Citrus Sinensis ID: 003320

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830
MERSEELCLFVIDEEDNETILLHRISPDDIYRKQEDTIISWRDPEYSTELALSFQEPTGCSYIWDNICNVQRNLNFNSLNSETFHSMNSELRELPPIELSTLPLILKTVTESGIADQMRLTELILNDQDFFRKLMDLFRICEDLENIDGLHMIFKIIKGIILLNSPQIFEKIFGDELMMDIIGSLEYDPDVPHVQHHRNFLKEHVVFKEAIPIRDPLVLSKIHQTYRVGYLKDVVLARVLDEATVANLNSIIHGNNAYVVSLLKDDSTFIQELFARLRSPTTLEESKKNLVHFLHEFCGLSKSLQMVQQLRLFRDLMNEGIFDIVTDALQSQDKKLVLTGTDILILFLNQDPNLLRSYVVRQEGIPLLGLLVKGMITDFGEDMHCQFLEILRSLLDSYTLSGAQRDTIIEIFYEKHLGQLIDVITASCPQEGIAQSASSGGRVESTKPEILSNICELLCFCVLHHPYRIKCNFLLNNVVDKVLLLTRRREKYLVVAAVRFVRTILSRHDEHLINHFVKNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQLVNFEYLASLHSFKVKYEQCLESSGTNNNVNSVDPRKRNDERALEKEEEDYFNDSDEEDTASASHTQRTQAQPVLSNGVAASYSSLSPRSGGLVDYDDDEDDEDYRPPPRKQSETLEEDEGTMDSLRLKRKSASSKEKEPELVKKQRLSKNPKSRDSVFAALCSTLSQAVLPSKKNASSMQLTPHTDDRSKGVGEQEDSSNSINSSNNSSSDEEIHRDKEPTASRSCSDCMHGGSDNRQLSGEDCALIPPKSSPEMAVNGT
cccccccEEEEEEcccccEEEEEEcccccHHHHccccEEEEEccccccccEEEEcccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHcccccHHHHHHHHHccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccHHHHHHHHcHHHHHHHHHHHccccccccccHHHHHHHccccccEEEEcccHHHHHHHHHHEEccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHccHHHHHHHHHHHccccccHHHHHHHHHHHHHHccHHHHHHHHHHHccHHHHHHHHHHHccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccHHHHHHcccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
cccccccEEEEEEcccccEEEEEEEcccccHHccccEEEEEEcccccccEEEEccccccHHHHHHHHHHHHcccccccccHcccccccccccccccccHccHHHHHHHHHHccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHHccHHHHHHHEHHcccccccccHHHHHHHHcccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcHHHHHHHHHccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHHHHHccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHEHcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccccccccccccccHcccHHHHHHHcccccccccccccccccccccccccccccccccccccccccEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccc
MERSEELCLFVIDEEDNETILLhrispddiyrkqedtiiswrdpeystelalsfqeptgcsyiwdNICNvqrnlnfnslnSETFHSMnselrelppielstlPLILKTVTESGIADQMRLTELILNDQDFFRKLMDLFRICEDLENIDGLHMIFKIIKGIillnspqifeKIFGDELMMDIIGsleydpdvphvqhhRNFLkehvvfkeaipirdplvlskIHQTYRVGYLKDVVLARVLDEATVANLNSIIHGNNAYVVSLLKDDSTFIQELFArlrspttleESKKNLVHFLHEFCGLSKSLQMVQQLRLFRDLMNEGIFDIVTDALQSQDKKLVLTGTDILILFLNQDPNLLRSYVVRQEGIPLLGLLVKGMITDFGEDMHCQFLEILRSLLDSYTLSGAQRDTIIEIFYEKHLGQLIDVItascpqegiaqsassggrvestkpeILSNICELLCFCvlhhpyrikcNFLLNNVVDKVLLLTRRREKYLVVAAVRFVRTILSRHDEHLINHFVKNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQLVNFEYLASLHSFKVKYEQClessgtnnnvnsvdprkrndERALEKEEedyfndsdeedtasashtqrtqaqpvlsngvaasysslsprsgglvdydddeddedyrppprkqsetleedegtmDSLRLKRksasskekepelvkkqrlsknpksrDSVFAALCSTLSqavlpskknassmqltphtddrskgvgeqedssnsinssnnsssdeeihrdkeptasrscsdcmhggsdnrqlsgedcalippksspemavngt
MERSEELCLFvideednetillhrispddiyrkQEDTIISWRDPEYSTELALSFQEPTGCSYIWDNICNVQRNLNFNSLNSETFHSMNSELRELPPIELSTLPLILKTVTESGIADQMRLTELILNDQDFFRKLMDLFRICEDLENIDGLHMIFKIIKGIILLNSPQIFEKIFGDELMMDIIGSLEYDPDVPHVQHHRNFLKEHVVFKEAIPIRDPLVLSKIHQTYRVGYLKDVVLARVLDEATVANlnsiihgnNAYVVSLLKDDSTFIQELFARLRSPTTLEESKKNLVHFLHEFCGLSKSLQMVQQLRLFRDLMNEGIFDIVTDALQSQDKKLVLTGTDILILFLNQDPNLLRSYVVRQEGIPLLGLLVKGMITDFGEDMHCQFLEILRSLLDSYTLSGAQRDTIIEIFYEKHLGQLIDVITASCPQEGIAqsassggrvesTKPEILSNICELLCFCVLHHPYRIKCNFLLNNVVDKVLLLTRRREKYLVVAAVRFVRTILSRHDEHLINHFVKNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQLVNFEYLASLHSFKVKYEQCLEssgtnnnvnsvdprkrndERALEKEeedyfndsdEEDTASAshtqrtqaqpvlsNGVAasysslsprsgglvdydddeddedyrppprkqsetleedegtmdslrlkrksasskekepelvkkqrlsknpksrDSVFAALCSTLSQavlpskknassmqltphtddrskgvgeqedssnsinssnnsssdeeiHRDKEPTASRSCSDCMHGgsdnrqlsgedcalippksspemavngt
MERSEELCLFVIDEEDNETILLHRISPDDIYRKQEDTIISWRDPEYSTELALSFQEPTGCSYIWDNICNVQRNLNFNSLNSETFHSMNSELRELPPIELSTLPLILKTVTESGIADQMRLTELILNDQDFFRKLMDLFRICEDLENIDGLHMIFKIIKGIILLNSPQIFEKIFGDELMMDIIGSLEYDPDVPHVQHHRNFLKEHVVFKEAIPIRDPLVLSKIHQTYRVGYLKDVVLARVLDEATVANLNSIIHGNNAYVVSLLKDDSTFIQELFARLRSPTTLEESKKNLVHFLHEFCGLSKSLQMVQQLRLFRDLMNEGIFDIVTDALQSQDKKLVLTGTDILILFLNQDPNLLRSYVVRQEGIPLLGLLVKGMITDFGEDMHCQFLEILRSLLDSYTLSGAQRDTIIEIFYEKHLGQLIDVITASCPQEGIAQSASSGGRVESTKPEILSNICELLCFCVLHHPYRIKCnfllnnvvdkvlllTRRREKYLVVAAVRFVRTILSRHDEHLINHFVKNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQLVNFEYLASLHSFKVKYEQCLESSGTNNNVNSVDPRKRNDERALEKEEEDYFNDSDEEDTASASHTQRTQAQPVLSNGVAASYSSLSPRSGGLVdydddeddedyRPPPRKQSETLEEDEGTMDslrlkrksasskekePELVKKQRLSKNPKSRDSVFAALCSTLSQAVLPSKKNASSMQLTPHTDDRSKGVGEQEDssnsinssnnsssDEEIHRDKEPTASRSCSDCMHGGSDNRQLSGEDCALIPPKSSPEMAVNGT
******LCLFVIDEEDNETILLHRISPDDIYRKQEDTIISWRDPEYSTELALSFQEPTGCSYIWDNICNVQRNLNFNSLNSETFH*****LRELPPIELSTLPLILKTVTESGIADQMRLTELILNDQDFFRKLMDLFRICEDLENIDGLHMIFKIIKGIILLNSPQIFEKIFGDELMMDIIGSLEYDPDVPHVQHHRNFLKEHVVFKEAIPIRDPLVLSKIHQTYRVGYLKDVVLARVLDEATVANLNSIIHGNNAYVVSLLKDDSTFIQELFARLRSPTTLEESKKNLVHFLHEFCGLSKSLQMVQQLRLFRDLMNEGIFDIVTDALQSQDKKLVLTGTDILILFLNQDPNLLRSYVVRQEGIPLLGLLVKGMITDFGEDMHCQFLEILRSLLDSYTLSGAQRDTIIEIFYEKHLGQLIDVITASCP*******************EILSNICELLCFCVLHHPYRIKCNFLLNNVVDKVLLLTRRREKYLVVAAVRFVRTILSRHDEHLINHFVKNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQLVNFEYLASLHSFKVKYEQCL******************************************************************************************************************************************AALC**************************************************************************************************
*****ELCLFVIDEEDNETILLHRISPDDIYRKQEDTIISWRDPEYSTELALSFQEPTGCSYIWDNICNVQR****************SELRELPPIELSTLPLILKTVTESGIADQMRLTELILNDQDFFRKLMDLFRICEDLENIDGLHMIFKIIKGIILLNSPQIFEKIFGDELMMDIIGSLEYDPDVPHVQHHRNFLKEHVVFKEAIPIRDPLVLSKIHQTYRVGYLKDVVLARVLDEATVANLNSIIHGNNAYVVSLLKDDSTFIQELFARLRSPTTLEESKKNLVHFLHEFCGLSKSLQMVQQLRLFRDLMNEGIFDIVTDALQSQDKKLVLTGTDILILFLNQDPNLLRSYVVRQEGIPLLGLLVKGMITDFGEDMHCQFLEILRSLLDSYTLSGAQRDTIIEIFYEKHLGQLIDVITASCPQE*********GRVESTKPEILSNICELLCFCVLHHPYRIKCNFLLNNVVDKVLLLTRRREKYLVVAAVRFVRTILSRHDEHLINHFVKNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQLVNFEYLASLHSFK*******************************************************************************************************************************************************************************************************************************************************
MERSEELCLFVIDEEDNETILLHRISPDDIYRKQEDTIISWRDPEYSTELALSFQEPTGCSYIWDNICNVQRNLNFNSLNSETFHSMNSELRELPPIELSTLPLILKTVTESGIADQMRLTELILNDQDFFRKLMDLFRICEDLENIDGLHMIFKIIKGIILLNSPQIFEKIFGDELMMDIIGSLEYDPDVPHVQHHRNFLKEHVVFKEAIPIRDPLVLSKIHQTYRVGYLKDVVLARVLDEATVANLNSIIHGNNAYVVSLLKDDSTFIQELFARLRSPTTLEESKKNLVHFLHEFCGLSKSLQMVQQLRLFRDLMNEGIFDIVTDALQSQDKKLVLTGTDILILFLNQDPNLLRSYVVRQEGIPLLGLLVKGMITDFGEDMHCQFLEILRSLLDSYTLSGAQRDTIIEIFYEKHLGQLIDVITASCPQEG*************TKPEILSNICELLCFCVLHHPYRIKCNFLLNNVVDKVLLLTRRREKYLVVAAVRFVRTILSRHDEHLINHFVKNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQLVNFEYLASLHSFKVKYEQCLESSGTNNNVNSVDPRKRNDER****************************AQPVLSNGVAASYSSLSPRSGGLVDY************************************************************SVFAALCSTLSQAVLP****************************************************************NRQLSGEDCALIPPK**********
***SEELCLFVIDEEDNETILLHRISPDDIYRKQEDTIISWRDPEYSTELALSFQEPTGCSYIWDNICNVQRNLNFNSLN*ETFHSMNSELRELPPIELSTLPLILKTVTESGIADQMRLTELILNDQDFFRKLMDLFRICEDLENIDGLHMIFKIIKGIILLNSPQIFEKIFGDELMMDIIGSLEYDPDVPHVQHHRNFLKEHVVFKEAIPIRDPLVLSKIHQTYRVGYLKDVVLARVLDEATVANLNSIIHGNNAYVVSLLKDDSTFIQELFARLRSPTTLEESKKNLVHFLHEFCGLSKSLQMVQQLRLFRDLMNEGIFDIVTDALQSQDKKLVLTGTDILILFLNQDPNLLRSYVVRQEGIPLLGLLVKGMITDFGEDMHCQFLEILRSLLDSYTLSGAQRDTIIEIFYEKHLGQLIDVITASCPQ******ASSGGRVESTKPEILSNICELLCFCVLHHPYRIKCNFLLNNVVDKVLLLTRRREKYLVVAAVRFVRTILSRHDEHLINHFVKNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQLVNFEYLASLHSFKVKYEQCLE******************************************************************************************************************************************************************************************************************************CA**P************
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MERSEELCLFVIDEEDNETILLHRISPDDIYRKQEDTIISWRDPEYSTELALSFQEPTGCSYIWDNICNVQRNLNFNSLNSETFHSMNSELRELPPIELSTLPLILKTVTESGIADQMRLTELILNDQDFFRKLMDLFRICEDLENIDGLHMIFKIIKGIILLNSPQIFEKIFGDELMMDIIGSLEYDPDVPHVQHHRNFLKEHVVFKEAIPIRDPLVLSKIHQTYRVGYLKDVVLARVLDEATVANLNSIIHGNNAYVVSLLKDDSTFIQELFARLRSPTTLEESKKNLVHFLHEFCGLSKSLQMVQQLRLFRDLMNEGIFDIVTDALQSQDKKLVLTGTDILILFLNQDPNLLRSYVVRQEGIPLLGLLVKGMITDFGEDMHCQFLEILRSLLDSYTLSGAQRDTIIEIFYEKHLGQLIDVITASCPQEGIAQSASSGGRVESTKPEILSNICELLCFCVLHHPYRIKCNFLLNNVVDKVLLLTRRREKYLVVAAVRFVRTILSRHDEHLINHFVKNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQLVNFEYLASLHSFKVKYEQCLESSGTNNNVNSVDPRKRNDERALEKEEEDYFNDSDEEDTASASHTQRTQAQPVLSNGVAASYSSLSPRSGGLVDYDDDEDDEDYRPPPRKQSETLEEDEGTMDSLRLKRKSASSKEKEPELVKKQRLSKNPKSRDSVFAALCSTLSQAVLPSKKNASSMQLTPHTDDRSKGVGEQEDSSNSINSSNNSSSDEEIHRDKEPTASRSCSDCMHGGSDNRQLSGEDCALIPPKSSPEMAVNGT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query830 2.2.26 [Sep-21-2011]
Q5SP90818 Serine/threonine-protein yes no 0.742 0.753 0.369 1e-113
Q4S6U8818 Serine/threonine-protein N/A no 0.754 0.765 0.359 1e-109
Q6INN7822 Serine/threonine-protein N/A no 0.740 0.748 0.370 1e-107
Q6P2K6820 Serine/threonine-protein yes no 0.740 0.75 0.357 1e-107
Q6IN85833 Serine/threonine-protein yes no 0.740 0.738 0.350 1e-105
Q801Q7820 Serine/threonine-protein N/A no 0.750 0.759 0.348 1e-105
Q7ZX60820 Serine/threonine-protein N/A no 0.750 0.759 0.349 1e-105
Q922R5820 Serine/threonine-protein no no 0.766 0.775 0.342 1e-104
Q6DFT3820 Serine/threonine-protein no no 0.743 0.752 0.35 1e-103
Q5MIZ7849 Serine/threonine-protein no no 0.750 0.733 0.335 2e-96
>sp|Q5SP90|PP4R3_DANRE Serine/threonine-protein phosphatase 4 regulatory subunit 3 OS=Danio rerio GN=smek1 PE=1 SV=1 Back     alignment and function desciption
 Score =  410 bits (1053), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 243/657 (36%), Positives = 385/657 (58%), Gaps = 41/657 (6%)

Query: 1   MERSEELCLFVIDEEDNETILLHRISPDDIYRKQEDTIISWRDPEYSTELALSFQEPTGC 60
           +ER + + L V  E D   +L  +I+P+  Y+KQ+DT+I W + E + +LALSFQE  GC
Sbjct: 32  VERLKGMSLLVRAESDGSLLLESKINPNTAYQKQQDTLIVWSEAE-NYDLALSFQEKAGC 90

Query: 61  SYIWDNICNVQ--------RNLNFNSLNSETFHSMNSELRELPPIELSTLPLILKTVTES 112
             IW+ IC VQ             +    E F  M+S   ELPP ELS L  + + V  S
Sbjct: 91  DEIWEKICQVQGKDPSVDITQELIDESEEERFDDMSSPGLELPPCELSRLEEVAELVA-S 149

Query: 113 GIADQMRLTELIL--NDQDFFRKLMDLFRICEDLENIDGLHMIFKIIKGIILLNSPQIFE 170
            +   +R  +L L   ++ + RKL++LFR+CEDLEN +GLH ++ IIKGI LLN   +FE
Sbjct: 150 SLPSPLRREKLALALENEGYIRKLLELFRVCEDLENREGLHHLYDIIKGIFLLNRTALFE 209

Query: 171 KIFGDELMMDIIGSLEYDPDVPHVQHHRNFLKEHVVFKEAIPIRDPLVLSKIHQTYRVGY 230
            +F +E +MD+IG LE+DP +P  + HR FL     FKE IPI DP +  KIHQTYRV Y
Sbjct: 210 VMFSEECIMDVIGCLEFDPSLPQPRRHREFLTTTARFKEVIPISDPELRQKIHQTYRVQY 269

Query: 231 LKDVVL--ARVLDEATVANLNSIIHGNNAYVVSLLKDDSTFIQELFARLRSPTTLEESKK 288
           ++D+VL    V +E  ++ L+S I  N   +V +L+DD  F+ ELFA+L    T ++ + 
Sbjct: 270 IQDMVLPTPSVFEENMLSTLHSFIFFNKVEIVGMLQDDEKFLTELFAQLTDEATDDDKRH 329

Query: 289 NLVHFLHEFCGLSKSLQMVQQLRLFRDLMNEGIFDIVTDALQSQDKKLVLTGTDILILFL 348
            LV+FL EFC  S++LQ   +   F+ L N GI   +   L   D ++    TDI    +
Sbjct: 330 ELVNFLKEFCAFSQTLQPQNRDAFFKTLSNMGILQALEVILGMDDVQVRGAATDIFSYLV 389

Query: 349 NQDPNLLRSYVVRQ-----EGIPLLGLLVKGMITDFGEDM--HCQFLEILRSLLDS---- 397
             +P+++R +V+++     + I L+ L+++ MI D   ++    Q + +LR+L+D     
Sbjct: 390 EYNPSMVREFVMQESQQNDDDILLINLIIEHMICDTDPELGGAVQLMGLLRTLVDPENML 449

Query: 398 YTLSGAQRDTIIEIFYEKHLGQLIDVITASCPQEGIAQSASSGGRVESTKPEILSNICEL 457
            T +  ++   +  FY+  +  L   + A+  +E  ++        +    ++L+ I EL
Sbjct: 450 ATANKTEKTEFLSFFYKHCMHVLSAPLLANTTEEKPSKD-------DFQTCQLLALIVEL 502

Query: 458 LCFCVLHHPYRIKCNFLLN-NVVDKVLLLTRRREKYLVVAAVRFVRTILSRHDEHLINHF 516
           L FCV HH Y IK N+++N +++ +VL+LT  +  +L + A+RF+R I+   DE    + 
Sbjct: 503 LTFCVEHHTYHIK-NYIINKDILRRVLVLTASQHAFLALCALRFMRKIIGLKDEFYNRYI 561

Query: 517 VKNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQLVNFEYL 576
           ++N L +P+V AF+ NG+RYNL+NSA++E+FEY+R E++KSL  +I++++W  L + +Y+
Sbjct: 562 MRNFLFEPVVKAFLNNGSRYNLINSAIIEMFEYVRVEDVKSLTAHIIENYWKGLEDVDYV 621

Query: 577 ASLHSFKVKYEQCLESSGTNNNVNSV-----DPRKRNDERALEKEEEDYFNDSDEED 628
            +    K++YEQ  E    N  ++S+     + R R D R LE EEE +FN +DEED
Sbjct: 622 QTFKGLKLRYEQQRERQD-NPKLDSMRSILRNHRFRRDARTLEDEEEMWFN-TDEED 676
Regulatory subunit of serine/threonine-protein phosphatase 4.
Danio rerio (taxid: 7955)
>sp|Q4S6U8|PP4R3_TETNG Serine/threonine-protein phosphatase 4 regulatory subunit 3 OS=Tetraodon nigroviridis GN=smek1 PE=3 SV=1 Back     alignment and function description
>sp|Q6INN7|PP4R3_XENLA Serine/threonine-protein phosphatase 4 regulatory subunit 3 OS=Xenopus laevis GN=smek1 PE=2 SV=1 Back     alignment and function description
>sp|Q6P2K6|P4R3A_MOUSE Serine/threonine-protein phosphatase 4 regulatory subunit 3A OS=Mus musculus GN=Smek1 PE=1 SV=1 Back     alignment and function description
>sp|Q6IN85|P4R3A_HUMAN Serine/threonine-protein phosphatase 4 regulatory subunit 3A OS=Homo sapiens GN=SMEK1 PE=1 SV=1 Back     alignment and function description
>sp|Q801Q7|P4R3B_XENLA Serine/threonine-protein phosphatase 4 regulatory subunit 3-B OS=Xenopus laevis GN=smek2-b PE=2 SV=1 Back     alignment and function description
>sp|Q7ZX60|P4R3A_XENLA Serine/threonine-protein phosphatase 4 regulatory subunit 3-A OS=Xenopus laevis GN=smek2-a PE=2 SV=1 Back     alignment and function description
>sp|Q922R5|P4R3B_MOUSE Serine/threonine-protein phosphatase 4 regulatory subunit 3B OS=Mus musculus GN=Smek2 PE=2 SV=2 Back     alignment and function description
>sp|Q6DFT3|PP4R3_XENTR Serine/threonine-protein phosphatase 4 regulatory subunit 3 OS=Xenopus tropicalis GN=smek2 PE=2 SV=1 Back     alignment and function description
>sp|Q5MIZ7|P4R3B_HUMAN Serine/threonine-protein phosphatase 4 regulatory subunit 3B OS=Homo sapiens GN=SMEK2 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query830
255556336884 conserved hypothetical protein [Ricinus 0.996 0.935 0.814 0.0
225431916885 PREDICTED: serine/threonine-protein phos 0.998 0.936 0.799 0.0
224108663861 predicted protein [Populus trichocarpa] 0.978 0.943 0.800 0.0
224101583878 predicted protein [Populus trichocarpa] 0.992 0.938 0.795 0.0
356521791880 PREDICTED: serine/threonine-protein phos 0.996 0.939 0.761 0.0
356564712881 PREDICTED: serine/threonine-protein phos 0.996 0.938 0.758 0.0
356521793897 PREDICTED: serine/threonine-protein phos 0.996 0.921 0.746 0.0
356556026869 PREDICTED: serine/threonine-protein phos 0.987 0.943 0.743 0.0
356532525867 PREDICTED: serine/threonine-protein phos 0.984 0.942 0.741 0.0
449432910888 PREDICTED: serine/threonine-protein phos 0.997 0.932 0.725 0.0
>gi|255556336|ref|XP_002519202.1| conserved hypothetical protein [Ricinus communis] gi|223541517|gb|EEF43066.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score = 1351 bits (3497), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 690/847 (81%), Positives = 756/847 (89%), Gaps = 20/847 (2%)

Query: 1   MERSEELCLFVIDEEDNETILLHRISPDDIYRKQEDTIISWRDPEYSTELALSFQEPTGC 60
           +ERSEEL L+VIDEEDNET+LLHRI PDDIYRKQEDTIISWRDPE+STELALSFQE TGC
Sbjct: 41  LERSEELGLYVIDEEDNETLLLHRIIPDDIYRKQEDTIISWRDPEFSTELALSFQETTGC 100

Query: 61  SYIWDNICNVQRNLNFNSLNSETFHSMNSELRELPPIELSTLPLILKTVTESGIADQMRL 120
           SYIWD+ICNVQR+L F++LN+ETFHSMNSELRELP +ELSTLPLILKTV+ESGIADQMRL
Sbjct: 101 SYIWDHICNVQRSLQFSTLNNETFHSMNSELRELPAVELSTLPLILKTVSESGIADQMRL 160

Query: 121 TELILNDQDFFRKLMDLFRICEDLENIDGLHMIFKIIKGIILLNSPQIFEKIFGDELMMD 180
           TELILNDQ+FFRKLMDLFRICEDL+N DGLHMIFKI++GII LNSPQIFEKIFGDEL+MD
Sbjct: 161 TELILNDQNFFRKLMDLFRICEDLDNTDGLHMIFKIVRGIIFLNSPQIFEKIFGDELIMD 220

Query: 181 IIGSLEYDPDVPHVQHHRNFLKEHVVFKEAIPIRDPLVLSKIHQTYRVGYLKDVVLARVL 240
           IIGSLEYDP++ H+QHHRNFLKEHVVFKEAIPI+DP+VLSKIHQTYRVGYLKDVVLARVL
Sbjct: 221 IIGSLEYDPEIAHIQHHRNFLKEHVVFKEAIPIKDPVVLSKIHQTYRVGYLKDVVLARVL 280

Query: 241 DEATVANLNSIIHGNNAYVVSLLKDDSTFIQELFARLRSPTTLEESKKNLVHFLHEFCGL 300
           DEATVANLNSIIHGNNA VVSLLKDDSTFIQELFARLRSPTT  ESKKNLV+FLHEFC L
Sbjct: 281 DEATVANLNSIIHGNNAVVVSLLKDDSTFIQELFARLRSPTTSAESKKNLVYFLHEFCSL 340

Query: 301 SKSLQMVQQLRLFRDLMNEGIFDIVTDALQSQDKKLVLTGTDILILFLNQDPNLLRSYVV 360
           SKSLQMVQQLRLFRDL+NEGIFDI+T+ALQ QDKKL+LTGTDILILFLNQDPNLLRSYVV
Sbjct: 341 SKSLQMVQQLRLFRDLVNEGIFDIITEALQDQDKKLILTGTDILILFLNQDPNLLRSYVV 400

Query: 361 RQEGIPLLGLLVKGMITDFGEDMHCQFLEILRSLLDSYTLSG--AQRDTIIEIFYEKHLG 418
           RQEGIPLLGLLVKGMITDFGEDMHCQFLEILRSLLDSYTLSG  AQRD+IIEIFYEKHLG
Sbjct: 401 RQEGIPLLGLLVKGMITDFGEDMHCQFLEILRSLLDSYTLSGAHAQRDSIIEIFYEKHLG 460

Query: 419 QLIDVITASCPQEGIAQSA--SSGG--RVE---STKPEILSNICELLCFCVLHHPYRIKC 471
           QLIDVITASCP E I QS+  SSG   RVE   S KPEILSNICELLCFCVLHHPYRIKC
Sbjct: 461 QLIDVITASCPVESIVQSSDRSSGSNRRVENQNSVKPEILSNICELLCFCVLHHPYRIKC 520

Query: 472 NFLLNNVVDKVLLLTRRREKYLVVAAVRFVRTILSRHDEHLINHFVKNNLLKPIVDAFVA 531
           NFLLNN++DKVL+LTRRREKYLVVAAVRFVRTILSRHDEHL NHFVK+NLLKPIVDAFV 
Sbjct: 521 NFLLNNIIDKVLMLTRRREKYLVVAAVRFVRTILSRHDEHLTNHFVKHNLLKPIVDAFVG 580

Query: 532 NGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQLVNFEYLASLHSFKVKYEQCLE 591
           NGNRYNLL+SA+LELFE+IRKENLK L+KYIVDSFWN+LV FE+LAS+ +FKVKYEQCLE
Sbjct: 581 NGNRYNLLHSAILELFEHIRKENLKVLIKYIVDSFWNELVKFEHLASIQAFKVKYEQCLE 640

Query: 592 SSGTNNNVNSVDPRKRNDERALEKEEEDYFN-DSDEEDTASASHTQRTQAQPVLSNGVAA 650
           +  T  +  ++DPR+RNDERALEKEEE+YFN DSDEEDTASA H +R Q +  +SNGVAA
Sbjct: 641 NCVTKISGGTLDPRRRNDERALEKEEEEYFNEDSDEEDTASALHAKRVQPESSISNGVAA 700

Query: 651 SYSSLSPRSGGLVDYDDDEDDEDYRPPPRKQSETLEEDEGTMDSLRLKRKSASSKEKEPE 710
           SY SLS RSGGLVDY DDEDDEDYRPPP+KQSE+LEEDEGTM+SL+LKRK   SK+KE E
Sbjct: 701 SYPSLSSRSGGLVDYADDEDDEDYRPPPKKQSESLEEDEGTMESLKLKRK-LPSKDKESE 759

Query: 711 LVKKQRLSKNPKSRDSVFAALCSTLSQAVLPSKKNASSMQLTPHTDDRSKGVGEQED--- 767
             KKQRL K+ KSR+SVFAALCSTLSQAVLPSKK A S+ +     D +KG+ E      
Sbjct: 760 AAKKQRLGKHSKSRESVFAALCSTLSQAVLPSKKTAGSVHIISSPADGNKGLCEDSHQPK 819

Query: 768 ----SSNSINSSNNSSSDEEIHRDKEPTASRSCSDCMHGGSDNRQLSGEDCALIPPKSSP 823
               S +  +SSNN    EE HR+KEP ASRSCSDC+H  S+N QLSGED  LIPPKSSP
Sbjct: 820 EPAISRSCCDSSNNLR--EENHREKEPAASRSCSDCLHSTSENGQLSGEDGPLIPPKSSP 877

Query: 824 EMAVNGT 830
           EM VNG+
Sbjct: 878 EMTVNGS 884

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225431916|ref|XP_002276905.1| PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224108663|ref|XP_002314928.1| predicted protein [Populus trichocarpa] gi|222863968|gb|EEF01099.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224101583|ref|XP_002312340.1| predicted protein [Populus trichocarpa] gi|222852160|gb|EEE89707.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356521791|ref|XP_003529534.1| PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|356564712|ref|XP_003550593.1| PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3-like [Glycine max] Back     alignment and taxonomy information
>gi|356521793|ref|XP_003529535.1| PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|356556026|ref|XP_003546328.1| PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3-like [Glycine max] Back     alignment and taxonomy information
>gi|356532525|ref|XP_003534822.1| PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3-like [Glycine max] Back     alignment and taxonomy information
>gi|449432910|ref|XP_004134241.1| PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query830
UNIPROTKB|F6R1L1820 SMEK1 "Uncharacterized protein 0.745 0.754 0.360 1.9e-104
UNIPROTKB|Q6IN85833 SMEK1 "Serine/threonine-protei 0.433 0.432 0.395 3.1e-104
MGI|MGI:1915984820 Smek1 "SMEK homolog 1, suppres 0.745 0.754 0.359 5.1e-104
UNIPROTKB|F1SD90820 SMEK1 "Uncharacterized protein 0.745 0.754 0.359 5.1e-104
UNIPROTKB|F1NPW9844 SMEK1 "Uncharacterized protein 0.745 0.733 0.359 3.6e-103
MGI|MGI:2144474820 Smek2 "SMEK homolog 2, suppres 0.509 0.515 0.341 3.2e-102
UNIPROTKB|G3V5Z3706 SMEK1 "Uncharacterized protein 0.745 0.876 0.359 8.8e-102
UNIPROTKB|Q5MIZ7849 SMEK2 "Serine/threonine-protei 0.509 0.498 0.341 1.1e-99
UNIPROTKB|F1SQL1756 SMEK2 "Uncharacterized protein 0.469 0.515 0.339 5.5e-99
FB|FBgn0024555980 flfl "falafel" [Drosophila mel 0.737 0.624 0.333 7.9e-96
UNIPROTKB|F6R1L1 SMEK1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
 Score = 1010 (360.6 bits), Expect = 1.9e-104, Sum P(2) = 1.9e-104
 Identities = 236/654 (36%), Positives = 372/654 (56%)

Query:     1 MERSEELCLFVIDEEDNETILLHRISPDDIYRKQEDTIISWRDPEYSTELALSFQEPTGC 60
             +ER + + L V  E D   +L  +I+P+  Y+KQ+DT+I W + E + +LALSFQE  GC
Sbjct:    32 VERLKGMSLLVRAESDGSLLLESKINPNTAYQKQQDTLIVWSEAE-NYDLALSFQEKAGC 90

Query:    61 SYIWDNICNVQR---NLNF-----NSLNSETFHSMNSELRELPPIELSTLPLILKTVTES 112
               IW+ IC VQ    +++      +    E F  M+S   ELP  ELS L  I + V  S
Sbjct:    91 DEIWEKICQVQGKDPSVDITQDLVDESEEERFDDMSSPGLELPSCELSRLEEIAELVASS 150

Query:   113 GIADQMRLTELIL--NDQDFFRKLMDLFRICEDLENIDGLHMIFKIIKGIILLNSPQIFE 170
              +   +R  +L L   ++ + +KL++LF +CEDLENI+GLH +++IIKGI LLN   +FE
Sbjct:   151 -LPSPLRREKLALALENEGYIKKLLELFHVCEDLENIEGLHHLYEIIKGIFLLNRTALFE 209

Query:   171 KIFGDELMMDIIGSLEYDPDVPHVQHHRNFLKEHVVFKEAIPIRDPLVLSKIHQTYRVGY 230
              +F +E +MD+IG LEYDP +   + HR FL +   FKE IPI DP +  KIHQTYRV Y
Sbjct:   210 VMFSEECIMDVIGCLEYDPALSQPRKHREFLTKTAKFKEVIPISDPELKQKIHQTYRVQY 269

Query:   231 LKDVVLAR--VLDEATVANLNSIIHGNNAYVVSLLKDDSTFIQELFARLRSPTTLEESKK 288
             ++D+VL    V +E  ++ L+S I  N   +V +L++D  F+ +LFA+L    T EE ++
Sbjct:   270 IQDMVLPTPSVFEENMLSTLHSFIFFNKVEIVGMLQEDEKFLTDLFAQLTDEATDEEKRQ 329

Query:   289 NLVHFLHEFCGLSKSLQMVQQLRLFRDLMNEGIFDIVTDALQSQDKKLVLTGTDILILFL 348
              LV+FL EFC  S++LQ   +   F+ L N GI   +   L   D ++    TDI    +
Sbjct:   330 ELVNFLKEFCAFSQTLQPQNRDAFFKTLSNMGILPALEVILGMDDTQVRSAATDIFSYLV 389

Query:   349 NQDPNLLRSYVVRQ-----EGIPLLGLLVKGMITDFGEDMH--CQFLEILRSLLDSYT-L 400
               +P+++R +V+++     + I L+ L+++ MI D   ++    Q + +LR+L+D    L
Sbjct:   390 EYNPSMVREFVMQEAQQNDDDILLINLIIEHMICDTDPELGGAVQLMGLLRTLVDPENML 449

Query:   401 SGAQRDTIIEI--FYEKHLGQLIDVITASCPQEGIAQSASSGGRVESTKPEILSNICELL 458
             + A +    E   F+ KH    + V+TA           S     +    ++L+ + ELL
Sbjct:   450 ATANKTEKTEFLGFFYKHC---MHVLTAPLLANTTEDKPSKD---DFQTAQLLALVLELL 503

Query:   459 CFCVLHHPYRIKCXXXXXXXXXXXXXXTRRREKYLVVAAVRFVRTILSRHDEHLINHFVK 518
              FCV HH Y IK                  +  +L + A+RF R I+   DE    + +K
Sbjct:   504 TFCVEHHTYHIKNYIINKDILRRVLVLMASKHAFLALCALRFKRKIIGLKDEFYNRYIMK 563

Query:   519 NNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQLVNFEYLAS 578
             + L +P+V AF+ NG+RYNL+NSA++E+FE+IR E++KSL  ++V+++W  L + +Y+ +
Sbjct:   564 SFLFEPVVKAFLNNGSRYNLMNSAIIEMFEFIRVEDIKSLTAHVVENYWKALEDVDYVQT 623

Query:   579 LHSFKVKYEQCLESSGTN--NNVNSV--DPRKRNDERALEKEEEDYFNDSDEED 628
                 K+++EQ  E       +++ S+  + R R D R LE EEE +FN +DE+D
Sbjct:   624 FKGLKLRFEQQRERQDNPKLDSMRSILRNHRYRRDARTLEDEEEMWFN-TDEDD 676
GO:0045722 "positive regulation of gluconeogenesis" evidence=IEA
GO:0030289 "protein phosphatase 4 complex" evidence=IEA
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0005737 "cytoplasm" evidence=IEA
GO:0005634 "nucleus" evidence=IEA
UNIPROTKB|Q6IN85 SMEK1 "Serine/threonine-protein phosphatase 4 regulatory subunit 3A" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1915984 Smek1 "SMEK homolog 1, suppressor of mek1 (Dictyostelium)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1SD90 SMEK1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1NPW9 SMEK1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:2144474 Smek2 "SMEK homolog 2, suppressor of mek1 (Dictyostelium)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|G3V5Z3 SMEK1 "Uncharacterized protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q5MIZ7 SMEK2 "Serine/threonine-protein phosphatase 4 regulatory subunit 3B" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1SQL1 SMEK2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
FB|FBgn0024555 flfl "falafel" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00033120001
SubName- Full=Chromosome chr5 scaffold_64, whole genome shotgun sequence; (885 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query830
pfam04802193 pfam04802, SMK-1, Component of IIS longevity pathw 2e-91
>gnl|CDD|147119 pfam04802, SMK-1, Component of IIS longevity pathway SMK-1 Back     alignment and domain information 
 Score =  285 bits (731), Expect = 2e-91
 Identities = 97/193 (50%), Positives = 135/193 (69%), Gaps = 1/193 (0%)

Query: 125 LNDQDFFRKLMDLFRICEDLENIDGLHMIFKIIKGIILLNSPQIFEKIFGDELMMDIIGS 184
           L ++D+  KL+ LF +CEDLEN+D LH++  I+K +ILLN  QI E I  DE +M ++G 
Sbjct: 1   LENEDYIPKLIPLFHMCEDLENLDDLHLLCNIVKTLILLNDSQILEIILSDENIMGVVGC 60

Query: 185 LEYDPDVPHVQ-HHRNFLKEHVVFKEAIPIRDPLVLSKIHQTYRVGYLKDVVLARVLDEA 243
           LEYDP+ P  + +HR FL ++  FKE IPI++P +  KIHQTYR+ YLKDVVL RVLD+ 
Sbjct: 61  LEYDPEFPQPKANHRQFLTQNAKFKEVIPIKNPELRQKIHQTYRLQYLKDVVLPRVLDDN 120

Query: 244 TVANLNSIIHGNNAYVVSLLKDDSTFIQELFARLRSPTTLEESKKNLVHFLHEFCGLSKS 303
           T + LNS I  N   +V+LL+DD  F++ELFA L   +T +E +++LV FLHEFC ++KS
Sbjct: 121 TFSTLNSFIFFNQVEIVTLLQDDEKFLEELFALLTDSSTSDERRRDLVLFLHEFCNIAKS 180

Query: 304 LQMVQQLRLFRDL 316
           LQ   +   F+ L
Sbjct: 181 LQPQSRSTFFKTL 193

SMK-1 is a component of the IIs longevity pathway which regulates aging in C.elegans. Specifically, SMK-1 influences DAF-16-dependant regulation of the aging process by regulating the transcriptional specificity of DAF-16 activity. SMK-1 plays a role in longevity by modulating the transcriptional specificity of DAF-16. Length = 193

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 830
KOG2175458 consensus Protein predicted to be involved in carb 100.0
PF04802193 SMK-1: Component of IIS longevity pathway SMK-1; I 100.0
PF10508503 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; 96.13
KOG2160342 consensus Armadillo/beta-catenin-like repeat-conta 95.48
KOG2175458 consensus Protein predicted to be involved in carb 95.43
PF01602526 Adaptin_N: Adaptin N terminal region; InterPro: IP 93.63
PF12460415 MMS19_C: RNAPII transcription regulator C-terminal 93.54
PF03224312 V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004 93.11
KOG0166514 consensus Karyopherin (importin) alpha [Intracellu 92.69
PTZ00429 746 beta-adaptin; Provisional 92.45
PF00568111 WH1: WH1 domain; InterPro: IPR000697 The EVH1 (WH1 92.36
cd00835122 RanBD Ran-binding domain. Ran-binding domain; This 92.05
PF01602526 Adaptin_N: Adaptin N terminal region; InterPro: IP 92.0
PF10508503 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; 91.79
cd00020120 ARM Armadillo/beta-catenin-like repeats. An approx 90.74
cd00837104 EVH1 EVH1 (Enabled, Vasp-Homology) or WASP Homolog 89.27
PF14664371 RICTOR_N: Rapamycin-insensitive companion of mTOR, 88.06
PF04499475 SAPS: SIT4 phosphatase-associated protein; InterPr 86.28
PLN03200 2102 cellulose synthase-interactive protein; Provisiona 85.38
KOG0166514 consensus Karyopherin (importin) alpha [Intracellu 83.96
PF12348228 CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi 82.65
>KOG2175 consensus Protein predicted to be involved in carbohydrate metabolism [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.9e-95  Score=802.89  Aligned_cols=442  Identities=44%  Similarity=0.746  Sum_probs=420.7

Q ss_pred             ChhhHHHHHHHHhcChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHcCChhhHhHhhcchhHhHHhhhcccCCCCC
Q 003320          113 GIADQMRLTELILNDQDFFRKLMDLFRICEDLENIDGLHMIFKIIKGIILLNSPQIFEKIFGDELMMDIIGSLEYDPDVP  192 (830)
Q Consensus       113 s~~~rerla~~Il~~~~YI~KLl~LF~~cEdle~~~~Lh~L~~IvK~IilLNd~~IiE~llsDe~i~~VVG~LEYDPe~p  192 (830)
                      ++..|+.++.++ ++++||+||+++|+.|||++++++||++|+|+|+|+++|...|+|.|++|++||+|+|||||||++|
T Consensus         5 ~~~~r~~~~~~i-e~e~~f~~Li~lF~~Ced~e~~d~L~~l~~Iik~i~~ln~~~iLe~~~~d~~im~v~g~lEydp~~~   83 (458)
T KOG2175|consen    5 TDQRREKLVLAL-ENENYFQKLIELFHTCEDLENTDGLHHLFSIIKNIFLLNKSDILESIFDDECIMDVIGCLEYDPAVP   83 (458)
T ss_pred             cHHHHHHHHHHH-hcchHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhcCchHHHHHhccccccccccccccCccCC
Confidence            355677777544 5689999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccchHHHhhhcCCceeeeecCChHHHHHHHhhhhcceeeehhcc--cccchhhHHhhHHHHHhhHHHHHHHhhcCHHHH
Q 003320          193 HVQHHRNFLKEHVVFKEAIPIRDPLVLSKIHQTYRVGYLKDVVLA--RVLDEATVANLNSIIHGNNAYVVSLLKDDSTFI  270 (830)
Q Consensus       193 ~~~nHR~fL~~~a~FKEVVPI~d~~i~~KIHqTYRLqYLKDVVLa--RiLDD~t~s~LnSlIffNqveIV~~Lq~d~~FL  270 (830)
                      ++++||+||...++|||||||.||.+++|||||||+|||||||||  +++||++++++||+||||+++||++||+|.+|+
T Consensus        84 ~~k~HR~~l~~~~~f~e~ipi~dp~ll~kIhqt~r~q~l~d~vl~~~~~~~~a~~~~l~s~i~~~~~~ii~~lqed~~~l  163 (458)
T KOG2175|consen   84 QSKKHREFLSLLAKFKEVIPISDPELLAKIHQTFRVQYLKDVVLPEPGVFDEATGNTLNSFIFFNKVNIVSLLQEDEKFL  163 (458)
T ss_pred             ChhhhHHHHHhhccceeeeecCCHHHHHHHHHHHHHHHhheeeecCCcchhcchhHHHHHHHHHhhhhhhhhhhcCchHH
Confidence            988899999999999999999999999999999999999999999  899999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCcHHhHHHHHHHHHHHHHhhhccChHhHHHHHHHHHhcCcHHHHHHHHcCCCchhhhhhhHHHHHHHhc
Q 003320          271 QELFARLRSPTTLEESKKNLVHFLHEFCGLSKSLQMVQQLRLFRDLMNEGIFDIVTDALQSQDKKLVLTGTDILILFLNQ  350 (830)
Q Consensus       271 ~eLF~~l~~~~~~~e~rrdlV~FL~E~c~isK~LQ~~~R~~lf~~Lv~~GL~~vi~~~L~~~d~~ir~~atDIL~~iieh  350 (830)
                      .+||+++++++++.++|++++.|+||||+++|+||++.|.+||++|++.|||++++++++++|.++|.+++||+..++++
T Consensus       164 ~eLf~~l~~~~t~~qkr~~li~~lke~c~~s~~L~~~~~~~~fkTlv~~~i~~~le~~~~~~d~~~r~~~~di~~~~ve~  243 (458)
T KOG2175|consen  164 IELFARLRSESTDDQKRDDLVHFLKEFCSFSKALQPQSRDAFFKTLVNKGILDALEYVLKMPDTQVRSAATDILARLVEM  243 (458)
T ss_pred             HHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcCcchhhHHHHHHHHhhhHHHHHHHhcCCcchhhHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHhcCCcc-----hHHHHHHHHhccCChhH--HHHHHHHHHHhcCCCCCCch--hhhHHHHHHHHhhHHHHH
Q 003320          351 DPNLLRSYVVRQEGIP-----LLGLLVKGMITDFGEDM--HCQFLEILRSLLDSYTLSGA--QRDTIIEIFYEKHLGQLI  421 (830)
Q Consensus       351 dPslvR~~i~~qe~~~-----Ll~~Li~~ll~d~d~gl--k~Ql~eaLk~LLDp~~m~~~--e~d~fL~~FY~~~~~~L~  421 (830)
                      +|.++|++.+.++..+     ++++++++|+++.++.+  .+|++.++++||||++|.++  ++.+|+++||++|++.+.
T Consensus       244 ~~~~i~~~~~~~~~~~~~~~~~~nl~~s~~l~d~d~~~~~~s~~~~i~~tll~~~~~~~~~~~~se~l~~~~~~c~~~~~  323 (458)
T KOG2175|consen  244 SPSMIRSFTLGEALDPDDEKLLLNLAISHMLEDFDPELSGASQLMLILSTLLDPENMLTLASEKSEFLNFFYKHCMHSLS  323 (458)
T ss_pred             CHHHHHHHHHHhhcCchhhHHHHHHHHHhhccccCccccchHHHHHHHHHhhCccccCCccchhHHHhhhhhccccccCC
Confidence            9999999999876544     89999999999988755  59999999999999999885  899999999999999998


Q ss_pred             HHHHhcCCCcccccccCCCCccccCcHHHHHHHHHHHHHHHhhCCcchhhhHhhchHHHHHHHhhhccchhHHHHHHHHH
Q 003320          422 DVITASCPQEGIAQSASSGGRVESTKPEILSNICELLCFCVLHHPYRIKCNFLLNNVVDKVLLLTRRREKYLVVAAVRFV  501 (830)
Q Consensus       422 ~pL~~~~p~~~~~~~~~~~~~~~~~~~~ll~~l~ELL~Fcv~~H~yriK~~il~~nll~kVl~Ll~~~~K~L~LaAlRFl  501 (830)
                      +|...+...              .++++.++.+++++|||+.||+|+||+|++++++++||+.|+++++++|+++|+||.
T Consensus       324 ~p~~~~~~s--------------~~sa~~~~v~~~~l~fc~~~~s~si~n~~~~~d~~~~vlvl~~s~~~~l~~~a~~~~  389 (458)
T KOG2175|consen  324 APLVGNTSS--------------NQSAQNLSVILELLTFCVEHHSFSIKNYIVSSDLLNKVLVLMSSKHSFLVLGALRYL  389 (458)
T ss_pred             Ccchhhccc--------------ccccchhhhhhhhhhHHHHhcccccccHhhcchhhccceehhccccHHHHHHHHHhh
Confidence            888764211              146788999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCchhHHHHHHHhhCCHHHHHHHHHHhCCCCcchHHHHHHHHHHHHhhChHHHHHHHHHhhHhhcc
Q 003320          502 RTILSRHDEHLINHFVKNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQLV  571 (830)
Q Consensus       502 R~iI~l~Defy~ryiIk~nLf~PIl~~f~~ng~R~NLlnSA~LElfefIr~eNik~Li~hlve~y~~~l~  571 (830)
                      |.++.++|++|+||++++  |+|+++.|.+||.||||+|||+|+||||||.||+|+|++|+|++||+.++
T Consensus       390 ~~~~~L~d~~~~~~ivk~--~~p~~~~~~~n~trynll~s~~l~l~efi~~e~~k~l~~~~v~~~~~~~~  457 (458)
T KOG2175|consen  390 RKIPILEDEKYNKYIVKS--FKPVIDGFIENGTRYNLLNSAVLELFEFIRVEDIKPLLSYIVENFQNGLA  457 (458)
T ss_pred             hccchhchHHHHHHHhhc--cccchhhHhhcCChhHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhhhcc
Confidence            999999999999999999  99999999999999999999999999999999999999999999999875

>PF04802 SMK-1: Component of IIS longevity pathway SMK-1; InterPro: IPR006887 This is a conserved region which characterises a number of eukaryotic proteins of unknown function Back     alignment and domain information
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells Back     alignment and domain information
>KOG2160 consensus Armadillo/beta-catenin-like repeat-containing protein [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG2175 consensus Protein predicted to be involved in carbohydrate metabolism [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment Back     alignment and domain information
>PF12460 MMS19_C: RNAPII transcription regulator C-terminal; InterPro: IPR024687 This domain, approximately 60 amino acids in length, is found in the N-terminal region of MMS19 proteins Back     alignment and domain information
>PF03224 V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004908 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane Back     alignment and domain information
>KOG0166 consensus Karyopherin (importin) alpha [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PTZ00429 beta-adaptin; Provisional Back     alignment and domain information
>PF00568 WH1: WH1 domain; InterPro: IPR000697 The EVH1 (WH1, RanBP1-WASP) domain is found in multi-domain proteins implicated in a diverse range of signalling, nuclear transport and cytoskeletal events Back     alignment and domain information
>cd00835 RanBD Ran-binding domain Back     alignment and domain information
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment Back     alignment and domain information
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells Back     alignment and domain information
>cd00020 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information
>cd00837 EVH1 EVH1 (Enabled, Vasp-Homology) or WASP Homology (WH1) domain Back     alignment and domain information
>PF14664 RICTOR_N: Rapamycin-insensitive companion of mTOR, N-term Back     alignment and domain information
>PF04499 SAPS: SIT4 phosphatase-associated protein; InterPro: IPR007587 The SAPS family consists of proteins that associate with the SIT4 phosphatase protein [] Back     alignment and domain information
>PLN03200 cellulose synthase-interactive protein; Provisional Back     alignment and domain information
>KOG0166 consensus Karyopherin (importin) alpha [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query830
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-10
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 79.5 bits (195), Expect = 3e-15
 Identities = 87/612 (14%), Positives = 184/612 (30%), Gaps = 168/612 (27%)

Query: 110 TESGIADQMRLT--ELILNDQDFFRKLMDLFRICEDLENIDGLHMIFK------IIK--- 158
            E+G   + +    +++   +D F    D    C+D++  D    I        II    
Sbjct: 9   FETG---EHQYQYKDILSVFEDAFVDNFD----CKDVQ--DMPKSILSKEEIDHIIMSKD 59

Query: 159 ---------GIILLNSPQIFEKIFGDELMMD---IIGSLEYDPDVPHV-------QHHRN 199
                      +L    ++ +K   + L ++   ++  ++ +   P +       Q  R 
Sbjct: 60  AVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRL 119

Query: 200 FLKEHVVFKEAIPIRDPL-----VLSKIHQTYRV------GYLKDVVLARVL-DEATVAN 247
           +    V  K  +    P       L ++     V      G  K  V   V         
Sbjct: 120 YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCK 179

Query: 248 LNSIIH----GNNAYVVSLLKDDSTFIQELFARLRSP-TTLEESKKNLVHFLHEFCGLSK 302
           ++  I      N     ++L+     +Q+L  ++    T+  +   N+   +H      +
Sbjct: 180 MDFKIFWLNLKNCNSPETVLE----MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR 235

Query: 303 SLQMVQQ----LRLFRDLMNEGI---FDI------------VTDALQSQ--------DKK 335
            L   +     L +  ++ N      F++            VTD L +            
Sbjct: 236 RLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHS 295

Query: 336 LVLT---GTDILILFLNQDPNLLRSYVVRQEGIPLLGLLVKGMITDFGEDMHCQFLEILR 392
           + LT      +L+ +L+  P  L   V+     P        +I +   D    +     
Sbjct: 296 MTLTPDEVKSLLLKYLDCRPQDLPREVLT--TNPR----RLSIIAESIRDGLATWDNWKH 349

Query: 393 SLLDSYTLSGAQRDTIIEIFYEKHLGQLIDVITASCPQE-GIAQSASSGGRVESTK-PEI 450
              D  T       TIIE         L             +           S   P I
Sbjct: 350 VNCDKLT-------TIIESSLN----VLEPAEYRKMFDRLSVFP--------PSAHIPTI 390

Query: 451 LSNICELLCFCVL-HHPYRIKCNFLLNNVVDKVLLLTRRREKYLVVAAVRFVRTILSRHD 509
           L          ++     +     ++N +     L+ ++ ++  +           S   
Sbjct: 391 L--------LSLIWFDVIKSDVMVVVNKLHKY-SLVEKQPKESTI-----------SIPS 430

Query: 510 EHLINHFVKNNLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENLKSLVKYIVDSFWNQ 569
            +L         LK  ++      N Y L + ++++ +   +  +   L+   +D ++  
Sbjct: 431 IYL--------ELKVKLE------NEYAL-HRSIVDHYNIPKTFDSDDLIPPYLDQYFYS 475

Query: 570 -----LVNFEYLASLHSFKVKY------EQCLESSGTNNNVNSVDPRKRNDERALEKEEE 618
                L N E+   +  F++ +      EQ +    T  N +       N  + L+   +
Sbjct: 476 HIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASG---SILNTLQQLKF-YK 531

Query: 619 DYFNDSDEEDTA 630
            Y  D+D +   
Sbjct: 532 PYICDNDPKYER 543
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query830
4hxt_A252 De novo protein OR329; structural genomics, PSI-bi 97.93
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 97.74
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 97.42
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 97.37
4hxt_A252 De novo protein OR329; structural genomics, PSI-bi 97.35
4b8j_A528 Importin subunit alpha-1A; transport protein, nucl 97.27
4b8j_A528 Importin subunit alpha-1A; transport protein, nucl 97.27
1wa5_B530 Importin alpha subunit; nuclear transport/complex, 97.14
1wa5_B530 Importin alpha subunit; nuclear transport/complex, 97.05
3tpo_A529 Importin subunit alpha-2; nuclear import, protein 96.84
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 96.74
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 96.73
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 96.72
3tpo_A529 Importin subunit alpha-2; nuclear import, protein 96.67
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 96.65
3ul1_B510 Importin subunit alpha-2; arm repeat, armadillo re 96.54
3ul1_B510 Importin subunit alpha-2; arm repeat, armadillo re 96.21
1jdh_A529 Beta-catenin; beta-catenin, protein-protein comple 95.99
2z6h_A644 Catenin beta-1, beta-catenin; C-terminal domain, a 95.74
4fdd_A 852 Transportin-1; heat repeats, karyopherin, nuclear 95.6
2z6h_A644 Catenin beta-1, beta-catenin; C-terminal domain, a 95.57
1rrp_B134 Nuclear pore complex protein NUP358; complex (smal 95.24
4fdd_A 852 Transportin-1; heat repeats, karyopherin, nuclear 95.03
2z6g_A780 B-catenin; FULL-length, beta-catenin, cell adhesio 94.96
1jdh_A529 Beta-catenin; beta-catenin, protein-protein comple 94.71
4gmo_A 684 Putative uncharacterized protein; ARM, heat, solen 94.62
1ibr_B462 P95, importin beta-1 subunit, nuclear factor; smal 94.18
2z6g_A 780 B-catenin; FULL-length, beta-catenin, cell adhesio 93.8
3b2a_A265 TON_1937, putative uncharacterized protein; heat-r 93.56
2qk2_A242 LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2 93.41
1ibr_B462 P95, importin beta-1 subunit, nuclear factor; smal 93.08
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 92.87
3now_A810 UNC-45 protein, SD10334P; armadillo repeat, HSP90, 92.48
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 92.42
2bpt_A861 Importin beta-1 subunit; nuclear transport, nucleo 92.25
1w63_A618 Adapter-related protein complex 1 gamma 1 subunit; 92.18
3now_A810 UNC-45 protein, SD10334P; armadillo repeat, HSP90, 92.15
3grl_A 651 General vesicular transport factor P115; vesicle t 92.03
1w63_A618 Adapter-related protein complex 1 gamma 1 subunit; 91.85
1qgr_A 876 Protein (importin beta subunit); transport recepto 91.83
3nmz_A458 APC variant protein; protein-protein complex, arma 91.63
2vgl_A621 Adaptor protein complex AP-2, alpha 2 subunit; cyt 91.5
2bpt_A 861 Importin beta-1 subunit; nuclear transport, nucleo 91.04
3opb_A778 SWI5-dependent HO expression protein 4; heat and a 90.24
1qgr_A876 Protein (importin beta subunit); transport recepto 89.39
1xm9_A457 Plakophilin 1; armadillo repeat, cell adhesion; 2. 88.48
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 87.32
3nmz_A458 APC variant protein; protein-protein complex, arma 84.64
2qk2_A242 LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2 83.71
3grl_A651 General vesicular transport factor P115; vesicle t 82.95
1xm9_A457 Plakophilin 1; armadillo repeat, cell adhesion; 2. 82.57
2npp_B449 PP2A, B subunit, serine/threonine-protein phosphat 82.29
3fga_B403 Serine/threonine-protein phosphatase 2A 56 kDa RE 81.64
3l6x_A584 Catenin delta-1; catenin, armadillo, ARM, JMD, CE 80.85
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
Probab=97.93  E-value=0.0017  Score=64.18  Aligned_cols=218  Identities=15%  Similarity=0.147  Sum_probs=158.5

Q ss_pred             HHHHHHHhCCCCCcHHhHHHHHHHHHHHHHhhhccChHhHHHHHHHHHhcCcHHHHHHHHcCCCchhhhhhhHHHHHHHh
Q 003320          270 IQELFARLRSPTTLEESKKNLVHFLHEFCGLSKSLQMVQQLRLFRDLMNEGIFDIVTDALQSQDKKLVLTGTDILILFLN  349 (830)
Q Consensus       270 L~eLF~~l~~~~~~~e~rrdlV~FL~E~c~isK~LQ~~~R~~lf~~Lv~~GL~~vi~~~L~~~d~~ir~~atDIL~~iie  349 (830)
                      ++.|...+++++  .+.|..++..|..++.-..        ..-..+++.|.++.+-..|.+++..++..++..|..+..
T Consensus         4 i~~L~~~L~~~~--~~~~~~a~~~L~~l~~~~~--------~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~   73 (252)
T 4hxt_A            4 VEKLVKLLTSTD--SETQKEAARDLAEIASGPA--------SAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIAS   73 (252)
T ss_dssp             HHHHHHHTTCSC--HHHHHHHHHHHHHHHTSCH--------HHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHcCCC--HHHHHHHHHHHHHHhcCCc--------HHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHc
Confidence            566777777655  5678888877777654321        234567788999999999999999999999999999999


Q ss_pred             cChHHHHHHHHhcCCcchHHHHHHHHhccCChhHHHHHHHHHHHhcCCCCCCchhhhHHHHHHHH-hhHHHHHHHHHhcC
Q 003320          350 QDPNLLRSYVVRQEGIPLLGLLVKGMITDFGEDMHCQFLEILRSLLDSYTLSGAQRDTIIEIFYE-KHLGQLIDVITASC  428 (830)
Q Consensus       350 hdPslvR~~i~~qe~~~Ll~~Li~~ll~d~d~glk~Ql~eaLk~LLDp~~m~~~e~d~fL~~FY~-~~~~~L~~pL~~~~  428 (830)
                      +++.. |..+.+.   ..+..|++.| .+.++.++.....+|..|.....       .....+.+ ..++.|++-|..  
T Consensus        74 ~~~~~-~~~~~~~---~~i~~l~~ll-~~~~~~v~~~a~~~L~~l~~~~~-------~~~~~~~~~~~i~~L~~~l~~--  139 (252)
T 4hxt_A           74 GPDEA-IKAIVDA---GGVEVLVKLL-TSTDSEVQKEAARALANIASGPD-------EAIKAIVDAGGVEVLVKLLTS--  139 (252)
T ss_dssp             SCHHH-HHHHHHT---THHHHHHHHT-TCSSHHHHHHHHHHHHHHTTSCH-------HHHHHHHHTTHHHHHHHHTTC--
T ss_pred             CChHH-HHHHHHC---CCHHHHHHHH-cCCCHHHHHHHHHHHHHHHcCCH-------HHHHHHHHCCCHHHHHHHHcC--
Confidence            88875 5556553   2455566644 56789999999999999974211       12222333 345666554421  


Q ss_pred             CCcccccccCCCCccccCcHHHHHHHHHHHHHHHhhCCcchhhhHhhchHHHHHHHhhhccchhHHHHHHHHHHHHhcCc
Q 003320          429 PQEGIAQSASSGGRVESTKPEILSNICELLCFCVLHHPYRIKCNFLLNNVVDKVLLLTRRREKYLVVAAVRFVRTILSRH  508 (830)
Q Consensus       429 p~~~~~~~~~~~~~~~~~~~~ll~~l~ELL~Fcv~~H~yriK~~il~~nll~kVl~Ll~~~~K~L~LaAlRFlR~iI~l~  508 (830)
                                       ..+.+....+..|+.+...+.. .+..++..+++..++.++.+.+.-++..|++++.++.. .
T Consensus       140 -----------------~~~~~~~~a~~~L~~l~~~~~~-~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~-~  200 (252)
T 4hxt_A          140 -----------------TDSEVQKEAARALANIASGPDE-AIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIAS-G  200 (252)
T ss_dssp             -----------------SCHHHHHHHHHHHHHHTTSCHH-HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTT-S
T ss_pred             -----------------CCHHHHHHHHHHHHHHHcCCHH-HHHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHc-C
Confidence                             1234566777888877765443 34567778999999999999999999999999999886 4


Q ss_pred             hhHHHHHHHhhCCHHHHHHHHH
Q 003320          509 DEHLINHFVKNNLLKPIVDAFV  530 (830)
Q Consensus       509 Defy~ryiIk~nLf~PIl~~f~  530 (830)
                      +.-..+.+++.+++.+++.++.
T Consensus       201 ~~~~~~~l~~~~~i~~L~~ll~  222 (252)
T 4hxt_A          201 PTSAIKAIVDAGGVEVLQKLLT  222 (252)
T ss_dssp             BHHHHHHHHHTTHHHHHHHGGG
T ss_pred             CHHHHHHHHHCCCHHHHHHHHC
Confidence            5557788999999999988774
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Back     alignment and structure
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A Back     alignment and structure
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Back     alignment and structure
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Back     alignment and structure
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Back     alignment and structure
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... Back     alignment and structure
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Back     alignment and structure
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Back     alignment and structure
>1rrp_B Nuclear pore complex protein NUP358; complex (small GTPase/nuclear protein), small GTPase, nuclear transport; HET: GNP; 2.96A {Homo sapiens} SCOP: b.55.1.3 Back     alignment and structure
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Back     alignment and structure
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A Back     alignment and structure
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Back     alignment and structure
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus} Back     alignment and structure
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} Back     alignment and structure
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Back     alignment and structure
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Back     alignment and structure
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Back     alignment and structure
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A Back     alignment and structure
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1 Back     alignment and structure
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Back     alignment and structure
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A Back     alignment and structure
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1 Back     alignment and structure
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Back     alignment and structure
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A Back     alignment and structure
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A Back     alignment and structure
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A Back     alignment and structure
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Back     alignment and structure
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} Back     alignment and structure
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A Back     alignment and structure
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Back     alignment and structure
>2npp_B PP2A, B subunit, serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; heat repeat, signaling protein, hydrolase-hydrolase inhibito; HET: 1ZN; 3.30A {Homo sapiens} SCOP: a.118.1.20 Back     alignment and structure
>3fga_B Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; PP2A, shugoshin, nucleus, phosphoprotein, hydrolase, iron, M metal-binding, methylation, protein phosphatase, cell cycle division; HET: 1ZN; 2.70A {Homo sapiens} PDB: 2iae_B* 2nym_B* 2nyl_B* Back     alignment and structure
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 830
d1mkea1114 b.55.1.4 (A:31-144) Actin regulatory protein WASP 4e-10
>d1mkea1 b.55.1.4 (A:31-144) Actin regulatory protein WASP {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 114 Back     information, alignment and structure

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Enabled/VASP homology 1 domain (EVH1 domain)
domain: Actin regulatory protein WASP
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.6 bits (134), Expect = 4e-10
 Identities = 7/71 (9%), Positives = 22/71 (30%), Gaps = 2/71 (2%)

Query: 2   ERSEELCLFVIDEEDNETILLHRISPDDIYRKQEDTIISWRDPEYSTELALSFQEPTGCS 61
                  L + D +D + +    +  + +Y        ++       ++AL+F       
Sbjct: 43  NPQRSYFLRIFDIKDGKLLWEQELYNNFVYNSPRGYFHTFAGDT--CQVALNFANEEEAK 100

Query: 62  YIWDNICNVQR 72
                + ++  
Sbjct: 101 KFRKAVTDLLG 111

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query830
d1mkea1114 Actin regulatory protein WASP {Rat (Rattus norvegi 99.0
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 97.62
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 97.52
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 97.51
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 97.44
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 97.29
d1xkea1118 Ran-binding protein 2 {Human (Homo sapiens) [TaxId 95.72
d1jdha_529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 95.19
d1jdha_529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 94.65
d1egxa_115 Vasodilator-stimulated phosphoprotein (VASP) {Huma 94.3
d2bpta1 861 Importin beta {Baker's yeast (Saccharomyces cerevi 93.64
d1ibrb_458 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 93.04
d1xm9a1457 Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} 92.56
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 90.27
d1qgra_ 876 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 89.55
d2vgla_584 Adaptin alpha C subunit N-terminal fragment {Mouse 88.59
d2bpta1 861 Importin beta {Baker's yeast (Saccharomyces cerevi 88.31
d1ibrb_458 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 87.67
d1evha_111 Enabled {Mouse (Mus musculus) [TaxId: 10090]} 86.48
d1qgra_ 876 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 84.46
d2vglb_579 Adaptin beta subunit N-terminal fragment {Human (H 80.44
>d1mkea1 b.55.1.4 (A:31-144) Actin regulatory protein WASP {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Enabled/VASP homology 1 domain (EVH1 domain)
domain: Actin regulatory protein WASP
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.00  E-value=1.7e-10  Score=105.51  Aligned_cols=69  Identities=10%  Similarity=0.199  Sum_probs=64.3

Q ss_pred             cccceeEEEecCCCcceeEeecCCCchhhhccCceeEeccCCccccccccccCccchhHHHHHHHHHhhcc
Q 003320            4 SEELCLFVIDEEDNETILLHRISPDDIYRKQEDTIISWRDPEYSTELALSFQEPTGCSYIWDNICNVQRNL   74 (830)
Q Consensus         4 ~~~~~L~V~sE~d~~~LL~s~I~~~d~YqkQqeTLIvWte~~~g~DlALSFQe~~GC~~IWe~I~~VQ~~~   74 (830)
                      .++.+|+|.++.++.+|++++|.++..|++|++|+++|.+.+  ..+|||||++++|..+|+.|+++|++.
T Consensus        45 ~~~~~l~v~d~~~~~vi~e~eI~~~~~Y~k~~~~Fh~~~~~~--~~~GL~F~~~~eA~~f~~~i~~~~~~~  113 (114)
T d1mkea1          45 QRSYFLRIFDIKDGKLLWEQELYNNFVYNSPRGYFHTFAGDT--CQVALNFANEEEAKKFRKAVTDLLGRR  113 (114)
T ss_dssp             TTEEEEEEECSSSCSEEEEEECCSSCCCBCSSSSEEEEECSS--SEEEEEESSHHHHHHHHHHHHHHHHHC
T ss_pred             CCeEEEEEEECCCCeEEEEEEccCCcEEeccCCeEEEEEcCC--ceEEEeeCCHHHHHHHHHHHHHHHhcc
Confidence            578999999999999999999999999999999999996643  689999999999999999999999864
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1xkea1 b.55.1.3 (A:7-124) Ran-binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1egxa_ b.55.1.4 (A:) Vasodilator-stimulated phosphoprotein (VASP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1evha_ b.55.1.4 (A:) Enabled {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure