH
Q 003313 281 ASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAII 360 (831)
Q Consensus 281 ~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~ 360 (831)
|.++++|+|+++|+++++|++++++++|||||||||.+++.+.++.. . .+ +.++++.+++..+..+. ||++.++.
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~--~-~~-~~~~~l~~~~~~e~~s~-hp~~~a~~ 83 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVP--L-NG-DERELLRLAAIAERRSE-HPIAEAIV 83 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEE--S-SS-CHHHHHHHHHHHTTTCC-SHHHHHHH
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEe--C-CC-CHHHHHHHHHHHhhcCC-CHHHHHHH
Confidence 56899999999999999999999999999999999999999988764 2 23 77888888877766554 99999998
Q ss_pred HHhCChHHHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeee
Q 003313 361 NMLADPKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLA 440 (831)
Q Consensus 361 ~~~~~~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~ 440 (831)
.++..........+....++ .. .+ .. ..+.+|+++.+.+.... .++.+.+..+.+.++|.++++
T Consensus 84 ~~~~~~g~~~~~~~~~~~~~-----G~-~~--~~-----~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~i~ 147 (287)
T 3a1c_A 84 KKALEHGIELGEPEKVEVIA-----GE-GV--VA-----DGILVGNKRLMEDFGVA---VSNEVELALEKLEREAKTAVI 147 (287)
T ss_dssp HHHHHTTCCCCCCSCEEEET-----TT-EE--EE-----TTEEEECHHHHHHTTCC---CCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhcCCCccccccceeec-----CC-Ce--EE-----EEEEECCHHHHHhcCCC---ccHHHHHHHHHHHhCCCeEEE
Confidence 87632110000011111111 00 00 00 12345766654332211 112345556778889999999
Q ss_pred eeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccC
Q 003313 441 VAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLG 520 (831)
Q Consensus 441 ~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~ 520 (831)
++++. .+.+.+...++++|++.++++.|+++|+++.++||++...+..+.+.+|+..
T Consensus 148 ~~~d~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------- 204 (287)
T 3a1c_A 148 VARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------- 204 (287)
T ss_dssp EEETT-------------EEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE----------
T ss_pred EEECC-------------EEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce----------
Confidence 99876 8999999999999999999999999999999999999999999999999842
Q ss_pred CcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEE
Q 003313 521 RDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVL 600 (831)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl 600 (831)
.|..+.|+.|...++.++.. +.++|+||+.||++|.+.|+++++++++.+..++.||+++
T Consensus 205 -------------------~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~v~ 264 (287)
T 3a1c_A 205 -------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVL 264 (287)
T ss_dssp -------------------EECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSEEE
T ss_pred -------------------eeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeCCCCHHHHhhCCEEE
Confidence 46666789999999999888 8999999999999999999999999987777778899999
Q ss_pred eCCChhHHHHHHHHhHHHHHHHH
Q 003313 601 TEPGLSVICSAVLTSRTVFQIMK 623 (831)
Q Consensus 601 ~~~~~~~i~~~i~~gR~~~~~i~ 623 (831)
.++++..+..++..+|+++++|+
T Consensus 265 ~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 265 IRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp SSSCTHHHHHHHHTTC-------
T ss_pred eCCCHHHHHHHHHHHHHHHHhhC
Confidence 98999999999999999999885
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-26 Score=245.88 Aligned_cols=276 Identities=29% Similarity=0.369 Sum_probs=204.9
Q ss_pred EccchhhhhhcCceEEEecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhh
Q 003313 292 TKRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEARA 371 (831)
Q Consensus 292 vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~ 371 (831)
+|+++++|++++++.|||||+||||.|+++|.++.. .. + +.+.++.+++.....+. ++...++.+.+........
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~--~~-~-~~~~~~~~~~~~~~~s~-~~~~~a~~~~~~~~g~~~~ 75 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVG--FN-H-SEDELLQIAASLEARSE-HPIAAAIVEEAEKRGFGLT 75 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEE--SS-S-CHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHTTCCCC
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEe--cC-C-CHHHHHHHHHHhhccCC-CHHHHHHHHHHHhcCCCCC
Confidence 589999999999999999999999999999998763 33 3 77788887777665554 8888888776532111011
Q ss_pred ccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCC
Q 003313 372 NINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTE 451 (831)
Q Consensus 372 ~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~ 451 (831)
....+..++. ...... .++ ..+..|.++.+........ .....+..++.+.+.+++..
T Consensus 76 ~~~~~~~~~g----~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~------ 133 (280)
T 3skx_A 76 EVEEFRAIPG----KGVEGI---VNG--RRYMVVSPGYIRELGIKTD-------ESVEKLKQQGKTVVFILKNG------ 133 (280)
T ss_dssp CCEEEEEETT----TEEEEE---ETT--EEEEEECHHHHHHTTCCCC-------TTHHHHHTTTCEEEEEEETT------
T ss_pred CccceeecCC----CEEEEE---ECC--EEEEEecHHHHHHcCCCch-------HHHHHHHhCCCeEEEEEECC------
Confidence 1112222211 111111 133 2334577776655433211 22345677888888888765
Q ss_pred CCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccH
Q 003313 452 DSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPV 531 (831)
Q Consensus 452 ~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~ 531 (831)
.++|.+.+.++++|++.++++.|++.|+++.++||++...+..+.+.+|+..
T Consensus 134 -------~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~--------------------- 185 (280)
T 3skx_A 134 -------EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD--------------------- 185 (280)
T ss_dssp -------EEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------
T ss_pred -------EEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh---------------------
Confidence 7899999999999999999999999999999999999999999999999852
Q ss_pred HHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHH
Q 003313 532 DELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSA 611 (831)
Q Consensus 532 ~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~ 611 (831)
.|..+.|.+|...++.+.+.. .++|+||+.||++|++.|++|++||++++..++.||+++..+++.++.++
T Consensus 186 --------~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~~ 256 (280)
T 3skx_A 186 --------YFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAAI 256 (280)
T ss_dssp --------EECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHHH
T ss_pred --------HhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHHH
Confidence 477788999999999998876 56999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHHHH
Q 003313 612 VLTSRTVFQIMKNCMIHAVS 631 (831)
Q Consensus 612 i~~gR~~~~~i~~~i~~~l~ 631 (831)
++.+|++++++++|+.|++.
T Consensus 257 l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 257 VELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHHHHTCCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999998764
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.90 E-value=3.2e-24 Score=193.63 Aligned_cols=99 Identities=28% Similarity=0.462 Sum_probs=91.9
Q ss_pred HHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceEEEecCCeEEEcccccCCCccccccCCCeeeec
Q 003313 128 ATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKETGDEVFSG 207 (831)
Q Consensus 128 ~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~aG 207 (831)
++++|.++.|++++|+|||++++|++++|+|||+|.|++||+|||||+|++| .+.||||+|||||.|+.|.+||.+|+|
T Consensus 2 al~~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g-~~~vdeS~LTGEs~pv~k~~g~~v~aG 80 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG-ESYVDESMISGEPVPVLKSKGDEVFGA 80 (113)
T ss_dssp HHHHHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC-CEEEECHHHHCCSSCEEECTTCEECTT
T ss_pred HHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-eEEEEccccCCCCccEEECCCCEEEeC
Confidence 4677888899999999999999999999999999999999999999999999 589999999999999999999999999
Q ss_pred ceeee-----------ccchhhhHHHhhhcc
Q 003313 208 LTCKH-----------VHSFFGKAADLVDST 227 (831)
Q Consensus 208 t~v~~-----------~~t~~g~~~~~~~~~ 227 (831)
|.+.+ .+|.+|++.++++++
T Consensus 81 t~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 81 TINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp CEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred CEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 99887 788888888887653
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=9.9e-24 Score=193.90 Aligned_cols=105 Identities=25% Similarity=0.424 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHhccCCCeEEEEECCE------EEEEeCCCcCCCcEEEEcCCCccccceEEEecCCeEEEcccccCCCcc
Q 003313 122 ESNAENATAALMAHLTPKTKVLRDGQ------WKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLT 195 (831)
Q Consensus 122 ~~~~~~~~~~l~~~~~~~~~V~rdg~------~~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~g~~~~Vdes~LTGEs~p 195 (831)
++|+++++++|.++.|++++|+|+|+ +++|++++|+|||+|.|++||+|||||+|++|+ ..||||+|||||.|
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~-~~vdeS~LTGEs~p 80 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGH-SMVDESLITGEAMP 80 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCC-CEEECTTTTCCSSC
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEcc-EEEEeccccCCCcc
Confidence 56788899999999999999999764 689999999999999999999999999999995 58999999999999
Q ss_pred ccccCCCeeeecceeee-----------ccchhhhHHHhhhcc
Q 003313 196 VTKETGDEVFSGLTCKH-----------VHSFFGKAADLVDST 227 (831)
Q Consensus 196 v~K~~g~~v~aGt~v~~-----------~~t~~g~~~~~~~~~ 227 (831)
+.|.+|+.+|+||.+.+ .+|.+|++.++++++
T Consensus 81 v~k~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 81 VAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp EECCTTEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred EEeCCCCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 99999999999999887 788889998887654
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.87 E-value=4e-23 Score=222.17 Aligned_cols=146 Identities=13% Similarity=0.042 Sum_probs=114.7
Q ss_pred cccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHH-H-HHhcCcEE
Q 003313 465 PLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDE-L-IEKADGFT 542 (831)
Q Consensus 465 ~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~v~~ 542 (831)
...+++||+++++++.|+++|++++|+|||...++.++++++|+..... .+. ...+.. ++..+.. . .+..+.++
T Consensus 137 ~~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~--~i~-~n~l~~-~~~~~~~~~~~~~i~~~~ 212 (297)
T 4fe3_A 137 DSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNV--KVV-SNFMDF-DENGVLKGFKGELIHVFN 212 (297)
T ss_dssp TSCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTE--EEE-EECEEE-CTTSBEEEECSSCCCTTC
T ss_pred hcCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccc--eEE-eeeEEE-cccceeEeccccccchhh
Confidence 4468999999999999999999999999999999999999999864310 011 000000 0000000 0 01124577
Q ss_pred EeChHHHHHHHHHHhhcCCEEEEEcCCccChhh---hccCCeeEEec-------CchHHHhhhcCEEEeCCChhHHHHHH
Q 003313 543 DVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPA---LKKADIGIAVA-------GATEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 543 ~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~a---l~~AdvgIa~~-------~~~~~a~~aadivl~~~~~~~i~~~i 612 (831)
+..|.+|...+..+++.++.|+|+|||+||+|| ++.||+||||| ++++.+++++|+||++|++..++.+|
T Consensus 213 k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~i 292 (297)
T 4fe3_A 213 KHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSI 292 (297)
T ss_dssp HHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHH
T ss_pred cccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHH
Confidence 888999999999999999999999999999999 55999999999 79999999999999999999999987
Q ss_pred HH
Q 003313 613 LT 614 (831)
Q Consensus 613 ~~ 614 (831)
.+
T Consensus 293 l~ 294 (297)
T 4fe3_A 293 LQ 294 (297)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.1e-18 Score=166.03 Aligned_cols=140 Identities=18% Similarity=0.312 Sum_probs=116.4
Q ss_pred CCCCChHHHHHHHHHhcc--ccCCChHHHHHHHHhCCh--HHHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccc
Q 003313 331 NRDMDKDILVLLAARASR--LENQDAIDAAIINMLADP--KEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGA 406 (831)
Q Consensus 331 ~~~~~~~~~l~~a~~~~~--~~~~~~~~~ai~~~~~~~--~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa 406 (831)
..+.+.+.++.+|+.++. ...+||+|.|+++++... ...+..|+.++.+||+|.||||++++++.+|+.++++|||
T Consensus 10 ~~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGA 89 (170)
T 3gwi_A 10 ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGA 89 (170)
T ss_dssp TTSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEEC
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCC
Confidence 346778899999998884 345699999999987532 2346789999999999999999999987778889999999
Q ss_pred hHHHhhhccC----------chhhHHHHHHHHHHHHhccCeeeeeeeecCCCCC---CCCCCCCceeeeeccccCCC
Q 003313 407 PEQILNMCQE----------KEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMT---EDSPGGPRSFCGLLPLFDPP 470 (831)
Q Consensus 407 ~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~---~~~~e~~l~~lG~i~~~D~l 470 (831)
||.|+++|+. +++.++.+.+.+++|+++|+|||++||+.++..+ ..+.|++|+|+|+++|-|.-
T Consensus 90 pE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~~ 166 (170)
T 3gwi_A 90 LQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDHH 166 (170)
T ss_dssp HHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC--
T ss_pred cHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhcccccc
Confidence 9999999973 3556788999999999999999999999987543 23469999999999998853
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.43 E-value=8.6e-14 Score=138.74 Aligned_cols=126 Identities=23% Similarity=0.376 Sum_probs=106.1
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHH
Q 003313 477 TIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKIL 556 (831)
Q Consensus 477 ~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l 556 (831)
+++.|+++|+++.++||++...+..+++++|+.. +|... .+|...++.+
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~-----------------------------~f~~~--~~K~~~~~~~ 102 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH-----------------------------LFQGR--EDKLVVLDKL 102 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE-----------------------------EECSC--SCHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH-----------------------------HhcCc--CChHHHHHHH
Confidence 8999999999999999999999999999999853 12222 4566666655
Q ss_pred hhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCC----hhHHHHHHHHhHHHHHHHHHHHHH
Q 003313 557 QEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPG----LSVICSAVLTSRTVFQIMKNCMIH 628 (831)
Q Consensus 557 ~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~----~~~i~~~i~~gR~~~~~i~~~i~~ 628 (831)
.++ .+.++|+||+.||++|++.|+++++++++.+.+++.||+++.+++ +..+.+.+..+|..++++++++.|
T Consensus 103 ~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~~ 182 (189)
T 3mn1_A 103 LAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYLE 182 (189)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTST
T ss_pred HHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHhc
Confidence 543 567999999999999999999999999999999999999998764 667888888999999999999999
Q ss_pred HHHHH
Q 003313 629 AVSIT 633 (831)
Q Consensus 629 ~l~~n 633 (831)
.+.+|
T Consensus 183 ~~~~~ 187 (189)
T 3mn1_A 183 GHHHH 187 (189)
T ss_dssp TC---
T ss_pred ccccc
Confidence 88776
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.31 E-value=2.3e-12 Score=140.55 Aligned_cols=151 Identities=16% Similarity=0.126 Sum_probs=110.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCC-----CccccCCcCCCCCcccHHHHHHhcCcEEE
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYP-----SSLLLGRDKDENEALPVDELIEKADGFTD 543 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 543 (831)
+++|++.+.++.|+++|+++.++||+....+..+.+++|+...... ...+.+.-... ....+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~-------------~~~~k 244 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGE-------------VVSAQ 244 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESC-------------CCCHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeeccc-------------ccChh
Confidence 7899999999999999999999999999999999999998531000 00000000000 00111
Q ss_pred eChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHHHHHH
Q 003313 544 VFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVFQIMK 623 (831)
Q Consensus 544 ~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~~~i~ 623 (831)
-.|+...++++.++-..+.++|+|||.||++|++.|++|++| ++.+..++.||.++..+++.++..++.......++++
T Consensus 245 pk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~~ 323 (335)
T 3n28_A 245 TKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKLS 323 (335)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCCC
T ss_pred hhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhhc
Confidence 233344445555554567899999999999999999999999 8999999999999999999999999998888888999
Q ss_pred HHHHHHHHHH
Q 003313 624 NCMIHAVSIT 633 (831)
Q Consensus 624 ~~i~~~l~~n 633 (831)
+|+.+.+.+|
T Consensus 324 ~~~~~~~~~~ 333 (335)
T 3n28_A 324 WKSKEGHHHH 333 (335)
T ss_dssp CC--------
T ss_pred cccccccccc
Confidence 9999988776
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.25 E-value=9.4e-12 Score=124.10 Aligned_cols=123 Identities=19% Similarity=0.273 Sum_probs=100.6
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEe--ChHHHHHHHH
Q 003313 477 TIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDV--FAEHKYEIVK 554 (831)
Q Consensus 477 ~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~P~~K~~iv~ 554 (831)
+|+.|+++|+++.++||++...+..+++++|+.. +|... .|+-...+++
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~-----------------------------~~~~~kpk~~~~~~~~~ 104 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH-----------------------------YYKGQVDKRSAYQHLKK 104 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-----------------------------EECSCSSCHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-----------------------------ceeCCCChHHHHHHHHH
Confidence 3999999999999999999999999999999853 12222 3455566666
Q ss_pred HHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChh----HHHHHHHHhHHHHHHHHHHHHH
Q 003313 555 ILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLS----VICSAVLTSRTVFQIMKNCMIH 628 (831)
Q Consensus 555 ~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~----~i~~~i~~gR~~~~~i~~~i~~ 628 (831)
.++-..+.++|+||+.||++|++.|+++++++++.+.+++.||+++.+++.. .+.+.+...|..++++.+++.+
T Consensus 105 ~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~~ 182 (191)
T 3n1u_A 105 TLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLK 182 (191)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HhCCCHHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHh
Confidence 6666667899999999999999999999999999999999999999988744 4556666777777777776654
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.4e-11 Score=123.15 Aligned_cols=103 Identities=19% Similarity=0.256 Sum_probs=84.6
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHH
Q 003313 476 DTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKI 555 (831)
Q Consensus 476 ~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~ 555 (831)
.+|+.|+++|+++.++||++...+..+++++|+.. +|... ..|...++.
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~-----------------------------~~~~~--k~k~~~~~~ 107 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL-----------------------------IYQGQ--DDKVQAYYD 107 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE-----------------------------EECSC--SSHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE-----------------------------EeeCC--CCcHHHHHH
Confidence 45999999999999999999999999999999852 22222 235555544
Q ss_pred Hhh----cCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHH
Q 003313 556 LQE----KKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVIC 609 (831)
Q Consensus 556 l~~----~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~ 609 (831)
+.+ ..+.++++||+.||.+|++.|+++++|+++.+.+++.||+++.+++-.+++
T Consensus 108 ~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~~~~~~G~~ 165 (195)
T 3n07_A 108 ICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHGAV 165 (195)
T ss_dssp HHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECSSCTTTTHH
T ss_pred HHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEcCCCCCCHH
Confidence 433 346799999999999999999999999999999999999999887765543
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=2.2e-11 Score=120.19 Aligned_cols=130 Identities=20% Similarity=0.169 Sum_probs=103.2
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHH
Q 003313 472 HDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYE 551 (831)
Q Consensus 472 ~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~ 551 (831)
+++.++|++|+++|++++++||++...+..+++++|+.. .|... ..|..
T Consensus 38 ~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~-----------------------------~~~~~--k~k~~ 86 (180)
T 1k1e_A 38 VRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL-----------------------------FFLGK--LEKET 86 (180)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE-----------------------------EEESC--SCHHH
T ss_pred cchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce-----------------------------eecCC--CCcHH
Confidence 456799999999999999999999999999999999853 12222 33555
Q ss_pred HHHHHhh-cC---CEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHH----HHHHHhHHHHHHHH
Q 003313 552 IVKILQE-KK---HVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVIC----SAVLTSRTVFQIMK 623 (831)
Q Consensus 552 iv~~l~~-~g---~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~----~~i~~gR~~~~~i~ 623 (831)
.++.+.+ .| +.++|+||+.||++|++.|+++++++++.+.+++.||+++.+++..++. +.+...|..+++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~~~ 166 (180)
T 1k1e_A 87 ACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSVFD 166 (180)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHHHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhhhh
Confidence 5554433 23 6799999999999999999999999999999999999999888766655 34445666788888
Q ss_pred HHHHHHHHH
Q 003313 624 NCMIHAVSI 632 (831)
Q Consensus 624 ~~i~~~l~~ 632 (831)
.++.|+.+.
T Consensus 167 ~~~~~~~~~ 175 (180)
T 1k1e_A 167 TAQGFLKSV 175 (180)
T ss_dssp CHHHHHHHG
T ss_pred hccchhhhh
Confidence 887777654
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.22 E-value=2.8e-11 Score=124.12 Aligned_cols=147 Identities=20% Similarity=0.150 Sum_probs=107.1
Q ss_pred cCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC--CCcccc---CCcC-CC---------------
Q 003313 467 FDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY--PSSLLL---GRDK-DE--------------- 525 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~--~~~~~~---~~~~-~~--------------- 525 (831)
..++.+++.++|++|+++|++++++||++...+..+++++|+..... ++..+. +... ..
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 44678899999999999999999999999999999999999864211 011111 1111 00
Q ss_pred ----------------------CCcccHHHHHHh--cC-----cEEEeCh--HHHHHHHHHHhhc----CCEEEEEcCCc
Q 003313 526 ----------------------NEALPVDELIEK--AD-----GFTDVFA--EHKYEIVKILQEK----KHVVGMTGDGV 570 (831)
Q Consensus 526 ----------------------~~~~~~~~~~~~--~~-----v~~~~~P--~~K~~iv~~l~~~----g~~v~~iGDG~ 570 (831)
.+.+.++++.+. .. .+.++.| .+|...++.+.++ .+.++++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 001112222211 11 1234455 5798888887664 35699999999
Q ss_pred cChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 571 NDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 571 ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
||.+|++.|++|++|+++.+..++.||+++.+++-+++.++++
T Consensus 180 nD~~m~~~ag~~va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred HhHHHHHHcCceEEecCchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 9999999999999999999999999999999999999998875
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.18 E-value=2.9e-11 Score=117.59 Aligned_cols=136 Identities=19% Similarity=0.137 Sum_probs=98.9
Q ss_pred ccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH--HhCCCCC
Q 003313 434 KGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGR--RLGIGTN 511 (831)
Q Consensus 434 ~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~--~~gi~~~ 511 (831)
++.+.+++-.++.-.+..-.+..+-..++.+.++|. .+|+.|+++|+++.++||+ ..+..+++ .+|+.
T Consensus 7 ~~ikliv~D~DGtL~d~~~~~~~~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-- 76 (168)
T 3ewi_A 7 KEIKLLVCNIDGCLTNGHIYVSGDQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-- 76 (168)
T ss_dssp CCCCEEEEECCCCCSCSCCBCCSSCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC--
T ss_pred hcCcEEEEeCccceECCcEEEcCCCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE--
Confidence 456777766655311111111122255677777776 3899999999999999999 67778888 55652
Q ss_pred CCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecC
Q 003313 512 MYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAG 587 (831)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~ 587 (831)
. +. .+++|...++.+.++ .+.++|+||+.||.+|++.|+++++|++
T Consensus 77 ~----------------------------~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~n 126 (168)
T 3ewi_A 77 T----------------------------EV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPAD 126 (168)
T ss_dssp E----------------------------EC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTT
T ss_pred E----------------------------EE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCC
Confidence 1 11 124577777666553 4579999999999999999999999999
Q ss_pred chHHHhhhcCEEEeCCChhHHH
Q 003313 588 ATEAARGAADIVLTEPGLSVIC 609 (831)
Q Consensus 588 ~~~~a~~aadivl~~~~~~~i~ 609 (831)
+.+.+++.||+|+.+++-.+++
T Consensus 127 a~~~~k~~Ad~v~~~~~~~G~~ 148 (168)
T 3ewi_A 127 ACSGAQKAVGYICKCSGGRGAI 148 (168)
T ss_dssp CCHHHHTTCSEECSSCTTTTHH
T ss_pred hhHHHHHhCCEEeCCCCCccHH
Confidence 9999999999999988766644
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=1.2e-10 Score=110.96 Aligned_cols=140 Identities=15% Similarity=0.219 Sum_probs=96.6
Q ss_pred CCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCCh-HHHhhccc--eeEEecCCCCCce
Q 003313 311 KTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADP-KEARANIN--EVHFLPFNPVDKR 387 (831)
Q Consensus 311 KTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~-~~~~~~~~--~l~~~~f~s~~k~ 387 (831)
..||+|-|++++.++.. ..+.++++++.+|+..+..++ ||+++|+++++... ........ ..++.+|++..++
T Consensus 13 ~~~tit~gnr~vt~v~~---~~g~~e~elL~lAAs~E~~Se-HPla~AIv~~A~~~~~l~~~~~~~~~~~~~~F~a~~G~ 88 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIP---AQGVDEKTLADAAQLASLADE-TPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRM 88 (156)
T ss_dssp --------CEEEEEEEE---CTTSCHHHHHHHHHHTTSSCC-SHHHHHHHHHHHHHTTCCCCCHHHHTCEEEEEETTTTE
T ss_pred CCCceecCCCeEEEEEe---cCCCCHHHHHHHHHHHhCcCC-CHHHHHHHHHHHHhcCCCcccccccccceeeccccCCC
Confidence 47999999999999763 346789999999999887665 99999999987532 10000000 2345789988886
Q ss_pred EEEEEEcCCCcEEEEEccchHHHhhhccCc-hhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccc
Q 003313 388 TAITYTDSEGNWYRASKGAPEQILNMCQEK-EEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPL 466 (831)
Q Consensus 388 ~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~-~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~ 466 (831)
..+.+ +| ..+.+|+++.|..++... ...+..+.+..++++++|.+++++|.++ +++|++++
T Consensus 89 ~Gv~v---~G--~~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d~-------------~l~GvIal 150 (156)
T 1svj_A 89 SGINI---DN--RMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIAL 150 (156)
T ss_dssp EEEEE---TT--EEEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEE
T ss_pred CeEEE---CC--EEEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEECC-------------EEEEEEEE
Confidence 66643 66 567899987766655321 1233457778889999999999999876 89999999
Q ss_pred cCCCCC
Q 003313 467 FDPPRH 472 (831)
Q Consensus 467 ~D~lr~ 472 (831)
.|++||
T Consensus 151 aD~iK~ 156 (156)
T 1svj_A 151 KDIVKG 156 (156)
T ss_dssp EECCCC
T ss_pred ecCCCC
Confidence 999996
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.1e-10 Score=114.70 Aligned_cols=104 Identities=26% Similarity=0.318 Sum_probs=86.8
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHH
Q 003313 477 TIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKIL 556 (831)
Q Consensus 477 ~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l 556 (831)
+++.|+++|+++.++||+....+..+++++|+. ++... ..|...++.+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~------------------------------~~~~~--~~k~~~l~~~ 94 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP------------------------------VLHGI--DRKDLALKQW 94 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC------------------------------EEESC--SCHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe------------------------------eEeCC--CChHHHHHHH
Confidence 899999999999999999999999999999984 12222 3466666555
Q ss_pred hhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHH
Q 003313 557 QEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 557 ~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i 612 (831)
.++ .+.++|+||+.||.+|++.|+++++++++.+..++.||+++.+++..++.+.+
T Consensus 95 ~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~l 154 (176)
T 3mmz_A 95 CEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTVPGGDGAIREI 154 (176)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHH
T ss_pred HHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHHhCCEEecCCCCCcHHHHH
Confidence 443 46799999999999999999999999999999999999999988866655544
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.4e-10 Score=117.37 Aligned_cols=100 Identities=22% Similarity=0.237 Sum_probs=85.0
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHH
Q 003313 477 TIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKIL 556 (831)
Q Consensus 477 ~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l 556 (831)
+++.|+++|+++.++||++...+..+++++|+.. +|... ..|...++.+
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~-----------------------------~f~~~--k~K~~~l~~~ 132 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH-----------------------------LYQGQ--SDKLVAYHEL 132 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------EECSC--SSHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------hhccc--CChHHHHHHH
Confidence 8999999999999999999999999999999852 23333 4466666665
Q ss_pred hhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhH
Q 003313 557 QEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSV 607 (831)
Q Consensus 557 ~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~ 607 (831)
.++ .+.++|+||+.||.+|++.|+++++++++.+.+++.||+++.+++-.+
T Consensus 133 ~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~~~G 187 (211)
T 3ij5_A 133 LATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKGGRG 187 (211)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTT
T ss_pred HHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCCCCc
Confidence 553 678999999999999999999999999999999999999998875444
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.03 E-value=1.1e-09 Score=115.60 Aligned_cols=71 Identities=27% Similarity=0.365 Sum_probs=60.3
Q ss_pred EeChH--HHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 543 DVFAE--HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 543 ~~~P~--~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
...|. .|...++.+.++ .+.|+++||+.||.+|++.|++|+|||++.+.+|++||+|+.+++-+++.++|+
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 4dw8_A 190 ELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIE 266 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHH
Confidence 44444 577666666543 456999999999999999999999999999999999999999999999998885
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.98 E-value=1.6e-09 Score=115.04 Aligned_cols=66 Identities=18% Similarity=0.208 Sum_probs=58.5
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
.|...++.+.++ .+.|+++||+.||.+|++.|++|+||+++.+.+|+.||+|+.+++-+++.++|+
T Consensus 202 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~ 271 (290)
T 3dnp_A 202 SKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMK 271 (290)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCccHHHHHHH
Confidence 577777666553 356999999999999999999999999999999999999999999999999886
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=6.1e-10 Score=107.74 Aligned_cols=105 Identities=27% Similarity=0.282 Sum_probs=84.8
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHH---
Q 003313 477 TIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIV--- 553 (831)
Q Consensus 477 ~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv--- 553 (831)
+++.|+++|+++.++||++...+..+.+++|+.. .|....| |...+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-----------------------------~~~~~kp--k~~~~~~~ 87 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY-----------------------------LFQGVVD--KLSAAEEL 87 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE-----------------------------EECSCSC--HHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE-----------------------------eecccCC--hHHHHHHH
Confidence 8999999999999999999999999999999853 1222222 44443
Q ss_pred -HHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhH-HHHHH
Q 003313 554 -KILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSV-ICSAV 612 (831)
Q Consensus 554 -~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~-i~~~i 612 (831)
+.+.-..+.++|+||+.||.+|++.|+++++++++.+..++.||+++.+++..+ +.+++
T Consensus 88 ~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~e~~ 148 (164)
T 3e8m_A 88 CNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEGVFREFV 148 (164)
T ss_dssp HHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCCCCCTTTTHHHHHH
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEeccCCCCcHHHHHH
Confidence 333333467999999999999999999999999999999999999999988555 44444
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.91 E-value=1.8e-09 Score=114.55 Aligned_cols=66 Identities=24% Similarity=0.234 Sum_probs=58.8
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
.|...++.+.+. .+.|+++||+.||.+|++.|++|||||+|.+..|+.||+|+.+++-+++.++|+
T Consensus 211 ~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 211 SKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 488777776553 356999999999999999999999999999999999999999999999998886
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.91 E-value=1.7e-09 Score=112.87 Aligned_cols=66 Identities=29% Similarity=0.323 Sum_probs=57.1
Q ss_pred HHHHHHHHHhh----cCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQE----KKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~----~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
+|..-++.+.+ ..+.|+++||+.||.+|++.|++|+|||++.+..|+.||+|+.+++-+++.++++
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~ 252 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLK 252 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHH
Confidence 46655655544 3456999999999999999999999999999999999999999999999999886
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.89 E-value=1.2e-09 Score=115.31 Aligned_cols=66 Identities=24% Similarity=0.257 Sum_probs=47.5
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
+|...++.+.+. .+.++++||+.||.+|++.|++|+||++|.+..|++||+|+.+++-++|.++|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------CHHHHHC
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCccHHHHHHH
Confidence 477777666553 356999999999999999999999999999999999999999999999998874
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.87 E-value=2e-09 Score=114.29 Aligned_cols=146 Identities=18% Similarity=0.167 Sum_probs=101.9
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCC----------CCCcccc-------------C---C
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNM----------YPSSLLL-------------G---R 521 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~----------~~~~~~~-------------~---~ 521 (831)
..+-+.+.++|+++++.|++++++||+....+..+.+++|+.... ...+.+. . .
T Consensus 37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~~l~~~~l~~~~~~~i~~~~~~ 116 (285)
T 3pgv_A 37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRN 116 (285)
T ss_dssp SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSCEEEECCCCHHHHHHHTTTTTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCCEEEecCCCHHHHHHHHHHHhh
Confidence 356778999999999999999999999999999999999985310 0000000 0 0
Q ss_pred c-------------------------------------CCC-------------CCcccHHHH---HH-h----c-----
Q 003313 522 D-------------------------------------KDE-------------NEALPVDEL---IE-K----A----- 538 (831)
Q Consensus 522 ~-------------------------------------~~~-------------~~~~~~~~~---~~-~----~----- 538 (831)
. ... .+.+.+.++ +. . .
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 196 (285)
T 3pgv_A 117 DPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFS 196 (285)
T ss_dssp CTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEES
T ss_pred cCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 0 000 011111111 11 1 1
Q ss_pred -CcEEEeCh--HHHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCE--EEeCCChhHHH
Q 003313 539 -DGFTDVFA--EHKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADI--VLTEPGLSVIC 609 (831)
Q Consensus 539 -~v~~~~~P--~~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadi--vl~~~~~~~i~ 609 (831)
..+.++.| ..|...++.+.+. .+.++++||+.||.+|++.|++|||||||.+.+|++||. ++.+++-+++.
T Consensus 197 ~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~edGva 276 (285)
T 3pgv_A 197 TLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVP 276 (285)
T ss_dssp STTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGGTHHH
T ss_pred CCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCcchHH
Confidence 11234444 3588777777553 356999999999999999999999999999999999984 77788899999
Q ss_pred HHHH
Q 003313 610 SAVL 613 (831)
Q Consensus 610 ~~i~ 613 (831)
++|+
T Consensus 277 ~~i~ 280 (285)
T 3pgv_A 277 RYLR 280 (285)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8886
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.87 E-value=3.9e-09 Score=106.43 Aligned_cols=130 Identities=22% Similarity=0.255 Sum_probs=95.5
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCc---EEE-
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADG---FTD- 543 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---~~~- 543 (831)
-+++|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... . ..+...+ ..+ ++.
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f-~-~~~~~~~---------------~~~~~~~~~~ 136 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAF-S-NTLIVEN---------------DALNGLVTGH 136 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEE-E-EEEEEET---------------TEEEEEEEES
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhc-c-ceeEEeC---------------CEEEeeeccC
Confidence 458899999999999999999999999999999999999985310 0 0000000 000 010
Q ss_pred -eChHHHHHHHHHHhh----cCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHh
Q 003313 544 -VFAEHKYEIVKILQE----KKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTS 615 (831)
Q Consensus 544 -~~P~~K~~iv~~l~~----~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~g 615 (831)
..+..|...++.+.+ ..+.++++||+.||++|++.|+++++| ++.+..++.||+++.++++..+..++.+-
T Consensus 137 ~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~~dl~~~~~~~~~~ 212 (217)
T 3m1y_A 137 MMFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINEPDLALIKPLIEGH 212 (217)
T ss_dssp CCSTTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECSSBGGGGTTC----
T ss_pred CCCCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecccCHHHHHHHhccc
Confidence 123456665555443 346799999999999999999999999 78888999999999999999988877643
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.87 E-value=5.2e-09 Score=117.37 Aligned_cols=136 Identities=19% Similarity=0.195 Sum_probs=105.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEE-----
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTD----- 543 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~----- 543 (831)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.......-.+.+. .+.++
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg-----------------~~tg~~~~~v 318 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDG-----------------TLTGRVVGPI 318 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETT-----------------EEEEEECSSC
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCC-----------------EEEeeEccCC
Confidence 78999999999999999999999999999999999999995310000000000 01111
Q ss_pred eChHHHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhHHHH
Q 003313 544 VFAEHKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTSRTVF 619 (831)
Q Consensus 544 ~~P~~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR~~~ 619 (831)
..+..|.++++.+.++ .+.++|+||+.||.+|++.|++|+++ ++.+..++.||+++..+++.++..++..+|.-+
T Consensus 319 ~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~~ 397 (415)
T 3p96_A 319 IDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFLLGVTRGEI 397 (415)
T ss_dssp CCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHHH
T ss_pred CCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHHH
Confidence 1255677766655443 35799999999999999999999999 778888999999999999999999998888766
Q ss_pred HHH
Q 003313 620 QIM 622 (831)
Q Consensus 620 ~~i 622 (831)
...
T Consensus 398 ~~~ 400 (415)
T 3p96_A 398 EAA 400 (415)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.82 E-value=4.1e-09 Score=110.74 Aligned_cols=67 Identities=24% Similarity=0.249 Sum_probs=58.2
Q ss_pred HHHHHHHHHhh----cCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHH
Q 003313 548 HKYEIVKILQE----KKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLT 614 (831)
Q Consensus 548 ~K~~iv~~l~~----~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~ 614 (831)
.|...++.+.+ ..+.++++||+.||.+|++.|++|||||++.+..|+.||+|+.+++-+++.++++.
T Consensus 200 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 200 HKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp SHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 47666655544 34679999999999999999999999999999999999999999999999998853
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.81 E-value=3.6e-09 Score=114.92 Aligned_cols=146 Identities=16% Similarity=0.137 Sum_probs=99.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCC-----------c--------c
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENE-----------A--------L 529 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~-----------~--------~ 529 (831)
++++++.++++.|++ |+++.++||++...+....+.+++..... ...+...+.. .. . +
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~ 179 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELH-GTEVDFDSIA-VPEGLREELLSIIDVIASLSGEE 179 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEE-EEBCCGGGCC-CCHHHHHHHHHHHHHHHHCCHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhc-ccccchhhhc-cccccceeEEecCHHHHhhhhHH
Confidence 568999999999999 99999999999777777777777632110 0000000000 00 0 0
Q ss_pred cHHHHHHhc------CcEE----EeChHHHHHHHHHHhhcC--CEEEEEcCCccChhhhccC----CeeEEecCchHHHh
Q 003313 530 PVDELIEKA------DGFT----DVFAEHKYEIVKILQEKK--HVVGMTGDGVNDAPALKKA----DIGIAVAGATEAAR 593 (831)
Q Consensus 530 ~~~~~~~~~------~v~~----~~~P~~K~~iv~~l~~~g--~~v~~iGDG~ND~~al~~A----dvgIa~~~~~~~a~ 593 (831)
++ +.+.+. ..+. -..+.+|...++.++... +.|+++|||.||++|++.| ++|||| ++.+.+|
T Consensus 180 ~l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk 257 (332)
T 1y8a_A 180 LF-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYAL 257 (332)
T ss_dssp HH-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHH
T ss_pred HH-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHH
Confidence 11 100000 0011 113567888888665543 5599999999999999999 999999 9999999
Q ss_pred hhcCEEEeCCChhHHHHHH----HHhHHHH
Q 003313 594 GAADIVLTEPGLSVICSAV----LTSRTVF 619 (831)
Q Consensus 594 ~aadivl~~~~~~~i~~~i----~~gR~~~ 619 (831)
+.||+|+.+++.+++..++ ..||..+
T Consensus 258 ~~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~ 287 (332)
T 1y8a_A 258 KHADVVIISPTAMSEAKVIELFMERKERAF 287 (332)
T ss_dssp TTCSEEEECSSTHHHHHHHHHHHHHGGGGG
T ss_pred hhCcEEecCCCCCHHHHHHHHHHHcCCchh
Confidence 9999999999998877765 4566555
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.78 E-value=6.5e-09 Score=111.36 Aligned_cols=67 Identities=25% Similarity=0.206 Sum_probs=59.2
Q ss_pred HHHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 547 EHKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 547 ~~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
..|...++.+.++ .+.|+++||+.||.+|++.|++||||++|.+..|++||+|+.+++-+++.++|+
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 4587777776553 356999999999999999999999999999999999999999999999998886
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=1.5e-08 Score=100.54 Aligned_cols=106 Identities=25% Similarity=0.243 Sum_probs=83.7
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHHH
Q 003313 477 TIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKIL 556 (831)
Q Consensus 477 ~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l 556 (831)
++++|+++|+++.++||++...+..+.+++|+.. +|.... .|...++.+
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~-----------------------------~~~~~k--pk~~~~~~~ 109 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITH-----------------------------LYQGQS--NKLIAFSDL 109 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------EECSCS--CSHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce-----------------------------eecCCC--CCHHHHHHH
Confidence 8999999999999999999999999999999852 122122 244444443
Q ss_pred hh----cCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHH-HHHH
Q 003313 557 QE----KKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVIC-SAVL 613 (831)
Q Consensus 557 ~~----~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~-~~i~ 613 (831)
.+ ..+.++|+||+.||.+|++.|+++++++++.+..++.||+++.+.+-.+++ ++++
T Consensus 110 ~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 110 LEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 32 236799999999999999999999999988888888999999887666666 5443
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.75 E-value=1e-08 Score=110.29 Aligned_cols=127 Identities=18% Similarity=0.162 Sum_probs=94.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEE-----
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTD----- 543 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~----- 543 (831)
+++|++.+.++.|+++|+++.++||.....+..+.+.+|+.... . ..+...+ . ..-.+
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f-~-~~l~~~d-g--------------~~tg~i~~~~ 241 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAF-S-NTVEIRD-N--------------VLTDNITLPI 241 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEE-E-ECEEEET-T--------------EEEEEECSSC
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEE-E-EEEEeeC-C--------------eeeeeEeccc
Confidence 48899999999999999999999999999999999999985310 0 0000000 0 00000
Q ss_pred eChHHHHHHHHHHhh----cCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 544 VFAEHKYEIVKILQE----KKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 544 ~~P~~K~~iv~~l~~----~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
..+..|.+.++.+.+ ..+.++|+||+.||.+|++.|++|+++ ++.+..++.||.++..+++..+..+++
T Consensus 242 ~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 242 MNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp CCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 123456555544433 346799999999999999999999999 577788889999999899998877654
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=1.5e-08 Score=101.25 Aligned_cols=128 Identities=23% Similarity=0.325 Sum_probs=88.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEE-eChH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTD-VFAE 547 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~P~ 547 (831)
++.+++.++++.|++.|+++.++||+....+....+.+|+... .......... .... .+... ..+.
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~----------~~~~~~~~~~ 142 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYA-FANRLIVKDG--KLTG----------DVEGEVLKEN 142 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEE-EEEEEEEETT--EEEE----------EEECSSCSTT
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeE-EEeeeEEECC--EEcC----------CcccCccCCc
Confidence 5678999999999999999999999998888888888887421 0000000000 0000 00000 1234
Q ss_pred HHHHHHHHHhh-c---CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHH
Q 003313 548 HKYEIVKILQE-K---KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICS 610 (831)
Q Consensus 548 ~K~~iv~~l~~-~---g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~ 610 (831)
.|...++.+.+ . .+.++++||+.||.+|++.|+++++|+ +.+..++.||+++.++++..+..
T Consensus 143 ~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 143 AKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-CCHHHHTTCSEEECSSCGGGGGG
T ss_pred cHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-CCHHHHhhcceeecchhHHHHHH
Confidence 67665554433 2 356999999999999999999999998 56677889999998777876643
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.75 E-value=7.3e-09 Score=108.58 Aligned_cols=66 Identities=30% Similarity=0.370 Sum_probs=58.3
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
.|...++.+.++ .+.|+++||+.||.+|++.|++|+||++|.+.+|++||+|+.+++-+++.++++
T Consensus 194 ~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 263 (268)
T 3r4c_A 194 SKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALK 263 (268)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHH
Confidence 577766666553 356999999999999999999999999999999999999999999999999885
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.75 E-value=2.8e-08 Score=101.88 Aligned_cols=146 Identities=21% Similarity=0.215 Sum_probs=102.4
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC--C-------Ccccc-------------------
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY--P-------SSLLL------------------- 519 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~--~-------~~~~~------------------- 519 (831)
..+.+.+.+++++++++|++++++||+....+..+.+.+|+..... + .+.+.
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 3466789999999999999999999999999999999999753111 0 11000
Q ss_pred CCcC--------------C-CCCcccHHHHHHhc----CcE-----EEeChH--HHHHHHHHHhhc----CCEEEEEcCC
Q 003313 520 GRDK--------------D-ENEALPVDELIEKA----DGF-----TDVFAE--HKYEIVKILQEK----KHVVGMTGDG 569 (831)
Q Consensus 520 ~~~~--------------~-~~~~~~~~~~~~~~----~v~-----~~~~P~--~K~~iv~~l~~~----g~~v~~iGDG 569 (831)
+... . ....+.++++.+.. .+. ....|. .|...++.+.++ .+.++++||+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~ 178 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 178 (231)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred CceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC
Confidence 0000 0 00122233333322 111 233333 577777666542 3569999999
Q ss_pred ccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 570 VNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 570 ~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
.||.+|++.|++|++|+++.+..++.||+++.+++-+++.++++
T Consensus 179 ~nD~~~~~~ag~~v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~ 222 (231)
T 1wr8_A 179 ENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIY 222 (231)
T ss_dssp GGGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEecCCCHHHHhhCCEEecCCCcchHHHHHH
Confidence 99999999999999999998888999999998888888888775
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.69 E-value=3.5e-08 Score=95.02 Aligned_cols=110 Identities=24% Similarity=0.224 Sum_probs=87.8
Q ss_pred CCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEe--ChHH
Q 003313 471 RHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDV--FAEH 548 (831)
Q Consensus 471 r~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~P~~ 548 (831)
.+++.+++++|+++|+++.++||.+...+..+.+++|+.. .|... .|+-
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-----------------------------~~~~~kp~~~~ 88 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE-----------------------------IYTGSYKKLEI 88 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE-----------------------------EEECC--CHHH
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh-----------------------------hccCCCCCHHH
Confidence 4567899999999999999999999999999999999852 12111 2222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVIC 609 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~ 609 (831)
-..+++.++-..+.++|+||+.||.+|.+.|++++++.++.+..++.||+++.+.+-.++.
T Consensus 89 ~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 89 YEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECSSCSSSSHH
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhCCEEecCCCCCcHH
Confidence 2334444444456799999999999999999999999888888888999999888777766
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.64 E-value=8.4e-09 Score=102.28 Aligned_cols=117 Identities=21% Similarity=0.301 Sum_probs=89.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcE--EEeCh
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGF--TDVFA 546 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~P 546 (831)
+++|++.+.++.|++.|+++.++|++....+..+ +.+|+... . ....... .++ ....|
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~-~~~~~~~-----------------~~~~~~~~~~ 138 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-A-NRAIFED-----------------GKFQGIRLRF 138 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-E-EEEEEET-----------------TEEEEEECCS
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-e-eeEEeeC-----------------CceECCcCCc
Confidence 7889999999999999999999999988877777 77776421 0 0000000 001 34556
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 547 EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 547 ~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
..|...++.+ ..+.++++||+.||.+|++.|+++++|+++.+ .||+++. ++..+.+.++
T Consensus 139 ~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~----~ad~v~~--~~~el~~~l~ 197 (201)
T 4ap9_A 139 RDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGREIP----GADLLVK--DLKELVDFIK 197 (201)
T ss_dssp SCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT----TCSEEES--SHHHHHHHHH
T ss_pred cCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc----cccEEEc--cHHHHHHHHH
Confidence 7799988888 56679999999999999999999999998776 8999984 5666766654
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.63 E-value=6.3e-08 Score=102.45 Aligned_cols=66 Identities=24% Similarity=0.232 Sum_probs=58.1
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
.|...++.+.+. .+.++++||+.||.+|++.|++|++|+++.+..++.||+++.+++-+++.++++
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 688877777653 356999999999999999999999999999999999999999888899988875
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=8.2e-08 Score=95.96 Aligned_cols=129 Identities=13% Similarity=0.109 Sum_probs=94.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+........++ +.+.. ...-.|+-
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~-~~~~~----------------~~kp~~~~ 132 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVL-GRDEA----------------PPKPHPGG 132 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEE-CTTTS----------------CCTTSSHH
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEE-eCCCC----------------CCCCCHHH
Confidence 35689999999999999999999999999999999999985311001111 11100 11112333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCe-eEEecCchHHHhhhcCEEEeCCChhHHHHHHHHhH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVAGATEAARGAADIVLTEPGLSVICSAVLTSR 616 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Adv-gIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~gR 616 (831)
-..+.+.+.-..+.++++||+.||..|.+.|++ +|+|+++.+..++.||+++ +++..+...++..|
T Consensus 133 ~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~--~~~~el~~~~~~~~ 199 (205)
T 3m9l_A 133 LLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHA--RDCAQLRDLLSAEG 199 (205)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEEC--SSHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEe--CCHHHHHHHHHhcc
Confidence 344555555455679999999999999999999 9999988777788899998 56888888776543
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.53 E-value=1.5e-07 Score=95.98 Aligned_cols=128 Identities=17% Similarity=0.188 Sum_probs=93.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.... ...-.|+-
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~kp~~~~ 165 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRL--TVIAGDDSVE----------------RGKPHPDM 165 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTC--SEEECTTTSS----------------SCTTSSHH
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhe--eeEEeCCCCC----------------CCCCCHHH
Confidence 46789999999999999999999999999999999999975311 1111111110 11112344
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCe---eEEecCc-hHHHhh-hcCEEEeCCChhHHHHHHHHhH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADI---GIAVAGA-TEAARG-AADIVLTEPGLSVICSAVLTSR 616 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Adv---gIa~~~~-~~~a~~-aadivl~~~~~~~i~~~i~~gR 616 (831)
-..+++.+.-..+.++++||+.||+.|++.|++ +|++|++ .+..++ .||+++ +++..+.+.++.++
T Consensus 166 ~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l~~~~ 236 (237)
T 4ex6_A 166 ALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVV--DSFPAAVTAVLDGH 236 (237)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEE--SSHHHHHHHHHHC-
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEE--CCHHHHHHHHHccC
Confidence 455666666566789999999999999999999 8888844 344444 799998 56899998887664
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.49 E-value=1.2e-07 Score=101.21 Aligned_cols=66 Identities=27% Similarity=0.319 Sum_probs=58.0
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEe-CCChhHHHHHHH
Q 003313 548 HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLT-EPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~-~~~~~~i~~~i~ 613 (831)
.|...++.+.+. .+.++++||+.||.+|++.|++|++|+++.+..++.||+++. +++-+++.++++
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 588877777653 246999999999999999999999999999999999999998 888899998885
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.48 E-value=2.2e-07 Score=97.45 Aligned_cols=66 Identities=26% Similarity=0.313 Sum_probs=57.6
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
.|...++.+.+. .+.++++||+.||.+|++.|++|++|+++.+..++.||+++.+++.+++.++++
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 687777776553 356999999999999999999999999999999999999999888899988875
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.48 E-value=1.3e-07 Score=94.81 Aligned_cols=129 Identities=12% Similarity=0.059 Sum_probs=87.1
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC-CCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTN-MYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
+++++.+.++.|++.|+++.++|+.....+..+.+.+|+... ..........+-. ... .......|..
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--------~~~~~~~~~~ 151 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGS---FKE--------LDNSNGACDS 151 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSB---EEE--------EECTTSTTTC
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCc---eec--------cCCCCCCccc
Confidence 779999999999999999999999999999999999998521 1110011000000 000 0011223455
Q ss_pred HHHHHHHH-hhcCCEEEEEcCCccChhhhcc----CCeeEEecCchHHHhhhcCEEEeCCChhHHHHH
Q 003313 549 KYEIVKIL-QEKKHVVGMTGDGVNDAPALKK----ADIGIAVAGATEAARGAADIVLTEPGLSVICSA 611 (831)
Q Consensus 549 K~~iv~~l-~~~g~~v~~iGDG~ND~~al~~----AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~ 611 (831)
|.+.+..+ .-..+.++++||+.||.+|++. +.++++++++.+..++.||+++ +++..+.+.
T Consensus 152 ~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~--~~~~el~~~ 217 (219)
T 3kd3_A 152 KLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVA--RNVAELASL 217 (219)
T ss_dssp HHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEE--SSHHHHHHH
T ss_pred HHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceee--CCHHHHHHh
Confidence 66666444 5567889999999999999975 3444444577788888999998 456666654
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.48 E-value=5.4e-07 Score=90.00 Aligned_cols=127 Identities=16% Similarity=0.115 Sum_probs=94.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEE--EeCh
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFT--DVFA 546 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~P 546 (831)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+... .......+.+. .... .-.|
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~-f~~~~~~~~~~---------------~~~~~~~p~p 131 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTL-LCHKLEIDDSD---------------RVVGYQLRQK 131 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCE-EEEEEEECTTS---------------CEEEEECCSS
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcce-ecceeEEcCCc---------------eEEeeecCCC
Confidence 5789999999999999 99999999999999999999998631 10111111100 0001 1467
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 547 EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 547 ~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
+.|...++.+...+..++|+||+.||++|.+.|++++++....+....+++++. -+++..+...+.
T Consensus 132 ~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~ 197 (206)
T 1rku_A 132 DPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPA-VHTYEDLKREFL 197 (206)
T ss_dssp SHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCE-ECSHHHHHHHHH
T ss_pred chHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEECCcHHHHHHHhhhcc-ccchHHHHHHHH
Confidence 889999999988888999999999999999999999998654444334445532 367888877663
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.41 E-value=8.9e-07 Score=93.20 Aligned_cols=66 Identities=21% Similarity=0.152 Sum_probs=33.1
Q ss_pred HHHHHHHHHhh-----cCCE--EEEEcCCccChhhhccCCeeEEecCch---HHHhhh--cC-EEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQE-----KKHV--VGMTGDGVNDAPALKKADIGIAVAGAT---EAARGA--AD-IVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~-----~g~~--v~~iGDG~ND~~al~~AdvgIa~~~~~---~~a~~a--ad-ivl~~~~~~~i~~~i~ 613 (831)
+|...++.+.+ ..+. ++++||+.||.+|++.|++||+|+++. +..++. || +++.+++-+++.++++
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~ 267 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLD 267 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC------------------------------
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCCchHHHHHHH
Confidence 36555544433 2345 999999999999999999999999887 555543 78 8888888889888775
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.41 E-value=1.4e-06 Score=92.36 Aligned_cols=65 Identities=25% Similarity=0.287 Sum_probs=55.5
Q ss_pred HHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 549 KYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 549 K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
|...++.+.+. .+.++++||+.||.+|++.|++|++|+++.+..++.||+++.+++-+++.++++
T Consensus 217 K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 217 KGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred hHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhCceeecCCCcChHHHHHH
Confidence 55555555442 346999999999999999999999999999999999999999888999998886
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=7.1e-07 Score=92.97 Aligned_cols=64 Identities=22% Similarity=0.247 Sum_probs=54.4
Q ss_pred HHHHHHHHHHhhc-C-----CEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 547 EHKYEIVKILQEK-K-----HVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 547 ~~K~~iv~~l~~~-g-----~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
.+|...++.+.++ | ..++++||+.||.+|++.|++|++|+|+.+ . +++++..+++-+++.++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh-c--CCcEEeCCCCchHHHHHHH
Confidence 4677777777653 3 679999999999999999999999999988 4 7889998888888888775
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=2.2e-06 Score=84.01 Aligned_cols=136 Identities=16% Similarity=0.266 Sum_probs=86.8
Q ss_pred CccccCceEEEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHH--hhccceeEEecCCCCCceEEE
Q 003313 313 AALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKEA--RANINEVHFLPFNPVDKRTAI 390 (831)
Q Consensus 313 GTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~--~~~~~~l~~~~f~s~~k~~sv 390 (831)
||||+|+++|.++..-....+.+.++++.+++..+..++ ||+++||++++...... .......+..| .+.+..
T Consensus 1 GTLT~G~p~V~~v~~~~~~~~~~~~~lL~laaa~E~~Se-HPlA~AIv~~a~~~~~~~~~~~~~~f~~i~----G~Gv~~ 75 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTESNRISHHKILAIVGTAESNSE-HPLGTAITKYCKQELDTETLGTCIDFQVVP----GCGISC 75 (185)
T ss_dssp CCCCSCCCEEEEEEECSCTTTSCHHHHHHHHHHGGGSSS-CHHHHHHHHHHHHHHTCSCCCCCBCCEEET----TTEEEE
T ss_pred CCCcCCcEEEEEEEecCCcCCCCHHHHHHHHHHHHccCC-CHHHHHHHHHHHhhcCCCCCCCccceEEec----cceEEE
Confidence 899999999998763111124578889999988888776 99999999987421000 01112222222 122333
Q ss_pred EEEcCCC-----------------------------------------------cEEEEEccchHHHhhhccCchhhHHH
Q 003313 391 TYTDSEG-----------------------------------------------NWYRASKGAPEQILNMCQEKEEIGGK 423 (831)
Q Consensus 391 ~v~~~~g-----------------------------------------------~~~~~~kGa~e~i~~~~~~~~~~~~~ 423 (831)
.+...++ +.+.+..|+++++.+..- .+++.
T Consensus 76 ~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi---~i~~~ 152 (185)
T 2kmv_A 76 KVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGL---VINND 152 (185)
T ss_dssp EECCSGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHHHHHHHTC---CCCHH
T ss_pred EECCccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHHHHHHcCC---CCCHH
Confidence 3322000 115778899998765221 12234
Q ss_pred HHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCC
Q 003313 424 VHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDP 469 (831)
Q Consensus 424 ~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~ 469 (831)
..+.+.++..+|..++.+|.++ .++|++++.|+
T Consensus 153 ~~~~~~~~~~~G~T~V~vaidg-------------~l~g~iavaD~ 185 (185)
T 2kmv_A 153 VNDFMTEHERKGRTAVLVAVDD-------------ELCGLIAIADT 185 (185)
T ss_dssp HHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEECC
T ss_pred HHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEEEcC
Confidence 4556677788999999999876 89999999995
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.32 E-value=6.4e-07 Score=90.47 Aligned_cols=127 Identities=10% Similarity=0.084 Sum_probs=89.8
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
-++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++...... ...-.|+
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~kp~~~ 146 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYF--DAIVGSSLDG----------------KLSTKED 146 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECTTS----------------SSCSHHH
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhe--eeeeccCCCC----------------CCCCCHH
Confidence 357899999999999999999999999999999999999985311 1111111000 0011222
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCe---eEEecCchHH--HhhhcCEEEeCCChhHHHHHHHH
Q 003313 548 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI---GIAVAGATEA--ARGAADIVLTEPGLSVICSAVLT 614 (831)
Q Consensus 548 ~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Adv---gIa~~~~~~~--a~~aadivl~~~~~~~i~~~i~~ 614 (831)
--..+.+.++-..+.++++||+.||+.|.+.|++ ++++|++... .+..||+++ +++..+...+..
T Consensus 147 ~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~s~~el~~~~~~ 216 (226)
T 3mc1_A 147 VIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIV--NSVDELHKKILE 216 (226)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEE--SSHHHHHHHHHT
T ss_pred HHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEE--CCHHHHHHHHHH
Confidence 2344455555455689999999999999999999 8888854433 357899998 568888877754
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.30 E-value=1.2e-06 Score=91.24 Aligned_cols=127 Identities=13% Similarity=0.111 Sum_probs=87.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.|++.|+++.++|++....+..+.+.+|+..... ..++.+.... ...-.|+-
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~----------------~~kp~~~~ 165 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP-DFLVTPDDVP----------------AGRPYPWM 165 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC-SCCBCGGGSS----------------CCTTSSHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccCh-HheecCCccC----------------CCCCCHHH
Confidence 467899999999999999999999999888888888887642210 1111111100 01112444
Q ss_pred HHHHHHHHhhcC-CEEEEEcCCccChhhhccCC---eeEEecCc------------------------hHHHhhh-cCEE
Q 003313 549 KYEIVKILQEKK-HVVGMTGDGVNDAPALKKAD---IGIAVAGA------------------------TEAARGA-ADIV 599 (831)
Q Consensus 549 K~~iv~~l~~~g-~~v~~iGDG~ND~~al~~Ad---vgIa~~~~------------------------~~~a~~a-adiv 599 (831)
-..+++.+.-.. +.++++||+.||..|++.|+ +++++|++ .+..++. ||++
T Consensus 166 ~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 245 (267)
T 1swv_A 166 CYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFT 245 (267)
T ss_dssp HHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCcee
Confidence 455666666555 68999999999999999999 66777754 2333444 9999
Q ss_pred EeCCChhHHHHHHHH
Q 003313 600 LTEPGLSVICSAVLT 614 (831)
Q Consensus 600 l~~~~~~~i~~~i~~ 614 (831)
+ +++..+...+..
T Consensus 246 ~--~~~~el~~~l~~ 258 (267)
T 1swv_A 246 I--ETMQELESVMEH 258 (267)
T ss_dssp E--SSGGGHHHHHHH
T ss_pred c--cCHHHHHHHHHH
Confidence 8 567888777643
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.29 E-value=7.3e-07 Score=92.40 Aligned_cols=54 Identities=24% Similarity=0.241 Sum_probs=44.7
Q ss_pred HHHHHHHHHhhc-----CCEEEEEcCCccChhhhccCCeeEEecCch-HHHhhhcCEEEe
Q 003313 548 HKYEIVKILQEK-----KHVVGMTGDGVNDAPALKKADIGIAVAGAT-EAARGAADIVLT 601 (831)
Q Consensus 548 ~K~~iv~~l~~~-----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~-~~a~~aadivl~ 601 (831)
+|..-++.+.+. .+.|+++||+.||.+||+.|++|||||++. +..++.||+++.
T Consensus 179 sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~ 238 (249)
T 2zos_A 179 DKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDV 238 (249)
T ss_dssp CHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHH
T ss_pred ChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEec
Confidence 487777666543 357999999999999999999999999988 667788887754
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.28 E-value=1.4e-06 Score=88.18 Aligned_cols=127 Identities=20% Similarity=0.243 Sum_probs=85.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC-CCCCCccccCCcCCCCCcccHHHHHHhcCcEEE----
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGT-NMYPSSLLLGRDKDENEALPVDELIEKADGFTD---- 543 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---- 543 (831)
+++|++.++++.|+++|+++.++|+.....+..+.+.+|+.. +..... +.-. .+ ..+.+.
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~-~~~~-~~-------------~~~~~~~~~~ 150 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANR-LKFY-FN-------------GEYAGFDETQ 150 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEEC-EEEC-TT-------------SCEEEECTTS
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeee-EEEc-CC-------------CcEecCCCCC
Confidence 678999999999999999999999999999999999999853 111000 0000 00 000111
Q ss_pred --eChHHHHHHHHHHhhc-C-CEEEEEcCCccChhhhccCCeeEEecCc--hHHHhhhcCEEEeCCChhHHHHHH
Q 003313 544 --VFAEHKYEIVKILQEK-K-HVVGMTGDGVNDAPALKKADIGIAVAGA--TEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 544 --~~P~~K~~iv~~l~~~-g-~~v~~iGDG~ND~~al~~AdvgIa~~~~--~~~a~~aadivl~~~~~~~i~~~i 612 (831)
+.+..|...++.+.++ | +.++++||+.||..|.+.|+++|+++.+ .+.....+|+++ +++..+...+
T Consensus 151 ~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 223 (225)
T 1nnl_A 151 PTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYI--TDFVELLGEL 223 (225)
T ss_dssp GGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEE--SCGGGGCC--
T ss_pred cccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeee--cCHHHHHHHH
Confidence 1123566666555432 3 5799999999999999999999888743 334455789988 4466655443
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.27 E-value=1.2e-06 Score=87.95 Aligned_cols=122 Identities=13% Similarity=0.136 Sum_probs=86.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.+++.|+++.++|+..........+.+|+.... ..++...... ...-.|+-
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~----------------~~kp~~~~ 155 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF--DALASAEKLP----------------YSKPHPQV 155 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEECTTSS----------------CCTTSTHH
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhC--cEEEeccccC----------------CCCCChHH
Confidence 45689999999999999999999999988888888888874211 1111111100 00112334
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe----cCchHHHhhhcCEEEeCCChhHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV----AGATEAARGAADIVLTEPGLSVICS 610 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~----~~~~~~a~~aadivl~~~~~~~i~~ 610 (831)
-..+.+.++-..+.++++||+.||.+|++.|++++++ +++.+..+..||+++. ++..+..
T Consensus 156 ~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~--~~~el~~ 219 (226)
T 1te2_A 156 YLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLS--SLTELTA 219 (226)
T ss_dssp HHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECS--CGGGCCH
T ss_pred HHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEEC--CHHHHhH
Confidence 4555666655567799999999999999999999999 5555566788999984 3544443
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.26 E-value=7.5e-07 Score=89.43 Aligned_cols=122 Identities=5% Similarity=-0.078 Sum_probs=83.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.+++.|+++.++|++ ..+..+.+.+|+.... ..++.+.+.. ...-.|+-
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~Kp~~~~ 150 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYF--DAIADPAEVA----------------ASKPAPDI 150 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGC--SEECCTTTSS----------------SCTTSSHH
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHc--ceEeccccCC----------------CCCCChHH
Confidence 46789999999999999999999998 3455667777874210 1111111110 01112333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSA 611 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~ 611 (831)
-..+.+.+.-..+.++++||+.||.+|++.|+++++|.++.+..+ .||+++.+.+-.++..+
T Consensus 151 ~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~-~a~~v~~~~~el~~~~~ 212 (221)
T 2wf7_A 151 FIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLG-DDIVIVPDTSHYTLEFL 212 (221)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHC-SSSEEESSGGGCCHHHH
T ss_pred HHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhc-cccchhcCHHhCCHHHH
Confidence 344555555555679999999999999999999999998877777 89999866544344443
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.24 E-value=2.9e-06 Score=86.28 Aligned_cols=106 Identities=17% Similarity=0.122 Sum_probs=76.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEE-----E
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFT-----D 543 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-----~ 543 (831)
.++|++.+.++.|++.|+++.++||.....+..+++.+|+..- .......... .... .
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~----------------~~~g~~~~~~ 154 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHL-IATDPEYRDG----------------RYTGRIEGTP 154 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEE-EECEEEEETT----------------EEEEEEESSC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEE-EEcceEEECC----------------EEeeeecCCC
Confidence 4789999999999999999999999999999999999998521 0000000000 0011 1
Q ss_pred eChHHHHHHHHHHhh-cC------CEEEEEcCCccChhhhccCCeeEEecCchHH
Q 003313 544 VFAEHKYEIVKILQE-KK------HVVGMTGDGVNDAPALKKADIGIAVAGATEA 591 (831)
Q Consensus 544 ~~P~~K~~iv~~l~~-~g------~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~ 591 (831)
+.+..|...++.+.+ .| +.+.++||+.||.+|++.|++++++......
T Consensus 155 ~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~~~l 209 (232)
T 3fvv_A 155 SFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGL 209 (232)
T ss_dssp SSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCCHHH
T ss_pred CcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcCHHH
Confidence 224567766654433 34 6799999999999999999999999754433
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.24 E-value=8.2e-07 Score=89.94 Aligned_cols=127 Identities=12% Similarity=0.017 Sum_probs=88.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+.... ..++.+.+.. ...-.|+-
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~kp~~~~ 152 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINK--INIVTRDDVS----------------YGKPDPDL 152 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTS--SCEECGGGSS----------------CCTTSTHH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhh--heeeccccCC----------------CCCCChHH
Confidence 45789999999999999999999999999999999999985321 1111111110 11112233
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCe---eEEec-CchHHHhhh-cCEEEeCCChhHHHHHHHHh
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADI---GIAVA-GATEAARGA-ADIVLTEPGLSVICSAVLTS 615 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Adv---gIa~~-~~~~~a~~a-adivl~~~~~~~i~~~i~~g 615 (831)
-..+.+.+.-..+.++++||+.||..|.+.|++ ++++| ++.+..++. ||+++ +++..+...++..
T Consensus 153 ~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~--~~~~el~~~l~~~ 222 (233)
T 3s6j_A 153 FLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVY--EDPLDLLNHLDEI 222 (233)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEE--SSHHHHHHTGGGT
T ss_pred HHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEE--CCHHHHHHHHHHH
Confidence 334445554445679999999999999999999 55566 445555554 99998 5688888877544
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.22 E-value=2.8e-06 Score=86.24 Aligned_cols=123 Identities=11% Similarity=0.029 Sum_probs=79.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.|++.|+++.++|+... +..+.+.+|+.... ..++.+.+. ....-.|+-
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f--~~i~~~~~~----------------~~~Kp~~~~ 151 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDF--HAIVDPTTL----------------AKGKPDPDI 151 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTC--SEECCC-------------------------CCH
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhc--CEEeeHhhC----------------CCCCCChHH
Confidence 3678999999999999999999999755 67778888875321 111111100 011112223
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i 612 (831)
-..+++.+.-..+.++|+||+.||+.|.+.|+++++|.++.+..+ .||+++.+.+--.+..++
T Consensus 152 ~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~-~ad~v~~s~~el~~~~~~ 214 (233)
T 3nas_A 152 FLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPML-GADLVVRQTSDLTLELLH 214 (233)
T ss_dssp HHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC--------CSEECSSGGGCCHHHHH
T ss_pred HHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccccc-cCCEEeCChHhCCHHHHH
Confidence 355666666566789999999999999999999999987766666 899998654433333443
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.15 E-value=1.6e-06 Score=87.03 Aligned_cols=123 Identities=15% Similarity=0.064 Sum_probs=81.2
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHH
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHK 549 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K 549 (831)
+.+++.+.++.+++.|+++.++|+..........+.+|+.... ...+...... ...-.|+--
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----------------~~k~~~~~~ 151 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWF--DIIIGGEDVT----------------HHKPDPEGL 151 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCC--SEEECGGGCS----------------SCTTSTHHH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhe--eeeeehhhcC----------------CCCCChHHH
Confidence 4689999999999999999999999988888888888875321 1111111000 000112223
Q ss_pred HHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe----cCchHHHhhh-cCEEEeCCChhHHHHHH
Q 003313 550 YEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV----AGATEAARGA-ADIVLTEPGLSVICSAV 612 (831)
Q Consensus 550 ~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~----~~~~~~a~~a-adivl~~~~~~~i~~~i 612 (831)
..+++.+.-..+.++++||+.||.+|++.|++++++ +++.+..++. ||+++. ++..+...+
T Consensus 152 ~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l 217 (225)
T 3d6j_A 152 LLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIIS--TLGQLISVP 217 (225)
T ss_dssp HHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEES--SGGGGC---
T ss_pred HHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEEC--CHHHHHHhh
Confidence 344555554456799999999999999999999887 3444444544 899984 455555544
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.15 E-value=1.3e-06 Score=92.37 Aligned_cols=131 Identities=17% Similarity=0.170 Sum_probs=89.8
Q ss_pred CCCCChHHHHHHHHhC-CCeEEEEcCC---------------------CHHHHHHHHHHhCCCCCCCCCccccCCcCCCC
Q 003313 469 PPRHDSSDTIHRALKL-GVCVKMITGD---------------------HLAIAKETGRRLGIGTNMYPSSLLLGRDKDEN 526 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~-Gi~v~m~TGD---------------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~ 526 (831)
..++++.+.++.+++. |+++.+.|.. ....+..+.+..|+...........+..
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~---- 197 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDP---- 197 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCC----
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCC----
Confidence 4567899999999988 9999888876 3344455555566531100000000000
Q ss_pred CcccHHHHHHhcCcEEEeCh--HHHHHHHHHHhh----cCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEE
Q 003313 527 EALPVDELIEKADGFTDVFA--EHKYEIVKILQE----KKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVL 600 (831)
Q Consensus 527 ~~~~~~~~~~~~~v~~~~~P--~~K~~iv~~l~~----~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl 600 (831)
....+....| ..|...++.+.+ ..+.++++||+.||.+|++.|++|++|+++.+..++.||+++
T Consensus 198 ----------~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v~ 267 (289)
T 3gyg_A 198 ----------EDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLIT 267 (289)
T ss_dssp ----------TTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCCBC
T ss_pred ----------CCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCEEc
Confidence 0002333333 346666655544 235699999999999999999999999999999999999999
Q ss_pred eCCChhHHHHHHH
Q 003313 601 TEPGLSVICSAVL 613 (831)
Q Consensus 601 ~~~~~~~i~~~i~ 613 (831)
.+++-.++.++++
T Consensus 268 ~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 268 DSEYSKGITNTLK 280 (289)
T ss_dssp SSCHHHHHHHHHH
T ss_pred CCCCcCHHHHHHH
Confidence 9888888888875
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.13 E-value=1.9e-06 Score=87.40 Aligned_cols=126 Identities=7% Similarity=-0.019 Sum_probs=92.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++...+.. ...-.|+-
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~kp~~~~ 160 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLF--DHVLSVDAVR----------------LYKTAPAA 160 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTC--SEEEEGGGTT----------------CCTTSHHH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhc--CEEEEecccC----------------CCCcCHHH
Confidence 46789999999999999999999999999888888889885321 1111111000 11112333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe----cCchHHHhhhcCEEEeCCChhHHHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV----AGATEAARGAADIVLTEPGLSVICSAVLT 614 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~----~~~~~~a~~aadivl~~~~~~~i~~~i~~ 614 (831)
-..+.+.+.-..+.++++||+.||+.|.+.|++++++ +++.+..+..+|+++ +++..+...+..
T Consensus 161 ~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~--~~~~el~~~l~~ 228 (233)
T 3umb_A 161 YALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAG--HDMRDLLQFVQA 228 (233)
T ss_dssp HTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEE--SSHHHHHHHHHC
T ss_pred HHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEE--CCHHHHHHHHHH
Confidence 3445556655567799999999999999999999999 555555677899998 568888887754
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.09 E-value=2.3e-06 Score=88.02 Aligned_cols=122 Identities=15% Similarity=0.125 Sum_probs=85.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+.. ...-.|+-
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~~----------------~~Kp~~~~ 175 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF--SEMLGGQSLP----------------EIKPHPAP 175 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTTSS----------------SCTTSSHH
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheE--EEEEecccCC----------------CCCcCHHH
Confidence 56789999999999999999999999999999999999985311 1111111110 00112344
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEE-ecC----chHHHhhhcCEEEeCCChhHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA-VAG----ATEAARGAADIVLTEPGLSVICS 610 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa-~~~----~~~~a~~aadivl~~~~~~~i~~ 610 (831)
-..+++.+.-..+.++++||+.||++|.+.|++++. +.. +.+..+..+|+++ +++..+..
T Consensus 176 ~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi--~~~~el~~ 240 (243)
T 2hsz_A 176 FYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILK 240 (243)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGG
T ss_pred HHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEE--CCHHHHHH
Confidence 455666666556779999999999999999999854 332 3344567899998 44655543
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.09 E-value=2.8e-06 Score=86.76 Aligned_cols=124 Identities=15% Similarity=0.092 Sum_probs=85.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++...... ...-.|+-
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~kp~~~~ 171 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYF--KYIAGSNLDG----------------TRVNKNEV 171 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECTTS----------------CCCCHHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhE--EEEEeccccC----------------CCCCCHHH
Confidence 46799999999999999999999999999999999999985311 1111111000 00111222
Q ss_pred HHHHHHHHhhc-CCEEEEEcCCccChhhhccCCe---eEEecCchHH--HhhhcCEEEeCCChhHHHHHH
Q 003313 549 KYEIVKILQEK-KHVVGMTGDGVNDAPALKKADI---GIAVAGATEA--ARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 549 K~~iv~~l~~~-g~~v~~iGDG~ND~~al~~Adv---gIa~~~~~~~--a~~aadivl~~~~~~~i~~~i 612 (831)
-..+.+.+.-. .+.++++||+.||+.|.+.|++ ++++|++... .+..||+++. ++..+.+.+
T Consensus 172 ~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~l 239 (240)
T 3sd7_A 172 IQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVE--NVESIKDIL 239 (240)
T ss_dssp HHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEES--SSTTHHHHH
T ss_pred HHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEEC--CHHHHHHHh
Confidence 23445555555 6679999999999999999999 6666654433 3578999984 566666543
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.08 E-value=2.8e-06 Score=85.90 Aligned_cols=124 Identities=12% Similarity=0.118 Sum_probs=88.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++...+.. ...-.|+-
T Consensus 96 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~kp~~~~ 157 (230)
T 3um9_A 96 TPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSF--DHLISVDEVR----------------LFKPHQKV 157 (230)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGC--SEEEEGGGTT----------------CCTTCHHH
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhc--ceeEehhhcc----------------cCCCChHH
Confidence 56789999999999999999999999999899999999985311 1111111000 01112333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe----cCchHHHhhhcCEEEeCCChhHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV----AGATEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~----~~~~~~a~~aadivl~~~~~~~i~~~i 612 (831)
-..+.+.+.-..+.++++||+.||+.|.+.|++++++ +++.+..+..+|+++ +++..+...+
T Consensus 158 ~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 223 (230)
T 3um9_A 158 YELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVV--SDVGVLASRF 223 (230)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEE--SSHHHHHHTC
T ss_pred HHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEe--CCHHHHHHHH
Confidence 3445555555557799999999999999999999999 445555567899998 4577776554
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.08 E-value=7.9e-07 Score=97.81 Aligned_cols=109 Identities=13% Similarity=0.113 Sum_probs=75.3
Q ss_pred cCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEE---
Q 003313 467 FDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTD--- 543 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--- 543 (831)
...++|++++.|+.||++|++|+++||.....++.+|+++|+.-+.-+ ..+.|..+...++. ....+
T Consensus 219 gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~-~~Vig~~l~~~~dG---------~~tg~~~~ 288 (385)
T 4gxt_A 219 GIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKE-EKVLGLRLMKDDEG---------KILPKFDK 288 (385)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCG-GGEEEECEEECTTC---------CEEEEECT
T ss_pred CceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCc-ceEEEeEEEEecCC---------ceeeeecC
Confidence 345789999999999999999999999999999999999987533222 22223222111110 01111
Q ss_pred ----eChHHHHHHHHHHhhc---CCEEEEEcCCccChhhhcc-CCeeEEe
Q 003313 544 ----VFAEHKYEIVKILQEK---KHVVGMTGDGVNDAPALKK-ADIGIAV 585 (831)
Q Consensus 544 ----~~P~~K~~iv~~l~~~---g~~v~~iGDG~ND~~al~~-AdvgIa~ 585 (831)
+..+.|...++.+-+. ...++++|||.||.+||++ +|.++++
T Consensus 289 ~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 289 DFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp TSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred ccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 3457899999876432 2357888999999999985 5555554
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.06 E-value=8.9e-06 Score=82.34 Aligned_cols=124 Identities=19% Similarity=0.115 Sum_probs=88.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.|++. +++.++|+.....+....+.+|+.... ..++... .. -...-.|+-
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f--~~~~~~~-----------~~-----~~~kp~~~~ 160 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLF--DSITTSE-----------EA-----GFFKPHPRI 160 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEHH-----------HH-----TBCTTSHHH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHc--ceeEecc-----------cc-----CCCCcCHHH
Confidence 5679999999999999 999999999999888888999874310 0111000 00 011112333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCc-cChhhhccCC---eeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGV-NDAPALKKAD---IGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~-ND~~al~~Ad---vgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
-..+.+.+.-..+.++++||+. ||+.|.+.|+ +++++|++.+..++.||+++ +++..+...++
T Consensus 161 ~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~--~~~~el~~~l~ 227 (234)
T 3u26_A 161 FELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (234)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEE--SSTHHHHHHHH
T ss_pred HHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEee--CCHHHHHHHHH
Confidence 3455555555567899999997 9999999999 67777877777777999998 55787777664
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.06 E-value=6.3e-06 Score=84.37 Aligned_cols=126 Identities=15% Similarity=0.095 Sum_probs=83.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.|++.|+++.++|+.....+....+. |+........++.+.+.. ...-.|+-
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~----------------~~kp~~~~ 171 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVK----------------YGKPNPEP 171 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCS----------------SCTTSSHH
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCC----------------CCCCChHH
Confidence 5679999999999999999999999987777776666 775321001122221111 11112333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCee-EEecCch----HHHhhhcCEEEeCCChhHHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG-IAVAGAT----EAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg-Ia~~~~~----~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
-..+.+.+.-..+.++++||+.||+.|.+.|+++ +.+.+|. +..+..||+++ +++..+...++
T Consensus 172 ~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~s~~el~~~l~ 239 (243)
T 3qxg_A 172 YLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLF--PSMQTLCDSWD 239 (243)
T ss_dssp HHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEE--SCHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 3445555555556799999999999999999985 4444332 22334699998 56887777664
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.06 E-value=2.6e-06 Score=84.09 Aligned_cols=119 Identities=13% Similarity=0.072 Sum_probs=82.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
.+++++.+.++.|++.|+++.++|++...... ..+.+|+.... ..++...+.. ...-.|+-
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f--~~~~~~~~~~----------------~~Kp~~~~ 145 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYF--TEILTSQSGF----------------VRKPSPEA 145 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGE--EEEECGGGCC----------------CCTTSSHH
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhe--eeEEecCcCC----------------CCCCCcHH
Confidence 36799999999999999999999999988777 77888874210 0111110000 00111333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCee-EEecCchHHHhhhcCEEEeCCChhHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG-IAVAGATEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg-Ia~~~~~~~a~~aadivl~~~~~~~i~~~i 612 (831)
-..+.+.++-..+.++++||+.||.+|++.|+++ ++|++|. . .||+++ +++..+.+.+
T Consensus 146 ~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~---~a~~v~--~~~~el~~~l 204 (207)
T 2go7_A 146 ATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y---EGNHRI--QALADISRIF 204 (207)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C---TTEEEC--SSTTHHHHHT
T ss_pred HHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C---CCCEEe--CCHHHHHHHH
Confidence 3456666665566799999999999999999997 8888776 2 688887 4566665543
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.04 E-value=5.8e-06 Score=83.62 Aligned_cols=124 Identities=15% Similarity=0.085 Sum_probs=87.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+.. ...-.|+-
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~----------------~~Kp~~~~ 144 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYF--DLIVGGDTFG----------------EKKPSPTP 144 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTSSC----------------TTCCTTHH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHh--eEEEecCcCC----------------CCCCChHH
Confidence 46899999999999999999999999999899999999974211 1111111100 11123444
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCee-EEecCc--hHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG-IAVAGA--TEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg-Ia~~~~--~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
...+++.+.-..+.++++||+.||++|.+.|+++ |++..| .... ..+|+++ +++..+...+.
T Consensus 145 ~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~--~~~~el~~~l~ 209 (222)
T 2nyv_A 145 VLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTL--SRPSDLVKLMD 209 (222)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEE--SSTTHHHHHHH
T ss_pred HHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEE--CCHHHHHHHHH
Confidence 4556666665567799999999999999999988 666432 2222 5688887 45777777664
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.04 E-value=5.4e-06 Score=83.85 Aligned_cols=124 Identities=10% Similarity=0.060 Sum_probs=83.8
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeCh
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDH---LAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFA 546 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~---~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P 546 (831)
+.+++.+.++.|++.|+++.++|+.. ........+.+|+.... ..++...+.. ...-.|
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~kp~~ 161 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI--DKTFFADEVL----------------SYKPRK 161 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGC--SEEEEHHHHT----------------CCTTCH
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHh--hhheeccccC----------------CCCCCH
Confidence 47899999999999999999999999 88888888888874311 1111100000 001122
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCc-cChhhhccCCeeEEe---cCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 547 EHKYEIVKILQEKKHVVGMTGDGV-NDAPALKKADIGIAV---AGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 547 ~~K~~iv~~l~~~g~~v~~iGDG~-ND~~al~~AdvgIa~---~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
+--..+.+.+.-..+.++++||+. ||..|.+.|++++++ +++.+..+..+|+++ +++..+...++
T Consensus 162 ~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 230 (235)
T 2om6_A 162 EMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEI--PSIANLKDVIE 230 (235)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEE--SSGGGHHHHHH
T ss_pred HHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchH--hhHHHHHHHHH
Confidence 222344455544456799999999 999999999999999 433333345678877 55777776653
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.03 E-value=7.1e-06 Score=79.91 Aligned_cols=126 Identities=13% Similarity=0.071 Sum_probs=82.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHhC--CCCCCCCCccccCCcCCCCCcccH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHL---------------AIAKETGRRLG--IGTNMYPSSLLLGRDKDENEALPV 531 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~---------------~~a~~ia~~~g--i~~~~~~~~~~~~~~~~~~~~~~~ 531 (831)
++.|++.+++++|+++|+++.++|+... ..+....+.+| +..-.. .......+..
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-~~~~~~~~~~------- 98 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFM-CPHGPDDGCA------- 98 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEE-ECCCTTSCCS-------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEE-cCCCCCCCCC-------
Confidence 5779999999999999999999999985 55666677777 321000 0000000000
Q ss_pred HHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCe---eEEecCchHHHh----hhcCEEEeCCC
Q 003313 532 DELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI---GIAVAGATEAAR----GAADIVLTEPG 604 (831)
Q Consensus 532 ~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Adv---gIa~~~~~~~a~----~aadivl~~~~ 604 (831)
...-.|+-=..+.+.+.-..+.++|+||+.||..|.++|++ +++.|.+..... ..+|+++ ++
T Consensus 99 ---------~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~--~~ 167 (179)
T 3l8h_A 99 ---------CRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVC--ED 167 (179)
T ss_dssp ---------SSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEE--SS
T ss_pred ---------CCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEe--cC
Confidence 01112222244555555556779999999999999999995 666676555444 4579988 55
Q ss_pred hhHHHHHHH
Q 003313 605 LSVICSAVL 613 (831)
Q Consensus 605 ~~~i~~~i~ 613 (831)
+..+.+.+.
T Consensus 168 l~el~~~l~ 176 (179)
T 3l8h_A 168 LAAVAEQLL 176 (179)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 887777664
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.03 E-value=8.5e-06 Score=83.23 Aligned_cols=127 Identities=11% Similarity=0.000 Sum_probs=81.5
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
.++.+++.+.++.|++.|+++.++|+.....+....+. |+........++.+.+.. ...-.|+
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~----------------~~kp~~~ 169 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVK----------------YGKPNPE 169 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCS----------------SCTTSSH
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCC----------------CCCCCCH
Confidence 35679999999999999999999999988777777776 775321001112111110 1112233
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCee-EEecCc--h--HHHhhhcCEEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG-IAVAGA--T--EAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg-Ia~~~~--~--~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
--..+.+.+.-..+.++++||+.||+.|.+.|+++ +.+.+| . +..+..||+++ +++..+...+.
T Consensus 170 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~~~~el~~~l~ 238 (247)
T 3dv9_A 170 PYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLF--HSMPDFNKNWE 238 (247)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 34455566655567799999999999999999975 344332 2 22334799998 55777776664
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.03 E-value=1e-05 Score=84.25 Aligned_cols=126 Identities=12% Similarity=0.063 Sum_probs=86.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..++.+.+.. ...-.|+-
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~----------------~~kp~~~~ 173 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTP-ASTVFATDVV----------------RGRPFPDM 173 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCC-SEEECGGGSS----------------SCTTSSHH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCC-ceEecHHhcC----------------CCCCCHHH
Confidence 567899999999999999999999999988888888888643211 1111111100 01112233
Q ss_pred HHHHHHHHhhcC-CEEEEEcCCccChhhhccCC---eeEEecC------------------------chHHHhh-hcCEE
Q 003313 549 KYEIVKILQEKK-HVVGMTGDGVNDAPALKKAD---IGIAVAG------------------------ATEAARG-AADIV 599 (831)
Q Consensus 549 K~~iv~~l~~~g-~~v~~iGDG~ND~~al~~Ad---vgIa~~~------------------------~~~~a~~-aadiv 599 (831)
-..+.+.+.-.. +.++++||+.||+.|.+.|+ |+|++|. +.+..++ .+|++
T Consensus 174 ~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v 253 (277)
T 3iru_A 174 ALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYV 253 (277)
T ss_dssp HHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEE
Confidence 345556666566 78999999999999999999 5666663 2333343 49999
Q ss_pred EeCCChhHHHHHHH
Q 003313 600 LTEPGLSVICSAVL 613 (831)
Q Consensus 600 l~~~~~~~i~~~i~ 613 (831)
+ +++..+...+.
T Consensus 254 ~--~~~~el~~~l~ 265 (277)
T 3iru_A 254 I--DSVADLETVIT 265 (277)
T ss_dssp E--SSGGGTHHHHH
T ss_pred e--cCHHHHHHHHH
Confidence 8 56888877774
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.02 E-value=8.9e-06 Score=82.38 Aligned_cols=122 Identities=8% Similarity=0.037 Sum_probs=83.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+.... ..++...+.. ...-.|+-
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~----------------~~Kp~~~~ 164 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYF--DSIIGSGDTG----------------TIKPSPEP 164 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEETSSS----------------CCTTSSHH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhe--eeEEcccccC----------------CCCCChHH
Confidence 46789999999999999999999999999999999999985311 1111111100 01112233
Q ss_pred HHHHHHHHhhcCC-EEEEEcCCccChhhhccCCe-eEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 549 KYEIVKILQEKKH-VVGMTGDGVNDAPALKKADI-GIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 549 K~~iv~~l~~~g~-~v~~iGDG~ND~~al~~Adv-gIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
-..+.+.+.-..+ .++++||+.||+.|.+.|++ +|.++++.+ ..+|.++ +++..+...+.
T Consensus 165 ~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~---~~~~~~~--~~~~el~~~l~ 226 (231)
T 3kzx_A 165 VLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI---IKDILSF--KNFYDIRNFIC 226 (231)
T ss_dssp HHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC--------CCEEE--SSHHHHHHHHH
T ss_pred HHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC---CCCceee--CCHHHHHHHHH
Confidence 3455666655555 79999999999999999997 777776654 3567776 55887777664
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.01 E-value=1.5e-05 Score=80.58 Aligned_cols=121 Identities=13% Similarity=0.109 Sum_probs=79.0
Q ss_pred CCCCChHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 469 PPRHDSSDTIHRALKL-GVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~-Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
++.+++.+.++.|++. |+++.++|+.....+....+.+|+.... + ..+.+.+.. ..|.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-~~~~~~~~~-------------------~~~k 151 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-P-FGAFADDAL-------------------DRNE 151 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-S-CEECTTTCS-------------------SGGG
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhc-C-cceecCCCc-------------------Cccc
Confidence 3578999999999999 9999999999998888888888885321 1 111111110 0111
Q ss_pred HH----HHHHHHHh--hcCCEEEEEcCCccChhhhccCC---eeEEecCchHHHh-h-hcCEEEeCCChhHHHHHH
Q 003313 548 HK----YEIVKILQ--EKKHVVGMTGDGVNDAPALKKAD---IGIAVAGATEAAR-G-AADIVLTEPGLSVICSAV 612 (831)
Q Consensus 548 ~K----~~iv~~l~--~~g~~v~~iGDG~ND~~al~~Ad---vgIa~~~~~~~a~-~-aadivl~~~~~~~i~~~i 612 (831)
-+ ..+.+.+. -..+.++++||+.||..|.+.|+ +++++|.+..... . .+|+++.+ +..+...+
T Consensus 152 ~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~--~~el~~~l 225 (234)
T 2hcf_A 152 LPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKN--FAETDEVL 225 (234)
T ss_dssp HHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESC--SCCHHHHH
T ss_pred hHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCC--HHhHHHHH
Confidence 11 23344444 33467999999999999999999 4455554433322 2 38998854 45555444
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.99 E-value=4.6e-06 Score=82.85 Aligned_cols=121 Identities=13% Similarity=0.022 Sum_probs=84.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+.... ..++...+.. ...-.|+-
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~kp~~~~ 150 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFF--DIVLSGEEFK----------------ESKPNPEI 150 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGCS----------------SCTTSSHH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhe--eeEeeccccc----------------CCCCChHH
Confidence 46789999999999999999999999999999999999985311 1111111100 01112333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecC--chHHHhhhcCEEEeCCChhHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAG--ATEAARGAADIVLTEPGLSVIC 609 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~--~~~~a~~aadivl~~~~~~~i~ 609 (831)
-..+.+.+.-..+.++++||+.||..|.+.|++++++.+ +....+..+|+++. ++..+.
T Consensus 151 ~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~--~~~el~ 211 (214)
T 3e58_A 151 YLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLD--SLTDVL 211 (214)
T ss_dssp HHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEES--SGGGGG
T ss_pred HHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHH--HHHHHH
Confidence 445566665556779999999999999999999988852 23444477899884 455443
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.97 E-value=3.9e-06 Score=86.33 Aligned_cols=68 Identities=13% Similarity=0.214 Sum_probs=57.2
Q ss_pred EEEeChH--HHHHHHHHHhhcCCEEEEEcCCccChhhhccC--CeeEEecCchHHHhhhcCEEEeC-CChhHHHHHHH
Q 003313 541 FTDVFAE--HKYEIVKILQEKKHVVGMTGDGVNDAPALKKA--DIGIAVAGATEAARGAADIVLTE-PGLSVICSAVL 613 (831)
Q Consensus 541 ~~~~~P~--~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~A--dvgIa~~~~~~~a~~aadivl~~-~~~~~i~~~i~ 613 (831)
+..+.|. +|..-++.+.+.-. |+++||+.||.+||+.| ++||||||+ ++.||+++.+ ++-+++.++++
T Consensus 151 ~lei~~~~~~Kg~al~~l~~~~g-via~GD~~ND~~Ml~~a~~g~~vam~Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 151 IIELRVPGVNKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp EEEEECTTCCHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred EEEEEcCCCCHHHHHHHHHhhCC-eEEEeCCCccHHHHHHhhCCcEEEECCC----CCcceEEeCCCCCHHHHHHHHH
Confidence 4455554 69999999887633 99999999999999999 999999997 6789999987 77788887775
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.97 E-value=8.2e-06 Score=83.45 Aligned_cols=138 Identities=14% Similarity=0.056 Sum_probs=89.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHH--HhcCcEEEeCh
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELI--EKADGFTDVFA 546 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~P 546 (831)
+++|++.+.++.|+++|+++.++|+.....+..+.+ |+.. . ..++....... . ..+.... .....+.+...
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~--~-~~v~~~~~~~~-~-~~~~~~~~kp~p~~~~~~~~ 149 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVE--K-DRIYCNHASFD-N-DYIHIDWPHSCKGTCSNQCG 149 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSC--G-GGEEEEEEECS-S-SBCEEECTTCCCTTCCSCCS
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCC--C-CeEEeeeeEEc-C-CceEEecCCCCccccccccC
Confidence 578999999999999999999999999888888877 6632 1 12221111000 0 0000000 00000111124
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhh--cCEEEeCCChhHHHHHHHHh
Q 003313 547 EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGA--ADIVLTEPGLSVICSAVLTS 615 (831)
Q Consensus 547 ~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~a--adivl~~~~~~~i~~~i~~g 615 (831)
.+|.+.++.++...+.++|+||+.||++|.+.|++.++.....+..++. +|+++ +++..+...+...
T Consensus 150 ~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~~~ 218 (236)
T 2fea_A 150 CCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPY--QDFYEIRKEIENV 218 (236)
T ss_dssp SCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECC--SSHHHHHHHHHTS
T ss_pred CcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeec--CCHHHHHHHHHHh
Confidence 5688899988877889999999999999999999998753222233333 67766 5688888777543
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.95 E-value=8.4e-06 Score=84.30 Aligned_cols=128 Identities=13% Similarity=-0.020 Sum_probs=86.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... .+..++.+.+.. ....-.|+-
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~-f~~~i~~~~~~~---------------~~~Kp~~~~ 173 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTEL-AGEHIYDPSWVG---------------GRGKPHPDL 173 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHH-HCSCEECGGGGT---------------TCCTTSSHH
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhh-ccceEEeHhhcC---------------cCCCCChHH
Confidence 4568999999999999999999999999999999999987421 000011111000 011112223
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCee-EEecCc-------h-HHHhhhcCEEEeCCChhHHHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG-IAVAGA-------T-EAARGAADIVLTEPGLSVICSAVLT 614 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg-Ia~~~~-------~-~~a~~aadivl~~~~~~~i~~~i~~ 614 (831)
-..+.+.+.-..+.++++||+.||+.|.+.|+++ +.+..| . +..+..+|+++ +++..+.+.+..
T Consensus 174 ~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi--~~l~el~~~l~~ 246 (259)
T 4eek_A 174 YTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVL--TSHAELRAALAE 246 (259)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEE--CSHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhh--CCHHHHHHHHHh
Confidence 3445555554557799999999999999999998 445433 2 23334589998 568888887764
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=1.1e-05 Score=82.37 Aligned_cols=124 Identities=12% Similarity=0.057 Sum_probs=84.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++...+.. ...-.|+-
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~Kp~~~~ 166 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVL--DSCLSADDLK----------------IYKPDPRI 166 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGTT----------------CCTTSHHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHc--CEEEEccccC----------------CCCCCHHH
Confidence 47799999999999999999999999999899999999985311 1111111100 11112333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe---cCchHHHhhhc-CEEEeCCChhHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV---AGATEAARGAA-DIVLTEPGLSVICSAV 612 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~---~~~~~~a~~aa-divl~~~~~~~i~~~i 612 (831)
-..+.+.+.-..+.++++||+.||+.|.+.|++.... +++.+..+..+ |+++ +++..+...+
T Consensus 167 ~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 232 (240)
T 2no4_A 167 YQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQV--NSLSELWPLL 232 (240)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceee--CCHHHHHHHH
Confidence 3445555555556799999999999999999966544 43333334457 8888 4577777655
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=97.91 E-value=7.3e-06 Score=85.85 Aligned_cols=66 Identities=24% Similarity=0.221 Sum_probs=57.7
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
.|...++.+.++ .+.++++||+.||.+|++.|++|++|+++.+..++.||+++.+++-+++.++++
T Consensus 191 ~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 191 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 677777766553 356999999999999999999999999999999999999999888889988875
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.90 E-value=6.7e-06 Score=83.39 Aligned_cols=124 Identities=10% Similarity=0.065 Sum_probs=86.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++...+.. ...-.|+-
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~Kp~~~~ 156 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPVQ----------------VYKPDNRV 156 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGGT----------------CCTTSHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhh--heEEEecccC----------------CCCCCHHH
Confidence 46799999999999999999999999998888888999874311 1111111000 11122333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEec----CchHHHhhhcCEEEeCCChhHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA----GATEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~----~~~~~a~~aadivl~~~~~~~i~~~i 612 (831)
-..+.+.+.-..+.++++||+.||..|.+.|++++++- +..+..+..+|+++ +++..+...+
T Consensus 157 ~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 222 (232)
T 1zrn_A 157 YELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVELF 222 (232)
T ss_dssp HHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHTTC
T ss_pred HHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEE--CCHHHHHHHH
Confidence 44555666555567999999999999999999999882 33333455689888 4577666544
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=7.7e-06 Score=85.94 Aligned_cols=128 Identities=13% Similarity=0.030 Sum_probs=86.0
Q ss_pred CCCCChHHHHHHHHhCCC--eEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeCh
Q 003313 469 PPRHDSSDTIHRALKLGV--CVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFA 546 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi--~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P 546 (831)
++.|++.+.++.|++.|+ ++.++|+.....+....+.+|+.... ..++........ .....-.|
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--d~v~~~~~~~~~------------~~~~Kp~~ 207 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLF--DGLTYCDYSRTD------------TLVCKPHV 207 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSC--SEEECCCCSSCS------------SCCCTTSH
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccccc--ceEEEeccCCCc------------ccCCCcCH
Confidence 567899999999999999 99999999999999999999985321 111111110000 00111122
Q ss_pred HHHHHHHHHHhhcC-CEEEEEcCCccChhhhccCCeeEEecCchHHH------hhhcCEEEeCCChhHHHHHH
Q 003313 547 EHKYEIVKILQEKK-HVVGMTGDGVNDAPALKKADIGIAVAGATEAA------RGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 547 ~~K~~iv~~l~~~g-~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a------~~aadivl~~~~~~~i~~~i 612 (831)
+--..+.+.+.-.. +.++++||+.||..|.+.|++|.+|+.+.+.. ...||+++ +++..+..++
T Consensus 208 ~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi--~sl~el~~~l 278 (282)
T 3nuq_A 208 KAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVI--SDILELPHVV 278 (282)
T ss_dssp HHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEE--SSGGGGGGTS
T ss_pred HHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEe--CCHHHHHHHh
Confidence 33344555555555 78999999999999999999999986433322 33788988 4566665543
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.86 E-value=5.6e-05 Score=77.13 Aligned_cols=125 Identities=15% Similarity=0.129 Sum_probs=83.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+.... ..++.+.+.. ...-.|+-
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~Kp~~~~ 155 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFF--EHVIISDFEG----------------VKKPHPKI 155 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT----------------CCTTCHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhc--cEEEEeCCCC----------------CCCCCHHH
Confidence 46789999999999999999999999988888888999975311 1111111000 01111222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCc-cChhhhccCCeeEEe---cCchHHHhh---hcCEEEeCCChhHHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGV-NDAPALKKADIGIAV---AGATEAARG---AADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~-ND~~al~~AdvgIa~---~~~~~~a~~---aadivl~~~~~~~i~~~i~ 613 (831)
=..+.+.+.-..+.++++||+. ||..|.+.|+++.+. |.+...... .+|+++ +++..+...+.
T Consensus 156 ~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 225 (241)
T 2hoq_A 156 FKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEI--DNLESLLEVLA 225 (241)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEE--SSTTHHHHHHH
T ss_pred HHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEE--CCHHHHHHHHH
Confidence 2344455554556799999998 999999999998665 433333332 689887 45777766553
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=1.2e-05 Score=82.93 Aligned_cols=66 Identities=18% Similarity=0.137 Sum_probs=56.9
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhh-------cCEEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGA-------ADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~a-------adivl~~~~~~~i~~~i~ 613 (831)
.|...++.+.+. .+.++++||+.||.+|++.|++|++||++.+..++. ||+++.+++-+++.++++
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 587777777653 346999999999999999999999999999999885 889998888899998875
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=4.4e-05 Score=76.71 Aligned_cols=135 Identities=16% Similarity=0.112 Sum_probs=82.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCC---------------HHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDH---------------LAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDE 533 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~---------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (831)
++.|++.+++++|+++|+++.++|+.. ...+..+.+++|+.. ..........+......
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---~~~~~~~~~~~~~~~~~--- 123 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDL---DGIYYCPHHPQGSVEEF--- 123 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCC---SEEEEECCBTTCSSGGG---
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCce---EEEEECCcCCCCccccc---
Confidence 678999999999999999999999999 466777888888751 11111100000000000
Q ss_pred HHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCee--EEe--cCc-hHHHhhhcCEEEeCCChhHH
Q 003313 534 LIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG--IAV--AGA-TEAARGAADIVLTEPGLSVI 608 (831)
Q Consensus 534 ~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg--Ia~--~~~-~~~a~~aadivl~~~~~~~i 608 (831)
........-.|+--..+.+.+.-..+.++||||+.||+.+.++|++. |.+ |.+ .+.....+|+++ +++..+
T Consensus 124 --~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi--~~l~el 199 (211)
T 2gmw_A 124 --RQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADL 199 (211)
T ss_dssp --BSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGH
T ss_pred --CccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEe--CCHHHH
Confidence 00000111223333445555554556799999999999999999964 344 322 233345689988 457777
Q ss_pred HHHHH
Q 003313 609 CSAVL 613 (831)
Q Consensus 609 ~~~i~ 613 (831)
.+.+.
T Consensus 200 ~~~l~ 204 (211)
T 2gmw_A 200 PQAIK 204 (211)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76654
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.80 E-value=3.5e-05 Score=78.03 Aligned_cols=123 Identities=11% Similarity=0.058 Sum_probs=84.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.|+ .|+++.++|+..........+.+|+.... ..++...+.. ...-.|+-
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~kp~~~~ 167 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYF--KKIILSEDLG----------------VLKPRPEI 167 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGTT----------------CCTTSHHH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhc--eeEEEeccCC----------------CCCCCHHH
Confidence 46789999999999 99999999999988888888889875311 1111111100 01112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCc-cChhhhccCCeeEEecCchH--HHhhhcCEEEeCCChhHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGV-NDAPALKKADIGIAVAGATE--AARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~-ND~~al~~AdvgIa~~~~~~--~a~~aadivl~~~~~~~i~~~i 612 (831)
-..+.+.+.-..+.++++||+. ||..|.+.|++++++.+... ..+..+|+++ +++..+..+.
T Consensus 168 ~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi--~sl~e~~~~~ 232 (240)
T 3qnm_A 168 FHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHI--HSLKELMNLL 232 (240)
T ss_dssp HHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEE--SSTHHHHHHT
T ss_pred HHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEE--CCHHHHHHHH
Confidence 3344444444456899999995 99999999999999964332 4556799998 4577666544
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.78 E-value=1.8e-05 Score=79.65 Aligned_cols=116 Identities=12% Similarity=-0.005 Sum_probs=80.4
Q ss_pred CCCCChHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeCh-
Q 003313 469 PPRHDSSDTIHRALKLG-VCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFA- 546 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~G-i~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P- 546 (831)
++.+++.+.++.|++.| +++.++|+..........+.+|+.... .. +++...|
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f--~~-----------------------~~~~~kpk 159 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYF--DH-----------------------IEVMSDKT 159 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGC--SE-----------------------EEEESCCS
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhh--he-----------------------eeecCCCC
Confidence 46789999999999999 999999999988888888899874210 00 1222222
Q ss_pred -HHHHHHHHHHhhcCCEEEEEcCCc-cChhhhccCCeeEEe-------cCchHHHhhhc-CEEEeCCChhHHHHH
Q 003313 547 -EHKYEIVKILQEKKHVVGMTGDGV-NDAPALKKADIGIAV-------AGATEAARGAA-DIVLTEPGLSVICSA 611 (831)
Q Consensus 547 -~~K~~iv~~l~~~g~~v~~iGDG~-ND~~al~~AdvgIa~-------~~~~~~a~~aa-divl~~~~~~~i~~~ 611 (831)
+--..+.+.+.-..+.++++||+. ||..|.+.|++++++ |++....+..+ |+++ +++..+...
T Consensus 160 ~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~--~~l~el~~~ 232 (234)
T 3ddh_A 160 EKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQV--KRLDDLLSL 232 (234)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEEC--SSGGGHHHH
T ss_pred HHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceec--ccHHHHHHh
Confidence 222334444444456799999996 999999999999887 23333323344 8887 457776654
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.77 E-value=2.9e-05 Score=81.37 Aligned_cols=114 Identities=16% Similarity=-0.004 Sum_probs=79.3
Q ss_pred CCCChHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 470 PRHDSSDTIHRALKL-GVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 470 lr~~~~~~I~~l~~~-Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+.. . ..++.+.+... ..-.|+-
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~--f-~~i~~~~~~~~----------------~kp~~~~ 175 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR--P-EYFITANDVKQ----------------GKPHPEP 175 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC--C-SSEECGGGCSS----------------CTTSSHH
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc--c-CEEEEcccCCC----------------CCCChHH
Confidence 568999999999999 99999999999998888888888752 1 11222211110 0112333
Q ss_pred HHHHHHHHhh-------cCCEEEEEcCCccChhhhccCCeeEEe---cCchH-HHhhhcCEEEeC
Q 003313 549 KYEIVKILQE-------KKHVVGMTGDGVNDAPALKKADIGIAV---AGATE-AARGAADIVLTE 602 (831)
Q Consensus 549 K~~iv~~l~~-------~g~~v~~iGDG~ND~~al~~AdvgIa~---~~~~~-~a~~aadivl~~ 602 (831)
-..+.+.+.- ..+.++++||+.||..|++.|++++++ +++.+ ..+..||+++.+
T Consensus 176 ~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 176 YLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp HHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred HHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 3455566655 556799999999999999999987776 43333 333458998754
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.76 E-value=7.2e-06 Score=81.74 Aligned_cols=119 Identities=9% Similarity=0.009 Sum_probs=80.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.... ..++.+.+.. ...-.|+-
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~KP~~~~ 143 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRM--AVTISADDTP----------------KRKPDPLP 143 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGE--EEEECGGGSS----------------CCTTSSHH
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhc--cEEEecCcCC----------------CCCCCcHH
Confidence 4678999999999999 999999999988888888888774210 0111110000 00111333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecC----chHHHhhhcCEEEeCCChhHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAG----ATEAARGAADIVLTEPGLSVIC 609 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~----~~~~a~~aadivl~~~~~~~i~ 609 (831)
-..+.+.++-..+.++++||+.||..|.+.|++++++.+ +.+..++ ||+++. ++..+.
T Consensus 144 ~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~el~ 205 (209)
T 2hdo_A 144 LLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLDIL 205 (209)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGGGG
T ss_pred HHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHHHH
Confidence 345555555555679999999999999999999999832 2344445 999884 455443
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00025 Score=68.06 Aligned_cols=131 Identities=13% Similarity=0.183 Sum_probs=83.2
Q ss_pred cccCceEEEEEeeeecCC--CCChHHHHHHHHHhccccCCChHHHHHHHHhCChHHH--hhccceeEEecCCCCCceEEE
Q 003313 315 LTLNRLTVDRNLIEVFNR--DMDKDILVLLAARASRLENQDAIDAAIINMLADPKEA--RANINEVHFLPFNPVDKRTAI 390 (831)
Q Consensus 315 LT~~~~~v~~~~~~~~~~--~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~--~~~~~~l~~~~f~s~~k~~sv 390 (831)
||+|+|+|.++.. +.. +.+.++++.+++..+..++ ||+++||++++...... .......+.+| .+.+..
T Consensus 1 LT~G~p~V~~v~~--~~~~~~~~~~~lL~laaslE~~Se-HPlA~AIv~~a~~~~~~~~~~~~~~f~~i~----G~Gv~a 73 (165)
T 2arf_A 1 AGHMVPRVMRVLL--LGDVATLPLRKVLAVVGTAEASSE-HPLGVAVTKYCKEELGTETLGYCTDFQAVP----GCGIGC 73 (165)
T ss_dssp CCCCCCCEEEEEE--CCCTTTSCHHHHHHHHHHHHTTSC-STTHHHHHHHHHHHHTCCCCCCEEEEEEET----TTEEEE
T ss_pred CCCceeEEEEEEe--eCCcCCCCHHHHHHHHHHHHccCC-ChHHHHHHHHHHHhcCCCCCCCcCceEEec----CccEEE
Confidence 8999999998753 221 2467889999988888776 99999999987421000 01122233333 222333
Q ss_pred EEEcC------------------------------CCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeee
Q 003313 391 TYTDS------------------------------EGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLA 440 (831)
Q Consensus 391 ~v~~~------------------------------~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~ 440 (831)
.+... ..+.+.+..|+++.+.+..- ..+..+.+.+..+..+|..++.
T Consensus 74 ~v~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi---~~~~~~~~~~~~~~~~G~T~v~ 150 (165)
T 2arf_A 74 KVSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGL---TISSDVSDAMTDHEMKGQTAIL 150 (165)
T ss_dssp EEECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHC---SSCHHHHHHHHHHHTTTSEEEE
T ss_pred EEcCcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCC---CCCHHHHHHHHHHHhCCCeEEE
Confidence 33221 01234677899998754211 1123344556677789999999
Q ss_pred eeeecCCCCCCCCCCCCceeeeeccccC
Q 003313 441 VAVQEVPEMTEDSPGGPRSFCGLLPLFD 468 (831)
Q Consensus 441 ~a~~~~~~~~~~~~e~~l~~lG~i~~~D 468 (831)
+|.++ .++|++++.|
T Consensus 151 va~dg-------------~~~g~i~l~D 165 (165)
T 2arf_A 151 VAIDG-------------VLCGMIAIAD 165 (165)
T ss_dssp EEETT-------------EEEEEEEECC
T ss_pred EEECC-------------EEEEEEEEEC
Confidence 99877 8999999987
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.73 E-value=2.5e-05 Score=80.11 Aligned_cols=122 Identities=14% Similarity=0.134 Sum_probs=85.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.|++. +++.++|+........+.+.+|+... .++... .. -...-.|+-
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f~----~~~~~~-----------~~-----~~~kp~~~~ 178 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPWD----MLLCAD-----------LF-----GHYKPDPQV 178 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCCS----EECCHH-----------HH-----TCCTTSHHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCcc----eEEeec-----------cc-----ccCCCCHHH
Confidence 4578999999999986 99999999999888889899997411 111100 00 011112333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecC-----ch---HH--HhhhcCEEEeCCChhHHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAG-----AT---EA--ARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~-----~~---~~--a~~aadivl~~~~~~~i~~~i~ 613 (831)
-..+.+.+.-..+.++++||+.||+.|.+.|+++++|.+ |. +. .+..+|+++ +++..+...+.
T Consensus 179 ~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~--~~l~el~~~l~ 251 (254)
T 3umc_A 179 YLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIA--SDLLDLHRQLA 251 (254)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEE--CCHHHHHHHhc
Confidence 344555555455779999999999999999999999964 22 22 256789998 56888777664
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.71 E-value=4.1e-05 Score=78.92 Aligned_cols=123 Identities=13% Similarity=0.124 Sum_probs=85.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|+ |+++.++|+.....+..+.+.+|+.... ..++...+.. ...-.|+-
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~~----------------~~Kp~~~~ 152 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAKR----------------VFKPHPDS 152 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT----------------CCTTSHHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhc--cEEEEccccC----------------CCCCCHHH
Confidence 57799999999999 9999999999999999999999974311 1111111000 11122333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCc---------------------------hHHHhhhcCEEEe
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGA---------------------------TEAARGAADIVLT 601 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~---------------------------~~~a~~aadivl~ 601 (831)
-..+++.+.-..+.++++||+.||+.|.+.|+++.++.+. .+..+..+|+++
T Consensus 153 ~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~- 231 (253)
T 1qq5_A 153 YALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV- 231 (253)
T ss_dssp HHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE-
T ss_pred HHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeee-
Confidence 3445555554556799999999999999999999998644 122345689888
Q ss_pred CCChhHHHHHHH
Q 003313 602 EPGLSVICSAVL 613 (831)
Q Consensus 602 ~~~~~~i~~~i~ 613 (831)
+++..+...+.
T Consensus 232 -~~~~el~~~l~ 242 (253)
T 1qq5_A 232 -PALGDLPRLVR 242 (253)
T ss_dssp -SSGGGHHHHHH
T ss_pred -CCHHHHHHHHH
Confidence 56777777663
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.71 E-value=6.3e-05 Score=76.85 Aligned_cols=122 Identities=13% Similarity=0.111 Sum_probs=80.5
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHH
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHK 549 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K 549 (831)
+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+. . . ..++.+.+.. ...-.|+-=
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~-f-~~~~~~~~~~----------------~~Kp~p~~~ 171 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S-F-DFALGEKSGI----------------RRKPAPDMT 171 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T-C-SEEEEECTTS----------------CCTTSSHHH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c-e-eEEEecCCCC----------------CCCCCHHHH
Confidence 5689999999999999999999999888888888888874 2 1 1122111100 001112222
Q ss_pred HHHHHHHhhcCCEEEEEcCCccChhhhccCCee---EEecCch-HHH-hhhcCEEEeCCChhHHHHHH
Q 003313 550 YEIVKILQEKKHVVGMTGDGVNDAPALKKADIG---IAVAGAT-EAA-RGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 550 ~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg---Ia~~~~~-~~a-~~aadivl~~~~~~~i~~~i 612 (831)
....+.+.-..+.++++||+.||+.|.+.|++. +++|.+. +.. +..+|+++ +++..+...+
T Consensus 172 ~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~--~~~~el~~~l 237 (240)
T 2hi0_A 172 SECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIV--DTAEKLEEAI 237 (240)
T ss_dssp HHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEE--CSHHHHHHHH
T ss_pred HHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEE--CCHHHHHHHh
Confidence 334445544556799999999999999999994 4445332 333 34688887 4577666544
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.71 E-value=6.3e-05 Score=76.06 Aligned_cols=124 Identities=10% Similarity=0.061 Sum_probs=84.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.|++. +++.++|+.....+....+.+|+.... ..++...+.. ...-.|+-
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~kp~~~~ 163 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFF--KDIFVSEDTG----------------FQKPMKEY 163 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGTT----------------SCTTCHHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhh--heEEEecccC----------------CCCCChHH
Confidence 5678999999999999 999999999998888888888875311 1111111000 01111222
Q ss_pred HHHHHHHHh-hcCCEEEEEcCCc-cChhhhccCCeeEE-ecCc--hHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 549 KYEIVKILQ-EKKHVVGMTGDGV-NDAPALKKADIGIA-VAGA--TEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 549 K~~iv~~l~-~~g~~v~~iGDG~-ND~~al~~AdvgIa-~~~~--~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
-..+.+.+. -..+.++++||+. ||+.|.+.|+++.. ++.+ .+..+..+|+++ +++..+.+.+.
T Consensus 164 ~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~--~~~~el~~~l~ 231 (238)
T 3ed5_A 164 FNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEI--RKLEELYHILN 231 (238)
T ss_dssp HHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEE--SSGGGHHHHHT
T ss_pred HHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEE--CCHHHHHHHHH
Confidence 233444443 3346799999998 99999999999544 4433 555667899998 56888877664
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.71 E-value=1.4e-05 Score=82.12 Aligned_cols=121 Identities=15% Similarity=0.075 Sum_probs=76.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHH-HHhCCCCCCCCCccccCC--cCCCCCcccHHHHHHhcCcEEEeC
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETG-RRLGIGTNMYPSSLLLGR--DKDENEALPVDELIEKADGFTDVF 545 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia-~~~gi~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~ 545 (831)
++.+++.+.++.|++.|+++.++|+.........- +..|+... . ..++.+. +.. ...-.
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~-f-~~~~~~~~~~~~----------------~~Kp~ 173 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSL-F-SHIVLGDDPEVQ----------------HGKPD 173 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTT-S-SCEECTTCTTCC----------------SCTTS
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhh-e-eeEEecchhhcc----------------CCCCC
Confidence 47889999999999999999999999866554432 22333211 0 1111111 000 00111
Q ss_pred hHHHHHHHHHHhhcC--CEEEEEcCCccChhhhccCC---eeEEecCchHHHhhhcCEEEeCCChhHHH
Q 003313 546 AEHKYEIVKILQEKK--HVVGMTGDGVNDAPALKKAD---IGIAVAGATEAARGAADIVLTEPGLSVIC 609 (831)
Q Consensus 546 P~~K~~iv~~l~~~g--~~v~~iGDG~ND~~al~~Ad---vgIa~~~~~~~a~~aadivl~~~~~~~i~ 609 (831)
|+--..+.+.+.-.. +.++++||+.||+.|.+.|+ +++++|++.+..+..||+++. ++..+.
T Consensus 174 ~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~--sl~el~ 240 (250)
T 3l5k_A 174 PDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLN--SLQDFQ 240 (250)
T ss_dssp THHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECS--CGGGCC
T ss_pred hHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeec--CHHHhh
Confidence 222233334443333 78999999999999999999 556667777778889999984 455443
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.71 E-value=5e-05 Score=77.58 Aligned_cols=123 Identities=11% Similarity=0.063 Sum_probs=85.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.|++. +++.++|+........+.+.+|+... .++... .. ....-.|+-
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~----~~~~~~-----------~~-----~~~kp~~~~ 174 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWD----VIIGSD-----------IN-----RKYKPDPQA 174 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCS----CCCCHH-----------HH-----TCCTTSHHH
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCee----EEEEcC-----------cC-----CCCCCCHHH
Confidence 5678999999999997 99999999999999999999998411 111100 00 000111222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHH----------HhhhcCEEEeCCChhHHHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEA----------ARGAADIVLTEPGLSVICSAVLT 614 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~----------a~~aadivl~~~~~~~i~~~i~~ 614 (831)
=..+.+.+.-..+.++++||+.||+.|.+.|+++++|.+.... .+..+|+++ +++..+...+..
T Consensus 175 ~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~--~~~~el~~~l~~ 248 (254)
T 3umg_A 175 YLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISA--TDITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEE--SSHHHHHHHHHH
T ss_pred HHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEE--CCHHHHHHHhcC
Confidence 2334444444456799999999999999999999999642111 356789998 568888887753
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.69 E-value=3.9e-05 Score=75.90 Aligned_cols=120 Identities=8% Similarity=0.076 Sum_probs=81.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+ ++.|++. +++.++|+.....+..+.+.+|+.... ..++.+.+.. ...-.|+-
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~Kp~~~~ 133 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYF--KGIFSAESVK----------------EYKPSPKV 133 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT----------------CCTTCHHH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhC--cEEEehhhcC----------------CCCCCHHH
Confidence 45689999 9999999 999999999988888888999974311 1111111000 01112333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe----cCchHHHhhhcCEEEeCCChhHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV----AGATEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~----~~~~~~a~~aadivl~~~~~~~i~~~i 612 (831)
-..+++.++ .+.++++||+.||..|.+.|+++.++ +++.+..+..+|+++ +++..+...+
T Consensus 134 ~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 197 (201)
T 2w43_A 134 YKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIV--NDFKELYEWI 197 (201)
T ss_dssp HHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEE--SSHHHHHHHH
T ss_pred HHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEE--CCHHHHHHHH
Confidence 345556665 56789999999999999999999877 233333345689887 4577776655
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.66 E-value=7.5e-05 Score=73.30 Aligned_cols=87 Identities=10% Similarity=0.048 Sum_probs=66.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEE--eC
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDH-LAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTD--VF 545 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~ 545 (831)
++.|++.+++++|++.|+++.++||.. ...+..+.+.+|+... |.. ..
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~-----------------------------f~~~~~~ 118 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRY-----------------------------FVHREIY 118 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTT-----------------------------EEEEEES
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhh-----------------------------cceeEEE
Confidence 578999999999999999999999998 6889999999998531 111 12
Q ss_pred hHHH----HHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEE
Q 003313 546 AEHK----YEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA 584 (831)
Q Consensus 546 P~~K----~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa 584 (831)
+..| ..+.+.+.-..+.++++||+.||+.+.++|++...
T Consensus 119 ~~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 119 PGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp SSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred eCchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 2223 23333443344679999999999999999998654
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.65 E-value=7.3e-05 Score=75.19 Aligned_cols=122 Identities=11% Similarity=0.090 Sum_probs=79.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEE--EeCh
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFT--DVFA 546 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~P 546 (831)
++.+++.+.++.++. ++.++|+........+.+++|+... .+..++.+. .. . .. .-.|
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~-~~~~~~~~~-----------~~-~----~~~~kpk~ 146 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPY-FAPHIYSAK-----------DL-G----ADRVKPKP 146 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGG-TTTCEEEHH-----------HH-C----TTCCTTSS
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHh-ccceEEecc-----------cc-c----cCCCCcCH
Confidence 356788888888774 9999999999888888888887421 101111100 00 0 00 0122
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCee-EEecCchH-------HHhhh-cCEEEeCCChhHHHHHH
Q 003313 547 EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG-IAVAGATE-------AARGA-ADIVLTEPGLSVICSAV 612 (831)
Q Consensus 547 ~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg-Ia~~~~~~-------~a~~a-adivl~~~~~~~i~~~i 612 (831)
+--..+++.+.-..+.++++||+.||.+|++.|+++ ++++++.+ ..++. ||+++. ++..+...+
T Consensus 147 ~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l 219 (229)
T 2fdr_A 147 DIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVIS--RMQDLPAVI 219 (229)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHH
T ss_pred HHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeec--CHHHHHHHH
Confidence 223445555554556799999999999999999998 77765443 35666 999984 566666655
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.65 E-value=6.2e-05 Score=73.43 Aligned_cols=107 Identities=13% Similarity=-0.004 Sum_probs=70.5
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHH
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHK 549 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K 549 (831)
+.+++.+.++.|++.|+++.++|+... .+....+.+|+.... ..++.+.+.. ...-.|+--
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f--~~~~~~~~~~----------------~~kp~~~~~ 143 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYF--TEVVTSSSGF----------------KRKPNPESM 143 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGE--EEEECGGGCC----------------CCTTSCHHH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhe--eeeeeccccC----------------CCCCCHHHH
Confidence 678999999999999999999999865 466777778874210 0111110000 001112223
Q ss_pred HHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcC
Q 003313 550 YEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAAD 597 (831)
Q Consensus 550 ~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aad 597 (831)
..+.+.+.-. .++++||+.||.+|.+.|++++++-+.....++..+
T Consensus 144 ~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~ 189 (190)
T 2fi1_A 144 LYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred HHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCCChhhccC
Confidence 3444444433 789999999999999999999988755555555544
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.65 E-value=4.1e-05 Score=79.52 Aligned_cols=66 Identities=30% Similarity=0.301 Sum_probs=55.5
Q ss_pred HHHHHHHHHhh----cCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 548 HKYEIVKILQE----KKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~----~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
.|...++.+.+ ..+.++++||+.||.+|++.|++|++|+++.+..++.||+++.+++-+++.++++
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHH
Confidence 56666655544 2457999999999999999999999999999989999999998877778988775
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00032 Score=68.86 Aligned_cols=136 Identities=15% Similarity=0.096 Sum_probs=90.6
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEe
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHL---AIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDV 544 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~---~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 544 (831)
-++.|++.++++.|+++|+++.++|+... ..+..+.+.+|+.... ..++...+.... .....-
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~~------------~~~~KP 98 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYF--DFIYASNSELQP------------GKMEKP 98 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGE--EEEEECCTTSST------------TCCCTT
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhhe--EEEEEccccccc------------cCCCCc
Confidence 36889999999999999999999998776 7888899999985310 111111100000 001112
Q ss_pred ChHHHHHHHHHHhhcCCEEEEEcCC-ccChhhhccCCeeEEe-cCchH-----HHh-hhcCEEEeCCChhHHHHHHHHhH
Q 003313 545 FAEHKYEIVKILQEKKHVVGMTGDG-VNDAPALKKADIGIAV-AGATE-----AAR-GAADIVLTEPGLSVICSAVLTSR 616 (831)
Q Consensus 545 ~P~~K~~iv~~l~~~g~~v~~iGDG-~ND~~al~~AdvgIa~-~~~~~-----~a~-~aadivl~~~~~~~i~~~i~~gR 616 (831)
.|+--..+++.+......++||||+ .+|+.+-++|++.... .++.. ... ..+|.++...++..+.++++..+
T Consensus 99 ~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~~ 178 (189)
T 3ib6_A 99 DKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLLK 178 (189)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHHH
Confidence 3333445555565556789999999 7999999999997554 22221 111 26899997668999998887655
Q ss_pred H
Q 003313 617 T 617 (831)
Q Consensus 617 ~ 617 (831)
.
T Consensus 179 ~ 179 (189)
T 3ib6_A 179 K 179 (189)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.57 E-value=5.6e-05 Score=76.38 Aligned_cols=122 Identities=11% Similarity=0.103 Sum_probs=81.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.|++ |+++.++|+..........+.++-. . ..++... ++ ....-.|+-
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~---f-d~i~~~~-----------~~-----~~~KP~~~~ 157 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVE---F-DHIITAQ-----------DV-----GSYKPNPNN 157 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSC---C-SEEEEHH-----------HH-----TSCTTSHHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCc---c-CEEEEcc-----------cc-----CCCCCCHHH
Confidence 678999999999999 8999999999887776665554311 0 1111110 00 011223343
Q ss_pred HHHH---HHHHhhcCCEEEEEcCCc-cChhhhccCCeeEEecCch-----------HHHhhhcCEEEeCCChhHHHHHHH
Q 003313 549 KYEI---VKILQEKKHVVGMTGDGV-NDAPALKKADIGIAVAGAT-----------EAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 549 K~~i---v~~l~~~g~~v~~iGDG~-ND~~al~~AdvgIa~~~~~-----------~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
.... .+.+.-..+.++++||+. ||+.|.+.|+++++|.+.. +..+..||+++ +++..+.+.+.
T Consensus 158 ~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~--~~~~el~~~l~ 235 (240)
T 3smv_A 158 FTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRF--NSMGEMAEAHK 235 (240)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEe--CCHHHHHHHHH
Confidence 3344 334444456799999996 9999999999999995321 23447899998 56877777664
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.49 E-value=6e-05 Score=75.32 Aligned_cols=115 Identities=13% Similarity=0.058 Sum_probs=77.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|++ |+++.++|+.....+....+.+|+.... ..++ .+.-.+.-
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f--~~i~----------------------~~~~~~Kp 138 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF--DGIY----------------------GSSPEAPH 138 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGC--SEEE----------------------EECSSCCS
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhe--eeee----------------------cCCCCCCC
Confidence 467899999999999 9999999999888888888889985311 1111 11100111
Q ss_pred HHHH----HHHHhhcCCEEEEEcCCccChhhhccCCe---eEEecCc-hHHHh-hhcCEEEeCCChhHHHH
Q 003313 549 KYEI----VKILQEKKHVVGMTGDGVNDAPALKKADI---GIAVAGA-TEAAR-GAADIVLTEPGLSVICS 610 (831)
Q Consensus 549 K~~i----v~~l~~~g~~v~~iGDG~ND~~al~~Adv---gIa~~~~-~~~a~-~aadivl~~~~~~~i~~ 610 (831)
|..+ .+.+.-..+.++++||+.||+.|.++|++ ++++|.+ .+..+ ..+|+++. ++..+..
T Consensus 139 ~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~--~~~el~~ 207 (210)
T 2ah5_A 139 KADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLA 207 (210)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHH
T ss_pred ChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHH
Confidence 3233 23333334579999999999999999998 6666754 33333 36899884 4555544
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.47 E-value=6.3e-05 Score=78.11 Aligned_cols=124 Identities=15% Similarity=0.159 Sum_probs=84.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.++++.|++.|+++.++|+.... ...+.+.+|+.... ..++.+. .. ....-.|+-
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f--~~~~~~~-----------~~-----~~~Kp~~~~ 166 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHF--DFVLTSE-----------AA-----GWPKPDPRI 166 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGC--SCEEEHH-----------HH-----SSCTTSHHH
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhh--hEEEeec-----------cc-----CCCCCCHHH
Confidence 36799999999999999999999987664 57778888874311 0111000 00 011223444
Q ss_pred HHHHHHHHhhcCCEEEEEcCCc-cChhhhccCCeeEEecCchHH------HhhhcCEEEeCCChhHHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGV-NDAPALKKADIGIAVAGATEA------ARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~-ND~~al~~AdvgIa~~~~~~~------a~~aadivl~~~~~~~i~~~i~ 613 (831)
-..+.+.+.-..+.++||||+. ||+.|.+.|++++++.+.... ....+|+++ +++..+...+.
T Consensus 167 ~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~--~~l~el~~~l~ 236 (263)
T 3k1z_A 167 FQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHIL--PSLAHLLPALD 236 (263)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEE--SSGGGHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEe--CCHHHHHHHHH
Confidence 4556666665567899999997 999999999999999532211 223689888 56887777764
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00033 Score=71.81 Aligned_cols=117 Identities=12% Similarity=0.004 Sum_probs=81.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEe--Ch
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDV--FA 546 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~P 546 (831)
++.+++.+.++.|+ .|+++.++|+.....+....+.+|+.... .. +++.- .|
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~-----------------------i~~~~kp~~ 165 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLF--PR-----------------------IEVVSEKDP 165 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTC--CC-----------------------EEEESCCSH
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhC--ce-----------------------eeeeCCCCH
Confidence 45799999999999 99999999999988888888888874311 01 12222 23
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCc-cChhhhccCCeeEEec-CchH--------HHhhhcCE-EEeCCChhHHHHHHH
Q 003313 547 EHKYEIVKILQEKKHVVGMTGDGV-NDAPALKKADIGIAVA-GATE--------AARGAADI-VLTEPGLSVICSAVL 613 (831)
Q Consensus 547 ~~K~~iv~~l~~~g~~v~~iGDG~-ND~~al~~AdvgIa~~-~~~~--------~a~~aadi-vl~~~~~~~i~~~i~ 613 (831)
+--..+.+.+.-..+.++++||+. ||..|.+.|++++++- .|.. .....+|+ ++ +++..+...+.
T Consensus 166 ~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 241 (251)
T 2pke_A 166 QTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREV--PDPSGWPAAVR 241 (251)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEEC--SSGGGHHHHHH
T ss_pred HHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeee--CCHHHHHHHHH
Confidence 333455555555567899999999 9999999999998872 2211 11345787 66 55777776653
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00027 Score=69.48 Aligned_cols=99 Identities=10% Similarity=0.075 Sum_probs=70.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|++.| ++.++|+........+.+.+|+.... ..++.+.+. ....-.|+-
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f--~~~~~~~~~----------------~~~Kp~~~~ 146 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFL--LAFFTSSAL----------------GVMKPNPAM 146 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTC--SCEEEHHHH----------------SCCTTCHHH
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhc--ceEEeeccc----------------CCCCCCHHH
Confidence 36789999999999999 99999999999888888899874311 111110000 011122333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEec
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA 586 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~ 586 (831)
-..+++.+.-..+.++++||+.||+.|.+.|++...+-
T Consensus 147 ~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~ 184 (200)
T 3cnh_A 147 YRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQC 184 (200)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEE
Confidence 34455555555567999999999999999999998874
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0013 Score=65.54 Aligned_cols=123 Identities=15% Similarity=0.078 Sum_probs=79.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.++++.|++.|+++.++|+.+...+....+.+|+.... ..++...+.. ...-.|+-
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~f--d~~~~~~~~~----------------~~KP~p~~ 145 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYF--DVMVFGDQVK----------------NGKPDPEI 145 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECGGGSS----------------SCTTSTHH
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccc--cccccccccC----------------CCcccHHH
Confidence 35689999999999999999999999999999999999985311 1111111110 11122333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeE----Eec-CchHHHhhh-cCEEEeCCChhHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI----AVA-GATEAARGA-ADIVLTEPGLSVICSAV 612 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgI----a~~-~~~~~a~~a-adivl~~~~~~~i~~~i 612 (831)
=....+.+.-..+.++||||..+|+.+-++|++.. .-| +..+..+++ ++.+. + ...+.+.+
T Consensus 146 ~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~-~--~~eli~~l 212 (216)
T 3kbb_A 146 YLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV-K--PEEILNVL 212 (216)
T ss_dssp HHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE-C--GGGHHHHH
T ss_pred HHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC-C--HHHHHHHH
Confidence 34455556555667999999999999999999753 223 233334444 45544 3 34455444
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.10 E-value=7.6e-05 Score=74.22 Aligned_cols=102 Identities=7% Similarity=-0.000 Sum_probs=68.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH------hCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEE
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRR------LGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFT 542 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 542 (831)
++.|++.+.++.|++ |+++.++|+........+.+. .|+.... ..++... .. ...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f--~~~~~~~-----------~~-----~~~ 149 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFF--DKVYASC-----------QM-----GKY 149 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGS--SEEEEHH-----------HH-----TCC
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHc--CeEEeec-----------cc-----CCC
Confidence 467899999999999 999999999888777766665 4553110 0011000 00 011
Q ss_pred EeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCch
Q 003313 543 DVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGAT 589 (831)
Q Consensus 543 ~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~ 589 (831)
.-.|+--..+++.+.-..+.++++||+.||..|.+.|+++.++.++.
T Consensus 150 Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~ 196 (211)
T 2i6x_A 150 KPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNG 196 (211)
T ss_dssp TTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred CCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCH
Confidence 12233334555555555677999999999999999999999987543
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00018 Score=74.70 Aligned_cols=57 Identities=19% Similarity=0.323 Sum_probs=48.0
Q ss_pred HHHHHHHHH-hhcCCEEEEEcC----CccChhhhccCC-eeEEecCchHHHhhhcCEEEeCCC
Q 003313 548 HKYEIVKIL-QEKKHVVGMTGD----GVNDAPALKKAD-IGIAVAGATEAARGAADIVLTEPG 604 (831)
Q Consensus 548 ~K~~iv~~l-~~~g~~v~~iGD----G~ND~~al~~Ad-vgIa~~~~~~~a~~aadivl~~~~ 604 (831)
+|..-++.+ .-..+.|+++|| +.||.+||+.|+ +|++|+||.+..|+.||+|+.+++
T Consensus 197 sKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 197 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPETA 259 (262)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTTC-
T ss_pred CHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCCCc
Confidence 588888777 113467999999 999999999999 699999999999999999886554
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0022 Score=63.38 Aligned_cols=120 Identities=8% Similarity=-0.043 Sum_probs=74.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.++++.|+++|+++.++||.....+..+.+ .. ...++.+.+.. ...-.|+-
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~----~d~v~~~~~~~----------------~~KP~p~~ 92 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PV----NDWMIAAPRPT----------------AGWPQPDA 92 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TT----TTTCEECCCCS----------------SCTTSTHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---cc----CCEEEECCcCC----------------CCCCChHH
Confidence 567999999999999999999999998877754443 10 11112111110 01112222
Q ss_pred HHHHHHHHhhc-CCEEEEEcCCccChhhhccCCe-eEEecCch---------------------------HHHhhhcCEE
Q 003313 549 KYEIVKILQEK-KHVVGMTGDGVNDAPALKKADI-GIAVAGAT---------------------------EAARGAADIV 599 (831)
Q Consensus 549 K~~iv~~l~~~-g~~v~~iGDG~ND~~al~~Adv-gIa~~~~~---------------------------~~a~~aadiv 599 (831)
=....+.+.-. .+.++||||..+|+.+-++|++ .|++..|. +.....+|++
T Consensus 93 ~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~v 172 (196)
T 2oda_A 93 CWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHSV 172 (196)
T ss_dssp HHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCEE
Confidence 23333444332 2568999999999999999997 45553221 0112358998
Q ss_pred EeCCChhHHHHHHH
Q 003313 600 LTEPGLSVICSAVL 613 (831)
Q Consensus 600 l~~~~~~~i~~~i~ 613 (831)
+ +++..+...+.
T Consensus 173 i--~~~~eL~~~l~ 184 (196)
T 2oda_A 173 I--DHLGELESCLA 184 (196)
T ss_dssp E--SSGGGHHHHHH
T ss_pred e--CCHHHHHHHHH
Confidence 8 56887776663
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00026 Score=71.23 Aligned_cols=108 Identities=19% Similarity=0.043 Sum_probs=64.9
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHH
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHL---------------AIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVD 532 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 532 (831)
.++.|++.+++++|+++|+++.++|+... ..+....+++|+... ..+....... ..+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~----~~~~~~~~~~---g~~~ 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD----MVLACAYHEA---GVGP 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS----EEEEECCCTT---CCST
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCcee----eEEEeecCCC---Ccee
Confidence 56789999999999999999999999887 577778888887411 0000000000 0000
Q ss_pred HHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeE
Q 003313 533 ELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI 583 (831)
Q Consensus 533 ~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgI 583 (831)
+.... .....-.|+-=..+.+.+.-..+.++||||+.||+.+.+.|++..
T Consensus 128 ~~~~~-~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 128 LAIPD-HPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp TCCSS-CTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred ecccC-CccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 00000 000001111222334444434567999999999999999999865
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0014 Score=67.83 Aligned_cols=123 Identities=11% Similarity=0.106 Sum_probs=82.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.++++.|++ |+++.++|+.....+..+.+.+|+.... ..++.+.+.. ...-.|+-
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~----------------~~KP~p~~ 181 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF--DAIVIGGEQK----------------EEKPAPSI 181 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGSS----------------SCTTCHHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhh--heEEecCCCC----------------CCCCCHHH
Confidence 567899999999998 5999999999999888888999985311 1111111110 01112333
Q ss_pred HHHHHHHHhhcCCEEEEEcCC-ccChhhhccCCe--eEEecCchH---HHhhhcCEEEeCCChhHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDG-VNDAPALKKADI--GIAVAGATE---AARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG-~ND~~al~~Adv--gIa~~~~~~---~a~~aadivl~~~~~~~i~~~i 612 (831)
-....+.+.-..+.++||||+ .||+.+-++|++ .|.+..+.. .....+|+++ +++..+...+
T Consensus 182 ~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i--~~~~el~~~l 249 (260)
T 2gfh_A 182 FYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALL 249 (260)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEE--CCHHHHHHHH
Confidence 344455555455679999995 999999999999 677753321 1234588887 4577776655
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0011 Score=68.58 Aligned_cols=42 Identities=10% Similarity=0.052 Sum_probs=34.6
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHhCCC
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITG---DHLAIAKETGRRLGIG 509 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TG---D~~~~a~~ia~~~gi~ 509 (831)
+.+-+++.++|++++++|++++++|| +.........+++|+.
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 33446899999999999999999988 6667777777888875
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.87 E-value=0.001 Score=68.86 Aligned_cols=43 Identities=16% Similarity=0.247 Sum_probs=35.5
Q ss_pred cCCCCCChHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHhCCC
Q 003313 467 FDPPRHDSSDTIHRALKLGVCVKMITG---DHLAIAKETGRRLGIG 509 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi~v~m~TG---D~~~~a~~ia~~~gi~ 509 (831)
.+.+-+++.++|++++++|++++++|| +.........+++|+.
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 445567899999999999999999999 6666666677788875
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.79 E-value=0.00037 Score=71.56 Aligned_cols=52 Identities=17% Similarity=0.248 Sum_probs=42.6
Q ss_pred HHHHHHHHH-hhcCCEEEEEcC----CccChhhhccCCe-eEEecCchHHHhhhcCEE
Q 003313 548 HKYEIVKIL-QEKKHVVGMTGD----GVNDAPALKKADI-GIAVAGATEAARGAADIV 599 (831)
Q Consensus 548 ~K~~iv~~l-~~~g~~v~~iGD----G~ND~~al~~Adv-gIa~~~~~~~a~~aadiv 599 (831)
+|..-++.+ .-..+.|+++|| |.||.+||+.|+. |++|+|+.+..|+.||+|
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHHhhc
Confidence 577777766 223468999999 9999999999988 999999999999999976
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0039 Score=68.14 Aligned_cols=136 Identities=15% Similarity=0.097 Sum_probs=80.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCC-ccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPS-SLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+... .+. .++.+.+... -.+......-...-.|+
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~-Fd~~~Ivs~ddv~~-----~~~~~~~~kp~~KP~P~ 288 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPY-FEADFIATASDVLE-----AENMYPQARPLGKPNPF 288 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGG-SCGGGEECHHHHHH-----HHHHSTTSCCCCTTSTH
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHh-cCCCEEEecccccc-----cccccccccCCCCCCHH
Confidence 5778999999999999999999999999999999899998532 110 2222111000 00000000000111121
Q ss_pred HHHHHHHHHh--------------hcCCEEEEEcCCccChhhhccCCeeE-EecCch-------HHHhhhcCEEEeCCCh
Q 003313 548 HKYEIVKILQ--------------EKKHVVGMTGDGVNDAPALKKADIGI-AVAGAT-------EAARGAADIVLTEPGL 605 (831)
Q Consensus 548 ~K~~iv~~l~--------------~~g~~v~~iGDG~ND~~al~~AdvgI-a~~~~~-------~~a~~aadivl~~~~~ 605 (831)
-=....+.+. -....++||||+.+|+.|-++|++.. ++..|. +.....||+++ +++
T Consensus 289 ~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi--~sl 366 (384)
T 1qyi_A 289 SYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHL 366 (384)
T ss_dssp HHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE--SSG
T ss_pred HHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEE--CCH
Confidence 1112222221 12467999999999999999999863 443321 22234689988 457
Q ss_pred hHHHHHH
Q 003313 606 SVICSAV 612 (831)
Q Consensus 606 ~~i~~~i 612 (831)
..+...+
T Consensus 367 ~eL~~~l 373 (384)
T 1qyi_A 367 GELRGVL 373 (384)
T ss_dssp GGHHHHH
T ss_pred HHHHHHH
Confidence 7777665
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0012 Score=66.24 Aligned_cols=118 Identities=18% Similarity=0.173 Sum_probs=74.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.|++. +++.++|+.... .+.+|+... . ..++.. +.. -...-.|+-
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~-f-~~~~~~-----------~~~-----~~~kp~~~~ 160 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADY-F-AFALCA-----------EDL-----GIGKPDPAP 160 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGG-C-SEEEEH-----------HHH-----TCCTTSHHH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHH-e-eeeEEc-----------ccc-----CCCCcCHHH
Confidence 4678999999999998 999999987654 233444210 0 000000 000 001112333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCc-cChhhhccCCeeEEe---c-CchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGV-NDAPALKKADIGIAV---A-GATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~-ND~~al~~AdvgIa~---~-~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
-..+.+.+.-..+.++++||+. ||+.|.+.|+++.++ + +..+. +..+|+++ +++..+...+.
T Consensus 161 ~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~--~~l~el~~~l~ 227 (230)
T 3vay_A 161 FLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEI--HNLSQLPEVLA 227 (230)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEE--SSGGGHHHHHH
T ss_pred HHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeE--CCHHHHHHHHH
Confidence 3455555555567799999997 999999999999887 2 22222 56789998 56888877663
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.00046 Score=63.23 Aligned_cols=98 Identities=12% Similarity=0.078 Sum_probs=65.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+++++|++.|+++.++|+.....+..+.+.+|+.... ..++...+. ....-.|+-
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~----------------~~~Kp~~~~ 79 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVV--DKVLLSGEL----------------GVEKPEEAA 79 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSS--SEEEEHHHH----------------SCCTTSHHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhc--cEEEEeccC----------------CCCCCCHHH
Confidence 46688999999999999999999999888888888888874311 111100000 001112333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEE
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA 584 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa 584 (831)
-..+.+.+....+.++|+||+.+|..+.++|++...
T Consensus 80 ~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i 115 (137)
T 2pr7_A 80 FQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGV 115 (137)
T ss_dssp HHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEE
T ss_pred HHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEE
Confidence 334444444444579999999999999999987433
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.65 E-value=8.5e-05 Score=73.48 Aligned_cols=102 Identities=11% Similarity=0.067 Sum_probs=62.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-hCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRR-LGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
++.|++.+.++.|++.|+++.++|+........+.+. .|+... . ..++.+. .. ....-.|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~-f-~~~~~~~-----------~~-----~~~Kp~~~ 152 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA-A-DHIYLSQ-----------DL-----GMRKPEAR 152 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH-C-SEEEEHH-----------HH-----TCCTTCHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhh-e-eeEEEec-----------cc-----CCCCCCHH
Confidence 4678999999999999999999998664432222111 221100 0 0000000 00 00111233
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCc
Q 003313 548 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGA 588 (831)
Q Consensus 548 ~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~ 588 (831)
--..+++.+.-..+.++++||+.||..|.+.|++...+.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~ 193 (206)
T 2b0c_A 153 IYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKD 193 (206)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCS
T ss_pred HHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecC
Confidence 34455666655567899999999999999999999887643
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0074 Score=62.39 Aligned_cols=42 Identities=12% Similarity=-0.008 Sum_probs=37.0
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHhCCC
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMIT---GDHLAIAKETGRRLGIG 509 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~T---GD~~~~a~~ia~~~gi~ 509 (831)
+++-+++.++++++++.|++++++| |+.........+++|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5667899999999999999999999 88888888888888875
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0025 Score=65.38 Aligned_cols=84 Identities=14% Similarity=0.077 Sum_probs=63.0
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEE
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHL----AIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTD 543 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 543 (831)
.++.|++.+.++.|++.|+++.++||... ..+..-.+++||..- ... .++.+
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~--~~~----------------------~Lilr 155 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGV--NDK----------------------TLLLK 155 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCC--STT----------------------TEEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcc--ccc----------------------eeEec
Confidence 46779999999999999999999999965 467777788999631 000 12333
Q ss_pred eChHHHHHHHHHHhh-cCCEEEEEcCCccChhh
Q 003313 544 VFAEHKYEIVKILQE-KKHVVGMTGDGVNDAPA 575 (831)
Q Consensus 544 ~~P~~K~~iv~~l~~-~g~~v~~iGDG~ND~~a 575 (831)
-...+|....+.+.+ .-.+|+++||..+|.++
T Consensus 156 ~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 156 KDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp SSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred CCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 233567777777777 35679999999999987
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0014 Score=65.99 Aligned_cols=106 Identities=9% Similarity=-0.018 Sum_probs=69.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH------hCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEE
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRR------LGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFT 542 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 542 (831)
++.|++.++++.|++. +++.++|+........+.+. .|+... . ..++... +. ...
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~-f-d~i~~~~-----------~~-----~~~ 172 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDY-F-EKTYLSY-----------EM-----KMA 172 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHH-C-SEEEEHH-----------HH-----TCC
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHh-C-CEEEeec-----------cc-----CCC
Confidence 3668999999999999 99999999998887766643 333110 0 0000000 00 011
Q ss_pred EeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHh
Q 003313 543 DVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAAR 593 (831)
Q Consensus 543 ~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~ 593 (831)
.-.|+--..+.+.+.-..+.++++||+.||+.|.+.|+++.++.++.+..+
T Consensus 173 KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k 223 (229)
T 4dcc_A 173 KPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGEDWS 223 (229)
T ss_dssp TTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGG
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHH
Confidence 223344445666666566789999999999999999999999875443333
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0052 Score=62.91 Aligned_cols=116 Identities=11% Similarity=0.044 Sum_probs=76.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|++.|+++.+.|+.. .+..+-+.+|+.... ..++.+.+.. ...-.|+-
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~F--d~i~~~~~~~----------------~~KP~p~~ 175 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKF--DFIADAGKCK----------------NNKPHPEI 175 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGC--SEECCGGGCC----------------SCTTSSHH
T ss_pred ccchhHHHHHHHHHhcccccccccccc--hhhhHhhhccccccc--ceeecccccC----------------CCCCcHHH
Confidence 467999999999999999999877654 345667888985311 1122111111 11223333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCe-eEEecCchHHHhhhcCEEEeCCChhHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVAGATEAARGAADIVLTEPGLSVI 608 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Adv-gIa~~~~~~~a~~aadivl~~~~~~~i 608 (831)
=...++.+.-..+.++||||..+|+.+-++|++ .|++++..+. ..||+++. ++..+
T Consensus 176 ~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~--~~ad~vi~--~l~eL 232 (250)
T 4gib_A 176 FLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYENL--KKANLVVD--STNQL 232 (250)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTTT--TTSSEEES--SGGGC
T ss_pred HHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChhHh--ccCCEEEC--ChHhC
Confidence 445556665556779999999999999999998 5666654332 35899984 45554
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.033 Score=56.91 Aligned_cols=40 Identities=20% Similarity=0.172 Sum_probs=35.3
Q ss_pred CCCChHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHhCCC
Q 003313 470 PRHDSSDTIHRALKLGVCVKMIT---GDHLAIAKETGRRLGIG 509 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~T---GD~~~~a~~ia~~~gi~ 509 (831)
+-+++.++++.+++.|+++.++| |..........+++|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 56789999999999999999999 99988888888888874
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.17 E-value=0.003 Score=64.97 Aligned_cols=84 Identities=13% Similarity=0.038 Sum_probs=61.5
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEE
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHL----AIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTD 543 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 543 (831)
.++.|++.+.++.|++.|+++.++||... ..+..-.+++||..- ... .++.+
T Consensus 100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~--~~~----------------------~Lilr 155 (262)
T 3ocu_A 100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGV--EES----------------------AFYLK 155 (262)
T ss_dssp CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCC--SGG----------------------GEEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcc--ccc----------------------ceecc
Confidence 46779999999999999999999999865 466777788999631 100 02333
Q ss_pred eChHHHHHHHHHHhhc-CCEEEEEcCCccChhh
Q 003313 544 VFAEHKYEIVKILQEK-KHVVGMTGDGVNDAPA 575 (831)
Q Consensus 544 ~~P~~K~~iv~~l~~~-g~~v~~iGDG~ND~~a 575 (831)
-.-..|....+.+.+. -.+|+++||..+|.++
T Consensus 156 ~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 156 KDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp SSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred CCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 2234566677777666 4579999999999986
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=95.83 E-value=0.0083 Score=60.44 Aligned_cols=113 Identities=9% Similarity=0.051 Sum_probs=72.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|++.| ++.++|+.....+..+.+.+|+.... .. .+... ..
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f-~~-----------------------~~~~~---~~ 147 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEV-EG-----------------------RVLIY---IH 147 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHT-TT-----------------------CEEEE---SS
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhc-Ce-----------------------eEEec---CC
Confidence 57899999999999999 99999999988888888888874210 00 00111 12
Q ss_pred HHHHHHHHh--hcCCEEEEEcCCcc---ChhhhccCCee-EEecCc-----hHHHhhh--cCEEEeCCChhHHHHH
Q 003313 549 KYEIVKILQ--EKKHVVGMTGDGVN---DAPALKKADIG-IAVAGA-----TEAARGA--ADIVLTEPGLSVICSA 611 (831)
Q Consensus 549 K~~iv~~l~--~~g~~v~~iGDG~N---D~~al~~Advg-Ia~~~~-----~~~a~~a--adivl~~~~~~~i~~~ 611 (831)
|....+.+. -..+.++|+||+.| |..+-+.|++. |.+..| .+..++. +|+++ +++..+...
T Consensus 148 K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i--~~~~el~~~ 221 (231)
T 2p11_A 148 KELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTV--ERIGDLVEM 221 (231)
T ss_dssp GGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEE--SSGGGGGGC
T ss_pred hHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceee--cCHHHHHHH
Confidence 222333222 24568999999999 66666777764 333322 2233333 89888 446655443
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.82 E-value=0.011 Score=59.11 Aligned_cols=95 Identities=9% Similarity=-0.013 Sum_probs=60.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|+++|+++.++|+... .+..+.+.+|+.... ..++...+. -...-.|+-
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f--~~~~~~~~~----------------~~~Kp~~~~ 155 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYF--DALALSYEI----------------KAVKPNPKI 155 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGC--SEEC---------------------------CCH
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHe--eEEEecccc----------------CCCCCCHHH
Confidence 4679999999999999999999999866 477888888975311 111111000 011112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcc-ChhhhccCCeeEEe
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVN-DAPALKKADIGIAV 585 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~N-D~~al~~AdvgIa~ 585 (831)
-..+.+.+.-. . +|+||+.+ |+.+-+.|++....
T Consensus 156 ~~~~~~~~~~~--~-~~vgD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 156 FGFALAKVGYP--A-VHVGDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp HHHHHHHHCSS--E-EEEESSCCCCCCCSSSCSEEEEE
T ss_pred HHHHHHHcCCC--e-EEEcCCchHhHHHHHHCCCeEEE
Confidence 23334444322 3 99999999 99999999998664
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=95.37 E-value=0.0067 Score=58.62 Aligned_cols=100 Identities=12% Similarity=0.033 Sum_probs=61.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHhCCCCCCCCCccccC-----CcCCCCCc
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGD---------------HLAIAKETGRRLGIGTNMYPSSLLLG-----RDKDENEA 528 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD---------------~~~~a~~ia~~~gi~~~~~~~~~~~~-----~~~~~~~~ 528 (831)
++.|++.+++++|++.|+++.++|+- ....+..+.+.+|+.. ..++.. .+.....
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f----d~v~~s~~~~~~~~~~~K- 116 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQF----DEVLICPHLPADECDCRK- 116 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCE----EEEEEECCCGGGCCSSST-
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCe----eEEEEcCCCCcccccccC-
Confidence 57899999999999999999999997 4566777888888751 111111 0000000
Q ss_pred ccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeE-EecCc
Q 003313 529 LPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI-AVAGA 588 (831)
Q Consensus 529 ~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgI-a~~~~ 588 (831)
-.|+-=..+.+.+.-..+.++||||+.+|+.+-++|++.. .+..+
T Consensus 117 ---------------P~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 117 ---------------PKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp ---------------TSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred ---------------CCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 0010001112222223456899999999999999999864 44443
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=95.32 E-value=0.0038 Score=64.04 Aligned_cols=57 Identities=21% Similarity=0.266 Sum_probs=45.8
Q ss_pred EEEeChH--HHHHHHHHHhhcCCEEEEEcC----CccChhhhccCC-eeEEecCchHHHhhhcC
Q 003313 541 FTDVFAE--HKYEIVKILQEKKHVVGMTGD----GVNDAPALKKAD-IGIAVAGATEAARGAAD 597 (831)
Q Consensus 541 ~~~~~P~--~K~~iv~~l~~~g~~v~~iGD----G~ND~~al~~Ad-vgIa~~~~~~~a~~aad 597 (831)
+-++.|. +|..-++.+.+..+.|+++|| |.||.+||+.|+ +|++|+++.|..+..++
T Consensus 178 ~leI~~~gv~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~~~ 241 (246)
T 3f9r_A 178 SFDVFPVGWDKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVEK 241 (246)
T ss_dssp EEEEEETTCSGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHHHH
T ss_pred EEEEEeCCCCHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHHHH
Confidence 3444443 688888877766678999999 799999999996 89999999988876543
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=95.25 E-value=0.002 Score=65.19 Aligned_cols=49 Identities=12% Similarity=0.103 Sum_probs=34.7
Q ss_pred HHHHhhcCCEEEEEcCC-ccChhhhccCCeeEEe---cCch-HHHh---hhcCEEEe
Q 003313 553 VKILQEKKHVVGMTGDG-VNDAPALKKADIGIAV---AGAT-EAAR---GAADIVLT 601 (831)
Q Consensus 553 v~~l~~~g~~v~~iGDG-~ND~~al~~AdvgIa~---~~~~-~~a~---~aadivl~ 601 (831)
.+.+.-..+.++++||+ .||..|++.|++++++ |.+. +..+ ..+|+++.
T Consensus 186 ~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~ 242 (250)
T 2c4n_A 186 LNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYP 242 (250)
T ss_dssp HHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEES
T ss_pred HHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEEC
Confidence 33343345679999999 7999999999999665 4433 3333 46898874
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=95.17 E-value=0.028 Score=57.83 Aligned_cols=40 Identities=15% Similarity=0.118 Sum_probs=35.3
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHhCCC
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMIT---GDHLAIAKETGRRLGIG 509 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~T---GD~~~~a~~ia~~~gi~ 509 (831)
++ +++.++|++++++|++++++| |+.........+++|+.
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~ 64 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVE 64 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 45 899999999999999999999 78888888888888885
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=94.50 E-value=0.027 Score=58.05 Aligned_cols=41 Identities=20% Similarity=0.169 Sum_probs=34.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHhCCC
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDH---LAIAKETGRRLGIG 509 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~---~~~a~~ia~~~gi~ 509 (831)
++.|++.++++.|++.|+++.++||.. ...+...-+.+|+.
T Consensus 101 ~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 101 EALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 567899999999999999999999988 34445555778885
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=94.49 E-value=0.019 Score=60.57 Aligned_cols=98 Identities=12% Similarity=-0.034 Sum_probs=67.1
Q ss_pred cccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHH---HHHHHH--------hCCCCCCCCCccccCCcCCCCCcccHHH
Q 003313 465 PLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIA---KETGRR--------LGIGTNMYPSSLLLGRDKDENEALPVDE 533 (831)
Q Consensus 465 ~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a---~~ia~~--------~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (831)
..++++.|++.++++.|+++|+++.++||.....+ ...-+. .|+.. ..++.+.+..
T Consensus 184 ~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~--------- 250 (301)
T 1ltq_A 184 CDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL----VMQCQREQGD--------- 250 (301)
T ss_dssp GGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC----SEEEECCTTC---------
T ss_pred ccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCc----hheeeccCCC---------
Confidence 34678899999999999999999999999985432 333334 67721 1112111100
Q ss_pred HHHhcCcEEEeChHHHHHHHHHHhhcC-CEEEEEcCCccChhhhccCCeeE
Q 003313 534 LIEKADGFTDVFAEHKYEIVKILQEKK-HVVGMTGDGVNDAPALKKADIGI 583 (831)
Q Consensus 534 ~~~~~~v~~~~~P~~K~~iv~~l~~~g-~~v~~iGDG~ND~~al~~AdvgI 583 (831)
.+-.|+-|..+.+.+.... +.++|+||..+|+.|-++|++-.
T Consensus 251 --------~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~ 293 (301)
T 1ltq_A 251 --------TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVEC 293 (301)
T ss_dssp --------CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred --------CcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeE
Confidence 1223666777777775444 34689999999999999999853
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=94.17 E-value=0.033 Score=57.41 Aligned_cols=113 Identities=13% Similarity=0.017 Sum_probs=71.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh---CCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeC
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRL---GIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVF 545 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~---gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 545 (831)
++.|++.++++.|+++|+++.++|+-+...+..+-+.+ |+... . ..++.. + +...-.
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~-f-d~i~~~-~-----------------~~~KP~ 189 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILEL-V-DGHFDT-K-----------------IGHKVE 189 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGG-C-SEEECG-G-----------------GCCTTC
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhh-c-cEEEec-C-----------------CCCCCC
Confidence 67899999999999999999999999988777766543 35321 0 011110 0 111112
Q ss_pred hHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeE-Eec-Cch---HHHhhhcCEEEe
Q 003313 546 AEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI-AVA-GAT---EAARGAADIVLT 601 (831)
Q Consensus 546 P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgI-a~~-~~~---~~a~~aadivl~ 601 (831)
|+-=..+.+.+.-..+.++||||..+|+.+-++|++-. .+. .+. +.....+|.++.
T Consensus 190 p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~ 250 (261)
T 1yns_A 190 SESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 250 (261)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred HHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEEC
Confidence 22224455555555668999999999999999999854 342 121 112235677763
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=93.99 E-value=0.03 Score=59.69 Aligned_cols=114 Identities=12% Similarity=0.136 Sum_probs=70.6
Q ss_pred cCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh----CCCCCCCCCccccCCcCCCCC-----cccH-HHHHH
Q 003313 467 FDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRL----GIGTNMYPSSLLLGRDKDENE-----ALPV-DELIE 536 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~----gi~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~ 536 (831)
...+.+++.+.++.|+++|++|+++||-....++.+|..+ ||+. +.+.|....... ...- .+...
T Consensus 141 ~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~-----e~ViG~~~~~~~~~~~~~~~~~~~~~d 215 (327)
T 4as2_A 141 PPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKP-----ENVIGVTTLLKNRKTGELTTARKQIAE 215 (327)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCG-----GGEEEECEEEECTTTCCEECHHHHHHT
T ss_pred ccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCH-----HHeEeeeeeeecccccccccccccccc
Confidence 3457789999999999999999999999999999999885 5542 222222111000 0000 00000
Q ss_pred ---------hcCcEEE-----eChHHHHHHHHHHhhc-CCEEEEEcCC-ccChhhhcc--CCeeEEe
Q 003313 537 ---------KADGFTD-----VFAEHKYEIVKILQEK-KHVVGMTGDG-VNDAPALKK--ADIGIAV 585 (831)
Q Consensus 537 ---------~~~v~~~-----~~P~~K~~iv~~l~~~-g~~v~~iGDG-~ND~~al~~--AdvgIa~ 585 (831)
+.....+ +--+.|..-|+..... ...+++.||+ ..|.+||.. ++.|+++
T Consensus 216 g~y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L 282 (327)
T 4as2_A 216 GKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHL 282 (327)
T ss_dssp TCCCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEE
T ss_pred ccccccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEE
Confidence 0001111 2236788877766543 3578999999 479999954 4455544
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=93.37 E-value=0.076 Score=53.81 Aligned_cols=109 Identities=8% Similarity=-0.059 Sum_probs=70.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|++.|+++.++|+... +..+-+.+|+... -..++.+.+.. ...-.|+-
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~--fd~i~~~~~~~----------------~~KP~p~~ 154 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREF--FTFCADASQLK----------------NSKPDPEI 154 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGG--CSEECCGGGCS----------------SCTTSTHH
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccc--ccccccccccc----------------CCCCcHHH
Confidence 4679999999999999999999998654 4556677887531 11112111111 11112333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCee-EEecCchHHHhhhcCEEEe
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG-IAVAGATEAARGAADIVLT 601 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg-Ia~~~~~~~a~~aadivl~ 601 (831)
=....+.+.-..+.++||||..+|+.+-++|++- |+++.|. ..+|.++.
T Consensus 155 ~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~----~~ad~~~~ 204 (243)
T 4g9b_A 155 FLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGL----TGAQLLLP 204 (243)
T ss_dssp HHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTC----CSCSEEES
T ss_pred HHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCC----CcHHHhcC
Confidence 3444555555567899999999999999999974 4455442 24666653
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=93.35 E-value=0.16 Score=53.50 Aligned_cols=43 Identities=14% Similarity=0.151 Sum_probs=35.3
Q ss_pred cCCCCCChHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHhCCC
Q 003313 467 FDPPRHDSSDTIHRALKLGVCVKMIT---GDHLAIAKETGRRLGIG 509 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi~v~m~T---GD~~~~a~~ia~~~gi~ 509 (831)
.+++-+++.+++++|++.|++++++| |..........+++|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 45667899999999999999999999 57776666666777775
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=92.40 E-value=0.8 Score=46.15 Aligned_cols=43 Identities=16% Similarity=0.170 Sum_probs=31.3
Q ss_pred cCCCCCChHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHhCCC
Q 003313 467 FDPPRHDSSDTIHRALKLGVCVKMIT---GDHLAIAKETGRRLGIG 509 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi~v~m~T---GD~~~~a~~ia~~~gi~ 509 (831)
.++.-+++.++++.+++.|+++.++| |..........+++|+.
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~ 66 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE 66 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCC
Confidence 45555789999999999999999999 55555555555566764
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=90.58 E-value=0.059 Score=53.60 Aligned_cols=88 Identities=18% Similarity=0.160 Sum_probs=53.2
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHH----HHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEe-
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLAIAKE----TGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDV- 544 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~----ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~- 544 (831)
+.+++.+.++.|+++|+++.++|+.....+.. +.+..+... .+.... .+...
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~--------~~~~~~---------------~~~~~K 145 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA--------TNMNPV---------------IFAGDK 145 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT--------TTBCCC---------------EECCCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc--------cccchh---------------hhcCCC
Confidence 46789999999999999999999987442222 333233210 000000 01111
Q ss_pred -ChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEE
Q 003313 545 -FAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA 584 (831)
Q Consensus 545 -~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa 584 (831)
.|+-..+. +++.|- ++|+||..+|+.+-++|++-..
T Consensus 146 P~p~~~~~~---~~~~g~-~l~VGDs~~Di~aA~~aG~~~i 182 (211)
T 2b82_A 146 PGQNTKSQW---LQDKNI-RIFYGDSDNDITAARDVGARGI 182 (211)
T ss_dssp TTCCCSHHH---HHHTTE-EEEEESSHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHH---HHHCCC-EEEEECCHHHHHHHHHCCCeEE
Confidence 12222333 333343 9999999999999999998543
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=89.34 E-value=0.4 Score=44.19 Aligned_cols=40 Identities=15% Similarity=-0.018 Sum_probs=33.7
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHhCCC
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDH---LAIAKETGRRLGIG 509 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~---~~~a~~ia~~~gi~ 509 (831)
+-+++.++|++++++|++++++||++ ...+....++.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 34789999999999999999999998 45666677778875
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=89.25 E-value=0.015 Score=56.88 Aligned_cols=40 Identities=18% Similarity=0.160 Sum_probs=34.1
Q ss_pred CCCCChHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHhCC
Q 003313 469 PPRHDSSDTIHRALKL-GVCVKMITGDHLAIAKETGRRLGI 508 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~-Gi~v~m~TGD~~~~a~~ia~~~gi 508 (831)
++.|++.+++++|+++ |+++.++|+.....+..+.+.+|+
T Consensus 73 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 73 EPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred ccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 5789999999999999 999999999887766666666664
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=88.86 E-value=0.51 Score=53.22 Aligned_cols=98 Identities=7% Similarity=-0.034 Sum_probs=60.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCC------CHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEE
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGD------HLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFT 542 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 542 (831)
++.+++.++++.|+++|+++.++|+- ......... .|+... . ..++.+.+.. ..
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~--~~l~~~-f-d~i~~~~~~~----------------~~ 159 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM--CELKMH-F-DFLIESCQVG----------------MV 159 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH--HHHHTT-S-SEEEEHHHHT----------------CC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh--hhhhhh-e-eEEEeccccC----------------CC
Confidence 57789999999999999999999995 222222211 133210 0 1111111000 11
Q ss_pred EeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEec
Q 003313 543 DVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA 586 (831)
Q Consensus 543 ~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~ 586 (831)
.-.|+-=....+.+.-..+.+++|||..||+.+.+.|++....-
T Consensus 160 KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 160 KPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred CCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 12233334455555555667999999999999999999987763
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=85.37 E-value=0.46 Score=52.38 Aligned_cols=40 Identities=10% Similarity=0.108 Sum_probs=33.5
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCC------------HHHHHHHHHHhCCC
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDH------------LAIAKETGRRLGIG 509 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~------------~~~a~~ia~~~gi~ 509 (831)
+-|++.++++.|+++|+++.++|+.. ...+..+.+.+|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999999999999999999999965 22367778888874
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=83.22 E-value=0.055 Score=52.94 Aligned_cols=40 Identities=10% Similarity=0.027 Sum_probs=32.8
Q ss_pred CCCCChHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHhCC
Q 003313 469 PPRHDSSDTIHRALKL-GVCVKMITGDHLAIAKETGRRLGI 508 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~-Gi~v~m~TGD~~~~a~~ia~~~gi 508 (831)
++.|++.+.++.|++. |+++.++|+-....+....+.+|+
T Consensus 75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l 115 (197)
T 1q92_A 75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAW 115 (197)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHH
T ss_pred CcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhch
Confidence 5789999999999999 999999999876655555555554
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=82.50 E-value=0.82 Score=46.59 Aligned_cols=93 Identities=16% Similarity=0.057 Sum_probs=59.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh--C---------CCCCCCCCccccCCcCCCCCcccHHHHHHh
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRL--G---------IGTNMYPSSLLLGRDKDENEALPVDELIEK 537 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~--g---------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (831)
++.|++.+++++ |+++.++|..+...+..+-+.+ | +.. .+ + .-++....
T Consensus 125 ~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~------~~-----~----~~f~~~~~- 184 (253)
T 2g80_A 125 PVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNS------YI-----D----GYFDINTS- 184 (253)
T ss_dssp CCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGG------GC-----C----EEECHHHH-
T ss_pred CCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHh------hc-----c----eEEeeecc-
Confidence 567888888877 9999999999988877776665 4 210 00 0 00000000
Q ss_pred cCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEE
Q 003313 538 ADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA 584 (831)
Q Consensus 538 ~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa 584 (831)
-..-.|+-=....+.+.-..+.++|+||..+|+.+-++|++-..
T Consensus 185 ---g~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i 228 (253)
T 2g80_A 185 ---GKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATG 228 (253)
T ss_dssp ---CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred ---CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEE
Confidence 01112333344555555555679999999999999999997643
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=80.82 E-value=1 Score=45.70 Aligned_cols=51 Identities=22% Similarity=0.165 Sum_probs=33.7
Q ss_pred HHHHHHhhcCCEEEEEcCC-ccChhhhccCCeeE-Ee--cCchH-HHhh---hcCEEEe
Q 003313 551 EIVKILQEKKHVVGMTGDG-VNDAPALKKADIGI-AV--AGATE-AARG---AADIVLT 601 (831)
Q Consensus 551 ~iv~~l~~~g~~v~~iGDG-~ND~~al~~AdvgI-a~--~~~~~-~a~~---aadivl~ 601 (831)
.+.+.+.-..+.++||||+ .||+.+.++|++.. .+ |.+.. ..++ .+|+++.
T Consensus 191 ~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~ 249 (264)
T 1yv9_A 191 RAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVD 249 (264)
T ss_dssp HHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEES
T ss_pred HHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEe
Confidence 3444444445679999999 69999999999873 33 43322 2222 5898873
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=80.78 E-value=0.88 Score=44.41 Aligned_cols=91 Identities=13% Similarity=0.051 Sum_probs=62.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
.+||++.+.+++|++. +++++.|.-....|..+.+.+++... .. ..+.+++. ...
T Consensus 68 ~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~-f~-~~l~rd~~----------------------~~~ 122 (195)
T 2hhl_A 68 LKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGV-FR-ARLFRESC----------------------VFH 122 (195)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSC-EE-EEECGGGC----------------------EEE
T ss_pred EeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCccc-EE-EEEEcccc----------------------eec
Confidence 5799999999999998 99999999999999999999998531 11 11111100 001
Q ss_pred HHHHHHHHhh---cCCEEEEEcCCccChhhhccCCeeEE
Q 003313 549 KYEIVKILQE---KKHVVGMTGDGVNDAPALKKADIGIA 584 (831)
Q Consensus 549 K~~iv~~l~~---~g~~v~~iGDG~ND~~al~~AdvgIa 584 (831)
|...++.++. .-..|.+++|..++..+=+.|++-|.
T Consensus 123 k~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~ 161 (195)
T 2hhl_A 123 RGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQ 161 (195)
T ss_dssp TTEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECC
T ss_pred CCceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEe
Confidence 2222333333 23569999999999988777755553
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=80.25 E-value=1.1 Score=43.11 Aligned_cols=90 Identities=13% Similarity=0.053 Sum_probs=61.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
.+||++.+.++++++. +++++.|.-....|..+.+.++... ... ..+..++. ...
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~-~f~-~~~~rd~~----------------------~~~ 109 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWG-AFR-ARLFRESC----------------------VFH 109 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTC-CEE-EEECGGGS----------------------EEE
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCC-cEE-EEEeccCc----------------------eec
Confidence 5799999999999998 9999999999999999999999753 111 11111100 001
Q ss_pred HHHHHHHHhh---cCCEEEEEcCCccChhhhccCCeeE
Q 003313 549 KYEIVKILQE---KKHVVGMTGDGVNDAPALKKADIGI 583 (831)
Q Consensus 549 K~~iv~~l~~---~g~~v~~iGDG~ND~~al~~AdvgI 583 (831)
|...++.++. .-..|.++||..+|..+=..+++-|
T Consensus 110 k~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 110 RGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp TTEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred CCcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 1122233333 2356999999999998877676655
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 831 | ||||
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 2e-28 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 4e-28 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 4e-21 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 2e-18 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 8e-14 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 4e-11 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 3e-10 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 1e-09 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 4e-07 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 1e-06 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 4e-06 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 1e-05 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 2e-05 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 9e-05 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 3e-04 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 3e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 4e-04 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 0.001 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 0.002 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 0.003 |
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 116 bits (290), Expect = 2e-28
Identities = 39/361 (10%), Positives = 92/361 (25%), Gaps = 38/361 (10%)
Query: 276 VTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLNRLTV-----DRNLIEVF 330
V L+ + + + + + + + D+ L ++
Sbjct: 11 VFLSEERCFDVSALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLK 70
Query: 331 NRDMDKDI-------LVLLAARASRLENQD--AIDAAIINMLADPKEARANINEVHFLPF 381
+ ++ + + L +L + + A + + N+ + L
Sbjct: 71 SLGLNSNWDMLFIVFSIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNE 130
Query: 382 NPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLAV 441
+ + + A ++ + G + LA++ + +
Sbjct: 131 QLPLQFLDNVKVGKNNIYAALEEFATTELHVSDATLFSLKGA----LWTLAQEVYQEWYL 186
Query: 442 AVQEVPEMTEDSPGGPRSFCGLLPLFDP--PRHDSSDTIHRALKLGVCVKMITGDHLAIA 499
+ ++ E G + P + ++ G + + TG
Sbjct: 187 GSKLYEDV-EKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTET 245
Query: 500 KETGRRLGIGTNMYPSSLLLGRDKDENEAL---------PVDELIEKADGFTDVFAEHKY 550
LG+ + D E E + P A + Y
Sbjct: 246 VVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESY 305
Query: 551 EIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVA-------GATEAARGAADIVLTE 602
+ K V + GD + D + +K I A E AD V+
Sbjct: 306 INKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINH 365
Query: 603 P 603
Sbjct: 366 L 366
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 109 bits (272), Expect = 4e-28
Identities = 58/157 (36%), Positives = 79/157 (50%), Gaps = 2/157 (1%)
Query: 458 RSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTN--MYPS 515
++ DPPR + +I G+ V MITGD+ A RR+GI
Sbjct: 9 KTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVAD 68
Query: 516 SLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPA 575
GR+ D+ E +A F V HK +IV+ LQ + MTGDGVNDAPA
Sbjct: 69 RAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPA 128
Query: 576 LKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAV 612
LKKA+IGIA+ T A+ A+++VL + S I +AV
Sbjct: 129 LKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAV 165
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 95.1 bits (236), Expect = 4e-21
Identities = 48/300 (16%), Positives = 101/300 (33%), Gaps = 68/300 (22%)
Query: 25 LPLDEVFGQLGTTR-QGLSSEDAEVRLKFFGSNKL-EKKPENKFLKFLSFMWNPLSWVME 82
+E G + GL+ + + L+ +G N+L ++ ++ + + + L ++
Sbjct: 7 KSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILL 66
Query: 83 TAALMAIAL---ANGGGQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPK 139
AA ++ L G + + I+ +LI N+ + +E NAENA AL +
Sbjct: 67 LAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA 126
Query: 140 TKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADARLLEGDPLKIDQSELTGESLTVTKE 199
T+ D P +L E GE L+
Sbjct: 127 TE-------------------------QDKTPLQQKLDE-----------FGEQLSK--- 147
Query: 200 TGDEVFSGLTCKHVHSFFGKAADLVDSTEVVGHF-QQVLTSIGNFCICFITVGMILEIIV 258
V S + G D V + ++ + V I E +
Sbjct: 148 ----VISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVA------LAVAAIPEGLP 197
Query: 259 MFPIQHRLYRDRINMLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKTAALTLN 318
+++ LA+ + R++++ AI + + ++E + R + ++
Sbjct: 198 A-------------VITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLIS 244
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 79.8 bits (196), Expect = 2e-18
Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 30/155 (19%)
Query: 458 RSFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSL 517
++ D + + + ++G+ V MITGD+ A+ R L + +
Sbjct: 10 KTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL- 68
Query: 518 LLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALK 577
K E VK LQ K VV GDG+NDAPAL
Sbjct: 69 ----------------------------PHQKSEEVKKLQ-AKEVVAFVGDGINDAPALA 99
Query: 578 KADIGIAVAGATEAARGAADIVLTEPGLSVICSAV 612
+AD+GIAV ++ A + DIVL L + +A+
Sbjct: 100 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 69.1 bits (168), Expect = 8e-14
Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 27/148 (18%)
Query: 353 DAIDAAIINMLA----DPKEARANINEVHFLPFNPVDKRTAITYTD--SEGNWYRASKGA 406
DA ++A++ + ++ R +V + FN +K + + + KGA
Sbjct: 66 DASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGA 125
Query: 407 PEQILNMCQEKEEIGGKV----------HEIINKLAEKGLRSLAVAVQEVP--------E 448
PE+IL+ C G ++ +L G R L +P +
Sbjct: 126 PERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK 185
Query: 449 MTEDSPGGPRS---FCGLLPLFDPPRHD 473
D P F GL+ + D H
Sbjct: 186 FDTDELNFPTEKLCFVGLMSMIDHHHHH 213
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 58.6 bits (141), Expect = 4e-11
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 141 KVLRDGQWKEQ--DAAVLVPGDIISIKFGDVIPADARLLEGDP--LKIDQSELTGESLTV 196
KV R + Q A +VPGDI+ + GD +PAD R+L L++DQS LTGES++V
Sbjct: 4 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 63
Query: 197 TKETGDEVFSGLTCKHVHSFF 217
K T + +
Sbjct: 64 IKHTEPVPDPRAVNQDKKNML 84
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 58.8 bits (141), Expect = 3e-10
Identities = 26/207 (12%), Positives = 57/207 (27%), Gaps = 7/207 (3%)
Query: 418 EEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDT 477
+ + S+ V + + S + R +
Sbjct: 26 KTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSL--KEEITSFVLEDAKIREGFREF 83
Query: 478 IHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEK 537
+ + + +I+G + +Y + +N+ + +D
Sbjct: 84 VAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASF-----DNDYIHIDWPHSC 138
Query: 538 ADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAAD 597
++ K ++ L E + M GD V D A K +D+ A R
Sbjct: 139 KGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNL 198
Query: 598 IVLTEPGLSVICSAVLTSRTVFQIMKN 624
L I + + V + ++N
Sbjct: 199 NHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 57.2 bits (137), Expect = 1e-09
Identities = 27/177 (15%), Positives = 60/177 (33%), Gaps = 23/177 (12%)
Query: 293 KRMTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLENQ 352
+ + E+A + LC+ ++L N + + + + L L + + +
Sbjct: 45 GQFDGLVELATICALCN--DSSLDFN----ETKGVYEKVGEATETALTTLVEKMNVFNTE 98
Query: 353 DAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTDSEGN-----WYRASKGAP 407
+ + A R + + L F+ K ++ + ++ + KGAP
Sbjct: 99 VRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAP 158
Query: 408 EQILNMCQEKEEIGGKV------------HEIINKLAEKGLRSLAVAVQEVPEMTED 452
E +++ C +V LR LA+A ++ P E+
Sbjct: 159 EGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREE 215
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.5 bits (117), Expect = 4e-07
Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 12/147 (8%)
Query: 460 FCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLL 519
+ + + R + V V +I+G +I + +L I ++ L
Sbjct: 73 QRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRL- 131
Query: 520 GRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVG--MTGDGVNDAPALK 577
+ E + + K +++K+L+EK H M GDG D A
Sbjct: 132 -------KFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACP 184
Query: 578 KADIGIAVAG--ATEAARGAADIVLTE 602
AD I G + + A +T+
Sbjct: 185 PADAFIGFGGNVIRQQVKDNAKWYITD 211
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 47.0 bits (111), Expect = 1e-06
Identities = 15/58 (25%), Positives = 21/58 (36%)
Query: 547 EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPG 604
++++K GD D PA AVA A + A D VL+ G
Sbjct: 83 TACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHG 140
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 46.5 bits (109), Expect = 4e-06
Identities = 33/215 (15%), Positives = 61/215 (28%), Gaps = 30/215 (13%)
Query: 416 EKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDP------ 469
I K E I +KGL V ++ + + L + P
Sbjct: 17 RDRLISTKAIESIRSAEKKGLT--------VSLLSGNVIPVVYALKIFLGINGPVFGENG 68
Query: 470 -PRHDSSDTIHRALKLGVCVKMIT-----GDHLAIAKETGRRLGIGTNMYPSSLLLGRDK 523
D+ +I + K + +I R G ++ P + D
Sbjct: 69 GIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDV----DY 124
Query: 524 DENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHV------VGMTGDGVNDAPALK 577
EA +I + + + + + + K+ + + GD ND P +
Sbjct: 125 VRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQ 184
Query: 578 KADIGIAVAGATEAARGAADIVLTEPGLSVICSAV 612
A AT+ + +D V I
Sbjct: 185 LPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIF 219
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 45.4 bits (106), Expect = 1e-05
Identities = 16/50 (32%), Positives = 21/50 (42%)
Query: 563 VGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAV 612
V GDG ND A K +AVA A + + AD V + A+
Sbjct: 171 VAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAI 220
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 44.5 bits (104), Expect = 2e-05
Identities = 29/180 (16%), Positives = 50/180 (27%), Gaps = 7/180 (3%)
Query: 424 VHEIINKLA-EKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRAL 482
V EI A + G+ +L +++P+ + +L D + I
Sbjct: 14 VPEIWIAFAEKTGIDALKATTRDIPDYDV----LMKQRLRILDEHGLKLGDIQEVIATLK 69
Query: 483 KLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFT 542
L V+ + + P LG L +D+ +
Sbjct: 70 PLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVG-YQ 127
Query: 543 DVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTE 602
+ K + V + + V GD ND L +A GI R
Sbjct: 128 LRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH 187
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 43.1 bits (100), Expect = 9e-05
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 563 VGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPG 604
V + GD ND L AVA AT++A+ A VL
Sbjct: 226 VLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSH 267
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 40.6 bits (93), Expect = 3e-04
Identities = 38/194 (19%), Positives = 68/194 (35%), Gaps = 16/194 (8%)
Query: 425 HEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRHDSSDTIHRALKL 484
+E I+++A + A +EV ++T+++ G +F L D
Sbjct: 18 NETIDEIARE-----AGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVEKAIK 72
Query: 485 GVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDV 544
+ + + K G + + + + ++ ++K + + LI K T
Sbjct: 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGD 132
Query: 545 F----------AEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARG 594
E +I KI GDG ND KKA + IA A +
Sbjct: 133 VEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKE 191
Query: 595 AADIVLTEPGLSVI 608
ADI + + L I
Sbjct: 192 KADICIEKRDLREI 205
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 41.1 bits (95), Expect = 3e-04
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 546 AEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIV 599
+ +L K + GD ND ++ A +G+AV A + + A+ V
Sbjct: 199 GTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFV 252
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 40.7 bits (94), Expect = 4e-04
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 567 GDGVNDAPALKKADIGIAVAGATEAARGAADIV 599
GD +ND L+ A G+A+ A E + AD V
Sbjct: 236 GDSLNDKSMLEAAGKGVAMGNAREDIKSIADAV 268
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 39.5 bits (91), Expect = 0.001
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 522 DKDENEALPVDELIEKADGFTDVFAE--HKYEIVKILQEKKHV----VGMTGDGVNDAPA 575
+K+ ++P E+ F DV A+ K + + + + GDG ND
Sbjct: 158 EKEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISM 217
Query: 576 LKKADIGIAVAGATEAARGAADIV 599
L+ A IG+A+ A E + AAD V
Sbjct: 218 LRHAAIGVAMGQAKEDVKAAADYV 241
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 38.4 bits (88), Expect = 0.002
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIV 599
++ ++ +K+ +V GD ND ++A + +A+ A E + A+DIV
Sbjct: 196 RFLRERMNWKKEEIVVF-GDNENDLFMFEEAGLRVAMENAIEKVKEASDIV 245
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 38.0 bits (87), Expect = 0.003
Identities = 12/38 (31%), Positives = 15/38 (39%)
Query: 567 GDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPG 604
GD NDA LK A A+ A E + A +
Sbjct: 213 GDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNN 250
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 831 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 100.0 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.96 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.91 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.81 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.8 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.51 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.26 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.21 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.15 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.12 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.12 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.02 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.0 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.98 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.95 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.93 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.86 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.85 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.83 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.63 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.6 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.48 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 98.45 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.82 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.74 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.64 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.56 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.51 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.43 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.25 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 97.13 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.84 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.81 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.67 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.47 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.46 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 96.37 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.33 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.23 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 96.07 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.57 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.5 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 95.12 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 95.11 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 94.6 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 94.25 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 93.5 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 93.43 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 93.41 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 93.23 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 91.77 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 90.85 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 90.38 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 88.21 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 86.61 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=3.6e-33 Score=316.30 Aligned_cols=229 Identities=19% Similarity=0.230 Sum_probs=172.6
Q ss_pred ccccCCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCccCCCC-CcHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC---
Q 003313 21 DLARLPLDEVFGQLGTT-RQGLSSEDAEVRLKFFGSNKLEKKP-ENKFLKFLSFMWNPLSWVMETAALMAIALANGG--- 95 (831)
Q Consensus 21 ~~~~~~~~~~~~~l~~~-~~GLs~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~l~i~ail~~~~~~~~--- 95 (831)
|+|..++||++++|++| ++|||++|+++|+++||+|+++.++ .+.|+.++++|++|+.++|+++++++++++...
T Consensus 3 ~~h~~~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~ 82 (472)
T d1wpga4 3 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 82 (472)
T ss_dssp TGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTT
T ss_pred ChhhCCHHHHHHHhCcCcccCcCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhccc
Confidence 68999999999999999 6899999999999999999998865 778899999999999999999999999987422
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEeCCCcCCCcEEEEcCCCccccceE
Q 003313 96 GQGPDWQDSVGIVCLLIINSSISFIEESNAENATAALMAHLTPKTKVLRDGQWKEQDAAVLVPGDIISIKFGDVIPADAR 175 (831)
Q Consensus 96 ~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~V~rdg~~~~i~~~~lv~GDiI~l~~G~~iPaDg~ 175 (831)
.....|.++++|++++++++.++++||+|++++++++++..++. ..||++|+|.+
T Consensus 83 ~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~-------------------------~~~~~~P~d~~ 137 (472)
T d1wpga4 83 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA-------------------------TEQDKTPLQQK 137 (472)
T ss_dssp STTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC-------------------------CCCCCCHHHHH
T ss_pred ccchhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc-------------------------ccccCchHHHH
Confidence 22347999999999999999999999999999999998876654 35889999988
Q ss_pred EEecCCeEEEcccccCCCccccccCCCeeeecceeeeccchhhhHHHhhhccC-ccCcHHHHHHHHHHHHHHHHHHHHHH
Q 003313 176 LLEGDPLKIDQSELTGESLTVTKETGDEVFSGLTCKHVHSFFGKAADLVDSTE-VVGHFQQVLTSIGNFCICFITVGMIL 254 (831)
Q Consensus 176 ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~aGt~v~~~~t~~g~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~ 254 (831)
+.+ +||+.+.... ........+.+|++...+.... ..+.++.. ... +.+++
T Consensus 138 l~~-----------~g~~i~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~a--i~l~V 189 (472)
T d1wpga4 138 LDE-----------FGEQLSKVIS-------LICVAVWLINIGHFNDPVHGGSWIRGAIYYF--------KIA--VALAV 189 (472)
T ss_dssp HHH-----------HHHHHHHHHH-------HHHHHHHHHCCTTSSSCCSSSCSSSCGGGHH--------HHH--HHHHH
T ss_pred HHH-----------HHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH--------HHH--HHHHH
Confidence 754 3554432110 0001113455555554443332 12222211 111 11111
Q ss_pred HHHHHhhhchhhHhhHHH-HHHHHHHHHHHhhhcCceEEccchhhhhhcCceEEEecCC
Q 003313 255 EIIVMFPIQHRLYRDRIN-MLSVTLAIASYRLSQRGAITKRMTAIEEMARMDVLCSVKT 312 (831)
Q Consensus 255 ~~~~~~~~~~~~~~~~l~-~l~~~l~~~~~~l~~~~ilvk~~~~le~lg~v~~i~~DKT 312 (831)
...+++++ ++++++++|++||+|+|++||+++++|++|+..+.|+|||
T Consensus 190 ----------~~iPEgLp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~~~k~ 238 (472)
T d1wpga4 190 ----------AAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQF 238 (472)
T ss_dssp ----------HHSCTTHHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHHHHHH
T ss_pred ----------HhChhhHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHhHHh
Confidence 12456666 7889999999999999999999999999988888888887
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=2.8e-33 Score=270.05 Aligned_cols=148 Identities=39% Similarity=0.526 Sum_probs=138.0
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC--CCccccCCcCCCCCcccHHHHHHhcCcEEEeC
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY--PSSLLLGRDKDENEALPVDELIEKADGFTDVF 545 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 545 (831)
||+|++++++|+.||++||+++|+|||+..+|.++|+++||..+.. ....+.+.+++.....+..+..++..+|+|++
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 98 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 98 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence 9999999999999999999999999999999999999999975432 23345666777778888899999999999999
Q ss_pred hHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHh
Q 003313 546 AEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTS 615 (831)
Q Consensus 546 P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~g 615 (831)
|+||..+|+.+|++|++|+|+|||.||+|||++|||||+|++|+++|+++||+++++++|..|+++|+||
T Consensus 99 p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 99 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEeccccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.96 E-value=4.6e-29 Score=230.59 Aligned_cols=125 Identities=34% Similarity=0.474 Sum_probs=110.1
Q ss_pred eeeeeccccCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhc
Q 003313 459 SFCGLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKA 538 (831)
Q Consensus 459 ~~lG~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (831)
+..+.++++|++|++++++|+.|+++|++++|+|||+..+|.++|+++||..
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~---------------------------- 62 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------- 62 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE----------------------------
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh----------------------------
Confidence 4466789999999999999999999999999999999999999999999952
Q ss_pred CcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 539 DGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 539 ~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
++++++|++|..+++.+|+. ++|+|+|||.||+|||++|||||+|++++++++++||++++++++++|+.+|+
T Consensus 63 -v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 63 -VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp -EECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred -hccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecCccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 79999999999999999875 59999999999999999999999999999999999999999999999998874
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.91 E-value=1.5e-28 Score=270.39 Aligned_cols=311 Identities=10% Similarity=-0.032 Sum_probs=209.0
Q ss_pred chhhhhhcCceEEEecCCCccccCceEEEEEeeee-----cCCCCChH-HHHHHHHHhc----cccCCChHHHHHHHHhC
Q 003313 295 MTAIEEMARMDVLCSVKTAALTLNRLTVDRNLIEV-----FNRDMDKD-ILVLLAARAS----RLENQDAIDAAIINMLA 364 (831)
Q Consensus 295 ~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~-----~~~~~~~~-~~l~~a~~~~----~~~~~~~~~~ai~~~~~ 364 (831)
..+.|+||..+++|+|||||+|.|+|.+..+..+. ...+.+.+ ++....+++. ....+++...+++....
T Consensus 30 l~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (380)
T d1qyia_ 30 LMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIEAFMYQDE 109 (380)
T ss_dssp HHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHCSS
T ss_pred hhchhhcccceeeecCcccchhhhhheeeeecchhhhHhhhhcCCChhHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHh
Confidence 45679999999999999999999999875422100 00112222 2222221111 11223555666655443
Q ss_pred ChH----HHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhhccCchhhHHHHHHHHHHHHhccCeeee
Q 003313 365 DPK----EARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNMCQEKEEIGGKVHEIINKLAEKGLRSLA 440 (831)
Q Consensus 365 ~~~----~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~ 440 (831)
... ..+..+.....+||++.+++|++.....++.+..+.+|+++.+.- .+....++...+..++++|+|+++
T Consensus 110 ~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~~----~~~~~~~~~~~~~~~a~~~~r~l~ 185 (380)
T d1qyia_ 110 PVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHV----SDATLFSLKGALWTLAQEVYQEWY 185 (380)
T ss_dssp CHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTTC----SCCGGGSTTCHHHHHHHHHHHHHH
T ss_pred hccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcCC----cHHHHHHHHhHHHHHHHHHHHHHH
Confidence 222 234566777789999999999865443333334455666665422 222344556677889999999999
Q ss_pred eeeecCCCCCCCCCCCCceeeeeccccCCCCC--ChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccc
Q 003313 441 VAVQEVPEMTEDSPGGPRSFCGLLPLFDPPRH--DSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLL 518 (831)
Q Consensus 441 ~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~--~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~ 518 (831)
+|++..+..+. ....+....|++..+|++|| ++++++++|+++|++++|+|||+..+|..+++++||........++
T Consensus 186 ~~~~~~~~~~~-~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~ 264 (380)
T d1qyia_ 186 LGSKLYEDVEK-KIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIA 264 (380)
T ss_dssp HHHHHHHHHHC-SCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEE
T ss_pred Hhhhccccccc-ccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEE
Confidence 99886543221 11223356799999999766 9999999999999999999999999999999999996422111122
Q ss_pred cCCcC--------C-CCCcccHHHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCC---eeEEec
Q 003313 519 LGRDK--------D-ENEALPVDELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKAD---IGIAVA 586 (831)
Q Consensus 519 ~~~~~--------~-~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Ad---vgIa~~ 586 (831)
.+.+. + .....+-...+.....+++.+|++|..+++.++..++.|+|+|||.||++|+|+|| |||+||
T Consensus 265 ~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G 344 (380)
T d1qyia_ 265 TASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTG 344 (380)
T ss_dssp CHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCB
T ss_pred ecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecC
Confidence 11110 0 00001111222333458899999999999999999999999999999999999999 999999
Q ss_pred -CchHHHhh----hcCEEEeCCChhHHHHHH
Q 003313 587 -GATEAARG----AADIVLTEPGLSVICSAV 612 (831)
Q Consensus 587 -~~~~~a~~----aadivl~~~~~~~i~~~i 612 (831)
.|++..++ .||+++ +++..+.+++
T Consensus 345 ~~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 345 LKGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp TTBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred CCCcccHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 67765544 799999 6677776654
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.81 E-value=1.4e-20 Score=167.25 Aligned_cols=85 Identities=41% Similarity=0.607 Sum_probs=74.5
Q ss_pred eEEEEECCEE--EEEeCCCcCCCcEEEEcCCCccccceEEEe--cCCeEEEcccccCCCccccccC-------------C
Q 003313 139 KTKVLRDGQW--KEQDAAVLVPGDIISIKFGDVIPADARLLE--GDPLKIDQSELTGESLTVTKET-------------G 201 (831)
Q Consensus 139 ~~~V~rdg~~--~~i~~~~lv~GDiI~l~~G~~iPaDg~ll~--g~~~~Vdes~LTGEs~pv~K~~-------------g 201 (831)
.++|+|+|++ ++|++++|||||+|.|++||+|||||+|++ +.++.||||+|||||.|+.|.+ .
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 5799999985 789999999999999999999999999986 3358999999999999999975 3
Q ss_pred Ceeeecceeee-----------ccchhhhHHHh
Q 003313 202 DEVFSGLTCKH-----------VHSFFGKAADL 223 (831)
Q Consensus 202 ~~v~aGt~v~~-----------~~t~~g~~~~~ 223 (831)
+.+|+||.+.+ .+|.+|++.++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~ 114 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQ 114 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHh
Confidence 56999999887 67788887764
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.80 E-value=2.8e-19 Score=179.54 Aligned_cols=123 Identities=23% Similarity=0.353 Sum_probs=99.5
Q ss_pred CCChHHHHHHHHhC----ChHHHhhccceeEEecCCCCCceEEEEEEcC--CCcEEEEEccchHHHhhhccC--------
Q 003313 351 NQDAIDAAIINMLA----DPKEARANINEVHFLPFNPVDKRTAITYTDS--EGNWYRASKGAPEQILNMCQE-------- 416 (831)
Q Consensus 351 ~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~--~g~~~~~~kGa~e~i~~~~~~-------- 416 (831)
.++|.|.|++.++. +....+..++++..+||+|.+|+|+++++.. ++++++|+|||||.|+++|+.
T Consensus 64 ~GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~ 143 (214)
T d1q3ia_ 64 AGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEI 143 (214)
T ss_dssp CSCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEE
T ss_pred ccChHHHHHHHHHHHhCCCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCcee
Confidence 36999999998763 5556788899999999999999999999864 456788999999999999973
Q ss_pred --chhhHHHHHHHHHHHHhccCeeeeeeeecCCCCC-----------CCCCCCCceeeeeccccCCCCCC
Q 003313 417 --KEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMT-----------EDSPGGPRSFCGLLPLFDPPRHD 473 (831)
Q Consensus 417 --~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~-----------~~~~e~~l~~lG~i~~~D~lr~~ 473 (831)
+++.++.+.+.+++|+++|+|||++||+.++..+ .+..|++|+|+|+++++||||++
T Consensus 144 ~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 144 PLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp ECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred echHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 4567888999999999999999999999986542 24457899999999999999985
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.51 E-value=5.8e-15 Score=150.30 Aligned_cols=152 Identities=17% Similarity=0.224 Sum_probs=107.4
Q ss_pred ecCCCccccCceEEEEEeeeecCCCCChHHHHHHHHHhcccc------------CCChHHHHHHHHhCC-----------
Q 003313 309 SVKTAALTLNRLTVDRNLIEVFNRDMDKDILVLLAARASRLE------------NQDAIDAAIINMLAD----------- 365 (831)
Q Consensus 309 ~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~a~~~~~~~------------~~~~~~~ai~~~~~~----------- 365 (831)
++..|+++.++-.+. .........++..+++|+... .++|.|.|++.++..
T Consensus 29 y~p~G~i~~~~~~v~------~~~~~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE~ALl~~a~k~g~~~~~~~~~ 102 (239)
T d1wpga3 29 YAPEGEVLKNDKPIR------SGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNL 102 (239)
T ss_dssp SSSCCCEEETTEECC------GGGCHHHHHHHHHHHHSCSCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCSSS
T ss_pred eCCceEEEECCcCcC------ccccHHHHHHHHHHHhcCCCEeeecCCCCeEEEcCCCCcHHHHHHHHHhCCChHHhhcc
Confidence 356677776654331 111112234555555554321 258899998877521
Q ss_pred ---------hHHHhhccceeEEecCCCCCceEEEEEEcCCC-----cEEEEEccchHHHhhhccC----------chhhH
Q 003313 366 ---------PKEARANINEVHFLPFNPVDKRTAITYTDSEG-----NWYRASKGAPEQILNMCQE----------KEEIG 421 (831)
Q Consensus 366 ---------~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g-----~~~~~~kGa~e~i~~~~~~----------~~~~~ 421 (831)
....+..++++..+||+|.||||+++++.+++ .+.+|+|||||.|+++|+. +++.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~ 182 (239)
T d1wpga3 103 SKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVK 182 (239)
T ss_dssp CHHHHTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHH
T ss_pred chhhhhccchhhhhhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHH
Confidence 01135678899999999999999999986554 3578999999999999973 34567
Q ss_pred HHHHHHHHHH--HhccCeeeeeeeecCCCCCC----------CCCCCCceeeeeccc
Q 003313 422 GKVHEIINKL--AEKGLRSLAVAVQEVPEMTE----------DSPGGPRSFCGLLPL 466 (831)
Q Consensus 422 ~~~~~~~~~~--~~~G~r~l~~a~~~~~~~~~----------~~~e~~l~~lG~i~~ 466 (831)
+.+.+.++.+ +++|+|||++|||+++..+. +++|++|+|+|++++
T Consensus 183 ~~~~~~~~~~~~a~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 183 EKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp HHHHHHHHHHTTSSCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred HHHHHHHHHHhHhhCCCEEEEEEEEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 7777777776 67999999999999875432 246889999999985
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.26 E-value=1.1e-11 Score=124.24 Aligned_cols=147 Identities=22% Similarity=0.221 Sum_probs=105.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCC--Cccc--------------------------cC
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYP--SSLL--------------------------LG 520 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~--~~~~--------------------------~~ 520 (831)
.+.+.+.++|++|+++|++++++||++...+...++.+++...... ...+ .+
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 4678899999999999999999999999999999999988642110 0000 00
Q ss_pred Cc---------------CCCCCcccHHHHHHhcC---------cEEEeCh--HHHHHHHHHHhh----cCCEEEEEcCCc
Q 003313 521 RD---------------KDENEALPVDELIEKAD---------GFTDVFA--EHKYEIVKILQE----KKHVVGMTGDGV 570 (831)
Q Consensus 521 ~~---------------~~~~~~~~~~~~~~~~~---------v~~~~~P--~~K~~iv~~l~~----~g~~v~~iGDG~ 570 (831)
.. .+....+.+.++.++.. .+..+.| ..|...++.+.+ ..+.|+++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 00 00001122333333321 1223333 357777766654 346799999999
Q ss_pred cChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHHh
Q 003313 571 NDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLTS 615 (831)
Q Consensus 571 ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~g 615 (831)
||.+|++.|++||||+++++.+|++||+|+..++.+++.+++++.
T Consensus 179 NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEECCCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 999999999999999999999999999999999999999888754
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.21 E-value=3.4e-11 Score=120.73 Aligned_cols=146 Identities=19% Similarity=0.197 Sum_probs=104.5
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCC--CccccCCcC---C------------------
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYP--SSLLLGRDK---D------------------ 524 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~--~~~~~~~~~---~------------------ 524 (831)
.++.+++.+++++|++.|++++++||++...+..+++.+|+...... +..+...+. .
T Consensus 19 ~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (225)
T d1l6ra_ 19 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRT 98 (225)
T ss_dssp SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTS
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHhc
Confidence 45678999999999999999999999999999999999998653210 001100000 0
Q ss_pred -----------------CCCcccHHHHHH---hc-------CcEEEeCh--HHHHHHHHHHhhc----CCEEEEEcCCcc
Q 003313 525 -----------------ENEALPVDELIE---KA-------DGFTDVFA--EHKYEIVKILQEK----KHVVGMTGDGVN 571 (831)
Q Consensus 525 -----------------~~~~~~~~~~~~---~~-------~v~~~~~P--~~K~~iv~~l~~~----g~~v~~iGDG~N 571 (831)
....+..+.+.. .. .......| .+|...++.+.++ ...|+++|||.|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~n 178 (225)
T d1l6ra_ 99 SMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNN 178 (225)
T ss_dssp SCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred CcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCcc
Confidence 001111221111 11 11233334 3788888776553 345999999999
Q ss_pred ChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 572 DAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 572 D~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
|.+|++.|++||||++|.+.+++.||+|+..++..+|.++++
T Consensus 179 D~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~ 220 (225)
T d1l6ra_ 179 DMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 220 (225)
T ss_dssp GHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred hHHHHHHCCeEEEECCCcHHHHHhCCEEECCCCcCHHHHHHH
Confidence 999999999999999999999999999999999999999886
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.15 E-value=3.5e-11 Score=124.91 Aligned_cols=71 Identities=23% Similarity=0.277 Sum_probs=61.9
Q ss_pred EeChH--HHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 543 DVFAE--HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 543 ~~~P~--~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
.++|. +|..-++.+.+. .+.|+++|||.||.+||+.|+.||||++|++.+++.||+++.+++-+++.++++
T Consensus 206 di~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 206 ELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 45554 698888888663 346999999999999999999999999999999999999999888899988875
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.12 E-value=6.3e-11 Score=122.08 Aligned_cols=72 Identities=22% Similarity=0.247 Sum_probs=62.1
Q ss_pred EEeChH--HHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 542 TDVFAE--HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 542 ~~~~P~--~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
...+|. +|...++.+.++ ...++++|||.||.+||+.|+.|+||++|.+..|+.||+|+..++-.++.++++
T Consensus 189 ~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 189 LEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp EEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred EEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 345554 598888887763 346899999999999999999999999999999999999999888889998875
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.12 E-value=8.9e-11 Score=112.46 Aligned_cols=101 Identities=24% Similarity=0.195 Sum_probs=83.2
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHHHHHHHHH
Q 003313 476 DTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEHKYEIVKI 555 (831)
Q Consensus 476 ~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~K~~iv~~ 555 (831)
.+|+.|+..|+.+.++||+....+...++++++.. ++. ...+|...++.
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~-----------------------------~~~--~~~~K~~~l~~ 87 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL-----------------------------FFL--GKLEKETACFD 87 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE-----------------------------EEE--SCSCHHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc-----------------------------ccc--ccccHHHHHHH
Confidence 47999999999999999999999999999999842 122 22345554444
Q ss_pred Hhh----cCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhH
Q 003313 556 LQE----KKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSV 607 (831)
Q Consensus 556 l~~----~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~ 607 (831)
+.+ ..+.|+++||+.||.|||+.|++|+||++|.+.+|+.||+|+..+.=.+
T Consensus 88 ~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~G 143 (177)
T d1k1ea_ 88 LMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKG 143 (177)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTT
T ss_pred HHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCCc
Confidence 333 3578999999999999999999999999999999999999999877444
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.02 E-value=6.4e-11 Score=121.94 Aligned_cols=73 Identities=25% Similarity=0.257 Sum_probs=63.0
Q ss_pred EEEeChH--HHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 541 FTDVFAE--HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 541 ~~~~~P~--~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
+..++|. +|..-++.+.++ .+.|+++|||.||.+||+.|+.|+||++|++.+|+.||+|+.+++-+++.++|+
T Consensus 181 ~~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 181 FIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred eEEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 3456664 599888888663 346999999999999999999999999999999999999999989999988876
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.00 E-value=9.1e-11 Score=120.30 Aligned_cols=72 Identities=31% Similarity=0.311 Sum_probs=61.8
Q ss_pred EEeChH--HHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 542 TDVFAE--HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 542 ~~~~P~--~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
..+.|. .|..-++.+.++ ...++++|||.||.+||+.|+.||||+||++.+|+.||+|+.+++-+++.++|+
T Consensus 178 ~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~ 255 (260)
T d2rbka1 178 ADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMK 255 (260)
T ss_dssp CEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHH
Confidence 344553 588888777653 457999999999999999999999999999999999999999888999999885
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.98 E-value=2.9e-10 Score=113.22 Aligned_cols=125 Identities=21% Similarity=0.197 Sum_probs=91.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccc----cCCcCCCCCcccHHHHHHhcCcEEEe
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLL----LGRDKDENEALPVDELIEKADGFTDV 544 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~ 544 (831)
+++|++.+.|+.||++|++++++||.....+..+++.+|++....-...+ .|..... .......
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~------------~~~~p~~ 149 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGF------------DETQPTA 149 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEE------------CTTSGGG
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccc------------eeeeeee
Confidence 46899999999999999999999999999999999999996321000000 0000000 0000113
Q ss_pred ChHHHHHHHHHHhhc--CCEEEEEcCCccChhhhccCCeeEEec--CchHHHhhhcCEEEeCCChhH
Q 003313 545 FAEHKYEIVKILQEK--KHVVGMTGDGVNDAPALKKADIGIAVA--GATEAARGAADIVLTEPGLSV 607 (831)
Q Consensus 545 ~P~~K~~iv~~l~~~--g~~v~~iGDG~ND~~al~~AdvgIa~~--~~~~~a~~aadivl~~~~~~~ 607 (831)
.+..|.++++.++++ -..+.++|||.||.+|++.||++||++ ......++.||.++. +|..
T Consensus 150 ~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~--~f~e 214 (217)
T d1nnla_ 150 ESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVE 214 (217)
T ss_dssp STTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGG
T ss_pred ccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeC--CHHH
Confidence 456799999999764 346999999999999999999999997 345667788999984 4543
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.95 E-value=5.5e-10 Score=114.78 Aligned_cols=72 Identities=24% Similarity=0.315 Sum_probs=61.6
Q ss_pred EEeChH--HHHHHHHHHhhc----CCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 542 TDVFAE--HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 542 ~~~~P~--~K~~iv~~l~~~----g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
..++|. .|...++.+.++ ...|+++|||.||.+||+.|++||||++|++.+|+.||+|+.+++-.++.++|+
T Consensus 182 ~di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 182 LEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred eeecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 345564 588888777553 345889999999999999999999999999999999999999999999998875
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.93 E-value=5.2e-10 Score=111.73 Aligned_cols=147 Identities=14% Similarity=0.045 Sum_probs=105.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCcccc-CCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLL-GRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
+++|++.+.++.|++.|+++.++|+-....+..+.+++|+........... +..... ..........++..|+
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~------~~~~~~~~~~~~~k~~ 148 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHI------DWPHSCKGTCSNQCGC 148 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEE------ECTTCCCTTCCSCCSS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCccee------ccccccccccccCCHH
Confidence 478999999999999999999999999999999999998754221111110 000000 0000001234567888
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhh-cCEEEeCCChhHHHHHHHHhHHHHHHH
Q 003313 548 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGA-ADIVLTEPGLSVICSAVLTSRTVFQIM 622 (831)
Q Consensus 548 ~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~a-adivl~~~~~~~i~~~i~~gR~~~~~i 622 (831)
.|..+++.++..++.|+|+||+.||.+|+++||+++|++...+.+++. .+++. -++|+.|...+++-....+.+
T Consensus 149 ~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~-~~d~~~i~~~l~~~~~~~~~~ 223 (226)
T d2feaa1 149 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLP-YQDFYEIRKEIENVKEVQEWL 223 (226)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEEC-CSSHHHHHHHHHTSHHHHHHH
T ss_pred HHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeee-cCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999998655555444 44433 468999988887665555444
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.86 E-value=9e-10 Score=113.62 Aligned_cols=66 Identities=27% Similarity=0.311 Sum_probs=53.5
Q ss_pred HHHHHHHHHhh----cCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCC-hhHHHHHHH
Q 003313 548 HKYEIVKILQE----KKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPG-LSVICSAVL 613 (831)
Q Consensus 548 ~K~~iv~~l~~----~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~-~~~i~~~i~ 613 (831)
.|...++.+.+ ....|+++|||.||.+||+.|++|+||++|.+.+|+.||+|+..++ -.++.++++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 46666666554 3467999999999999999999999999999999999999997554 444666554
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.85 E-value=2e-09 Score=105.27 Aligned_cols=137 Identities=22% Similarity=0.199 Sum_probs=93.5
Q ss_pred cCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeCh
Q 003313 467 FDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFA 546 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P 546 (831)
..++.+++.+.++.++..|..+.++||.....+....++.++...... .+....... ..... .....+...+
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~-----~~~~~~~~~~ 144 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN--RLIVKDGKL-TGDVE-----GEVLKENAKG 144 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEETTEE-EEEEE-----CSSCSTTHHH
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhh--hhccccccc-ccccc-----cccccccccc
Confidence 346778999999999999999999999999999999999887531100 000000000 00000 0000000011
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHH
Q 003313 547 EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 547 ~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i 612 (831)
.-...+.+.++...+.++++|||.||.+|++.|++|||| ++.+..++.||+|+.++|+.+|.++|
T Consensus 145 ~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 145 EILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred chhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 222334444444556799999999999999999999999 88899999999999988998887654
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.83 E-value=5.1e-09 Score=102.06 Aligned_cols=130 Identities=16% Similarity=0.160 Sum_probs=93.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
+..++....++.+ +.+.+...+|+.............++.......-....... ........+..
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------------~~~~~~~~~~~ 133 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDR--------------VVGYQLRQKDP 133 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSC--------------EEEEECCSSSH
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecccc--------------cccccccchhh
Confidence 4556676777665 57899999999999999999999887532110000000000 01133445566
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSAVLT 614 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~i~~ 614 (831)
+...++.++...+.|+++|||.||.+||+.||+||||+.+.++.++++|+++. +++..+.+++..
T Consensus 134 ~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 134 KRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred HHHHHHHhcccccceEEecCCccCHHHHHhCCccEEECCCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 77888888888999999999999999999999999997777777788899876 567788876653
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.63 E-value=7.1e-08 Score=96.51 Aligned_cols=44 Identities=11% Similarity=0.046 Sum_probs=39.6
Q ss_pred cCCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 003313 467 FDPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGT 510 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~ 510 (831)
.+...+.+.++|++|+++|++++++||++...+..+.+++++..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 44556789999999999999999999999999999999999864
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.60 E-value=3.4e-08 Score=99.45 Aligned_cols=141 Identities=16% Similarity=0.155 Sum_probs=94.7
Q ss_pred ChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC----CCcccc-CCcCC-----------------------
Q 003313 473 DSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMY----PSSLLL-GRDKD----------------------- 524 (831)
Q Consensus 473 ~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~----~~~~~~-~~~~~----------------------- 524 (831)
+..+++.++++.|+.++++||++...+..+.+++++..+.. .+..+. ....+
T Consensus 22 ~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (244)
T d1s2oa1 22 EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGF 101 (244)
T ss_dssp HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhhc
Confidence 34455666788899999999999999999999999864310 001000 00000
Q ss_pred ----------------------CCCc---ccHHHHHHhcC----------cEEEeC--hHHHHHHHHHHhhc----CCEE
Q 003313 525 ----------------------ENEA---LPVDELIEKAD----------GFTDVF--AEHKYEIVKILQEK----KHVV 563 (831)
Q Consensus 525 ----------------------~~~~---~~~~~~~~~~~----------v~~~~~--P~~K~~iv~~l~~~----g~~v 563 (831)
.... +.+.+...+.. -...+. ..+|...++.+.+. ...|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~ 181 (244)
T d1s2oa1 102 EALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQT 181 (244)
T ss_dssp TTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGE
T ss_pred ccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhE
Confidence 0000 01111111110 122333 34698888888764 2458
Q ss_pred EEEcCCccChhhhccCCeeEEecCchHHHhhhcC-------EEEeCCChhHHHHHHH
Q 003313 564 GMTGDGVNDAPALKKADIGIAVAGATEAARGAAD-------IVLTEPGLSVICSAVL 613 (831)
Q Consensus 564 ~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aad-------ivl~~~~~~~i~~~i~ 613 (831)
+++|||.||.+||+.|+.|++|+|+.+.+++.|| ++...++..++.++++
T Consensus 182 v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~ 238 (244)
T d1s2oa1 182 LVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp EEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHH
Confidence 8999999999999999999999999999999888 6777777888888875
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.48 E-value=5e-07 Score=89.24 Aligned_cols=41 Identities=15% Similarity=0.063 Sum_probs=38.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIG 509 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~ 509 (831)
.+.+.+.+++++|+++|+.++++||++...+..+.+++|+.
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 46788999999999999999999999999999999999985
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=98.45 E-value=3.3e-07 Score=83.31 Aligned_cols=128 Identities=16% Similarity=0.224 Sum_probs=93.9
Q ss_pred EEEEeeeecCCCCChHHHHHHHHHhccccCCChHHHHHHHHhCChHH---HhhccceeEEecCCCCCceEEEEEEcCCCc
Q 003313 322 VDRNLIEVFNRDMDKDILVLLAARASRLENQDAIDAAIINMLADPKE---ARANINEVHFLPFNPVDKRTAITYTDSEGN 398 (831)
Q Consensus 322 v~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~---~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~ 398 (831)
++++. ...+.++++++.+|+.++..++ ||+.+||++++..... ...........||....+...+. .+|
T Consensus 4 ~td~i---p~~G~~~~ell~~AA~aE~~Se-HPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~g- 75 (136)
T d2a29a1 4 ASEFI---PAQGVDEKTLADAAQLASLADE-TPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGIN---IDN- 75 (136)
T ss_dssp EEEEE---ECTTCCHHHHHHHHHHHHHTCC-SHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEE---ETT-
T ss_pred cceEE---eCCCCCHHHHHHHHHHHhCCCC-chHHHHHHHHHHHhcCCCccccccccccccccccccceEEEE---ECC-
Confidence 55655 3578999999999999998776 9999999998753211 11233444556777666554433 256
Q ss_pred EEEEEccchHHHhhhccC-chhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccccCCCC
Q 003313 399 WYRASKGAPEQILNMCQE-KEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPLFDPPR 471 (831)
Q Consensus 399 ~~~~~kGa~e~i~~~~~~-~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr 471 (831)
..+.+|++..+.+.... ...++..+.+.++.++++|.++++++.++ +++|++++.|++|
T Consensus 76 -~~v~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~-------------~~~G~i~l~D~iK 135 (136)
T d2a29a1 76 -RMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIALKDIVK 135 (136)
T ss_dssp -EEEEEECHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETT-------------EEEEEEEEEESSC
T ss_pred -EEEEecHHHHHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEECC-------------EEEEEEEEEeecC
Confidence 46788999877654432 12346678888999999999999999877 8999999999997
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.82 E-value=6.1e-06 Score=80.88 Aligned_cols=66 Identities=11% Similarity=0.188 Sum_probs=46.9
Q ss_pred EEEeChH--HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCEEEeCCChhHHHHH
Q 003313 541 FTDVFAE--HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADIVLTEPGLSVICSA 611 (831)
Q Consensus 541 ~~~~~P~--~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadivl~~~~~~~i~~~ 611 (831)
+..+.|. +|...++.+.++. .++++||+.||.+||+.|+.|+||++|. ++.+|++.+.+ ...+.+.
T Consensus 150 ~idi~p~g~~Kg~al~~l~~~~-~~i~~GDs~ND~~Mf~~~~~~~av~~g~--~~~~A~~~~~~--~~ev~~~ 217 (229)
T d1u02a_ 150 IIELRVPGVNKGSAIRSVRGER-PAIIAGDDATDEAAFEANDDALTIKVGE--GETHAKFHVAD--YIEMRKI 217 (229)
T ss_dssp EEEEECTTCCHHHHHHHHHTTS-CEEEEESSHHHHHHHHTTTTSEEEEESS--SCCCCSEEESS--HHHHHHH
T ss_pred EEEEecCCCCHHHHHHHHhccc-cceeecCCCChHHHHhccCCeEEEEeCC--CCccCeEEcCC--HHHHHHH
Confidence 3445553 6999999998765 5678899999999999997776665433 24688999854 4444433
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.74 E-value=3e-06 Score=83.69 Aligned_cols=58 Identities=22% Similarity=0.386 Sum_probs=48.3
Q ss_pred EeChH--HHHHHHHHHhh-cCCEEEEEcC----CccChhhhccCC-eeEEecCchHHHhhhcCEEE
Q 003313 543 DVFAE--HKYEIVKILQE-KKHVVGMTGD----GVNDAPALKKAD-IGIAVAGATEAARGAADIVL 600 (831)
Q Consensus 543 ~~~P~--~K~~iv~~l~~-~g~~v~~iGD----G~ND~~al~~Ad-vgIa~~~~~~~a~~aadivl 600 (831)
.++|. .|...++.|.+ ..+.|+++|| |.||.+||++|+ .|+||+|+.|.+|..+|+++
T Consensus 178 ei~~~~vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~~ 243 (244)
T d2fuea1 178 DVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFF 243 (244)
T ss_dssp EEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred eecchhccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHHhcC
Confidence 44443 58888888866 4568999999 569999999997 79999999999999998875
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.64 E-value=3.6e-05 Score=75.59 Aligned_cols=124 Identities=14% Similarity=0.164 Sum_probs=81.2
Q ss_pred CCCChHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 470 PRHDSSDTIHRALKLG-VCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 470 lr~~~~~~I~~l~~~G-i~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
+-|++.+++++|++.| +++.++|+.....+..+.+..|+..-. + .++.+.+... . .-.|+.
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~f-d-~i~~~~~~~~--~--------------k~~p~~ 153 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-P-FGAFADDALD--R--------------NELPHI 153 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-S-CEECTTTCSS--G--------------GGHHHH
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccc-c-cccccccccc--c--------------cchhHH
Confidence 4589999999999987 899999999999999999999996421 1 1111111100 0 001111
Q ss_pred HHHHHHHHhh---cCCEEEEEcCCccChhhhccCCe---eEEecC--chHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 549 KYEIVKILQE---KKHVVGMTGDGVNDAPALKKADI---GIAVAG--ATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 549 K~~iv~~l~~---~g~~v~~iGDG~ND~~al~~Adv---gIa~~~--~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
-...++.+.. ..+.++||||+.+|..|-+.|++ +|+.|. ..+..+..||+++ ++++.+.+.+.
T Consensus 154 ~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 154 ALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred HHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE--CCHHHHHHHHH
Confidence 1223333322 23579999999999999999995 444453 2333445689998 56887777664
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.56 E-value=0.00012 Score=73.13 Aligned_cols=126 Identities=14% Similarity=0.116 Sum_probs=86.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.++++.|++.|+++.++||.+...+..+-+..|+..-. ...++.+.+.. ...-.|+.
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f-~d~~~~~d~~~----------------~~KP~p~~ 161 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK-PDFLVTPDDVP----------------AGRPYPWM 161 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-CSCCBCGGGSS----------------CCTTSSHH
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccc-ccccccccccc----------------ccccChHH
Confidence 57899999999999999999999999999999999999885321 11222221111 11223444
Q ss_pred HHHHHHHHhhc-CCEEEEEcCCccChhhhccCCee-EEecCchH---------------------------HHhhhcCEE
Q 003313 549 KYEIVKILQEK-KHVVGMTGDGVNDAPALKKADIG-IAVAGATE---------------------------AARGAADIV 599 (831)
Q Consensus 549 K~~iv~~l~~~-g~~v~~iGDG~ND~~al~~Advg-Ia~~~~~~---------------------------~a~~aadiv 599 (831)
=...++.+.-. .+.++||||..+|+.+-+.|++- |++..|.. ..+.-||++
T Consensus 162 ~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~v 241 (257)
T d1swva_ 162 CYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFT 241 (257)
T ss_dssp HHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCEE
Confidence 45555666543 46799999999999999999973 44433210 111238999
Q ss_pred EeCCChhHHHHHHH
Q 003313 600 LTEPGLSVICSAVL 613 (831)
Q Consensus 600 l~~~~~~~i~~~i~ 613 (831)
+ +++..+..+|+
T Consensus 242 i--~~l~eL~~ii~ 253 (257)
T d1swva_ 242 I--ETMQELESVME 253 (257)
T ss_dssp E--SSGGGHHHHHH
T ss_pred E--CCHHHHHHHHH
Confidence 9 66888887764
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.51 E-value=2.7e-05 Score=75.87 Aligned_cols=124 Identities=15% Similarity=0.111 Sum_probs=86.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
.+.|++.+.++.|++.|+++.++||.....+..+.+++|+.... ..++...+.. ...-.|+-
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f--~~~~~~~~~~----------------~~kp~p~~ 156 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF--SEMLGGQSLP----------------EIKPHPAP 156 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTTSS----------------SCTTSSHH
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhc--cccccccccc----------------cccccchh
Confidence 45799999999999999999999999999999999999985311 1111111110 11123444
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCe-eEEecC----chHHHhhhcCEEEeCCChhHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVAG----ATEAARGAADIVLTEPGLSVICSAV 612 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Adv-gIa~~~----~~~~a~~aadivl~~~~~~~i~~~i 612 (831)
-..+.+.++-....++|+||..+|..+-+.|++ .|.+.. ..+.....+|+++ +++..+++++
T Consensus 157 ~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v--~~l~dL~~ii 223 (224)
T d2hsza1 157 FYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKIT 223 (224)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGGT
T ss_pred hHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEE--CCHHHHHHhh
Confidence 455566666667789999999999999999987 444431 2234455689888 5677666543
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.43 E-value=0.00031 Score=71.26 Aligned_cols=131 Identities=12% Similarity=0.118 Sum_probs=80.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEE-----
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTD----- 543 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~----- 543 (831)
++|+|+++.++.|++.|+++.++||--......+++++|+..+.. +++ ...++-..+ .+...
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni--~I~-sN~l~f~~~----------~~~~~~~~~~ 201 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNV--KVV-SNFMDFDEN----------GVLKGFKGEL 201 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTE--EEE-EECEEECTT----------SBEEEECSSC
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCc--eEE-eeEEEEeCC----------eeEeeccCCc
Confidence 589999999999999999999999999999999999999864310 111 000000000 00000
Q ss_pred eChHHHHHHH----HHHhh--cCCEEEEEcCCccChhhhcc---CCeeEEec--Cc-----hHHHhhhcCEEEeCCChhH
Q 003313 544 VFAEHKYEIV----KILQE--KKHVVGMTGDGVNDAPALKK---ADIGIAVA--GA-----TEAARGAADIVLTEPGLSV 607 (831)
Q Consensus 544 ~~P~~K~~iv----~~l~~--~g~~v~~iGDG~ND~~al~~---AdvgIa~~--~~-----~~~a~~aadivl~~~~~~~ 607 (831)
.....|...+ ...+. ....|.++|||.||..|.+. ++.++++| +. -+.=+++-|+|+.+|.--.
T Consensus 202 i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~ 281 (291)
T d2bdua1 202 IHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLE 281 (291)
T ss_dssp CCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCH
T ss_pred cccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChh
Confidence 0111222111 22222 34578999999999999874 45666665 21 1223367899998876555
Q ss_pred HHHHH
Q 003313 608 ICSAV 612 (831)
Q Consensus 608 i~~~i 612 (831)
++..+
T Consensus 282 v~~~i 286 (291)
T d2bdua1 282 VVNSI 286 (291)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44433
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.25 E-value=0.00026 Score=68.51 Aligned_cols=119 Identities=13% Similarity=0.138 Sum_probs=81.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.++++.|++.|+++.++|+.....+..+.+..|+..- . ..++.+.+.. .+.-.|+-
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~-F-~~i~~~~~~~----------------~~Kp~~~~ 149 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDS-F-DALASAEKLP----------------YSKPHPQV 149 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG-C-SEEEECTTSS----------------CCTTSTHH
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccccc-c-cccccccccc----------------cchhhHHH
Confidence 3568999999999999999999999999999999999999531 1 1222221111 11223333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEE-ecC---chHHHhhhcCEEEeCCChhH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA-VAG---ATEAARGAADIVLTEPGLSV 607 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa-~~~---~~~~a~~aadivl~~~~~~~ 607 (831)
=...++.+.-..+.++|+||+.+|..|-+.|++... +.. ..+.....||.++ +++..
T Consensus 150 ~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i--~~l~e 210 (218)
T d1te2a_ 150 YLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKL--SSLTE 210 (218)
T ss_dssp HHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEEC--SCGGG
T ss_pred HHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEE--CChhh
Confidence 455666666667789999999999999999997543 321 2222334678887 44553
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.13 E-value=0.00065 Score=58.54 Aligned_cols=103 Identities=17% Similarity=0.194 Sum_probs=70.8
Q ss_pred CChHHHHHHHHHhccccCCChHHHHHHHHhCChHHHhhccceeEEecCCCCCceEEEEEEcCCCcEEEEEccchHHHhhh
Q 003313 334 MDKDILVLLAARASRLENQDAIDAAIINMLADPKEARANINEVHFLPFNPVDKRTAITYTDSEGNWYRASKGAPEQILNM 413 (831)
Q Consensus 334 ~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~~f~s~~k~~sv~v~~~~g~~~~~~kGa~e~i~~~ 413 (831)
.++++++.+++..+..++ ||+++|+++++.+...........+..|-. .+. |+ .+..|+++.+.+.
T Consensus 10 ~~e~elL~~aaslE~~S~-HPlA~AIv~~a~~~~~~~~~~~~~~~~~G~----Gi~-------g~--~v~vG~~~~~~~~ 75 (113)
T d2b8ea2 10 GDERELLRLAAIAERRSE-HPIAEAIVKKALEHGIELGEPEKVEVIAGE----GVV-------AD--GILVGNKRLMEDF 75 (113)
T ss_dssp SCHHHHHHHHHHHTTTCC-SHHHHHHHHHHHTTTCCCCCCSCEEEETTT----EEE-------ET--TEEEECHHHHHHT
T ss_pred CCHHHHHHHHHHHHCcCC-CchHHHHHHHHHHhcCCCCccccceeeccc----eEE-------eE--EEEECcHHHHHhc
Confidence 478899999999888777 999999999885432211122222222211 111 11 2456999997653
Q ss_pred ccCchhhHHHHHHHHHHHHhccCeeeeeeeecCCCCCCCCCCCCceeeeeccc
Q 003313 414 CQEKEEIGGKVHEIINKLAEKGLRSLAVAVQEVPEMTEDSPGGPRSFCGLLPL 466 (831)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~ 466 (831)
.- .+++.+.+.++.+..+|..+++++.++ .++|++++
T Consensus 76 ~~---~~~~~~~~~~~~~~~~G~T~v~va~d~-------------~~~G~ial 112 (113)
T d2b8ea2 76 GV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAV 112 (113)
T ss_dssp TC---CCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEE
T ss_pred CC---CCCHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEE
Confidence 22 345677888899999999999999987 89999876
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.84 E-value=0.00024 Score=68.24 Aligned_cols=120 Identities=11% Similarity=0.013 Sum_probs=82.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+.++.++..| ++.++|+.....+..+.+.+|+.... ..++.+.+ .....|+-
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f--d~v~~~~~------------------~~~~~p~~ 142 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF--DGIYGSSP------------------EAPHKADV 142 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECS------------------SCCSHHHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccc--cccccccc------------------cccccccc
Confidence 46789999999999775 88999999999999999999986321 11111111 11223444
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCe-eEEe--c--CchHHHhhhcCEEEeCCChhHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAV--A--GATEAARGAADIVLTEPGLSVICSA 611 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Adv-gIa~--~--~~~~~a~~aadivl~~~~~~~i~~~ 611 (831)
....++.++-..+.++||||+.||..|-++|++ .|++ | ...+.....+|+++ +++..+...
T Consensus 143 ~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi--~~l~el~~~ 208 (210)
T d2ah5a1 143 IHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLAY 208 (210)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHHH
T ss_pred cchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEE--CCHHHHHHH
Confidence 445555555556789999999999999999997 4555 4 22333444589997 457666553
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.81 E-value=0.002 Score=60.47 Aligned_cols=134 Identities=16% Similarity=0.125 Sum_probs=77.1
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHH---------------HHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHH
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLAI---------------AKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDEL 534 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~---------------a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (831)
+-|++.+++++|+++|+++.++|...... ........|+... ...+-....+... ..
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~cp~~p~~~~-~~---- 99 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD---GIYYCPHHPQGSV-EE---- 99 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS---EEEEECCBTTCSS-GG----
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccccc---ceeeccccccccc-cc----
Confidence 44899999999999999999999976311 1111222232110 0000000000000 00
Q ss_pred HHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCee--EEe--cCc-hHHHhhhcCEEEeCCChhHHH
Q 003313 535 IEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG--IAV--AGA-TEAARGAADIVLTEPGLSVIC 609 (831)
Q Consensus 535 ~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg--Ia~--~~~-~~~a~~aadivl~~~~~~~i~ 609 (831)
..+...+..-.|.-=...++.+.-..+.+.||||..+|..|=++|+++ +.+ |.+ .+.....||+++ +++..++
T Consensus 100 ~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl~ 177 (182)
T d2gmwa1 100 FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADLP 177 (182)
T ss_dssp GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGHH
T ss_pred ccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEE--CCHHHHH
Confidence 000000112233344556666665666799999999999999999985 444 322 345566799998 6688888
Q ss_pred HHHH
Q 003313 610 SAVL 613 (831)
Q Consensus 610 ~~i~ 613 (831)
++|+
T Consensus 178 ~~ik 181 (182)
T d2gmwa1 178 QAIK 181 (182)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 8775
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.67 E-value=0.0023 Score=62.08 Aligned_cols=124 Identities=17% Similarity=0.128 Sum_probs=81.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.++++.|+ +|+++.++|+........+.+.+|+... .+ .++...+. ....-.|+-
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~-fd-~i~~s~~~----------------~~~KP~~~~ 160 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDL-FD-SITTSEEA----------------GFFKPHPRI 160 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGG-CS-EEEEHHHH----------------TBCTTSHHH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccc-cc-cccccccc----------------cccchhhHH
Confidence 46799999999997 5899999999999999999999998531 11 11100000 011111222
Q ss_pred HHHHHHHHhhcCCEEEEEcCC-ccChhhhccCCeeEEe---cCchHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDG-VNDAPALKKADIGIAV---AGATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG-~ND~~al~~AdvgIa~---~~~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
=...++.+.-....++||||. .+|+.+-+.|++.... +.........+|+++ ++++.+..+++
T Consensus 161 ~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~ 227 (230)
T d1x42a1 161 FELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (230)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEE--SSTTHHHHHHH
T ss_pred HHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEE--CCHHHHHHHHH
Confidence 234445554455679999997 6899998999886432 223333455789988 55888887775
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.47 E-value=0.00038 Score=66.78 Aligned_cols=120 Identities=9% Similarity=0.013 Sum_probs=80.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.+.++.|++ ++++.++|+.....+..+.++.|+.... ..++...+.. ...-.|+-
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~----------------~~KP~p~~ 142 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRM--AVTISADDTP----------------KRKPDPLP 142 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGE--EEEECGGGSS----------------CCTTSSHH
T ss_pred ccccchhhhhhhhcc-cccccccccccccccccccccccccccc--cccccccccc----------------cchhhhhh
Confidence 356899999999975 7999999999999999999999875311 1111111000 11123444
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe---cCchHHHhhhcCEEEeCCChhHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV---AGATEAARGAADIVLTEPGLSVIC 609 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~---~~~~~~a~~aadivl~~~~~~~i~ 609 (831)
-..+++.++-..+.++||||+.+|..+-++|++.... |..+....+.+|.++ +++..|.
T Consensus 143 ~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i--~~l~dll 204 (207)
T d2hdoa1 143 LLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRF--QKPLDIL 204 (207)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEE--SSGGGGG
T ss_pred hcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEe--CCHHHHH
Confidence 4555565654556799999999999999999988664 434444456788887 4455543
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.46 E-value=0.0015 Score=62.19 Aligned_cols=118 Identities=14% Similarity=0.057 Sum_probs=75.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.++++.|++.|+++.++|+... .+..+.++.|+... . ..++...+. ....-.|+-
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~-f-~~i~~s~~~----------------~~~Kp~~~~ 142 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESY-F-TEILTSQSG----------------FVRKPSPEA 142 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGG-E-EEEECGGGC----------------CCCTTSSHH
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccc-c-ccccccccc----------------cccchhHHH
Confidence 3579999999999999999999998665 45677888998531 0 111111000 011123444
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeE-EecCchHHHhhhcCEEEeCCChhHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI-AVAGATEAARGAADIVLTEPGLSVICSA 611 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgI-a~~~~~~~a~~aadivl~~~~~~~i~~~ 611 (831)
-..+++.+.-....++||||+.+|..+-+.|++.. ++..+. ..+|..+ +++..+.++
T Consensus 143 ~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~----~~~~~~~--~~~~dl~~l 200 (204)
T d2go7a1 143 ATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST----YEGNHRI--QALADISRI 200 (204)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS----CTTEEEC--SSTTHHHHH
T ss_pred HHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCC----CCcCeec--CCHHHHHHH
Confidence 45566666656678999999999999999999853 444443 1344443 345555443
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.37 E-value=0.00036 Score=68.12 Aligned_cols=45 Identities=18% Similarity=0.306 Sum_probs=33.2
Q ss_pred HHHHHHHHHhh-cCCEEEEEcC----CccChhhhccCC-eeEEecCchHHH
Q 003313 548 HKYEIVKILQE-KKHVVGMTGD----GVNDAPALKKAD-IGIAVAGATEAA 592 (831)
Q Consensus 548 ~K~~iv~~l~~-~g~~v~~iGD----G~ND~~al~~Ad-vgIa~~~~~~~a 592 (831)
+|..-++.+.. ..+.|+++|| |.||.+||+.|+ .|+++++..+..
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~~~ 235 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTR 235 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHHHH
Confidence 57777766654 3578999999 889999999997 688887765543
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.33 E-value=0.0029 Score=61.53 Aligned_cols=116 Identities=14% Similarity=-0.000 Sum_probs=76.8
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
-.+.|++.+.+++|++.|+++.++|+..........+.+|+..-. +......++ ....+-.|+
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~-~~~~~~~d~----------------~~~~KP~p~ 188 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDIL-ELVDGHFDT----------------KIGHKVESE 188 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCG-GGCSEEECG----------------GGCCTTCHH
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhh-hhcceeecc----------------ccccCCCcH
Confidence 357899999999999999999999999999988888888874311 000000000 001122233
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe----cCc-hHHHhhhcCEEE
Q 003313 548 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV----AGA-TEAARGAADIVL 600 (831)
Q Consensus 548 ~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~----~~~-~~~a~~aadivl 600 (831)
-=....+.+.-..+.++||||..+|+.+-++|++.... |+. .......++.++
T Consensus 189 ~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i 246 (253)
T d1zs9a1 189 SYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI 246 (253)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEE
T ss_pred HHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEE
Confidence 33445555655667899999999999999999986555 322 222334556666
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.23 E-value=0.0013 Score=60.69 Aligned_cols=90 Identities=10% Similarity=-0.004 Sum_probs=63.7
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeCh-
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDH-LAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFA- 546 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P- 546 (831)
++.|++.++++.|+++|+++.++|+-+ ...+...-+..++.... .. +...-.|
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~--~~-----------------------~~~~~kp~ 100 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYF--IQ-----------------------REIYPGSK 100 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGC--SE-----------------------EEESSSCH
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccc--ee-----------------------eecccCCC
Confidence 478999999999999999999999755 45566666777764210 00 1112222
Q ss_pred -HHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeE
Q 003313 547 -EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI 583 (831)
Q Consensus 547 -~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgI 583 (831)
+.-.++.+.+.-..+.++|+||..+|+.+-++|++-.
T Consensus 101 ~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~ 138 (164)
T d1u7pa_ 101 VTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTC 138 (164)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred hHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEE
Confidence 3334455555556678999999999999999998843
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.07 E-value=0.0073 Score=57.35 Aligned_cols=137 Identities=18% Similarity=0.162 Sum_probs=90.6
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCC--------------------Ccc
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDEN--------------------EAL 529 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~--------------------~~~ 529 (831)
+-||+.++++.+++. ...+++|---.+-..++|+.+|+..+.... ..+++.. +.+
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T----~~~lD~~~~p~ee~e~ll~i~~~~~d~~~e 156 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGT----EVDFDSIAVPEGLREELLSIIDVIASLSGE 156 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEE----BCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecc----cccccccCCChHHHHHHHHHhhhccCccHH
Confidence 348999999999877 677888887888899999999996432111 1111111 011
Q ss_pred cHHH-------------HHHhcCcEEEeChHHHHHHHHHHhhc--CCEEEEEcCCccChhhhccCCe--eEEec-CchHH
Q 003313 530 PVDE-------------LIEKADGFTDVFAEHKYEIVKILQEK--KHVVGMTGDGVNDAPALKKADI--GIAVA-GATEA 591 (831)
Q Consensus 530 ~~~~-------------~~~~~~v~~~~~P~~K~~iv~~l~~~--g~~v~~iGDG~ND~~al~~Adv--gIa~~-~~~~~ 591 (831)
++.+ ++++++.. -...|..+++..-+. -...+++||++.|..||+.|.= |+|++ ||.+=
T Consensus 157 el~e~~d~~f~~~e~~~i~e~Vk~V---Ggg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Y 233 (308)
T d1y8aa1 157 ELFRKLDELFSRSEVRKIVESVKAV---GAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEY 233 (308)
T ss_dssp HHHHHHHHHHHSHHHHHHHHTCBCC---CHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHH
T ss_pred HHHHHHHHHhccchHhhHHhhhccc---CCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccc
Confidence 1111 11111111 124566666554331 2335899999999999998844 88888 88898
Q ss_pred HhhhcCEEEeCCChhHHHHHHHH
Q 003313 592 ARGAADIVLTEPGLSVICSAVLT 614 (831)
Q Consensus 592 a~~aadivl~~~~~~~i~~~i~~ 614 (831)
+...||+.+.+++...+..++..
T Consensus 234 al~eA~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 234 ALKHADVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp HHTTCSEEEECSSTHHHHHHHHH
T ss_pred cccccceEEeccchhHHHHHHHH
Confidence 99999999999998877776653
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.57 E-value=0.0093 Score=55.66 Aligned_cols=109 Identities=14% Similarity=0.026 Sum_probs=69.6
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++++.++.|++.|+++.++|+-+... ...-+.+|+... . ..++.+.+.. ...-.|+-
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~~l~~~-f-d~i~~~~~~~----------------~~KP~p~~ 139 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKTSIAAY-F-TEVVTSSSGF----------------KRKPNPES 139 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHTTCGGG-E-EEEECGGGCC----------------CCTTSCHH
T ss_pred cccchhHHHHHHHHhhhccccccccCccch-hhhhhhhccccc-c-cccccccccc----------------ccCCCHHH
Confidence 467999999999999999999999976654 456778887531 1 1111111110 00112233
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEecCchHHHhhhcCE
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAGATEAARGAADI 598 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~~~~~~~a~~aadi 598 (831)
-....+.+. -+.+.+|||..+|..+-++|++-...=++.+-.++..|+
T Consensus 140 ~~~~~~~~~--~~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 140 MLYLREKYQ--ISSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHHHTT--CSSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHTC
T ss_pred HHHHHHHcC--CCCeEEEeCCHHHHHHHHHcCCEEEEECCCCChHhhcCC
Confidence 333444443 245899999999999999999885544555556665553
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.50 E-value=0.011 Score=57.59 Aligned_cols=124 Identities=10% Similarity=0.099 Sum_probs=80.8
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.|++.++++.|++ |+++.++|+.+.......-+++|+... . ..++...+.. ...-.|+-
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~-f-d~i~~s~~~~----------------~~KP~p~~ 169 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSY-F-DAIVIGGEQK----------------EEKPAPSI 169 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGG-C-SEEEEGGGSS----------------SCTTCHHH
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhcccccc-c-cccccccccc----------------cchhhhhh
Confidence 366899999999985 899999999999999999999998532 1 1111111110 11111222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCc-cChhhhccCCee-EEec--C--chHHHhhhcCEEEeCCChhHHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGV-NDAPALKKADIG-IAVA--G--ATEAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~-ND~~al~~Advg-Ia~~--~--~~~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
=..+++.+.-..+.++||||.. +|+.+-+.|++. +..- . ........+|+++ +++..+.++++
T Consensus 170 ~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i--~~l~eL~~ll~ 238 (247)
T d2gfha1 170 FYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALLQ 238 (247)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHHH
T ss_pred HHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEE--CCHHHHHHHHH
Confidence 2344455554556799999985 899999999996 5431 1 1222234578888 45888877775
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=95.12 E-value=0.0015 Score=58.77 Aligned_cols=95 Identities=14% Similarity=0.016 Sum_probs=59.5
Q ss_pred cCCCCCChHHHHHHHHhCCCeEEEEcCCCHHH----HHHHHH------H-hCCCCCCCCCccccCCcCCCCCcccHHHHH
Q 003313 467 FDPPRHDSSDTIHRALKLGVCVKMITGDHLAI----AKETGR------R-LGIGTNMYPSSLLLGRDKDENEALPVDELI 535 (831)
Q Consensus 467 ~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~----a~~ia~------~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (831)
+|++.|++.+.++.|+++|++++++||.+... ...+.. . .+... ........
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~-----~~~~~~~~------------ 96 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL-----VMQCQREQ------------ 96 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC-----SEEEECCT------------
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcE-----EEeecccc------------
Confidence 57889999999999999999999999987321 111111 0 01100 00000000
Q ss_pred HhcCcEEEeChHHHHHHHHHHhhc-CCEEEEEcCCccChhhhccCCee
Q 003313 536 EKADGFTDVFAEHKYEIVKILQEK-KHVVGMTGDGVNDAPALKKADIG 582 (831)
Q Consensus 536 ~~~~v~~~~~P~~K~~iv~~l~~~-g~~v~~iGDG~ND~~al~~Advg 582 (831)
--.+-.+.-|..+.+.+... ..+++|+||...|+.|.+++++-
T Consensus 97 ----~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 97 ----GDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp ----TCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred ----cccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 00111234577777776554 45678899999999999999875
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=95.11 E-value=0.0078 Score=56.95 Aligned_cols=91 Identities=19% Similarity=0.275 Sum_probs=63.5
Q ss_pred CCCChHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeC
Q 003313 470 PRHDSSDTIHRALKLGVCVKMITGDHL----AIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVF 545 (831)
Q Consensus 470 lr~~~~~~I~~l~~~Gi~v~m~TGD~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 545 (831)
+.|++.+.++.+++.|++|+.+||+.. .|+..+-+.+|+.........+.+.+. .
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~---------------------~ 145 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKP---------------------G 145 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCT---------------------T
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCC---------------------C
Confidence 457999999999999999999999873 477777777898643222222222111 1
Q ss_pred hHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCe-eEEe
Q 003313 546 AEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAV 585 (831)
Q Consensus 546 P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Adv-gIa~ 585 (831)
.+.|.+.++. ..+++++||..+|..+-++|++ +|-+
T Consensus 146 K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 146 QNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp CCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred chHHHHHHHH----cCeEEEecCCHHHHhHHHHcCCCceEe
Confidence 1235555543 4589999999999999888884 5554
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=94.60 E-value=0.016 Score=55.29 Aligned_cols=112 Identities=6% Similarity=-0.019 Sum_probs=71.2
Q ss_pred CCCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChH
Q 003313 468 DPPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAE 547 (831)
Q Consensus 468 D~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~ 547 (831)
.++-|++.+.++.|++.|+++.++|+... +....+..|+.... ..++.+.+.. ..+-.|+
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f--~~i~~~~~~~----------------~~KP~~~ 149 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYF--DAIADPAEVA----------------ASKPAPD 149 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGC--SEECCTTTSS----------------SCTTSTH
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccc--cccccccccc----------------ccccChH
Confidence 34678999999999999999999999765 46677788875321 1112111111 1111222
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccChhhhccCCe-eEEecCchHHHhhhcCEEEe
Q 003313 548 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVAGATEAARGAADIVLT 601 (831)
Q Consensus 548 ~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Adv-gIa~~~~~~~a~~aadivl~ 601 (831)
-=....+.++-..+.++||||..+|+.+-+.|++ .|+++.+.+ ...++.++.
T Consensus 150 ~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~~--~~~~~~~~~ 202 (221)
T d1o08a_ 150 IFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPED--LGDDIVIVP 202 (221)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHH--HCSSSEEES
T ss_pred HHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECChhh--cccccEEcC
Confidence 2233444454455679999999999999999987 455555432 234555553
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=94.25 E-value=0.022 Score=54.07 Aligned_cols=122 Identities=10% Similarity=0.071 Sum_probs=81.1
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
.+.+++.++++.+++.|+++.++|+-.........+..++.... ..++...+.. ..+-.|+-
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~f--d~~~~s~~~~----------------~~KP~p~~ 154 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPVQ----------------VYKPDNRV 154 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGGT----------------CCTTSHHH
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccc--cceeeeeeee----------------ccccHHHH
Confidence 45689999999999999999999999999888888887774310 1111111100 11122333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEEe-c---CchHHHhhhcCEEEeCCChhHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV-A---GATEAARGAADIVLTEPGLSVICS 610 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa~-~---~~~~~a~~aadivl~~~~~~~i~~ 610 (831)
=...++.+.-..+.++||||..+|+.+-++|++-... . ...+.....+|+++ +++..+.+
T Consensus 155 ~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~ 218 (220)
T d1zrna_ 155 YELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVE 218 (220)
T ss_dssp HHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHT
T ss_pred HHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEE--CCHHHHHh
Confidence 3445555655667899999999999999999987553 2 22222334579987 55776654
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=93.50 E-value=0.12 Score=50.45 Aligned_cols=61 Identities=28% Similarity=0.299 Sum_probs=41.6
Q ss_pred HHHHHHHhhcCCEEEEEcCCc-cChhhhccCCe-eEEecCc---hHHHhh---hcCEEEeCCChhHHHHHH
Q 003313 550 YEIVKILQEKKHVVGMTGDGV-NDAPALKKADI-GIAVAGA---TEAARG---AADIVLTEPGLSVICSAV 612 (831)
Q Consensus 550 ~~iv~~l~~~g~~v~~iGDG~-ND~~al~~Adv-gIa~~~~---~~~a~~---aadivl~~~~~~~i~~~i 612 (831)
....+.+.-..+.++||||.. ||+.+-++|++ +|.+.+| .+.... .+|+++ +++..+.++|
T Consensus 192 ~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii--~~l~eL~~~l 260 (261)
T d1vjra_ 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVF--KNLGELAKAV 260 (261)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEE--SSHHHHHHHH
T ss_pred HHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEE--CCHHHHHHHh
Confidence 445555555567899999995 69999999997 6666322 222222 249998 5688887766
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=93.43 E-value=0.015 Score=57.04 Aligned_cols=35 Identities=11% Similarity=0.154 Sum_probs=28.9
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh
Q 003313 472 HDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRL 506 (831)
Q Consensus 472 ~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~ 506 (831)
+++.++|++|+++|++++++|+....+...+++++
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 78899999999999999999987766666665543
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=93.41 E-value=0.033 Score=53.01 Aligned_cols=108 Identities=19% Similarity=0.047 Sum_probs=58.0
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCC--------HHHH-------HHHHHHhCCCCCCCC--CccccCCcCCCCCcccH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDH--------LAIA-------KETGRRLGIGTNMYP--SSLLLGRDKDENEALPV 531 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~--------~~~a-------~~ia~~~gi~~~~~~--~~~~~~~~~~~~~~~~~ 531 (831)
.+-|++.+++++|+++|+++.++|.-. .... ...-++.|+...... ...-.+.......+
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~--- 124 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPD--- 124 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSS---
T ss_pred EecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceEEEecccccccccccccc---
Confidence 356899999999999999999999522 1111 122223343210000 00000000000000
Q ss_pred HHHHHhcCcEEEeChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCe-eEEec
Q 003313 532 DELIEKADGFTDVFAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVA 586 (831)
Q Consensus 532 ~~~~~~~~v~~~~~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Adv-gIa~~ 586 (831)
..+..-.|.--.+..+.+.-....+.||||..+|..|-+.|++ +|.+.
T Consensus 125 -------~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~ 173 (209)
T d2o2xa1 125 -------HPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLV 173 (209)
T ss_dssp -------CTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEE
T ss_pred -------cccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEe
Confidence 0000112333344455555455678999999999999999998 56664
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.23 E-value=0.062 Score=50.92 Aligned_cols=125 Identities=10% Similarity=0.060 Sum_probs=76.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
.+.+++.+.+++|+. +..++|+-....+..+-+++|+.... +..+..+.+.. .-.+.-.|+.
T Consensus 85 ~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f-~~~~~~~~~~~--------------~~~~KP~~~~ 146 (222)
T d2fdra1 85 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYF-APHIYSAKDLG--------------ADRVKPKPDI 146 (222)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGT-TTCEEEHHHHC--------------TTCCTTSSHH
T ss_pred chhhhHHHHhhhccc---cceeeeecchhhhhhhhccccccccc-ceeeccccccc--------------ccccccCHHH
Confidence 356788888877764 55789999999999999999986421 11111100000 0011112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCee-EEecCch--------HHHhhhcCEEEeCCChhHHHHHHH
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG-IAVAGAT--------EAARGAADIVLTEPGLSVICSAVL 613 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Advg-Ia~~~~~--------~~a~~aadivl~~~~~~~i~~~i~ 613 (831)
=....+.+.-..+.++||||..+|+.+-+.|++- |++..+. +....-||+++ +++..+..++.
T Consensus 147 ~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi--~~l~eL~~ll~ 218 (222)
T d2fdra1 147 FLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVIA 218 (222)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHHH
T ss_pred HHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEE--CCHHHHHHHHH
Confidence 2445555555567899999999999999999974 4443221 12233489999 55777766653
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=91.77 E-value=0.041 Score=52.08 Aligned_cols=106 Identities=11% Similarity=0.041 Sum_probs=66.9
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCC----HHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEe
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDH----LAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDV 544 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 544 (831)
.+++++.+.+++|+++|+++.++|+-. ...........|+..- . ..++...+. ....-
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~-f-d~i~~s~~~----------------~~~KP 158 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQH-F-DFLIESCQV----------------GMIKP 158 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGG-C-SEEEEHHHH----------------SCCTT
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhh-h-ceeeehhhc----------------cCCCC
Confidence 467899999999999999999999632 2333444455555320 0 001100000 01122
Q ss_pred ChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCe-eEEecCchHHH
Q 003313 545 FAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVAGATEAA 592 (831)
Q Consensus 545 ~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Adv-gIa~~~~~~~a 592 (831)
.|+--...++.++-..+.++||||..+|+.+-+.|++ +|-+.++.+..
T Consensus 159 ~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~ 207 (222)
T d1cr6a1 159 EPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASAL 207 (222)
T ss_dssp CHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHH
T ss_pred ChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcchHH
Confidence 3454556677777677789999999999999999997 55555554433
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=90.85 E-value=0.35 Score=46.60 Aligned_cols=48 Identities=13% Similarity=0.110 Sum_probs=33.4
Q ss_pred eeccccCCCCCChHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHhCCC
Q 003313 462 GLLPLFDPPRHDSSDTIHRALKLGVCVKMITGDH---LAIAKETGRRLGIG 509 (831)
Q Consensus 462 G~i~~~D~lr~~~~~~I~~l~~~Gi~v~m~TGD~---~~~a~~ia~~~gi~ 509 (831)
|.+.-.+.+=+++.++|+.|+++|++++++|+.. +....+.-+++|+.
T Consensus 12 GTL~~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 12 GVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TTTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CeeEECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 3333344444789999999999999999998544 44444444567874
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=90.38 E-value=0.32 Score=46.25 Aligned_cols=123 Identities=15% Similarity=0.144 Sum_probs=78.5
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEeChHH
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIAKETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDVFAEH 548 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~P~~ 548 (831)
++.+++.+++++|+ |+++.++|..+...+...-+..|+.... ..++.+.+.. ..+-.|+-
T Consensus 93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~f--d~v~~s~~~~----------------~~KP~p~~ 152 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAKR----------------VFKPHPDS 152 (245)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT----------------CCTTSHHH
T ss_pred ccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccc--cccccccccc----------------ccCccHHH
Confidence 56689999999886 7889999999998888888888875311 1122111110 11112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccChhhhccCCeeEE-ec-CchH-HH------------------------hhhcCEEEe
Q 003313 549 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA-VA-GATE-AA------------------------RGAADIVLT 601 (831)
Q Consensus 549 K~~iv~~l~~~g~~v~~iGDG~ND~~al~~AdvgIa-~~-~~~~-~a------------------------~~aadivl~ 601 (831)
=...++.+.-+.+.++||||..+|+.+-++|++--. +. .+.+ .. ....|+++
T Consensus 153 f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i- 231 (245)
T d1qq5a_ 153 YALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV- 231 (245)
T ss_dssp HHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE-
T ss_pred HHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEE-
Confidence 234455555555679999999999999999986433 32 1110 00 12479998
Q ss_pred CCChhHHHHHHH
Q 003313 602 EPGLSVICSAVL 613 (831)
Q Consensus 602 ~~~~~~i~~~i~ 613 (831)
+++..++.+|+
T Consensus 232 -~~l~el~~lv~ 242 (245)
T d1qq5a_ 232 -PALGDLPRLVR 242 (245)
T ss_dssp -SSGGGHHHHHH
T ss_pred -CCHHHHHHHHH
Confidence 57988888775
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.21 E-value=0.083 Score=49.55 Aligned_cols=104 Identities=11% Similarity=0.020 Sum_probs=61.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCCCHHHH----HHHHHHhCCCCCCCCCccccCCcCCCCCcccHHHHHHhcCcEEEe
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGDHLAIA----KETGRRLGIGTNMYPSSLLLGRDKDENEALPVDELIEKADGFTDV 544 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD~~~~a----~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 544 (831)
++.+++.+.+++|++.|+++.++|+...... .......++... . ..++...+. ....-
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~-f-d~i~~s~~~----------------~~~KP 160 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH-F-DFLIESCQV----------------GMVKP 160 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT-S-SEEEEHHHH----------------TCCTT
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhh-c-cEEEecccc----------------ccchh
Confidence 3678999999999999999999997543322 122222232110 0 001100000 01111
Q ss_pred ChHHHHHHHHHHhhcCCEEEEEcCCccChhhhccCCe-eEEecCchH
Q 003313 545 FAEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVAGATE 590 (831)
Q Consensus 545 ~P~~K~~iv~~l~~~g~~v~~iGDG~ND~~al~~Adv-gIa~~~~~~ 590 (831)
.|+-=..+++.+.-....++||||...|+.+-++|++ +|.+.++.+
T Consensus 161 ~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~~ 207 (225)
T d1zd3a1 161 EPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDT 207 (225)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSHHH
T ss_pred HHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCcch
Confidence 2333344555555555678999999999999999999 666655443
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=86.61 E-value=0.081 Score=47.88 Aligned_cols=26 Identities=19% Similarity=0.132 Sum_probs=23.4
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEcCC
Q 003313 469 PPRHDSSDTIHRALKLGVCVKMITGD 494 (831)
Q Consensus 469 ~lr~~~~~~I~~l~~~Gi~v~m~TGD 494 (831)
.+-|++.++++.|++.|++++++|..
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred eECccHHHHHHHHHHcCCceeeeccc
Confidence 34689999999999999999999975
|