Citrus Sinensis ID: 003364
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 826 | 2.2.26 [Sep-21-2011] | |||||||
| P98205 | 1107 | Phospholipid-transporting | yes | no | 1.0 | 0.746 | 0.875 | 0.0 | |
| P70704 | 1149 | Probable phospholipid-tra | yes | no | 0.983 | 0.706 | 0.396 | 1e-165 | |
| Q29449 | 1149 | Probable phospholipid-tra | yes | no | 0.983 | 0.706 | 0.393 | 1e-162 | |
| Q9Y2Q0 | 1164 | Probable phospholipid-tra | yes | no | 0.983 | 0.697 | 0.387 | 1e-162 | |
| P98200 | 1148 | Probable phospholipid-tra | no | no | 0.974 | 0.701 | 0.383 | 1e-154 | |
| O94296 | 1258 | Probable phospholipid-tra | yes | no | 0.980 | 0.643 | 0.385 | 1e-151 | |
| Q9NTI2 | 1148 | Probable phospholipid-tra | no | no | 0.975 | 0.702 | 0.380 | 1e-151 | |
| P39524 | 1355 | Probable phospholipid-tra | yes | no | 0.981 | 0.598 | 0.378 | 1e-149 | |
| Q8TF62 | 1192 | Probable phospholipid-tra | no | no | 0.986 | 0.683 | 0.354 | 1e-149 | |
| Q9Y2G3 | 1177 | Probable phospholipid-tra | no | no | 0.970 | 0.681 | 0.367 | 1e-147 |
| >sp|P98205|ALA2_ARATH Phospholipid-transporting ATPase 2 OS=Arabidopsis thaliana GN=ALA2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1519 bits (3932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 723/826 (87%), Positives = 778/826 (94%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKR++YINDDE S++L C NR+SNRKYTL NFLPKNLWEQFSRFMNQYFLLIACLQLWSL
Sbjct: 1 MKRFVYINDDEASKELCCDNRISNRKYTLWNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSA+KEAWDDY+RYLSDKKANEKEVW+VKQGIKK IQ+QDI+
Sbjct: 61 ITPVNPASTWGPLIFIFAVSASKEAWDDYHRYLSDKKANEKEVWIVKQGIKKHIQAQDIQ 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVL+GTSDPQGVCYVETAALDGETDLKTR+IP+AC+G+D ELLH
Sbjct: 121 VGNIVWLRENDEVPCDLVLLGTSDPQGVCYVETAALDGETDLKTRVIPSACVGIDLELLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD N+RL PPFIDNDVC LTIKNT+LQSCYLRNTEWACGV+VY
Sbjct: 181 KMKGVIECPVPDKDIRRFDANMRLFPPFIDNDVCSLTIKNTLLQSCYLRNTEWACGVSVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGN+TKLGM+RGI EPKLTA+DAMIDKLTGAIFVFQIVVV+VLG AGNVWKDTEARKQWY
Sbjct: 241 TGNQTKLGMSRGIAEPKLTAMDAMIDKLTGAIFVFQIVVVLVLGIAGNVWKDTEARKQWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
V YP+E PWYELLVIPLRFELLCSIMIPISIKVSLDLVK LYAKFI+WD EMID ET T
Sbjct: 301 VQYPEEAPWYELLVIPLRFELLCSIMIPISIKVSLDLVKGLYAKFIEWDVEMIDQETGTA 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
S+A NTAISEDL QVEYILTDKTGTLT+N+MIFRRCCIGGIFYGNE GDALKD LLNAI
Sbjct: 361 SYAANTAISEDLGQVEYILTDKTGTLTDNKMIFRRCCIGGIFYGNENGDALKDAQLLNAI 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
TSGS DVIRFLTVMA+CNTV+P +SKAG I+YKAQSQDE+ALV AA++LHMV V KNA++
Sbjct: 421 TSGSTDVIRFLTVMAICNTVLPVQSKAGDIVYKAQSQDEDALVIAASKLHMVFVGKNANL 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LEI+FNGSV++YE+LE LEFTSDRKRMSVVVKDC +G I LLSKGADEAILPYA AGQQT
Sbjct: 481 LEIRFNGSVIRYEVLEILEFTSDRKRMSVVVKDCQNGKIILLSKGADEAILPYARAGQQT 540
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
RT +AVE YSQLGLRTLCLAWRE+EE+EY EWS+ FKEASS L+DREWRIAEVCQRLEH
Sbjct: 541 RTIGDAVEHYSQLGLRTLCLAWRELEENEYLEWSVKFKEASSLLVDREWRIAEVCQRLEH 600
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
DL +LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLYILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LL IDGKTE++V RSLERVLLTMRIT SEPKDVAFV+DGWALEIALKH+RK F ELAILS
Sbjct: 661 LLMIDGKTEEDVSRSLERVLLTMRITASEPKDVAFVIDGWALEIALKHHRKDFVELAILS 720
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTAICCRVTPSQKAQLVE+LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVEILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIL 826
ADYSIG+FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI
Sbjct: 781 ADYSIGRFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIF 826
|
Involved in transport of phospholipids. Contributes to transmembrane flipping of lipids. Requires an interaction with a protein of the ALIS family for activity. Specific for phosphatidylserine and has no activity with lysolipid, phosphatidylcholine or phosphatidylethanolamine. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 1 |
| >sp|P70704|AT8A1_MOUSE Probable phospholipid-transporting ATPase IA OS=Mus musculus GN=Atp8a1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 581 bits (1498), Expect = e-165, Method: Compositional matrix adjust.
Identities = 331/834 (39%), Positives = 497/834 (59%), Gaps = 22/834 (2%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I+IN + ++ +C N +S KY ++ FLP+ L+ QF R N +FL IA LQ ++
Sbjct: 37 RTIFINQPQLTK--FCNNHVSTAKYNVITFLPRFLYSQFRRAANSFFLFIALLQQIPDVS 94
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+FI AV+A KE +D R+ +D N+K+ V++ G +++ + + VG
Sbjct: 95 PTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVNVG 154
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL-IPAACMGMDFELLHK 181
+IV ++ + +P D VL+ +S+PQ +CY+ET+ LDGET+LK R +PA D + L +
Sbjct: 155 DIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLKIRQGLPATSDIKDIDSLMR 214
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
I G IEC P++ + F GN+RL + PL +L+ LRNT+W G+ VYT
Sbjct: 215 ISGRIECESPNRHLYDFVGNIRL----DGHGTVPLGADQILLRGAQLRNTQWVHGIVVYT 270
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYV 301
G++TKL P KL+ V+ + + +F I + +V +W + K WY
Sbjct: 271 GHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRHSGKDWY- 329
Query: 302 LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPS 361
L+ + L F +L + +IPIS+ V+L++VK A FI+WD +M TDT +
Sbjct: 330 LHLHYGGASNFGLNFLTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTAA 389
Query: 362 HATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNET--GD--ALKDVGLL 417
A + ++E+L QV+YI +DKTGTLT N M F++C I G+ YG + GD D LL
Sbjct: 390 MARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGQSSQFGDEKTFNDPSLL 449
Query: 418 NAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLV 474
+ + + P + FLT+MAVC+T +P + + I+Y+A S DE ALV AA QL+ V
Sbjct: 450 DNLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDEGALVRAAKQLNFVFT 508
Query: 475 NKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP-Y 533
+ + I G +YE+L LEFTS RKRMSVVV+ SG + L KGAD I
Sbjct: 509 GRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVVVR-TPSGKLRLYCKGADTVIYERL 567
Query: 534 AHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAE 593
A + ++ +EQ++ GLRTLC A E+ E +++EW ++ AS+++ +R ++ E
Sbjct: 568 AETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFEEWRAVYHRASTSVQNRLLKLEE 627
Query: 594 VCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653
+ +E +L++LG TAIED+LQD VPETIETL KA I W+LTGDKQ TAI I SC +
Sbjct: 628 SYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGDKQETAINIGHSCRLL 687
Query: 654 SPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH-YRKA 712
+ ++ I+ + D +L R T+ + D A ++DG L+ AL R+
Sbjct: 688 --KRNMGMIVINEGSLDGTRETLSRHCTTLGDALRKENDFALIIDGKTLKYALTFGVRQY 745
Query: 713 FTELAILSRTAICCRVTPSQKAQLVELL-KSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771
F +LA+ + ICCRV+P QK+++VE++ K TLAIGDG NDV MIQ A +GVGISG
Sbjct: 746 FLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVITLAIGDGANDVSMIQTAHVGVGISG 805
Query: 772 REGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825
EGLQAA ++DYSI +F++LK L++VHG ++YNR + Y FYK++++ I+I
Sbjct: 806 NEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNRVSKCILYCFYKNIVLYIIEI 859
|
May play a role in the transport of aminophospholipids from the outer to the inner leaflet of various membranes and the maintenance of asymmetric distribution of phospholipids, mainly in secretory vesicles. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q29449|AT8A1_BOVIN Probable phospholipid-transporting ATPase IA OS=Bos taurus GN=ATP8A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 573 bits (1476), Expect = e-162, Method: Compositional matrix adjust.
Identities = 328/834 (39%), Positives = 491/834 (58%), Gaps = 22/834 (2%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I+IN + ++ +C N +S KY ++ FLP+ L+ QF R N +FL IA LQ ++
Sbjct: 37 RTIFINQPQLTK--FCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQIPDVS 94
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+FI AV+A KE +D R+ +D N+K+ V++ G +++ + + VG
Sbjct: 95 PTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVNVG 154
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL-IPAACMGMDFELLHK 181
+IV ++ + +P D VL+ +S+PQ +CY+ET+ LDGET+LK R +PA D + L +
Sbjct: 155 DIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLKIRQGLPATSDIKDIDSLMR 214
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
+ G IEC P++ + F GN+RL PL +L+ LRNT+W G+ VYT
Sbjct: 215 LSGRIECESPNRHLYDFVGNIRL----DGRSTVPLGADQILLRGAQLRNTQWVHGIVVYT 270
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYV 301
G++TKL P KL+ V+ + + +F I + +V +W + + WY
Sbjct: 271 GHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRHSGRDWY- 329
Query: 302 LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPS 361
L + L F +L + +IPIS+ V+L++VK A FI+WD +M TDT +
Sbjct: 330 LNLNYGGANNFGLNFLTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTAA 389
Query: 362 HATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNET--GD--ALKDVGLL 417
A + ++ +L QV+YI +DKTGTLT N M F++C I G+ YG + GD D LL
Sbjct: 390 MARTSNLNVELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGQNSQFGDEKTFSDSSLL 449
Query: 418 NAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLV 474
+ + P + FLT+MAVC+T +P + + I+Y+A S DE ALV AA QL+ V
Sbjct: 450 ENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDEGALVRAAKQLNFVFT 508
Query: 475 NKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP-Y 533
+ + I G +YE+L LEFTS RKRMSV+V+ SG + L KGAD I
Sbjct: 509 GRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVR-TPSGKLRLYCKGADTVIYDRL 567
Query: 534 AHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAE 593
A + ++ +EQ++ GLRTLC A E+ E ++QEW ++ AS+++ +R ++ E
Sbjct: 568 AETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYHRASTSVQNRLLKLEE 627
Query: 594 VCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653
+ +E +L++LG TAIED+LQD VPETIETL KA I W+LTGDKQ TAI I SC
Sbjct: 628 SYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGDKQETAINIGHSCKL- 686
Query: 654 SPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH-YRKA 712
++ I+ + D +L R T+ + D A ++DG L+ AL R+
Sbjct: 687 -RRKNMGMIVINEGSLDGTRETLSRHCTTLGDALRKENDFALIIDGKTLKYALTFGVRQY 745
Query: 713 FTELAILSRTAICCRVTPSQKAQLVELL-KSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771
F +LA+ + ICCRV+P QK+++VE++ K TLAIGDG NDV MIQ A +GVGISG
Sbjct: 746 FLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVITLAIGDGANDVSMIQTAHVGVGISG 805
Query: 772 REGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825
EGLQAA ++DYSI +F++LK L++VHG ++YNR + Y FYK++++ I+I
Sbjct: 806 NEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNRGSKCILYCFYKNIVLYIIEI 859
|
May play a role in the transport of aminophospholipids from the outer to the inner leaflet of various membranes and the maintenance of asymmetric distribution of phospholipids, mainly in secretory vesicles. Bos taurus (taxid: 9913) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9Y2Q0|AT8A1_HUMAN Probable phospholipid-transporting ATPase IA OS=Homo sapiens GN=ATP8A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 572 bits (1473), Expect = e-162, Method: Compositional matrix adjust.
Identities = 329/849 (38%), Positives = 495/849 (58%), Gaps = 37/849 (4%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I+IN + ++ +C N +S KY ++ FLP+ L+ QF R N +FL IA LQ ++
Sbjct: 37 RTIFINQPQLTK--FCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQIPDVS 94
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+FI AV+A KE +D R+ +D N+K+ V++ G +++ + + VG
Sbjct: 95 PTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVAVG 154
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL-IPAACMGMDFELLHK 181
IV + + +P DL+ + +S+PQ +CY+ET+ LDGET+LK R +PA D + L +
Sbjct: 155 EIVKVTNGEHLPADLISLSSSEPQAMCYIETSNLDGETNLKIRQGLPATSDIKDVDSLMR 214
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
I G IEC P++ + F GN+RL + PL +L+ LRNT+W G+ VYT
Sbjct: 215 ISGRIECESPNRHLYDFVGNIRL----DGHGTVPLGADQILLRGAQLRNTQWVHGIVVYT 270
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYV 301
G++TKL P KL+ V+ + + +F I + +V +W + K WY
Sbjct: 271 GHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRHSGKDWY- 329
Query: 302 LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPS 361
L + L F +L + +IPIS+ V+L++VK A FI+WD +M TDT +
Sbjct: 330 LNLNYGGASNFGLNFLTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTAA 389
Query: 362 HATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN---------------- 405
A + ++E+L QV+YI +DKTGTLT N M F++C I G+ YG+
Sbjct: 390 MARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGHVPEPEDYGCSPDEWQN 449
Query: 406 -ETGD--ALKDVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDE 459
+ GD D LL + + P + FLT+MAVC+T +P + + I+Y+A S DE
Sbjct: 450 SQFGDEKTFSDSSLLENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDE 508
Query: 460 EALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNI 519
ALV AA QL+ V + + I G +YE+L LEFTS RKRMSV+V+ SG +
Sbjct: 509 GALVRAAKQLNFVFTGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVR-TPSGKL 567
Query: 520 SLLSKGADEAILP-YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFK 578
L KGAD I A + ++ +EQ++ GLRTLC A E+ E ++QEW +++
Sbjct: 568 RLYCKGADTVIYDRLAETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYQ 627
Query: 579 EASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGD 638
AS+++ +R ++ E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGD
Sbjct: 628 RASTSVQNRLLKLEESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGD 687
Query: 639 KQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVD 698
KQ TAI I SC + + ++ I+ + D +L R T+ + D A ++D
Sbjct: 688 KQETAINIGHSCKLL--KKNMGMIVINEGSLDGTRETLSRHCTTLGDALRKENDFALIID 745
Query: 699 GWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELL-KSCDYRTLAIGDGGND 756
G L+ AL R+ F +LA+ + ICCRV+P QK+++VE++ K TLAIGDG ND
Sbjct: 746 GKTLKYALTFGVRQYFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVVTLAIGDGAND 805
Query: 757 VRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYK 816
V MIQ A +GVGISG EGLQAA ++DYSI +F++LK L+++HG ++YNR + Y FYK
Sbjct: 806 VSMIQTAHVGVGISGNEGLQAANSSDYSIAQFKYLKNLLMIHGAWNYNRVSKCILYCFYK 865
Query: 817 SLLICFIQI 825
++++ I+I
Sbjct: 866 NIVLYIIEI 874
|
May play a role in the transport of aminophospholipids from the outer to the inner leaflet of various membranes and the maintenance of asymmetric distribution of phospholipids, mainly in secretory vesicles. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P98200|AT8A2_MOUSE Probable phospholipid-transporting ATPase IB OS=Mus musculus GN=Atp8a2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 547 bits (1409), Expect = e-154, Method: Compositional matrix adjust.
Identities = 329/857 (38%), Positives = 487/857 (56%), Gaps = 52/857 (6%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R IY+N ++ +C NR+S KY+++ FLP+ L+EQ R N +FL IA LQ ++
Sbjct: 16 RIIYLNQSHLNK--FCDNRISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQQIPDVS 73
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+ I ++ KE +D+ R+ +D N+K+ V++ G+ I +++ VG
Sbjct: 74 PTGRYTTLVPLVIILTIAGIKEIIEDFKRHKADNAVNKKKTIVLRNGMWHTIMWKEVAVG 133
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDF-ELLHK 181
+IV + +P D+VL +S+PQG+CYVETA LDGET+LK R + M ++L K
Sbjct: 134 DIVKVLNGQYLPADMVLFSSSEPQGMCYVETANLDGETNLKIRQGLSHTTDMQTRDVLMK 193
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
+ G IEC GP++ + F GNL L L +L+ LRNT+W GV VYT
Sbjct: 194 LSGRIECEGPNRHLYDFTGNLHL----DGKSSVALGPDQILLRGTQLRNTQWVFGVVVYT 249
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYV 301
G+++KL K + V+ + + +F +V+ +V W + K WY+
Sbjct: 250 GHDSKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSVGALFWNGSHGGKSWYI 309
Query: 302 ----LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPET 357
F Y LL F +L + +IPIS+ V+L++VK A FI+WD +M E
Sbjct: 310 KKMDTNSDNFG-YNLLT----FIILYNNLIPISLLVTLEVVKYTQALFINWDMDMYYIEN 364
Query: 358 DTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYG------------- 404
DTP+ A + ++E+L QV+Y+ +DKTGTLT N M F++C I G+ YG
Sbjct: 365 DTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSIAGVTYGHFPELAREQSSDD 424
Query: 405 --------NETGDALKDVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYK 453
N++ D D LL I P + FLT++AVC+TV+P K I+Y+
Sbjct: 425 FCRMTSCTNDSCD-FNDPRLLKNIEDQHPTAPCIQEFLTLLAVCHTVVPEKD-GDEIIYQ 482
Query: 454 AQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKD 513
A S DE ALV A +L V + + I+ G + IL LEF+SDRKRMSV+V+
Sbjct: 483 ASSPDEAALVKGAKKLGFVFTGRTPYSVIIEAMGQEQTFGILNVLEFSSDRKRMSVIVR- 541
Query: 514 CHSGNISLLSKGADEAILPYAHAGQQTRTFVEA---VEQYSQLGLRTLCLAWREVEEDEY 570
SG + L KGAD I + + ++ E +E ++ GLRTLC+A+ ++ E+EY
Sbjct: 542 LPSGQLRLYCKGADNVI--FERLSKDSKYMEETLCHLEYFATEGLRTLCVAYADLSENEY 599
Query: 571 QEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGI 630
+EW +++EAS L DR R+ E + +E +L +LG TAIEDRLQ GVPETI TL KA I
Sbjct: 600 EEWLKVYQEASIILKDRAQRLEECYEIIEKNLLLLGATAIEDRLQAGVPETIATLLKAEI 659
Query: 631 NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690
W+LTGDKQ TAI I SC +S LL D + D ++ + + +
Sbjct: 660 KIWVLTGDKQETAINIGYSCRLVSQNMALILLKED--SLDATRAAITQHCTDLGNLLGKE 717
Query: 691 KDVAFVVDGWALEIALK-HYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTL 748
DVA ++DG L+ AL R++F +LA+ + ICCRV+P QK+++V+++K TL
Sbjct: 718 NDVALIIDGHTLKYALSFEVRRSFLDLALSCKAVICCRVSPLQKSEIVDVVKKRVKAITL 777
Query: 749 AIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAF 808
AIGDG NDV MIQ A +GVGISG EG+QA +DY+I +F +L++L+LVHG +SYNR
Sbjct: 778 AIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDYAIAQFSYLEKLLLVHGAWSYNRVTK 837
Query: 809 LSQYSFYKSLLICFIQI 825
Y FYK++++ I++
Sbjct: 838 CILYCFYKNVVLYIIEL 854
|
Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|O94296|YOOC_SCHPO Probable phospholipid-transporting ATPase C887.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC887.12 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 538 bits (1385), Expect = e-151, Method: Compositional matrix adjust.
Identities = 328/851 (38%), Positives = 494/851 (58%), Gaps = 41/851 (4%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I +ND S + + N +S KY+ FLPK L EQFS++ N +FL A +Q IT
Sbjct: 145 RQIILND--YSANHFLHNAVSTCKYSAFTFLPKFLKEQFSKYANLFFLFTAVVQQIPGIT 202
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
PVN +T GP++ + +VS KE +D R D++ NE +V++ Q +D+ VG
Sbjct: 203 PVNRYTTIGPMLIVLSVSGIKEIMEDIKRKKQDQELNESPCYVLQGTGFVEKQWKDVVVG 262
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR-LIPAACMGMDFELLHK 181
+IV + P DLVL+ +S+P+G+CY+ETA LDGET+LK + +P + L +
Sbjct: 263 DIVKIVSETFFPADLVLLSSSEPEGLCYIETANLDGETNLKIKQALPETAGLLKPVELGQ 322
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
+ G ++ P+ ++ FD L+LLP D ++ PL+ +L+ LRNT W G+ V+T
Sbjct: 323 LSGEVKSEQPNNNLYTFDATLKLLPS--DREL-PLSPDQLLLRGAQLRNTPWVYGIVVFT 379
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTA--GNVWKDTEARKQW 299
G+E+KL K T+V+ ++ + +F+ I V + ++ + +
Sbjct: 380 GHESKLMKNTTETPIKRTSVEKQVN--SQILFLLCIFVFLCFASSLGALIHRSVYGSALS 437
Query: 300 YVLYPQEFP--WYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPET 357
YV Y +++ L L F +L S ++PIS+ V+ +LV+ + A+ I D +M + ET
Sbjct: 438 YVKYTSNRAGMFFKGL---LTFWILYSNLVPISLFVTFELVRYIQAQLISSDLDMYNEET 494
Query: 358 DTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN------------ 405
DTP+ +++ E+L QV YI +DKTGTLT N+M FR+C I G+ Y +
Sbjct: 495 DTPAACRTSSLVEELGQVGYIFSDKTGTLTRNQMEFRQCTIAGVAYADVIPEDRQFTSED 554
Query: 406 -ETGDALKDVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKA-GAILYKAQSQDEE 460
++ + D L S + + +FL V+++C+TVIP ++ +I Y+A S DE
Sbjct: 555 LDSDMYIYDFDTLKENLKHSENASLIHQFLLVLSICHTVIPEYDESTNSIKYQASSPDEG 614
Query: 461 ALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNIS 520
ALV AA + + + ++ + G YE+L EF S RKRMS+V + C G I
Sbjct: 615 ALVKGAASIGYKFLARKPHLVTVSIFGKDESYELLHICEFNSTRKRMSIVFR-CPDGKIR 673
Query: 521 LLSKGADEAILP-YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKE 579
L KGAD I+ A +T + +E Y+ +GLRTLC+A REV EDEYQ WS +F+
Sbjct: 674 LYVKGADTVIMERLASDNPYLQTTIHHLEDYATVGLRTLCIAMREVPEDEYQRWSTVFET 733
Query: 580 ASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDK 639
A+S+L+DR ++ + + +E DL +LG TAIEDRLQDGVP+TI TL+ AGI W+LTGD+
Sbjct: 734 AASSLVDRAQKLMDAAEEIEKDLILLGATAIEDRLQDGVPDTISTLQTAGIKIWVLTGDR 793
Query: 640 QNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTM---RITTSEPKDVAFV 696
Q TAI I +SC I E G L+ ++ +T++ S+ L ++ TT + +A V
Sbjct: 794 QETAINIGMSCKLID-EDMG-LVIVNEETKEATAESVMAKLSSIYRNEATTGNVESMALV 851
Query: 697 VDGWALEIALK-HYRKAFTELAILSRTAICCRVTPSQKAQLVELLK-SCDYRTLAIGDGG 754
+DG +L AL + F ELA L R ICCRV+P QKA +V+++K + LAIGDG
Sbjct: 852 IDGVSLTYALDFSLERRFFELASLCRAVICCRVSPLQKALIVKMVKRNTGEVLLAIGDGA 911
Query: 755 NDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSF 814
NDV MIQ A +GVGISG EGLQA R++D+SI +F +LK+L+LVHG + Y R + L YSF
Sbjct: 912 NDVPMIQAAHVGVGISGMEGLQAVRSSDFSISQFCYLKKLLLVHGSWCYQRLSKLILYSF 971
Query: 815 YKSLLICFIQI 825
YK++ + Q
Sbjct: 972 YKNIALYMTQF 982
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of phospholipids. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9NTI2|AT8A2_HUMAN Probable phospholipid-transporting ATPase IB OS=Homo sapiens GN=ATP8A2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 536 bits (1382), Expect = e-151, Method: Compositional matrix adjust.
Identities = 326/856 (38%), Positives = 486/856 (56%), Gaps = 50/856 (5%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R IY+N ++ + N++S KY+++ FLP+ L+EQ R N +FL IA LQ ++
Sbjct: 16 RTIYLNQPHLNK--FRDNQISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQQIPDVS 73
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PLI I ++ KE +D+ R+ +D N+K+ V++ G+ I +++ VG
Sbjct: 74 PTGRYTTLVPLIIILTIAGIKEIVEDFKRHKADNAVNKKKTIVLRNGMWHTIMWKEVAVG 133
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDF-ELLHK 181
+IV + +P D+VL+ +S+PQ +CYVETA LDGET+LK R + M E+L K
Sbjct: 134 DIVKVVNGQYLPADVVLLSSSEPQAMCYVETANLDGETNLKIRQGLSHTADMQTREVLMK 193
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
+ G IEC GP++ + F GNL L + L +L+ LRNT+W G+ VYT
Sbjct: 194 LSGTIECEGPNRHLYDFTGNLNL----DGKSLVALGPDQILLRGTQLRNTQWVFGIVVYT 249
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYV 301
G++TKL K + V+ + + +F +V+ +V W + K WY+
Sbjct: 250 GHDTKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSAGALYWNRSHGEKNWYI 309
Query: 302 ----LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPET 357
F Y LL F +L + +IPIS+ V+L++VK A FI+WD +M
Sbjct: 310 KKMDTTSDNFG-YNLLT----FIILYNNLIPISLLVTLEVVKYTQALFINWDTDMYYIGN 364
Query: 358 DTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN------------ 405
DTP+ A + ++E+L QV+Y+ +DKTGTLT N M F++C I G+ YG+
Sbjct: 365 DTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSIAGVTYGHFPELAREPSSDD 424
Query: 406 ------ETGDA--LKDVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKA 454
D+ D LL I P + FLT++AVC+TV+P K I+Y+A
Sbjct: 425 FCRMPPPCSDSCDFDDPRLLKNIEDRHPTAPCIQEFLTLLAVCHTVVPEKD-GDNIIYQA 483
Query: 455 QSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDC 514
S DE ALV A +L V + + I+ G + IL LEF+SDRKRMSV+V+
Sbjct: 484 SSPDEAALVKGAKKLGFVFTARTPFSVIIEAMGQEQTFGILNVLEFSSDRKRMSVIVR-T 542
Query: 515 HSGNISLLSKGADEAILPYAHAGQQTRTFVEA---VEQYSQLGLRTLCLAWREVEEDEYQ 571
SG + L KGAD I + + ++ E +E ++ GLRTLC+A+ ++ E+EY+
Sbjct: 543 PSGRLRLYCKGADNVI--FERLSKDSKYMEETLCHLEYFATEGLRTLCVAYADLSENEYE 600
Query: 572 EWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGIN 631
EW +++EAS+ L DR R+ E + +E +L +LG TAIEDRLQ GVPETI TL KA I
Sbjct: 601 EWLKVYQEASTILKDRAQRLEECYEIIEKNLLLLGATAIEDRLQAGVPETIATLLKAEIK 660
Query: 632 FWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691
W+LTGDKQ TAI I SC +S LL D + D ++ + + +
Sbjct: 661 IWVLTGDKQETAINIGYSCRLVSQNMALILLKED--SLDATRAAITQHCTDLGNLLGKEN 718
Query: 692 DVAFVVDGWALEIALK-HYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLA 749
DVA ++DG L+ AL R++F +LA+ + ICCRV+P QK+++V+++K TLA
Sbjct: 719 DVALIIDGHTLKYALSFEVRRSFLDLALSCKAVICCRVSPLQKSEIVDVVKKRVKAITLA 778
Query: 750 IGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFL 809
IGDG NDV MIQ A +GVGISG EG+QA +DY+I +F +L++L+LVHG +SYNR
Sbjct: 779 IGDGANDVGMIQTAHVGVGISGNEGMQATNNSDYAIAQFSYLEKLLLVHGAWSYNRVTKC 838
Query: 810 SQYSFYKSLLICFIQI 825
Y FYK++++ I++
Sbjct: 839 ILYCFYKNVVLYIIEL 854
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P39524|ATC3_YEAST Probable phospholipid-transporting ATPase DRS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DRS2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 530 bits (1366), Expect = e-149, Method: Compositional matrix adjust.
Identities = 324/857 (37%), Positives = 491/857 (57%), Gaps = 46/857 (5%)
Query: 3 RYIYINDDETSQDL-YCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLI 61
R I+IND + Y N +S KY FLPK L+++FS++ N +FL + +Q +
Sbjct: 183 RVIHINDSLANSSFGYSDNHISTTKYNFATFLPKFLFQEFSKYANLFFLCTSAIQQVPHV 242
Query: 62 TPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQ--DI 119
+P N +T G L+ + VSA KE +D R SDK+ N + + ++ + DI
Sbjct: 243 SPTNRYTTIGTLLVVLIVSAMKECIEDIKRANSDKELNNSTAEIFSEAHDDFVEKRWIDI 302
Query: 120 RVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLK---TRLIPAACMGMDF 176
RVG+I+ ++ + +P D +++ +S+P+G+CY+ETA LDGET+LK +R+ A + D
Sbjct: 303 RVGDIIRVKSEEPIPADTIILSSSEPEGLCYIETANLDGETNLKIKQSRVETAKFI--DV 360
Query: 177 ELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACG 236
+ L + G + P+ + ++G + L ++ PL+ IL+ LRNT W G
Sbjct: 361 KTLKNMNGKVVSEQPNSSLYTYEGTMTL-----NDRQIPLSPDQMILRGATLRNTAWIFG 415
Query: 237 VAVYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEAR 296
+ ++TG+ETKL K TAV+ +I++ A+F ++V+I++ + GNV T
Sbjct: 416 LVIFTGHETKLLRNATATPIKRTAVEKIINRQIIALFTV-LIVLILISSIGNVIMSTADA 474
Query: 297 KQWYVLYPQEFPWYELLVIP-LRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDP 355
K LY + L L F +L S ++PIS+ V+++L+K A I D ++
Sbjct: 475 KHLSYLYLEGTNKAGLFFKDFLTFWILFSNLVPISLFVTVELIKYYQAFMIGSDLDLYYE 534
Query: 356 ETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFY------------ 403
+TDTP+ +++ E+L Q+EYI +DKTGTLT N M F+ C I G Y
Sbjct: 535 KTDTPTVVRTSSLVEELGQIEYIFSDKTGTLTRNIMEFKSCSIAGHCYIDKIPEDKTATV 594
Query: 404 --GNETG----DALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQ 457
G E G D LK L + SP + FLT++A C+TVIP G+I Y+A S
Sbjct: 595 EDGIEVGYRKFDDLKK-KLNDPSDEDSPIINDFLTLLATCHTVIPEFQSDGSIKYQAASP 653
Query: 458 DEEALVHAAAQL--HMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCH 515
DE ALV A L ++ N+ + ++ G +Y++L EF S RKRMS + +
Sbjct: 654 DEGALVQGGADLGYKFIIRKPNSVTVLLEETGEEKEYQLLNICEFNSTRKRMSAIFR-FP 712
Query: 516 SGNISLLSKGADEAILPYA--HAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEW 573
G+I L KGAD IL A Q + +E Y+ GLRTLCLA R++ E EY+EW
Sbjct: 713 DGSIKLFCKGADTVILERLDDEANQYVEATMRHLEDYASEGLRTLCLAMRDISEGEYEEW 772
Query: 574 SLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFW 633
+ ++ EA++TL +R ++ E +E +L ++G TAIED+LQDGVPETI TL++AGI W
Sbjct: 773 NSIYNEAATTLDNRAEKLDEAANLIEKNLILIGATAIEDKLQDGVPETIHTLQEAGIKIW 832
Query: 634 MLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRS-LERV--LLTMRITTSEP 690
+LTGD+Q TAI I +SC +S + LL I+ +T D+ R+ LE++ L +++T +
Sbjct: 833 VLTGDRQETAINIGMSCRLLSEDM--NLLIINEETRDDTERNLLEKINALNEHQLSTHDM 890
Query: 691 KDVAFVVDGWALEIALK-HYRKAFTELAILSRTAICCRVTPSQKAQLVELLK-SCDYRTL 748
+A V+DG +L AL+ +A L + ICCRV+P QKA +V+++K L
Sbjct: 891 NTLALVIDGKSLGFALEPELEDYLLTVAKLCKAVICCRVSPLQKALVVKMVKRKSSSLLL 950
Query: 749 AIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAF 808
AIGDG NDV MIQ A +GVGISG EG+QAAR+AD ++G+F+FLK+L+LVHG +SY R +
Sbjct: 951 AIGDGANDVSMIQAAHVGVGISGMEGMQAARSADIAVGQFKFLKKLLLVHGSWSYQRISV 1010
Query: 809 LSQYSFYKSLLICFIQI 825
YSFYK+ + Q
Sbjct: 1011 AILYSFYKNTALYMTQF 1027
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of phospholipids (Potential). Seems to be involved in ribosome assembly. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q8TF62|AT8B4_HUMAN Probable phospholipid-transporting ATPase IM OS=Homo sapiens GN=ATP8B4 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 529 bits (1362), Expect = e-149, Method: Compositional matrix adjust.
Identities = 315/888 (35%), Positives = 491/888 (55%), Gaps = 73/888 (8%)
Query: 1 MKRYIYINDDETSQDL-YCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWS 59
++R + ND E ++ Y NR+ KY ++ FLP NL+EQF R N YFL + LQL
Sbjct: 11 VERIVKANDREYNEKFQYADNRIHTSKYNILTFLPINLFEQFQRVANAYFLCLLILQLIP 70
Query: 60 LITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDI 119
I+ + +T PL+ + ++A K+A DDY R+ SD + N ++ V+ + + ++
Sbjct: 71 EISSLTWFTTIVPLVLVITMTAVKDATDDYFRHKSDNQVNNRQSEVLINSKLQNEKWMNV 130
Query: 120 RVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR--LIPAACMGMDFE 177
+VG+I+ L N V DL+L+ +S+P G+CYVETA LDGET+LK R L + +G D
Sbjct: 131 KVGDIIKLENNQFVAADLLLLSSSEPHGLCYVETAELDGETNLKVRHALSVTSELGADIS 190
Query: 178 LLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGV 237
L G++ C P+ + +F G L + L + IL+ C LRNT W G+
Sbjct: 191 RLAGFDGIVVCEVPNNKLDKFMGILSW-----KDSKHSLNNEKIILRGCILRNTSWCFGM 245
Query: 238 AVYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARK 297
++ G +TKL G + K T++D +++ L IF F I + I+L ++W+ +
Sbjct: 246 VIFAGPDTKLMQNSGKTKFKRTSIDRLMNTLVLWIFGFLICLGIILAIGNSIWESQTGDQ 305
Query: 298 QWYVLYPQEFPWYELLVIPLRFE---LLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMID 354
L+ E + L F ++ + ++PIS+ VS+++++ ++ FI+WD +M
Sbjct: 306 FRTFLFWNEGEKSSVFSGFLTFWSYIIILNTVVPISLYVSVEVIRLGHSYFINWDRKMYY 365
Query: 355 PETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALK-- 412
P+ A T ++E+L Q+EYI +DKTGTLT+N M F+RC I G YG E D L
Sbjct: 366 SRKAIPAVARTTTLNEELGQIEYIFSDKTGTLTQNIMTFKRCSINGRIYG-EVHDDLDQK 424
Query: 413 -------------------------DVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKA 447
D L+ +I G P V FL ++A+C+TV+ ++ A
Sbjct: 425 TEITQEKEPVDFSVKSQADREFQFFDHHLMESIKMGDPKVHEFLRLLALCHTVMSEENSA 484
Query: 448 GAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRM 507
G ++Y+ QS DE ALV AA + ++ + I+ G+++ Y++L L+F + RKRM
Sbjct: 485 GELIYQVQSPDEGALVTAARNFGFIFKSRTPETITIEELGTLVTYQLLAFLDFNNTRKRM 544
Query: 508 SVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFV--EAVEQYSQLGLRTLCLAWREV 565
SV+V++ G I L SKGAD + H + + + + +++ GLRTL +A+R++
Sbjct: 545 SVIVRN-PEGQIKLYSKGADTILFEKLHPSNEVLLSLTSDHLSEFAGEGLRTLAIAYRDL 603
Query: 566 EEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETL 625
++ ++EW M ++A++ +R+ RIA + + +E DL +LG TA+ED+LQ+GV ET+ +L
Sbjct: 604 DDKYFKEWHKMLEDANAATEERDERIAGLYEEIERDLMLLGATAVEDKLQEGVIETVTSL 663
Query: 626 RKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDE-------------- 671
A I W+LTGDKQ TAI I +CN ++ + + I G E
Sbjct: 664 SLANIKIWVLTGDKQETAINIGYACNMLT-DDMNDVFVIAGNNAVEVREELRKAKQNLFG 722
Query: 672 ----------VCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH-YRKAFTELAILS 720
VC +++ L + + D A +++G +L AL+ + ELA +
Sbjct: 723 QNRNFSNGHVVCEKKQQLELDSIVEETITGDYALIINGHSLAHALESDVKNDLLELACMC 782
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYR---TLAIGDGGNDVRMIQKADIGVGISGREGLQA 777
+T ICCRVTP QKAQ+VEL+K YR TLAIGDG NDV MI+ A IGVGISG+EGLQA
Sbjct: 783 KTVICCRVTPLQKAQVVELVKK--YRNAVTLAIGDGANDVSMIKSAHIGVGISGQEGLQA 840
Query: 778 ARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825
A+DYS +FR+L+RL+LVHGR+SY R Y FYK+ +
Sbjct: 841 VLASDYSFAQFRYLQRLLLVHGRWSYFRMCKFLCYFFYKNFAFTLVHF 888
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9Y2G3|AT11B_HUMAN Probable phospholipid-transporting ATPase IF OS=Homo sapiens GN=ATP11B PE=1 SV=2 | Back alignment and function description |
|---|
Score = 523 bits (1347), Expect = e-147, Method: Compositional matrix adjust.
Identities = 327/890 (36%), Positives = 497/890 (55%), Gaps = 88/890 (9%)
Query: 3 RYIYINDDETSQDLYCA-----NRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQL 57
R IY+ + LY NR+ + KYT+ NF+PKNL+EQF R N YFL+I +QL
Sbjct: 20 RTIYVANRFPQNGLYTPQKFIDNRIISSKYTVWNFVPKNLFEQFRRVANFYFLIIFLVQL 79
Query: 58 WSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQ 117
+ TP +P ++ PL F+ V+A K+ ++D+ R+ SD + N V+VV+ G +S+
Sbjct: 80 M-IDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHNSDNEVNGAPVYVVRSGGLVKTRSK 138
Query: 118 DIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL-IPAACMGMDF 176
+IRVG+IV + +++ P DLVL+ + G C+V TA+LDGET+LKT + +P +
Sbjct: 139 NIRVGDIVRIAKDEIFPADLVLLSSDRLDGSCHVTTASLDGETNLKTHVAVPETALLQTV 198
Query: 177 ELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACG 236
L + VIEC P+ D+ RF G + ++ ++ V PL ++ +L+ L+NT+ G
Sbjct: 199 ANLDTLVAVIECQQPEADLYRFMGRM-IITQQMEEIVRPLGPESLLLRGARLKNTKEIFG 257
Query: 237 VAVYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDT-EA 295
VAVYTG ETK+ + K +AV+ K + +V++I + K T +A
Sbjct: 258 VAVYTGMETKMALNYKSKSQKRSAVE----KSMNTFLIIYLVILISEAVISTILKYTWQA 313
Query: 296 RKQWYVLYPQEFPWY--------------ELLVIPLRFELLCSIMIPISIKVSLDLVKSL 341
++W + PWY + L F +L + +IPIS+ V++++ K L
Sbjct: 314 EEKW------DEPWYNQKTEHQRNSSKILRFISDFLAFLVLYNFIIPISLYVTVEMQKFL 367
Query: 342 YAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGI 401
+ FI WD ++ E+D + + ++E+L QVEY+ TDKTGTLTEN M FR C I G+
Sbjct: 368 GSFFIGWDLDLYHEESDQKAQVNTSDLNEELGQVEYVFTDKTGTLTENEMQFRECSINGM 427
Query: 402 FYGNETGDALKD-------------------VGLLNAITSGSP---------DVIR---- 429
Y G + + + L+ +T+ S ++I+
Sbjct: 428 KYQEINGRLVPEGPTPDSSEGNLSYLSSLSHLNNLSHLTTSSSFRTSPENETELIKEHDL 487
Query: 430 FLTVMAVCNTVI------------PAKSK--AGAILYKAQSQDEEALVHAAAQLHMVLVN 475
F +++C+TV P +S + Y A S DE+ALV AAA++ +V +
Sbjct: 488 FFKAVSLCHTVQISNVQTDCTGDGPWQSNLAPSQLEYYASSPDEKALVEAAARIGIVFIG 547
Query: 476 KNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAH 535
+ +E+K G + +Y++L LEF SDR+RMSV+V+ SG L +KGA+ +ILP
Sbjct: 548 NSEETMEVKTLGKLERYKLLHILEFDSDRRRMSVIVQ-APSGEKLLFAKGAESSILPKCI 606
Query: 536 AGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVC 595
G+ +T + V++++ GLRTLC+A+R+ EY+E EA + L RE ++A V
Sbjct: 607 GGEIEKTRIH-VDEFALKGLRTLCIAYRKFTSKEYEEIDKRIFEARTALQQREEKLAAVF 665
Query: 596 QRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP 655
Q +E DL +LG TA+EDRLQD V ETIE LR AGI W+LTGDK TA+ ++LSC
Sbjct: 666 QFIEKDLILLGATAVEDRLQDKVRETIEALRMAGIKVWVLTGDKHETAVSVSLSCGHFH- 724
Query: 656 EPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTE 715
L I+ K++ E L + L RIT VVDG +L +AL+ + K F E
Sbjct: 725 RTMNILELINQKSDSECAEQLRQ--LARRITEDHVIQHGLVVDGTSLSLALREHEKLFME 782
Query: 716 LAILSRTAICCRVTPSQKAQLVELLKSCDYR--TLAIGDGGNDVRMIQKADIGVGISGRE 773
+ +CCR+ P QKA+++ L+K + TLA+GDG NDV MIQ+A +G+GI G+E
Sbjct: 783 VCRNCSAVLCCRMAPLQKAKVIRLIKISPEKPITLAVGDGANDVSMIQEAHVGIGIMGKE 842
Query: 774 GLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFI 823
G QAAR +DY+I +F+FL +L+ VHG + Y R A L QY FYK+ +CFI
Sbjct: 843 GRQAARNSDYAIARFKFLSKLLFVHGHFYYIRIATLVQYFFYKN--VCFI 890
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 826 | ||||||
| 356543847 | 1107 | PREDICTED: phospholipid-transporting ATP | 1.0 | 0.746 | 0.881 | 0.0 | |
| 356549902 | 1106 | PREDICTED: phospholipid-transporting ATP | 1.0 | 0.746 | 0.881 | 0.0 | |
| 225446426 | 1105 | PREDICTED: phospholipid-transporting ATP | 1.0 | 0.747 | 0.901 | 0.0 | |
| 302143322 | 1135 | unnamed protein product [Vitis vinifera] | 1.0 | 0.727 | 0.870 | 0.0 | |
| 224132912 | 1107 | aminophospholipid ATPase [Populus tricho | 1.0 | 0.746 | 0.882 | 0.0 | |
| 334188194 | 1107 | phospholipid-translocating ATPase [Arabi | 1.0 | 0.746 | 0.875 | 0.0 | |
| 334188192 | 1139 | phospholipid-translocating ATPase [Arabi | 1.0 | 0.725 | 0.872 | 0.0 | |
| 297794981 | 1096 | hypothetical protein ARALYDRAFT_356659 [ | 1.0 | 0.753 | 0.874 | 0.0 | |
| 449478968 | 1103 | PREDICTED: LOW QUALITY PROTEIN: phosphol | 0.998 | 0.747 | 0.871 | 0.0 | |
| 449438125 | 1112 | PREDICTED: LOW QUALITY PROTEIN: phosphol | 0.998 | 0.741 | 0.863 | 0.0 |
| >gi|356543847|ref|XP_003540371.1| PREDICTED: phospholipid-transporting ATPase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1550 bits (4012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 728/826 (88%), Positives = 785/826 (95%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YI+DDE+S D+YC NR+SNRKYT++NFLPKNLWEQFSRFMNQYFLLIACLQLW L
Sbjct: 1 MKRYVYIDDDESSHDIYCDNRISNRKYTVLNFLPKNLWEQFSRFMNQYFLLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNP STWGPLIFIFAVSA+KEAWDDYNRYLSDKKANEKEVWVVK+GIKK IQ+QD+
Sbjct: 61 ITPVNPVSTWGPLIFIFAVSASKEAWDDYNRYLSDKKANEKEVWVVKKGIKKHIQAQDVH 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVLIGTSDPQGVCY+ETAALDGETDLKTR+IP+ACMG+D +LLH
Sbjct: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYIETAALDGETDLKTRVIPSACMGIDVDLLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
KIKGVIECP PDKDIRRFD N+RL PPFIDND+CPLTIKNTILQSCYLRNTEWACGVAVY
Sbjct: 181 KIKGVIECPYPDKDIRRFDANMRLFPPFIDNDICPLTIKNTILQSCYLRNTEWACGVAVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGNETK+GM RGIPEPKLTA+DAMIDKLTGAIF+FQIVVV+VLG AGNVWKDTEA+K WY
Sbjct: 241 TGNETKMGMCRGIPEPKLTAMDAMIDKLTGAIFIFQIVVVLVLGIAGNVWKDTEAKKLWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
VLYP E PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWD++MID ET P
Sbjct: 301 VLYPHEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDHQMIDLETSIP 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
SHATNTAISEDL QVEYILTDKTGTLTEN+MIFRRCCI G FYGNE GDALKDV LLNA+
Sbjct: 361 SHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCISGNFYGNENGDALKDVELLNAV 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
+SGS DV+RFLTVMA+CNTVIP +SK G ILYKAQSQDE+ALVHAA++LHMV NK+ +I
Sbjct: 421 SSGSSDVVRFLTVMAICNTVIPTQSKTGDILYKAQSQDEDALVHAASRLHMVYFNKSGNI 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LE+KF+ S+LQYE+LETLEFTSDRKRMSVV+KDC +G I LLSKGADEAILPYA AGQQT
Sbjct: 481 LEVKFSTSILQYEVLETLEFTSDRKRMSVVLKDCQNGKILLLSKGADEAILPYARAGQQT 540
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
R F+EAVEQY+ LGLRTLCLAWRE++ DEY+EWSLMFKEASSTL+DREWR+AEVCQR+EH
Sbjct: 541 RHFIEAVEQYAHLGLRTLCLAWRELKRDEYREWSLMFKEASSTLVDREWRVAEVCQRVEH 600
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
DL++LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLEILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LLSIDGKTE+EVCRSLERVL TMRITTSEPKDVAFVVDGWALEIAL HYRKAFTELA+LS
Sbjct: 661 LLSIDGKTEEEVCRSLERVLRTMRITTSEPKDVAFVVDGWALEIALTHYRKAFTELAVLS 720
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTAICCRVTPSQKAQLV++LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIL 826
ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI
Sbjct: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIF 826
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356549902|ref|XP_003543329.1| PREDICTED: phospholipid-transporting ATPase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1548 bits (4007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 728/826 (88%), Positives = 785/826 (95%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YI+DDE+S D+YC NR+SNRKYT++NFLPKNLWEQFSRFMNQYFLLIACLQLW L
Sbjct: 1 MKRYVYIDDDESSHDIYCDNRISNRKYTVLNFLPKNLWEQFSRFMNQYFLLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNP STWGPLIFIFAVSA+KEAWDDYNRYLSD KANEKEVWVVK+GIKK IQ+QDI
Sbjct: 61 ITPVNPVSTWGPLIFIFAVSASKEAWDDYNRYLSDNKANEKEVWVVKKGIKKHIQAQDIH 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVLIGTSDPQGVCY+ETAALDGETDLKTR+IP+AC+G+D +LLH
Sbjct: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYIETAALDGETDLKTRVIPSACVGIDVDLLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
KIKGVIECP PDKDIRRFD N+RL PPFIDND+CPLTIKNTILQSCYLRNTEWACGVAVY
Sbjct: 181 KIKGVIECPYPDKDIRRFDANMRLFPPFIDNDICPLTIKNTILQSCYLRNTEWACGVAVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGNETK+GM RGIPEPKLTA+DAMIDKLTGAIF+FQIVVV+VLG AGNVWKDTEA+K WY
Sbjct: 241 TGNETKMGMCRGIPEPKLTAMDAMIDKLTGAIFIFQIVVVLVLGIAGNVWKDTEAKKLWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
VLYP E PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWD++MID ET P
Sbjct: 301 VLYPHEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDHQMIDLETSIP 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
SHATNTAISEDL QVEYILTDKTGTLTEN+MIFRRCCI G FYGNE GDALKDV LLNA+
Sbjct: 361 SHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCISGNFYGNENGDALKDVELLNAV 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
+SGS DV+RFLTVMA+CNTVIP +SK G ILYKAQSQDE+ALVHAAA+LHMV NK+ +I
Sbjct: 421 SSGSSDVVRFLTVMAICNTVIPTQSKTGDILYKAQSQDEDALVHAAARLHMVYFNKSGNI 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LE+KFN S+LQYE+LETLEFTSDRKRMSVV+KDC +G I LLSKGADEAILPYAHAG+QT
Sbjct: 481 LEVKFNTSILQYEVLETLEFTSDRKRMSVVLKDCQNGKILLLSKGADEAILPYAHAGKQT 540
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
R F+EAVEQY+ LGLRTLCLAWRE++ DEY+EWSLMFKEASSTL+DREWR+AEVCQR+EH
Sbjct: 541 RHFIEAVEQYAHLGLRTLCLAWRELKRDEYREWSLMFKEASSTLVDREWRVAEVCQRVEH 600
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
DL++LGVTAIEDRLQDGVPETI+TLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLEILGVTAIEDRLQDGVPETIKTLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LL IDGKTE+EVCRSLERVL TMRITTSEPKDVAFVVDGWALEIAL HYRKAFTELA+LS
Sbjct: 661 LLLIDGKTEEEVCRSLERVLRTMRITTSEPKDVAFVVDGWALEIALTHYRKAFTELAVLS 720
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTAICCRVTPSQKAQLV++LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIL 826
ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIL
Sbjct: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIL 826
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225446426|ref|XP_002276115.1| PREDICTED: phospholipid-transporting ATPase 2-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1539 bits (3985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 745/826 (90%), Positives = 791/826 (95%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YINDDE SQ+LYC NR+SNRKYTL+NFLPKNLWEQFSRFMNQYFLLIACLQLW L
Sbjct: 1 MKRYVYINDDELSQELYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVV+QGIKK IQ+QDI
Sbjct: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVRQGIKKHIQAQDIC 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGN+VWLREN+EVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR+IP+ACMG+DFELLH
Sbjct: 121 VGNVVWLRENEEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRVIPSACMGIDFELLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD NLRL PPFIDND CPLTIKNTILQSCYLRNTEW CGVAVY
Sbjct: 181 KMKGVIECPIPDKDIRRFDANLRLFPPFIDNDFCPLTIKNTILQSCYLRNTEWVCGVAVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGNETKLGM+RGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLG AGNVWKDTEA KQWY
Sbjct: 241 TGNETKLGMSRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGIAGNVWKDTEAVKQWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
VLYP++ PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWD +MID ET TP
Sbjct: 301 VLYPKKGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDNQMIDQETSTP 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
SHATNTAISEDL QVEYILTDKTGTLTEN MIFRRCCIGGIFYGNE+GDALKDV LLNA+
Sbjct: 361 SHATNTAISEDLGQVEYILTDKTGTLTENIMIFRRCCIGGIFYGNESGDALKDVELLNAV 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
+SGSPDVI+FLTVMA+CNTVIP KSK GAI YKAQSQDE+ALV AAA+LHMV VNKNA+
Sbjct: 421 SSGSPDVIQFLTVMALCNTVIPVKSKTGAISYKAQSQDEDALVQAAARLHMVFVNKNANT 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LEI FN S++QYE+L+TLEFTSDRKRMSVVVKDC +G I LLSKGADEAI+PYA AGQQT
Sbjct: 481 LEINFNASIIQYEVLDTLEFTSDRKRMSVVVKDCQNGKIFLLSKGADEAIIPYACAGQQT 540
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
RTF EAVEQYSQLGLRTLCLAWRE++EDEY++WSLMFKEA+STL+DREWR+AEVCQRLEH
Sbjct: 541 RTFTEAVEQYSQLGLRTLCLAWRELKEDEYRDWSLMFKEANSTLVDREWRLAEVCQRLEH 600
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
DL++LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLEILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LL I+GKTEDEV RSL+RVLLTMRITTSEPKDVAFV+DGWALEIALKHYRKAFT+LAILS
Sbjct: 661 LLLINGKTEDEVGRSLDRVLLTMRITTSEPKDVAFVIDGWALEIALKHYRKAFTDLAILS 720
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTA+CCRVTPSQKAQLVE+LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTALCCRVTPSQKAQLVEILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIL 826
ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI
Sbjct: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIF 826
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302143322|emb|CBI21883.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1526 bits (3951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 745/856 (87%), Positives = 791/856 (92%), Gaps = 30/856 (3%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YINDDE SQ+LYC NR+SNRKYTL+NFLPKNLWEQFSRFMNQYFLLIACLQLW L
Sbjct: 1 MKRYVYINDDELSQELYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVV+QGIKK IQ+QDI
Sbjct: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVRQGIKKHIQAQDIC 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGN+VWLREN+EVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR+IP+ACMG+DFELLH
Sbjct: 121 VGNVVWLRENEEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRVIPSACMGIDFELLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD NLRL PPFIDND CPLTIKNTILQSCYLRNTEW CGVAVY
Sbjct: 181 KMKGVIECPIPDKDIRRFDANLRLFPPFIDNDFCPLTIKNTILQSCYLRNTEWVCGVAVY 240
Query: 241 TG------------------------------NETKLGMTRGIPEPKLTAVDAMIDKLTG 270
TG NETKLGM+RGIPEPKLTAVDAMIDKLTG
Sbjct: 241 TGKDTRALLNNGRVLFGGSFQVFLLKAFDCLRNETKLGMSRGIPEPKLTAVDAMIDKLTG 300
Query: 271 AIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPIS 330
AIFVFQIVVVIVLG AGNVWKDTEA KQWYVLYP++ PWYELLVIPLRFELLCSIMIPIS
Sbjct: 301 AIFVFQIVVVIVLGIAGNVWKDTEAVKQWYVLYPKKGPWYELLVIPLRFELLCSIMIPIS 360
Query: 331 IKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENR 390
IKVSLDLVKSLYAKFIDWD +MID ET TPSHATNTAISEDL QVEYILTDKTGTLTEN
Sbjct: 361 IKVSLDLVKSLYAKFIDWDNQMIDQETSTPSHATNTAISEDLGQVEYILTDKTGTLTENI 420
Query: 391 MIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAI 450
MIFRRCCIGGIFYGNE+GDALKDV LLNA++SGSPDVI+FLTVMA+CNTVIP KSK GAI
Sbjct: 421 MIFRRCCIGGIFYGNESGDALKDVELLNAVSSGSPDVIQFLTVMALCNTVIPVKSKTGAI 480
Query: 451 LYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVV 510
YKAQSQDE+ALV AAA+LHMV VNKNA+ LEI FN S++QYE+L+TLEFTSDRKRMSVV
Sbjct: 481 SYKAQSQDEDALVQAAARLHMVFVNKNANTLEINFNASIIQYEVLDTLEFTSDRKRMSVV 540
Query: 511 VKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEY 570
VKDC +G I LLSKGADEAI+PYA AGQQTRTF EAVEQYSQLGLRTLCLAWRE++EDEY
Sbjct: 541 VKDCQNGKIFLLSKGADEAIIPYACAGQQTRTFTEAVEQYSQLGLRTLCLAWRELKEDEY 600
Query: 571 QEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGI 630
++WSLMFKEA+STL+DREWR+AEVCQRLEHDL++LGVTAIEDRLQDGVPETIETLRKAGI
Sbjct: 601 RDWSLMFKEANSTLVDREWRLAEVCQRLEHDLEILGVTAIEDRLQDGVPETIETLRKAGI 660
Query: 631 NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690
NFWMLTGDKQNTAIQIALSCNFISPEPKGQLL I+GKTEDEV RSL+RVLLTMRITTSEP
Sbjct: 661 NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLLINGKTEDEVGRSLDRVLLTMRITTSEP 720
Query: 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAI 750
KDVAFV+DGWALEIALKHYRKAFT+LAILSRTA+CCRVTPSQKAQLVE+LKSCDYRTLAI
Sbjct: 721 KDVAFVIDGWALEIALKHYRKAFTDLAILSRTALCCRVTPSQKAQLVEILKSCDYRTLAI 780
Query: 751 GDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLS 810
GDGGNDVRMIQ+ADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLS
Sbjct: 781 GDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLS 840
Query: 811 QYSFYKSLLICFIQIL 826
QYSFYKSLLICFIQI
Sbjct: 841 QYSFYKSLLICFIQIF 856
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224132912|ref|XP_002327910.1| aminophospholipid ATPase [Populus trichocarpa] gi|222837319|gb|EEE75698.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1524 bits (3946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 731/828 (88%), Positives = 779/828 (94%), Gaps = 2/828 (0%)
Query: 1 MKRYIYINDDETS--QDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLW 58
MKR++YINDDE+S DLYC NR+SNRKYTL+NFLPKNL EQFSRFMNQYFLLIACLQLW
Sbjct: 1 MKRFVYINDDESSPTHDLYCDNRISNRKYTLLNFLPKNLMEQFSRFMNQYFLLIACLQLW 60
Query: 59 SLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQD 118
SLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEK+VW+V++GIKK IQ+QD
Sbjct: 61 SLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKQVWIVRKGIKKHIQAQD 120
Query: 119 IRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFEL 178
I VGN+VWLRENDEVPCDLVLIGTSDPQG+CY+ETAALDGE DLKTR+ P+ACMG+DFEL
Sbjct: 121 ICVGNLVWLRENDEVPCDLVLIGTSDPQGLCYIETAALDGEIDLKTRVTPSACMGIDFEL 180
Query: 179 LHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVA 238
LHKIKGVIECP PDKDIRR D NLRL PPFIDNDVCPLTIKNTILQSCYLRNTEWACGVA
Sbjct: 181 LHKIKGVIECPNPDKDIRRLDANLRLFPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVA 240
Query: 239 VYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQ 298
VYTGNETKLGM+RGIPEPKLTA+DAMIDKLTGAIFVFQIVVV+VLG AGNVWKDTEARK
Sbjct: 241 VYTGNETKLGMSRGIPEPKLTALDAMIDKLTGAIFVFQIVVVMVLGIAGNVWKDTEARKL 300
Query: 299 WYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETD 358
WYVLYP E PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWD EMID ET+
Sbjct: 301 WYVLYPDEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDREMIDLETE 360
Query: 359 TPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLN 418
TPSHATNTAISEDL QVEYILTDKTGTLTEN+M+FR CCI G FYGNE GDA KD LLN
Sbjct: 361 TPSHATNTAISEDLGQVEYILTDKTGTLTENKMVFRICCISGNFYGNEAGDASKDKQLLN 420
Query: 419 AITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNA 478
AI+SGSPDV+RFLTVMA+CNTVIP +SK GAILYKAQSQDE+ALVHAAA+L+MVLV KN
Sbjct: 421 AISSGSPDVVRFLTVMAICNTVIPVQSKTGAILYKAQSQDEDALVHAAAKLNMVLVCKNG 480
Query: 479 SILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQ 538
+ILE++FN S +QYE+LETLEFTSDRKRMSVVV+DC +G I LLSKGADEAILPYA GQ
Sbjct: 481 NILELRFNTSAIQYEVLETLEFTSDRKRMSVVVRDCQNGKILLLSKGADEAILPYASPGQ 540
Query: 539 QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRL 598
QTR F EAVEQYSQLGLRTLCLAWRE++EDEY+EWS MF+EASSTL+DREWRIAEVCQRL
Sbjct: 541 QTRIFNEAVEQYSQLGLRTLCLAWRELKEDEYEEWSFMFREASSTLVDREWRIAEVCQRL 600
Query: 599 EHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPK 658
E DL+VLGVTAIEDRLQDGVPETI TLRKAGI+FWMLTGDKQNTAIQIALSCNFISPEPK
Sbjct: 601 ERDLEVLGVTAIEDRLQDGVPETIYTLRKAGIHFWMLTGDKQNTAIQIALSCNFISPEPK 660
Query: 659 GQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAI 718
GQLL IDGKTE+EV RSLERVLLTMR T SEPKDVAFVVDGWALEIALKHY KAFTELAI
Sbjct: 661 GQLLLIDGKTEEEVGRSLERVLLTMRTTASEPKDVAFVVDGWALEIALKHYWKAFTELAI 720
Query: 719 LSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 778
LSRTAICCRVTPSQKAQLV++LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAA
Sbjct: 721 LSRTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAA 780
Query: 779 RAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIL 826
RAADYSIG+FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI
Sbjct: 781 RAADYSIGRFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIF 828
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334188194|ref|NP_001190471.1| phospholipid-translocating ATPase [Arabidopsis thaliana] gi|12229647|sp|P98205.1|ALA2_ARATH RecName: Full=Phospholipid-transporting ATPase 2; Short=AtALA2; AltName: Full=Aminophospholipid ATPase 2; AltName: Full=Aminophospholipid flippase 2 gi|332007696|gb|AED95079.1| phospholipid-translocating ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1519 bits (3932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 723/826 (87%), Positives = 778/826 (94%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKR++YINDDE S++L C NR+SNRKYTL NFLPKNLWEQFSRFMNQYFLLIACLQLWSL
Sbjct: 1 MKRFVYINDDEASKELCCDNRISNRKYTLWNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSA+KEAWDDY+RYLSDKKANEKEVW+VKQGIKK IQ+QDI+
Sbjct: 61 ITPVNPASTWGPLIFIFAVSASKEAWDDYHRYLSDKKANEKEVWIVKQGIKKHIQAQDIQ 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVL+GTSDPQGVCYVETAALDGETDLKTR+IP+AC+G+D ELLH
Sbjct: 121 VGNIVWLRENDEVPCDLVLLGTSDPQGVCYVETAALDGETDLKTRVIPSACVGIDLELLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD N+RL PPFIDNDVC LTIKNT+LQSCYLRNTEWACGV+VY
Sbjct: 181 KMKGVIECPVPDKDIRRFDANMRLFPPFIDNDVCSLTIKNTLLQSCYLRNTEWACGVSVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGN+TKLGM+RGI EPKLTA+DAMIDKLTGAIFVFQIVVV+VLG AGNVWKDTEARKQWY
Sbjct: 241 TGNQTKLGMSRGIAEPKLTAMDAMIDKLTGAIFVFQIVVVLVLGIAGNVWKDTEARKQWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
V YP+E PWYELLVIPLRFELLCSIMIPISIKVSLDLVK LYAKFI+WD EMID ET T
Sbjct: 301 VQYPEEAPWYELLVIPLRFELLCSIMIPISIKVSLDLVKGLYAKFIEWDVEMIDQETGTA 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
S+A NTAISEDL QVEYILTDKTGTLT+N+MIFRRCCIGGIFYGNE GDALKD LLNAI
Sbjct: 361 SYAANTAISEDLGQVEYILTDKTGTLTDNKMIFRRCCIGGIFYGNENGDALKDAQLLNAI 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
TSGS DVIRFLTVMA+CNTV+P +SKAG I+YKAQSQDE+ALV AA++LHMV V KNA++
Sbjct: 421 TSGSTDVIRFLTVMAICNTVLPVQSKAGDIVYKAQSQDEDALVIAASKLHMVFVGKNANL 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LEI+FNGSV++YE+LE LEFTSDRKRMSVVVKDC +G I LLSKGADEAILPYA AGQQT
Sbjct: 481 LEIRFNGSVIRYEVLEILEFTSDRKRMSVVVKDCQNGKIILLSKGADEAILPYARAGQQT 540
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
RT +AVE YSQLGLRTLCLAWRE+EE+EY EWS+ FKEASS L+DREWRIAEVCQRLEH
Sbjct: 541 RTIGDAVEHYSQLGLRTLCLAWRELEENEYLEWSVKFKEASSLLVDREWRIAEVCQRLEH 600
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
DL +LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLYILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LL IDGKTE++V RSLERVLLTMRIT SEPKDVAFV+DGWALEIALKH+RK F ELAILS
Sbjct: 661 LLMIDGKTEEDVSRSLERVLLTMRITASEPKDVAFVIDGWALEIALKHHRKDFVELAILS 720
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTAICCRVTPSQKAQLVE+LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVEILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIL 826
ADYSIG+FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI
Sbjct: 781 ADYSIGRFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIF 826
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334188192|ref|NP_568633.2| phospholipid-translocating ATPase [Arabidopsis thaliana] gi|332007695|gb|AED95078.1| phospholipid-translocating ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1514 bits (3920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 721/826 (87%), Positives = 777/826 (94%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
+ R++YINDDE S++L C NR+SNRKYTL NFLPKNLWEQFSRFMNQYFLLIACLQLWSL
Sbjct: 33 LDRFVYINDDEASKELCCDNRISNRKYTLWNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 92
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSA+KEAWDDY+RYLSDKKANEKEVW+VKQGIKK IQ+QDI+
Sbjct: 93 ITPVNPASTWGPLIFIFAVSASKEAWDDYHRYLSDKKANEKEVWIVKQGIKKHIQAQDIQ 152
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVL+GTSDPQGVCYVETAALDGETDLKTR+IP+AC+G+D ELLH
Sbjct: 153 VGNIVWLRENDEVPCDLVLLGTSDPQGVCYVETAALDGETDLKTRVIPSACVGIDLELLH 212
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD N+RL PPFIDNDVC LTIKNT+LQSCYLRNTEWACGV+VY
Sbjct: 213 KMKGVIECPVPDKDIRRFDANMRLFPPFIDNDVCSLTIKNTLLQSCYLRNTEWACGVSVY 272
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGN+TKLGM+RGI EPKLTA+DAMIDKLTGAIFVFQIVVV+VLG AGNVWKDTEARKQWY
Sbjct: 273 TGNQTKLGMSRGIAEPKLTAMDAMIDKLTGAIFVFQIVVVLVLGIAGNVWKDTEARKQWY 332
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
V YP+E PWYELLVIPLRFELLCSIMIPISIKVSLDLVK LYAKFI+WD EMID ET T
Sbjct: 333 VQYPEEAPWYELLVIPLRFELLCSIMIPISIKVSLDLVKGLYAKFIEWDVEMIDQETGTA 392
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
S+A NTAISEDL QVEYILTDKTGTLT+N+MIFRRCCIGGIFYGNE GDALKD LLNAI
Sbjct: 393 SYAANTAISEDLGQVEYILTDKTGTLTDNKMIFRRCCIGGIFYGNENGDALKDAQLLNAI 452
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
TSGS DVIRFLTVMA+CNTV+P +SKAG I+YKAQSQDE+ALV AA++LHMV V KNA++
Sbjct: 453 TSGSTDVIRFLTVMAICNTVLPVQSKAGDIVYKAQSQDEDALVIAASKLHMVFVGKNANL 512
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LEI+FNGSV++YE+LE LEFTSDRKRMSVVVKDC +G I LLSKGADEAILPYA AGQQT
Sbjct: 513 LEIRFNGSVIRYEVLEILEFTSDRKRMSVVVKDCQNGKIILLSKGADEAILPYARAGQQT 572
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
RT +AVE YSQLGLRTLCLAWRE+EE+EY EWS+ FKEASS L+DREWRIAEVCQRLEH
Sbjct: 573 RTIGDAVEHYSQLGLRTLCLAWRELEENEYLEWSVKFKEASSLLVDREWRIAEVCQRLEH 632
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
DL +LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 633 DLYILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 692
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LL IDGKTE++V RSLERVLLTMRIT SEPKDVAFV+DGWALEIALKH+RK F ELAILS
Sbjct: 693 LLMIDGKTEEDVSRSLERVLLTMRITASEPKDVAFVIDGWALEIALKHHRKDFVELAILS 752
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTAICCRVTPSQKAQLVE+LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 753 RTAICCRVTPSQKAQLVEILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 812
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIL 826
ADYSIG+FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI
Sbjct: 813 ADYSIGRFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIF 858
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297794981|ref|XP_002865375.1| hypothetical protein ARALYDRAFT_356659 [Arabidopsis lyrata subsp. lyrata] gi|297311210|gb|EFH41634.1| hypothetical protein ARALYDRAFT_356659 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1514 bits (3919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 722/826 (87%), Positives = 777/826 (94%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKR++YINDDE S++L C NR+SNRKYTL NFLPKNLWEQFSRFMNQYFLLIACLQLWSL
Sbjct: 1 MKRFVYINDDEASKELCCDNRISNRKYTLWNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSA+KEAWDDY+RYLSDKKANEKEVW+VKQGIKK IQ+QDI+
Sbjct: 61 ITPVNPASTWGPLIFIFAVSASKEAWDDYHRYLSDKKANEKEVWIVKQGIKKHIQAQDIQ 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVL+GTSDPQGVCYVETAALDGETDLKTR+IP+AC+G+D ELLH
Sbjct: 121 VGNIVWLRENDEVPCDLVLLGTSDPQGVCYVETAALDGETDLKTRVIPSACVGIDLELLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD N+RL PPFIDNDVC LTIKNT+LQSCYLRNTEWACGV+VY
Sbjct: 181 KMKGVIECPIPDKDIRRFDANMRLFPPFIDNDVCSLTIKNTLLQSCYLRNTEWACGVSVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGN+TKLGM+RGI EPKLTA+DAMIDKLTGAIFVFQIVVV+VLG AGNVWKDTEARKQWY
Sbjct: 241 TGNQTKLGMSRGIAEPKLTAMDAMIDKLTGAIFVFQIVVVMVLGVAGNVWKDTEARKQWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
V YP+E PWYELLVIPLRFELLCSIMIPISIKVSLDLVK LYAKFI+WD EMID ET T
Sbjct: 301 VQYPEEAPWYELLVIPLRFELLCSIMIPISIKVSLDLVKGLYAKFIEWDVEMIDQETGTA 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
S+A NTAISEDL QVEYILTDKTGTLT+N+MIFRRCCIGGIFYGNE GDALKD LLNAI
Sbjct: 361 SYAANTAISEDLGQVEYILTDKTGTLTDNKMIFRRCCIGGIFYGNENGDALKDAQLLNAI 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
TSGS DVIRFLTVMA+CNTVIP +SKAG I+YKAQSQDE+ALV AAA+LHMV V KNA++
Sbjct: 421 TSGSTDVIRFLTVMAICNTVIPVQSKAGDIVYKAQSQDEDALVIAAAKLHMVFVGKNANL 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LEI+FNGS+++YE+LE LEFTSDRKRMSVVVKDC +G I LLSKGADEAILPYA AGQQT
Sbjct: 481 LEIRFNGSIIRYEVLEILEFTSDRKRMSVVVKDCQNGKIILLSKGADEAILPYACAGQQT 540
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
RT +AVE YSQLGLRTLCLAWRE+EE+EY EWS+ FKEASS L+DREWRIAEVCQRLEH
Sbjct: 541 RTIGDAVEHYSQLGLRTLCLAWRELEENEYLEWSVKFKEASSLLVDREWRIAEVCQRLEH 600
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
DL +LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLYILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LL IDGKT+++V RSLERVLLTMRIT SEPKDVAFV+DGWALEIALKH+ K F ELAILS
Sbjct: 661 LLMIDGKTKEDVSRSLERVLLTMRITASEPKDVAFVIDGWALEIALKHHHKDFVELAILS 720
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTAICCRVTPSQKAQLVE+LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVEILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIL 826
ADYSIG+FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI
Sbjct: 781 ADYSIGRFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIF 826
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449478968|ref|XP_004155467.1| PREDICTED: LOW QUALITY PROTEIN: phospholipid-transporting ATPase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1508 bits (3905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 719/825 (87%), Positives = 784/825 (95%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YIND+E S DLYC NR+SNRKYTL+NFLPKNLWEQFSRFMNQYF LIACLQLW L
Sbjct: 1 MKRYVYINDNEPSNDLYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFXLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQG +K+IQ+QDI
Sbjct: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGTRKIIQAQDIH 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGN+VWLRENDEVP DLVLIGTSDPQG+CY+ET+ALDGETDLKTR+IP+ACMG+DF+LL+
Sbjct: 121 VGNLVWLRENDEVPSDLVLIGTSDPQGICYIETSALDGETDLKTRVIPSACMGIDFDLLN 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
KIKGVIECP PDKDIRRFD N+RL PPFIDNDVCPLTIKNTILQSCYLRNT+W CGVAVY
Sbjct: 181 KIKGVIECPKPDKDIRRFDANIRLFPPFIDNDVCPLTIKNTILQSCYLRNTDWVCGVAVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGNETKLGM+RG+PEPKLTA+DAMIDKLTGAIFVFQ+VVV+VLG AGNVWKD+EARK WY
Sbjct: 241 TGNETKLGMSRGVPEPKLTAMDAMIDKLTGAIFVFQLVVVVVLGIAGNVWKDSEARKLWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
V +P+E PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMID E+ P
Sbjct: 301 VQHPEEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDCESGIP 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
SHATNTAISEDL QVEYILTDKTGTLTEN+MIFRRCCI GIFYGNE GDALKD L+NAI
Sbjct: 361 SHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCINGIFYGNENGDALKDKKLVNAI 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
+ SPDV+RFLT+MA+CNTV+P KSK+G ILYKAQSQDE+ALV+AAA LHMV VNK+A+I
Sbjct: 421 ANSSPDVLRFLTIMAICNTVVPTKSKSGNILYKAQSQDEDALVNAAAYLHMVFVNKSATI 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LEI+FNG + +YE+L+TLEFTS+RKRMSVVVKDC +G I L+SKGADEAILPYA+AGQQT
Sbjct: 481 LEIQFNGMLNRYELLDTLEFTSERKRMSVVVKDCQNGKIVLMSKGADEAILPYAYAGQQT 540
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
RTF+EAV+QY+QLGLRTLCLAWRE+EEDEY+EW+ MFKEA+STL+DREWR+AEVCQRLE
Sbjct: 541 RTFIEAVDQYAQLGLRTLCLAWRELEEDEYREWAFMFKEANSTLVDREWRLAEVCQRLER 600
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
+ +VLGVTAIEDRLQDGVPETIETLR+AGINFWMLTGDKQNTAIQIAL CNFISPEPKGQ
Sbjct: 601 NFEVLGVTAIEDRLQDGVPETIETLRRAGINFWMLTGDKQNTAIQIALLCNFISPEPKGQ 660
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LL IDGKTEDEVCRSLERV+LTM+ TTSEPKDVAFVVDGWALEIALK+YR+AFTELAILS
Sbjct: 661 LLLIDGKTEDEVCRSLERVVLTMKTTTSEPKDVAFVVDGWALEIALKNYRRAFTELAILS 720
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825
ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI
Sbjct: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449438125|ref|XP_004136840.1| PREDICTED: LOW QUALITY PROTEIN: phospholipid-transporting ATPase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1501 bits (3886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 720/834 (86%), Positives = 785/834 (94%), Gaps = 9/834 (1%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YIND+E S DLYC NR+SNRKYTL+NFLPKNLWEQFSRFMNQYFLLIACLQLW L
Sbjct: 1 MKRYVYINDNEPSNDLYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQG +K+IQ+QDI
Sbjct: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGTRKIIQAQDIH 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGN+VWLRENDEVP DLVLIGTSDPQG+CY+ET+ALDGETDLKTR+IP+ACMG+DF+LL+
Sbjct: 121 VGNLVWLRENDEVPSDLVLIGTSDPQGICYIETSALDGETDLKTRVIPSACMGIDFDLLN 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
KIKGVIECP PDKDIRRFD N+RL PPFIDNDVCPLTIKNTILQSCYLRNT+W CGVAVY
Sbjct: 181 KIKGVIECPKPDKDIRRFDANIRLFPPFIDNDVCPLTIKNTILQSCYLRNTDWVCGVAVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGNETKLGM+RG+PEPKLTA+DAMIDKLTGAIFVFQ+VVV+VLG AGNVWKD+EARK WY
Sbjct: 241 TGNETKLGMSRGVPEPKLTAMDAMIDKLTGAIFVFQLVVVVVLGIAGNVWKDSEARKLWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
V +P+E PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMID E+ P
Sbjct: 301 VQHPEEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDCESGIP 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
SHATNTAISEDL QVEYILTDKTGTLTEN+MIFRRCCI GIFYGNE GDALKD L+NAI
Sbjct: 361 SHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCINGIFYGNENGDALKDKKLVNAI 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
+ SPDV+RFLT+MA+CNTV+P KSK+G ILYKAQSQDE+ALV+AAA LHMV VNK+A+I
Sbjct: 421 ANSSPDVLRFLTIMAICNTVVPTKSKSGNILYKAQSQDEDALVNAAAYLHMVFVNKSATI 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG--- 537
LEI+FNG + +YE+L+TLEFTS+RKRMSVVVKDC +G I L+SKGADEAILPYA+AG
Sbjct: 481 LEIQFNGMLNRYELLDTLEFTSERKRMSVVVKDCQNGKIVLMSKGADEAILPYAYAGNRK 540
Query: 538 ------QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRI 591
QQTRTF+EAV+QY+QLGLRTLCLAWRE+EEDEY+EW+ MFKEA+STL+DREWR+
Sbjct: 541 IXILYFQQTRTFIEAVDQYAQLGLRTLCLAWRELEEDEYREWAFMFKEANSTLVDREWRL 600
Query: 592 AEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCN 651
AEVCQRLE + +VLGVTAIEDRLQDGVPETIETLR+AGINFWMLTGDKQNTAIQIAL CN
Sbjct: 601 AEVCQRLERNFEVLGVTAIEDRLQDGVPETIETLRRAGINFWMLTGDKQNTAIQIALLCN 660
Query: 652 FISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRK 711
FISPEPKGQLL IDGKTEDEVCRSLERV+LTM+ TTSEPKDVAFVVDGWALEIALK+YR+
Sbjct: 661 FISPEPKGQLLLIDGKTEDEVCRSLERVVLTMKTTTSEPKDVAFVVDGWALEIALKNYRR 720
Query: 712 AFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771
AFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISG
Sbjct: 721 AFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQQADIGVGISG 780
Query: 772 REGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825
REGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI
Sbjct: 781 REGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 834
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 826 | ||||||
| DICTYBASE|DDB_G0282959 | 1536 | DDB_G0282959 "transmembrane pr | 0.487 | 0.262 | 0.468 | 3.5e-184 | |
| DICTYBASE|DDB_G0269380 | 1313 | DDB_G0269380 "P-type ATPase" [ | 0.474 | 0.298 | 0.410 | 1.8e-151 | |
| MGI|MGI:1330848 | 1149 | Atp8a1 "ATPase, aminophospholi | 0.981 | 0.705 | 0.395 | 1.2e-150 | |
| UNIPROTKB|E1BN98 | 1145 | ATP8A1 "Probable phospholipid- | 0.983 | 0.709 | 0.391 | 6.9e-150 | |
| UNIPROTKB|F1NX55 | 1150 | ATP8A1 "Uncharacterized protei | 0.979 | 0.703 | 0.394 | 3e-149 | |
| UNIPROTKB|Q9Y2Q0 | 1164 | ATP8A1 "Probable phospholipid- | 0.504 | 0.358 | 0.424 | 8.2e-149 | |
| UNIPROTKB|Q29449 | 1149 | ATP8A1 "Probable phospholipid- | 0.981 | 0.705 | 0.391 | 1.3e-148 | |
| UNIPROTKB|F1PHG9 | 1164 | ATP8A1 "Uncharacterized protei | 0.504 | 0.358 | 0.424 | 2.3e-147 | |
| FB|FBgn0259221 | 1350 | CG42321 [Drosophila melanogast | 0.978 | 0.598 | 0.398 | 3.2e-145 | |
| ZFIN|ZDB-GENE-100209-2 | 1135 | atp8a2 "ATPase, aminophospholi | 0.481 | 0.350 | 0.427 | 1e-143 |
| DICTYBASE|DDB_G0282959 DDB_G0282959 "transmembrane protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 936 (334.5 bits), Expect = 3.5e-184, Sum P(4) = 3.5e-184
Identities = 192/410 (46%), Positives = 264/410 (64%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R IY ND E ++ Y +NR+SN KYT++ F+PKNL EQF R MN YFL+I LQL+ IT
Sbjct: 22 RTIYANDIERNKK-YPSNRISNTKYTIITFIPKNLMEQFGRAMNIYFLMIGILQLFPSIT 80
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
PV+P STWG L FIFA+SA KEA+DDYNR DKKANE+ +++ K+ IQSQ+I VG
Sbjct: 81 PVDPVSTWGALFFIFAISAVKEAFDDYNRSRRDKKANERIYNILRNNEKQQIQSQNILVG 140
Query: 123 NIVWLRENDEVPCDLVLIGTSDP-QGVCYVETAALDGETDLKTRLIPAACMGMDFELLHK 181
+IV+L EN+E+PCDL+++ TSD YV+T+ LDGETDLK + G++ L
Sbjct: 141 DIVYLTENEEIPCDLLVLSTSDKITNSLYVQTSNLDGETDLKIKYSIKETSGLELSQLKS 200
Query: 182 IKGVIECPGPDKDIRRFDGNL-----RLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACG 236
+GV+ECP P+ +I +FD L R + F +D P+ N +LQ+ +L+NT + G
Sbjct: 201 FQGVLECPVPNAEINKFDSRLSMRANRKVNTFSHSDWLPVDSSNLVLQATHLKNTNYIYG 260
Query: 237 VAVYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAXXXXXXXXXXXLGTAGNVWKDTEAR 296
+ VYTGNETKLG + K T +D I++ T G G+ + +
Sbjct: 261 LVVYTGNETKLGKNKMDVPTKWTKLDKQINRTTIVIFCIQLTLVLIFGFIGDYIRIIQGH 320
Query: 297 KQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPE 356
QWY+ Y + ++IPLRF LL S+MIPIS+KV++D++K YA FI+WD +M + +
Sbjct: 321 TQWYLDYDDTSLSSKTIIIPLRFLLLNSMMIPISLKVTIDVIKYAYALFINWDLKMYNSD 380
Query: 357 TDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNE 406
D P+ A +TA+SEDL Q+EYI TDKTGTLTEN M+F +C I GI Y +
Sbjct: 381 IDCPATANSTALSEDLGQIEYIFTDKTGTLTENVMLFSKCSINGIVYNKD 430
|
|
| DICTYBASE|DDB_G0269380 DDB_G0269380 "P-type ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 799 (286.3 bits), Expect = 1.8e-151, Sum P(2) = 1.8e-151
Identities = 166/404 (41%), Positives = 255/404 (63%)
Query: 430 FLTVMAVCNTVIPAKSKA--GAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNG 487
FLT++AVC++V+P + I+Y+A S DE ALV AA L N++ + + G
Sbjct: 617 FLTLLAVCHSVVPDRPNKDDSEIIYEASSPDEAALVSAAKNLGYAFYNRDPTGCLVNIRG 676
Query: 488 SVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFV--E 545
+ ++E+L LEF SDRKRMSV+ ++ G I L KGAD +LP Q+ + E
Sbjct: 677 KIERFEVLNVLEFNSDRKRMSVICRN-PQGRIILYCKGADTTVLPLLRKDQEELYSITLE 735
Query: 546 AVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVL 605
++ ++ GLRTLCLA+ +EE++YQ+W+ ++KEA+ ++ DR+ ++ +V + +E +L ++
Sbjct: 736 FLQDFAADGLRTLCLAYTYLEEEDYQQWNELYKEAAISIQDRDMKVDKVSELIERNLSLI 795
Query: 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSID 665
G TAIED+LQ+GVP+ I L KA I W+LTGDKQ TAI I SC+ ++ + + ++ ++
Sbjct: 796 GSTAIEDKLQEGVPQAIANLIKANIKIWVLTGDKQETAINIGFSCHLLTSDMR--IIILN 853
Query: 666 GKTEDEVCRSLERVL---LTMRITTSEPKDVAFVVDGWALEIALK-HYRKAFTELAILSR 721
G +++V ++ + + + A VV+G L AL+ + F ELA +
Sbjct: 854 GSNQEDVHNQIQGAIDAYFSDDAENHQNSGFALVVEGSCLNFALEGELKSVFLELAANCK 913
Query: 722 TAICCRVTPSQKAQLVELLK-SCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
+ ICCR TP QKAQ+V++++ + TLAIGDG NDV MIQ A IG+GISG EG+QA A
Sbjct: 914 SVICCRTTPLQKAQVVKMVRDTLRAVTLAIGDGANDVSMIQAAHIGIGISGHEGMQAVMA 973
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQ 824
+DYSI +F FL RL++VHGR+ Y R + L Y FYK+++ Q
Sbjct: 974 SDYSIAQFSFLYRLLVVHGRWDYKRNSKLMLYCFYKNMVFAMTQ 1017
|
|
| MGI|MGI:1330848 Atp8a1 "ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1470 (522.5 bits), Expect = 1.2e-150, P = 1.2e-150
Identities = 330/835 (39%), Positives = 492/835 (58%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I+IN + ++ +C N +S KY ++ FLP+ L+ QF R N +FL IA LQ ++
Sbjct: 37 RTIFINQPQLTK--FCNNHVSTAKYNVITFLPRFLYSQFRRAANSFFLFIALLQQIPDVS 94
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+FI AV+A KE +D R+ +D N+K+ V++ G +++ + + VG
Sbjct: 95 PTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVNVG 154
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL-IPAACMGMDFELLHK 181
+IV ++ + +P D VL+ +S+PQ +CY+ET+ LDGET+LK R +PA D + L +
Sbjct: 155 DIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLKIRQGLPATSDIKDIDSLMR 214
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
I G IEC P++ + F GN+RL + PL +L+ LRNT+W G+ VYT
Sbjct: 215 ISGRIECESPNRHLYDFVGNIRL----DGHGTVPLGADQILLRGAQLRNTQWVHGIVVYT 270
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAXXXXXXXXXXXLGTAGNVWKDTEARKQWYV 301
G++TKL P KL+ V+ + + +W + K WY+
Sbjct: 271 GHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRHSGKDWYL 330
Query: 302 -LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
L+ + L L F +L + +IPIS+ V+L++VK A FI+WD +M TDT
Sbjct: 331 HLHYGGASNFGLNF--LTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTA 388
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNET--GD--ALKDVGL 416
+ A + ++E+L QV+YI +DKTGTLT N M F++C I G+ YG + GD D L
Sbjct: 389 AMARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGQSSQFGDEKTFNDPSL 448
Query: 417 LNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVL 473
L+ + + P + FLT+MAVC+T +P + + I+Y+A S DE ALV AA QL+ V
Sbjct: 449 LDNLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDEGALVRAAKQLNFVF 507
Query: 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP- 532
+ + I G +YE+L LEFTS RKRMSVVV+ SG + L KGAD I
Sbjct: 508 TGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVVVRT-PSGKLRLYCKGADTVIYER 566
Query: 533 YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIA 592
A + ++ +EQ++ GLRTLC A E+ E +++EW ++ AS+++ +R ++
Sbjct: 567 LAETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFEEWRAVYHRASTSVQNRLLKLE 626
Query: 593 EVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652
E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGDKQ TAI I SC
Sbjct: 627 ESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGDKQETAINIGHSCRL 686
Query: 653 ISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH-YRK 711
+ G ++ +G D +L R T+ + D A ++DG L+ AL R+
Sbjct: 687 LKRN-MGMIVINEGSL-DGTRETLSRHCTTLGDALRKENDFALIIDGKTLKYALTFGVRQ 744
Query: 712 AFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGIS 770
F +LA+ + ICCRV+P QK+++VE++K TLAIGDG NDV MIQ A +GVGIS
Sbjct: 745 YFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVITLAIGDGANDVSMIQTAHVGVGIS 804
Query: 771 GREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825
G EGLQAA ++DYSI +F++LK L++VHG ++YNR + Y FYK++++ I+I
Sbjct: 805 GNEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNRVSKCILYCFYKNIVLYIIEI 859
|
|
| UNIPROTKB|E1BN98 ATP8A1 "Probable phospholipid-transporting ATPase IA" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1463 (520.1 bits), Expect = 6.9e-150, P = 6.9e-150
Identities = 327/836 (39%), Positives = 490/836 (58%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I+IN + ++ +C N +S KY ++ FLP+ L+ QF R N +FL IA LQ ++
Sbjct: 34 RTIFINQPQLTK--FCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQIPDVS 91
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+FI AV+A KE +D R+ +D N+K+ V++ G +++ + + VG
Sbjct: 92 PTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVNVG 151
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL-IPAACMGMDFELLHK 181
+IV ++ + +P D VL+ +S+PQ +CY+ET+ LDGET+LK R +PA D + L +
Sbjct: 152 DIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLKIRQGLPATSDIKDIDSLMR 211
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
+ G IEC P++ + F GN+RL PL +L+ LRNT+W G+ VYT
Sbjct: 212 LSGRIECESPNRHLYDFVGNIRL----DGRSTVPLGADQILLRGAQLRNTQWVHGIVVYT 267
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAXXXXXXXXXXXLGTAGNVWKDTEARKQWYV 301
G++TKL P KL+ V+ + + +W + + WY+
Sbjct: 268 GHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRHSGRDWYL 327
Query: 302 -LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
L + L L F +L + +IPIS+ V+L++VK A FI+WD +M TDT
Sbjct: 328 NLNYGGANNFGLNF--LTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTA 385
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNET--GD--ALKDVGL 416
+ A + ++E+L QV+YI +DKTGTLT N M F++C I G+ YG + GD D L
Sbjct: 386 AMARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGQNSQFGDEKTFSDSSL 445
Query: 417 LNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVL 473
L + + P + FLT+MAVC+T +P + + I+Y+A S DE ALV AA QL+ V
Sbjct: 446 LENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDEGALVRAAKQLNFVF 504
Query: 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP- 532
+ + I G +YE+L LEFTS RKRMSV+V+ SG + L KGAD I
Sbjct: 505 TGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVRT-PSGKLRLYCKGADTVIYDR 563
Query: 533 YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIA 592
A + ++ +EQ++ GLRTLC A E+ E ++QEW ++ AS+++ +R ++
Sbjct: 564 LAETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYHRASTSVQNRLLKLE 623
Query: 593 EVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652
E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGDKQ TAI I SC
Sbjct: 624 ESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGDKQETAINIGHSCKL 683
Query: 653 ISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH-YRK 711
+ G ++ +G D +L R T+ + D A ++DG L+ AL R+
Sbjct: 684 LRKN-MGMIVINEGSL-DGTRETLSRHCTTLGDALRKENDFALIIDGKTLKYALTFGVRQ 741
Query: 712 AFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGIS 770
F +LA+ + ICCRV+P QK+++VE++K TLAIGDG NDV MIQ A +GVGIS
Sbjct: 742 YFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVITLAIGDGANDVSMIQTAHVGVGIS 801
Query: 771 GREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIL 826
G EGLQAA ++DYSI +F++LK L++VHG ++YNR + Y FYK++++ I+++
Sbjct: 802 GNEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNRVSKCILYCFYKNIVLYIIEVI 857
|
|
| UNIPROTKB|F1NX55 ATP8A1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1457 (517.9 bits), Expect = 3.0e-149, P = 3.0e-149
Identities = 331/838 (39%), Positives = 495/838 (59%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I+IN + ++ +C N +S KY ++ FLP+ L+ QF R N +FL IA LQ ++
Sbjct: 37 RTIFINQPQLTK--FCNNHVSTAKYNIITFLPRFLYSQFRRAANAFFLFIALLQQIPDVS 94
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+FI AV+A KE +D R+ +D N+K+ V++ G +++ + + VG
Sbjct: 95 PTGRYTTLVPLLFILAVAAVKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVDVG 154
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL--IPAACMGMDFELLH 180
+IV ++ + +P D VL+ +S+PQ +CY+ET+ LDGET+LK R +P D E L
Sbjct: 155 DIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLKIRQQGLPLTSDIKDIESLM 214
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
++ G IEC P++ + F GN+RL + PL +L+ LRNT+W G+ VY
Sbjct: 215 RLSGRIECESPNRHLYDFVGNIRL----DGHGTVPLGSDQILLRGAQLRNTQWVHGIVVY 270
Query: 241 TGNETKLGMTRGIPEPKLTAVDAM--IDKLTGAXXXXXXXXXXXLGTAGNVWKDTEARKQ 298
TG++TKL P K++ V+ + I L +G+A VW + +
Sbjct: 271 TGHDTKLMQNSTSPPLKMSNVERITNIQILILFCILIAMSLICSIGSA--VWNRRHSERD 328
Query: 299 WYV-LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPET 357
WY+ L + L L F +L + +IPIS+ V+L++VK + A FI+WD +M T
Sbjct: 329 WYLDLNYGGASNFGLNF--LTFIILFNNLIPISLLVTLEVVKFIQAYFINWDIDMHYEPT 386
Query: 358 DTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYG--NETGDA--LKD 413
DT + A + ++E+L QV+YI +DKTGTLT N M F++C + G+ YG ++ GD D
Sbjct: 387 DTAAMARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTVAGVAYGQGSQNGDEKMFSD 446
Query: 414 VGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLH 470
LL + + P + FLT+MAVC+T +P + + I+Y+A S DE ALV AA L
Sbjct: 447 SSLLENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDEGALVRAARHLR 505
Query: 471 MVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAI 530
V + + I+ G +YE+L LEFTS RKRMSV+V+ +G + L KGAD I
Sbjct: 506 FVFTGRTPDSVIIESLGHEERYELLNVLEFTSSRKRMSVIVRT-PTGKLRLYCKGADTVI 564
Query: 531 LP-YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREW 589
A + + ++ +EQ++ GLRTLC A E+ E +YQEW ++ AS+ + +R
Sbjct: 565 YDRLAESSKYKEITLKHLEQFATEGLRTLCFAVAEISESDYQEWLDVYHRASTAIQNRAL 624
Query: 590 RIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS 649
++ E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGDKQ TAI I S
Sbjct: 625 KLEESYELIEKNLQLLGATAIEDKLQDKVPETIETLMKADIKIWILTGDKQETAINIGHS 684
Query: 650 CNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH- 708
C + G ++ +G D +L T+ + D A ++DG +L+ AL
Sbjct: 685 CKLLRKN-MGLIVINEGSL-DGTRETLSHHCSTLGDALRKENDFALIIDGKSLKYALTFG 742
Query: 709 YRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGV 767
R+ F +LA+ + ICCRV+P QK+++VE++K TLAIGDG NDV MIQ A +GV
Sbjct: 743 VRQYFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVVTLAIGDGANDVSMIQTAHVGV 802
Query: 768 GISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825
GISG EGLQAA ++DYSI +F++LK L+LVHG ++YNR A Y FYK++++ I+I
Sbjct: 803 GISGNEGLQAANSSDYSIAQFKYLKNLLLVHGAWNYNRVAKCILYCFYKNIVLYIIEI 860
|
|
| UNIPROTKB|Q9Y2Q0 ATP8A1 "Probable phospholipid-transporting ATPase IA" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 827 (296.2 bits), Expect = 8.2e-149, Sum P(2) = 8.2e-149
Identities = 182/429 (42%), Positives = 264/429 (61%)
Query: 403 YGNETGDALKDVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDE 459
+G+E D LL + + P + FLT+MAVC+T +P + + I+Y+A S DE
Sbjct: 452 FGDEK--TFSDSSLLENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDE 508
Query: 460 EALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNI 519
ALV AA QL+ V + + I G +YE+L LEFTS RKRMSV+V+ SG +
Sbjct: 509 GALVRAAKQLNFVFTGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVRT-PSGKL 567
Query: 520 SLLSKGADEAILP-YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFK 578
L KGAD I A + ++ +EQ++ GLRTLC A E+ E ++QEW +++
Sbjct: 568 RLYCKGADTVIYDRLAETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYQ 627
Query: 579 EASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGD 638
AS+++ +R ++ E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGD
Sbjct: 628 RASTSVQNRLLKLEESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGD 687
Query: 639 KQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVD 698
KQ TAI I SC + G ++ +G D +L R T+ + D A ++D
Sbjct: 688 KQETAINIGHSCKLLKKN-MGMIVINEGSL-DGTRETLSRHCTTLGDALRKENDFALIID 745
Query: 699 GWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGND 756
G L+ AL R+ F +LA+ + ICCRV+P QK+++VE++K TLAIGDG ND
Sbjct: 746 GKTLKYALTFGVRQYFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVVTLAIGDGAND 805
Query: 757 VRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYK 816
V MIQ A +GVGISG EGLQAA ++DYSI +F++LK L+++HG ++YNR + Y FYK
Sbjct: 806 VSMIQTAHVGVGISGNEGLQAANSSDYSIAQFKYLKNLLMIHGAWNYNRVSKCILYCFYK 865
Query: 817 SLLICFIQI 825
++++ I+I
Sbjct: 866 NIVLYIIEI 874
|
|
| UNIPROTKB|Q29449 ATP8A1 "Probable phospholipid-transporting ATPase IA" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1451 (515.8 bits), Expect = 1.3e-148, P = 1.3e-148
Identities = 327/835 (39%), Positives = 489/835 (58%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I+IN + ++ +C N +S KY ++ FLP+ L+ QF R N +FL IA LQ ++
Sbjct: 37 RTIFINQPQLTK--FCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQIPDVS 94
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+FI AV+A KE +D R+ +D N+K+ V++ G +++ + + VG
Sbjct: 95 PTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVNVG 154
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL-IPAACMGMDFELLHK 181
+IV ++ + +P D VL+ +S+PQ +CY+ET+ LDGET+LK R +PA D + L +
Sbjct: 155 DIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLKIRQGLPATSDIKDIDSLMR 214
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
+ G IEC P++ + F GN+RL PL +L+ LRNT+W G+ VYT
Sbjct: 215 LSGRIECESPNRHLYDFVGNIRL----DGRSTVPLGADQILLRGAQLRNTQWVHGIVVYT 270
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAXXXXXXXXXXXLGTAGNVWKDTEARKQWYV 301
G++TKL P KL+ V+ + + +W + + WY+
Sbjct: 271 GHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRHSGRDWYL 330
Query: 302 -LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
L + L L F +L + +IPIS+ V+L++VK A FI+WD +M TDT
Sbjct: 331 NLNYGGANNFGLNF--LTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTA 388
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNET--GD--ALKDVGL 416
+ A + ++ +L QV+YI +DKTGTLT N M F++C I G+ YG + GD D L
Sbjct: 389 AMARTSNLNVELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGQNSQFGDEKTFSDSSL 448
Query: 417 LNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVL 473
L + + P + FLT+MAVC+T +P + + I+Y+A S DE ALV AA QL+ V
Sbjct: 449 LENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDEGALVRAAKQLNFVF 507
Query: 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP- 532
+ + I G +YE+L LEFTS RKRMSV+V+ SG + L KGAD I
Sbjct: 508 TGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVRT-PSGKLRLYCKGADTVIYDR 566
Query: 533 YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIA 592
A + ++ +EQ++ GLRTLC A E+ E ++QEW ++ AS+++ +R ++
Sbjct: 567 LAETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYHRASTSVQNRLLKLE 626
Query: 593 EVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652
E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGDKQ TAI I SC
Sbjct: 627 ESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGDKQETAINIGHSCK- 685
Query: 653 ISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH-YRK 711
+ + G ++ +G D +L R T+ + D A ++DG L+ AL R+
Sbjct: 686 LRRKNMGMIVINEGSL-DGTRETLSRHCTTLGDALRKENDFALIIDGKTLKYALTFGVRQ 744
Query: 712 AFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGIS 770
F +LA+ + ICCRV+P QK+++VE++K TLAIGDG NDV MIQ A +GVGIS
Sbjct: 745 YFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVITLAIGDGANDVSMIQTAHVGVGIS 804
Query: 771 GREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825
G EGLQAA ++DYSI +F++LK L++VHG ++YNR + Y FYK++++ I+I
Sbjct: 805 GNEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNRGSKCILYCFYKNIVLYIIEI 859
|
|
| UNIPROTKB|F1PHG9 ATP8A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 820 (293.7 bits), Expect = 2.3e-147, Sum P(2) = 2.3e-147
Identities = 182/429 (42%), Positives = 263/429 (61%)
Query: 403 YGNETGDALKDVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDE 459
+G+E D LL + + P + FLT+MAVC+T +P + + I+Y+A S DE
Sbjct: 452 FGDEK--TFSDSSLLENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDE 508
Query: 460 EALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNI 519
ALV AA QL+ V + + I G +YE+L LEFTS RKRMSV+V+ SG +
Sbjct: 509 GALVRAAKQLNFVFTGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVRT-PSGKL 567
Query: 520 SLLSKGADEAILP-YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFK 578
L KGAD I A + ++ +EQ++ GLRTLC A E+ E ++QEW +++
Sbjct: 568 RLYCKGADTVIYDRLAETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYQ 627
Query: 579 EASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGD 638
AS+++ +R ++ E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGD
Sbjct: 628 RASTSVQNRLLKLEESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGD 687
Query: 639 KQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVD 698
KQ TAI I SC + G ++ +G D +L R + + D A ++D
Sbjct: 688 KQETAINIGHSCKLLRKN-MGMIVINEGSL-DATRETLGRHCTILGDALRKENDFALIID 745
Query: 699 GWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGND 756
G L+ AL R+ F +LA+ + ICCRV+P QK+++VE++K TLAIGDG ND
Sbjct: 746 GKTLKYALTFGVRQYFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVITLAIGDGAND 805
Query: 757 VRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYK 816
V MIQ A +GVGISG EGLQAA ++DYSI +F++LK L++VHG ++YNR + Y FYK
Sbjct: 806 VSMIQTAHVGVGISGNEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNRVSKCILYCFYK 865
Query: 817 SLLICFIQI 825
++++ I+I
Sbjct: 866 NIVLYIIEI 874
|
|
| FB|FBgn0259221 CG42321 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1419 (504.6 bits), Expect = 3.2e-145, P = 3.2e-145
Identities = 333/836 (39%), Positives = 495/836 (59%)
Query: 2 KRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLI 61
+R I +N + ++ Y NR++ KY+ ++FLP L+EQF R+ N +FLLIA LQ +
Sbjct: 216 RRIINLNGPQPTK--YGNNRITTAKYSFISFLPAFLFEQFRRYSNCFFLLIAILQQIPEV 273
Query: 62 TPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRV 121
+P +T PL+FI +VSA KE +D R+ +D + N + + + G ++ ++ V
Sbjct: 274 SPTGRYTTLVPLMFILSVSAIKEIIEDIKRHRADNEINHRSIERLDSGSWCTVRWSELTV 333
Query: 122 GNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR-LIPAACMGMDFELLH 180
G+I+ + N P DL+L+ +S+PQ +C++ETA LDGET+LK R +PA ++ + L
Sbjct: 334 GDIIKVGINTFFPADLILLSSSEPQAMCFIETANLDGETNLKIRQALPATAELLETKDLQ 393
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNT-ILQ-SCYLRNTEWACGVA 238
+++G IEC P++ + F+G LR + P + N +LQ LRNT W G+
Sbjct: 394 RLEGRIECELPNRHLYEFNGVLR------ETGKPPAALGNDQVLQRGAILRNTAWVFGIV 447
Query: 239 VYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAXXXXXXXXXXXL----GTAGNVWKDTE 294
VY+G ETKL M P + +DKLT L G W
Sbjct: 448 VYSGQETKL-MKNSTSAPLKRST---VDKLTNTQILMLFMILISLCIISGLCNLFWTREH 503
Query: 295 ARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMID 354
+ WY L +F L L F +L + +IPIS++V+L+LV+ L A FI++D EM
Sbjct: 504 SETDWY-LGLTDFKTKSLGYNLLTFFILYNNLIPISLQVTLELVRFLQAIFINYDIEMYH 562
Query: 355 PETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNE-TGDALKD 413
E++TP+ A + ++E+L V+YI +DKTGTLT+N M F++C I G Y E T + +
Sbjct: 563 EESNTPAMARTSNLNEELGMVKYIFSDKTGTLTQNVMEFKKCSIAGYVYTAERTPEESQL 622
Query: 414 VGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVL 473
V + S + FL +++VC+TVIP + + G ++Y A S DE ALV A + +
Sbjct: 623 VQNILGRHETSAVIEEFLELLSVCHTVIPERKENGNMIYHAASPDERALVEGAQKFGYIF 682
Query: 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP- 532
+ +EI G +YE+L LEFTS RKRMS++V+ + I L KGAD I
Sbjct: 683 DTRTPKYVEINALGVRKRYEVLNVLEFTSSRKRMSLIVRTPEN-KIKLFCKGADTVIYER 741
Query: 533 YAHAGQQTRT-FVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRI 591
A GQ R + +E+++ GLRTLCLA ++ D YQEWS F +AS L +RE ++
Sbjct: 742 LAPQGQAFREQTLRHLEEFASDGLRTLCLAVADIRPDVYQEWSQTFDKASVALQNRESKL 801
Query: 592 AEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCN 651
+ +E++L++LG TAIEDRLQDGVPETI +L AGI W+LTGDKQ TAI I SC
Sbjct: 802 EDAANLIENNLRLLGATAIEDRLQDGVPETIASLLDAGIYIWVLTGDKQETAINIGYSCR 861
Query: 652 FISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALK-HYR 710
IS ++ ++ ++ D + R + ++++ +VA V+DG L+ AL R
Sbjct: 862 LISHSM--DIIILNEESLDATREVIHRHYGEFKSSSAKDANVALVIDGTTLKYALSCDLR 919
Query: 711 KAFTELAILSRTAICCRVTPSQKAQLVELL-KSCDYRTLAIGDGGNDVRMIQKADIGVGI 769
F +L IL R ICCRV+P QKA++VE++ +S + TLAIGDG NDV MIQKA++G+GI
Sbjct: 920 NDFQDLCILCRVVICCRVSPMQKAEVVEMVTQSTNAVTLAIGDGANDVAMIQKANVGIGI 979
Query: 770 SGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825
SG EGLQAA A+DYSI +FR+L+RL+LVHG ++Y R + L YSFYK++ + I++
Sbjct: 980 SGVEGLQAACASDYSIAQFRYLQRLLLVHGAWNYARISKLILYSFYKNVCLYVIEL 1035
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| ZFIN|ZDB-GENE-100209-2 atp8a2 "ATPase, aminophospholipid transporter-like, class I, type 8A, member 2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 801 (287.0 bits), Expect = 1.0e-143, Sum P(2) = 1.0e-143
Identities = 173/405 (42%), Positives = 250/405 (61%)
Query: 424 SPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEI 483
SP + FLT+MAVC+TV+P + I+Y+A S DE ALV A L V + + I
Sbjct: 474 SPQICEFLTMMAVCHTVVPERED-NQIIYQASSPDEGALVKGAKSLGFVFTARTPHSVII 532
Query: 484 KFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTF 543
+ G YE+L LEF+S+RKRMSV+V+ +GN+ L KGAD I + Q +
Sbjct: 533 EARGKEQTYELLNVLEFSSNRKRMSVIVRT-PTGNLRLYCKGADNVIFERLNVTSQYKEL 591
Query: 544 VEA-VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDL 602
A +EQ++ GLRTLC A+ ++EE Y EW + S+ L DR ++ E + +E +L
Sbjct: 592 TVAHLEQFATEGLRTLCFAYVDLEEGAYLEWLKEYNRISTVLKDRAQKLEECYELIEKNL 651
Query: 603 KVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLL 662
+LG TAIEDRLQ GVPETI TL +A I W+LTGDKQ TAI I SC +S L+
Sbjct: 652 LLLGATAIEDRLQAGVPETIATLMRADIKIWVLTGDKQETAINIGYSCRLVSHGMS--LI 709
Query: 663 SIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALK-HYRKAFTELAILSR 721
++ + D +L ++ + + ++A ++DG L+ AL R+AF +LA+ +
Sbjct: 710 IVNEDSLDATRATLTAHCSSLGDSLRKENELALIIDGQTLKYALSFEVRQAFLDLALSCK 769
Query: 722 TAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
ICCRV+P QK+++V+++K TLAIGDG NDV MIQ A +GVGISG EG+QA +
Sbjct: 770 AVICCRVSPLQKSEIVDMVKKHVKAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNS 829
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825
+DYSI +F +L++L+LVHG +SYNR Y FYK++++ I++
Sbjct: 830 SDYSIAQFSYLEKLLLVHGAWSYNRVTKCILYCFYKNVVLYIIEL 874
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P98205 | ALA2_ARATH | 3, ., 6, ., 3, ., 1 | 0.8753 | 1.0 | 0.7461 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_Genewise1_v1.C_640607 | aminophospholipid ATPase (1108 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 826 | |||
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.0 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 1e-171 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-121 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 7e-74 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 5e-34 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-24 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 8e-23 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-18 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 8e-14 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 5e-12 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 6e-12 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 8e-11 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 9e-11 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 2e-10 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 8e-10 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 3e-08 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 3e-07 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 3e-06 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 4e-06 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 4e-05 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 7e-05 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 1e-04 | |
| PRK13582 | 205 | PRK13582, thrH, phosphoserine phosphatase; Provisi | 2e-04 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 2e-04 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 2e-04 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 9e-04 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 0.001 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 0.001 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 0.001 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 0.002 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 0.003 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 0.004 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 779 bits (2014), Expect = 0.0
Identities = 345/857 (40%), Positives = 494/857 (57%), Gaps = 58/857 (6%)
Query: 17 YCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFI 76
+C+N++S KYT++ FLPKNL+EQF RF N YFL++A LQ +++P ++ PL F+
Sbjct: 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFV 60
Query: 77 FAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIK-KLIQSQDIRVGNIVWLRENDEVPC 135
V+A KEA +D R DK+ N + V++ + I +D+RVG+IV +++++ +P
Sbjct: 61 LIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPA 120
Query: 136 DLVLIGTSDPQGVCYVETAALDGETDLKTR--LIPAACMGMDFELLHKIKGVIECPGPDK 193
DL+L+ +S+P GVCYVETA LDGET+LK R L M +D + + G IEC P+
Sbjct: 121 DLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKM-LDEDDIKNFSGEIECEQPNA 179
Query: 194 DIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRGI 253
+ F GN+ + PL+ N +L+ C LRNT+W GV VYTG++TKL
Sbjct: 180 SLYSFQGNMT----INGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQ 235
Query: 254 PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLY---PQEFPWY 310
K + ++ ++ L +F V+ ++ +W D + WY+ +
Sbjct: 236 APSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAAN 295
Query: 311 ELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISE 370
L F +L S +IPIS+ VSL+LVKS+ A FI+ D +M +TDTP+ + ++E
Sbjct: 296 GFFSF-LTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNE 354
Query: 371 DLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYG---NETGDAL-KDVGLLN-------- 418
+L QVEYI +DKTGTLT+N M F++C I G+ YG E D + + +G
Sbjct: 355 ELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGSYVENENSMLV 414
Query: 419 ---AITSGSPDVIR--------------FLTVMAVCNTVIP--AKSKAGAILYKAQSQDE 459
T P ++ F +A+C+TV+P I Y+A S DE
Sbjct: 415 ESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDE 474
Query: 460 EALVHAAAQLHMVLVNK--NASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSG 517
ALV AA + V + + L I+ +G +YEIL LEF SDRKRMSV+V+ G
Sbjct: 475 AALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVR-NPDG 533
Query: 518 NISLLSKGADEAILPY--AHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSL 575
I LL KGAD I + Q E +E Y+ GLRTLC+A+RE+ E+EY+EW+
Sbjct: 534 RIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNE 593
Query: 576 MFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWML 635
+ EAS+ L DRE ++ V + +E DL +LG TAIED+LQ+GVPETIE LR+AGI W+L
Sbjct: 594 EYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVL 653
Query: 636 TGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE------ 689
TGDK TAI I SC +S + + I + D + + T+ E
Sbjct: 654 TGDKVETAINIGYSCRLLSRNME--QIVITSDSLDATRSVEAAIKFGLEGTSEEFNNLGD 711
Query: 690 PKDVAFVVDGWALEIALKHY-RKAFTELAILSRTAICCRVTPSQKAQLVELLK-SCDYRT 747
+VA V+DG +L AL K F +LA+ + ICCRV+PSQKA +V L+K S T
Sbjct: 712 SGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTT 771
Query: 748 LAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTA 807
LAIGDG NDV MIQ+AD+GVGISG+EG+QA A+D++IG+FRFL +L+LVHGR+SY R +
Sbjct: 772 LAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRIS 831
Query: 808 FLSQYSFYKSLLICFIQ 824
+ Y FYK+L+ IQ
Sbjct: 832 KMILYFFYKNLIFAIIQ 848
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This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 526 bits (1357), Expect = e-171
Identities = 313/890 (35%), Positives = 473/890 (53%), Gaps = 79/890 (8%)
Query: 3 RYIYINDDETSQDLY--CANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACL-QLWS 59
R +Y+ND E S + + N + KY++ +FLP+NL+EQF R YFL+IA L QL
Sbjct: 71 RLVYLNDPEKSNERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQ 130
Query: 60 LITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDI 119
L AS PL F+ V+A K+A++D+ R+ SD+ N + WV+ + + +DI
Sbjct: 131 LAVFGRGASIL-PLAFVLLVTAVKDAYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDI 189
Query: 120 RVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELL 179
RVG I+ ++ ND +PCD+VL+ TSDP GV YV+T LDGE++LKTR + E
Sbjct: 190 RVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKIPEK- 248
Query: 180 HKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239
KI G+I+C P+++I F N+ +D L N IL+ C L+NT WA GVAV
Sbjct: 249 EKINGLIKCEKPNRNIYGFQANME-----VDGKRLSLGPSNIILRGCELKNTAWAIGVAV 303
Query: 240 YTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEA---- 295
Y G ETK + K + ++ ++ + +F I + ++ VW
Sbjct: 304 YCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELD 363
Query: 296 ------RKQWYVLYPQEFPWY----ELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKF 345
RK + P+ + +Y E+ L ++ IMIPIS+ +S++LV+ A F
Sbjct: 364 TIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYF 423
Query: 346 IDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN 405
+ D +M D +++ I+EDL Q++Y+ +DKTGTLTEN+M F+ I G+ Y +
Sbjct: 424 MIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSD 483
Query: 406 ET---------------GDALK-------DVGLLNAITSGS-----PDVIRFLTVMAVCN 438
G L+ D LL SG V F +A CN
Sbjct: 484 GRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACN 543
Query: 439 TVIP------AKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQY 492
T++P + + Y+ +S DE+ALV+AAA +L+ + + + I +G ++
Sbjct: 544 TIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRF 603
Query: 493 EILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT---RTFVEAVEQ 549
+L EF SDRKRMSV++ C + + KGAD ++ R +
Sbjct: 604 NVLGLHEFDSDRKRMSVIL-GCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHT 662
Query: 550 YSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTA 609
YS LGLRTL + RE+ + E+++W F+ AS+ LI R + +V +E++L +LG +A
Sbjct: 663 YSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASA 722
Query: 610 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE 669
IED+LQ GVPE IE+LR AGI W+LTGDKQ TAI I S ++ K + I+ ++
Sbjct: 723 IEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLT--NKMTQIIINSNSK 780
Query: 670 DEVCRSLERVLLTMR--ITTSEPKD------------VAFVVDGWALEIAL-KHYRKAFT 714
+ +SLE L+ + T S VA ++DG +L L +
Sbjct: 781 ESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLF 840
Query: 715 ELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGISGRE 773
+LA +CCRV P QKA +V L+K+ TLAIGDG NDV MIQ AD+GVGISG+E
Sbjct: 841 QLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQE 900
Query: 774 GLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFI 823
G QA A+D+++G+FRFL L+LVHG ++Y R ++ Y+FY++ + +
Sbjct: 901 GRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLV 950
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Length = 1178 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 388 bits (999), Expect = e-121
Identities = 203/828 (24%), Positives = 321/828 (38%), Gaps = 159/828 (19%)
Query: 7 INDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQ--LWSLITPV 64
++++E + L + + L K L QF L+ A L + +
Sbjct: 45 LSEEEVKRRLKKYGPNELPEEKKRSLLKKFL-RQFKDPFIILLLVAALLSAFVGDWVDAG 103
Query: 65 NPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNI 124
A ++ I A+ + + + KK + + V++ G I + ++ G+I
Sbjct: 104 VDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDI 163
Query: 125 VWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKG 184
V L D VP DL L+ +SD V+ +AL GE+ + D L
Sbjct: 164 VLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVEK-QALPLTKSDAPL------ 212
Query: 185 VIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNE 244
G D+D N + + + A G+ V TG E
Sbjct: 213 -----GLDRD-------------------------NMLFSGTTVVSGR-AKGIVVATGFE 241
Query: 245 TKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYV 301
T+ G + T + ++KL + V +V+ ++ G
Sbjct: 242 TEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVG-------------- 287
Query: 302 LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPS 361
L+ E L L +P + + + +L A+ + D ++
Sbjct: 288 LFRGGNGLLESF---LTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIV-------- 336
Query: 362 HATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAIT 421
+ E L V+ I +DKTGTLT+N+M ++ Y N G + D L
Sbjct: 337 --RSLNAIETLGSVDVICSDKTGTLTQNKMTVKKI------YINGGGKDIDDKDLK---- 384
Query: 422 SGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASIL 481
SP ++RFL A+CN+V P K+ Y+A E ALV A +L L + S L
Sbjct: 385 -DSPALLRFLLAAALCNSVTPEKNGW----YQAGDPTEGALVEFAEKLGFSL---DLSGL 436
Query: 482 EIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTR 541
E++ Y IL + F S+RKRMSV+VK G L KGA E IL
Sbjct: 437 EVE-------YPILAEIPFDSERKRMSVIVKT-DEGKYILFVKGAPEVILERC------- 481
Query: 542 TFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHD 601
+ +E ++ GLRTL A +E+ + + ++ +K+ D E +E D
Sbjct: 482 KSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDE------IESD 535
Query: 602 LKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQL 661
L LG+T IED ++ V E IE LR+AGI WM+TGD TAI IA C
Sbjct: 536 LVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECG---------- 585
Query: 662 LSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELA-ILS 720
I + V+DG L+ ELA ++
Sbjct: 586 -----------------------IEAEAESAL--VIDGAELDALSDE------ELAELVE 614
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
++ RV+P QKA++VE L+ + GDG ND ++ AD+G+ + G EG AA+
Sbjct: 615 ELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAM-GGEGTDAAKE 673
Query: 781 AD--YSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIL 826
A + L +V GR Y Y K++ ++
Sbjct: 674 AADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLI 721
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 250 bits (641), Expect = 7e-74
Identities = 135/598 (22%), Positives = 215/598 (35%), Gaps = 163/598 (27%)
Query: 72 PLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLREND 131
L+F+ V K +D R LSD+ N + V++ G K+ I ++D+ G++V ++ +
Sbjct: 6 VLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNGWKE-IPAKDLVPGDVVLVKSGE 64
Query: 132 EVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGP 191
VP D VL+ G C+V+ + L GE++ + L G I
Sbjct: 65 TVPADGVLL-----SGSCFVDESNLTGESNPVLK----------TALKETQSGTITGDLV 109
Query: 192 DKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTR 251
F G L + +T + T V V TG ET R
Sbjct: 110 FAGTYVFGGTLIV----------VVTPTGIL-------TTVGRIAVVVKTGFET-----R 147
Query: 252 GIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYE 311
+ K ++ I + + + V + W ++
Sbjct: 148 TPLQSKRDRLENFI--FILFLLLLALAVFLY--LFIRGWDPN--------------SIFK 189
Query: 312 LLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISED 371
L LR ++ I++P ++ ++ + ++ + N E+
Sbjct: 190 AL---LRALIVLVIVVPPALPAAVTVALAVGDA------RLAK----KGILVRNLNALEE 236
Query: 372 LAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFL 431
L +V+Y+ +DKTGTLT+N+M + I G N V N SG P
Sbjct: 237 LGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDNS----SSLVACDNNYLSGDP------ 286
Query: 432 TVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQ 491
E+AL+ +A + K + +
Sbjct: 287 --------------------------MEKALLKSAELV-------------GKADKGNKE 307
Query: 492 YEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYS 551
Y+IL+ F+S KRMSV+V+ G+ L KGA E IL + + E + +
Sbjct: 308 YKILDVFPFSSVLKRMSVIVET-PDGSDLLFVKGAPEFILERCN------NYEEKYLELA 360
Query: 552 QLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIE 611
+ GLR L A +E LE DL+ LG+ E
Sbjct: 361 RQGLRVLAFASKE---------------------------------LEDDLEFLGLITFE 387
Query: 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI-----SPEPKGQLLSI 664
D L+ ETIE L+ AGI M+TGD TA IA SPE K Q++
Sbjct: 388 DPLRPDAKETIEELKAAGIKVVMITGDNVLTAKAIAKELGIDVFARVSPEQKLQIVEA 445
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 140 bits (355), Expect = 5e-34
Identities = 164/777 (21%), Positives = 268/777 (34%), Gaps = 164/777 (21%)
Query: 48 YFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRY-----LSDKKANEKE 102
Y + + LW L + + I +S+T + Y L D +
Sbjct: 177 YVFQVFSVILWLL------DEYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVHKPQS 230
Query: 103 VWVVKQGIKKLIQSQDIRVGNIVWLRENDE--VPCDLVLIGTSDPQGVCYVETAALDGET 160
V V++ G I S ++ G+IV + +E +PCD VL+ G C V + L GE+
Sbjct: 231 VIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLL-----SGSCIVNESMLTGES 285
Query: 161 DLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKN 220
+P +K I G D + F+ +
Sbjct: 286 ------VPV------------LKFPIPDNGDDDED-----------LFLYETSKKHVLFG 316
Query: 221 --TILQSCYLRNTEWACGVAVYTGNET-KLGMTRGIPEPKLTAV----DAMIDKLTGAIF 273
ILQ + V TG T K + R I PK D+ L A+
Sbjct: 317 GTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVL 376
Query: 274 -VFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIP---- 328
+ + I+ L I LR + +I++P
Sbjct: 377 ALIGFIYTIIELIKDGR---------------------PLGKIILRSLDIITIVVPPALP 415
Query: 329 ----ISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTG 384
I I SL +K P N A +++ DKTG
Sbjct: 416 AELSIGINNSLARLKKKGIF-------CTSPFR------INFA-----GKIDVCCFDKTG 457
Query: 385 TLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAK 444
TLTE+ + R + G+ E + + L +A C+++ +
Sbjct: 458 TLTEDGLDLR--GVQGLSGNQEFLKIVTEDSSLK--------PSITHKALATCHSLTKLE 507
Query: 445 SK-AGAILYKAQSQD-----EEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETL 498
K G L K + EE +A+ +L + + I+
Sbjct: 508 GKLVGDPLDKKMFEATGWTLEED--DESAEPTSILAVV------RTDDPPQ-ELSIIRRF 558
Query: 499 EFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTL 558
+F+S +RMSV+V + KGA E I + E ++ Y++ G R L
Sbjct: 559 QFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTREGYRVL 618
Query: 559 CLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGV 618
LA++E+ + Q+ + ++A +E +L LG E+ L+
Sbjct: 619 ALAYKELPKLTLQKAQDLSRDA-----------------VESNLTFLGFIVFENPLKPDT 661
Query: 619 PETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLER 678
E I+ L++A I M+TGD TA+ +A C ++P +L+ E ++
Sbjct: 662 KEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNT-LILAEAEPPESGKPNQIKF 720
Query: 679 V----LLTMRITTSEP-------------KDVAFVVDGWALEIALKHYRKAFTELAILSR 721
+ P + G A + H + L LS
Sbjct: 721 EVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRL--LSH 778
Query: 722 TAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 778
T + R+ P QK LVELL+ DY GDG ND +++AD+G+ +S E AA
Sbjct: 779 TTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEAEASVAA 835
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 1e-24
Identities = 124/490 (25%), Positives = 172/490 (35%), Gaps = 114/490 (23%)
Query: 363 ATNTAISEDLAQVE------YILTDKTGTLTENRMIFRRC-------------CIGGIFY 403
A AI L VE I +DKTGTLT N+M + C+ G Y
Sbjct: 271 AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTY 330
Query: 404 GNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALV 463
G +KD G + + T+ A+CN ++ + K E AL
Sbjct: 331 -APEGGVIKDDGPVAG--GQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAAL- 386
Query: 464 HAAAQLHMVLVNK---NASILEIKFNG-------SVLQ--YEILETLEFTSDRKRMSVVV 511
VLV K A+ + SV ++ L TLEF+ DRK MSV+
Sbjct: 387 -------KVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLC 439
Query: 512 KDCHSGNISLLSKGADEAILPYAH------------AGQQTRTFVEAVEQYSQL-GLRTL 558
K S L KGA E +L + T + +++ LR L
Sbjct: 440 KP--STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCL 497
Query: 559 CLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGV 618
LA++ D + +E DL +GV + D + V
Sbjct: 498 ALAFK----DIPDPREEDLLSDPANFE-----------AIESDLTFIGVVGMLDPPRPEV 542
Query: 619 PETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLER 678
+ IE R AGI M+TGD + TA I SP+ S G+ D
Sbjct: 543 ADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFD-------- 594
Query: 679 VLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVE 738
E+ R A + SR PS K++LVE
Sbjct: 595 ------------------------EMGPAKQRAACRSAVLFSRV------EPSHKSELVE 624
Query: 739 LLKSCDYRTLAIGDGGNDVRMIQKADIGVGI-SGREGLQAARAADYSIGKFRFLKRLILV 797
LL+ GDG ND ++KADIG+ + SG E A A+D + F + V
Sbjct: 625 LLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTE--VAKEASDMVLADDNFATIVAAV 682
Query: 798 H-GRYSYNRT 806
GR YN
Sbjct: 683 EEGRAIYNNM 692
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 8e-23
Identities = 99/426 (23%), Positives = 158/426 (37%), Gaps = 118/426 (27%)
Query: 378 ILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVC 437
I +DKTGTLT+N M + IG + +L + +++ + +++
Sbjct: 381 ICSDKTGTLTQNVMSVVQGYIGEQRFNVR--------DVLRNVPKHVRNIL--VEGISLN 430
Query: 438 NTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILET 497
++ + G + S+ E AL L L+ + ++++
Sbjct: 431 SSSEEVVDRGGKRAFIG-SKTECAL------LDFGLLLLRD--YQEVRAEE----KVVKI 477
Query: 498 LEFTSDRKRMSVVVKDCHSGN-ISLLSKGADEAILP----YAHAGQQTRTFVEA------ 546
F S+RK MSVVVK HSG KGA E +L + + +
Sbjct: 478 YPFNSERKFMSVVVK--HSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCA 535
Query: 547 --VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKV 604
+E + LRT+CLA+R+ +E+ L +
Sbjct: 536 DVIEPLASDALRTICLAYRDFAPEEFPRKDYP----------------------NKGLTL 573
Query: 605 LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSI 664
+GV I+D L+ GV E ++ ++AGI M+TGD +TA IA +C ++
Sbjct: 574 IGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF--------- 624
Query: 665 DGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTEL------AI 718
G A+E K F L I
Sbjct: 625 ---------------------------------GGLAME------GKEFRSLVYEEMDPI 645
Query: 719 LSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG--VGISGREGLQ 776
L + + R +P K LV +LK GDG ND ++ AD+G +GISG E
Sbjct: 646 LPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTE--V 703
Query: 777 AARAAD 782
A A+D
Sbjct: 704 AKEASD 709
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 91.0 bits (226), Expect = 1e-18
Identities = 101/422 (23%), Positives = 158/422 (37%), Gaps = 94/422 (22%)
Query: 370 EDLAQVEYILTDKTGTLTENRMIFRRC-CIGGI------FYGNETGDALKDVGLLNAITS 422
E L V I +DKTGTLT+N M + G+ N+ G+ + D +L+ +
Sbjct: 319 ETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYT 378
Query: 423 GSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILE 482
V R L +CN +++A +L + AL+ + +
Sbjct: 379 --VAVSRILEAGNLCNNAK-FRNEADTLLGNPT---DVALIELLMKFGL----------- 421
Query: 483 IKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRT 542
+ Y + + F+S+RK M+V + KGA E +L Y
Sbjct: 422 ---DDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYC-------- 470
Query: 543 FVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHD- 601
Y + +TL L + + D QE + AS+ L R+ E
Sbjct: 471 -----TYYQKKDGKTLTLT--QQQRDVIQE--EAAEMASAGL-----RVIAFASGPEKGQ 516
Query: 602 LKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQL 661
L LG+ I D + GV E + TL G+ M+TGD Q TA+ IA S +
Sbjct: 517 LTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQ--- 573
Query: 662 LSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSR 721
S+ G+ D +D L I+ +
Sbjct: 574 -SVSGEKLDA-------------------------MDDQQLS-------------QIVPK 594
Query: 722 TAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-A 780
A+ R +P K ++V+ L+ GDG ND ++ ADIGV + G+ G A+ A
Sbjct: 595 VAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAM-GQTGTDVAKEA 653
Query: 781 AD 782
AD
Sbjct: 654 AD 655
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 75.1 bits (185), Expect = 8e-14
Identities = 93/423 (21%), Positives = 145/423 (34%), Gaps = 139/423 (32%)
Query: 366 TAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSP 425
TAI E+LA ++ + +DKTGTLT N++ + N G DV L A+ S
Sbjct: 278 TAI-EELAGMDILCSDKTGTLTLNKLSIDEIL----PFFN--GFDKDDVLLYAALASREE 330
Query: 426 DVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKF 485
D QD + ++ + E +
Sbjct: 331 D------------------------------QD---------AIDTAVLGSAKDLKEARD 351
Query: 486 NGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVE 545
Y++LE + F KR V+D +G ++KGA + IL ++ VE
Sbjct: 352 G-----YKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVE 406
Query: 546 A-VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKV 604
V++ + G R L +A DE W
Sbjct: 407 EKVDELASRGYRALGVA----RTDEEGRWHF----------------------------- 433
Query: 605 LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQ----NTAIQIALSCNFISPEPKGQ 660
LG+ + D + ETIE R G+ M+TGD TA ++ L N + +
Sbjct: 434 LGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTAD---V 490
Query: 661 LLSID--GKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAI 718
LL D + +E DG+A
Sbjct: 491 LLKGDNRDDLPSGLGEMVED------------------ADGFA----------------- 515
Query: 719 LSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 778
V P K ++VE+L+ + GDG ND ++KAD+G+ ++G AA
Sbjct: 516 --------EVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAG--ATDAA 565
Query: 779 RAA 781
R+A
Sbjct: 566 RSA 568
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 69.7 bits (170), Expect = 5e-12
Identities = 105/480 (21%), Positives = 166/480 (34%), Gaps = 120/480 (25%)
Query: 370 EDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKD-----VGLLNAITSGS 424
E L V I +DKTGT+T+ +MI R+ I +G + D D G ++ I S
Sbjct: 354 EALGAVNDICSDKTGTITQGKMIARQIWIPR--FGTISIDNSDDAFNPNEGNVSGIPRFS 411
Query: 425 P-----------DV----------------------IRFLTVMAVCNTVIPAKSKAGAIL 451
P D+ I+ L A+ N K A
Sbjct: 412 PYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATD-C 470
Query: 452 YKAQSQDEEALVHAAAQ----LHMVLV----------NKNASILEIKFNGSVLQYEILET 497
+KA E +H A+ H L N +S+ + Q+E +
Sbjct: 471 WKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAE 530
Query: 498 LEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP-----YAHAGQQTRTFVEA------ 546
F S+ KRM+ + +D H ++ +KGA E I+ G + +
Sbjct: 531 FPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELII 590
Query: 547 --VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKV 604
+E + GLR L A + ++ K + +R E DL+
Sbjct: 591 ANMESLAAEGLRVLAFASKSFDKA--DNNDDQLKNETL---NRA--------TAESDLEF 637
Query: 605 LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSI 664
LG+ I D ++ +E +AGIN MLTGD TA IA I P
Sbjct: 638 LGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPN-------- 689
Query: 665 DGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAI 724
I + + V+ G + A ++ + A+
Sbjct: 690 -------------------FIHDRDEIMDSMVMTGSQFD--------ALSDEEVDDLKAL 722
Query: 725 C---CRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAA 781
C R P K +++E L GDG ND ++ A++G+ + G G A+ A
Sbjct: 723 CLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM-GINGSDVAKDA 781
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 69.1 bits (169), Expect = 6e-12
Identities = 117/451 (25%), Positives = 182/451 (40%), Gaps = 106/451 (23%)
Query: 370 EDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNE--TGDALKDVGLLNAITSGSPDV 427
E L I +DKTGTLT+NRM + +++ N+ D +D + + S
Sbjct: 339 ETLGSTSTICSDKTGTLTQNRMT-----VAHMWFDNQIHEADTTEDQSGV-SFDKSSATW 392
Query: 428 IRFLTVMAVCN-TVIPAKSKAGAILYKAQSQD--EEAL---VHAAAQLHMVLVNKNASIL 481
+ + +CN V A + IL +A + D E AL + M + +N ++
Sbjct: 393 LALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVV 452
Query: 482 EIKFNGSVLQYEI-LETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA---- 536
EI FN S +Y++ + E D + + L+ KGA E IL +
Sbjct: 453 EIPFN-STNKYQLSIHENEDPRDPRHL-------------LVMKGAPERILERCSSILIH 498
Query: 537 GQQ-------TRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREW 589
G++ F A + LG R L + ++++ E + + D
Sbjct: 499 GKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTD--- 555
Query: 590 RIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS 649
+L +G+ ++ D + VP+ + R AGI M+TGD TA IA
Sbjct: 556 -----------NLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG 604
Query: 650 CNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE--PKDV-AFVVDGWAL---- 702
IS E ++E + + I S+ P+D A VV G L
Sbjct: 605 VGIIS----------------EGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMT 648
Query: 703 -----EIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAI----GDG 753
EI H TE+ + +RT +P QK +VE C R AI GDG
Sbjct: 649 SEQLDEILKYH-----TEI-VFART------SPQQKLIIVE---GCQ-RQGAIVAVTGDG 692
Query: 754 GNDVRMIQKADIGV--GISGREGLQAARAAD 782
ND ++KADIGV GI+G + + +AAD
Sbjct: 693 VNDSPALKKADIGVAMGIAGSDV--SKQAAD 721
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 65.0 bits (159), Expect = 8e-11
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Query: 724 ICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY 783
+ RV+P QK Q+VE L+ + GDG ND ++KAD+G+ + + AAD
Sbjct: 430 VFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAMGAKA------AADI 483
Query: 784 SIGKFRFLK-RLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIL 826
+ + GR ++ ++ +L++ + +L
Sbjct: 484 VLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALL 527
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 9e-11
Identities = 70/293 (23%), Positives = 109/293 (37%), Gaps = 82/293 (27%)
Query: 491 QYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADE---AILPYAHAGQQTRTFVEAV 547
Y ++ L F R+R+SVVV+D G L+ KGA E A+ + G R EA
Sbjct: 438 GYRKVDELPFDFVRRRLSVVVEDAQ-GQHLLICKGAVEEMLAVATHVRDGDTVRPLDEAR 496
Query: 548 --------EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLE 599
E Y+ G R L +A RE+ E ++ A+ E
Sbjct: 497 RERLLALAEAYNADGFRVLLVATREIPGGE---------------SRAQYSTAD-----E 536
Query: 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKG 659
DL + G D ++ I LR+ G+ +LTGD I A C + EP
Sbjct: 537 RDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGD---NPIVTAKICREVGLEPGE 593
Query: 660 QLL--SIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELA 717
LL I+ + + R +E
Sbjct: 594 PLLGTEIEAMDDAALAREVE---------------------------------------- 613
Query: 718 ILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770
+ ++TP QK+++++ L++ + +GDG ND ++ AD VGIS
Sbjct: 614 ---ERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDAD--VGIS 661
|
Length = 903 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 2e-10
Identities = 64/287 (22%), Positives = 112/287 (39%), Gaps = 82/287 (28%)
Query: 498 LEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYA----HAG------QQTRTFVEAV 547
+ F DR+R+SVVV++ + L+ KGA E +L G + ++ ++ +
Sbjct: 412 IPFDFDRRRLSVVVEN-RAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDM 470
Query: 548 -EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLG 606
+ ++ G+R + +A + +L EA T D E L + G
Sbjct: 471 TAEMNRQGIRVIAVATK----------TLKVGEADFTKTD------------EEQLIIEG 508
Query: 607 VTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLL--SI 664
D ++ E I L K GIN +LTGD + +I C + + LL I
Sbjct: 509 FLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARI---CQEVGIDANDFLLGADI 565
Query: 665 DGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAI 724
+ +++E+ R L + I
Sbjct: 566 EELSDEELARELR-------------------------------------------KYHI 582
Query: 725 CCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771
R+TP QK++++ LLK + +GDG ND ++KAD+G+ +
Sbjct: 583 FARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDT 629
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 8e-10
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 491 QYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPY 533
+Y + + F S+RKRMS V K L KGA E IL
Sbjct: 45 RYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAPERILER 87
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 54.5 bits (132), Expect = 3e-08
Identities = 38/220 (17%), Positives = 79/220 (35%), Gaps = 66/220 (30%)
Query: 73 LIFIFAVSATKEAWDDYNRYLSDKK----ANEKEVWVVKQGIKKLIQSQDIRVGNIVWLR 128
++ + ++A EA+ +Y + K V++ G ++ I + ++ VG+IV L+
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 129 ENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIEC 188
D VP D +I +G V+ +AL GE+ +
Sbjct: 62 PGDRVPADGRII-----EGSLEVDESALTGESLPVEK----------------------- 93
Query: 189 PGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLG 248
+ +T+ + + E + TG +T+LG
Sbjct: 94 ----------------------------SRGDTVFAGTVVLSGE-LKVIVTATGEDTELG 124
Query: 249 -MTRGI--PEPKLTAVDAMIDKLTG--AIFVFQIVVVIVL 283
+ R + + T + ++DKL V + +++ L
Sbjct: 125 KIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFL 164
|
Length = 222 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 3e-07
Identities = 70/307 (22%), Positives = 123/307 (40%), Gaps = 89/307 (28%)
Query: 492 YEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYA----HAGQQ---TRTFV 544
++ ++ + F +R+RMSVVV + ++ + L+ KGA E IL H G+ +
Sbjct: 441 WQKIDEIPFDFERRRMSVVVAE-NTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIML 499
Query: 545 EAVEQ----YSQLGLRTLCLAWREV--EEDEYQEWSLMFKEASSTLIDREWRIAEVCQRL 598
+++ ++ GLR + +A + + E +YQ D
Sbjct: 500 RRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQ------------RAD------------ 535
Query: 599 EHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPK 658
E DL + G A D ++ ++ L+ +G+ +LTGD + A ++ C+ + +
Sbjct: 536 ESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKV---CHEVGLDAG 592
Query: 659 GQLLS--IDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTEL 716
L+ I+ ++DE+ E
Sbjct: 593 EVLIGSDIETLSDDELANLAE--------------------------------------- 613
Query: 717 AILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 776
RT + R+TP K ++V LLK + +GDG ND ++ ADI GIS +
Sbjct: 614 ----RTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADI--GISVDGAVD 667
Query: 777 AAR-AAD 782
AR AAD
Sbjct: 668 IAREAAD 674
|
Length = 902 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 50.3 bits (120), Expect = 3e-06
Identities = 59/227 (25%), Positives = 91/227 (40%), Gaps = 62/227 (27%)
Query: 491 QYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA--GQQTRTFVEAVE 548
Q +EFT+ + RMS + D N ++ KGA +AI + A G +AV+
Sbjct: 365 QSLHATFVEFTA-QTRMSGINLD----NGRMIRKGAVDAIKRHVEANGGHIPTDLDQAVD 419
Query: 549 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVT 608
Q ++ G L VC+ D ++ GV
Sbjct: 420 QVARQGGTPLV----------------------------------VCE----DNRIYGVI 441
Query: 609 AIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC---NFIS---PEPK---- 658
++D ++ G+ E LRK GI M+TGD + TA IA +FI+ PE K
Sbjct: 442 YLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIAEATPEDKIALI 501
Query: 659 ------GQLLSIDGK-TEDEVCRSLERVLLTMRITTSEPKDVAFVVD 698
G+L+++ G T D + V + M T K+ A +VD
Sbjct: 502 RQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVD 548
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 4e-06
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 603 KVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
K++GV A+ D L+ E I L+ GI MLTGD + TA IA
Sbjct: 527 KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIA 571
|
Length = 713 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 4e-05
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 603 KVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
++ GV A+ D+L+ E I+ L++ GI MLTGD + TA +A
Sbjct: 404 ELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVA 448
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 7e-05
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 603 KVLGVTAIEDRLQDGVPETIETLRKAG-INFWMLTGDKQNTAIQIA 647
++LGV A+ D+L+ E I L++AG I MLTGD ++ A +A
Sbjct: 374 ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVA 419
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 1e-04
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
+ ++LGV ++D ++ G+ E LRK GI M+TGD TA IA
Sbjct: 434 ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA 481
|
Length = 681 |
| >gnl|CDD|237437 PRK13582, thrH, phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 2e-04
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 730 PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767
P K Q V+ LKS YR +A GD ND M+ +AD G+
Sbjct: 130 PDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGI 167
|
Length = 205 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 2e-04
Identities = 46/232 (19%), Positives = 68/232 (29%), Gaps = 66/232 (28%)
Query: 540 TRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQE---WSLMFKEASSTLIDREWRIAEVCQ 596
V E + L +A + + L+ + L E +
Sbjct: 15 GEPVVPEAEALLEA-AAALGVAIVIAAGENLTKEGREELVRRLLLRALAGEELLEELLRA 73
Query: 597 RLE----HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652
DL VLG+ A+ D L G E ++ L++AGI +LTGD + TA IA
Sbjct: 74 GATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIA----- 128
Query: 653 ISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKA 712
+LL + D D + L K K
Sbjct: 129 -------RLLGLF--------------------------DALVSADLYGLVGVGKPDPKI 155
Query: 713 FTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKAD 764
F +E L L +GDG ND+ + A
Sbjct: 156 F--------------------ELALEELGVKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 2e-04
Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 25/180 (13%)
Query: 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRS 675
+ V E IE L++ ++ + T D E + +
Sbjct: 82 EDVKEIIEYLKENNLSILLYTDDG--------AYILNDVSEKIVREERYVKSFVLVIDDF 133
Query: 676 LERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTA-ICCRVTP--SQ 732
+ + + V D L+ K ++ F L ++ + + P
Sbjct: 134 EL-------LEDEDINKILIVTDPEDLDELEKELKELFGSLITITSSGPGYLEIMPKGVS 186
Query: 733 KA----QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI-SGREGLQAARAADYSIGK 787
K L + L +A GDG ND+ M++ A +GV + + ++A AADY G
Sbjct: 187 KGTALKALAKHLGIDLEEVIAFGDGENDIEMLELAGLGVAMGNASPEVKA--AADYVTGS 244
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 9e-04
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
+ VLG+ A++D L+ + I L+ GI MLTGD A IA
Sbjct: 555 RNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIA 602
|
Length = 741 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.001
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 730 PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL--QAARAADYSI 785
P KA+++ LK + + +G+G ND+ +++AD+G+ +EG+ + AD +
Sbjct: 79 PEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVL 136
|
Length = 152 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 42.1 bits (100), Expect = 0.001
Identities = 39/154 (25%), Positives = 59/154 (38%), Gaps = 46/154 (29%)
Query: 496 ETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPY--AHAGQQTRTFVEAVEQYSQL 553
+ F++ + RMS V D + KGA +AI Y ++ G AV++ ++
Sbjct: 370 TFVPFSA-QTRMSGVDLDGRE-----IRKGAVDAIRRYVESNGGHFPAELDAAVDEVARK 423
Query: 554 GLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDR 613
G L +A D +VLGV ++D
Sbjct: 424 GGTPLVVA--------------------------------------EDNRVLGVIYLKDI 445
Query: 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
++ G+ E LRK GI M+TGD TA IA
Sbjct: 446 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA 479
|
Length = 679 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 0.001
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGI-NFWMLTGDKQNTAIQIA 647
D LG + D + E I L+ GI MLTGD++ A ++A
Sbjct: 350 DGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVA 397
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.002
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 747 TLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787
T+A+GDG ND+ MI+ A +G+ + + LQ + AD I K
Sbjct: 171 TVAVGDGANDLSMIKAAGLGIAFNAKPKLQ--QKADICINK 209
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.003
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 94 SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVET 153
S K ++ V++ G K I ++ + VG++V ++ D +P DL +I C V+
Sbjct: 134 SFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDN 189
Query: 154 AALDGETDLKTR 165
++L GE++ +TR
Sbjct: 190 SSLTGESEPQTR 201
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.004
Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 733 KAQLVELLKSCDY---RTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789
L EL T+A GD ND+ M++ A + + ++ + L+A R
Sbjct: 146 AKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKLRALADVRIWPIDLR 205
Query: 790 FLKRLI 795
+ L+
Sbjct: 206 AVLYLL 211
|
Length = 212 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 826 | |||
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.97 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.86 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.64 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.63 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.63 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.62 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.56 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.54 | |
| PLN02887 | 580 | hydrolase family protein | 99.54 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.53 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.51 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.5 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.49 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.48 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.45 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.42 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.38 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.26 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.23 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.16 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.15 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.11 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.09 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.04 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 99.01 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.0 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.98 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.97 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.96 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.92 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.91 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.83 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.83 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 98.82 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 98.76 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.71 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.57 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 98.53 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.47 | |
| PLN02423 | 245 | phosphomannomutase | 98.45 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.44 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 98.4 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.38 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.24 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.22 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.14 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.12 | |
| PLN02580 | 384 | trehalose-phosphatase | 98.12 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.09 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.02 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 98.02 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.01 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.98 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.98 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.98 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.96 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.92 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.9 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.88 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.88 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 97.79 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.7 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.7 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.67 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.66 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.64 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.62 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.59 | |
| PLN03017 | 366 | trehalose-phosphatase | 97.58 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.58 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.52 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.52 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.48 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 97.46 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 97.46 | |
| PRK06769 | 173 | hypothetical protein; Validated | 97.44 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 97.44 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 97.27 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 97.25 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 97.24 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 97.1 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.09 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.07 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 97.06 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 97.05 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.98 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.98 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.98 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.96 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.95 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.94 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 96.93 | |
| PLN02940 | 382 | riboflavin kinase | 96.9 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.86 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 96.82 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 96.77 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 96.71 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.59 | |
| PLN02811 | 220 | hydrolase | 96.55 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 96.54 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.5 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 96.45 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 96.41 | |
| PLN02151 | 354 | trehalose-phosphatase | 96.4 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 96.4 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 96.39 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 96.37 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 96.3 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 96.21 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.05 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 95.99 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 95.95 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 95.82 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 95.69 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 95.67 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 95.58 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 95.4 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.27 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 95.27 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 95.1 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 94.92 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 94.83 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 94.72 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 94.7 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 94.62 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 94.61 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 94.42 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 94.4 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 93.97 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 93.95 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 93.36 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 92.95 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 92.66 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 92.52 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 92.33 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 91.29 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 91.28 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 90.3 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 90.0 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 89.8 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 89.29 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 88.75 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 88.48 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 88.38 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 88.34 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 88.2 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 87.12 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 87.08 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 86.84 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 84.68 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 84.6 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 84.28 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 84.1 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 82.92 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 82.48 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 82.05 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 81.57 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 81.05 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 80.28 |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-125 Score=1127.27 Aligned_cols=816 Identities=36% Similarity=0.619 Sum_probs=696.6
Q ss_pred ceEEEeCCCcc--ccccCCCceEEeecccccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhh
Q 003364 2 KRYIYINDDET--SQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAV 79 (826)
Q Consensus 2 ~r~~~~~~~~~--r~~~~g~N~i~~~~~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~ 79 (826)
.|.||+|+.+. .+.+|+.|.+.++||++|+|+|+.+|+||++++|+|||+++++++++.+.+.++.++++|+++++++
T Consensus 70 ~r~i~~~~~~~~~~~~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl~v 149 (1178)
T PLN03190 70 ARLVYLNDPEKSNERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLLV 149 (1178)
T ss_pred ceEEEcCCCCcccccccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHHHH
Confidence 59999998643 3447999999999999999999999999999999999999999999999998899999999999999
Q ss_pred hhhHHHHHHHHhhhhhHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCC
Q 003364 80 SATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (826)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGE 159 (826)
+++.+++++++|++++++.|++.++|+|+|++++++|++|+|||+|.|++||++||||+|++|++++|.|+||||+||||
T Consensus 150 ~~ike~~Ed~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGE 229 (1178)
T PLN03190 150 TAVKDAYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGE 229 (1178)
T ss_pred HHHHHHHHHHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999899999999999999
Q ss_pred CCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEE
Q 003364 160 TDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (826)
Q Consensus 160 s~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~ 239 (826)
|.|+.|.+.+.+... .....++++.++|+.|++++++|+|.+++.. ...+++.+|++++||.+++++|++|+|+
T Consensus 230 t~~k~k~~~~~~~~~-~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~-----~~~~l~~~n~llRG~~LrnT~~i~GvVV 303 (1178)
T PLN03190 230 SNLKTRYAKQETLSK-IPEKEKINGLIKCEKPNRNIYGFQANMEVDG-----KRLSLGPSNIILRGCELKNTAWAIGVAV 303 (1178)
T ss_pred eeeeEecccchhhhc-chhhhhceEEEEEeCCCccceeEEEEEEECC-----CcccCCccceeeccceecCCceEEEEEE
Confidence 999999887655422 1234567899999999999999999998753 3456789999999999999999999999
Q ss_pred EeCCcceeeccCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCC-------C-----
Q 003364 240 YTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQE-------F----- 307 (826)
Q Consensus 240 ~tG~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-------~----- 307 (826)
|||++|+++++....+.|.+++++.+|+++.+++++.+++++++++++..|........||+.+... .
T Consensus 304 YTG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 383 (1178)
T PLN03190 304 YCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNY 383 (1178)
T ss_pred EechhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccc
Confidence 9999999999988888899999999999999999988888888777665554322223344321100 0
Q ss_pred -cc-chhhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcc
Q 003364 308 -PW-YELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGT 385 (826)
Q Consensus 308 -~~-~~~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGT 385 (826)
.+ ...++.+.++++++..+||++|++++++++..++++|++|.+|++...+.++.+|+.++.|+||+|++||+|||||
T Consensus 384 ~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGT 463 (1178)
T PLN03190 384 YGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGT 463 (1178)
T ss_pred chhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCc
Confidence 01 1224445556678889999999999999999999999999999999988889999999999999999999999999
Q ss_pred cccceeeEEEEEEcCeeecCCCCCc----------------------ccchhhhhhhcc-----CCchHHHHHHHhhhce
Q 003364 386 LTENRMIFRRCCIGGIFYGNETGDA----------------------LKDVGLLNAITS-----GSPDVIRFLTVMAVCN 438 (826)
Q Consensus 386 LT~~~~~v~~i~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~-----~~~~~~~~~~~l~~c~ 438 (826)
||+|+|.+++|++++..|+.+.... ..+..+...... ..+.+.+++.++++||
T Consensus 464 LT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalCh 543 (1178)
T PLN03190 464 LTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACN 543 (1178)
T ss_pred cccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcC
Confidence 9999999999999998886431100 001111111100 0123567999999999
Q ss_pred eeecccCC---C---CceeeecCCccHHHHHHHHHhCCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEE
Q 003364 439 TVIPAKSK---A---GAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVK 512 (826)
Q Consensus 439 ~~~~~~~~---~---~~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~ 512 (826)
++.+...+ + +...|.+++|+|.||+++|++.|+.+.+++++.+.++..+....|++++.+||+|+||||||+++
T Consensus 544 tv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~ 623 (1178)
T PLN03190 544 TIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILG 623 (1178)
T ss_pred CceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEE
Confidence 99875211 2 23568899999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCeEEEEecCchhhhhhhhhcC---CChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHH
Q 003364 513 DCHSGNISLLSKGADEAILPYAHAG---QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREW 589 (826)
Q Consensus 513 ~~~~~~~~~~~KGa~e~i~~~~~~~---~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~ 589 (826)
.+ ++++++|+|||||.|+++|+.. ..++++.+.+++|+.+|+||+++|||.++++++.+|...|.++...+.+++.
T Consensus 624 ~~-~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~ 702 (1178)
T PLN03190 624 CP-DKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAA 702 (1178)
T ss_pred cC-CCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHH
Confidence 75 5779999999999999999742 3456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCH
Q 003364 590 RIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE 669 (826)
Q Consensus 590 ~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~ 669 (826)
.+++..+.+|+||+++|+++++|++|++++++|++|+++||++||+|||+..+|.++|++||++.++.. .+.++....
T Consensus 703 ~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~--~i~i~~~~~ 780 (1178)
T PLN03190 703 LLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMT--QIIINSNSK 780 (1178)
T ss_pred HHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCe--eEEecCCch
Confidence 999999999999999999999999999999999999999999999999999999999999999987654 444444433
Q ss_pred HHHHHHHHHHHHH---cc-----------cccCCCCceEEEEcChhHHHHHH-HHHHHHhhhccccceeEEEEeCcccHH
Q 003364 670 DEVCRSLERVLLT---MR-----------ITTSEPKDVAFVVDGWALEIALK-HYRKAFTELAILSRTAICCRVTPSQKA 734 (826)
Q Consensus 670 ~~~~~~~~~~~~~---~~-----------~~~~~~~~~~l~~~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~p~~K~ 734 (826)
+.....++..... .. ..........++++|..+..+.+ ...+.|.++...++..+|||++|.||+
T Consensus 781 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa 860 (1178)
T PLN03190 781 ESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKA 860 (1178)
T ss_pred hhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHH
Confidence 3332222221110 00 00112345789999999998875 455667777666777899999999999
Q ss_pred HHHHHhhcC-CCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccchhcchhheeecchhhHHHHHHHHHHH
Q 003364 735 QLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYS 813 (826)
Q Consensus 735 ~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~~~l~~l~l~~gr~~~~~~~~~~~~~ 813 (826)
++|+.+++. ++.|+|+|||.||++||++|||||+++|.+|.+++.+|||++..|++|.+++|+|||++|.|+.+++.|+
T Consensus 861 ~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~ 940 (1178)
T PLN03190 861 GIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYN 940 (1178)
T ss_pred HHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 999999987 5789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHhhhC
Q 003364 814 FYKSLLICFIQIL 826 (826)
Q Consensus 814 ~~~~~~~~~~~~~ 826 (826)
||||++++++||+
T Consensus 941 fYKN~~~~~~qf~ 953 (1178)
T PLN03190 941 FYRNAVFVLVLFW 953 (1178)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999984
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-121 Score=1106.83 Aligned_cols=803 Identities=42% Similarity=0.715 Sum_probs=685.2
Q ss_pred CCCceEEeecccccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHHHHHhhhhhH
Q 003364 17 YCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDK 96 (826)
Q Consensus 17 ~g~N~i~~~~~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~ 96 (826)
|++|++.++||++|+|+|+.||+||++++|+|||+++++++++.+++.++.++++|++++++++++.+++++++|+++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 68999999999999999999999999999999999999999999888889999999999999999999999999999999
Q ss_pred hhcceEEEEEeC-CeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeeeccccccCC-
Q 003364 97 KANEKEVWVVKQ-GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGM- 174 (826)
Q Consensus 97 ~~~~~~~~V~r~-g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~~~~~~~~~- 174 (826)
+.|+++|+|+|+ |++++++|++|+|||||.|++||++|||++|++|++++|.|+||||+|||||.|+.|.+.+.+...
T Consensus 81 ~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~ 160 (1057)
T TIGR01652 81 EVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKML 160 (1057)
T ss_pred HHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhccC
Confidence 999999999997 899999999999999999999999999999999998889999999999999999999987655432
Q ss_pred CHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcceeeccCCCC
Q 003364 175 DFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRGIP 254 (826)
Q Consensus 175 ~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T~~~~~~~~~ 254 (826)
.......+++.++|+.|+.+.++|+|++++.+. +..+++.+|++++||.+++++|++|+|++||++|+++++....
T Consensus 161 ~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~----~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~ 236 (1057)
T TIGR01652 161 DEDDIKNFSGEIECEQPNASLYSFQGNMTINGD----RQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQA 236 (1057)
T ss_pred ChhhHhhceEEEEEcCCCCcceEEEEEEEECCC----CcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCC
Confidence 344566789999999999999999999998542 4567899999999999999889999999999999999988888
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCC--CccchhhhhhhHHHHHhcccccceeh
Q 003364 255 EPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQE--FPWYELLVIPLRFELLCSIMIPISIK 332 (826)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~iP~~l~ 332 (826)
+.|.+++++.+++++.+++.++++++++.+++...|........||+..... ......++.+..++.+++.++|++|+
T Consensus 237 ~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL~ 316 (1057)
T TIGR01652 237 PSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISLY 316 (1057)
T ss_pred cccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcceeee
Confidence 8899999999999999988888888877777655554333333577643211 11223344456677789999999999
Q ss_pred hhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCeeecCCCCCc--
Q 003364 333 VSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDA-- 410 (826)
Q Consensus 333 v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~-- 410 (826)
+++++++.++++|+++|.+|++++.+.++.+|+.+++|+||+|++||+|||||||+|+|.++++++++..|+......
T Consensus 317 v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~ 396 (1057)
T TIGR01652 317 VSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKD 396 (1057)
T ss_pred ehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHH
Confidence 999999999999999999999888777899999999999999999999999999999999999999998886431100
Q ss_pred ------------------------ccchhhhhhhc---cCCchHHHHHHHhhhceeeeccc--CCCCceeeecCCccHHH
Q 003364 411 ------------------------LKDVGLLNAIT---SGSPDVIRFLTVMAVCNTVIPAK--SKAGAILYKAQSQDEEA 461 (826)
Q Consensus 411 ------------------------~~~~~~~~~~~---~~~~~~~~~~~~l~~c~~~~~~~--~~~~~~~~~~~~~~e~a 461 (826)
..+.++..... ..++...+++.++++||++.+.. ++++.+.|.++||+|.|
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~A 476 (1057)
T TIGR01652 397 AIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAA 476 (1057)
T ss_pred HhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHH
Confidence 00111111111 11234678999999999998774 22234778899999999
Q ss_pred HHHHHHhCCeEEEeecCc--eEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhc--C
Q 003364 462 LVHAAAQLHMVLVNKNAS--ILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA--G 537 (826)
Q Consensus 462 ll~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~--~ 537 (826)
++++|+..|+.+.+++.+ .+.++..+....|++++.+||+|+||||||+++++ ++++++|+|||||.|+++|.. +
T Consensus 477 Ll~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~-~~~~~l~~KGA~e~il~~~~~~~~ 555 (1057)
T TIGR01652 477 LVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNP-DGRIKLLCKGADTVIFKRLSSGGN 555 (1057)
T ss_pred HHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeC-CCeEEEEEeCcHHHHHHHhhccch
Confidence 999999999999998877 55566677788999999999999999999999986 467899999999999999974 2
Q ss_pred CChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCc
Q 003364 538 QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDG 617 (826)
Q Consensus 538 ~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~ 617 (826)
..++++.+++++++.+|+||+++|||.++++++.+|.++|.++...+.+++..+++..+.+|+||+|+|+++++|++|++
T Consensus 556 ~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~ 635 (1057)
T TIGR01652 556 QVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEG 635 (1057)
T ss_pred hHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhc
Confidence 34567889999999999999999999999999999999999999998899988888889999999999999999999999
Q ss_pred hHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHH---HHHHHHHHHcc---cccCCCC
Q 003364 618 VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVC---RSLERVLLTMR---ITTSEPK 691 (826)
Q Consensus 618 ~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~ 691 (826)
++++|++|+++||++||+|||+..||.++|++||+++++.. ++.+++...++.. ..+........ .......
T Consensus 636 v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~--~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 636 VPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNME--QIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred cHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCe--EEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 99999999999999999999999999999999999987554 4555554433221 11111110000 0112245
Q ss_pred ceEEEEcChhHHHHHHH-HHHHHhhhccccceeEEEEeCcccHHHHHHHhhcC-CCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 692 DVAFVVDGWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
...++++|..++.+.+. .+++|..+...++..+|||++|+||+++|+.+|.. ++.|+|+|||.||++||++|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 67899999999877654 35567766666777899999999999999999997 99999999999999999999999999
Q ss_pred cCCchHHHHhhccccccchhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHhhhC
Q 003364 770 SGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIL 826 (826)
Q Consensus 770 ~gn~~~~~~~~Ad~v~~~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (826)
.|.++.+++.+||+++.+|+.|.++++.|||++|+|+++++.|.||+|+++++++|+
T Consensus 794 ~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~ 850 (1057)
T TIGR01652 794 SGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFW 850 (1057)
T ss_pred cChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888899999999999999999888999999999999999999999999998863
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-117 Score=1015.07 Aligned_cols=812 Identities=44% Similarity=0.737 Sum_probs=709.4
Q ss_pred ceEEEeCCC---ccccccCCCceEEeecccccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhh
Q 003364 2 KRYIYINDD---ETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFA 78 (826)
Q Consensus 2 ~r~~~~~~~---~~r~~~~g~N~i~~~~~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~ 78 (826)
.|.+|.|+. +.+..+|..|++.++||++++|+|+.+|+||+++.|+|||+++++++++ +.+.+++.+++|+++++.
T Consensus 14 ~R~~~~n~~~~~~~~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~~~~~~~~pl~~vl~ 92 (1151)
T KOG0206|consen 14 SRVVYCNDPLPFEAPQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPFNPYTTLVPLLFVLG 92 (1151)
T ss_pred ceEEeCCCCCcchhhhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccccCccceeeceeeeeh
Confidence 489999984 4466799999999999999999999999999999999999999999999 779999999999999999
Q ss_pred hhhhHHHHHHHHhhhhhHhhcceEEEEEeCCe-EEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCC
Q 003364 79 VSATKEAWDDYNRYLSDKKANEKEVWVVKQGI-KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALD 157 (826)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~r~g~-~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lT 157 (826)
+++++++++|++|++.|+++|+.+|.|.|++. +++..|++|+|||+|.+..++.+|||.+|++|++++|.|+|++++|+
T Consensus 93 ~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLD 172 (1151)
T KOG0206|consen 93 ITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLD 172 (1151)
T ss_pred HHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecC
Confidence 99999999999999999999999999999644 89999999999999999999999999999999999999999999999
Q ss_pred CCCCceeeeccccccCC-CHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEE
Q 003364 158 GETDLKTRLIPAACMGM-DFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACG 236 (826)
Q Consensus 158 GEs~p~~K~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~ 236 (826)
||++++.|++...+... .......+++.++|+.|+.+.+.|.|++..... ..++..+|.+++|+.+++++|++|
T Consensus 173 GEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~-----~~pl~~~~~Llrg~~lrNT~~v~G 247 (1151)
T KOG0206|consen 173 GETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQ-----IYPLSPDNLLLRGSRLRNTEWVYG 247 (1151)
T ss_pred CccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccC-----CCCCcHHHcccCCceeccCcEEEE
Confidence 99999999987665553 344577889999999999999999999984321 118899999999999999999999
Q ss_pred EEEEeCCcceeeccCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccc---cccceeeCCCCCccchhh
Q 003364 237 VAVYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEA---RKQWYVLYPQEFPWYELL 313 (826)
Q Consensus 237 ~V~~tG~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 313 (826)
+|++||++|+++++....+.|++.+++..|+....++++.++++++..+...+|..... ...||+.... .....+
T Consensus 248 ~vv~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 325 (1151)
T KOG0206|consen 248 VVVFTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSE--AAYAGF 325 (1151)
T ss_pred EEEEcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCch--HHHHHH
Confidence 99999999999999999999999999999999999888888888887776655554221 1345554322 223445
Q ss_pred hhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeE
Q 003364 314 VIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIF 393 (826)
Q Consensus 314 ~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v 393 (826)
..+.++.+++..++|++|++++.+.+..++.|+++|.+|++.+.+.++.+|+.+..|+||+|++|++|||||||+|.|.+
T Consensus 326 ~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F 405 (1151)
T KOG0206|consen 326 VHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEF 405 (1151)
T ss_pred HHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeee
Confidence 55667778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCeeecCCCCCc---------------------ccchhhhhhhcc---CCchHHHHHHHhhhceeeecccC-CCC
Q 003364 394 RRCCIGGIFYGNETGDA---------------------LKDVGLLNAITS---GSPDVIRFLTVMAVCNTVIPAKS-KAG 448 (826)
Q Consensus 394 ~~i~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~---~~~~~~~~~~~l~~c~~~~~~~~-~~~ 448 (826)
.+|++++..|+....+. ..+..+.+.... ..+...+++.++++||++.+..+ +++
T Consensus 406 ~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~ 485 (1151)
T KOG0206|consen 406 KKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSG 485 (1151)
T ss_pred ecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCcc
Confidence 99999999888753221 011111111111 34557789999999999999884 444
Q ss_pred ceeeecCCccHHHHHHHHHhCCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchh
Q 003364 449 AILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADE 528 (826)
Q Consensus 449 ~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e 528 (826)
++.|.+.+|+|.|+++.|+..|+.+..+.++.+.+...+....|+++..++|+|.|||||||||.+ +|+..+|||||+.
T Consensus 486 ~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p-~g~i~LycKGADs 564 (1151)
T KOG0206|consen 486 KLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDP-DGRILLYCKGADS 564 (1151)
T ss_pred ceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcC-CCcEEEEEcCcch
Confidence 899999999999999999999999999999999888767678999999999999999999999998 6799999999999
Q ss_pred hhhhhhhcCC--ChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEE
Q 003364 529 AILPYAHAGQ--QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLG 606 (826)
Q Consensus 529 ~i~~~~~~~~--~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG 606 (826)
+|.+++..++ ..+.-.+++++|+.+|+|++|+|||.++++|+.+|.++|.++..++.+|++.+++.++.+|+||+++|
T Consensus 565 vI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLG 644 (1151)
T KOG0206|consen 565 VIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLG 644 (1151)
T ss_pred hhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhc
Confidence 9999998532 34556689999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCC------HHHHH-------
Q 003364 607 VTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKT------EDEVC------- 673 (826)
Q Consensus 607 ~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~------~~~~~------- 673 (826)
..++||+++++++++|.+|++||||+|++|||..+||..++..|++..++.. .+.++... .+...
T Consensus 645 ATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~--~i~i~~~~~~~~~~~~~~~~~~~~l~ 722 (1151)
T KOG0206|consen 645 ATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMK--LIIINTETSEELSSLDATAALKETLL 722 (1151)
T ss_pred ceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCce--EEEEecCChhhhcchhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998776 33333322 11111
Q ss_pred HHHHHHHHHcccccCCCCceEEEEcChhHHHHHHH-HHHHHhhhccccceeEEEEeCcccHHHHHHHhhc-CCCeEEEEc
Q 003364 674 RSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIG 751 (826)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~-~~~~v~~iG 751 (826)
................ ...+++++|+.+...++. .+..|..+...++..++||++|.||+.+|+..+. .+..++|||
T Consensus 723 ~~~~~~~~~~~~~~~~-~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIG 801 (1151)
T KOG0206|consen 723 RKFTEELEEAKLEHSE-KPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIG 801 (1151)
T ss_pred HhhhHHHHHHhhccCc-CCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEee
Confidence 1111111111111111 479999999999887765 5568888888999999999999999999999975 578999999
Q ss_pred CCcccHHhHHhCCccEEecCCchHHHHhhccccccchhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHhhh
Q 003364 752 DGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825 (826)
Q Consensus 752 Dg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (826)
||.||++|++.|||||.++|.+|.++..+||+.+..|++|++++|+|||++|.|+++++.|+||||+.+++++|
T Consensus 802 DGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~f 875 (1151)
T KOG0206|consen 802 DGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLF 875 (1151)
T ss_pred CCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-108 Score=861.87 Aligned_cols=767 Identities=36% Similarity=0.597 Sum_probs=675.8
Q ss_pred cccccCCCceEEeecccccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHHHHHh
Q 003364 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNR 91 (826)
Q Consensus 12 ~r~~~~g~N~i~~~~~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~ 91 (826)
.++++|.+|.+.+.||++++|+|..+++||+.|.|+|||+.++.++++.+.-....++|.|+.+++.++.+.+++++++|
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999999999999999999999999999999999887777778899999999999999999999999
Q ss_pred hhhhHhhcceEEEEE-eCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeeecccc
Q 003364 92 YLSDKKANEKEVWVV-KQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAA 170 (826)
Q Consensus 92 ~~~~~~~~~~~~~V~-r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~~~~~ 170 (826)
++.++..|+...+++ |+|-... |+++|++||+|.+.++++||||++||.+++++|+|++.+..|+||+..+.|.|.+.
T Consensus 154 ~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKLrl~vp~ 232 (1051)
T KOG0210|consen 154 RRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKLRLPVPR 232 (1051)
T ss_pred HHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccceeeccchh
Confidence 999999999999887 5665444 99999999999999999999999999999999999999999999999999999988
Q ss_pred ccCCCHh-hhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcceeec
Q 003364 171 CMGMDFE-LLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGM 249 (826)
Q Consensus 171 ~~~~~~~-~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T~~~~ 249 (826)
++..+.+ .++.++ +-.+.|+.++++|-|++++.. +.++.+++.+|+++++|.+.+| .++|+|+|||.+|+..+
T Consensus 233 tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d---~~~~~~LsventLWanTVvAs~-t~~gvVvYTG~dtRsvM 306 (1051)
T KOG0210|consen 233 TQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITD---SDKPESLSVENTLWANTVVASG-TAIGVVVYTGRDTRSVM 306 (1051)
T ss_pred hccCCcccchheEE--EeccCcchhhHhhEEEEEEec---CCCCCcccccceeeeeeeEecC-cEEEEEEEecccHHHHh
Confidence 8776554 556565 778899999999999999964 3445889999999999999999 59999999999999999
Q ss_pred cCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhhHHHHHhcccccc
Q 003364 250 TRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPI 329 (826)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~ 329 (826)
+.+.++.|-..++..+|.+.++++.+.++++++....-.. ...|| - ..++|+++++.+||+
T Consensus 307 Nts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~------~~~wy----------i---~~~RfllLFS~IIPI 367 (1051)
T KOG0210|consen 307 NTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGF------GSDWY----------I---YIIRFLLLFSSIIPI 367 (1051)
T ss_pred ccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcC------CCchH----------H---HHHHHHHHHhhhcee
Confidence 9999999999999999999999999988888766543211 11243 2 236888899999999
Q ss_pred eehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCeeecCCCCC
Q 003364 330 SIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGD 409 (826)
Q Consensus 330 ~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~ 409 (826)
+|-+.+++++..+++.+..|.++. +..+|+..+.|+||++.++.+|||||||+|.|.++++.++-..|..+..+
T Consensus 368 SLRvnlDmaK~~ys~~i~~D~~Ip------gtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~ 441 (1051)
T KOG0210|consen 368 SLRVNLDMAKIVYSWQIEHDKNIP------GTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMD 441 (1051)
T ss_pred EEEEehhHHHhhHhhhcccCCCCC------ceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHH
Confidence 999999999999999776666553 47799999999999999999999999999999999999988777665322
Q ss_pred cccchhhhhhh---------------ccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEE
Q 003364 410 ALKDVGLLNAI---------------TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLV 474 (826)
Q Consensus 410 ~~~~~~~~~~~---------------~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~ 474 (826)
... ....... ...+..+.++..++++||+++|..+++|+..|.+.+|+|.|++++....|..+.
T Consensus 442 eV~-~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~ 520 (1051)
T KOG0210|consen 442 EVS-QHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLA 520 (1051)
T ss_pred HHH-HHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEe
Confidence 111 0000000 011234678999999999999999999999999999999999999999999999
Q ss_pred eecCceEEEEeC-CeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcCCChhHHHHHHHHHHHc
Q 003364 475 NKNASILEIKFN-GSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQL 553 (826)
Q Consensus 475 ~~~~~~~~~~~~-~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~ 553 (826)
.|+.+.+....+ +...+|+|++.+||+|+.|||.+||+++.++++..|.|||+-+|...... ..++++...+++++
T Consensus 521 ~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~---NdWleEE~gNMARE 597 (1051)
T KOG0210|consen 521 KRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY---NDWLEEECGNMARE 597 (1051)
T ss_pred ecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc---chhhhhhhhhhhhh
Confidence 999998888765 45679999999999999999999999998999999999999999888753 56899999999999
Q ss_pred CCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHH-HhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeE
Q 003364 554 GLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQ-RLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINF 632 (826)
Q Consensus 554 G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v 632 (826)
|+|++++|.|.++.+|++.+...|+.+..+..+|.+++.+..+ .+|+||+++|+.|.||+++++++.+++.||+|||++
T Consensus 598 GLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgiki 677 (1051)
T KOG0210|consen 598 GLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKI 677 (1051)
T ss_pred cceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEE
Confidence 9999999999999999999999999999999999999998777 899999999999999999999999999999999999
Q ss_pred EEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecC-CCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHHHHH
Q 003364 633 WMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDG-KTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRK 711 (826)
Q Consensus 633 ~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 711 (826)
||+|||..+||..+|+..++...++. +..+.. ..-.+....++.. ......+++++|++++..++.++.
T Consensus 678 WMLTGDKlETA~ciAkSs~L~sR~q~--ihv~~~v~sr~dah~eL~~l--------R~k~~~aLvi~G~Sl~~cl~yye~ 747 (1051)
T KOG0210|consen 678 WMLTGDKLETAICIAKSSRLFSRGQY--IHVIRSVTSRGDAHNELNNL--------RRKTDCALVIDGESLEFCLKYYED 747 (1051)
T ss_pred EEEcCcchhheeeeehhccceecCce--EEEEEecCCchHHHHHHHHh--------hcCCCcEEEEcCchHHHHHHHHHH
Confidence 99999999999999999999887654 322222 2222333222221 234578999999999999999999
Q ss_pred HHhhhccccceeEEEEeCcccHHHHHHHhhcC-CCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccchhc
Q 003364 712 AFTELAILSRTAICCRVTPSQKAQLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (826)
Q Consensus 712 ~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~~~ 790 (826)
+|.++.+-....++||++|.||+++++.+++. +..|+++|||-||+.|+++||+||.+.|++|.++.-+||+.+..|.+
T Consensus 748 Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~H 827 (1051)
T KOG0210|consen 748 EFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSH 827 (1051)
T ss_pred HHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHH
Confidence 99998888889999999999999999999984 78999999999999999999999999999999999999999999999
Q ss_pred chhheeecchhhHHHHHHHHHHHhhhhHHHHHhh
Q 003364 791 LKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQ 824 (826)
Q Consensus 791 l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~ 824 (826)
+.+++++|||.+|+|..++.+|.+.+++++..+|
T Consensus 828 v~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Q 861 (1051)
T KOG0210|consen 828 VSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQ 861 (1051)
T ss_pred HHHHhhccccchHHHHHHHHHHHHhhhHHHHHHH
Confidence 9999999999999999999999999999998876
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-98 Score=890.12 Aligned_cols=650 Identities=30% Similarity=0.421 Sum_probs=518.6
Q ss_pred ccccccCCCceEEeecc-cccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcc-cchhhhhhhhhhhhhHHHHHH
Q 003364 11 ETSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPA-STWGPLIFIFAVSATKEAWDD 88 (826)
Q Consensus 11 ~~r~~~~g~N~i~~~~~-~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~-~~~~~l~~i~~~~~~~~~~~~ 88 (826)
.+|++.||.|+++..+. ++| ..++.+|.+++++.++++++++++.... .+. ..+..++.+++++.+..++++
T Consensus 51 ~~r~~~~G~N~~~~~~~~~~~----~~fl~~f~~~~~~iL~~~a~~s~~~~~~--~~~~~~~~~I~~~i~~n~~~g~~qe 124 (917)
T COG0474 51 KRRLKKYGPNELPEEKKRSLL----KKFLRQFKDPFIILLLVAALLSAFVGDW--VDAGVDAIVILLVVVINALLGFVQE 124 (917)
T ss_pred HHHHhhcCCccccccccCcHH----HHHHHHHHHHHHHHHHHHHHHHHHhhcc--cccCcceeeehHHHHHHHHHHHHHH
Confidence 45889999999997765 556 8899999999998888888888765421 111 233445556667777788899
Q ss_pred HHhhh---hhHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceee
Q 003364 89 YNRYL---SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR 165 (826)
Q Consensus 89 ~~~~~---~~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K 165 (826)
+++.+ +++++.+.+++|+|||++++|++++|||||||.|++||+||||++|+++++ +.||||+|||||.|+.|
T Consensus 125 ~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~----l~VdEs~LTGES~pv~K 200 (917)
T COG0474 125 YRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVEK 200 (917)
T ss_pred HHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC----ceEEcccccCCCcchhc
Confidence 88855 567778899999999999999999999999999999999999999998775 69999999999999999
Q ss_pred eccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcc
Q 003364 166 LIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNET 245 (826)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T 245 (826)
.+...... +.| ..++..|++|+||.+.+| .+.|+|++||++|
T Consensus 201 ~~~~~~~~---------------~~~----------------------~~~d~~n~l~sGt~V~~G-~~~giVvaTG~~T 242 (917)
T COG0474 201 QALPLTKS---------------DAP----------------------LGLDRDNMLFSGTTVVSG-RAKGIVVATGFET 242 (917)
T ss_pred cccccccc---------------ccc----------------------ccCCccceEEeCCEEEcc-eEEEEEEEEcCcc
Confidence 75432110 000 002578999999999999 6999999999999
Q ss_pred eeeccCCC---CCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhhHHHHH
Q 003364 246 KLGMTRGI---PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELL 322 (826)
Q Consensus 246 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (826)
..|++... .....+++++.++++...++.++++++++.++..... ....|...+. ..+.+
T Consensus 243 ~~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~--------------~~~~~~~~~~---~~v~l 305 (917)
T COG0474 243 EFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFR--------------GGNGLLESFL---TALAL 305 (917)
T ss_pred HHHHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------------cCccHHHHHH---HHHHH
Confidence 99998664 2257899999999999999999888888777665211 1112444443 34457
Q ss_pred hcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCee
Q 003364 323 CSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIF 402 (826)
Q Consensus 323 ~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~ 402 (826)
++.++|++||++++++..+++. +|.+++ +++|+++++|+||++++||+|||||||+|+|+|.++++.+.
T Consensus 306 ~va~IPegLp~~vti~la~g~~------~mak~~----~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~- 374 (917)
T COG0474 306 AVAAVPEGLPAVVTIALALGAQ------RMAKDN----AIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGG- 374 (917)
T ss_pred HHhccccchHHHHHHHHHHHHH------HHHhcc----chhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCC-
Confidence 8899999999999999999888 555554 78999999999999999999999999999999999998851
Q ss_pred ecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEeecCceEE
Q 003364 403 YGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILE 482 (826)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~ 482 (826)
..+.+ + .....++...+++.++++||+..+..+ + ++..+||+|.|+++++.+.|+.. . .
T Consensus 375 --~~~~~---~-----~~~~~~~~~~~~l~~~~lc~~~~~~~~-~---~~~~gdptE~Al~~~a~~~~~~~-~--~---- 433 (917)
T COG0474 375 --GKDID---D-----KDLKDSPALLRFLLAAALCNSVTPEKN-G---WYQAGDPTEGALVEFAEKLGFSL-D--L---- 433 (917)
T ss_pred --ccccc---c-----cccccchHHHHHHHHHHhcCccccccc-C---ceecCCccHHHHHHHHHhcCCcC-C--H----
Confidence 00000 0 011123345578899999999887655 3 67789999999999999988643 1 0
Q ss_pred EEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhc--------CCChhHHHHHHHHHHHcC
Q 003364 483 IKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA--------GQQTRTFVEAVEQYSQLG 554 (826)
Q Consensus 483 ~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~--------~~~~~~~~~~~~~~~~~G 554 (826)
......+++++.+||+|+||||+|+++.. ++++++++|||||.|+++|+. +..++.+.+..++|+.+|
T Consensus 434 ---~~~~~~~~~~~~~PFdS~rKrMsviv~~~-~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~g 509 (917)
T COG0474 434 ---SGLEVEYPILAEIPFDSERKRMSVIVKTD-EGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEG 509 (917)
T ss_pred ---HHHhhhcceeEEecCCCCceEEEEEEEcC-CCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHH
Confidence 22234568899999999999999999954 455999999999999999974 234577899999999999
Q ss_pred CeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEE
Q 003364 555 LRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWM 634 (826)
Q Consensus 555 ~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i 634 (826)
+||+++|||.++..+... .. +..|+||+|+|+++|+||+|+++++||+.|+++||++||
T Consensus 510 lRvla~A~k~~~~~~~~~--------------------~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~M 568 (917)
T COG0474 510 LRVLAVAYKKLDRAEKDD--------------------EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWM 568 (917)
T ss_pred HHHHHHHhccCCcccccc--------------------hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEE
Confidence 999999999776543211 01 467899999999999999999999999999999999999
Q ss_pred EcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHHH-HHHH
Q 003364 635 LTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHY-RKAF 713 (826)
Q Consensus 635 ~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-~~~~ 713 (826)
+|||+..||.++|++||+...... .++++|..+..+.++. .+.
T Consensus 569 iTGD~~~TA~aIa~~~Gi~~~~~~-----------------------------------~~vi~G~el~~l~~~el~~~- 612 (917)
T COG0474 569 ITGDHVETAIAIAKECGIEAEAES-----------------------------------ALVIDGAELDALSDEELAEL- 612 (917)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCCc-----------------------------------eeEeehHHhhhcCHHHHHHH-
Confidence 999999999999999998543211 4567777776665541 222
Q ss_pred hhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHh-hccccccc--hhc
Q 003364 714 TELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-AADYSIGK--FRF 790 (826)
Q Consensus 714 ~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~-~Ad~v~~~--~~~ 790 (826)
.....+|||++|+||.++|+.+|+.|+.|+|+|||.||+||||.||||||| |..++++.+ +||+++.+ +..
T Consensus 613 -----~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIam-g~~Gtdaak~Aadivl~dd~~~~ 686 (917)
T COG0474 613 -----VEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAM-GGEGTDAAKEAADIVLLDDNFAT 686 (917)
T ss_pred -----hhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEe-cccHHHHHHhhcceEeecCcHHH
Confidence 122449999999999999999999999999999999999999999999999 655666665 88998833 333
Q ss_pred chhheeecchhhHHHHHHHHHHHhhhhHHHHHhhh
Q 003364 791 LKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825 (826)
Q Consensus 791 l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (826)
+.. .+.|||++|.|+++++.|.+++|+...++++
T Consensus 687 i~~-av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~ 720 (917)
T COG0474 687 IVL-AVVEGRRVYVNIKKFILYLLSKNVGEVLTLL 720 (917)
T ss_pred HHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333 6889999999999999999999998666654
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-98 Score=808.78 Aligned_cols=684 Identities=23% Similarity=0.281 Sum_probs=512.2
Q ss_pred ccccccCCCceEEeecc-cccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHHHH
Q 003364 11 ETSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDY 89 (826)
Q Consensus 11 ~~r~~~~g~N~i~~~~~-~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 89 (826)
..|++.||.|+++.... +.| +.+++||.+++..++|+.+++++.... +...+.+.+++++.++..+||+|
T Consensus 30 ~~r~~~yG~Nel~~ee~~~~w----k~vLeQF~n~Li~iLL~sA~ISfvl~~-----~~e~~vI~liiv~nvtVG~~QEy 100 (972)
T KOG0202|consen 30 TRRRKKYGENELPAEEGESLW----KLVLEQFDNPLILILLLSAAISFVLAD-----FDEPFVITLIIVINVTVGFVQEY 100 (972)
T ss_pred HHHHHhcCCccCccccCCcHH----HHHHHHHHhHHHHHHHHHHHHHHHHHh-----cccceeeeeeeeeeeeeeeeeeh
Confidence 45999999999998654 566 999999999999999999999987542 22334455566677888999999
Q ss_pred Hhhhh---hHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeee
Q 003364 90 NRYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL 166 (826)
Q Consensus 90 ~~~~~---~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~ 166 (826)
++.|+ ++++.|+.|+|+|+|+.+.+++++|||||||.|+-||+||||.+|++..+ +.||||+|||||.|+.|.
T Consensus 101 ~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s----l~iDeS~LTGEs~pv~K~ 176 (972)
T KOG0202|consen 101 NAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS----LRIDESSLTGESEPVSKD 176 (972)
T ss_pred hhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEeeee----eeeecccccCCccccccc
Confidence 98776 56667899999999999999999999999999999999999999999887 899999999999999995
Q ss_pred ccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcce
Q 003364 167 IPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETK 246 (826)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T~ 246 (826)
.... | .+++...-+++|++|+||.+..| .+.|+|+.||.+|.
T Consensus 177 t~~v--------------------~-----------------~~~~~~~~dk~NiaFsGT~V~~G-~a~GIVi~TG~nTe 218 (972)
T KOG0202|consen 177 TDAV--------------------P-----------------KDENADVQDKKNIAFSGTLVVAG-RAKGIVIGTGLNTE 218 (972)
T ss_pred Cccc--------------------c-----------------CCCCCccccceeeEeecceeecC-ceeEEEEeccccch
Confidence 3211 0 01222223688999999999999 89999999999999
Q ss_pred eeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHh--hcchhccccccccceeeCCCCCccchhhhhhhHHHH
Q 003364 247 LGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGT--AGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFEL 321 (826)
Q Consensus 247 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (826)
+|++.. ..+..++|+|+.++.+...+.-+..++++.+++ ++++... .+...|+ ..+..++.++++
T Consensus 219 iG~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p-~~~g~~f------k~~~~~f~IaVs--- 288 (972)
T KOG0202|consen 219 IGKIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDP-VHGGSWF------KGALYYFKIAVS--- 288 (972)
T ss_pred HHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccc-cccccch------hchhhhhhHHHH---
Confidence 998654 345668999999999988877333322222222 2211100 0001121 123444554443
Q ss_pred HhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCe
Q 003364 322 LCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGI 401 (826)
Q Consensus 322 l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~ 401 (826)
+..++||.+||+.++....++.+ +|.+++ +.+|.+..+|+||.+++||+|||||||+|+|.+.++|+.+.
T Consensus 289 LAVAAIPEGLPaVvT~tLALG~~------rMakkn----aIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~ 358 (972)
T KOG0202|consen 289 LAVAAIPEGLPAVVTTTLALGTR------RMAKKN----AIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDG 358 (972)
T ss_pred HHHHhccCCCcchhhhhHHHhHH------HHHhhh----hhhhcccchhhccceeEEecCCCCcccccceEEEEEEeccc
Confidence 56789999999777666666665 777776 78999999999999999999999999999999999999876
Q ss_pred eecCCC-----CCcc-------cchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhC
Q 003364 402 FYGNET-----GDAL-------KDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQL 469 (826)
Q Consensus 402 ~~~~~~-----~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~ 469 (826)
.+...+ +... .+...........+.+.+++++.++||.+....++. ......|.|+|.||..++.+.
T Consensus 359 ~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~~~~~~G~pTE~AL~vlaeKm 437 (972)
T KOG0202|consen 359 GTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDA-DCYEKVGEPTEGALIVLAEKM 437 (972)
T ss_pred ccccccccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCch-hhHHhcCCchHHHHHHHHHHc
Confidence 554431 0000 000000001123456889999999999887665543 233336899999999999999
Q ss_pred CeEEEeecCc-eEEE-EeCC-eEEEEEEEEeeccCCCCCceEEEEEecCC-CeEEEEecCchhhhhhhhhc---------
Q 003364 470 HMVLVNKNAS-ILEI-KFNG-SVLQYEILETLEFTSDRKRMSVVVKDCHS-GNISLLSKGADEAILPYAHA--------- 536 (826)
Q Consensus 470 ~~~~~~~~~~-~~~~-~~~~-~~~~~~i~~~~~f~~~~k~~sviv~~~~~-~~~~~~~KGa~e~i~~~~~~--------- 536 (826)
|+.-...... ...- .++. ....++..+.+||+++||+|+|.+.+.++ ..+.+|+|||+|.++++|+.
T Consensus 438 ~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~ 517 (972)
T KOG0202|consen 438 GLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTK 517 (972)
T ss_pred CCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCcee
Confidence 8754331110 0000 0000 12345677999999999999999998755 35899999999999999952
Q ss_pred ----CCChhHHHHHHHHHHHcCCeEEEEEEEecCH-H-HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEee
Q 003364 537 ----GQQTRTFVEAVEQYSQLGLRTLCLAWREVEE-D-EYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAI 610 (826)
Q Consensus 537 ----~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~ 610 (826)
+..++.+.+...+|+.+|+||+++|+++.+. . +... .....-+...|+||+|+|++|+
T Consensus 518 ~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~----------------l~~~s~~~~~E~~LtFvGlVGi 581 (972)
T KOG0202|consen 518 VPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQD----------------LNDTSNRATAESDLTFVGLVGI 581 (972)
T ss_pred eeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhh----------------hcccccccccccceEEEEEeec
Confidence 1235678899999999999999999998764 1 1000 0001123578899999999999
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCC
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (826)
.||+|++++++|+.|+++||+|.|+|||+..||.++|+++|+...+..-.-..+.|.++++
T Consensus 582 ~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~------------------- 642 (972)
T KOG0202|consen 582 LDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDD------------------- 642 (972)
T ss_pred cCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhc-------------------
Confidence 9999999999999999999999999999999999999999987765432222333433333
Q ss_pred CceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEec
Q 003364 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (826)
Q Consensus 691 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~ 770 (826)
+..+... .......+|+|++|.+|.++|+.|++.++.|+|.|||.||+|+||.||+||||
T Consensus 643 --------------ls~~~~~-----~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAM- 702 (972)
T KOG0202|consen 643 --------------LSDEELD-----DAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAM- 702 (972)
T ss_pred --------------CCHHHHH-----HHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceee-
Confidence 2222111 11344789999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHh-hccccccc--hhcchhheeecchhhHHHHHHHHHHHhhhhHHHHH
Q 003364 771 GREGLQAAR-AADYSIGK--FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICF 822 (826)
Q Consensus 771 gn~~~~~~~-~Ad~v~~~--~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~ 822 (826)
|..++++++ +||+|+.+ |..+.. .+-|||.+|+|+++++.|.+..|+.-..
T Consensus 703 G~~GTdVaKeAsDMVL~DDnFstIva-AVEEGr~IynNik~Fir~~lSsnVgev~ 756 (972)
T KOG0202|consen 703 GISGTDVAKEASDMVLADDNFSTIVA-AVEEGRAIYNNIKNFIRYLLSSNVGEVV 756 (972)
T ss_pred cCCccHhhHhhhhcEEecCcHHHHHH-HHHHhHHHHHHHHHHHHHHHhhhHHHHH
Confidence 855555555 99999954 444443 2447999999999999999999985433
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-95 Score=870.12 Aligned_cols=690 Identities=21% Similarity=0.246 Sum_probs=514.1
Q ss_pred CCccccccCCCceEEeecc-cccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHH
Q 003364 9 DDETSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWD 87 (826)
Q Consensus 9 ~~~~r~~~~g~N~i~~~~~-~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~ 87 (826)
+.++|+++||+|+++.++. ++| ..|++||.+|++++++++++++++.. .+...+.+++++++++++.+++
T Consensus 31 ea~~rl~~~G~N~l~~~~~~s~~----~~~l~q~~~~~~~iL~~aails~~~~-----~~~~~~iIl~vv~in~~i~~~Q 101 (1053)
T TIGR01523 31 EAQHRLKEVGENRLEADSGIDAK----AMLLHQVCNAMCMVLIIAAAISFAMH-----DWIEGGVISAIIALNILIGFIQ 101 (1053)
T ss_pred HHHHHHHHcCCCCCCCCCCCCHH----HHHHHHHhCHHHHHHHHHHHHHHHHh-----hHHHHHHHHhHHHHHHHHHHHH
Confidence 3467999999999999875 566 89999999999988888888888643 2223345566677788899999
Q ss_pred HHHhhhh---hHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCcee
Q 003364 88 DYNRYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKT 164 (826)
Q Consensus 88 ~~~~~~~---~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~ 164 (826)
++++.++ ++++.+++++|+|||++++|++++|||||||.|++||+|||||+|+++++ +.||||+|||||.|+.
T Consensus 102 E~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~----L~VDES~LTGES~pV~ 177 (1053)
T TIGR01523 102 EYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN----FDTDEALLTGESLPVI 177 (1053)
T ss_pred HHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc----eEEEchhhcCCCCcee
Confidence 9998775 55667789999999999999999999999999999999999999998766 9999999999999999
Q ss_pred eeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCc
Q 003364 165 RLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNE 244 (826)
Q Consensus 165 K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~ 244 (826)
|.+..... .+.+....+..|++|+||.|.+| .+.|+|++||.+
T Consensus 178 K~~~~~~~------------------------------------~~~~~~~~d~~n~lf~GT~V~~G-~g~~vVvatG~~ 220 (1053)
T TIGR01523 178 KDAHATFG------------------------------------KEEDTPIGDRINLAFSSSAVTKG-RAKGICIATALN 220 (1053)
T ss_pred cccccccc------------------------------------ccccCCcccCCCccccCceEEee-eEEEEEEEecCc
Confidence 96421100 00001112567999999999999 799999999999
Q ss_pred ceeeccCCCC---C-----------------------------------CccchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 003364 245 TKLGMTRGIP---E-----------------------------------PKLTAVDAMIDKLTGAIFVFQIVVVIVLGTA 286 (826)
Q Consensus 245 T~~~~~~~~~---~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 286 (826)
|.+|++.+.. . ..++|+++.+++++.+++.++++++++++++
T Consensus 221 T~~GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~ 300 (1053)
T TIGR01523 221 SEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAA 300 (1053)
T ss_pred cHHHHHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999864421 0 0148999999999998888777776665543
Q ss_pred cchhccccccccceeeCCCCCccchhhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCccccccc
Q 003364 287 GNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNT 366 (826)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 366 (826)
... . .+...+.++ +.++..++|++||+.++++..++++ +|.+++ +++|++
T Consensus 301 ~~~---------------~--~~~~~~~~a---v~l~Va~VPegLp~~vti~La~g~~------rMak~~----~lVr~L 350 (1053)
T TIGR01523 301 HKF---------------D--VDKEVAIYA---ICLAISIIPESLIAVLSITMAMGAA------NMSKRN----VIVRKL 350 (1053)
T ss_pred Hhh---------------h--hhHHHHHHH---HHHHHHHcccchHHHHHHHHHHHHH------HHHhcC----CEeccc
Confidence 210 0 011222222 2356788999999988888888877 666665 899999
Q ss_pred ccccccccceEEEecCCcccccceeeEEEEEEcC-eeecCCC---------CCc----------cc-----chhhhhh--
Q 003364 367 AISEDLAQVEYILTDKTGTLTENRMIFRRCCIGG-IFYGNET---------GDA----------LK-----DVGLLNA-- 419 (826)
Q Consensus 367 ~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~-~~~~~~~---------~~~----------~~-----~~~~~~~-- 419 (826)
.++|+||++++||+|||||||+|+|+|.++|+++ ..|..+. ++. .. .......
T Consensus 351 ~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (1053)
T TIGR01523 351 DALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFK 430 (1053)
T ss_pred hhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999864 1221100 000 00 0000000
Q ss_pred --hc-----c--CCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEE---eec------C-ce
Q 003364 420 --IT-----S--GSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLV---NKN------A-SI 480 (826)
Q Consensus 420 --~~-----~--~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~---~~~------~-~~ 480 (826)
.. . .++...+++.+.++||++....++........|||+|.||++++.+.|+... ... . ..
T Consensus 431 ~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~ 510 (1053)
T TIGR01523 431 DELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQ 510 (1053)
T ss_pred ccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccc
Confidence 00 0 1123567888999999876543211111123589999999999998886321 000 0 00
Q ss_pred EEEE---eCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcC-------------CChhHHH
Q 003364 481 LEIK---FNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG-------------QQTRTFV 544 (826)
Q Consensus 481 ~~~~---~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~-------------~~~~~~~ 544 (826)
...+ ..+....|+++..+||+|+||||+++++..+++.+++|+|||||.|+++|+.. ..++.+.
T Consensus 511 ~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~ 590 (1053)
T TIGR01523 511 SSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELII 590 (1053)
T ss_pred cccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHH
Confidence 0000 01123468899999999999999999987544568999999999999999631 1135677
Q ss_pred HHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHH
Q 003364 545 EAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIET 624 (826)
Q Consensus 545 ~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~ 624 (826)
+.+++|+++|+||+++|||.++.++...+ .+... .. .++.+|+||+|+|+++++||+|++++++|++
T Consensus 591 ~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~~~---~~--------~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~ 657 (1053)
T TIGR01523 591 ANMESLAAEGLRVLAFASKSFDKADNNDD--QLKNE---TL--------NRATAESDLEFLGLIGIYDPPRNESAGAVEK 657 (1053)
T ss_pred HHHHHHHhcCCeEEEEEEEECCchhccch--hhhcc---cc--------chhhhccCCEEEEEEeeecCCchhHHHHHHH
Confidence 88999999999999999999986543211 00000 00 1135789999999999999999999999999
Q ss_pred HHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHH
Q 003364 625 LRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEI 704 (826)
Q Consensus 625 l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 704 (826)
|+++||++||+|||+..+|.++|+++||...+.. ... . ......+++|..++.
T Consensus 658 l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~----~~~-~----------------------~~~~~~vitG~~l~~ 710 (1053)
T TIGR01523 658 CHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFI----HDR-D----------------------EIMDSMVMTGSQFDA 710 (1053)
T ss_pred HHHCCCEEEEECCCCHHHHHHHHHHcCCCCcccc----ccc-c----------------------ccccceeeehHHhhh
Confidence 9999999999999999999999999999754210 000 0 001125677877766
Q ss_pred HHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecC-CchHHHHhhccc
Q 003364 705 ALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG-REGLQAARAADY 783 (826)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g-n~~~~~~~~Ad~ 783 (826)
+.+...+.. .....+|+|++|+||.++|+.+++.++.|+|+|||.||+|||+.||||||| | ++.+-++++||+
T Consensus 711 l~~~~l~~~-----~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAm-g~~gt~vak~aADi 784 (1053)
T TIGR01523 711 LSDEEVDDL-----KALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM-GINGSDVAKDASDI 784 (1053)
T ss_pred cCHHHHHHH-----hhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEec-CCCccHHHHHhcCE
Confidence 544322222 233579999999999999999999999999999999999999999999999 7 444445669999
Q ss_pred ccc--chhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHhhh
Q 003364 784 SIG--KFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825 (826)
Q Consensus 784 v~~--~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (826)
++. +|..+.+. +.+||++|+|+++++.|.+++|+...++.+
T Consensus 785 vl~dd~f~~I~~~-i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~ 827 (1053)
T TIGR01523 785 VLSDDNFASILNA-IEEGRRMFDNIMKFVLHLLAENVAEAILLI 827 (1053)
T ss_pred EEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 994 57888884 689999999999999999999997766554
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-93 Score=860.51 Aligned_cols=694 Identities=21% Similarity=0.261 Sum_probs=509.3
Q ss_pred ccccccCCCceEEeecccccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHHHHH
Q 003364 11 ETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYN 90 (826)
Q Consensus 11 ~~r~~~~g~N~i~~~~~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~ 90 (826)
++|+++||+|+++.+++++| +++++++.+|++++++++++++++. +++.+.+.++++++++.+...+++++
T Consensus 146 ~~r~~~yG~N~i~~~~~s~~----~ll~~~~~~p~~i~~i~~~~l~~~~-----~~~~~~~~i~~i~~~~~~~~~~~~~k 216 (1054)
T TIGR01657 146 AQRKAKYGKNEIEIPVPSFL----ELLKEEVLHPFYVFQVFSVILWLLD-----EYYYYSLCIVFMSSTSISLSVYQIRK 216 (1054)
T ss_pred HHHHHhcCCCeeecCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999999999888777 8999999999987777766665532 22223334444555667778888888
Q ss_pred hhhhhHhhc--ceEEEEEeCCeEEEEEeecCccccEEEee--CCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeee
Q 003364 91 RYLSDKKAN--EKEVWVVKQGIKKLIQSQDIRVGNIVWLR--ENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL 166 (826)
Q Consensus 91 ~~~~~~~~~--~~~~~V~r~g~~~~i~~~~l~~GDII~l~--~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~ 166 (826)
..++++++. +..++|+|||+|++|++++|||||||.|+ +|++|||||+|+ +|.|.||||+|||||.|+.|.
T Consensus 217 ~~~~L~~~~~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll-----~g~~~VdES~LTGES~Pv~K~ 291 (1054)
T TIGR01657 217 QMQRLRDMVHKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLL-----SGSCIVNESMLTGESVPVLKF 291 (1054)
T ss_pred HHHHHHHhhcCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEE-----eCcEEEecccccCCccceecc
Confidence 777766654 67899999999999999999999999999 999999999999 778999999999999999997
Q ss_pred ccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeec------CceEEEEEEE
Q 003364 167 IPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRN------TEWACGVAVY 240 (826)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~------g~~~~~~V~~ 240 (826)
+.+..... +.+ ........+|++|+||.+.+ .+.+.|+|++
T Consensus 292 ~~~~~~~~-----------------~~~----------------~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~ 338 (1054)
T TIGR01657 292 PIPDNGDD-----------------DED----------------LFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVR 338 (1054)
T ss_pred cCCccccc-----------------ccc----------------ccccccccceEEEcCCEEEEEecCCCCCcEEEEEEe
Confidence 54210000 000 00011256789999999985 1379999999
Q ss_pred eCCcceeeccCCC---CCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhh
Q 003364 241 TGNETKLGMTRGI---PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPL 317 (826)
Q Consensus 241 tG~~T~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (826)
||.+|..|++.+. .+++.+++++.+.++..+++.++++.+++.++.+ .. .+.++...+ +
T Consensus 339 TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~-~~--------------~~~~~~~~~---l 400 (1054)
T TIGR01657 339 TGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIEL-IK--------------DGRPLGKII---L 400 (1054)
T ss_pred CCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-HH--------------cCCcHHHHH---H
Confidence 9999999987653 4556788888888887766555544333222211 00 111233333 4
Q ss_pred HHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEE
Q 003364 318 RFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCC 397 (826)
Q Consensus 318 ~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~ 397 (826)
.++.+++.++|++||++++++...+.. +|.+++ ++++++.++|.||++|++|||||||||+|+|.|.+++
T Consensus 401 ~~l~iiv~~vP~~LP~~~ti~l~~~~~------rL~k~~----il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~ 470 (1054)
T TIGR01657 401 RSLDIITIVVPPALPAELSIGINNSLA------RLKKKG----IFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQ 470 (1054)
T ss_pred HHHHHHHhhcCchHHHHHHHHHHHHHH------HHHHCC----EEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEe
Confidence 556678899999999999888877766 555544 8999999999999999999999999999999999998
Q ss_pred EcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEeec
Q 003364 398 IGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKN 477 (826)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~ 477 (826)
..+...... .... ...+.....+..++++||++.... + ...|||+|.|+++++.+ ......
T Consensus 471 ~~~~~~~~~--~~~~--------~~~~~~~~~~~~~~a~C~~~~~~~---~---~~~Gdp~E~al~~~~~~---~~~~~~ 531 (1054)
T TIGR01657 471 GLSGNQEFL--KIVT--------EDSSLKPSITHKALATCHSLTKLE---G---KLVGDPLDKKMFEATGW---TLEEDD 531 (1054)
T ss_pred cccCccccc--cccc--------cccccCchHHHHHHHhCCeeEEEC---C---EEecCHHHHHHHHhCCC---EEECCC
Confidence 643211000 0000 001122345677899999987542 2 23699999999998743 222100
Q ss_pred CceE------EEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcCCChhHHHHHHHHHH
Q 003364 478 ASIL------EIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYS 551 (826)
Q Consensus 478 ~~~~------~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~ 551 (826)
.... .+...+....+++++++||+|++|||||+++..+++++++|+|||||.|+++|++...++++.+.+++|+
T Consensus 532 ~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~~p~~~~~~~~~~a 611 (1054)
T TIGR01657 532 ESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYT 611 (1054)
T ss_pred CcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcCCChhHHHHHHHHH
Confidence 0000 0001122357999999999999999999999876678899999999999999997778899999999999
Q ss_pred HcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCe
Q 003364 552 QLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGIN 631 (826)
Q Consensus 552 ~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~ 631 (826)
.+|+||+++|||.+++.+..++.+ ..++.+|+||+|+|+++|+|++||+++++|++|+++||+
T Consensus 612 ~~G~RVLalA~k~l~~~~~~~~~~-----------------~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~ 674 (1054)
T TIGR01657 612 REGYRVLALAYKELPKLTLQKAQD-----------------LSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIR 674 (1054)
T ss_pred hcCCEEEEEEEeecCccchhhhhh-----------------ccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCe
Confidence 999999999999997433221110 112567899999999999999999999999999999999
Q ss_pred EEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCC--C-----------HHHHHH-HHHHHHHH----cccccCCCCce
Q 003364 632 FWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK--T-----------EDEVCR-SLERVLLT----MRITTSEPKDV 693 (826)
Q Consensus 632 v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~--~-----------~~~~~~-~~~~~~~~----~~~~~~~~~~~ 693 (826)
++|+|||+..||.++|+++||..++.. ++..+-. . .++... ........ ..........+
T Consensus 675 v~miTGD~~~TA~~iA~~~gii~~~~~--vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (1054)
T TIGR01657 675 TVMITGDNPLTAVHVARECGIVNPSNT--LILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRY 752 (1054)
T ss_pred EEEECCCCHHHHHHHHHHcCCCCCCce--EEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccce
Confidence 999999999999999999999876432 2211100 0 000000 00000000 00001112345
Q ss_pred EEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCc
Q 003364 694 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGRE 773 (826)
Q Consensus 694 ~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~ 773 (826)
.++++|+.++.+.+...+.+..+ ..+..+|+|++|+||.++|+.+|..|+.|+|+|||.||++|||+||||||| +++
T Consensus 753 ~~~itG~~l~~l~~~~~~~l~~~--~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam-~~~ 829 (1054)
T TIGR01657 753 HLAMSGKAFAVLQAHSPELLLRL--LSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISL-SEA 829 (1054)
T ss_pred EEEEEcHHHHHHHHhhHHHHHHH--HhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceee-ccc
Confidence 78999999988765544444443 345679999999999999999999999999999999999999999999999 554
Q ss_pred hHHHHhhccccc--cchhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHh
Q 003364 774 GLQAARAADYSI--GKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFI 823 (826)
Q Consensus 774 ~~~~~~~Ad~v~--~~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~ 823 (826)
+++.+||++. +++..+.. ++.+||+++.++.++++|.+.++++..+.
T Consensus 830 --das~AA~f~l~~~~~~~I~~-~I~eGR~~l~~~~~~~~~~~~~~~~~~~~ 878 (1054)
T TIGR01657 830 --EASVAAPFTSKLASISCVPN-VIREGRCALVTSFQMFKYMALYSLIQFYS 878 (1054)
T ss_pred --cceeecccccCCCcHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567899997 56677777 45699999999999999988888765443
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-93 Score=858.98 Aligned_cols=691 Identities=21% Similarity=0.246 Sum_probs=516.7
Q ss_pred CCCccccccCCCceEEeeccc-ccccccHHHHHHhhhHHHHHHHHHHHHhhccCccc--------cCcccchhhhhhhhh
Q 003364 8 NDDETSQDLYCANRLSNRKYT-LMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITP--------VNPASTWGPLIFIFA 78 (826)
Q Consensus 8 ~~~~~r~~~~g~N~i~~~~~~-~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~--------~~~~~~~~~l~~i~~ 78 (826)
.+.++|+++||+|+++.++.+ +| +.|+++|.+|+++.++++++++++..... .+.+...++++++++
T Consensus 40 ~e~~~rl~~~G~N~l~~~~~~~~~----~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~ 115 (997)
T TIGR01106 40 ARAAEILARDGPNALTPPPTTPEW----VKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVI 115 (997)
T ss_pred HHHHHHHHHhCCCCCCCCCCCCHH----HHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHH
Confidence 345679999999999887654 55 88999999999999988888866532110 012223345666777
Q ss_pred hhhhHHHHHHHHhhhhhHhh---cceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCC
Q 003364 79 VSATKEAWDDYNRYLSDKKA---NEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAA 155 (826)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~---~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~ 155 (826)
+++++.+++++++.++++++ .+.+++|+|||++++|++++|||||+|.|++||+|||||+|+++++ +.||||+
T Consensus 116 i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~VdeS~ 191 (997)
T TIGR01106 116 ITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDNSS 191 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEEccc
Confidence 78889999999988776544 4679999999999999999999999999999999999999996543 8999999
Q ss_pred CCCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEE
Q 003364 156 LDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWAC 235 (826)
Q Consensus 156 lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~ 235 (826)
|||||.|+.|.+.. ....++..+|.+|+||.+.+| .+.
T Consensus 192 LTGES~pv~K~~~~-----------------------------------------~~~~~~~~~n~l~~Gt~v~~G-~~~ 229 (997)
T TIGR01106 192 LTGESEPQTRSPEF-----------------------------------------THENPLETRNIAFFSTNCVEG-TAR 229 (997)
T ss_pred cCCCCCceeccCCC-----------------------------------------cccCccccCCeEEeccEeeee-eEE
Confidence 99999999996431 011234678999999999999 799
Q ss_pred EEEEEeCCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchh
Q 003364 236 GVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYEL 312 (826)
Q Consensus 236 ~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (826)
++|++||.+|.+|++.+ ..+.+++++++.+++++..+..+++++++++++++... ...|...
T Consensus 230 ~~V~~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~ 294 (997)
T TIGR01106 230 GIVVNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLIL---------------GYTWLEA 294 (997)
T ss_pred EEEEEccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------cCCHHHH
Confidence 99999999999999766 34556799999999999888877776666555443221 1123333
Q ss_pred hhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceee
Q 003364 313 LVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMI 392 (826)
Q Consensus 313 ~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~ 392 (826)
+..++ .++..++|++||+++.++...++. +|.++ ++++|+++++|+||++++||||||||||+|+|+
T Consensus 295 ~~~~i---~v~v~~iP~~L~~~v~i~l~~~~~------~m~~~----~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~ 361 (997)
T TIGR01106 295 VIFLI---GIIVANVPEGLLATVTVCLTLTAK------RMARK----NCLVKNLEAVETLGSTSTICSDKTGTLTQNRMT 361 (997)
T ss_pred HHHHH---HHHhhcCCccchHHHHHHHHHHHH------HHHHC----CcEecCcHHHHHhcCCCEEEECCCCceecCceE
Confidence 33222 245567999999988888887776 44444 389999999999999999999999999999999
Q ss_pred EEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCc---eeeecCCccHHHHHHHHHhC
Q 003364 393 FRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGA---ILYKAQSQDEEALVHAAAQL 469 (826)
Q Consensus 393 v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~---~~~~~~~~~e~all~~a~~~ 469 (826)
|.++++++..|..+........ ......+....++.++++||++....+.++. -.+..|||+|.|+++++.+.
T Consensus 362 v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~ 437 (997)
T TIGR01106 362 VAHMWFDNQIHEADTTEDQSGV----SFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELC 437 (997)
T ss_pred EEEEEECCeEEecCCccCCCCc----cCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHh
Confidence 9999998876654321110000 0011123345688899999987654322110 12346899999999999864
Q ss_pred CeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEec--CCCeEEEEecCchhhhhhhhhc----C------
Q 003364 470 HMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDC--HSGNISLLSKGADEAILPYAHA----G------ 537 (826)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~--~~~~~~~~~KGa~e~i~~~~~~----~------ 537 (826)
+... .+.+..++.+..+||+|+||||+++++.. +++++++|+|||||.|+++|+. +
T Consensus 438 ~~~~------------~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~ 505 (997)
T TIGR01106 438 LGSV------------MEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLD 505 (997)
T ss_pred CCCH------------HHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCC
Confidence 3211 11234577889999999999999988642 2357899999999999999962 1
Q ss_pred -CChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHH-HHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccC
Q 003364 538 -QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQE-WSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQ 615 (826)
Q Consensus 538 -~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~ 615 (826)
+.++.+.+.+.+++++|+||+++|||.++.+++++ |. + +.+ ..+..|+||+|+|+++++||+|
T Consensus 506 ~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~--~--------~~~-----~~~~~e~~L~flGli~i~Dplr 570 (997)
T TIGR01106 506 EELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQ--F--------DTD-----DVNFPTDNLCFVGLISMIDPPR 570 (997)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEEEeecCccccccccc--c--------cch-----hhhccccCcEEEEEEeccCCCh
Confidence 12355788889999999999999999997654322 10 0 000 0123478999999999999999
Q ss_pred CchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEE
Q 003364 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAF 695 (826)
Q Consensus 616 ~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 695 (826)
++++++|++|+++|++++|+|||++.+|.++|+++|+..++... .+++........+. ........+
T Consensus 571 ~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~---------~~~i~~~~~~~~~~----~~~~~~~~~ 637 (997)
T TIGR01106 571 AAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNET---------VEDIAARLNIPVSQ----VNPRDAKAC 637 (997)
T ss_pred HHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccc---------hhhhhhhccccccc----cccccccce
Confidence 99999999999999999999999999999999999997654320 01111100000000 001112247
Q ss_pred EEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchH
Q 003364 696 VVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775 (826)
Q Consensus 696 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~ 775 (826)
+++|..++.+.++. +.++.......+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||+.||||||| |++++
T Consensus 638 vi~G~~l~~l~~~e---l~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiam-g~~G~ 713 (997)
T TIGR01106 638 VVHGSDLKDMTSEQ---LDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM-GIAGS 713 (997)
T ss_pred EEEhHHhhhCCHHH---HHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceec-CCccc
Confidence 88998887765432 222111122469999999999999999999999999999999999999999999999 86666
Q ss_pred HHH-hhccccccc--hhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHhhh
Q 003364 776 QAA-RAADYSIGK--FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825 (826)
Q Consensus 776 ~~~-~~Ad~v~~~--~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (826)
++. ++||+++.+ |..+.+ .+.|||++|.|+++++.|.++.|+...++.+
T Consensus 714 ~vak~aADivL~dd~f~~Iv~-ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~ 765 (997)
T TIGR01106 714 DVSKQAADMILLDDNFASIVT-GVEEGRLIFDNLKKSIAYTLTSNIPEITPFL 765 (997)
T ss_pred HHHHHhhceEEecCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 654 599999954 777777 4789999999999999999999997766654
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-94 Score=774.00 Aligned_cols=657 Identities=23% Similarity=0.346 Sum_probs=498.4
Q ss_pred ccccccCCCceEEeeccc-ccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccch----hhhhhhhhhhhhHHH
Q 003364 11 ETSQDLYCANRLSNRKYT-LMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTW----GPLIFIFAVSATKEA 85 (826)
Q Consensus 11 ~~r~~~~g~N~i~~~~~~-~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~----~~l~~i~~~~~~~~~ 85 (826)
++|++.||+|.++.++.. +| .++|+.+.+..-+++++++++++...+.......+| .+++.++ +-.+..+
T Consensus 126 ~~Rr~~fG~N~~p~k~~K~Fl----~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~-~VV~VtA 200 (1034)
T KOG0204|consen 126 ERRRKIFGSNTYPEKPPKGFL----RFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVI-LVVLVTA 200 (1034)
T ss_pred HHHHHhcCCCCCCCCCCccHH----HHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEE-EEEEEee
Confidence 559999999999998764 55 889999999998889999999987776544333333 2222221 1223455
Q ss_pred HHHHHhhhhh----HhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCC
Q 003364 86 WDDYNRYLSD----KKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETD 161 (826)
Q Consensus 86 ~~~~~~~~~~----~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~ 161 (826)
..||++.++. +...+.++.|+|||+.++|+..||+||||+.|+.||.+||||+++++++ +.+|||++||||.
T Consensus 201 ~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~----L~iDESSlTGESd 276 (1034)
T KOG0204|consen 201 VNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNS----LKIDESSLTGESD 276 (1034)
T ss_pred cchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccc----eeEecccccCCCc
Confidence 5666665543 4445678999999999999999999999999999999999999997776 9999999999999
Q ss_pred ceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEe
Q 003364 162 LKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241 (826)
Q Consensus 162 p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~t 241 (826)
+++|.+ ..+.++++||++.+| .+.++|+.+
T Consensus 277 ~v~k~~-------------------------------------------------~~dPfLlSGTkv~eG-sgkMlVTaV 306 (1034)
T KOG0204|consen 277 HVQKSL-------------------------------------------------DKDPFLLSGTKVMEG-SGKMLVTAV 306 (1034)
T ss_pred ceeccC-------------------------------------------------CCCCeEeecceeecC-cceEEEEEe
Confidence 999942 245689999999999 899999999
Q ss_pred CCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcch--hcc-ccc-ccc-ceeeCCCCCccchhh
Q 003364 242 GNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNV--WKD-TEA-RKQ-WYVLYPQEFPWYELL 313 (826)
Q Consensus 242 G~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~-~~~-~~~-~~~~~~~~~~~~~~~ 313 (826)
|.+|.+|++.. ......+|+|-.+++++..+..+.++++.+++++..+ +.+ ... ..+ |-........+..++
T Consensus 307 Gmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f 386 (1034)
T KOG0204|consen 307 GMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFF 386 (1034)
T ss_pred eecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHh
Confidence 99999998654 3344789999999999988777776666555443211 111 100 000 100000000111222
Q ss_pred hhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeE
Q 003364 314 VIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIF 393 (826)
Q Consensus 314 ~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v 393 (826)
.+++ .++..++|.+||.++.++....++ +|.+++ .++|.+++||+||..++||+|||||||+|+|+|
T Consensus 387 ~i~V---TilVVAVPEGLPLAVTLsLAys~k------kMmkD~----~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtV 453 (1034)
T KOG0204|consen 387 IIAV---TILVVAVPEGLPLAVTLSLAYSMK------KMMKDN----NLVRHLDACETMGSATAICSDKTGTLTTNRMTV 453 (1034)
T ss_pred hhee---EEEEEECCCCccHHHHHHHHHHHH------HHhcch----hHHHHhHHHhhcCCceEEEecCcCceEeeeEEE
Confidence 2222 256789999998655555544554 666666 689999999999999999999999999999999
Q ss_pred EEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHH-HHhhhceeeecccC-CCCceeeecCCccHHHHHHHHHhCCe
Q 003364 394 RRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFL-TVMAVCNTVIPAKS-KAGAILYKAQSQDEEALVHAAAQLHM 471 (826)
Q Consensus 394 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~c~~~~~~~~-~~~~~~~~~~~~~e~all~~a~~~~~ 471 (826)
.+.|+++..|..+.... ...++...+++ .+++...+...... +.+......|+|+|+||+.|+...|.
T Consensus 454 V~~~~~~~~~k~~~~~~----------~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~ 523 (1034)
T KOG0204|consen 454 VQSYIGSEHYKVNSPKS----------SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGM 523 (1034)
T ss_pred EeeeeccccccccCccc----------ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCc
Confidence 99999888776443221 12344555444 34444333333332 23323345799999999999999998
Q ss_pred EEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhc------------CCC
Q 003364 472 VLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA------------GQQ 539 (826)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~------------~~~ 539 (826)
++ +..+...++.+.+||+|.||+|+|+++.++++.| +|+|||+|.++..|.. ++.
T Consensus 524 ~~------------~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~ 590 (1034)
T KOG0204|consen 524 DF------------QDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDD 590 (1034)
T ss_pred ch------------HhhcchhheeEEeccCcccceeeEEEEcCCCCeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHH
Confidence 65 3445667889999999999999999998866655 9999999999999972 223
Q ss_pred hhHHHHHHHHHHHcCCeEEEEEEEecCHH--HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCc
Q 003364 540 TRTFVEAVEQYSQLGLRTLCLAWREVEED--EYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDG 617 (826)
Q Consensus 540 ~~~~~~~~~~~~~~G~rvl~~A~k~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~ 617 (826)
...+++.++.|+.+|+|++|+|||+.... +.++|.+ ....+.+++++|++|++||+||+
T Consensus 591 ~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~-------------------~~~~~~~lt~laivGIkDPvRPg 651 (1034)
T KOG0204|consen 591 RKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDN-------------------EELPEGGLTLLAIVGIKDPVRPG 651 (1034)
T ss_pred HHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccc-------------------cccCCCCeEEEEEeeccCCCCCC
Confidence 45688999999999999999999995543 1111110 02456899999999999999999
Q ss_pred hHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEE
Q 003364 618 VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVV 697 (826)
Q Consensus 618 ~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 697 (826)
+++||+.|+.+||.|.|+|||+..||+++|.+|||+.++.. ...++|.++.
T Consensus 652 V~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d--~~~lEG~eFr--------------------------- 702 (1034)
T KOG0204|consen 652 VPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD--FLALEGKEFR--------------------------- 702 (1034)
T ss_pred cHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc--cceecchhhh---------------------------
Confidence 99999999999999999999999999999999999998764 4444554443
Q ss_pred cChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHH
Q 003364 698 DGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQA 777 (826)
Q Consensus 698 ~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~ 777 (826)
.+.++... ....+..+++|-+|.+|..+|+.|+..++.|++.|||.||.|+|+.||||.|| |-+++++
T Consensus 703 ------~~s~ee~~-----~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAM-GIaGTeV 770 (1034)
T KOG0204|consen 703 ------ELSQEERD-----KIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAM-GIAGTEV 770 (1034)
T ss_pred ------hcCHHHHH-----hhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhc-cccchhh
Confidence 33222221 12345688999999999999999999999999999999999999999999999 9888888
Q ss_pred Hh-hccccc--cchhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHh
Q 003364 778 AR-AADYSI--GKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFI 823 (826)
Q Consensus 778 ~~-~Ad~v~--~~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~ 823 (826)
++ +||+++ ++|..+.+ .+.|||+.|.+++|+++|.+.-|++-.++
T Consensus 771 AKEaSDIIi~DDNFssIVk-~v~WGR~VY~nIqKFiQFQLTVNVvAliv 818 (1034)
T KOG0204|consen 771 AKEASDIIILDDNFSSIVK-AVKWGRNVYDNIQKFLQFQLTVNVVALIV 818 (1034)
T ss_pred hhhhCCeEEEcCchHHHHH-HHHhhhHHHHHHHHhheeEEEEEEEeehh
Confidence 77 999998 56677777 67899999999999999999888754433
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-92 Score=844.97 Aligned_cols=653 Identities=22% Similarity=0.300 Sum_probs=486.6
Q ss_pred CccccccCCCceEEeeccc-ccccccHHHHHHhhhHHHHHHHHHHHHhhccCcc-----ccCcccchh---hhhhhhhhh
Q 003364 10 DETSQDLYCANRLSNRKYT-LMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT-----PVNPASTWG---PLIFIFAVS 80 (826)
Q Consensus 10 ~~~r~~~~g~N~i~~~~~~-~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~-----~~~~~~~~~---~l~~i~~~~ 80 (826)
.++|+++||+|+++.++.+ +| ..++++|++|++++++++++++++.... ..++...|. .+++++++.
T Consensus 66 v~~r~~~yG~N~l~~~~~~s~~----~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~ 141 (941)
T TIGR01517 66 LERREKVYGKNELPEKPPKSFL----QIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILV 141 (941)
T ss_pred HHHHHHHhCCCCCCCCCCCCHH----HHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHH
Confidence 4679999999999998774 55 8899999999999999999998875421 122222332 223334445
Q ss_pred hhHHHHHHHHhhhhhHh----hcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCC
Q 003364 81 ATKEAWDDYNRYLSDKK----ANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAAL 156 (826)
Q Consensus 81 ~~~~~~~~~~~~~~~~~----~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~l 156 (826)
.++.+++++++.++.++ .++.+++|+|||++++|++++|+|||||.|++||+|||||+|++++ .+.||||+|
T Consensus 142 ~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~----~l~VdES~L 217 (941)
T TIGR01517 142 VLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGL----SLEIDESSI 217 (941)
T ss_pred hHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcC----cEEEEeccc
Confidence 56677777776554333 3467899999999999999999999999999999999999999433 599999999
Q ss_pred CCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEE
Q 003364 157 DGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACG 236 (826)
Q Consensus 157 TGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~ 236 (826)
||||.|+.|.+ ...|++|+||.+.+| .+.+
T Consensus 218 TGES~pv~K~~-------------------------------------------------~~~n~v~~GT~v~~G-~~~~ 247 (941)
T TIGR01517 218 TGESDPIKKGA-------------------------------------------------PKDSFLLSGTVVNEG-SGRM 247 (941)
T ss_pred CCCCCcccccC-------------------------------------------------CCCceEEeCCeEEee-EEEE
Confidence 99999999953 234789999999999 7999
Q ss_pred EEEEeCCcceeeccCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcch---hccccccccceeeCCCCCccch
Q 003364 237 VAVYTGNETKLGMTRGI--PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNV---WKDTEARKQWYVLYPQEFPWYE 311 (826)
Q Consensus 237 ~V~~tG~~T~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 311 (826)
+|++||.+|.+|++.+. ...+++++++.++++...+..++++++++.++++.. +.....+. +.......++..
T Consensus 248 iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 325 (941)
T TIGR01517 248 LVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDG--RDTEEDAQTFLD 325 (941)
T ss_pred EEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc--cccchhhHHHHH
Confidence 99999999999986442 122557999999999988877766655554443321 11000000 000000012222
Q ss_pred hhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCccccccee
Q 003364 312 LLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRM 391 (826)
Q Consensus 312 ~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~ 391 (826)
.+ ..++.++..++|++||++++++...+.. +|.+++ +++|+++++|+||++|+||||||||||+|+|
T Consensus 326 ~~---~~al~llv~~iP~~Lp~~vti~l~~~~~------~mak~~----ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m 392 (941)
T TIGR01517 326 HF---IIAVTIVVVAVPEGLPLAVTIALAYSMK------KMMKDN----NLVRHLAACETMGSATAICSDKTGTLTQNVM 392 (941)
T ss_pred HH---HHHHHHHHhhCCCchHHHHHHHHHHHHH------HHHhCC----CEEechHHhhhccCceEEEEcCcCceeeceE
Confidence 22 3334467788999998777777666655 555554 8999999999999999999999999999999
Q ss_pred eEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCe
Q 003364 392 IFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHM 471 (826)
Q Consensus 392 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~ 471 (826)
+|.+++..+..+..+.. . ...++...+++...+.||+..+...++..-.+..+||+|.|+++++.+.+.
T Consensus 393 ~v~~~~~~~~~~~~~~~--------~---~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~ 461 (941)
T TIGR01517 393 SVVQGYIGEQRFNVRDV--------L---RNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGR 461 (941)
T ss_pred EEEEEEEecceEecCcc--------c---ccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCC
Confidence 99999876544432210 0 001123445555555666554322111111244689999999999987663
Q ss_pred EEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhc-----CC------Ch
Q 003364 472 VLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA-----GQ------QT 540 (826)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~-----~~------~~ 540 (826)
... ..+..+++++.+||++++|||+++++.. ++++++|+|||||.++++|+. +. .+
T Consensus 462 ~~~------------~~~~~~~~~~~~pF~s~~k~msvv~~~~-~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~ 528 (941)
T TIGR01517 462 DYQ------------EVRAEEKVVKIYPFNSERKFMSVVVKHS-GGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDK 528 (941)
T ss_pred CHH------------HHHhhchhccccccCCCCCeEEEEEEeC-CCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHH
Confidence 210 0123466788999999999999999874 467899999999999999963 11 13
Q ss_pred hHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHH
Q 003364 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPE 620 (826)
Q Consensus 541 ~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~ 620 (826)
+++.+.+++++.+|+||+++|||.++.++.+.+ +..|+||+|+|+++++|++|+++++
T Consensus 529 ~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~----------------------~~~e~~l~~lGli~~~Dplr~~~~~ 586 (941)
T TIGR01517 529 DRCADVIEPLASDALRTICLAYRDFAPEEFPRK----------------------DYPNGGLTLIGVVGIKDPLRPGVRE 586 (941)
T ss_pred HHHHHHHHHHHhcCCEEEEEEEEecCccccccc----------------------cccccCcEEEEEeeccCCCchhHHH
Confidence 567888899999999999999999875442211 2246899999999999999999999
Q ss_pred HHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcCh
Q 003364 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (826)
Q Consensus 621 aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 700 (826)
+|++|+++|++++|+|||+..+|.++|+++||..++.. +++|.
T Consensus 587 aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~-------------------------------------vi~G~ 629 (941)
T TIGR01517 587 AVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGL-------------------------------------AMEGK 629 (941)
T ss_pred HHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCce-------------------------------------EeeHH
Confidence 99999999999999999999999999999999764321 33343
Q ss_pred hHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecC-CchHHHHh
Q 003364 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG-REGLQAAR 779 (826)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g-n~~~~~~~ 779 (826)
.++.+.++. +.. ...+..+|+|++|+||.++|+.+|+.++.|+|+|||.||+|||++||||||| | ++.+-+++
T Consensus 630 ~~~~l~~~e---l~~--~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAm-g~~gtdvAk~ 703 (941)
T TIGR01517 630 EFRRLVYEE---MDP--ILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSM-GISGTEVAKE 703 (941)
T ss_pred HhhhCCHHH---HHH--HhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceec-CCCccHHHHH
Confidence 333222111 111 1234689999999999999999999999999999999999999999999999 7 44444556
Q ss_pred hcccccc--chhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHhhh
Q 003364 780 AADYSIG--KFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825 (826)
Q Consensus 780 ~Ad~v~~--~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (826)
+||+++. +|..+.+. +.+||++|+|+++++.|.+++|+...++.+
T Consensus 704 aADivL~dd~f~~I~~~-i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~ 750 (941)
T TIGR01517 704 ASDIILLDDNFASIVRA-VKWGRNVYDNIRKFLQFQLTVNVVAVILTF 750 (941)
T ss_pred hCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999995 67777774 589999999999999999999997766654
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-90 Score=825.09 Aligned_cols=669 Identities=23% Similarity=0.290 Sum_probs=494.6
Q ss_pred HHHHhhhHHHHHHHHHHHHhhccCcccc-----CcccchhhhhhhhhhhhhHHHHHHHHhhhhh---HhhcceEEEEEeC
Q 003364 37 LWEQFSRFMNQYFLLIACLQLWSLITPV-----NPASTWGPLIFIFAVSATKEAWDDYNRYLSD---KKANEKEVWVVKQ 108 (826)
Q Consensus 37 l~~~~~~~~n~~~l~~~~l~~~~~~~~~-----~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~V~r~ 108 (826)
+++||++|++++++++++++++..+... ..+.....+++++++++++.+++++++.++. +++.+.+++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 4689999999999999999988654321 1122224445566677888999999887654 4456789999999
Q ss_pred CeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeeeccccccCCCHhhhccceEEEEc
Q 003364 109 GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIEC 188 (826)
Q Consensus 109 g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~ 188 (826)
|++++|++++|||||||.|++||+|||||+|+++++ +.||||+|||||.|+.|.+....
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~~----------------- 139 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESVP----------------- 139 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCcccccccccC-----------------
Confidence 999999999999999999999999999999996544 99999999999999999643110
Q ss_pred cCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcceeeccCC---CCCCccchHHHHH
Q 003364 189 PGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMI 265 (826)
Q Consensus 189 ~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~ 265 (826)
+....+.+.+|++|+||.+.+| .+.++|++||.+|++|++.+ ..+.+++++++.+
T Consensus 140 ---------------------~~~~~~~~~~n~l~~GT~v~~G-~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l 197 (917)
T TIGR01116 140 ---------------------DERAVNQDKKNMLFSGTLVVAG-KARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKL 197 (917)
T ss_pred ---------------------ccccCcccccceeeeCCEEecc-eEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHH
Confidence 0111123567999999999999 79999999999999998543 4566789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhh-HHHHHhcccccceehhhHHHHHHHHHH
Q 003364 266 DKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPL-RFELLCSIMIPISIKVSLDLVKSLYAK 344 (826)
Q Consensus 266 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~iP~~l~v~l~~~~~~~~~ 344 (826)
++++..++.+.++++++.++++..+ |........|...+...+ ..+.++..++|++||++++++...+++
T Consensus 198 ~~~~~~l~~~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~ 268 (917)
T TIGR01116 198 DEFGELLSKVIGLICILVWVINIGH---------FNDPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTR 268 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---------hccccccchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHH
Confidence 9999888777666665554433211 000001112222111111 122356788999999999998888887
Q ss_pred HhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCeee------cCCCCCcccc-hhhh
Q 003364 345 FIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFY------GNETGDALKD-VGLL 417 (826)
Q Consensus 345 ~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~------~~~~~~~~~~-~~~~ 417 (826)
+|.+++ +++|+++++|+||++|+||||||||||+|+|+|.+++..+..+ ..... .... .+..
T Consensus 269 ------~m~~~~----ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 337 (917)
T TIGR01116 269 ------KMAKKN----AIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGT-TYAPEGGVI 337 (917)
T ss_pred ------HHHHCC----cEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCC-ccCCCcccc
Confidence 454443 8999999999999999999999999999999999998765321 10000 0000 0000
Q ss_pred hh---h-ccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEeecCceEEEEeCC----eE
Q 003364 418 NA---I-TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNG----SV 489 (826)
Q Consensus 418 ~~---~-~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~~~~~~----~~ 489 (826)
.. . ...++....++.++++||++....++++......|||+|.|+++++.+.|+...............+ ..
T Consensus 338 ~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 417 (917)
T TIGR01116 338 KDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWN 417 (917)
T ss_pred ccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHH
Confidence 00 0 0012335678889999998765433222111125899999999999998876543322222111111 23
Q ss_pred EEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhc-----CC-------ChhHHHHHHHHHHH-cCCe
Q 003364 490 LQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA-----GQ-------QTRTFVEAVEQYSQ-LGLR 556 (826)
Q Consensus 490 ~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~-----~~-------~~~~~~~~~~~~~~-~G~r 556 (826)
..|++++.+||+|+||||+|+++. ++++++|+|||||.|+++|+. +. ..+++.+.++++++ +|+|
T Consensus 418 ~~~~~~~~~pF~s~rK~msviv~~--~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlR 495 (917)
T TIGR01116 418 DKFKKLATLEFSRDRKSMSVLCKP--STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALR 495 (917)
T ss_pred hhcceeeecccChhhCeEEEEEee--CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCe
Confidence 467899999999999999999986 467899999999999999963 11 23457788999999 9999
Q ss_pred EEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEc
Q 003364 557 TLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLT 636 (826)
Q Consensus 557 vl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~T 636 (826)
|+++|||.++.++... . ..+ ...++.+|+||+|+|+++++||+|++++++|++|+++|++++|+|
T Consensus 496 vl~~A~k~~~~~~~~~-~---------~~~-----~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miT 560 (917)
T TIGR01116 496 CLALAFKDIPDPREED-L---------LSD-----PANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMIT 560 (917)
T ss_pred EEEEEEEECCcccccc-c---------ccc-----chhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEec
Confidence 9999999987632110 0 000 012245789999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhh
Q 003364 637 GDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTEL 716 (826)
Q Consensus 637 Gd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 716 (826)
||+..+|.++|+++|+..++...... .++|..++.+.++.. .
T Consensus 561 GD~~~tA~~ia~~~gi~~~~~~v~~~---------------------------------~~~g~~l~~~~~~~~-----~ 602 (917)
T TIGR01116 561 GDNKETAEAICRRIGIFSPDEDVTFK---------------------------------SFTGREFDEMGPAKQ-----R 602 (917)
T ss_pred CCCHHHHHHHHHHcCCCCCCccccce---------------------------------eeeHHHHhhCCHHHH-----H
Confidence 99999999999999997654321011 223333222211111 1
Q ss_pred ccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccc--hhcchhh
Q 003364 717 AILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK--FRFLKRL 794 (826)
Q Consensus 717 ~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~--~~~l~~l 794 (826)
....+..+|+|++|+||.++++.++..++.|+|+|||.||++||+.||+|||| |++.+.++++||+++.+ |..+.+.
T Consensus 603 ~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~-g~g~~~ak~aAD~vl~dd~f~~i~~~ 681 (917)
T TIGR01116 603 AACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAM-GSGTEVAKEASDMVLADDNFATIVAA 681 (917)
T ss_pred HhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEEC-CCCcHHHHHhcCeEEccCCHHHHHHH
Confidence 12344689999999999999999999999999999999999999999999999 77766667799999965 7888885
Q ss_pred eeecchhhHHHHHHHHHHHhhhhHHHHHhhh
Q 003364 795 ILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825 (826)
Q Consensus 795 ~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (826)
+.|||++|+|+++++.|.+++|+...++++
T Consensus 682 -i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~ 711 (917)
T TIGR01116 682 -VEEGRAIYNNMKQFIRYMISSNIGEVVCIF 711 (917)
T ss_pred -HHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 689999999999999999999998777654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-89 Score=811.77 Aligned_cols=641 Identities=22% Similarity=0.278 Sum_probs=489.1
Q ss_pred CccccccCCCceEEeecc-cccccccHHHHHHh-hhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHH
Q 003364 10 DETSQDLYCANRLSNRKY-TLMNFLPKNLWEQF-SRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWD 87 (826)
Q Consensus 10 ~~~r~~~~g~N~i~~~~~-~~~~~l~~~l~~~~-~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~ 87 (826)
.++|+++||+|+++.++. ++| +.|+++| ++|++++++++++++++.. .+. ....+++++++..+..+++
T Consensus 30 v~~r~~~~G~N~i~~~~~~s~~----~~~l~~~~~~~~~~~L~~aa~ls~~~g----~~~-~~~~i~~~i~~~~~i~~~q 100 (884)
T TIGR01522 30 ASHRRAFHGWNEFDVEEDESLW----KKFLSQFVKNPLILLLIASAVISVFMG----NID-DAVSITLAILIVVTVGFVQ 100 (884)
T ss_pred HHHHHHhcCCCcCCCCCCCCHH----HHHHHHHhhChHHHHHHHHHHHHHHHc----chh-hHHHHHhHHHHHHHHHHHH
Confidence 467999999999998865 566 8899999 8999988888888887643 122 2233333445566788899
Q ss_pred HHHhhhhh---HhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCcee
Q 003364 88 DYNRYLSD---KKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKT 164 (826)
Q Consensus 88 ~~~~~~~~---~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~ 164 (826)
++++.++. +++.+.+++|+|||++++|++++|||||||.|++||+|||||+|+++++ +.||||+|||||.|+.
T Consensus 101 e~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~----l~VDES~LTGES~pv~ 176 (884)
T TIGR01522 101 EYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD----LSIDESNLTGETTPVS 176 (884)
T ss_pred HHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc----eEEEcccccCCCccee
Confidence 99876654 4556789999999999999999999999999999999999999995443 8999999999999999
Q ss_pred eeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCc
Q 003364 165 RLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNE 244 (826)
Q Consensus 165 K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~ 244 (826)
|.+.+... +........+|.+|+||.+.+| .+.++|++||.+
T Consensus 177 K~~~~~~~-------------------------------------~~~~~~~~~~n~v~~GT~v~~G-~~~~~V~~tG~~ 218 (884)
T TIGR01522 177 KVTAPIPA-------------------------------------ATNGDLAERSNIAFMGTLVRCG-HGKGIVVGTGSN 218 (884)
T ss_pred cccccccc-------------------------------------cccccccccCceEEeCCEEEee-eEEEEEEEecCc
Confidence 97542100 0001122567899999999999 799999999999
Q ss_pred ceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhhHHHH
Q 003364 245 TKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFEL 321 (826)
Q Consensus 245 T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (826)
|.+|++.+ ..+..++++++.+++++.++.+++++++++++++++. ...+|...+..++ .
T Consensus 219 T~~gki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~v---~ 280 (884)
T TIGR01522 219 TEFGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWF---------------QGKDWLEMFTISV---S 280 (884)
T ss_pred cHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------hcCCHHHHHHHHH---H
Confidence 99998644 3455679999999999988777665554444443321 1123344443333 3
Q ss_pred HhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCe
Q 003364 322 LCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGI 401 (826)
Q Consensus 322 l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~ 401 (826)
++..++|++||+++.++...+.+ +|.+++ +++|++.++|+||++|+||||||||||+|+|.|.+++..+.
T Consensus 281 llv~aiP~~Lp~~vt~~l~~~~~------r~ak~~----ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~ 350 (884)
T TIGR01522 281 LAVAAIPEGLPIIVTVTLALGVL------RMSKKR----AIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDG 350 (884)
T ss_pred HHHHHccchHHHHHHHHHHHHHH------HHhhcC----CcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCc
Confidence 56678999999877777766665 555554 89999999999999999999999999999999999987654
Q ss_pred eecCCCCCcc-cchhhhh----hhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEee
Q 003364 402 FYGNETGDAL-KDVGLLN----AITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNK 476 (826)
Q Consensus 402 ~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~ 476 (826)
.+........ ...+... .....++...+++.+.++||+......+ + ...+||+|.|+++++.+.|+..
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~---~~~g~p~e~All~~~~~~~~~~--- 423 (884)
T TIGR01522 351 LHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEA-D---TLLGNPTDVALIELLMKFGLDD--- 423 (884)
T ss_pred eEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCeecCCC-C---CcCCChHHHHHHHHHHHcCcHh---
Confidence 3211000000 0000000 0011134556788889999987543221 1 1247999999999998876521
Q ss_pred cCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhc-----CC-------ChhHHH
Q 003364 477 NASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA-----GQ-------QTRTFV 544 (826)
Q Consensus 477 ~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~-----~~-------~~~~~~ 544 (826)
....++.++.+||+|++|||+++++...++++++|+||+||.|+..|+. +. .++.+.
T Consensus 424 -----------~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~ 492 (884)
T TIGR01522 424 -----------LRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQ 492 (884)
T ss_pred -----------HHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHH
Confidence 1234677889999999999999998766678999999999999999963 11 134567
Q ss_pred HHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHH
Q 003364 545 EAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIET 624 (826)
Q Consensus 545 ~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~ 624 (826)
+.+++++.+|+||+++|||.++ .+|+|+|+++++|++||+++++|++
T Consensus 493 ~~~~~~a~~G~rvl~~A~~~~~---------------------------------~~l~~lGli~l~Dp~r~~~~~~i~~ 539 (884)
T TIGR01522 493 EEAAEMASAGLRVIAFASGPEK---------------------------------GQLTFLGLVGINDPPRPGVKEAVTT 539 (884)
T ss_pred HHHHHHHhcCCEEEEEEEEcCC---------------------------------CCeEEEEEEeccCcchhHHHHHHHH
Confidence 7888999999999999998652 5899999999999999999999999
Q ss_pred HHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHH
Q 003364 625 LRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEI 704 (826)
Q Consensus 625 l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 704 (826)
|+++|++++|+|||+..+|.++|+++|+...... +++|..++.
T Consensus 540 l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~-------------------------------------~v~g~~l~~ 582 (884)
T TIGR01522 540 LITGGVRIIMITGDSQETAVSIARRLGMPSKTSQ-------------------------------------SVSGEKLDA 582 (884)
T ss_pred HHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCc-------------------------------------eeEhHHhHh
Confidence 9999999999999999999999999999765332 122332222
Q ss_pred HHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHH-hhccc
Q 003364 705 ALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA-RAADY 783 (826)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~-~~Ad~ 783 (826)
+.++. +.. ...+..+|+|++|++|..+++.++..++.|+|+|||.||+|||+.||||||| |.++++++ ++||+
T Consensus 583 ~~~~~---l~~--~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~-g~~g~~va~~aaDi 656 (884)
T TIGR01522 583 MDDQQ---LSQ--IVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAM-GQTGTDVAKEAADM 656 (884)
T ss_pred CCHHH---HHH--HhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEec-CCCcCHHHHHhcCE
Confidence 21111 111 1245689999999999999999999999999999999999999999999999 75555565 59999
Q ss_pred cc--cchhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHhh
Q 003364 784 SI--GKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQ 824 (826)
Q Consensus 784 v~--~~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~ 824 (826)
++ +++..+.. .+.+||.+|+|+++++.|.+..|+...++.
T Consensus 657 vl~dd~~~~i~~-~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~ 698 (884)
T TIGR01522 657 ILTDDDFATILS-AIEEGKGIFNNIKNFITFQLSTSVAALSLI 698 (884)
T ss_pred EEcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 99 55677777 477999999999999999999998766543
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-89 Score=807.77 Aligned_cols=620 Identities=20% Similarity=0.256 Sum_probs=475.6
Q ss_pred CCccccccCCCceEEeeccc-ccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHH
Q 003364 9 DDETSQDLYCANRLSNRKYT-LMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWD 87 (826)
Q Consensus 9 ~~~~r~~~~g~N~i~~~~~~-~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~ 87 (826)
+.++|+++||+|+++.++++ +| ..|+++|++|++++++++++++++.. .+.....++++++++.++++++
T Consensus 72 ea~~r~~~~G~N~l~~~~~~s~~----~~~~~~~~~p~~~lL~~aa~ls~~~~-----~~~~a~~I~~iv~i~~~i~~~q 142 (902)
T PRK10517 72 EVESAREQHGENELPAQKPLPWW----VHLWVCYRNPFNILLTILGAISYATE-----DLFAAGVIALMVAISTLLNFIQ 142 (902)
T ss_pred HHHHHHHhcCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHc-----cHHHHHHHHHHHHHHHHHHHHH
Confidence 34679999999999998875 56 89999999999988888888887643 2333445556677788899999
Q ss_pred HHHhhhh---hHhhcceEEEEEeC------CeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCC
Q 003364 88 DYNRYLS---DKKANEKEVWVVKQ------GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDG 158 (826)
Q Consensus 88 ~~~~~~~---~~~~~~~~~~V~r~------g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTG 158 (826)
++++.++ ++++.+.+++|+|| |++++|++++|||||||.|++||+|||||+|+++++ +.||||+|||
T Consensus 143 e~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES~LTG 218 (902)
T PRK10517 143 EARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQASLTG 218 (902)
T ss_pred HHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEecCcCC
Confidence 9998754 56667889999999 789999999999999999999999999999995444 8999999999
Q ss_pred CCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEE
Q 003364 159 ETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVA 238 (826)
Q Consensus 159 Es~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V 238 (826)
||.|+.|.+.+.. +.+....+.+|.+|+||.+.+| .+.++|
T Consensus 219 ES~PV~K~~~~~~--------------------------------------~~~~~~~~~~n~vfaGT~V~~G-~~~~vV 259 (902)
T PRK10517 219 ESLPVEKFATTRQ--------------------------------------PEHSNPLECDTLCFMGTNVVSG-TAQAVV 259 (902)
T ss_pred CCCceeccccccc--------------------------------------ccccCccccccceeeCceEeee-eEEEEE
Confidence 9999999754210 0111223577999999999999 799999
Q ss_pred EEeCCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhh
Q 003364 239 VYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVI 315 (826)
Q Consensus 239 ~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (826)
++||.+|.+|++.+ ..+.+++++++.+++++.++..++++++.++++++... ..+|...+.+
T Consensus 260 ~atG~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~---------------~~~~~~~l~~ 324 (902)
T PRK10517 260 IATGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYT---------------KGDWWEAALF 324 (902)
T ss_pred EEeccccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHh---------------cCCHHHHHHH
Confidence 99999999998754 34567899999999999888777776666555443211 1234444443
Q ss_pred hhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEE
Q 003364 316 PLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRR 395 (826)
Q Consensus 316 ~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~ 395 (826)
+++ ++..++|++||+++.++...++. +|.+++ +++|+++++|+||++|+||||||||||+|+|+|.+
T Consensus 325 als---v~V~~~Pe~LP~~vt~~la~g~~------~mak~~----ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~ 391 (902)
T PRK10517 325 ALS---VAVGLTPEMLPMIVTSTLARGAV------KLSKQK----VIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLEN 391 (902)
T ss_pred HHH---HHHHHcccHHHHHHHHHHHHHHH------HHHhCC----cEEecchhhhhccCCCEEEecCCCccccceEEEEE
Confidence 433 45568899998777666666554 555544 89999999999999999999999999999999988
Q ss_pred EEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEe
Q 003364 396 CCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVN 475 (826)
Q Consensus 396 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~ 475 (826)
++... + .+..+++...++|.... ...+||.|.|+++++...+.
T Consensus 392 ~~~~~---~--------------------~~~~~ll~~a~l~~~~~----------~~~~~p~d~All~~a~~~~~---- 434 (902)
T PRK10517 392 HTDIS---G--------------------KTSERVLHSAWLNSHYQ----------TGLKNLLDTAVLEGVDEESA---- 434 (902)
T ss_pred EecCC---C--------------------CCHHHHHHHHHhcCCcC----------CCCCCHHHHHHHHHHHhcch----
Confidence 63100 0 00122333333332211 11479999999999865321
Q ss_pred ecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhc----CC-------ChhHHH
Q 003364 476 KNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA----GQ-------QTRTFV 544 (826)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~----~~-------~~~~~~ 544 (826)
......|+.+..+||++++|+|+++++.. ++.+.+++||+||.++++|+. +. ..+.+.
T Consensus 435 ----------~~~~~~~~~~~~~pFds~~k~msvvv~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 503 (902)
T PRK10517 435 ----------RSLASRWQKIDEIPFDFERRRMSVVVAEN-TEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIK 503 (902)
T ss_pred ----------hhhhhcCceEEEeeeCCCcceEEEEEEEC-CCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHH
Confidence 01123466778899999999999999864 466789999999999999963 11 134566
Q ss_pred HHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHH
Q 003364 545 EAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIET 624 (826)
Q Consensus 545 ~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~ 624 (826)
+..++++.+|+||+++|||.++.++.. + ....|+|++|+|+++|+||+||+++++|++
T Consensus 504 ~~~~~~a~~G~rvlavA~k~~~~~~~~-~---------------------~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~ 561 (902)
T PRK10517 504 RVTDTLNRQGLRVVAVATKYLPAREGD-Y---------------------QRADESDLILEGYIAFLDPPKETTAPALKA 561 (902)
T ss_pred HHHHHHHhcCCEEEEEEEecCCccccc-c---------------------ccccccCceeeehHhhhCcchhhHHHHHHH
Confidence 778889999999999999988653210 0 011368999999999999999999999999
Q ss_pred HHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHH
Q 003364 625 LRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEI 704 (826)
Q Consensus 625 l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 704 (826)
|+++||+++|+|||+..+|.++|+++||... . +++|..++.
T Consensus 562 l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~--~-------------------------------------v~~G~el~~ 602 (902)
T PRK10517 562 LKASGVTVKILTGDSELVAAKVCHEVGLDAG--E-------------------------------------VLIGSDIET 602 (902)
T ss_pred HHHCCCEEEEEcCCCHHHHHHHHHHcCCCcc--C-------------------------------------ceeHHHHHh
Confidence 9999999999999999999999999999421 1 123333322
Q ss_pred HHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhcccc
Q 003364 705 ALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYS 784 (826)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v 784 (826)
+.++. +.. ...+..+|+|++|+||.++|+.+|..|+.|+|+|||.||+|||+.||||||| |++.+-++++||+|
T Consensus 603 l~~~e---l~~--~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAm-g~gtdvAkeaADiV 676 (902)
T PRK10517 603 LSDDE---LAN--LAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISV-DGAVDIAREAADII 676 (902)
T ss_pred CCHHH---HHH--HHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEe-CCcCHHHHHhCCEE
Confidence 21111 111 1234579999999999999999999999999999999999999999999999 76655566699999
Q ss_pred cc--chhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHhh
Q 003364 785 IG--KFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQ 824 (826)
Q Consensus 785 ~~--~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~ 824 (826)
+. ++..+.. .+.+||++|+|+++++.|.+..|+...+..
T Consensus 677 Lldd~~~~I~~-ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~ 717 (902)
T PRK10517 677 LLEKSLMVLEE-GVIEGRRTFANMLKYIKMTASSNFGNVFSV 717 (902)
T ss_pred EecCChHHHHH-HHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 94 4555555 467899999999999999999998655543
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-88 Score=801.21 Aligned_cols=635 Identities=21% Similarity=0.272 Sum_probs=471.8
Q ss_pred CCccccccCCCceEEeeccc-ccccccHHHHHHhhhHHHHHHHHHHHHhhccCcccc------Ccccchhhhhhhhhhhh
Q 003364 9 DDETSQDLYCANRLSNRKYT-LMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPV------NPASTWGPLIFIFAVSA 81 (826)
Q Consensus 9 ~~~~r~~~~g~N~i~~~~~~-~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~------~~~~~~~~l~~i~~~~~ 81 (826)
+.++|+++||+|+++.++.+ +| +.|+++|++|++++++++++++++...... ..+...+.++++++++.
T Consensus 50 ea~~rl~~~G~N~l~~~~~~~~~----~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~ 125 (903)
T PRK15122 50 DAAERLQRYGPNEVAHEKPPHAL----VQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSG 125 (903)
T ss_pred HHHHHHHhcCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHHHHH
Confidence 34679999999999987764 66 889999999999999999998887532110 11223344555667788
Q ss_pred hHHHHHHHHhhhh---hHhhcceEEEEEeCC------eEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEE
Q 003364 82 TKEAWDDYNRYLS---DKKANEKEVWVVKQG------IKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVE 152 (826)
Q Consensus 82 ~~~~~~~~~~~~~---~~~~~~~~~~V~r~g------~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vd 152 (826)
++++++++++.++ ++++.+.+++|+||| ++++|++++|+|||+|.|++||+|||||+|+++++ +.||
T Consensus 126 ~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~----l~VD 201 (903)
T PRK15122 126 LLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD----LFIS 201 (903)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc----eEEE
Confidence 8999999988654 556677899999994 89999999999999999999999999999996544 7999
Q ss_pred cCCCCCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCc
Q 003364 153 TAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTE 232 (826)
Q Consensus 153 es~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~ 232 (826)
||+|||||.|+.|.+.+.. +....+. ...+.+....+.+|.+|+||.+.+|
T Consensus 202 ES~LTGES~PV~K~~~~~~--------------~~~~~~~--------------~~~~~~~~~~~~~n~vfaGT~V~~G- 252 (903)
T PRK15122 202 QAVLTGEALPVEKYDTLGA--------------VAGKSAD--------------ALADDEGSLLDLPNICFMGTNVVSG- 252 (903)
T ss_pred ccccCCCCcceeeeccccc--------------ccccccc--------------ccccccCCcccccceEEeCCEEEee-
Confidence 9999999999999642000 0000000 0001112223578999999999999
Q ss_pred eEEEEEEEeCCcceeeccCCCC--CCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccc
Q 003364 233 WACGVAVYTGNETKLGMTRGIP--EPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWY 310 (826)
Q Consensus 233 ~~~~~V~~tG~~T~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (826)
.+.++|++||.+|.+|++.+.. ...++++++.++++...+..++++++.+.+++.... ..+|.
T Consensus 253 ~~~~~V~atG~~T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~---------------~~~~~ 317 (903)
T PRK15122 253 TATAVVVATGSRTYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT---------------KGDWL 317 (903)
T ss_pred eEEEEEEEeccccHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc---------------cCCHH
Confidence 7999999999999999875532 445689999999998877766665554444332111 12334
Q ss_pred hhhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccce
Q 003364 311 ELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENR 390 (826)
Q Consensus 311 ~~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~ 390 (826)
..+.+++ .++..++|++||+++.++...+.. +|.+++ +++|++.++|+||++|+||||||||||+|+
T Consensus 318 ~~l~~ai---sl~V~~~Pe~Lp~~vt~~La~g~~------~mak~~----ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~ 384 (903)
T PRK15122 318 EALLFAL---AVAVGLTPEMLPMIVSSNLAKGAI------AMARRK----VVVKRLNAIQNFGAMDVLCTDKTGTLTQDR 384 (903)
T ss_pred HHHHHHH---HHHHHHccchHHHHHHHHHHHHHH------HHHHcC----CeecccchhhhhcCCcEEEecCCcccccCe
Confidence 4444333 345677899998777666665554 455544 899999999999999999999999999999
Q ss_pred eeEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCC
Q 003364 391 MIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLH 470 (826)
Q Consensus 391 ~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~ 470 (826)
|+|.+++..+. .. + .+++...++| +.. +. ..+||.|.|+++++.+.+
T Consensus 385 m~V~~~~~~~~---------~~-----------~---~~~l~~a~l~-s~~----~~-----~~~~p~e~All~~a~~~~ 431 (903)
T PRK15122 385 IILEHHLDVSG---------RK-----------D---ERVLQLAWLN-SFH----QS-----GMKNLMDQAVVAFAEGNP 431 (903)
T ss_pred EEEEEEEcCCC---------CC-----------h---HHHHHHHHHh-CCC----CC-----CCCChHHHHHHHHHHHcC
Confidence 99998763211 00 0 1122222222 110 01 147999999999998765
Q ss_pred eEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcC----C-------C
Q 003364 471 MVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG----Q-------Q 539 (826)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~----~-------~ 539 (826)
... ....++.+..+||++.+++|+++++.. ++++++++||+||.++++|+.- . .
T Consensus 432 ~~~--------------~~~~~~~~~~~pF~s~~k~ms~v~~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~ 496 (903)
T PRK15122 432 EIV--------------KPAGYRKVDELPFDFVRRRLSVVVEDA-QGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEAR 496 (903)
T ss_pred chh--------------hhhcCceEEEeeeCCCcCEEEEEEEcC-CCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHH
Confidence 320 122466778899999999999999864 5678999999999999999631 1 1
Q ss_pred hhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchH
Q 003364 540 TRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVP 619 (826)
Q Consensus 540 ~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~ 619 (826)
++++.+..+.++.+|+||+++|||.++.++.... ..+..|+|++|+|+++|+||+||+++
T Consensus 497 ~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~--------------------~~~~~e~~l~~lGli~l~Dp~R~~a~ 556 (903)
T PRK15122 497 RERLLALAEAYNADGFRVLLVATREIPGGESRAQ--------------------YSTADERDLVIRGFLTFLDPPKESAA 556 (903)
T ss_pred HHHHHHHHHHHHhCCCEEEEEEEeccCccccccc--------------------cccccccCcEEEEEEeccCccHHHHH
Confidence 3456777889999999999999998865431100 00234689999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcC
Q 003364 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (826)
Q Consensus 620 ~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 699 (826)
++|++|+++||+++|+|||+..+|.++|+++||... . +++|
T Consensus 557 ~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~--~-------------------------------------vi~G 597 (903)
T PRK15122 557 PAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPG--E-------------------------------------PLLG 597 (903)
T ss_pred HHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC--C-------------------------------------ccch
Confidence 999999999999999999999999999999999421 1 1223
Q ss_pred hhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHh
Q 003364 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR 779 (826)
Q Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~ 779 (826)
..++.+.++. +.. ...+..+|+|++|+||.++|+.||..|+.|+|+|||.||+|||+.||||||| |++.+-+++
T Consensus 598 ~el~~~~~~e---l~~--~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAm-g~gtdvAke 671 (903)
T PRK15122 598 TEIEAMDDAA---LAR--EVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISV-DSGADIAKE 671 (903)
T ss_pred HhhhhCCHHH---HHH--HhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEe-CcccHHHHH
Confidence 2222221111 111 1234679999999999999999999999999999999999999999999999 765555566
Q ss_pred hcccccc--chhcchhheeecchhhHHHHHHHHHHHhhhhHHHHH
Q 003364 780 AADYSIG--KFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICF 822 (826)
Q Consensus 780 ~Ad~v~~--~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~ 822 (826)
+||+|+. ++..+.. .+.+||.+|+|+++++.|.+..|+...+
T Consensus 672 aADiVLldd~f~~Iv~-ai~~gR~i~~nI~k~i~~~ls~n~~~~~ 715 (903)
T PRK15122 672 SADIILLEKSLMVLEE-GVIKGRETFGNIIKYLNMTASSNFGNVF 715 (903)
T ss_pred hcCEEEecCChHHHHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 9999994 5556666 4678999999999999999988865443
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-88 Score=799.11 Aligned_cols=618 Identities=18% Similarity=0.231 Sum_probs=472.8
Q ss_pred CccccccCCCceEEeeccc-ccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHHH
Q 003364 10 DETSQDLYCANRLSNRKYT-LMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDD 88 (826)
Q Consensus 10 ~~~r~~~~g~N~i~~~~~~-~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~ 88 (826)
.++|+++||+|+++.++.+ +| +.++++|++|++++++++++++++.. .+...+.++++++++.+++++++
T Consensus 39 v~~r~~~~G~N~l~~~~~~~~~----~~~~~~~~~p~~~iL~~~a~ls~~~~-----~~~~~~iI~~iv~~~~~i~~~~e 109 (867)
T TIGR01524 39 VTERLAEFGPNQTVEEKKVPNL----RLLIRAFNNPFIYILAMLMGVSYLTD-----DLEATVIIALMVLASGLLGFIQE 109 (867)
T ss_pred HHHHHHhcCCCcCCCCCCCCHH----HHHHHHHhhHHHHHHHHHHHHHHHHh-----hHHHHHHhhhHHHHHHHHHHHHH
Confidence 4679999999999998764 66 88999999999998888888887642 23334445566677888899999
Q ss_pred HHhhhh---hHhhcceEEEEEe------CCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCC
Q 003364 89 YNRYLS---DKKANEKEVWVVK------QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (826)
Q Consensus 89 ~~~~~~---~~~~~~~~~~V~r------~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGE 159 (826)
+++.++ ++++.+.+++|+| ||++++|++++|+|||||.|++||+|||||+|+++++ +.||||+||||
T Consensus 110 ~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES~LTGE 185 (867)
T TIGR01524 110 SRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQSALTGE 185 (867)
T ss_pred HHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEcccccCC
Confidence 987654 5566778999999 9999999999999999999999999999999995443 89999999999
Q ss_pred CCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEE
Q 003364 160 TDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (826)
Q Consensus 160 s~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~ 239 (826)
|.|+.|.+.+.. +.+....+.+|.+|+||.+.+| .+.++|+
T Consensus 186 S~PV~K~~~~~~--------------------------------------~~~~~~~~~~n~vfaGT~v~~G-~~~~~V~ 226 (867)
T TIGR01524 186 SLPVEKFVEDKR--------------------------------------ARDPEILERENLCFMGTNVLSG-HAQAVVL 226 (867)
T ss_pred CCcccccCCccc--------------------------------------cccccccccccceecCCeEEEe-EEEEEEE
Confidence 999999654210 0111123568999999999999 7999999
Q ss_pred EeCCcceeeccCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhh
Q 003364 240 YTGNETKLGMTRGI--PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPL 317 (826)
Q Consensus 240 ~tG~~T~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (826)
+||.+|.+|++.+. ....++++++.+++++.++..++++++++.++++.+. ..+|...+..++
T Consensus 227 ~tG~~T~~gki~~~v~~~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~---------------~~~~~~~~~~al 291 (867)
T TIGR01524 227 ATGSSTWFGSLAIAATERRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLM---------------KGDWLEAFLFAL 291 (867)
T ss_pred EEcCccHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHh---------------cCCHHHHHHHHH
Confidence 99999999986542 2445689999999999988887777666655443211 113334443333
Q ss_pred HHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEE
Q 003364 318 RFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCC 397 (826)
Q Consensus 318 ~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~ 397 (826)
.++..++|++||+++.++...++. +|.+++ +++|++.++|+||++|+||||||||||+|+|+|.+++
T Consensus 292 ---~l~v~~iP~~Lp~~vt~~la~g~~------~mak~~----ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~ 358 (867)
T TIGR01524 292 ---AVAVGLTPEMLPMIVSSNLAKGAI------NMSKKK----VIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHI 358 (867)
T ss_pred ---HHHHHhCcchHHHHHHHHHHHHHH------HHHhCC----cEEccchhhhhccCccEEEecCCCccccCeEEEEEEe
Confidence 345678999998877777666655 555544 8999999999999999999999999999999999874
Q ss_pred EcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEeec
Q 003364 398 IGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKN 477 (826)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~ 477 (826)
.... ....+++...++|+... ...+||.|.|+++++.....
T Consensus 359 ~~~~-----------------------~~~~~~l~~a~l~~~~~----------~~~~~p~~~Al~~~~~~~~~------ 399 (867)
T TIGR01524 359 DSSG-----------------------ETSERVLKMAWLNSYFQ----------TGWKNVLDHAVLAKLDESAA------ 399 (867)
T ss_pred cCCC-----------------------CCHHHHHHHHHHhCCCC----------CCCCChHHHHHHHHHHhhch------
Confidence 2100 00122333333332211 11469999999999875321
Q ss_pred CceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcC-----------CChhHHHHH
Q 003364 478 ASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG-----------QQTRTFVEA 546 (826)
Q Consensus 478 ~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~-----------~~~~~~~~~ 546 (826)
......++.++.+||+|++|+|+++++.. ++.+++++||+||.++++|+.. +.++++.+.
T Consensus 400 --------~~~~~~~~~~~~~pF~s~~k~ms~~v~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~ 470 (867)
T TIGR01524 400 --------RQTASRWKKVDEIPFDFDRRRLSVVVENR-AEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDM 470 (867)
T ss_pred --------hhHhhcCceEEEeccCCCcCEEEEEEEcC-CceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHH
Confidence 01123466778899999999999999864 3467899999999999999631 113467788
Q ss_pred HHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHH
Q 003364 547 VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLR 626 (826)
Q Consensus 547 ~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~ 626 (826)
++.++.+|+||+++|||.++.++.. + ....|.+++|+|+++|+||+|++++++|++|+
T Consensus 471 ~~~~a~~G~rvlavA~~~~~~~~~~-~---------------------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~ 528 (867)
T TIGR01524 471 TAEMNRQGIRVIAVATKTLKVGEAD-F---------------------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALF 528 (867)
T ss_pred HHHHHhcCCEEEEEEEeccCccccc-c---------------------cccccCCcEEEEEEEeeCCCchhHHHHHHHHH
Confidence 8999999999999999998754210 0 01235799999999999999999999999999
Q ss_pred HcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHH
Q 003364 627 KAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIAL 706 (826)
Q Consensus 627 ~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 706 (826)
++||+++|+|||+..+|.++|+++||.... +++|..++...
T Consensus 529 ~aGI~vvmiTGD~~~tA~aIA~~lGI~~~~---------------------------------------v~~g~~l~~~~ 569 (867)
T TIGR01524 529 KNGINVKVLTGDNEIVTARICQEVGIDAND---------------------------------------FLLGADIEELS 569 (867)
T ss_pred HCCCEEEEEcCCCHHHHHHHHHHcCCCCCC---------------------------------------eeecHhhhhCC
Confidence 999999999999999999999999995321 11222222111
Q ss_pred HHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhcccccc
Q 003364 707 KHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIG 786 (826)
Q Consensus 707 ~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~ 786 (826)
++ .+. ....+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||+.||||||| |++.+-++++||+|+.
T Consensus 570 ~~---el~--~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAm-g~gtdvAk~aADiVLl 643 (867)
T TIGR01524 570 DE---ELA--RELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISV-DTAADIAKEASDIILL 643 (867)
T ss_pred HH---HHH--HHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEe-CCccHHHHHhCCEEEe
Confidence 10 011 11234679999999999999999999999999999999999999999999999 7655555669999994
Q ss_pred --chhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHh
Q 003364 787 --KFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFI 823 (826)
Q Consensus 787 --~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~ 823 (826)
++..+.. .+.+||.+|+|+++++.|.+..|+...+.
T Consensus 644 dd~~~~I~~-ai~~gR~i~~ni~k~i~~~ls~n~~~~~~ 681 (867)
T TIGR01524 644 EKSLMVLEE-GVIEGRNTFGNILKYLKMTASSNFGNVFS 681 (867)
T ss_pred cCChHHHHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 4555555 46789999999999999999888765544
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-88 Score=788.76 Aligned_cols=595 Identities=22% Similarity=0.232 Sum_probs=468.3
Q ss_pred CccccccCCCceEEeecccccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHHHH
Q 003364 10 DETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDY 89 (826)
Q Consensus 10 ~~~r~~~~g~N~i~~~~~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 89 (826)
.++|+++||+|+++.+++++| ..|+++|++|+++.++++++++++.. .+.....++++++++..+++++++
T Consensus 7 a~~r~~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~lL~~aa~~s~~~~-----~~~~~~~i~~~~~i~~~i~~~qe~ 77 (755)
T TIGR01647 7 AKKRLAKYGPNELPEKKVSPL----LKFLGFFWNPLSWVMEAAAIIAIALE-----NWVDFVIILGLLLLNATIGFIEEN 77 (755)
T ss_pred HHHHHHhcCCCCCCCCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhhc-----chhhhhhhhhhhHHHHHHHHHHHH
Confidence 467999999999998666666 78999999999988888888887653 222334455566677788999999
Q ss_pred Hhhhh---hHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCce-EEEEcCCCCCCCCceee
Q 003364 90 NRYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGV-CYVETAALDGETDLKTR 165 (826)
Q Consensus 90 ~~~~~---~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~-~~Vdes~lTGEs~p~~K 165 (826)
++.++ ++++.+++++|+|||++++|++++|+|||||.|++||+|||||+|+ +|. +.||||+|||||.|+.|
T Consensus 78 ~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi-----~g~~~~VDeS~LTGES~PV~K 152 (755)
T TIGR01647 78 KAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLF-----EGDYIQVDQAALTGESLPVTK 152 (755)
T ss_pred HHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEE-----ecCceEEEcccccCCccceEe
Confidence 87664 4556788999999999999999999999999999999999999999 554 99999999999999999
Q ss_pred eccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcc
Q 003364 166 LIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNET 245 (826)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T 245 (826)
..+|.+|+||.+.+| .+.++|++||.+|
T Consensus 153 ---------------------------------------------------~~~~~v~aGT~v~~G-~~~~~V~~tG~~T 180 (755)
T TIGR01647 153 ---------------------------------------------------KTGDIAYSGSTVKQG-EAEAVVTATGMNT 180 (755)
T ss_pred ---------------------------------------------------ccCCeeeccCEEEcc-EEEEEEEEcCCcc
Confidence 346789999999999 7999999999999
Q ss_pred eeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhhHHHHH
Q 003364 246 KLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELL 322 (826)
Q Consensus 246 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (826)
.+|++.+ ..+.+++++++.+++++.++.+++++++++.+++++... ..+|...+..++ .+
T Consensus 181 ~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~--------------~~~~~~~~~~~i---~v 243 (755)
T TIGR01647 181 FFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGR--------------GESFREGLQFAL---VL 243 (755)
T ss_pred HHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------------CCCHHHHHHHHH---HH
Confidence 9998644 445567899999999999888877777766655543211 112333333222 35
Q ss_pred hcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCee
Q 003364 323 CSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIF 402 (826)
Q Consensus 323 ~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~ 402 (826)
+..++|++||+++.++...+.. +|.+++ +++|+++++|+||++|++|||||||||+|+|.|.+++..+..
T Consensus 244 lv~a~P~~Lp~~~~~~la~g~~------r~ak~g----ilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~ 313 (755)
T TIGR01647 244 LVGGIPIAMPAVLSVTMAVGAA------ELAKKK----AIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNG 313 (755)
T ss_pred HHHhCCcchHHHHHHHHHHHHH------HHHhCC----eEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCC
Confidence 6678999998877777666665 555544 899999999999999999999999999999999998754210
Q ss_pred ecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEeecCceEE
Q 003364 403 YGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILE 482 (826)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~ 482 (826)
+ +..+++...++|+. ..++||.|.|+++++.+.+.
T Consensus 314 ~----------------------~~~~~l~~a~~~~~------------~~~~~pi~~Ai~~~~~~~~~----------- 348 (755)
T TIGR01647 314 F----------------------DKDDVLLYAALASR------------EEDQDAIDTAVLGSAKDLKE----------- 348 (755)
T ss_pred C----------------------CHHHHHHHHHHhCC------------CCCCChHHHHHHHHHHHhHH-----------
Confidence 0 11233444444432 11479999999998875430
Q ss_pred EEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcC-CChhHHHHHHHHHHHcCCeEEEEE
Q 003364 483 IKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG-QQTRTFVEAVEQYSQLGLRTLCLA 561 (826)
Q Consensus 483 ~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~-~~~~~~~~~~~~~~~~G~rvl~~A 561 (826)
....+++++.+||++.+|+|+++++..++++.++++||+||.++++|+.. ..++++.+.+++++.+|+||+++|
T Consensus 349 -----~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA 423 (755)
T TIGR01647 349 -----ARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVA 423 (755)
T ss_pred -----HHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEE
Confidence 12236677889999999999999987655778889999999999999743 335678888999999999999999
Q ss_pred EEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChh
Q 003364 562 WREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQN 641 (826)
Q Consensus 562 ~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~ 641 (826)
||.. |.+++|+|+++|+||+||+++++|++|+++|++++|+|||+..
T Consensus 424 ~~~~---------------------------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~ 470 (755)
T TIGR01647 424 RTDE---------------------------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLA 470 (755)
T ss_pred EEcC---------------------------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHH
Confidence 9721 3689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHH-HHHHHHHhhhcccc
Q 003364 642 TAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIAL-KHYRKAFTELAILS 720 (826)
Q Consensus 642 ~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~~~~~~~~~~~~~~ 720 (826)
+|.++|+++||...... +... .++...+.+. +++.+. ..
T Consensus 471 tA~~IA~~lGI~~~~~~-------~~~l---------------------------~~~~~~~~~~~~~~~~~------~~ 510 (755)
T TIGR01647 471 IAKETARRLGLGTNIYT-------ADVL---------------------------LKGDNRDDLPSGELGEM------VE 510 (755)
T ss_pred HHHHHHHHcCCCCCCcC-------HHHh---------------------------cCCcchhhCCHHHHHHH------HH
Confidence 99999999999542110 0000 0000000000 001111 22
Q ss_pred ceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccc--hhcchhheeec
Q 003364 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK--FRFLKRLILVH 798 (826)
Q Consensus 721 ~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~--~~~l~~l~l~~ 798 (826)
+..+|+|++|+||.++|+.+|..|+.|+|+|||.||+|+|+.||||||| +++.+-++++||+|+.+ +..+.. .+.+
T Consensus 511 ~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm-~~gtdvAkeaADivLl~d~l~~I~~-ai~~ 588 (755)
T TIGR01647 511 DADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAV-AGATDAARSAADIVLTEPGLSVIVD-AILE 588 (755)
T ss_pred hCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEe-cCCcHHHHHhCCEEEEcCChHHHHH-HHHH
Confidence 3569999999999999999999999999999999999999999999999 77666566699999954 455555 4668
Q ss_pred chhhHHHHHHHHHHHhhhhHHHHH
Q 003364 799 GRYSYNRTAFLSQYSFYKSLLICF 822 (826)
Q Consensus 799 gr~~~~~~~~~~~~~~~~~~~~~~ 822 (826)
||.+|+|+++++.|.+..|+...+
T Consensus 589 gR~~~~ni~k~i~~~~~~n~~~~~ 612 (755)
T TIGR01647 589 SRKIFQRMKSYVIYRIAETIRIVF 612 (755)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHH
Confidence 999999999999999999986544
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-86 Score=723.67 Aligned_cols=704 Identities=20% Similarity=0.260 Sum_probs=507.9
Q ss_pred ccccccCCCceEEeecccccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHHHHH
Q 003364 11 ETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYN 90 (826)
Q Consensus 11 ~~r~~~~g~N~i~~~~~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~ 90 (826)
..|+.-||+|.+..+.++.+ .+++++..+|+.+|..+..++|.. .+++++...++++.+.|.....|+..+
T Consensus 167 ~~r~~iyG~N~i~l~ik~i~----~iLv~EvL~PfYlFQ~fSv~lW~~-----d~Y~~YA~cI~iisv~Si~~sv~e~r~ 237 (1140)
T KOG0208|consen 167 IDRRIIYGRNVISLPIKSIS----QILVKEVLNPFYLFQAFSVALWLA-----DSYYYYAFCIVIISVYSIVLSVYETRK 237 (1140)
T ss_pred HhHHhhcCCceeeeecccHH----HHHHHhccchHHHHHhHHhhhhhc-----ccchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 34889999999999999987 889999999985555444444332 233334445555666677778888777
Q ss_pred hhhhhHhhc--ceEEEEEeCCeEEEEEeecCccccEEEeeC-CCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeeec
Q 003364 91 RYLSDKKAN--EKEVWVVKQGIKKLIQSQDIRVGNIVWLRE-NDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLI 167 (826)
Q Consensus 91 ~~~~~~~~~--~~~~~V~r~g~~~~i~~~~l~~GDII~l~~-G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~~ 167 (826)
..+..+++- ...|+|+|+|.|++|.++|||||||+.+.+ |-..|||++|+ +|+|.||||+|||||+|+.|.|
T Consensus 238 qs~rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li-----~g~civNEsmLTGESVPv~K~~ 312 (1140)
T KOG0208|consen 238 QSIRLRSMVKFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLI-----SGDCIVNESMLTGESVPVTKTP 312 (1140)
T ss_pred HHHHHHHHhcCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEE-----eCcEEeecccccCCcccccccC
Confidence 666666654 457899999999999999999999999998 99999999999 8999999999999999999987
Q ss_pred cccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeec-----CceEEEEEEEeC
Q 003364 168 PAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRN-----TEWACGVAVYTG 242 (826)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~-----g~~~~~~V~~tG 242 (826)
.+.-.+.. + + .........+|++|.||.+.+ |+.+.++|++||
T Consensus 313 l~~~~~~~-------------~--------~-----------~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTG 360 (1140)
T KOG0208|consen 313 LPMGTDSL-------------D--------S-----------ITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTG 360 (1140)
T ss_pred CccccccC-------------c--------C-----------eeechhhcCcceeeccceEEEeecCCCCceEEEEEecc
Confidence 64100000 0 0 001111246789999999866 447899999999
Q ss_pred CcceeeccCC-CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhhHHHH
Q 003364 243 NETKLGMTRG-IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFEL 321 (826)
Q Consensus 243 ~~T~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (826)
.+|..|++.+ ...+|..+++.+-|.+..+.++..+.++.++..+..... .+.+.... .++-+.
T Consensus 361 F~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~-------------~g~~~~~i---iirsLD 424 (1140)
T KOG0208|consen 361 FSTTKGQLVRSILYPKPVNFKFYRDSFKFILFLVIIALIGFIYTAIVLNL-------------LGVPLKTI---IIRSLD 424 (1140)
T ss_pred ccccccHHHHhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHH-------------cCCCHHHH---hhhhhc
Confidence 9999999765 467777777777776654444443333322222211110 11122222 245556
Q ss_pred HhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCe
Q 003364 322 LCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGI 401 (826)
Q Consensus 322 l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~ 401 (826)
+++..+|++||.++++....... ++++++ |.|.++..+...|++|++|||||||||++.+.+-.+..-..
T Consensus 425 liTi~VPPALPAaltvG~~~a~~------RLkkk~----IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~ 494 (1140)
T KOG0208|consen 425 LITIVVPPALPAALTVGIIYAQS------RLKKKG----IFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVER 494 (1140)
T ss_pred EEEEecCCCchhhhhHHHHHHHH------HHHhcC----eEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccc
Confidence 88999999999988887666544 455544 99999999999999999999999999999999988875321
Q ss_pred e-ecCCC-CCcccc--hhhhh-hhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEee
Q 003364 402 F-YGNET-GDALKD--VGLLN-AITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNK 476 (826)
Q Consensus 402 ~-~~~~~-~~~~~~--~~~~~-~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~ 476 (826)
. ..... .....+ ..... ..+........+..+++.||++..... .+ .|||.|.-+.++.. +.++..
T Consensus 495 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g---~l---~GDPLdlkmfe~t~---w~~ee~ 565 (1140)
T KOG0208|consen 495 NVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDG---TL---VGDPLDLKMFESTG---WVYEEA 565 (1140)
T ss_pred cccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeCC---ee---ccCceeeeeeeccc---eEEEec
Confidence 1 00000 000000 00000 011112235678899999999886643 22 57888887777554 334221
Q ss_pred c---C----------ceEEEE---eCCe----EEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhc
Q 003364 477 N---A----------SILEIK---FNGS----VLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA 536 (826)
Q Consensus 477 ~---~----------~~~~~~---~~~~----~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~ 536 (826)
+ + ..+... .++. ...+.+++.+||+|..+||||||+.+.+++..+|+|||||.|...|++
T Consensus 566 ~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p 645 (1140)
T KOG0208|consen 566 DIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP 645 (1140)
T ss_pred cccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc
Confidence 1 0 001110 1111 126999999999999999999999998899999999999999999999
Q ss_pred CCChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCC
Q 003364 537 GQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQD 616 (826)
Q Consensus 537 ~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~ 616 (826)
++.|.++++.++.|+.+|+||||+|+|.++... |.+.. .-.++.+|+||+|+|++.|++++++
T Consensus 646 ~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~---~~~~~--------------~~~Rd~vEs~l~FlGLiVmeNkLK~ 708 (1140)
T KOG0208|consen 646 ETVPADYQEVLKEYTHQGFRVIALASKELETST---LQKAQ--------------KLSRDTVESNLEFLGLIVMENKLKE 708 (1140)
T ss_pred ccCCccHHHHHHHHHhCCeEEEEEecCccCcch---HHHHh--------------hccHhhhhccceeeEEEEeeccccc
Confidence 999999999999999999999999999998762 22111 1234789999999999999999999
Q ss_pred chHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHH-------HHHHH-------HHH
Q 003364 617 GVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCR-------SLERV-------LLT 682 (826)
Q Consensus 617 ~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-------~~~ 682 (826)
.++.+|++|++++|+++|+|||+..||..+|++||++.+.....+...+..+.+.... ..... .+.
T Consensus 709 ~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~ 788 (1140)
T KOG0208|consen 709 ETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDL 788 (1140)
T ss_pred ccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccc
Confidence 9999999999999999999999999999999999999886542222332111111000 00000 000
Q ss_pred c----ccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHH
Q 003364 683 M----RITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVR 758 (826)
Q Consensus 683 ~----~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ 758 (826)
. .........+.+.++|+.+..+.++..+.++.+ ..+..+|||++|.||.++|+.+|+.+..|+|||||.||+.
T Consensus 789 ~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~I--l~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCg 866 (1140)
T KOG0208|consen 789 ASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKI--LLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCG 866 (1140)
T ss_pred cCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHH--HhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhh
Confidence 0 001123456889999999999997777777765 3567899999999999999999999999999999999999
Q ss_pred hHHhCCccEEecCCchHHHHhhcccccc--chhcchhheeecchhhHHHHHHHHHHHhhhhH
Q 003364 759 MIQKADIGVGISGREGLQAARAADYSIG--KFRFLKRLILVHGRYSYNRTAFLSQYSFYKSL 818 (826)
Q Consensus 759 ml~~A~vgIam~gn~~~~~~~~Ad~v~~--~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~ 818 (826)
|||+||+||+++.+ ++.-+|.+... +.+..-. ++.|||+.+--.-..++|+-.+++
T Consensus 867 ALKaAdvGISLSea---EASvAApFTSk~~~I~cVp~-vIrEGRaALVTSf~~FkYMalYs~ 924 (1140)
T KOG0208|consen 867 ALKAADVGISLSEA---EASVAAPFTSKTPSISCVPD-VIREGRAALVTSFACFKYMALYSA 924 (1140)
T ss_pred hhhhcccCcchhhh---hHhhcCccccCCCchhhHhH-HHhhhhhhhhhhHHHHHHHHHHHH
Confidence 99999999999432 35568888775 4455555 577999998877777777655544
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-80 Score=666.29 Aligned_cols=687 Identities=22% Similarity=0.241 Sum_probs=525.5
Q ss_pred eCCCccccccCCCceEEeecccc-cccccHHHHHHhhhHHHHHHHHHHHHhhccCccccC--------cccchhhhhhhh
Q 003364 7 INDDETSQDLYCANRLSNRKYTL-MNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVN--------PASTWGPLIFIF 77 (826)
Q Consensus 7 ~~~~~~r~~~~g~N~i~~~~~~~-~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~--------~~~~~~~l~~i~ 77 (826)
...+-+++.+-|+|.++.|+.+. | ..|.+|++..+.+.+++.++++++.+..... ..+.-+.+..++
T Consensus 61 ~~~A~~~L~rdG~NaL~Ppk~t~~w----ikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv 136 (1019)
T KOG0203|consen 61 SQEAAEKLARDGPNALTPPKTTPEW----IKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVV 136 (1019)
T ss_pred HHHHHhhhccCCCCCCCCCCCChHH----HHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEE
Confidence 33445689999999999998753 4 6688999998888888888887754322111 112224444555
Q ss_pred hhhhhHHHHHHHHhh---hhhHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcC
Q 003364 78 AVSATKEAWDDYNRY---LSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETA 154 (826)
Q Consensus 78 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes 154 (826)
++..+..++++.+.. .+.+.+.|+.|+|+|||+...+.+++|||||++.++-|++||||.+++++.+ |+||+|
T Consensus 137 ~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdns 212 (1019)
T KOG0203|consen 137 IVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNS 212 (1019)
T ss_pred EEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEecc
Confidence 666777788877753 4567788999999999999999999999999999999999999999999988 999999
Q ss_pred CCCCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceE
Q 003364 155 ALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWA 234 (826)
Q Consensus 155 ~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~ 234 (826)
+|||||.|..+.+.. +...+++..|+.|.+|.+.+| .+
T Consensus 213 slTGesEP~~~~~~~-----------------------------------------t~~~~~Et~Ni~f~st~~veG-~~ 250 (1019)
T KOG0203|consen 213 SLTGESEPQTRSPEF-----------------------------------------THENPLETRNIAFFSTNCVEG-TG 250 (1019)
T ss_pred ccccccCCccCCccc-----------------------------------------cccCchhheeeeeeeeEEecc-eE
Confidence 999999999885431 112236789999999999999 79
Q ss_pred EEEEEEeCCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccch
Q 003364 235 CGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYE 311 (826)
Q Consensus 235 ~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (826)
+|+|++||.+|.+|++.. ..+..++++++.++++..++...++++.+.++++..... ..|..
T Consensus 251 ~givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~g---------------y~~l~ 315 (1019)
T KOG0203|consen 251 RGIVIATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILG---------------YEWLR 315 (1019)
T ss_pred EEEEEecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhc---------------chhHH
Confidence 999999999999999866 356788999999999999888888777776665443221 12333
Q ss_pred hhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCccccccee
Q 003364 312 LLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRM 391 (826)
Q Consensus 312 ~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~ 391 (826)
.+++ ++.++...+|.+|++++.....+-++ +|.+++ +++|++.+.|+||..++||+|||||||+|+|
T Consensus 316 avv~---~i~iivAnvPeGL~~tvTv~Ltltak------rMa~Kn----c~vknLeavetlGsts~I~SDktGTlTqnrM 382 (1019)
T KOG0203|consen 316 AVVF---LIGIIVANVPEGLLATVTVCLTLTAK------RMARKN----CLVKNLEAVETLGSTSTICSDKTGTLTQNRM 382 (1019)
T ss_pred Hhhh---hheeEEecCcCCccceehhhHHHHHH------HHhhce----eEEeeeeheeecccceeEeecceeeEEecce
Confidence 3322 33467788999999888877777766 676666 8999999999999999999999999999999
Q ss_pred eEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCcee---eecCCccHHHHHHHHHh
Q 003364 392 IFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAIL---YKAQSQDEEALVHAAAQ 468 (826)
Q Consensus 392 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~---~~~~~~~e~all~~a~~ 468 (826)
+|.++|.++.....+... .+........++....+.++..+||.+.....+++... -..|++.|.||++|+.-
T Consensus 383 tVahlw~d~~i~~~d~~~----~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~ 458 (1019)
T KOG0203|consen 383 TVAHLWFDNQIHEADTTE----DQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIEL 458 (1019)
T ss_pred EEEeeccCCceeeeechh----hhhcccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHH
Confidence 999999988766544321 11111222346778899999999999887655443222 12689999999999975
Q ss_pred CCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecC--CCeEEEEecCchhhhhhhhhc----------
Q 003364 469 LHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCH--SGNISLLSKGADEAILPYAHA---------- 536 (826)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~--~~~~~~~~KGa~e~i~~~~~~---------- 536 (826)
.-.. ....++.++.+...||+|.+|+...+.+..+ +.++.+.+|||||.++++|+.
T Consensus 459 ~~~~------------~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pl 526 (1019)
T KOG0203|consen 459 ILGS------------VMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPL 526 (1019)
T ss_pred hcch------------HHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCc
Confidence 3211 1234567788899999999999988887542 357889999999999999972
Q ss_pred -CCChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccC
Q 003364 537 -GQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQ 615 (826)
Q Consensus 537 -~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~ 615 (826)
.+..+.+.+....+...|-||++||++.++++++++.....- ... ...-.++.|+|++++-||+|
T Consensus 527 d~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~---d~~-----------n~p~~nl~FlGl~s~idPPR 592 (1019)
T KOG0203|consen 527 DEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDT---DDV-----------NFPTDNLRFLGLISMIDPPR 592 (1019)
T ss_pred CHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeec---CCC-----------CCcchhccccchhhccCCCc
Confidence 122356778888899999999999999999887664322110 000 12225899999999999999
Q ss_pred CchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEE
Q 003364 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAF 695 (826)
Q Consensus 616 ~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 695 (826)
..+++|+.+|+.+||+++|+|||++-+|.++|+..||+..... ..++.. .+. ...-.........+.
T Consensus 593 ~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~e---------t~e~~a---~r~-~~~v~~vn~~~a~a~ 659 (1019)
T KOG0203|consen 593 AAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSE---------TVEDIA---KRL-NIPVEQVNSRDAKAA 659 (1019)
T ss_pred ccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCch---------hhhhhH---Hhc-CCcccccCccccceE
Confidence 9999999999999999999999999999999999998654321 111110 000 000011112224677
Q ss_pred EEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchH
Q 003364 696 VVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775 (826)
Q Consensus 696 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~ 775 (826)
++.|.++..+..... +++.......+|+|.+|+||..||+..|+.|..|.++|||.||.||||.||+|||| |-+++
T Consensus 660 VihG~eL~~~~~~ql---d~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAM-GiaGS 735 (1019)
T KOG0203|consen 660 VIHGSELPDMSSEQL---DELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM-GIAGS 735 (1019)
T ss_pred EEecccccccCHHHH---HHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceee-ccccc
Confidence 888887766544332 22333455689999999999999999999999999999999999999999999999 88888
Q ss_pred HHHh-hccccccc--hhcchhheeecchhhHHHHHHHHHHHhhhhHH
Q 003364 776 QAAR-AADYSIGK--FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLL 819 (826)
Q Consensus 776 ~~~~-~Ad~v~~~--~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~ 819 (826)
++.+ +||+++.+ |..+.. ..-+||.+|+|++|.+.|.+..|+-
T Consensus 736 DvsKqAADmILLDDNFASIVt-GVEEGRLiFDNLKKsIAYTLTsNip 781 (1019)
T KOG0203|consen 736 DVSKQAADMILLDDNFASIVT-GVEEGRLIFDNLKKSIAYTLTSNIP 781 (1019)
T ss_pred hHHHhhcceEEecCcchhhee-ecccceehhhhHHHHHHHHHHhcch
Confidence 8877 99999944 344443 4568999999999999999999974
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-75 Score=653.27 Aligned_cols=535 Identities=18% Similarity=0.216 Sum_probs=396.7
Q ss_pred HHHhhhHHHHHHHHHHHHhhccCcccc-----Cc-ccchhhhhhhhhhhhh----HHHHHHHHhhhh---hHhhcce-EE
Q 003364 38 WEQFSRFMNQYFLLIACLQLWSLITPV-----NP-ASTWGPLIFIFAVSAT----KEAWDDYNRYLS---DKKANEK-EV 103 (826)
Q Consensus 38 ~~~~~~~~n~~~l~~~~l~~~~~~~~~-----~~-~~~~~~l~~i~~~~~~----~~~~~~~~~~~~---~~~~~~~-~~ 103 (826)
..+|++|+.+.+++.++++++...... .+ ..+.+.++++++++.+ .|.+.++|..++ ++++.++ ++
T Consensus 27 ~~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a 106 (673)
T PRK14010 27 VYMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKA 106 (673)
T ss_pred HHHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 356688998888888888875432211 11 0111222233333333 344446665444 4555554 67
Q ss_pred E-EEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeeeccccccCCCHhhhccc
Q 003364 104 W-VVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKI 182 (826)
Q Consensus 104 ~-V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~~~~~~~~~~~~~~~~~ 182 (826)
+ |.|||++++|++++|+|||+|.|++||+|||||+++ +|.+.||||+|||||.|+.|.+..
T Consensus 107 ~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vi-----eG~~~VDESaLTGES~PV~K~~g~------------- 168 (673)
T PRK14010 107 RRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVI-----KGLATVDESAITGESAPVIKESGG------------- 168 (673)
T ss_pred EEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEE-----EcceEEecchhcCCCCceeccCCC-------------
Confidence 6 679999999999999999999999999999999999 777999999999999999995320
Q ss_pred eEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcceeeccCC---CCCCccc
Q 003364 183 KGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLT 259 (826)
Q Consensus 183 ~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~ 259 (826)
+. +.+++||.+.+| ++.++|+++|.+|.+|++.+ ..+.+++
T Consensus 169 ----------------------------------d~-~~V~aGT~v~~G-~~~i~Vta~g~~T~lgki~~lve~a~~~kt 212 (673)
T PRK14010 169 ----------------------------------DF-DNVIGGTSVASD-WLEVEITSEPGHSFLDKMIGLVEGATRKKT 212 (673)
T ss_pred ----------------------------------cc-CeeecCceeecc-eEEEEEEEecccCHHHHHHHHHhhccccCC
Confidence 11 349999999999 89999999999999998644 4556778
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhhHHHHHhcccccceehhhHHHHH
Q 003364 260 AVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVK 339 (826)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~l~v~l~~~~ 339 (826)
|+|.....+...+..+.+ +++.++.. +. .| . .+...+.+.+ .++..++|++|+..+++..
T Consensus 213 p~e~~l~~l~~~l~ii~l--~~~~~~~~--~~-------~~----~--~~~~~~~~~v---al~V~~IP~aL~~~~~~~~ 272 (673)
T PRK14010 213 PNEIALFTLLMTLTIIFL--VVILTMYP--LA-------KF----L--NFNLSIAMLI---ALAVCLIPTTIGGLLSAIG 272 (673)
T ss_pred HHHHHHHHHHHHHhHHHH--HHHHHHHH--HH-------hh----c--cHHHHHHHHH---HHHHHhhhhhHHHHHHHHH
Confidence 998766554433222111 11111110 00 00 0 1111111111 2334457998887776665
Q ss_pred HHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCeeecCCCCCcccchhhhhh
Q 003364 340 SLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNA 419 (826)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ 419 (826)
..++. +|.+.+ +++|++.++|+||++|++|||||||||+|++.+..+...+
T Consensus 273 ~~g~~------r~ak~g----vLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~------------------- 323 (673)
T PRK14010 273 IAGMD------RVTQFN----ILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK------------------- 323 (673)
T ss_pred HHHHH------HHhhCC----EEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC-------------------
Confidence 55554 555554 9999999999999999999999999999887776643210
Q ss_pred hccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEeecCceEEEEeCCeEEEEEEEEeec
Q 003364 420 ITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLE 499 (826)
Q Consensus 420 ~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 499 (826)
..+..+++.....|+.. +.||.++|+++++++.++... .......|
T Consensus 324 ----~~~~~~ll~~a~~~~~~-------------s~~P~~~AIv~~a~~~~~~~~-----------------~~~~~~~p 369 (673)
T PRK14010 324 ----SSSFERLVKAAYESSIA-------------DDTPEGRSIVKLAYKQHIDLP-----------------QEVGEYIP 369 (673)
T ss_pred ----CccHHHHHHHHHHhcCC-------------CCChHHHHHHHHHHHcCCCch-----------------hhhcceec
Confidence 01223455556666532 359999999999987664321 00112479
Q ss_pred cCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcC--CChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHH
Q 003364 500 FTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG--QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMF 577 (826)
Q Consensus 500 f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~--~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~ 577 (826)
|++++++|++.++ ++ .+.||+|+.++++|... ..+.++.+..++++++|+|+++++
T Consensus 370 F~~~~k~~gv~~~----g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~---------------- 427 (673)
T PRK14010 370 FTAETRMSGVKFT----TR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVL---------------- 427 (673)
T ss_pred cccccceeEEEEC----CE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEE----------------
Confidence 9999999998752 32 45699999999999742 234567778889999999999987
Q ss_pred HHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCC
Q 003364 578 KEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP 657 (826)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~ 657 (826)
.|++++|+++++|++||+++++|++||++|++++|+|||+..+|.++|+++|+
T Consensus 428 ----------------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI----- 480 (673)
T PRK14010 428 ----------------------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV----- 480 (673)
T ss_pred ----------------------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC-----
Confidence 58899999999999999999999999999999999999999999999999998
Q ss_pred CCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHH
Q 003364 658 KGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLV 737 (826)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv 737 (826)
..++++++|+||.++|
T Consensus 481 ----------------------------------------------------------------~~v~A~~~PedK~~iV 496 (673)
T PRK14010 481 ----------------------------------------------------------------DRFVAECKPEDKINVI 496 (673)
T ss_pred ----------------------------------------------------------------ceEEcCCCHHHHHHHH
Confidence 3478899999999999
Q ss_pred HHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccc--hhcchhheeecchhhHHHHHHHHHHHhh
Q 003364 738 ELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK--FRFLKRLILVHGRYSYNRTAFLSQYSFY 815 (826)
Q Consensus 738 ~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~--~~~l~~l~l~~gr~~~~~~~~~~~~~~~ 815 (826)
+.+|..++.|+|+|||.||+|+|+.||||||| |++.+-++++||+|+.+ +..+.+ .+.+||.+|.|+++++.|++.
T Consensus 497 ~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM-gsGTdvAkeAADiVLldd~ls~Iv~-av~~gR~i~~n~~~~~~f~~~ 574 (673)
T PRK14010 497 REEQAKGHIVAMTGDGTNDAPALAEANVGLAM-NSGTMSAKEAANLIDLDSNPTKLME-VVLIGKQLLMTRGSLTTFSIA 574 (673)
T ss_pred HHHHhCCCEEEEECCChhhHHHHHhCCEEEEe-CCCCHHHHHhCCEEEcCCCHHHHHH-HHHHHHHHHHHHHHHHheeee
Confidence 99999999999999999999999999999999 76666666699999954 445554 456799999999999999999
Q ss_pred hhHHHHHhh
Q 003364 816 KSLLICFIQ 824 (826)
Q Consensus 816 ~~~~~~~~~ 824 (826)
.|+.-.|..
T Consensus 575 ~~~~~~~~i 583 (673)
T PRK14010 575 NDIAKYFAI 583 (673)
T ss_pred ccHHHHHHH
Confidence 998766654
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-74 Score=644.06 Aligned_cols=535 Identities=20% Similarity=0.208 Sum_probs=404.8
Q ss_pred HHHHhhhHHHHHHHHHHHHhhccCcccc------Ccccchhh---hhhhhhhhhhHHHHHHHHhhhh---hHhhcce-EE
Q 003364 37 LWEQFSRFMNQYFLLIACLQLWSLITPV------NPASTWGP---LIFIFAVSATKEAWDDYNRYLS---DKKANEK-EV 103 (826)
Q Consensus 37 l~~~~~~~~n~~~l~~~~l~~~~~~~~~------~~~~~~~~---l~~i~~~~~~~~~~~~~~~~~~---~~~~~~~-~~ 103 (826)
-..||++|+.+.+++.++++++..+... .+...|.. +++.+++..+.+.++++|..++ ++++.+. ++
T Consensus 27 ~~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a 106 (679)
T PRK01122 27 PRVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFA 106 (679)
T ss_pred HHHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeE
Confidence 4467889998888888888876543211 12223322 2223344556677788776654 4555554 79
Q ss_pred EEEeCCe-EEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeeeccccccCCCHhhhccc
Q 003364 104 WVVKQGI-KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKI 182 (826)
Q Consensus 104 ~V~r~g~-~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~~~~~~~~~~~~~~~~~ 182 (826)
+|+|||+ +++|++++|+|||+|.|++||+|||||+++ +|.+.||||+|||||.|+.|.+..
T Consensus 107 ~vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vi-----eG~a~VDESaLTGES~PV~K~~G~------------- 168 (679)
T PRK01122 107 RKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVI-----EGVASVDESAITGESAPVIRESGG------------- 168 (679)
T ss_pred EEEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEE-----EccEEEEcccccCCCCceEeCCCC-------------
Confidence 9999998 999999999999999999999999999999 777999999999999999995431
Q ss_pred eEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcceeeccCC---CCCCccc
Q 003364 183 KGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLT 259 (826)
Q Consensus 183 ~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~ 259 (826)
..+.+++||.+.+| ++.+.|+++|.+|.++++.+ ..+.+++
T Consensus 169 -----------------------------------~~~~V~aGT~v~~G-~~~i~Vta~g~~S~lgki~~lve~a~~~kt 212 (679)
T PRK01122 169 -----------------------------------DFSSVTGGTRVLSD-WIVIRITANPGESFLDRMIALVEGAKRQKT 212 (679)
T ss_pred -----------------------------------ccCeEEeceEEEee-eEEEEEEEecccCHHHHHHHHHHhccccCC
Confidence 11239999999999 89999999999999998643 4556679
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhhHHHHHhcccccceehhhHHHHH
Q 003364 260 AVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVK 339 (826)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~l~v~l~~~~ 339 (826)
|++...+.+...++.+.++++++++.++ ||. ...+ .+.+ .+.++..++|++++..+.+..
T Consensus 213 p~e~al~~l~~~l~~i~l~~~~~~~~~~-----------~~~----g~~~--~l~~---~iallV~aiP~alg~l~~~i~ 272 (679)
T PRK01122 213 PNEIALTILLAGLTIIFLLVVATLPPFA-----------AYS----GGAL--SITV---LVALLVCLIPTTIGGLLSAIG 272 (679)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHH-----------HHh----CchH--HHHH---HHHHHHHcccchhhhHHHHHH
Confidence 9998888776655544443333222221 111 0111 1111 123466789998765555554
Q ss_pred HHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCeeecCCCCCcccchhhhhh
Q 003364 340 SLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNA 419 (826)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ 419 (826)
..++. +|.+.+ +++|++.++|.||++|++|||||||||+|+|++.+++..+.
T Consensus 273 i~g~~------r~ak~g----vLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~------------------ 324 (679)
T PRK01122 273 IAGMD------RVLQAN----VIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG------------------ 324 (679)
T ss_pred HHHHH------HHhcCC----eeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC------------------
Confidence 44444 455544 99999999999999999999999999999999998764211
Q ss_pred hccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHh-CCeEEEeecCceEEEEeCCeEEEEEEEEee
Q 003364 420 ITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQ-LHMVLVNKNASILEIKFNGSVLQYEILETL 498 (826)
Q Consensus 420 ~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 498 (826)
.+..+++.+.+.|+.. ..||..+|+++++++ .+... ....+...+..
T Consensus 325 -----~~~~~ll~~a~~~s~~-------------s~hP~~~AIv~~a~~~~~~~~--------------~~~~~~~~~~~ 372 (679)
T PRK01122 325 -----VTEEELADAAQLSSLA-------------DETPEGRSIVVLAKQRFNLRE--------------RDLQSLHATFV 372 (679)
T ss_pred -----CCHHHHHHHHHHhcCC-------------CCCchHHHHHHHHHhhcCCCc--------------hhhccccceeE
Confidence 0112345555566532 257999999999976 33211 01113456778
Q ss_pred ccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcC--CChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHH
Q 003364 499 EFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG--QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLM 576 (826)
Q Consensus 499 ~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~--~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~ 576 (826)
||++.+++|++.++ + ..|+||++|.+++.|... ..++++++.+++++++|.|++++|
T Consensus 373 pF~s~~~~~gv~~~----g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va--------------- 431 (679)
T PRK01122 373 PFSAQTRMSGVDLD----G--REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVA--------------- 431 (679)
T ss_pred eecCcCceEEEEEC----C--EEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEE---------------
Confidence 99999888887542 3 578999999999999642 235678888999999999999999
Q ss_pred HHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCC
Q 003364 577 FKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE 656 (826)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~ 656 (826)
.|++++|+++++|++||+++++|++||++||+++|+|||++.+|.++|+++|+
T Consensus 432 -----------------------~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI---- 484 (679)
T PRK01122 432 -----------------------EDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV---- 484 (679)
T ss_pred -----------------------ECCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC----
Confidence 47899999999999999999999999999999999999999999999999998
Q ss_pred CCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHH
Q 003364 657 PKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQL 736 (826)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~i 736 (826)
..++++++|+||.++
T Consensus 485 -----------------------------------------------------------------d~v~A~~~PedK~~i 499 (679)
T PRK01122 485 -----------------------------------------------------------------DDFLAEATPEDKLAL 499 (679)
T ss_pred -----------------------------------------------------------------cEEEccCCHHHHHHH
Confidence 347899999999999
Q ss_pred HHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccc--hhcchhheeecchhhHHHHHHHHHHHh
Q 003364 737 VELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK--FRFLKRLILVHGRYSYNRTAFLSQYSF 814 (826)
Q Consensus 737 v~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~--~~~l~~l~l~~gr~~~~~~~~~~~~~~ 814 (826)
|+.+|..++.|+|+|||.||+|+|+.||||||| |++.+-++++||+|+.+ +..+.+ .+.+||...-.--.+..|++
T Consensus 500 V~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM-gsGTdvAkeAADiVLldd~~s~Iv~-av~~GR~~~~tr~~~~~f~~ 577 (679)
T PRK01122 500 IRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM-NSGTQAAKEAGNMVDLDSNPTKLIE-VVEIGKQLLMTRGALTTFSI 577 (679)
T ss_pred HHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe-CCCCHHHHHhCCEEEeCCCHHHHHH-HHHHHHHHHhhhHhhhhhhH
Confidence 999999999999999999999999999999999 76656566699999954 445554 35679988866666677877
Q ss_pred hhhHHH
Q 003364 815 YKSLLI 820 (826)
Q Consensus 815 ~~~~~~ 820 (826)
..-++=
T Consensus 578 ~n~~~~ 583 (679)
T PRK01122 578 ANDVAK 583 (679)
T ss_pred HHHHHH
Confidence 766543
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-74 Score=611.17 Aligned_cols=625 Identities=22% Similarity=0.253 Sum_probs=436.0
Q ss_pred cCCCceEEeecccccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHHHHHhhhhh
Q 003364 16 LYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSD 95 (826)
Q Consensus 16 ~~g~N~i~~~~~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~ 95 (826)
+||.|+...+.+++- .+|.+.-..|+..|..+...+|+.-. .|+++++.+++++.+.+. -.++..+.....
T Consensus 175 ~~G~N~fdi~vPtF~----eLFkE~A~aPfFVFQVFcvgLWCLDe----yWYySlFtLfMli~fE~t-lV~Qrm~~lse~ 245 (1160)
T KOG0209|consen 175 KYGKNKFDIVVPTFS----ELFKEHAVAPFFVFQVFCVGLWCLDE----YWYYSLFTLFMLIAFEAT-LVKQRMRTLSEF 245 (1160)
T ss_pred HhcCCccccCCccHH----HHHHHhccCceeeHhHHhHHHHHhHH----HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 499999999999987 88999999999777777777776422 344455555555554332 233444433334
Q ss_pred Hhh--cceEEEEEeCCeEEEEEeecCccccEEEeeC---CCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeeecccc
Q 003364 96 KKA--NEKEVWVVKQGIKKLIQSQDIRVGNIVWLRE---NDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAA 170 (826)
Q Consensus 96 ~~~--~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~---G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~~~~~ 170 (826)
+.+ .+..+.|+|+++|+.+.+++|.|||+|.+.. ...||||.+|| +|+|.|||+||||||.|..|.+...
T Consensus 246 R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL-----~GsciVnEaMLtGESvPl~KE~Ie~ 320 (1160)
T KOG0209|consen 246 RTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLL-----RGSCIVNEAMLTGESVPLMKESIEL 320 (1160)
T ss_pred HhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEE-----ecceeechhhhcCCCcccccccccc
Confidence 443 4668899999999999999999999999987 56899999999 8999999999999999999976533
Q ss_pred ccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecC------------ceEEEEE
Q 003364 171 CMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNT------------EWACGVA 238 (826)
Q Consensus 171 ~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g------------~~~~~~V 238 (826)
.. ++. .++ ....++...+|.||.+.+- +.+.+.|
T Consensus 321 ~~------------------~d~---~ld-------------~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~V 366 (1160)
T KOG0209|consen 321 RD------------------SDD---ILD-------------IDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYV 366 (1160)
T ss_pred CC------------------hhh---hcc-------------cccccceEEEEcCceEEEecCCccccccCCCCCeEEEE
Confidence 11 000 000 0001344678888887531 2589999
Q ss_pred EEeCCcceeeccCCCC---CCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhh
Q 003364 239 VYTGNETKLGMTRGIP---EPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVI 315 (826)
Q Consensus 239 ~~tG~~T~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (826)
++||.+|..|++.+.. .++-+.- |+=+.++++++++++++. .++.|... ...+..+--.+
T Consensus 367 lrTGFeTSQGkLvRtilf~aervTaN----n~Etf~FILFLlVFAiaA--a~Yvwv~G-----------skd~~RsrYKL 429 (1160)
T KOG0209|consen 367 LRTGFETSQGKLVRTILFSAERVTAN----NRETFIFILFLLVFAIAA--AGYVWVEG-----------SKDPTRSRYKL 429 (1160)
T ss_pred EeccccccCCceeeeEEecceeeeec----cHHHHHHHHHHHHHHHHh--hheEEEec-----------ccCcchhhhhe
Confidence 9999999999987741 2222211 121222333333333332 22333221 11122233334
Q ss_pred hhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEE
Q 003364 316 PLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRR 395 (826)
Q Consensus 316 ~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~ 395 (826)
++-|.++++..+|+.||+-++++....-. .+. +.++.|..|-.+.-+|+||++|||||||||+..|.|.+
T Consensus 430 ~LeC~LIlTSVvPpELPmELSmAVNsSL~------ALa----k~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~G 499 (1160)
T KOG0209|consen 430 FLECTLILTSVVPPELPMELSMAVNSSLI------ALA----KLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEG 499 (1160)
T ss_pred eeeeeEEEeccCCCCCchhhhHHHHHHHH------HHH----HhceeecCccccccCCceeEEEecCCCccccccEEEEe
Confidence 46777788999999999888877544322 111 23478888999999999999999999999999999999
Q ss_pred EEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEe
Q 003364 396 CCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVN 475 (826)
Q Consensus 396 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~ 475 (826)
+.-... +.. .. . ..+.-..+-..+++.||++....++ ..|||.|+|.+++..|. ++.
T Consensus 500 vag~~~----~~~-~~------~---~~s~~p~~t~~vlAscHsLv~le~~------lVGDPlEKA~l~~v~W~---~~k 556 (1160)
T KOG0209|consen 500 VAGLSA----DEG-AL------T---PASKAPNETVLVLASCHSLVLLEDK------LVGDPLEKATLEAVGWN---LEK 556 (1160)
T ss_pred cccccC----Ccc-cc------c---chhhCCchHHHHHHHHHHHHHhcCc------ccCChHHHHHHHhcCcc---ccc
Confidence 753111 000 00 0 0011122456789999998765432 26999999999976542 222
Q ss_pred ecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCC---CeEEEEecCchhhhhhhhhcCCChhHHHHHHHHHHH
Q 003364 476 KNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHS---GNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQ 552 (826)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~---~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~ 552 (826)
.+.. . .-.+.....+|.+++.|+|..|||||++..... -++++.+|||||+|..+.. +.|.+|++...+|++
T Consensus 557 ~~~v-~--p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~--dvP~dY~~iYk~ytR 631 (1160)
T KOG0209|consen 557 KNSV-C--PREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLR--DVPKDYDEIYKRYTR 631 (1160)
T ss_pred Cccc-C--CCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHH--hCchhHHHHHHHHhh
Confidence 2110 0 012233468889999999999999999987532 3789999999999999987 568999999999999
Q ss_pred cCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeE
Q 003364 553 LGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINF 632 (826)
Q Consensus 553 ~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v 632 (826)
+|.||+|++||.+.+--..+ .-+..++.+|+||+|.|++.|..|++++++++|+.|++.+|++
T Consensus 632 ~GsRVLALg~K~l~~~~~~q-----------------~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~v 694 (1160)
T KOG0209|consen 632 QGSRVLALGYKPLGDMMVSQ-----------------VRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRV 694 (1160)
T ss_pred ccceEEEEecccccccchhh-----------------hhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceE
Confidence 99999999999998421111 1123457899999999999999999999999999999999999
Q ss_pred EEEcCCChhHHHHHHHHcCCCCCCC---------CC---cEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcCh
Q 003364 633 WMLTGDKQNTAIQIALSCNFISPEP---------KG---QLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (826)
Q Consensus 633 ~i~TGd~~~~a~~~a~~~gi~~~~~---------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 700 (826)
+|+|||++.||.++|+++||..... ++ .....+|...-..... .....-...+.++++|+
T Consensus 695 vMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~--------~~~~~l~~~~dlcitG~ 766 (1160)
T KOG0209|consen 695 VMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPG--------KKKTLLAETHDLCITGS 766 (1160)
T ss_pred EEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCC--------ccchhhhhhhhhhcchh
Confidence 9999999999999999999865411 11 1111122110000000 00000112355678888
Q ss_pred hHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCC
Q 003364 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (826)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn 772 (826)
.++.+..... . ........+|+|+.|.||..++..++..|..++|||||.||+.+||.||||||+-.|
T Consensus 767 ~l~~l~~~~~--l--~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~ 834 (1160)
T KOG0209|consen 767 ALDHLQATDQ--L--RRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNN 834 (1160)
T ss_pred HHHHHhhhHH--H--HHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcC
Confidence 8887765431 0 122345789999999999999999999999999999999999999999999999433
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-71 Score=620.11 Aligned_cols=539 Identities=20% Similarity=0.222 Sum_probs=401.8
Q ss_pred HHHHhhhHHHHHHHHHHHHhhccCccc-------c--Ccccch--hhhhhhhhhhhhHHHHHHHHhhhhhH---hhcce-
Q 003364 37 LWEQFSRFMNQYFLLIACLQLWSLITP-------V--NPASTW--GPLIFIFAVSATKEAWDDYNRYLSDK---KANEK- 101 (826)
Q Consensus 37 l~~~~~~~~n~~~l~~~~l~~~~~~~~-------~--~~~~~~--~~l~~i~~~~~~~~~~~~~~~~~~~~---~~~~~- 101 (826)
-..||++|..+.+++.++++++..+.+ . .|+... ..+++.+++..+.+.+++++..++.. ++.+.
T Consensus 26 ~~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~ 105 (675)
T TIGR01497 26 PKAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTT 105 (675)
T ss_pred HHHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 346788999888888888887653321 0 122111 11222234456677788887766544 44444
Q ss_pred EEEEEe-CCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeeeccccccCCCHhhhc
Q 003364 102 EVWVVK-QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180 (826)
Q Consensus 102 ~~~V~r-~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~~~~~~~~~~~~~~~ 180 (826)
.++|+| ||++++|++++|+|||+|.|++||+|||||+++ +|.+.||||+|||||.|+.|.+..
T Consensus 106 ~a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vi-----eG~~~VDESaLTGES~PV~K~~g~----------- 169 (675)
T TIGR01497 106 FAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVI-----EGVASVDESAITGESAPVIKESGG----------- 169 (675)
T ss_pred eEEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEE-----EccEEEEcccccCCCCceeecCCC-----------
Confidence 588885 899999999999999999999999999999999 778999999999999999995321
Q ss_pred cceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcceeeccCC---CCCCc
Q 003364 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPK 257 (826)
Q Consensus 181 ~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~ 257 (826)
....+++||.+.+| ++.+.|+++|.+|.++++.+ ..+.+
T Consensus 170 -------------------------------------~~~~V~aGT~v~~G-~~~i~Vt~~g~~S~lgri~~lve~a~~~ 211 (675)
T TIGR01497 170 -------------------------------------DFASVTGGTRILSD-WLVVECTANPGETFLDRMIALVEGAQRR 211 (675)
T ss_pred -------------------------------------CcceeecCcEEEee-EEEEEEEEecccCHHHHHHHHHHhcccC
Confidence 01138999999999 89999999999999998654 45566
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhhHHHHHhcccccceehhhHHH
Q 003364 258 LTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDL 337 (826)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~l~v~l~~ 337 (826)
++|+|...+.+...+.++.++++++++.++ .| ....+ .+.+. +.++..++|+++......
T Consensus 212 ktplq~~l~~l~~~l~~v~li~~~~~~~~~-~~--------------~~~~~--~~~~l---vallV~aiP~aLg~l~~a 271 (675)
T TIGR01497 212 KTPNEIALTILLIALTLVFLLVTATLWPFA-AY--------------GGNAI--SVTVL---VALLVCLIPTTIGGLLSA 271 (675)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh--------------cChhH--HHHHH---HHHHHHhCchhhhhHHHH
Confidence 799998887766554433332222111110 01 00111 11111 224566788865433332
Q ss_pred HHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCeeecCCCCCcccchhhh
Q 003364 338 VKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLL 417 (826)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~ 417 (826)
....++. +|.+.+ +++|++.++|+||++|++|||||||||+|+|++.+++..+.
T Consensus 272 v~iag~~------r~ar~g----vLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~---------------- 325 (675)
T TIGR01497 272 IGIAGMD------RVLGFN----VIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG---------------- 325 (675)
T ss_pred HHHHHHH------HHHHCC----eEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC----------------
Confidence 2222322 444443 89999999999999999999999999999999998864210
Q ss_pred hhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEeecCceEEEEeCCeEEEEEEEEe
Q 003364 418 NAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILET 497 (826)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 497 (826)
.+..+++...+.|+.. ..||.++|+++++++.+.... ...+.....
T Consensus 326 -------~~~~~ll~~aa~~~~~-------------s~hP~a~Aiv~~a~~~~~~~~--------------~~~~~~~~~ 371 (675)
T TIGR01497 326 -------VDEKTLADAAQLASLA-------------DDTPEGKSIVILAKQLGIRED--------------DVQSLHATF 371 (675)
T ss_pred -------CcHHHHHHHHHHhcCC-------------CCCcHHHHHHHHHHHcCCCcc--------------ccccccceE
Confidence 1122455555566532 358999999999987664211 011234567
Q ss_pred eccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcC--CChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHH
Q 003364 498 LEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG--QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSL 575 (826)
Q Consensus 498 ~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~--~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~ 575 (826)
.||++.++++++.+. ++ ..+.||+||.+++.|... ..+.++++.+++++++|.|++++|
T Consensus 372 ~pf~~~~~~sg~~~~---~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va-------------- 432 (675)
T TIGR01497 372 VEFTAQTRMSGINLD---NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVC-------------- 432 (675)
T ss_pred EEEcCCCcEEEEEEe---CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEE--------------
Confidence 899999877776543 23 568999999999988642 235678888999999999999999
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC
Q 003364 576 MFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP 655 (826)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~ 655 (826)
.|.+++|+++++|++||+++++|++|+++|++++|+|||+..+|.++|+++|+
T Consensus 433 ------------------------~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI--- 485 (675)
T TIGR01497 433 ------------------------EDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGV--- 485 (675)
T ss_pred ------------------------ECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC---
Confidence 36789999999999999999999999999999999999999999999999998
Q ss_pred CCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHH
Q 003364 656 EPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQ 735 (826)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~ 735 (826)
..++++++|++|..
T Consensus 486 ------------------------------------------------------------------~~v~a~~~PedK~~ 499 (675)
T TIGR01497 486 ------------------------------------------------------------------DDFIAEATPEDKIA 499 (675)
T ss_pred ------------------------------------------------------------------CEEEcCCCHHHHHH
Confidence 34678999999999
Q ss_pred HHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccc--hhcchhheeecchhhHHHHHHHHHHH
Q 003364 736 LVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK--FRFLKRLILVHGRYSYNRTAFLSQYS 813 (826)
Q Consensus 736 iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~--~~~l~~l~l~~gr~~~~~~~~~~~~~ 813 (826)
+++.+++.++.|+|+|||.||+|||+.||+|||| +++.+.++++||+++.+ +..+.+ .+.+||..+-.-..+..|+
T Consensus 500 ~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm-~~gt~~akeaadivLldd~~s~Iv~-av~~GR~~~~t~~~~~t~~ 577 (675)
T TIGR01497 500 LIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAM-NSGTQAAKEAANMVDLDSDPTKLIE-VVHIGKQLLITRGALTTFS 577 (675)
T ss_pred HHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe-CCCCHHHHHhCCEEECCCCHHHHHH-HHHHHHHHHHHHHHHheee
Confidence 9999999999999999999999999999999999 77777677799999854 444444 3567999999989999999
Q ss_pred hhhhHHHHHh
Q 003364 814 FYKSLLICFI 823 (826)
Q Consensus 814 ~~~~~~~~~~ 823 (826)
+...+.-.|.
T Consensus 578 ~~~~~~~~~~ 587 (675)
T TIGR01497 578 IANDVAKYFA 587 (675)
T ss_pred ecccHHHHHH
Confidence 8887765553
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-68 Score=556.32 Aligned_cols=605 Identities=18% Similarity=0.212 Sum_probs=446.4
Q ss_pred CCCccccccCCCceEEeecccccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccC--cccchhhhhhhhhhhhhHHH
Q 003364 8 NDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVN--PASTWGPLIFIFAVSATKEA 85 (826)
Q Consensus 8 ~~~~~r~~~~g~N~i~~~~~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~--~~~~~~~l~~i~~~~~~~~~ 85 (826)
++-|+|++.||+|++...+.+.+ +.|+.-|..|..|..-.++++...+.-.... .+..+..++..+.++..+.+
T Consensus 40 ~E~~eRlk~fG~NkleEkken~~----lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW~DF~gI~~LLliNsti~F 115 (942)
T KOG0205|consen 40 DEVEERLKIFGPNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDWQDFVGICCLLLINSTISF 115 (942)
T ss_pred HHHHHHHHhhCchhhhhhhhhHH----HHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhheeeeecceeee
Confidence 44578999999999998887765 6678888899988888888877653311111 12233445555667778888
Q ss_pred HHHHHhhh---hhHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCc
Q 003364 86 WDDYNRYL---SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDL 162 (826)
Q Consensus 86 ~~~~~~~~---~~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p 162 (826)
++++++-. ++++--..++.|+|||+|.+++++.||||||+.++.|++||||++|++.+ .+.||+|.|||||.|
T Consensus 116 veE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD----~LkiDQSAlTGESLp 191 (942)
T KOG0205|consen 116 IEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGD----PLKIDQSALTGESLP 191 (942)
T ss_pred eeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecCccceecCC----ccccchhhhcCCccc
Confidence 99988643 45555678899999999999999999999999999999999999999755 399999999999999
Q ss_pred eeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeC
Q 003364 163 KTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTG 242 (826)
Q Consensus 163 ~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG 242 (826)
++|. .++.+|+||.|.+|+ +.++|++||
T Consensus 192 vtKh---------------------------------------------------~gd~vfSgSTcKqGE-~eaVViATg 219 (942)
T KOG0205|consen 192 VTKH---------------------------------------------------PGDEVFSGSTCKQGE-IEAVVIATG 219 (942)
T ss_pred cccC---------------------------------------------------CCCceecccccccce-EEEEEEEec
Confidence 9994 456799999999995 999999999
Q ss_pred CcceeeccCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhhHHH
Q 003364 243 NETKLGMTRGI--PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFE 320 (826)
Q Consensus 243 ~~T~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (826)
.+|..|+-... ......+|++.++.+..++++..++-.++..++.+ |... ..+.... -..+
T Consensus 220 ~~TF~GkAA~LVdst~~~GHFqkVLt~IGn~ci~si~~g~lie~~vmy-----------~~q~----R~~r~~i--~nLl 282 (942)
T KOG0205|consen 220 VHTFFGKAAHLVDSTNQVGHFQKVLTGIGNFCICSIALGMLIEITVMY-----------PIQH----RLYRDGI--DNLL 282 (942)
T ss_pred cceeehhhHHhhcCCCCcccHHHHHHhhhhHHHHHHHHHHHHHHHhhh-----------hhhh----hhhhhhh--hheh
Confidence 99999986542 35677889999998776555444332222222211 1100 0000000 0111
Q ss_pred HHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEE----E
Q 003364 321 LLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRR----C 396 (826)
Q Consensus 321 ~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~----i 396 (826)
+++.--+|+++|..++..-.+++- ++.+ ++..+++..++|+|+.+|++|+|||||||.|++.|.+ +
T Consensus 283 vllIGgiPiamPtVlsvTMAiGs~------rLaq----qgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev 352 (942)
T KOG0205|consen 283 VLLIGGIPIAMPTVLSVTMAIGSH------RLSQ----QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEV 352 (942)
T ss_pred eeeecccccccceeeeehhhHHHH------HHHh----cccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCccee
Confidence 122333666666433333223332 2222 2367899999999999999999999999999999876 2
Q ss_pred EEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEee
Q 003364 397 CIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNK 476 (826)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~ 476 (826)
+..+ .+++...++.|++. . .+..|..|.|++...++-
T Consensus 353 ~v~g----------------------v~~D~~~L~A~rAs----r----------~en~DAID~A~v~~L~dP------- 389 (942)
T KOG0205|consen 353 FVKG----------------------VDKDDVLLTAARAS----R----------KENQDAIDAAIVGMLADP------- 389 (942)
T ss_pred eecC----------------------CChHHHHHHHHHHh----h----------hcChhhHHHHHHHhhcCH-------
Confidence 2211 23333334444433 1 113578899999876541
Q ss_pred cCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhc-CCChhHHHHHHHHHHHcCC
Q 003364 477 NASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA-GQQTRTFVEAVEQYSQLGL 555 (826)
Q Consensus 477 ~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~-~~~~~~~~~~~~~~~~~G~ 555 (826)
...+..|+.++.+||++..||....+.++ +|+.+...|||||.|++.|.. ...++++.+.+++|+++|+
T Consensus 390 ---------Keara~ikevhF~PFnPV~Krta~ty~d~-dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGl 459 (942)
T KOG0205|consen 390 ---------KEARAGIKEVHFLPFNPVDKRTALTYIDP-DGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGL 459 (942)
T ss_pred ---------HHHhhCceEEeeccCCccccceEEEEECC-CCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcc
Confidence 22355688999999999999999999987 788899999999999999985 4568889999999999999
Q ss_pred eEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEE
Q 003364 556 RTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWML 635 (826)
Q Consensus 556 rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~ 635 (826)
|.+++|++..++... +.-.....|+|+.-+-||+|.++.++|++....|+.|-|+
T Consensus 460 RSLgVArq~v~e~~~-------------------------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~Vkmi 514 (942)
T KOG0205|consen 460 RSLAVARQEVPEKTK-------------------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 514 (942)
T ss_pred hhhhhhhhccccccc-------------------------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeee
Confidence 999999988776421 1223568899999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHHcCCCCCCCCCc-EEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHHHHHHHh
Q 003364 636 TGDKQNTAIQIALSCNFISPEPKGQ-LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFT 714 (826)
Q Consensus 636 TGd~~~~a~~~a~~~gi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 714 (826)
|||...-++..++++|+-.+..++. .+..++... +.+....
T Consensus 515 tgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~---------------------------~~~~~v~----------- 556 (942)
T KOG0205|consen 515 TGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGS---------------------------MPGSPVD----------- 556 (942)
T ss_pred cchHHHHHHhhhhhhccccCcCCchhhccCCCCCC---------------------------CCCCcHH-----------
Confidence 9999999999999999866543311 111110000 0000000
Q ss_pred hhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccchhcchhh
Q 003364 715 ELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL 794 (826)
Q Consensus 715 ~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~~~l~~l 794 (826)
..+.+..-|+.+.|++|..+|+.|++.++.+.|.|||.||.|+|+.||+|||+ ..+.+.+..+||+|+.. -.|..+
T Consensus 557 --elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiav-a~atdaar~asdiVlte-pglSvi 632 (942)
T KOG0205|consen 557 --ELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAV-ADATDAARSASDIVLTE-PGLSVI 632 (942)
T ss_pred --HHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceee-ccchhhhcccccEEEcC-CCchhh
Confidence 11233667899999999999999999999999999999999999999999999 77766666699999965 444443
Q ss_pred e--eecchhhHHHHHHHHHHHhhhhHH
Q 003364 795 I--LVHGRYSYNRTAFLSQYSFYKSLL 819 (826)
Q Consensus 795 ~--l~~gr~~~~~~~~~~~~~~~~~~~ 819 (826)
+ +..+|.+|+|++....|.+.-.+-
T Consensus 633 I~avltSraIfqrmknytiyavsitir 659 (942)
T KOG0205|consen 633 ISAVLTSRAIFQRMKNYTIYAVSITIR 659 (942)
T ss_pred HHHHHHHHHHHHHHhhheeeeehhHHH
Confidence 3 568999999999988887665554
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-66 Score=580.05 Aligned_cols=489 Identities=20% Similarity=0.232 Sum_probs=374.4
Q ss_pred hhhhhhhhHHHHHHHHhhh------hhHhhcceEEEEEe-CCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCc
Q 003364 75 FIFAVSATKEAWDDYNRYL------SDKKANEKEVWVVK-QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQG 147 (826)
Q Consensus 75 ~i~~~~~~~~~~~~~~~~~------~~~~~~~~~~~V~r-~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G 147 (826)
+++++..+.++++.+.+.+ .+.++.|+++++++ ||++++||.++|++||+|.|+|||+||+||+++ +|
T Consensus 179 ~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~-----~G 253 (713)
T COG2217 179 MLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVV-----SG 253 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEE-----eC
Confidence 3444445556666665544 24566789998876 556999999999999999999999999999999 89
Q ss_pred eEEEEcCCCCCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecce
Q 003364 148 VCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCY 227 (826)
Q Consensus 148 ~~~Vdes~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~ 227 (826)
+..||||+|||||.|+.| ..++.+++||.
T Consensus 254 ~s~vDeS~iTGEs~PV~k---------------------------------------------------~~Gd~V~aGti 282 (713)
T COG2217 254 SSSVDESMLTGESLPVEK---------------------------------------------------KPGDEVFAGTV 282 (713)
T ss_pred cEEeecchhhCCCCCEec---------------------------------------------------CCCCEEeeeEE
Confidence 999999999999999999 45678999999
Q ss_pred eecCceEEEEEEEeCCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCC
Q 003364 228 LRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYP 304 (826)
Q Consensus 228 v~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 304 (826)
+.+| .....|+++|.+|.++++.+ .++.++++.|+++|+++.+|.+..++++++++++|+++... +|..
T Consensus 283 N~~G-~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~----~~~~--- 354 (713)
T COG2217 283 NLDG-SLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGG----DWET--- 354 (713)
T ss_pred ECCc-cEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC----cHHH---
Confidence 9999 79999999999999998755 57888999999999999999998888888887765443220 0100
Q ss_pred CCCccchhhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCc
Q 003364 305 QEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTG 384 (826)
Q Consensus 305 ~~~~~~~~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTG 384 (826)
.....+.++.+.|||.+..++|.++.+.++.+. ++++++|++.++|.++++|+++|||||
T Consensus 355 --a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA------------------~~GILiK~g~~LE~l~~v~tvvFDKTG 414 (713)
T COG2217 355 --ALYRALAVLVIACPCALGLATPTAILVGIGRAA------------------RRGILIKGGEALERLAKVDTVVFDKTG 414 (713)
T ss_pred --HHHHHHhheeeeCccHHHhHHHHHHHHHHHHHH------------------hCceEEeChHHHHhhccCCEEEEeCCC
Confidence 001222333455666666666665444333332 246999999999999999999999999
Q ss_pred ccccceeeEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHH
Q 003364 385 TLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVH 464 (826)
Q Consensus 385 TLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~ 464 (826)
|||+|+++|.++...+. +..+++...+.- +..+.||..+|+++
T Consensus 415 TLT~G~p~v~~v~~~~~------------------------~e~~~L~laAal-------------E~~S~HPiA~AIv~ 457 (713)
T COG2217 415 TLTEGKPEVTDVVALDG------------------------DEDELLALAAAL-------------EQHSEHPLAKAIVK 457 (713)
T ss_pred CCcCCceEEEEEecCCC------------------------CHHHHHHHHHHH-------------HhcCCChHHHHHHH
Confidence 99999999999875321 111222211111 12368999999999
Q ss_pred HHHhCCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcCCChhHHH
Q 003364 465 AAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFV 544 (826)
Q Consensus 465 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~ 544 (826)
+++..+... .+....+| .+ .|-.+. +| ..+.-|++..+...-.+. +. ..
T Consensus 458 ~a~~~~~~~------------------~~~~~~i~----G~--Gv~~~v--~g--~~v~vG~~~~~~~~~~~~--~~-~~ 506 (713)
T COG2217 458 AAAERGLPD------------------VEDFEEIP----GR--GVEAEV--DG--ERVLVGNARLLGEEGIDL--PL-LS 506 (713)
T ss_pred HHHhcCCCC------------------ccceeeec----cC--cEEEEE--CC--EEEEEcCHHHHhhcCCCc--cc-hh
Confidence 998765210 00011122 11 111111 33 334558887765442111 11 56
Q ss_pred HHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHH
Q 003364 545 EAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIET 624 (826)
Q Consensus 545 ~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~ 624 (826)
.....+..+|..++.++ .|.+++|+++++|++|++++++|++
T Consensus 507 ~~~~~~~~~G~t~v~va--------------------------------------~dg~~~g~i~~~D~~R~~a~~aI~~ 548 (713)
T COG2217 507 ERIEALESEGKTVVFVA--------------------------------------VDGKLVGVIALADELRPDAKEAIAA 548 (713)
T ss_pred hhHHHHHhcCCeEEEEE--------------------------------------ECCEEEEEEEEeCCCChhHHHHHHH
Confidence 67888899999988888 5889999999999999999999999
Q ss_pred HHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHH
Q 003364 625 LRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEI 704 (826)
Q Consensus 625 l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 704 (826)
||+.|+++.|+|||+..+|..+|+++||
T Consensus 549 L~~~Gi~~~mLTGDn~~~A~~iA~~lGI---------------------------------------------------- 576 (713)
T COG2217 549 LKALGIKVVMLTGDNRRTAEAIAKELGI---------------------------------------------------- 576 (713)
T ss_pred HHHCCCeEEEEcCCCHHHHHHHHHHcCh----------------------------------------------------
Confidence 9999999999999999999999999998
Q ss_pred HHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhcccc
Q 003364 705 ALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYS 784 (826)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v 784 (826)
..+++++.|++|.++|+.|+..++.|+|+|||.||+|+|..||||||| |.+.+-++++||++
T Consensus 577 -----------------d~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAm-G~GtDvA~eaADvv 638 (713)
T COG2217 577 -----------------DEVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAM-GSGTDVAIEAADVV 638 (713)
T ss_pred -----------------HhheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEee-cCCcHHHHHhCCEE
Confidence 357789999999999999999999999999999999999999999999 77555555699999
Q ss_pred ccchhcchhh--eeecchhhHHHHHHHHHHHhhhhHHHHHhh
Q 003364 785 IGKFRFLKRL--ILVHGRYSYNRTAFLSQYSFYKSLLICFIQ 824 (826)
Q Consensus 785 ~~~~~~l~~l--~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~ 824 (826)
+.+ +.|..+ .+.-+|.+++++++++.|+|.+|.+++.+.
T Consensus 639 L~~-~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA 679 (713)
T COG2217 639 LMR-DDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLA 679 (713)
T ss_pred Eec-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 966 334333 244699999999999999999999877654
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-64 Score=567.88 Aligned_cols=465 Identities=31% Similarity=0.397 Sum_probs=376.6
Q ss_pred hhhhhHHHHHHHHhhh---hhHh--hcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEE
Q 003364 78 AVSATKEAWDDYNRYL---SDKK--ANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVE 152 (826)
Q Consensus 78 ~~~~~~~~~~~~~~~~---~~~~--~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vd 152 (826)
++..+.+.+++++..+ .+++ +++++++|+|+| +++|++++|+|||+|.+++||+|||||+|+ +|.+.||
T Consensus 7 l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl-----~g~~~vd 80 (499)
T TIGR01494 7 LLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLL-----SGSCFVD 80 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEE-----EccEEEE
Confidence 3444455565555433 2333 788999999999 999999999999999999999999999999 7789999
Q ss_pred cCCCCCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCc
Q 003364 153 TAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTE 232 (826)
Q Consensus 153 es~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~ 232 (826)
||+|||||.|+.|. .++.+++|+.+.+|
T Consensus 81 es~LTGEs~pv~k~---------------------------------------------------~g~~v~~gs~~~~G- 108 (499)
T TIGR01494 81 ESNLTGESVPVLKT---------------------------------------------------AGDAVFAGTYVFNG- 108 (499)
T ss_pred cccccCCCCCeeec---------------------------------------------------cCCccccCcEEecc-
Confidence 99999999999994 24568999999999
Q ss_pred eEEEEEEEeCCcceeeccCC---CCCCccchHHHHHHHHH-HHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCc
Q 003364 233 WACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLT-GAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFP 308 (826)
Q Consensus 233 ~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (826)
.....|..+|.+|..+++.. .....++++++..+++. .++.++.+++++++++.+..+.. ...+
T Consensus 109 ~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~------------~~~~ 176 (499)
T TIGR01494 109 TLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLW------------DPNS 176 (499)
T ss_pred EEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------------cccc
Confidence 78899999999998887533 34444688899999988 66666666666655554322110 0001
Q ss_pred cchhhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCccccc
Q 003364 309 WYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTE 388 (826)
Q Consensus 309 ~~~~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~ 388 (826)
|...+ ..++.++..++|++|+++++++...+.. ++.+. ++++|+++++|+||++|++|||||||||+
T Consensus 177 ~~~~~---~~~~~vl~~~~P~aL~~~~~~~~~~~~~------~~~~~----gilvk~~~~lE~l~~v~~i~fDKTGTLT~ 243 (499)
T TIGR01494 177 IFKIF---LRALILLVIAIPIALPLAVTIALAVGDA------RLAKK----GIVVRSLNALEELGKVDYICSDKTGTLTK 243 (499)
T ss_pred HHHHH---HHHHHHHHHhcCCcHHHHHHHHHHHHHH------HHHHC----CcEEechhhhhhccCCcEEEeeCCCcccc
Confidence 22222 3445577888999999998888887755 44444 48999999999999999999999999999
Q ss_pred ceeeEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHh
Q 003364 389 NRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQ 468 (826)
Q Consensus 389 ~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~ 468 (826)
|+|++.+++..+. ++.++||.|.|+++++++
T Consensus 244 ~~~~v~~~~~~~~-------------------------------------------------~~~s~hp~~~ai~~~~~~ 274 (499)
T TIGR01494 244 NEMSFKKVSVLGG-------------------------------------------------EYLSGHPDERALVKSAKW 274 (499)
T ss_pred CceEEEEEEecCC-------------------------------------------------CcCCCChHHHHHHHHhhh
Confidence 9999999875321 022579999999999864
Q ss_pred CCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcCCChhHHHHHHH
Q 003364 469 LHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVE 548 (826)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~ 548 (826)
.+ +...||++.+++|+++++.. ++ .|+||+++.+.+.|.. +.+...
T Consensus 275 ~~------------------------~~~~~f~~~~~~~~~~~~~~-~~---~~~~G~~~~i~~~~~~------~~~~~~ 320 (499)
T TIGR01494 275 KI------------------------LNVFEFSSVRKRMSVIVRGP-DG---TYVKGAPEFVLSRVKD------LEEKVK 320 (499)
T ss_pred cC------------------------cceeccCCCCceEEEEEecC-Cc---EEEeCCHHHHHHhhHH------HHHHHH
Confidence 21 13569999999999999863 22 3789999999998852 445566
Q ss_pred HHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHc
Q 003364 549 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 628 (826)
Q Consensus 549 ~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~ 628 (826)
++..+|+|++++|+ +.+++|+++++|++|+++.++|+.|+++
T Consensus 321 ~~~~~g~~~~~~a~--------------------------------------~~~~~g~i~l~d~lr~~~~~~i~~l~~~ 362 (499)
T TIGR01494 321 ELAQSGLRVLAVAS--------------------------------------KETLLGLLGLEDPLRDDAKETISELREA 362 (499)
T ss_pred HHHhCCCEEEEEEE--------------------------------------CCeEEEEEEecCCCchhHHHHHHHHHHC
Confidence 78889999999995 3479999999999999999999999999
Q ss_pred CCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHH
Q 003364 629 GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH 708 (826)
Q Consensus 629 Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 708 (826)
|++++|+|||+..++..+|+++|+
T Consensus 363 gi~~~~ltGD~~~~a~~ia~~lgi-------------------------------------------------------- 386 (499)
T TIGR01494 363 GIRVIMLTGDNVLTAKAIAKELGI-------------------------------------------------------- 386 (499)
T ss_pred CCeEEEEcCCCHHHHHHHHHHcCc--------------------------------------------------------
Confidence 999999999999999999999985
Q ss_pred HHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 709 YRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 709 ~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
+++++|++|.++++.++..++.|+|+|||.||++||+.||+|||| + ++.+||+++.+
T Consensus 387 ----------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~-~-----a~~~adivl~~- 443 (499)
T TIGR01494 387 ----------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAM-G-----AKAAADIVLLD- 443 (499)
T ss_pred ----------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCcccc-c-----hHHhCCeEEec-
Confidence 246899999999999999999999999999999999999999999 5 47789999976
Q ss_pred hcchhh--eeecchhhHHHHHHHHHHHhhhhHHHHHhhh
Q 003364 789 RFLKRL--ILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825 (826)
Q Consensus 789 ~~l~~l--~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (826)
+.+..+ ++.+||.+++++++++.|.+++|++.+.+.+
T Consensus 444 ~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~ 482 (499)
T TIGR01494 444 DNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAA 482 (499)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333332 4668999999999999999999998777654
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-63 Score=581.51 Aligned_cols=476 Identities=17% Similarity=0.200 Sum_probs=363.2
Q ss_pred hhhHHHHHHHHhhhh---hHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCC
Q 003364 80 SATKEAWDDYNRYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAAL 156 (826)
Q Consensus 80 ~~~~~~~~~~~~~~~---~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~l 156 (826)
...++.+.+.|..+. +.++.|.+++|+|||++++|++++|+|||+|.|++||+|||||+|+ +|.+.||||+|
T Consensus 219 g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi-----~g~~~vdes~l 293 (741)
T PRK11033 219 GERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLL-----SPFASFDESAL 293 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEE-----ECcEEeecccc
Confidence 334444444444333 4566788999999999999999999999999999999999999999 78899999999
Q ss_pred CCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEE
Q 003364 157 DGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACG 236 (826)
Q Consensus 157 TGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~ 236 (826)
||||.|+.| ..++.+++||.+.+| .+.+
T Consensus 294 TGEs~Pv~k---------------------------------------------------~~Gd~V~aGt~~~~G-~~~i 321 (741)
T PRK11033 294 TGESIPVER---------------------------------------------------ATGEKVPAGATSVDR-LVTL 321 (741)
T ss_pred cCCCCCEec---------------------------------------------------CCCCeeccCCEEcCc-eEEE
Confidence 999999999 356789999999999 7999
Q ss_pred EEEEeCCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhh
Q 003364 237 VAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELL 313 (826)
Q Consensus 237 ~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (826)
.|+++|.+|.++++.+ ..+.+++++++.+++++.++.+++++++++++++|+++.. .+|...+
T Consensus 322 ~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~--------------~~~~~~i 387 (741)
T PRK11033 322 EVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFA--------------APWQEWI 387 (741)
T ss_pred EEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--------------CCHHHHH
Confidence 9999999999998754 4566789999999999999999999888888776533211 1122222
Q ss_pred -----hhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCccccc
Q 003364 314 -----VIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTE 388 (826)
Q Consensus 314 -----~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~ 388 (826)
++.+.|+|.+..++|.+ +..+....++ +++++|++.++|.|+++|++|||||||||+
T Consensus 388 ~~a~svlviacPcaL~latP~a----~~~~l~~aar--------------~gilik~~~alE~l~~v~~v~fDKTGTLT~ 449 (741)
T PRK11033 388 YRGLTLLLIGCPCALVISTPAA----ITSGLAAAAR--------------RGALIKGGAALEQLGRVTTVAFDKTGTLTE 449 (741)
T ss_pred HHHHHHHHHhchhhhhhhhHHH----HHHHHHHHHH--------------CCeEEcCcHHHHHhhCCCEEEEeCCCCCcC
Confidence 22233333333333433 3322222222 359999999999999999999999999999
Q ss_pred ceeeEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHh
Q 003364 389 NRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQ 468 (826)
Q Consensus 389 ~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~ 468 (826)
|+|+|.+++..+.. +..+++...+... ..+.||.++|+++++.+
T Consensus 450 g~~~v~~~~~~~~~-----------------------~~~~~l~~aa~~e-------------~~s~hPia~Ai~~~a~~ 493 (741)
T PRK11033 450 GKPQVTDIHPATGI-----------------------SESELLALAAAVE-------------QGSTHPLAQAIVREAQV 493 (741)
T ss_pred CceEEEEEEecCCC-----------------------CHHHHHHHHHHHh-------------cCCCCHHHHHHHHHHHh
Confidence 99999998642210 0112222221111 12579999999999987
Q ss_pred CCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceE-EEEEecCCCeEEEEecCchhhhhhhhhcCCChhHHHHHH
Q 003364 469 LHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMS-VVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAV 547 (826)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~s-viv~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~ 547 (826)
.+.. +||.++.+.+. .-++..-+|+.+ .-|+|+.+.+. .+.+...+
T Consensus 494 ~~~~-------------------------~~~~~~~~~~~g~Gv~~~~~g~~~--~ig~~~~~~~~------~~~~~~~~ 540 (741)
T PRK11033 494 RGLA-------------------------IPEAESQRALAGSGIEGQVNGERV--LICAPGKLPPL------ADAFAGQI 540 (741)
T ss_pred cCCC-------------------------CCCCcceEEEeeEEEEEEECCEEE--EEecchhhhhc------cHHHHHHH
Confidence 6532 24444444432 112211134332 34888877541 23466677
Q ss_pred HHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHH
Q 003364 548 EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRK 627 (826)
Q Consensus 548 ~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~ 627 (826)
.++..+|+|++++| .|.+++|+++++|++|++++++|++|++
T Consensus 541 ~~~~~~g~~~v~va--------------------------------------~~~~~~g~i~l~d~~r~~a~~~i~~L~~ 582 (741)
T PRK11033 541 NELESAGKTVVLVL--------------------------------------RNDDVLGLIALQDTLRADARQAISELKA 582 (741)
T ss_pred HHHHhCCCEEEEEE--------------------------------------ECCEEEEEEEEecCCchhHHHHHHHHHH
Confidence 88999999999999 4779999999999999999999999999
Q ss_pred cCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHH
Q 003364 628 AGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALK 707 (826)
Q Consensus 628 ~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 707 (826)
.|++++|+|||+..++..+|+++||.
T Consensus 583 ~gi~~~llTGd~~~~a~~ia~~lgi~------------------------------------------------------ 608 (741)
T PRK11033 583 LGIKGVMLTGDNPRAAAAIAGELGID------------------------------------------------------ 608 (741)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHcCCC------------------------------------------------------
Confidence 99999999999999999999999982
Q ss_pred HHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccc
Q 003364 708 HYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (826)
Q Consensus 708 ~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~ 787 (826)
.+++..|++|..+++.++.. +.|+|+|||.||+|||+.||+|||| |++.+.++++||+++..
T Consensus 609 ----------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~-g~~~~~a~~~adivl~~ 670 (741)
T PRK11033 609 ----------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAM-GSGTDVALETADAALTH 670 (741)
T ss_pred ----------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEe-cCCCHHHHHhCCEEEec
Confidence 23457899999999999865 6899999999999999999999999 77777777899999954
Q ss_pred --hhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHhh
Q 003364 788 --FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQ 824 (826)
Q Consensus 788 --~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~ 824 (826)
+..|.. .+..||.+++++++++.|++.+|++++.+.
T Consensus 671 ~~l~~l~~-~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a 708 (741)
T PRK11033 671 NRLRGLAQ-MIELSRATHANIRQNITIALGLKAIFLVTT 708 (741)
T ss_pred CCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344443 456799999999999999999997665543
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-62 Score=555.07 Aligned_cols=496 Identities=18% Similarity=0.199 Sum_probs=375.6
Q ss_pred hhhhhhhhhhhHHHHHHHHhhhh---hHhhcceEEEEEeCC-eEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCc
Q 003364 72 PLIFIFAVSATKEAWDDYNRYLS---DKKANEKEVWVVKQG-IKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQG 147 (826)
Q Consensus 72 ~l~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~V~r~g-~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G 147 (826)
.+++++++...++.+.+++..+. +...++.+++|+|+| ++++|++++|+|||+|.|++||+|||||+|+ +|
T Consensus 23 ~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi-----~g 97 (556)
T TIGR01525 23 LLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVI-----SG 97 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEE-----ec
Confidence 33444445555666666665443 345567899999996 9999999999999999999999999999999 78
Q ss_pred eEEEEcCCCCCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecce
Q 003364 148 VCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCY 227 (826)
Q Consensus 148 ~~~Vdes~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~ 227 (826)
.+.||||+|||||.|+.| ..++.+|+||.
T Consensus 98 ~~~vdes~lTGEs~pv~k---------------------------------------------------~~g~~v~aGt~ 126 (556)
T TIGR01525 98 ESEVDESALTGESMPVEK---------------------------------------------------KEGDEVFAGTI 126 (556)
T ss_pred ceEEeehhccCCCCCEec---------------------------------------------------CCcCEEeeceE
Confidence 899999999999999999 34678999999
Q ss_pred eecCceEEEEEEEeCCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCC
Q 003364 228 LRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYP 304 (826)
Q Consensus 228 v~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 304 (826)
+.+| .+.++|++||.+|++|++.+ ..+.+++++++.+++++.++.+++++++++.+++++....
T Consensus 127 v~~g-~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~------------ 193 (556)
T TIGR01525 127 NGDG-SLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA------------ 193 (556)
T ss_pred ECCc-eEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------------
Confidence 9999 79999999999999998755 3455779999999999999988888887777766432210
Q ss_pred CCCccchhhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCc
Q 003364 305 QEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTG 384 (826)
Q Consensus 305 ~~~~~~~~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTG 384 (826)
. ..+ ..++.++...+|++|+++++++...... ++.++ ++++|+++++|.||++|++||||||
T Consensus 194 ---~--~~~---~~~~~vlv~~~P~al~l~~~~~~~~~~~------~~~~~----gilvk~~~~le~l~~v~~i~fDKTG 255 (556)
T TIGR01525 194 ---L--GAL---YRALAVLVVACPCALGLATPVAILVAIG------VAARR----GILIKGGDALEKLAKVKTVVFDKTG 255 (556)
T ss_pred ---c--hHH---HHHHHHHhhccccchhehhHHHHHHHHH------HHHHC----CceecCchHHHHhhcCCEEEEeCCC
Confidence 0 111 2233355667888888777776666554 33333 4999999999999999999999999
Q ss_pred ccccceeeEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHH
Q 003364 385 TLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVH 464 (826)
Q Consensus 385 TLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~ 464 (826)
|||+|+|+|.+++..+... ....+++...+.+. ..+.||.+.|+++
T Consensus 256 TLT~~~~~v~~~~~~~~~~---------------------~~~~~~l~~a~~~e-------------~~~~hp~~~Ai~~ 301 (556)
T TIGR01525 256 TLTTGKPTVVDVEPLDDAS---------------------ISEEELLALAAALE-------------QSSSHPLARAIVR 301 (556)
T ss_pred CCcCCceEEEEEEecCCCC---------------------ccHHHHHHHHHHHh-------------ccCCChHHHHHHH
Confidence 9999999999987532110 00112222222211 1246999999999
Q ss_pred HHHhCCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcCCChhHHH
Q 003364 465 AAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFV 544 (826)
Q Consensus 465 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~ 544 (826)
++++.+..... . + ....++ .+.+...+ +|. .-+..|+++.+ . .. ......+.
T Consensus 302 ~~~~~~~~~~~--~-------------~-~~~~~~----~~gi~~~~----~g~-~~~~lg~~~~~-~-~~-~~~~~~~~ 353 (556)
T TIGR01525 302 YAKKRGLELPK--Q-------------E-DVEEVP----GKGVEATV----DGQ-EEVRIGNPRLL-E-LA-AEPISASP 353 (556)
T ss_pred HHHhcCCCccc--c-------------c-CeeEec----CCeEEEEE----CCe-eEEEEecHHHH-h-hc-CCCchhhH
Confidence 99876643210 0 0 000111 11222221 221 12334666654 1 11 11222344
Q ss_pred HHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHH
Q 003364 545 EAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIET 624 (826)
Q Consensus 545 ~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~ 624 (826)
+.+..+..+|+|++.+| .|.+++|.+.++|+++|+++++|++
T Consensus 354 ~~~~~~~~~g~~~~~v~--------------------------------------~~~~~~g~i~~~d~~~~g~~e~l~~ 395 (556)
T TIGR01525 354 DLLNEGESQGKTVVFVA--------------------------------------VDGELLGVIALRDQLRPEAKEAIAA 395 (556)
T ss_pred HHHHHHhhCCcEEEEEE--------------------------------------ECCEEEEEEEecccchHhHHHHHHH
Confidence 56777889999999999 5789999999999999999999999
Q ss_pred HHHcC-CeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHH
Q 003364 625 LRKAG-INFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALE 703 (826)
Q Consensus 625 l~~~G-i~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 703 (826)
|+++| ++++|+|||+..++..+++++|+
T Consensus 396 L~~~g~i~v~ivTgd~~~~a~~i~~~lgi--------------------------------------------------- 424 (556)
T TIGR01525 396 LKRAGGIKLVMLTGDNRSAAEAVAAELGI--------------------------------------------------- 424 (556)
T ss_pred HHHcCCCeEEEEeCCCHHHHHHHHHHhCC---------------------------------------------------
Confidence 99999 99999999999999999999998
Q ss_pred HHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccc
Q 003364 704 IALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY 783 (826)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~ 783 (826)
..+|.++.|++|..+++.++..+++|+|+|||.||++|++.||+||+| |++.+.++..||+
T Consensus 425 ------------------~~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~-g~~~~~~~~~Ad~ 485 (556)
T TIGR01525 425 ------------------DEVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAM-GAGSDVAIEAADI 485 (556)
T ss_pred ------------------CeeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEe-CCCCHHHHHhCCE
Confidence 235667789999999999998889999999999999999999999999 7766666779999
Q ss_pred cccc--hhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHhhh
Q 003364 784 SIGK--FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825 (826)
Q Consensus 784 v~~~--~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (826)
++.+ +..+.. ++..||.+++++++++.|++.+|++.+.+.+
T Consensus 486 vi~~~~~~~l~~-~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~ 528 (556)
T TIGR01525 486 VLLNDDLSSLPT-AIDLSRKTRRIIKQNLAWALGYNLVAIPLAA 528 (556)
T ss_pred EEeCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9964 455555 3567999999999999999999998766543
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-62 Score=536.02 Aligned_cols=481 Identities=19% Similarity=0.223 Sum_probs=380.0
Q ss_pred hHhhcceEEEEEeCCe-EEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeeeccccccC
Q 003364 95 DKKANEKEVWVVKQGI-KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMG 173 (826)
Q Consensus 95 ~~~~~~~~~~V~r~g~-~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~~~~~~~~ 173 (826)
+.++.|.++.++.+|+ +++|+.+.|++||+|.+.||++||+||+++ +|++.||||.+|||+.|+.|
T Consensus 372 Lmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv-----~Gss~VDEs~iTGEs~PV~K-------- 438 (951)
T KOG0207|consen 372 LMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVV-----DGSSEVDESLITGESMPVPK-------- 438 (951)
T ss_pred HhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEE-----eCceeechhhccCCceeccc--------
Confidence 5667899999999997 899999999999999999999999999999 89999999999999999999
Q ss_pred CCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcceeeccCC-
Q 003364 174 MDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG- 252 (826)
Q Consensus 174 ~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T~~~~~~~- 252 (826)
..++.+.+||++.+| ..+..++++|.||.++++.+
T Consensus 439 -------------------------------------------k~gs~ViaGsiN~nG-~l~VkaT~~g~dttla~IvkL 474 (951)
T KOG0207|consen 439 -------------------------------------------KKGSTVIAGSINLNG-TLLVKATKVGGDTTLAQIVKL 474 (951)
T ss_pred -------------------------------------------CCCCeeeeeeecCCc-eEEEEEEeccccchHHHHHHH
Confidence 457789999999999 89999999999999998655
Q ss_pred --CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccc--cceeeCCCCCcc--chhhhhhhHHHHHhccc
Q 003364 253 --IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARK--QWYVLYPQEFPW--YELLVIPLRFELLCSIM 326 (826)
Q Consensus 253 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~ 326 (826)
.++..+.|+|+++|+++.+|.++.+++.++++++|.++....... .|.- .-..+ ..+.+..+.|+|.+..+
T Consensus 475 VEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~---~~~~a~~~aisVlviACPCaLgLA 551 (951)
T KOG0207|consen 475 VEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFD---AFSHAFQLAISVLVIACPCALGLA 551 (951)
T ss_pred HHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhH---HHHHHHHhhheEEEEECchhhhcC
Confidence 577889999999999999999999999998888876654421110 1110 00001 12223446677888888
Q ss_pred ccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCeeecCC
Q 003364 327 IPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNE 406 (826)
Q Consensus 327 iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~ 406 (826)
.|.+..+..+.+... |+++|.++++|.+.++++++||||||||+|++.|.++......
T Consensus 552 TPtAvmvatgvgA~n------------------GvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~---- 609 (951)
T KOG0207|consen 552 TPTAVMVATGVGATN------------------GVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP---- 609 (951)
T ss_pred CceEEEEEechhhhc------------------ceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc----
Confidence 888877777766543 4899999999999999999999999999999999998753321
Q ss_pred CCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEeecCceEEEEeC
Q 003364 407 TGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFN 486 (826)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~~~~~ 486 (826)
-+..+++...+.-. -.+.||..+|++++|+...... +
T Consensus 610 ------------------~~~~e~l~~v~a~E-------------s~SeHPig~AIv~yak~~~~~~---~--------- 646 (951)
T KOG0207|consen 610 ------------------ISLKEALALVAAME-------------SGSEHPIGKAIVDYAKEKLVEP---N--------- 646 (951)
T ss_pred ------------------ccHHHHHHHHHHHh-------------cCCcCchHHHHHHHHHhccccc---C---------
Confidence 11122222222111 2257999999999999866110 0
Q ss_pred CeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcCCChhHHHHHHHHHHHcCCeEEEEEEEecC
Q 003364 487 GSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVE 566 (826)
Q Consensus 487 ~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~ 566 (826)
.-.++..-.|..+.....+.+. ++- ..-|.-+.+...-. ..++++++.++.....|..+.++|
T Consensus 647 ----~~~~~~~~~~pg~g~~~~~~~~----~~~--i~iGN~~~~~r~~~--~~~~~i~~~~~~~e~~g~tvv~v~----- 709 (951)
T KOG0207|consen 647 ----PEGVLSFEYFPGEGIYVTVTVD----GNE--VLIGNKEWMSRNGC--SIPDDILDALTESERKGQTVVYVA----- 709 (951)
T ss_pred ----ccccceeecccCCCcccceEEe----eeE--EeechHHHHHhcCC--CCchhHHHhhhhHhhcCceEEEEE-----
Confidence 0111122233333333222221 222 34477666655422 235668889999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHH
Q 003364 567 EDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQI 646 (826)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~ 646 (826)
.|.+++|++.++|++|+++..+|..|++.|++++|+|||+..+|.++
T Consensus 710 ---------------------------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~sv 756 (951)
T KOG0207|consen 710 ---------------------------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSV 756 (951)
T ss_pred ---------------------------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHH
Confidence 68999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEE
Q 003364 647 ALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICC 726 (826)
Q Consensus 647 a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~ 726 (826)
|+++|+ ..+++
T Consensus 757 A~~VGi---------------------------------------------------------------------~~V~a 767 (951)
T KOG0207|consen 757 AQQVGI---------------------------------------------------------------------DNVYA 767 (951)
T ss_pred HHhhCc---------------------------------------------------------------------ceEEe
Confidence 999997 57899
Q ss_pred EeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccchhcchhh-eee-cchhhHH
Q 003364 727 RVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILV-HGRYSYN 804 (826)
Q Consensus 727 ~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~~~l~~l-~l~-~gr~~~~ 804 (826)
++.|++|.+.|+.++..+..|+|+|||.||.|+|..||+|||| |.+.+-+.++||+|+..+ .|..+ ..+ -+|++..
T Consensus 768 ev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIai-g~gs~vAieaADIVLmrn-~L~~v~~ai~LSrkt~~ 845 (951)
T KOG0207|consen 768 EVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAI-GAGSDVAIEAADIVLMRN-DLRDVPFAIDLSRKTVK 845 (951)
T ss_pred ccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceee-ccccHHHHhhCCEEEEcc-chhhhHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999 776655666999999875 44443 233 5999999
Q ss_pred HHHHHHHHHhhhhHHHH
Q 003364 805 RTAFLSQYSFYKSLLIC 821 (826)
Q Consensus 805 ~~~~~~~~~~~~~~~~~ 821 (826)
|++.++.|++.+|++-+
T Consensus 846 rIk~N~~~A~~yn~~~I 862 (951)
T KOG0207|consen 846 RIKLNFVWALIYNLVGI 862 (951)
T ss_pred hHHHHHHHHHHHHHhhh
Confidence 99999999999999843
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-61 Score=544.45 Aligned_cols=475 Identities=19% Similarity=0.238 Sum_probs=366.7
Q ss_pred hhhhhhhhhhhHHHHHHHHhhhh---hHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCce
Q 003364 72 PLIFIFAVSATKEAWDDYNRYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGV 148 (826)
Q Consensus 72 ~l~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~ 148 (826)
.+++++++...++.+++++..+. ++++++++++|+|||++++|++++|+|||+|.+++||+|||||+++ +|.
T Consensus 23 ~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii-----~g~ 97 (536)
T TIGR01512 23 LLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVL-----SGT 97 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEE-----eCc
Confidence 34444555566677777665444 4456789999999999999999999999999999999999999999 788
Q ss_pred EEEEcCCCCCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeeccee
Q 003364 149 CYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYL 228 (826)
Q Consensus 149 ~~Vdes~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v 228 (826)
+.||||+|||||.|+.| ..++.+|+||.+
T Consensus 98 ~~vdes~lTGEs~pv~k---------------------------------------------------~~g~~v~aGt~v 126 (536)
T TIGR01512 98 STVDESALTGESVPVEK---------------------------------------------------APGDEVFAGAIN 126 (536)
T ss_pred EEEEecccCCCCCcEEe---------------------------------------------------CCCCEEEeeeEE
Confidence 99999999999999999 345789999999
Q ss_pred ecCceEEEEEEEeCCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCC
Q 003364 229 RNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQ 305 (826)
Q Consensus 229 ~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 305 (826)
.+| .+.++|++||.+|.+|++.+ ..+.+++++++.+++++.++.+++++++++.+++++++.
T Consensus 127 ~~G-~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 191 (536)
T TIGR01512 127 LDG-VLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK-------------- 191 (536)
T ss_pred CCc-eEEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------
Confidence 999 79999999999999998755 345577899999999999998888877776666543211
Q ss_pred CCccchhhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcc
Q 003364 306 EFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGT 385 (826)
Q Consensus 306 ~~~~~~~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGT 385 (826)
.+...+ ...+.++..++|++|+++..++...+.. ++.++ ++++|+++++|.+|++|++|||||||
T Consensus 192 --~~~~~~---~~~~svlv~~~P~aL~la~~~~~~~~~~------~~~k~----gilik~~~~le~l~~v~~i~fDKTGT 256 (536)
T TIGR01512 192 --RWPFWV---YRALVLLVVASPCALVISAPAAYLSAIS------AAARH----GILIKGGAALEALAKIKTVAFDKTGT 256 (536)
T ss_pred --ccHHHH---HHHHHHHhhcCccccccchHHHHHHHHH------HHHHC----CeEEcCcHHHHhhcCCCEEEECCCCC
Confidence 011111 1223355677888887777666665554 33333 49999999999999999999999999
Q ss_pred cccceeeEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHH
Q 003364 386 LTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHA 465 (826)
Q Consensus 386 LT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~ 465 (826)
||+|+|++.+++.. +++...+.+. ..+.||.++|++++
T Consensus 257 LT~~~~~v~~~~~~-----------------------------~~l~~a~~~e-------------~~~~hp~~~Ai~~~ 294 (536)
T TIGR01512 257 LTTGRPKVVDVVPA-----------------------------EVLRLAAAAE-------------QASSHPLARAIVDY 294 (536)
T ss_pred CcCCceEEEEeeHH-----------------------------HHHHHHHHHh-------------ccCCCcHHHHHHHH
Confidence 99999999987420 1222222211 12579999999999
Q ss_pred HHhCCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcCCChhHHHH
Q 003364 466 AAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVE 545 (826)
Q Consensus 466 a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~ 545 (826)
+.+.+ .+ .....+| .+.+...+ +|.. +..|+++.+....
T Consensus 295 ~~~~~-~~-------------------~~~~~~~----g~gi~~~~----~g~~--~~ig~~~~~~~~~----------- 333 (536)
T TIGR01512 295 ARKRE-NV-------------------ESVEEVP----GEGVRAVV----DGGE--VRIGNPRSLEAAV----------- 333 (536)
T ss_pred HHhcC-CC-------------------cceEEec----CCeEEEEE----CCeE--EEEcCHHHHhhcC-----------
Confidence 97654 00 0001111 11122111 2332 2347776543221
Q ss_pred HHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHH
Q 003364 546 AVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETL 625 (826)
Q Consensus 546 ~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l 625 (826)
...+..+|.+++.++ .|..++|.+.++|+++|+++++|++|
T Consensus 334 -~~~~~~~~~~~~~v~--------------------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L 374 (536)
T TIGR01512 334 -GARPESAGKTIVHVA--------------------------------------RDGTYLGYILLSDEPRPDAAEAIAEL 374 (536)
T ss_pred -CcchhhCCCeEEEEE--------------------------------------ECCEEEEEEEEeccchHHHHHHHHHH
Confidence 014567788887777 68899999999999999999999999
Q ss_pred HHcCC-eEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHH
Q 003364 626 RKAGI-NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEI 704 (826)
Q Consensus 626 ~~~Gi-~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 704 (826)
+++|+ +++|+|||+..++..+++++|+.
T Consensus 375 ~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~--------------------------------------------------- 403 (536)
T TIGR01512 375 KALGIEKVVMLTGDRRAVAERVARELGID--------------------------------------------------- 403 (536)
T ss_pred HHcCCCcEEEEcCCCHHHHHHHHHHcCCh---------------------------------------------------
Confidence 99999 99999999999999999999982
Q ss_pred HHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecC-CchHHHHhhccc
Q 003364 705 ALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG-REGLQAARAADY 783 (826)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g-n~~~~~~~~Ad~ 783 (826)
.+|+++.|++|..+++.++..+++|+|+|||.||++|++.||+||+| | ++.+..+..||+
T Consensus 404 ------------------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~-g~~~~~~~~~~ad~ 464 (536)
T TIGR01512 404 ------------------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAM-GASGSDVAIETADV 464 (536)
T ss_pred ------------------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEe-CCCccHHHHHhCCE
Confidence 23456789999999999999999999999999999999999999999 6 566666779999
Q ss_pred cc--cchhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHhhh
Q 003364 784 SI--GKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825 (826)
Q Consensus 784 v~--~~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (826)
++ +++..+.. .+..||.+++++++++.|++.+|++.+.+.+
T Consensus 465 vl~~~~l~~l~~-~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~ 507 (536)
T TIGR01512 465 VLLNDDLSRLPQ-AIRLARRTRRIVKQNVVIALGIILLLILLAL 507 (536)
T ss_pred EEECCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99 66677766 4678999999999999999999987665543
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-60 Score=534.40 Aligned_cols=456 Identities=20% Similarity=0.236 Sum_probs=347.5
Q ss_pred hHhhcceEEEEEeC-CeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeeeccccccC
Q 003364 95 DKKANEKEVWVVKQ-GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMG 173 (826)
Q Consensus 95 ~~~~~~~~~~V~r~-g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~~~~~~~~ 173 (826)
+.++.|.+++++|+ |++++|++++|+|||+|.|++||+|||||+|+ +|.+.||||+|||||.|+.|
T Consensus 85 L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~-----~g~~~vdes~lTGEs~pv~k-------- 151 (562)
T TIGR01511 85 LAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVI-----EGESEVDESLVTGESLPVPK-------- 151 (562)
T ss_pred HHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEE-----ECceEEehHhhcCCCCcEEc--------
Confidence 45667889999985 66799999999999999999999999999999 78899999999999999999
Q ss_pred CCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcceeeccCC-
Q 003364 174 MDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG- 252 (826)
Q Consensus 174 ~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T~~~~~~~- 252 (826)
..++.+|+||.+.+| .+.+.|+++|.+|.++++.+
T Consensus 152 -------------------------------------------~~gd~V~aGt~~~~g-~~~~~v~~~g~~t~~~~i~~~ 187 (562)
T TIGR01511 152 -------------------------------------------KVGDPVIAGTVNGTG-SLVVRATATGEDTTLAQIVRL 187 (562)
T ss_pred -------------------------------------------CCCCEEEeeeEECCc-eEEEEEEEecCCChHHHHHHH
Confidence 346789999999999 79999999999999998755
Q ss_pred --CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhhHHHHHhcccccce
Q 003364 253 --IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPIS 330 (826)
Q Consensus 253 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~ 330 (826)
..+.+++++++.+++++.++.+++++++++.+++|.. .+ ...+.++..++|++
T Consensus 188 v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~~----------------------~~---~~~~svlvvacPca 242 (562)
T TIGR01511 188 VRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWLF----------------------AL---EFAVTVLIIACPCA 242 (562)
T ss_pred HHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------HH---HHHHHHHHHhccch
Confidence 3556779999999999999988888777766654310 11 11222344455665
Q ss_pred ehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCeeecCCCCCc
Q 003364 331 IKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDA 410 (826)
Q Consensus 331 l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~ 410 (826)
|+++..++...... ++.+ +++++|++.++|.|+++|++|||||||||+|+|++.++...+..
T Consensus 243 L~la~p~a~~~~~~------~aa~----~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~-------- 304 (562)
T TIGR01511 243 LGLATPTVIAVATG------LAAK----NGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR-------- 304 (562)
T ss_pred hhhHHHHHHHHHHH------HHHH----CCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC--------
Confidence 55444444333322 2222 35999999999999999999999999999999999998642210
Q ss_pred ccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEeecCceEEEEeCCeEE
Q 003364 411 LKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVL 490 (826)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~~~~~~~~~ 490 (826)
+ ..+++...+.+. ..+.||.++|+++++++.+...... .
T Consensus 305 -------------~--~~~~l~~aa~~e-------------~~s~HPia~Ai~~~~~~~~~~~~~~-------------~ 343 (562)
T TIGR01511 305 -------------D--RTELLALAAALE-------------AGSEHPLAKAIVSYAKEKGITLVEV-------------S 343 (562)
T ss_pred -------------C--HHHHHHHHHHHh-------------ccCCChHHHHHHHHHHhcCCCcCCC-------------C
Confidence 0 112222221111 1246999999999998766432100 0
Q ss_pred EEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcCCChhHHHHHHHHHHHcCCeEEEEEEEecCHHHH
Q 003364 491 QYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEY 570 (826)
Q Consensus 491 ~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~ 570 (826)
.+ ..+| .+.+...+ ++. -+..|+++.+.+... . +..+..+|.+++.++
T Consensus 344 ~~---~~~~----g~Gi~~~~----~g~--~~~iG~~~~~~~~~~--~--------~~~~~~~g~~~~~~~--------- 391 (562)
T TIGR01511 344 DF---KAIP----GIGVEGTV----EGT--KIQLGNEKLLGENAI--K--------IDGKAEQGSTSVLVA--------- 391 (562)
T ss_pred Ce---EEEC----CceEEEEE----CCE--EEEEECHHHHHhCCC--C--------CChhhhCCCEEEEEE---------
Confidence 01 1111 22222222 232 245688877643211 0 112457899999888
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHc
Q 003364 571 QEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (826)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~ 650 (826)
.|.+++|++.++|+++|+++++|++|++.|++++|+|||+...+..+++++
T Consensus 392 -----------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~l 442 (562)
T TIGR01511 392 -----------------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKEL 442 (562)
T ss_pred -----------------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHc
Confidence 689999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCc
Q 003364 651 NFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP 730 (826)
Q Consensus 651 gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 730 (826)
|+. +++++.|
T Consensus 443 gi~----------------------------------------------------------------------~~~~~~p 452 (562)
T TIGR01511 443 GIN----------------------------------------------------------------------VRAEVLP 452 (562)
T ss_pred CCc----------------------------------------------------------------------EEccCCh
Confidence 971 4456789
Q ss_pred ccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhcccccc--chhcchhheeecchhhHHHHHH
Q 003364 731 SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIG--KFRFLKRLILVHGRYSYNRTAF 808 (826)
Q Consensus 731 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~--~~~~l~~l~l~~gr~~~~~~~~ 808 (826)
++|..+++.++..+++|+|+|||.||++|++.||+||+| |++.+..+..||+++. +...+.. ++..||.+++++++
T Consensus 453 ~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~-g~g~~~a~~~Advvl~~~~l~~l~~-~i~lsr~~~~~i~q 530 (562)
T TIGR01511 453 DDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAI-GAGTDVAIEAADVVLMRNDLNDVAT-AIDLSRKTLRRIKQ 530 (562)
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEe-CCcCHHHHhhCCEEEeCCCHHHHHH-HHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 7666656679999995 4455555 35679999999999
Q ss_pred HHHHHhhhhHHHHHhh
Q 003364 809 LSQYSFYKSLLICFIQ 824 (826)
Q Consensus 809 ~~~~~~~~~~~~~~~~ 824 (826)
++.|++.+|++.+.+.
T Consensus 531 n~~~a~~~n~~~i~la 546 (562)
T TIGR01511 531 NLLWAFGYNVIAIPIA 546 (562)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999876554
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-58 Score=550.91 Aligned_cols=485 Identities=19% Similarity=0.195 Sum_probs=367.8
Q ss_pred hhhhHHHHHHHHhhh------hhHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEE
Q 003364 79 VSATKEAWDDYNRYL------SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVE 152 (826)
Q Consensus 79 ~~~~~~~~~~~~~~~------~~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vd 152 (826)
+..+.++++++-+.+ ++.++.|++++|+|+|++++|+.++|+|||+|.|++||+|||||+|+ +|.+.||
T Consensus 295 ~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~-----~g~~~vd 369 (834)
T PRK10671 295 LINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEIT-----QGEAWLD 369 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEE-----EceEEEe
Confidence 334445555554433 24456788999999999999999999999999999999999999999 7889999
Q ss_pred cCCCCCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCc
Q 003364 153 TAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTE 232 (826)
Q Consensus 153 es~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~ 232 (826)
||+|||||.|+.| ..++.+++||.+.+|
T Consensus 370 eS~lTGEs~pv~k---------------------------------------------------~~gd~V~aGt~~~~G- 397 (834)
T PRK10671 370 EAMLTGEPIPQQK---------------------------------------------------GEGDSVHAGTVVQDG- 397 (834)
T ss_pred ehhhcCCCCCEec---------------------------------------------------CCCCEEEecceecce-
Confidence 9999999999999 356789999999999
Q ss_pred eEEEEEEEeCCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCcc
Q 003364 233 WACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPW 309 (826)
Q Consensus 233 ~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (826)
.+.+.|+++|.+|.++++.+ ..+..++++++.+++++.++.+++++++++.+++|++.. ....|
T Consensus 398 ~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~-------------~~~~~ 464 (834)
T PRK10671 398 SVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFG-------------PAPQI 464 (834)
T ss_pred eEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------------CchHH
Confidence 79999999999999998654 445667899999999999999888888877766643211 00011
Q ss_pred chhhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccc
Q 003364 310 YELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTEN 389 (826)
Q Consensus 310 ~~~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~ 389 (826)
...+..++ .++..++|++|+.+..++...+.. ++.+ +++++|+++++|.||++|++|||||||||+|
T Consensus 465 ~~~~~~a~---~vlv~acPcaL~la~p~a~~~~~~------~~a~----~gilvk~~~~le~l~~v~~v~fDKTGTLT~g 531 (834)
T PRK10671 465 VYTLVIAT---TVLIIACPCALGLATPMSIISGVG------RAAE----FGVLVRDADALQRASTLDTLVFDKTGTLTEG 531 (834)
T ss_pred HHHHHHHH---HHHHHhcccchhhhHHHHHHHHHH------HHHH----CCeEEecHHHHHhhcCCCEEEEcCCCccccC
Confidence 11222122 234456677766555555444433 2222 3599999999999999999999999999999
Q ss_pred eeeEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHH-HhhhceeeecccCCCCceeeecCCccHHHHHHHHHh
Q 003364 390 RMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLT-VMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQ 468 (826)
Q Consensus 390 ~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~ 468 (826)
+|+|.++...+.. + ..+++. +.+++. .+.||.++|+++++..
T Consensus 532 ~~~v~~~~~~~~~---------------------~--~~~~l~~a~~~e~--------------~s~hp~a~Ai~~~~~~ 574 (834)
T PRK10671 532 KPQVVAVKTFNGV---------------------D--EAQALRLAAALEQ--------------GSSHPLARAILDKAGD 574 (834)
T ss_pred ceEEEEEEccCCC---------------------C--HHHHHHHHHHHhC--------------CCCCHHHHHHHHHHhh
Confidence 9999987632210 0 011222 222222 1469999999998864
Q ss_pred CCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcCCChhHHHHHHH
Q 003364 469 LHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVE 548 (826)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~ 548 (826)
.... ...+++.. | .+.+... . +|.. +..|+++.+..... ..+.+...++
T Consensus 575 ~~~~---------------~~~~~~~~---~----g~Gv~~~--~--~g~~--~~~G~~~~~~~~~~---~~~~~~~~~~ 623 (834)
T PRK10671 575 MTLP---------------QVNGFRTL---R----GLGVSGE--A--EGHA--LLLGNQALLNEQQV---DTKALEAEIT 623 (834)
T ss_pred CCCC---------------CcccceEe---c----ceEEEEE--E--CCEE--EEEeCHHHHHHcCC---ChHHHHHHHH
Confidence 3210 00011110 0 0111111 1 3432 45699987754321 2345667778
Q ss_pred HHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHc
Q 003364 549 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 628 (826)
Q Consensus 549 ~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~ 628 (826)
.+..+|.+++.+| .|..++|++++.|+++|+++++|++|++.
T Consensus 624 ~~~~~g~~~v~va--------------------------------------~~~~~~g~~~l~d~~r~~a~~~i~~L~~~ 665 (834)
T PRK10671 624 AQASQGATPVLLA--------------------------------------VDGKAAALLAIRDPLRSDSVAALQRLHKA 665 (834)
T ss_pred HHHhCCCeEEEEE--------------------------------------ECCEEEEEEEccCcchhhHHHHHHHHHHC
Confidence 8889999999999 47789999999999999999999999999
Q ss_pred CCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHH
Q 003364 629 GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH 708 (826)
Q Consensus 629 Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 708 (826)
|++++|+|||+..++..+++++|+
T Consensus 666 gi~v~~~Tgd~~~~a~~ia~~lgi-------------------------------------------------------- 689 (834)
T PRK10671 666 GYRLVMLTGDNPTTANAIAKEAGI-------------------------------------------------------- 689 (834)
T ss_pred CCeEEEEcCCCHHHHHHHHHHcCC--------------------------------------------------------
Confidence 999999999999999999999998
Q ss_pred HHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccc-
Q 003364 709 YRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK- 787 (826)
Q Consensus 709 ~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~- 787 (826)
..+++++.|++|.++++.++..+++|+|+|||.||++|++.||+||+| |++.+.++++||+++..
T Consensus 690 -------------~~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~-g~g~~~a~~~ad~vl~~~ 755 (834)
T PRK10671 690 -------------DEVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAM-GGGSDVAIETAAITLMRH 755 (834)
T ss_pred -------------CEEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEe-cCCCHHHHHhCCEEEecC
Confidence 246677889999999999999999999999999999999999999999 88888888899999854
Q ss_pred -hhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHh
Q 003364 788 -FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFI 823 (826)
Q Consensus 788 -~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~ 823 (826)
+..+.. .+..||..+.++++++.|++.+|++.+.+
T Consensus 756 ~~~~i~~-~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~ 791 (834)
T PRK10671 756 SLMGVAD-ALAISRATLRNMKQNLLGAFIYNSLGIPI 791 (834)
T ss_pred CHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555 35679999999999999999999877654
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-50 Score=410.30 Aligned_cols=461 Identities=22% Similarity=0.251 Sum_probs=333.5
Q ss_pred hhhHHHHHHHHhhhh---hHhhc-ceEEEEEeC-CeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcC
Q 003364 80 SATKEAWDDYNRYLS---DKKAN-EKEVWVVKQ-GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETA 154 (826)
Q Consensus 80 ~~~~~~~~~~~~~~~---~~~~~-~~~~~V~r~-g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes 154 (826)
.-+.+.+.+-|-..+ +++.. ...++++++ |.++.+++.+|+.||+|.++.||.||+||.++ +|.++||||
T Consensus 79 ANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVI-----eG~asVdES 153 (681)
T COG2216 79 ANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVI-----EGVASVDES 153 (681)
T ss_pred HHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEE-----eeeeecchh
Confidence 334555555543222 23222 234566665 89999999999999999999999999999999 899999999
Q ss_pred CCCCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceE
Q 003364 155 ALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWA 234 (826)
Q Consensus 155 ~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~ 234 (826)
.+||||-|+.|.++- .-+.+-.||.+.+. |.
T Consensus 154 AITGESaPViresGg------------------------------------------------D~ssVtGgT~v~SD-~l 184 (681)
T COG2216 154 AITGESAPVIRESGG------------------------------------------------DFSSVTGGTRVLSD-WL 184 (681)
T ss_pred hccCCCcceeeccCC------------------------------------------------CcccccCCcEEeee-eE
Confidence 999999999996541 12337788999876 99
Q ss_pred EEEEEEeCCcceeecc---CCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccch
Q 003364 235 CGVAVYTGNETKLGMT---RGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYE 311 (826)
Q Consensus 235 ~~~V~~tG~~T~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (826)
...+...--+|.+-++ .+.++.+++|-|..+.-+...+.++.++.. ..++.+ . .|. .... ..
T Consensus 185 ~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~---~Tl~p~-a-------~y~---~g~~-~~ 249 (681)
T COG2216 185 KIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLAV---ATLYPF-A-------IYS---GGGA-AS 249 (681)
T ss_pred EEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHHH---HhhhhH-H-------HHc---CCCC-cC
Confidence 9999998888988875 445667778877776654433322222111 111100 0 010 0011 11
Q ss_pred hhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCccccccee
Q 003364 312 LLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRM 391 (826)
Q Consensus 312 ~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~ 391 (826)
. .....++.+++|..+--.++..-..++- ++.+- +++.+++.++|.+|.||+++.|||||+|-|+-
T Consensus 250 i----~~LiALlV~LIPTTIGgLLsAIGIAGMd------Rv~~~----NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR 315 (681)
T COG2216 250 V----TVLVALLVCLIPTTIGGLLSAIGIAGMD------RVTQF----NVIATSGRAVEAAGDVDTLLLDKTGTITLGNR 315 (681)
T ss_pred H----HHHHHHHHHHhcccHHHHHHHhhhhhhh------Hhhhh----ceeecCcchhhhcCCccEEEecccCceeecch
Confidence 1 1112256667887643333322222221 22222 38889999999999999999999999999976
Q ss_pred eEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCe
Q 003364 392 IFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHM 471 (826)
Q Consensus 392 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~ 471 (826)
.-.+++..+ .-+..++..+...+.= .-..|..+++++.|++.++
T Consensus 316 ~A~~f~p~~-----------------------gv~~~~la~aa~lsSl-------------~DeTpEGrSIV~LA~~~~~ 359 (681)
T COG2216 316 QASEFIPVP-----------------------GVSEEELADAAQLASL-------------ADETPEGRSIVELAKKLGI 359 (681)
T ss_pred hhhheecCC-----------------------CCCHHHHHHHHHHhhh-------------ccCCCCcccHHHHHHHhcc
Confidence 555544221 1122334443333321 1257889999999998875
Q ss_pred EEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhc--CCChhHHHHHHHH
Q 003364 472 VLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA--GQQTRTFVEAVEQ 549 (826)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~--~~~~~~~~~~~~~ 549 (826)
....+.. . ......||+.+.+++.+-... + .-+.||+.+.+..+.+. ++.|+.++..+++
T Consensus 360 ~~~~~~~----------~---~~~~fvpFtA~TRmSGvd~~~---~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~ 421 (681)
T COG2216 360 ELREDDL----------Q---SHAEFVPFTAQTRMSGVDLPG---G--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDE 421 (681)
T ss_pred CCCcccc----------c---ccceeeecceecccccccCCC---C--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 4322110 0 023467999888777765432 2 56789999999998873 4468899999999
Q ss_pred HHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcC
Q 003364 550 YSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAG 629 (826)
Q Consensus 550 ~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~G 629 (826)
.++.|-++++++ .|..++|.+.++|-++|+.+|-+.+||+.|
T Consensus 422 vs~~GGTPL~V~--------------------------------------~~~~~~GVI~LkDivK~Gi~ERf~elR~Mg 463 (681)
T COG2216 422 VSRLGGTPLVVV--------------------------------------ENGRILGVIYLKDIVKPGIKERFAELRKMG 463 (681)
T ss_pred HHhcCCCceEEE--------------------------------------ECCEEEEEEEehhhcchhHHHHHHHHHhcC
Confidence 999999999999 689999999999999999999999999999
Q ss_pred CeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHHH
Q 003364 630 INFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHY 709 (826)
Q Consensus 630 i~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 709 (826)
|+.+|+|||++.||..+|++.|++
T Consensus 464 IkTvM~TGDN~~TAa~IA~EAGVD-------------------------------------------------------- 487 (681)
T COG2216 464 IKTVMITGDNPLTAAAIAAEAGVD-------------------------------------------------------- 487 (681)
T ss_pred CeEEEEeCCCHHHHHHHHHHhCch--------------------------------------------------------
Confidence 999999999999999999999982
Q ss_pred HHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccc
Q 003364 710 RKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 785 (826)
Q Consensus 710 ~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~ 785 (826)
...++.+|++|.++++.-|..++-|+|+|||.||+|+|.+||||+|| .++...+|+++++|=
T Consensus 488 -------------dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AM-NsGTqAAkEAaNMVD 549 (681)
T COG2216 488 -------------DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM-NSGTQAAKEAANMVD 549 (681)
T ss_pred -------------hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhh-ccccHHHHHhhcccc
Confidence 23468899999999999999999999999999999999999999999 555555666999986
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-30 Score=261.08 Aligned_cols=222 Identities=24% Similarity=0.398 Sum_probs=171.2
Q ss_pred hhhhhhhhhhHHHHHHHHhhhhhHhh---cceE-EEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCce
Q 003364 73 LIFIFAVSATKEAWDDYNRYLSDKKA---NEKE-VWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGV 148 (826)
Q Consensus 73 l~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~ 148 (826)
++++++++.+++.++++++.+..+++ .+++ ++|+|||+++++++++|+|||||.|++||++||||+|++ +|.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~----~g~ 77 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLE----SGS 77 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE----SSE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCcccee----ccc
Confidence 34566677778899998887776654 3455 999999999999999999999999999999999999994 288
Q ss_pred EEEEcCCCCCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeeccee
Q 003364 149 CYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYL 228 (826)
Q Consensus 149 ~~Vdes~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v 228 (826)
+.||||.+|||+.|+.|.+. +...+|.+++||.+
T Consensus 78 ~~vd~s~ltGes~pv~k~~~----------------------------------------------~~~~~~~i~~Gs~v 111 (230)
T PF00122_consen 78 AYVDESALTGESEPVKKTPL----------------------------------------------PLNPGNIIFAGSIV 111 (230)
T ss_dssp EEEECHHHHSBSSEEEESSS----------------------------------------------CCCTTTEE-TTEEE
T ss_pred cccccccccccccccccccc----------------------------------------------cccccchhhccccc
Confidence 99999999999999999532 22578999999999
Q ss_pred ecCceEEEEEEEeCCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCC
Q 003364 229 RNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQ 305 (826)
Q Consensus 229 ~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 305 (826)
.+| +++++|++||.+|..+++.+ ..+.+++++++.++++..+++++.+++++++++++..+ ..
T Consensus 112 ~~g-~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~ 177 (230)
T PF00122_consen 112 VSG-WGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFN-------------DS 177 (230)
T ss_dssp EEE-EEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTG-------------ST
T ss_pred ccc-ccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceec-------------cc
Confidence 977 89999999999999998655 34556799999999999999888887777766554321 01
Q ss_pred CCccchhhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccc
Q 003364 306 EFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISED 371 (826)
Q Consensus 306 ~~~~~~~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~ 371 (826)
..+|...+ ..++.++..++|++|++++.++...++.+ +.+. ++++|+++++|+
T Consensus 178 ~~~~~~~~---~~~i~~l~~~~P~~l~~~~~~~~~~~~~~------~~~~----~i~v~~~~a~E~ 230 (230)
T PF00122_consen 178 GISFFKSF---LFAISLLIVLIPCALPLALPLSLAIAARR------LAKN----GIIVKNLSALEA 230 (230)
T ss_dssp TCHCCHHH---HHHHHHHHHHS-TTHHHHHHHHHHHHHHH------HHHT----TEEESSTTHHHH
T ss_pred cccccccc---ccccceeeeecccceeehHHHHHHHHHHH------HHHC----CEEEeCcccccC
Confidence 22333333 34445677889999999998888887763 3333 388999998874
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.9e-22 Score=198.85 Aligned_cols=98 Identities=31% Similarity=0.487 Sum_probs=91.9
Q ss_pred cCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHH
Q 003364 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERV 679 (826)
Q Consensus 600 ~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (826)
.++.++|.+.+.|+++++++++|+.|+++|++++|+|||+..++..+++++||.
T Consensus 114 ~~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~-------------------------- 167 (215)
T PF00702_consen 114 VNLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF-------------------------- 167 (215)
T ss_dssp ESHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC--------------------------
T ss_pred ecCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc--------------------------
Confidence 388999999999999999999999999999999999999999999999999981
Q ss_pred HHHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEe--CcccH--HHHHHHhhcCCCeEEEEcCCcc
Q 003364 680 LLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV--TPSQK--AQLVELLKSCDYRTLAIGDGGN 755 (826)
Q Consensus 680 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~p~~K--~~iv~~l~~~~~~v~~iGDg~N 755 (826)
...+++++ +|.+| .++++.|+..+++|+|+|||.|
T Consensus 168 -----------------------------------------~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~n 206 (215)
T PF00702_consen 168 -----------------------------------------DSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVN 206 (215)
T ss_dssp -----------------------------------------SEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGG
T ss_pred -----------------------------------------cccccccccccccchhHHHHHHHHhcCCCEEEEEccCHH
Confidence 14688899 99999 9999999987779999999999
Q ss_pred cHHhHHhCC
Q 003364 756 DVRMIQKAD 764 (826)
Q Consensus 756 D~~ml~~A~ 764 (826)
|++|+++||
T Consensus 207 D~~al~~Ag 215 (215)
T PF00702_consen 207 DAPALKAAG 215 (215)
T ss_dssp HHHHHHHSS
T ss_pred HHHHHHhCc
Confidence 999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.4e-16 Score=160.84 Aligned_cols=182 Identities=24% Similarity=0.304 Sum_probs=118.5
Q ss_pred EEEeecc-ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEecCCCH-------HHHHHH
Q 003364 606 GVTAIED-RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGKTE-------DEVCRS 675 (826)
Q Consensus 606 G~i~~~d-~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~~~~~~-------~~~~~~ 675 (826)
|.+.-.+ ++++.++++|++++++|++++++|||++..+..+.+++++..+ ..+|..+...++.. +.....
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 3333344 3999999999999999999999999999999999999999764 33344443333322 122222
Q ss_pred HHHHHHH--c--ccccC--------C----------------------CC---ceEEEEcChhHHHHHHHHHHHHhh--h
Q 003364 676 LERVLLT--M--RITTS--------E----------------------PK---DVAFVVDGWALEIALKHYRKAFTE--L 716 (826)
Q Consensus 676 ~~~~~~~--~--~~~~~--------~----------------------~~---~~~l~~~g~~~~~~~~~~~~~~~~--~ 716 (826)
....... . ..... . .. ...+...........+...+.+.. .
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 2111111 0 00000 0 00 001111223344444445555442 2
Q ss_pred ccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 717 AILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 717 ~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
........+.++.|. +|+..++.+.+ ..++|++||||.||++||+.||.|||| +|+.+++|+.||+++.++
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam-~Na~~~~k~~A~~vt~~n 248 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAM-GNADEELKELADYVTTSN 248 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeec-cCCCHHHHhhCCcccCCc
Confidence 233334445899998 69987777765 346799999999999999999999999 999999999999888665
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.1e-15 Score=159.70 Aligned_cols=183 Identities=20% Similarity=0.250 Sum_probs=115.3
Q ss_pred CcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC-----CCCCcEEEe--cCCCH----
Q 003364 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP-----EPKGQLLSI--DGKTE---- 669 (826)
Q Consensus 601 ~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~-----~~~~~~~~~--~~~~~---- 669 (826)
|.|++.- ...+++.++++|++++++|++++++|||++..+..+++++++..+ ..+|..+.. +++.+
T Consensus 11 DGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~~~i~~~~ 87 (270)
T PRK10513 11 DGTLLLP---DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADGETVAQTA 87 (270)
T ss_pred CCcCcCC---CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCCCEEEecC
Confidence 5555532 346999999999999999999999999999999999999997542 234444432 23221
Q ss_pred ---HHHHHHHHHHHHHccc------------ccC--------------------------CC-CceEE-EEcC-hhHHHH
Q 003364 670 ---DEVCRSLERVLLTMRI------------TTS--------------------------EP-KDVAF-VVDG-WALEIA 705 (826)
Q Consensus 670 ---~~~~~~~~~~~~~~~~------------~~~--------------------------~~-~~~~l-~~~g-~~~~~~ 705 (826)
+.....++ ....... ... .. ....+ +... ......
T Consensus 88 l~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 166 (270)
T PRK10513 88 LSYDDYLYLEK-LSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEPEILDAA 166 (270)
T ss_pred CCHHHHHHHHH-HHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCHHHHHHH
Confidence 22211111 1110000 000 00 00001 1111 111222
Q ss_pred HHHHHHHHh-hhccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHH
Q 003364 706 LKHYRKAFT-ELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 778 (826)
Q Consensus 706 ~~~~~~~~~-~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~ 778 (826)
.+.+.+.+. .+........+.+++|. +|+..++.+.+ ..++|++||||.||++||+.||+|||| +|+.+++|
T Consensus 167 ~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm-~NA~~~vK 245 (270)
T PRK10513 167 IARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAM-GNAIPSVK 245 (270)
T ss_pred HHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEe-cCccHHHH
Confidence 222222221 22223334457899987 69987777654 467899999999999999999999999 99999999
Q ss_pred hhccccccch
Q 003364 779 RAADYSIGKF 788 (826)
Q Consensus 779 ~~Ad~v~~~~ 788 (826)
+.||+|+.++
T Consensus 246 ~~A~~vt~~n 255 (270)
T PRK10513 246 EVAQFVTKSN 255 (270)
T ss_pred HhcCeeccCC
Confidence 9999999765
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.6e-15 Score=158.19 Aligned_cols=184 Identities=20% Similarity=0.160 Sum_probs=114.9
Q ss_pred CcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEE-ecCCCHH-------
Q 003364 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLS-IDGKTED------- 670 (826)
Q Consensus 601 ~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~-~~~~~~~------- 670 (826)
|.|++.- ...+++.++++|++++++|++++++|||++..+..+++.+|+..+ ..+|.++. .++..+.
T Consensus 10 DGTLl~~---~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~ 86 (266)
T PRK10976 10 DGTLLSP---DHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRD 86 (266)
T ss_pred CCCCcCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHH
Confidence 5555521 335899999999999999999999999999999999999998654 23444443 2333221
Q ss_pred HHHHHHHHHHH--Hcc--cccC--------------------------------CCCceEEEE-cC--hhHHHHHHHHHH
Q 003364 671 EVCRSLERVLL--TMR--ITTS--------------------------------EPKDVAFVV-DG--WALEIALKHYRK 711 (826)
Q Consensus 671 ~~~~~~~~~~~--~~~--~~~~--------------------------------~~~~~~l~~-~g--~~~~~~~~~~~~ 711 (826)
.....+..... ... .... ......+.+ .. ...+.+.+.+.+
T Consensus 87 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~ 166 (266)
T PRK10976 87 IASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLEQAINA 166 (266)
T ss_pred HHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHHHHHHH
Confidence 11111111100 000 0000 000001111 11 122222223333
Q ss_pred HHh-hhccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhcc--
Q 003364 712 AFT-ELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAAD-- 782 (826)
Q Consensus 712 ~~~-~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad-- 782 (826)
.+. .+........+.+++|. +|+..++.+.+ ..++|++||||.||++||+.||+|||| +|+.+++|+.||
T Consensus 167 ~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm-~NA~~~vK~~A~~~ 245 (266)
T PRK10976 167 RWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIM-GNAHQRLKDLLPEL 245 (266)
T ss_pred HhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeee-cCCcHHHHHhCCCC
Confidence 332 12222333457899997 59987777654 467899999999999999999999999 999999999987
Q ss_pred ccccch
Q 003364 783 YSIGKF 788 (826)
Q Consensus 783 ~v~~~~ 788 (826)
+|+.++
T Consensus 246 ~v~~~n 251 (266)
T PRK10976 246 EVIGSN 251 (266)
T ss_pred eecccC
Confidence 777655
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.8e-15 Score=154.89 Aligned_cols=184 Identities=18% Similarity=0.165 Sum_probs=115.5
Q ss_pred CcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEE-ecCCC-------HH
Q 003364 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLS-IDGKT-------ED 670 (826)
Q Consensus 601 ~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~-~~~~~-------~~ 670 (826)
|.|++. -...+.+.++++|++|+++|++++++|||+...+..+++++|+..+ ..+|..+. .++.. .+
T Consensus 10 DGTLl~---~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~ 86 (272)
T PRK15126 10 DGTLLM---PDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPAD 86 (272)
T ss_pred CCcCcC---CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHH
Confidence 555553 1346999999999999999999999999999999999999998644 23444443 22221 12
Q ss_pred HHHHHHHHHHHH-c--ccc--------c------------------------CCCCceEEEE--cChhHHHHHHHHHHHH
Q 003364 671 EVCRSLERVLLT-M--RIT--------T------------------------SEPKDVAFVV--DGWALEIALKHYRKAF 713 (826)
Q Consensus 671 ~~~~~~~~~~~~-~--~~~--------~------------------------~~~~~~~l~~--~g~~~~~~~~~~~~~~ 713 (826)
.....+...... . ... . .......+.+ .....+.+.+.+.+.+
T Consensus 87 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~ 166 (272)
T PRK15126 87 VAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEAL 166 (272)
T ss_pred HHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHh
Confidence 222211111100 0 000 0 0000011111 1122223333333333
Q ss_pred h-hhccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccc--c
Q 003364 714 T-ELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY--S 784 (826)
Q Consensus 714 ~-~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~--v 784 (826)
. .+........+.+++|. +|+..++.+.+ ..++|++||||.||++||+.||+|||| +|+.+++|+.||+ +
T Consensus 167 ~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm-~Na~~~vK~~A~~~~v 245 (272)
T PRK15126 167 GERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIM-GNAMPQLRAELPHLPV 245 (272)
T ss_pred cCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceec-cCChHHHHHhCCCCee
Confidence 2 22222233457899998 59988877754 457899999999999999999999999 9999999999987 6
Q ss_pred ccch
Q 003364 785 IGKF 788 (826)
Q Consensus 785 ~~~~ 788 (826)
+.++
T Consensus 246 ~~~n 249 (272)
T PRK15126 246 IGHC 249 (272)
T ss_pred cCCC
Confidence 6554
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.2e-14 Score=144.18 Aligned_cols=173 Identities=22% Similarity=0.269 Sum_probs=108.8
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEec--CCC-----HHHHHHHHHHHHHHc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSID--GKT-----EDEVCRSLERVLLTM 683 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~ 683 (826)
.+++.+.++|++++++|++++++|||+...+..+++.+|+..+ ..+|..+... +.. .......+.......
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 4889999999999999999999999999999999999998644 2344444322 211 111111122111111
Q ss_pred c-----cccCC--CCceEEE-EcChhHHHHHHHHHHHHh-hhccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEE
Q 003364 684 R-----ITTSE--PKDVAFV-VDGWALEIALKHYRKAFT-ELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTL 748 (826)
Q Consensus 684 ~-----~~~~~--~~~~~l~-~~g~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~ 748 (826)
. ..... .....+. ......+...+.+ +.+. ...... ...+.++.|. +|+..++.+.+ ..++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~-~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i 177 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELL-EELGLDLEIVD-SGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVA 177 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHH-HHcCCcEEEEe-cceEEEEeeCCCChHHHHHHHHHHhCCCHHHEE
Confidence 0 00000 0011111 1222222222222 2221 111112 2345688887 49877776654 467899
Q ss_pred EEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 749 AIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 749 ~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
+|||+.||++|++.||+|+|| +|+.+++|+.||+|+.++
T Consensus 178 ~~GD~~NDi~m~~~ag~~vam-~Na~~~vk~~a~~v~~~n 216 (230)
T PRK01158 178 AIGDSENDLEMFEVAGFGVAV-ANADEELKEAADYVTEKS 216 (230)
T ss_pred EECCchhhHHHHHhcCceEEe-cCccHHHHHhcceEecCC
Confidence 999999999999999999999 999999999999999765
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.8e-14 Score=120.16 Aligned_cols=127 Identities=23% Similarity=0.342 Sum_probs=109.8
Q ss_pred CcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHH
Q 003364 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVL 680 (826)
Q Consensus 601 ~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (826)
-+.+.+.++---++-+++.++|++|++. ++++++|||.+.+....|+-.|+..
T Consensus 18 ~~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~-------------------------- 70 (152)
T COG4087 18 AGKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPV-------------------------- 70 (152)
T ss_pred cceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCce--------------------------
Confidence 4567888888899999999999999999 9999999999999999999999721
Q ss_pred HHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhH
Q 003364 681 LTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMI 760 (826)
Q Consensus 681 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml 760 (826)
..+++...|..|..+++.|+..++.|+|+|||.||.+||
T Consensus 71 -----------------------------------------~rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laL 109 (152)
T COG4087 71 -----------------------------------------ERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILAL 109 (152)
T ss_pred -----------------------------------------eeeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHh
Confidence 457778889999999999999999999999999999999
Q ss_pred HhCCccEEecC--CchHHHHhhccccccchhcchhhe
Q 003364 761 QKADIGVGISG--REGLQAARAADYSIGKFRFLKRLI 795 (826)
Q Consensus 761 ~~A~vgIam~g--n~~~~~~~~Ad~v~~~~~~l~~l~ 795 (826)
+.||+||..-+ +..+.+..+||+++.+...+..++
T Consensus 110 r~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~ 146 (152)
T COG4087 110 READLGICTIQQEGVPERLLLTADVVLKEIAEILDLL 146 (152)
T ss_pred hhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHh
Confidence 99999997644 445556679999998776665543
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.54 E-value=2e-14 Score=161.14 Aligned_cols=185 Identities=17% Similarity=0.214 Sum_probs=114.6
Q ss_pred cCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCC-----------CCCcEEE-ecCC
Q 003364 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE-----------PKGQLLS-IDGK 667 (826)
Q Consensus 600 ~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~-----------~~~~~~~-~~~~ 667 (826)
-|.|++.- ...+.+.+++||++++++|++++++|||++..+..+++++++.... .+|.++. .+++
T Consensus 315 LDGTLLn~---d~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~NGA~I~d~~g~ 391 (580)
T PLN02887 315 MDGTLLNS---KSQISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFLQGLLVYGRQGR 391 (580)
T ss_pred CCCCCCCC---CCccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEeecCeEEEECCCc
Confidence 36666631 3469999999999999999999999999999999999998864321 1333332 1222
Q ss_pred C-------HHHHHHHHHHHHH-Hcc--cc-c----------------------C------------CCCceEEEEcChh-
Q 003364 668 T-------EDEVCRSLERVLL-TMR--IT-T----------------------S------------EPKDVAFVVDGWA- 701 (826)
Q Consensus 668 ~-------~~~~~~~~~~~~~-~~~--~~-~----------------------~------------~~~~~~l~~~g~~- 701 (826)
. .+.....+....+ .+. .. . . ......+.+.+..
T Consensus 392 ~I~~~~L~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~i~Ki~~~~~~e 471 (580)
T PLN02887 392 EIYRSNLDQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQLLAAADIQKVIFLDTAE 471 (580)
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHHhhcccCeeEEEEEcChH
Confidence 1 1222211111100 000 00 0 0 0000011111111
Q ss_pred --HHHHHHHHHHHHh-hhccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCC
Q 003364 702 --LEIALKHYRKAFT-ELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (826)
Q Consensus 702 --~~~~~~~~~~~~~-~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn 772 (826)
.+.+.+.+.+.+. .+........+.+++|. +|+..++.|.+ ..++|++||||.||++||+.||+|||| +|
T Consensus 472 ~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAM-gN 550 (580)
T PLN02887 472 GVSSVLRPYWSEATGDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVAL-SN 550 (580)
T ss_pred HHHHHHHHHHHHHhcCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEe-CC
Confidence 1111222222221 22333334457899998 59987777765 357899999999999999999999999 99
Q ss_pred chHHHHhhccccccch
Q 003364 773 EGLQAARAADYSIGKF 788 (826)
Q Consensus 773 ~~~~~~~~Ad~v~~~~ 788 (826)
+.+++|+.||+|+.++
T Consensus 551 A~eeVK~~Ad~VT~sN 566 (580)
T PLN02887 551 GAEKTKAVADVIGVSN 566 (580)
T ss_pred CCHHHHHhCCEEeCCC
Confidence 9999999999999765
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.53 E-value=9.4e-14 Score=144.02 Aligned_cols=178 Identities=20% Similarity=0.283 Sum_probs=119.9
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEE--------EecCCCHHHHHHHHHHHH
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLL--------SIDGKTEDEVCRSLERVL 680 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~--------~~~~~~~~~~~~~~~~~~ 680 (826)
...+++.++++|++++++|++++++|||++..+..+..++++..+ ..+|.++ ....-..+.....++...
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 346889999999999999999999999999999999999998633 2233333 222222222322222222
Q ss_pred HHc-ccc-----------c---------------------------CCCCceEEEEcChhHHHHHHHHHHHHhhh-cccc
Q 003364 681 LTM-RIT-----------T---------------------------SEPKDVAFVVDGWALEIALKHYRKAFTEL-AILS 720 (826)
Q Consensus 681 ~~~-~~~-----------~---------------------------~~~~~~~l~~~g~~~~~~~~~~~~~~~~~-~~~~ 720 (826)
..- ... . ....+..+..+......+.+.+.+.+... ....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 210 000 0 00011222222334455556666666543 4444
Q ss_pred ceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccchh
Q 003364 721 RTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (826)
Q Consensus 721 ~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~~ 789 (826)
....+.+++|. +|+..++.+.+ ..+++++|||+.||++||+.||.|||| +|+.+++++.|++++.+.+
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am-~na~~~~k~~a~~i~~~~~ 246 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM-GNATPELKKAADYITPSNN 246 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE-TTS-HHHHHHSSEEESSGT
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE-cCCCHHHHHhCCEEecCCC
Confidence 55677888887 69987777765 467999999999999999999999999 9999999999999996654
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.5e-13 Score=137.99 Aligned_cols=174 Identities=17% Similarity=0.208 Sum_probs=106.4
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEecCC--C-----HHH--HHHHHHHHH-
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGK--T-----EDE--VCRSLERVL- 680 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~~~~--~-----~~~--~~~~~~~~~- 680 (826)
.+.+.++++|++++++|++++++|||++..+..+++.+|+..+ ..+|..+...+. . ... .........
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 5889999999999999999999999999999999999995433 123333332221 0 000 000001000
Q ss_pred --HHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcC
Q 003364 681 --LTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGD 752 (826)
Q Consensus 681 --~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGD 752 (826)
...............+......+.. ....+.+...........+.++.|. +|+..++.+.+ ..+++++|||
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD 173 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTV-REIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGD 173 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHH-HHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECC
Confidence 0000000001111112222122221 2222222211111122346788876 69877776654 4578999999
Q ss_pred CcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 753 GGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 753 g~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
+.||++|++.||+|+|| +|+.+++|+.||+|+.++
T Consensus 174 ~~NDi~m~~~ag~~vam-~Na~~~~k~~A~~vt~~~ 208 (225)
T TIGR01482 174 SENDIDLFEVPGFGVAV-ANAQPELKEWADYVTESP 208 (225)
T ss_pred CHhhHHHHHhcCceEEc-CChhHHHHHhcCeecCCC
Confidence 99999999999999999 999999999999999654
|
catalyze the same reaction as SPP. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.6e-13 Score=141.16 Aligned_cols=183 Identities=18% Similarity=0.154 Sum_probs=109.6
Q ss_pred CcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEe--cCCC-------H
Q 003364 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSI--DGKT-------E 669 (826)
Q Consensus 601 ~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~--~~~~-------~ 669 (826)
|.|++. =...+.+.++++|++++++|++++++|||++..+..+++++++..+ ..+|.++.- +++. .
T Consensus 11 DGTLl~---~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~~~l~~~~l~~ 87 (272)
T PRK10530 11 DGTLLT---PKKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAKKVLEADPLPV 87 (272)
T ss_pred CCceEC---CCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCCEEEEecCCCH
Confidence 555552 1235899999999999999999999999999999999999998653 233443331 2221 1
Q ss_pred HHHHHHHHHHHHH-ccc--c-------cC-----------------------------------CCCceEEEEcChh---
Q 003364 670 DEVCRSLERVLLT-MRI--T-------TS-----------------------------------EPKDVAFVVDGWA--- 701 (826)
Q Consensus 670 ~~~~~~~~~~~~~-~~~--~-------~~-----------------------------------~~~~~~l~~~g~~--- 701 (826)
+.....++...+. +.. . .. ......+......
T Consensus 88 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 167 (272)
T PRK10530 88 QQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAIWKFALTHEDLPQ 167 (272)
T ss_pred HHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcCCcEEEEEecCCHHH
Confidence 2222211111110 000 0 00 0000111111111
Q ss_pred HHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchH
Q 003364 702 LEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775 (826)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~ 775 (826)
.....+.+.+.+. +........+.++.|. +|+..++.+.+ ..+++++|||+.||++|++.||+|||| ||+.+
T Consensus 168 ~~~~~~~~~~~~~-~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vam-gna~~ 245 (272)
T PRK10530 168 LQHFAKHVEHELG-LECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAM-GNADD 245 (272)
T ss_pred HHHHHHHHhhhcC-ceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEe-cCchH
Confidence 1111222222221 1111111234677776 59876665543 457899999999999999999999999 89999
Q ss_pred HHHhhccccccch
Q 003364 776 QAARAADYSIGKF 788 (826)
Q Consensus 776 ~~~~~Ad~v~~~~ 788 (826)
++|+.||+++.++
T Consensus 246 ~lk~~Ad~v~~~n 258 (272)
T PRK10530 246 AVKARADLVIGDN 258 (272)
T ss_pred HHHHhCCEEEecC
Confidence 9999999999765
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.6e-13 Score=135.44 Aligned_cols=173 Identities=17% Similarity=0.193 Sum_probs=109.8
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEecCCCHH-------HHHHHHHHHHHH
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGKTED-------EVCRSLERVLLT 682 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 682 (826)
.++.+.+.++|++|+++|++++++|||++..+..+++.+++..+ ..+|.++...+.... ............
T Consensus 17 ~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (215)
T TIGR01487 17 RMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFP 96 (215)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhh
Confidence 35999999999999999999999999999999999999998644 234444433221110 000000000000
Q ss_pred ccccc-CC-CCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCc
Q 003364 683 MRITT-SE-PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGG 754 (826)
Q Consensus 683 ~~~~~-~~-~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ 754 (826)
..... .. .....+.......+...+.... ..+.... ...+.+++|. +|+..++.+.. ..+++++|||+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~-~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ 173 (215)
T TIGR01487 97 RDRLSNEYPRASLVIMREGKDVDEVREIIKE--RGLNLVD-SGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSE 173 (215)
T ss_pred hhhcccccceeEEEEecCCccHHHHHHHHHh--CCeEEEe-cCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCH
Confidence 00000 01 1112222333333333332222 1122222 1345677776 69988877755 356799999999
Q ss_pred ccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 755 NDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 755 ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
||++|++.|++|+|| +|+.+++|+.||+++.++
T Consensus 174 ND~~ml~~ag~~vam-~na~~~~k~~A~~v~~~~ 206 (215)
T TIGR01487 174 NDIDLFRVVGFKVAV-ANADDQLKEIADYVTSNP 206 (215)
T ss_pred HHHHHHHhCCCeEEc-CCccHHHHHhCCEEcCCC
Confidence 999999999999999 999999999999999654
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.5e-13 Score=139.64 Aligned_cols=180 Identities=16% Similarity=0.173 Sum_probs=106.5
Q ss_pred CcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCC-C--CCCCcEEEecC-----------
Q 003364 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS-P--EPKGQLLSIDG----------- 666 (826)
Q Consensus 601 ~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~-~--~~~~~~~~~~~----------- 666 (826)
|.|++. =...+.+.++++|++|+++|++++++|||+...+..+++++|+.. + ..+|..+....
T Consensus 15 DGTLL~---~~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~ 91 (271)
T PRK03669 15 DGTLLD---SHTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRI 91 (271)
T ss_pred ccCCcC---CCCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEe
Confidence 555543 133567889999999999999999999999999999999999852 2 23444443321
Q ss_pred ---CCHHHHHHHHHHHHHHccc--------------------------ccCCCCceEEEEcCh--hHHHHHHHHHHHHhh
Q 003364 667 ---KTEDEVCRSLERVLLTMRI--------------------------TTSEPKDVAFVVDGW--ALEIALKHYRKAFTE 715 (826)
Q Consensus 667 ---~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~l~~~g~--~~~~~~~~~~~~~~~ 715 (826)
...+.....+....+.... .........+..... .+..+.+.+.+. .
T Consensus 92 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~ 169 (271)
T PRK03669 92 ISGISHGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAEL--G 169 (271)
T ss_pred ecCCCHHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHC--C
Confidence 1122222222211111000 000000111222221 112222222211 2
Q ss_pred hccccceeEEEEeCcc--cHHHHHHHhh----c---CCCeEEEEcCCcccHHhHHhCCccEEecCCch-HH-----HHhh
Q 003364 716 LAILSRTAICCRVTPS--QKAQLVELLK----S---CDYRTLAIGDGGNDVRMIQKADIGVGISGREG-LQ-----AARA 780 (826)
Q Consensus 716 ~~~~~~~~i~~~~~p~--~K~~iv~~l~----~---~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~-~~-----~~~~ 780 (826)
+.... ...+.+++|. +|+..++.+. . ..++|++||||.||++||+.||+|||| ||+. +. .+..
T Consensus 170 ~~~~~-~~~~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM-~~~~~~~~~l~~~~~~ 247 (271)
T PRK03669 170 LQFVQ-GARFWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVV-KGLNREGVHLQDDDPA 247 (271)
T ss_pred CEEEe-cCeeEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEe-cCCCCCCcccccccCC
Confidence 22222 2246799986 6987665554 4 568899999999999999999999999 7554 22 3347
Q ss_pred ccccccc
Q 003364 781 ADYSIGK 787 (826)
Q Consensus 781 Ad~v~~~ 787 (826)
||+++..
T Consensus 248 ~~~~~~~ 254 (271)
T PRK03669 248 RVYRTQR 254 (271)
T ss_pred ceEeccC
Confidence 8888855
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.45 E-value=7.4e-14 Score=117.64 Aligned_cols=89 Identities=31% Similarity=0.402 Sum_probs=70.0
Q ss_pred hhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEec
Q 003364 435 AVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDC 514 (826)
Q Consensus 435 ~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~ 514 (826)
++||++....+++.......|+|+|.||++|+.+.|.... ....+..+++++.+||+|++|||+|+++
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~----------~~~~~~~~~~~~~~pF~S~rK~msvv~~-- 68 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGID----------IKEIRSKYKIVAEIPFDSERKRMSVVVR-- 68 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCc----------HHHHHhhcceeEEEccCcccceeEEEEe--
Confidence 4799887655543333225799999999999999864322 1334677999999999999999999998
Q ss_pred CCCeEEEEecCchhhhhhhhh
Q 003364 515 HSGNISLLSKGADEAILPYAH 535 (826)
Q Consensus 515 ~~~~~~~~~KGa~e~i~~~~~ 535 (826)
+++.+++|+|||||.|+++|+
T Consensus 69 ~~~~~~~~~KGA~e~il~~Ct 89 (91)
T PF13246_consen 69 NDGKYILYVKGAPEVILDRCT 89 (91)
T ss_pred CCCEEEEEcCCChHHHHHhcC
Confidence 345678899999999999996
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.9e-13 Score=137.87 Aligned_cols=176 Identities=20% Similarity=0.288 Sum_probs=111.3
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEec-CCC-------HHHHHHHHHHHHH
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSID-GKT-------EDEVCRSLERVLL 681 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~~-~~~-------~~~~~~~~~~~~~ 681 (826)
.++++.+.++|++++++|++++++|||++..+..+++++++..+ ..+|..+... ++. .+.....+....+
T Consensus 15 ~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~ 94 (256)
T TIGR00099 15 HTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKK 94 (256)
T ss_pred CccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999999987643 2334444322 221 1222222221111
Q ss_pred H-ccc----------ccCC-------------------------CC-ceEEEEcC--hhHHHHHHHHHH-HH-hhhcccc
Q 003364 682 T-MRI----------TTSE-------------------------PK-DVAFVVDG--WALEIALKHYRK-AF-TELAILS 720 (826)
Q Consensus 682 ~-~~~----------~~~~-------------------------~~-~~~l~~~g--~~~~~~~~~~~~-~~-~~~~~~~ 720 (826)
. ... .... .. ...+.+.. ...+.+.+.+.+ .+ ..+....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (256)
T TIGR00099 95 HGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVS 174 (256)
T ss_pred cCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEE
Confidence 0 000 0000 00 00011111 111222222221 12 1232333
Q ss_pred ceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 721 RTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 721 ~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
....+.+++|. +|+..++.+.+ ..+++++|||+.||++|++.||+|+|| +|+.+++++.|++++.++
T Consensus 175 s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~-~na~~~~k~~a~~~~~~n 247 (256)
T TIGR00099 175 SGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAM-GNADEELKALADYVTDSN 247 (256)
T ss_pred ecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEe-cCchHHHHHhCCEEecCC
Confidence 34557899987 59988887765 357899999999999999999999999 899999999999999765
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.1e-12 Score=130.10 Aligned_cols=171 Identities=13% Similarity=0.099 Sum_probs=103.0
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEecC-C-------------CHHHHHHHHH
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDG-K-------------TEDEVCRSLE 677 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~~~-~-------------~~~~~~~~~~ 677 (826)
..+.++++|++|+++|++++++|||+...+..+++++|+..+ ..+|.++...+ . ..+.....++
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 445799999999999999999999999999999999998543 33444443321 1 1112222222
Q ss_pred HHHHH--ccc------------------------ccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc
Q 003364 678 RVLLT--MRI------------------------TTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS 731 (826)
Q Consensus 678 ~~~~~--~~~------------------------~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~ 731 (826)
..... ... .........++......+.+.+.+.+ . .+.... ...+.++.|.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~-s~~~~ei~~~ 173 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVE-L-GLEVTH-GNRFYHVLGA 173 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHH-c-CCEEEe-CCceEEEecC
Confidence 11110 000 00000111111111222222222211 1 122222 2246788886
Q ss_pred --cHHHHHHHhhc----C--CCeEEEEcCCcccHHhHHhCCccEEecCCch---HHHHhh--c-cccccch
Q 003364 732 --QKAQLVELLKS----C--DYRTLAIGDGGNDVRMIQKADIGVGISGREG---LQAARA--A-DYSIGKF 788 (826)
Q Consensus 732 --~K~~iv~~l~~----~--~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~---~~~~~~--A-d~v~~~~ 788 (826)
+|+..++.+.+ . .+++++|||+.||++||+.||+|||| +|+. +++|+. | ++|+.++
T Consensus 174 ~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam-~Na~~~~~~lk~~~~a~~~vt~~~ 243 (256)
T TIGR01486 174 GSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVV-PGPNGPNVSLKPGDPGSFLLTPAP 243 (256)
T ss_pred CCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEe-CCCCCCccccCccCCCcEEEcCCC
Confidence 58876666543 4 67899999999999999999999999 8987 468876 4 5888654
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.3e-11 Score=124.19 Aligned_cols=178 Identities=19% Similarity=0.176 Sum_probs=107.9
Q ss_pred CcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEecCC-----------
Q 003364 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGK----------- 667 (826)
Q Consensus 601 ~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~~~~----------- 667 (826)
|.+++.- .+.+.+.++++|++|+++|++++++|||+...+..+++++|+..+ ..+|.++...+.
T Consensus 12 DGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~ 88 (273)
T PRK00192 12 DGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERL 88 (273)
T ss_pred cccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccc
Confidence 4555531 345778899999999999999999999999999999999998654 223444432111
Q ss_pred -----------CHHHHHHHHHHHHHHcc----c----------------------ccCCCCceEEE-E-cChhHHHHHHH
Q 003364 668 -----------TEDEVCRSLERVLLTMR----I----------------------TTSEPKDVAFV-V-DGWALEIALKH 708 (826)
Q Consensus 668 -----------~~~~~~~~~~~~~~~~~----~----------------------~~~~~~~~~l~-~-~g~~~~~~~~~ 708 (826)
..+.....+........ . .........++ . +....+.+.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (273)
T PRK00192 89 KGDYWVIELGPPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEA 168 (273)
T ss_pred cCCceEEEcCCCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHH
Confidence 11111111111111000 0 00000011111 1 12222222222
Q ss_pred HHHHHhhhccccceeEEEEeCcc-cHHHHHHHhh----cCC-CeEEEEcCCcccHHhHHhCCccEEecCCchHHHH----
Q 003364 709 YRKAFTELAILSRTAICCRVTPS-QKAQLVELLK----SCD-YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA---- 778 (826)
Q Consensus 709 ~~~~~~~~~~~~~~~i~~~~~p~-~K~~iv~~l~----~~~-~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~---- 778 (826)
+. .+ .+.... ...+.++.|. +|+..++.+. ... +.|++|||+.||++|++.||+|+|| +|+.+++|
T Consensus 169 l~-~~-~~~~~~-~~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam-~NA~~~~k~~~~ 244 (273)
T PRK00192 169 LK-RL-GLKVTR-GGRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVV-PGPDGPNPPLLP 244 (273)
T ss_pred HH-Hc-CCEEEE-CCeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEe-CCCCCCCcccCc
Confidence 21 11 122222 2356677776 6887776665 357 9999999999999999999999999 99999999
Q ss_pred hhc-cccc
Q 003364 779 RAA-DYSI 785 (826)
Q Consensus 779 ~~A-d~v~ 785 (826)
.+| +.++
T Consensus 245 ~~a~~~v~ 252 (273)
T PRK00192 245 GIADGEFI 252 (273)
T ss_pred cccCCceE
Confidence 666 6777
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.23 E-value=1e-10 Score=120.30 Aligned_cols=171 Identities=17% Similarity=0.226 Sum_probs=107.3
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCC----CCCcEEEecCCCH-HHHH-H---------H
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE----PKGQLLSIDGKTE-DEVC-R---------S 675 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~----~~~~~~~~~~~~~-~~~~-~---------~ 675 (826)
..++.|.+.+++++++++|+.++++|||+...+..+.+++++..+. .+|..+...+... +... . .
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 4567899999999999999999999999999999999999976552 2444444333111 1110 0 0
Q ss_pred HHHHHHHccc---c---cCCCCceEEEEcChhHHHHHHHHHHHHhh----hccccceeEEEEeCcc--cHHHHHHHhhc-
Q 003364 676 LERVLLTMRI---T---TSEPKDVAFVVDGWALEIALKHYRKAFTE----LAILSRTAICCRVTPS--QKAQLVELLKS- 742 (826)
Q Consensus 676 ~~~~~~~~~~---~---~~~~~~~~l~~~g~~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~p~--~K~~iv~~l~~- 742 (826)
+......+.. . .....+..+.............+.+.+.. ...+.....+.++.|. +|+..++.+.+
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 1111111111 0 01112333333333322233333333322 1122223346688875 69988887755
Q ss_pred ---CCCeEEEEcCCcccHHhHHh-CCccEEecCCchHHHHhhcc
Q 003364 743 ---CDYRTLAIGDGGNDVRMIQK-ADIGVGISGREGLQAARAAD 782 (826)
Q Consensus 743 ---~~~~v~~iGDg~ND~~ml~~-A~vgIam~gn~~~~~~~~Ad 782 (826)
..+.+++|||+.||++||+. ++.||+| +|+.+++++.++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~-~na~~~~k~~~~ 221 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIV-SNAQEELLQWYD 221 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEE-CCCHHHHHHHHH
Confidence 36789999999999999998 6799999 999999997543
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.2e-10 Score=122.95 Aligned_cols=168 Identities=19% Similarity=0.196 Sum_probs=106.4
Q ss_pred ccCCchHHHH-HHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCC----CCCcEEEecCCCH-HHHH-HHH---------
Q 003364 613 RLQDGVPETI-ETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE----PKGQLLSIDGKTE-DEVC-RSL--------- 676 (826)
Q Consensus 613 ~l~~~~~~aI-~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~----~~~~~~~~~~~~~-~~~~-~~~--------- 676 (826)
.+.+...+++ ++++++|+.++++|||++..+..+.++.++..|. .+|..+...+... +... ..+
T Consensus 28 ~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 28 NLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIV 107 (413)
T ss_pred chhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhH
Confidence 3444455666 8899999999999999999999999999987773 2444443322111 1111 111
Q ss_pred HHHHHHccc------ccCCCCceEEEEcChhHHHHHHHHHHHHhh----hccccceeEEEEeCcc--cHHHHHHHhhcC-
Q 003364 677 ERVLLTMRI------TTSEPKDVAFVVDGWALEIALKHYRKAFTE----LAILSRTAICCRVTPS--QKAQLVELLKSC- 743 (826)
Q Consensus 677 ~~~~~~~~~------~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~p~--~K~~iv~~l~~~- 743 (826)
.+....+.. ..+...+..+.........+.+.+.+.+.. +........+.++.|. +|+..++.|.+.
T Consensus 108 ~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~ 187 (413)
T PLN02382 108 VEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKL 187 (413)
T ss_pred HHHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHh
Confidence 111111100 001122333444443444444555555532 2222334467899987 599888777543
Q ss_pred ------CCeEEEEcCCcccHHhHHhCC-ccEEecCCchHHHHhhc
Q 003364 744 ------DYRTLAIGDGGNDVRMIQKAD-IGVGISGREGLQAARAA 781 (826)
Q Consensus 744 ------~~~v~~iGDg~ND~~ml~~A~-vgIam~gn~~~~~~~~A 781 (826)
.+++++|||+.||++||+.|| .|||| +|+.+++|+.+
T Consensus 188 ~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam-~NA~~elk~~a 231 (413)
T PLN02382 188 KAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMV-SNAQEELLQWY 231 (413)
T ss_pred hhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEE-cCCcHHHHHHH
Confidence 568999999999999999999 79999 99999999843
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.15 E-value=4e-10 Score=115.09 Aligned_cols=167 Identities=18% Similarity=0.231 Sum_probs=99.4
Q ss_pred HHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC----CCCCcEEEecC-CCHHHHH-H---------HHHHHHHHcc
Q 003364 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP----EPKGQLLSIDG-KTEDEVC-R---------SLERVLLTMR 684 (826)
Q Consensus 620 ~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~----~~~~~~~~~~~-~~~~~~~-~---------~~~~~~~~~~ 684 (826)
++++ ++++|++++++|||+...+..+...+++..+ ..+|..+.... ....... . .+......+.
T Consensus 22 ~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (236)
T TIGR02471 22 ELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQPDRFWQKHIDHDWRRQAVVEALADIP 100 (236)
T ss_pred HHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCCCChhHHHHHhcCCCHHHHHHHHhcCC
Confidence 6666 6999999999999999999999999987533 22333332211 0001100 0 0111111111
Q ss_pred ---cccCC---CCceEEEEcChh---HHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhcC----CCeEEE
Q 003364 685 ---ITTSE---PKDVAFVVDGWA---LEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLA 749 (826)
Q Consensus 685 ---~~~~~---~~~~~l~~~g~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~----~~~v~~ 749 (826)
..... ..+..+...... .+.+.+.+...............+.++.|. +|+..++.+.+. .+.+++
T Consensus 101 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~ 180 (236)
T TIGR02471 101 GLTLQDDQEQGPFKISYLLDPEGEPILPQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQILV 180 (236)
T ss_pred CcEeCChhcCCCeeEEEEECcccchHHHHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHHEEE
Confidence 11111 122333333321 222222222211111111122234578876 699888887653 457999
Q ss_pred EcCCcccHHhHHhCCccEEecCCchHHHHhhcc----ccccch
Q 003364 750 IGDGGNDVRMIQKADIGVGISGREGLQAARAAD----YSIGKF 788 (826)
Q Consensus 750 iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad----~v~~~~ 788 (826)
|||+.||++||+.+++||+| +|+.+++|+.|+ +|+.++
T Consensus 181 ~GD~~nD~~ml~~~~~~iav-~na~~~~k~~a~~~~~~v~~~~ 222 (236)
T TIGR02471 181 AGDSGNDEEMLRGLTLGVVV-GNHDPELEGLRHQQRIYFANNP 222 (236)
T ss_pred EcCCccHHHHHcCCCcEEEE-cCCcHHHHHhhcCCcEEEcCCC
Confidence 99999999999999999999 999999999999 777653
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=7.7e-10 Score=113.38 Aligned_cols=172 Identities=16% Similarity=0.193 Sum_probs=100.4
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC--CC--CCCCcEEEecCCCHH-----------HHHHHHH
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI--SP--EPKGQLLSIDGKTED-----------EVCRSLE 677 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~--~~--~~~~~~~~~~~~~~~-----------~~~~~~~ 677 (826)
++.+.++++|++++++|++++++|||++..+.......+.. .+ ..+|.++..++.... .....++
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~~~~i~~~~i~~~l~~~~~~~i~~ 101 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKDGELFHSQSILKFLGEEKLKKFIN 101 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEECCeEEEEEcchhcCCHHHHHHHHH
Confidence 58999999999999999999999999999877665433211 11 233444433332221 1111111
Q ss_pred HHHH---HcccccCCCC-------ceEE--EE--------------c--ChhHHHHHHHHHHHHhhhccccc--eeEEEE
Q 003364 678 RVLL---TMRITTSEPK-------DVAF--VV--------------D--GWALEIALKHYRKAFTELAILSR--TAICCR 727 (826)
Q Consensus 678 ~~~~---~~~~~~~~~~-------~~~l--~~--------------~--g~~~~~~~~~~~~~~~~~~~~~~--~~i~~~ 727 (826)
.... .......... ...+ .. . ........+.+.+.+..+....+ ...+.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~~le 181 (247)
T PTZ00174 102 FCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKFIQDLKKEFSDLGLKFSIGGQISFD 181 (247)
T ss_pred HHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHHHHHHHHhcCCCCeEEEecCceEEE
Confidence 1111 1111100000 0000 00 0 01111222223333332222222 235789
Q ss_pred eCcc--cHHHHHHHhhcCCCeEEEEcC----CcccHHhHHhC-CccEEecCCchHHHHhhccccc
Q 003364 728 VTPS--QKAQLVELLKSCDYRTLAIGD----GGNDVRMIQKA-DIGVGISGREGLQAARAADYSI 785 (826)
Q Consensus 728 ~~p~--~K~~iv~~l~~~~~~v~~iGD----g~ND~~ml~~A-~vgIam~gn~~~~~~~~Ad~v~ 785 (826)
++|. +|+..++.|.+..++|++||| |.||++||+.| -.|+++ +|+.+.+|..|.++.
T Consensus 182 I~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v-~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 182 VFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSV-KNPEDTIKILKELFL 245 (247)
T ss_pred eeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEe-CCHHHHHHHHHHHhc
Confidence 9997 699999999888899999999 99999999976 467777 688888888776543
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.2e-10 Score=107.35 Aligned_cols=98 Identities=19% Similarity=0.251 Sum_probs=81.2
Q ss_pred HHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcC
Q 003364 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (826)
Q Consensus 620 ~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 699 (826)
.+|+.|+++|+++.++|+.+...+...++.+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 58999999999999999999999999999999821
Q ss_pred hhHHHHHHHHHHHHhhhccccceeEEEEeCc--ccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHH
Q 003364 700 WALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQA 777 (826)
Q Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~ 777 (826)
.|....| ..-..+++.++...+++++|||+.||++|++.||+++|| +|+.+++
T Consensus 76 ------------------------~f~~~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am-~nA~~~l 130 (169)
T TIGR02726 76 ------------------------FHEGIKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAV-GDAVADV 130 (169)
T ss_pred ------------------------EEecCCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEEC-cCchHHH
Confidence 1111122 233456666666678999999999999999999999999 9999999
Q ss_pred Hhhccccccc
Q 003364 778 ARAADYSIGK 787 (826)
Q Consensus 778 ~~~Ad~v~~~ 787 (826)
+..|++|+..
T Consensus 131 k~~A~~I~~~ 140 (169)
T TIGR02726 131 KEAAAYVTTA 140 (169)
T ss_pred HHhCCEEcCC
Confidence 9999999853
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.04 E-value=3.5e-09 Score=107.01 Aligned_cols=153 Identities=19% Similarity=0.225 Sum_probs=89.8
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC-CC--CCCCcEEEe-cC-------------CCHHHHHHHH
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI-SP--EPKGQLLSI-DG-------------KTEDEVCRSL 676 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~-~~--~~~~~~~~~-~~-------------~~~~~~~~~~ 676 (826)
..+.++++|++|+++|++++++|||+...+..+++.+|+. .+ ..+|..+.. .+ ...+.....+
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 96 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWREEPGYPRIILGISYGIIRLVL 96 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCcccccCCCceEEecCCCHHHHHHHH
Confidence 4445999999999999999999999999999999999985 22 223433322 11 1111122222
Q ss_pred HHHHHHccc--------------------------ccCCCCceEEEE--cChhHHHHHHHHHHHHhhhccccceeEEEEe
Q 003364 677 ERVLLTMRI--------------------------TTSEPKDVAFVV--DGWALEIALKHYRKAFTELAILSRTAICCRV 728 (826)
Q Consensus 677 ~~~~~~~~~--------------------------~~~~~~~~~l~~--~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 728 (826)
+...+.... .........+.. +....+.+.+.+ +.. .+.... ...+.++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~-~~~~~~-~~~~~ei 173 (221)
T TIGR02463 97 ETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPRFTALL-ADL-GLAIVQ-GNRFSHV 173 (221)
T ss_pred HHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHHHHHHH-HHc-CCeEEe-cCCeeEE
Confidence 211111000 000011112222 122223222222 211 222222 2456788
Q ss_pred Ccc--cHHHHHHHhh----cCCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 729 TPS--QKAQLVELLK----SCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 729 ~p~--~K~~iv~~l~----~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
.|. +|+..++.+. ...++|++|||+.||++||+.||+|||+
T Consensus 174 ~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 174 LGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred ecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 887 5887666554 4578899999999999999999999997
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=5.3e-09 Score=116.94 Aligned_cols=157 Identities=15% Similarity=0.180 Sum_probs=95.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEe----------------------cCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSI----------------------DGKT 668 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~----------------------~~~~ 668 (826)
.+.+.++++|++|+++|+.++++|||+...+..+++++|+..+ ..+|..+.. .+..
T Consensus 433 ~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~~~~~~~~~~~~~~~~~iI~~~~l~ 512 (694)
T PRK14502 433 YSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPKDYFRLPFAYDRVAGNYLVIELGMA 512 (694)
T ss_pred ccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECCCcccccccccccCCCeEEEEcCCC
Confidence 3556889999999999999999999999999999999997432 222333322 2222
Q ss_pred HHHHHHHHHHHHHHcc-------------ccc--C----------------------CCCceEEEEcCh--hHHHHHHHH
Q 003364 669 EDEVCRSLERVLLTMR-------------ITT--S----------------------EPKDVAFVVDGW--ALEIALKHY 709 (826)
Q Consensus 669 ~~~~~~~~~~~~~~~~-------------~~~--~----------------------~~~~~~l~~~g~--~~~~~~~~~ 709 (826)
.+.+...++...+... ... . ......+...++ .++.+.+.+
T Consensus 513 ~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~TgL~~~~a~~a~~Re~seKIl~~gd~e~Leel~~~L 592 (694)
T PRK14502 513 YKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRLTDLNLKQAELAKQREYSETVHIEGDKRSTNIVLNHI 592 (694)
T ss_pred HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHhhCCCHHHHHHHhhccCceeEEEcCCHHHHHHHHHHH
Confidence 3333333332222110 000 0 001112222222 222222222
Q ss_pred HHHHhhhccccceeEEEEeCcc-cHHHHHHHhhcC----CCeEEEE--cCCcccHHhHHhCCccEEecCC
Q 003364 710 RKAFTELAILSRTAICCRVTPS-QKAQLVELLKSC----DYRTLAI--GDGGNDVRMIQKADIGVGISGR 772 (826)
Q Consensus 710 ~~~~~~~~~~~~~~i~~~~~p~-~K~~iv~~l~~~----~~~v~~i--GDg~ND~~ml~~A~vgIam~gn 772 (826)
.++ .+.... ...|.++.+. +|+..++.|.+. .+.+++| |||.||++||+.||+||||.+.
T Consensus 593 ~~~--~l~v~~-g~rfleI~~gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~ 659 (694)
T PRK14502 593 QQS--GLEYSF-GGRFYEVTGGNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRP 659 (694)
T ss_pred HHc--CcEEEE-CCEEEEeCCCCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCC
Confidence 222 223222 5667788854 799888888663 4567777 9999999999999999999443
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.1e-09 Score=115.26 Aligned_cols=127 Identities=24% Similarity=0.260 Sum_probs=91.3
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.++.|++.|++++++||.....+..+.+++|+...-.+ .+.+.
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an--~lei~--------------------------- 231 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVAN--ELEIM--------------------------- 231 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEe--EEEEE---------------------------
Confidence 5789999999999999999999999998888888888887321100 00000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEE-eCcccHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccE
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-VTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGV 767 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~p~~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgI 767 (826)
+|. + ...+..+ +..+.|...++.+.+ ..+++++||||.||++|++.||+||
T Consensus 232 -----dg~------------------l-tg~v~g~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgi 287 (322)
T PRK11133 232 -----DGK------------------L-TGNVLGDIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGI 287 (322)
T ss_pred -----CCE------------------E-EeEecCccCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeE
Confidence 000 0 0000101 233568876666654 3578999999999999999999999
Q ss_pred EecCCchHHHHhhccccccchhcchhhe
Q 003364 768 GISGREGLQAARAADYSIGKFRFLKRLI 795 (826)
Q Consensus 768 am~gn~~~~~~~~Ad~v~~~~~~l~~l~ 795 (826)
|| |+.+.+++.||+++.. ..|..++
T Consensus 288 A~--nAkp~Vk~~Ad~~i~~-~~l~~~l 312 (322)
T PRK11133 288 AY--HAKPKVNEQAQVTIRH-ADLMGVL 312 (322)
T ss_pred Ee--CCCHHHHhhCCEEecC-cCHHHHH
Confidence 99 7889999999999974 5554443
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.2e-08 Score=102.62 Aligned_cols=156 Identities=16% Similarity=0.180 Sum_probs=89.5
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEe----------------------cC
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSI----------------------DG 666 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~----------------------~~ 666 (826)
.+...++++++|++|+++|++++++|||+...+..+++++|+..+ ..+|..+.. .+
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~i~~~~ 92 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFPFPVGAGREVGNYEVIELG 92 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccccccccccccCCCeEEEEcC
Confidence 455677899999999999999999999999999999999997543 223333322 22
Q ss_pred CCHHHHHHHHHHHHHHcccc--cC-----------------------CCCceEEEEcChhHHHHHHHHHHHHhhhccccc
Q 003364 667 KTEDEVCRSLERVLLTMRIT--TS-----------------------EPKDVAFVVDGWALEIALKHYRKAFTELAILSR 721 (826)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~--~~-----------------------~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 721 (826)
...+.+...++...+..... .. ...+..+..+...+..+.+.+.. ..+.....
T Consensus 93 l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~e~~~~~~~~~~~--~~~~~~~s 170 (225)
T TIGR02461 93 KPVAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFLWSREGWEAILVTARA--RGLKYTHG 170 (225)
T ss_pred CCHHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccCCCHHHHHHHHHHHHH--cCCcEEEC
Confidence 22333332222221100000 00 00000011111112222222211 11222222
Q ss_pred eeEEEEeCcc-cHHHHHHHhhc------CCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 722 TAICCRVTPS-QKAQLVELLKS------CDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 722 ~~i~~~~~p~-~K~~iv~~l~~------~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
.. +..+.+. +|+..++.+.. ....+++|||+.||++||+.||+||++
T Consensus 171 ~~-~~~i~~~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v 224 (225)
T TIGR02461 171 GR-FYTVHGGSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLV 224 (225)
T ss_pred CE-EEEECCCCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEec
Confidence 33 3456543 69887777754 234799999999999999999999987
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.2e-09 Score=101.02 Aligned_cols=96 Identities=21% Similarity=0.184 Sum_probs=77.2
Q ss_pred HHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcCh
Q 003364 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (826)
Q Consensus 621 aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 700 (826)
+|++|+++|+++.++||++...+..+++.+|+...
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------------------------------------------- 70 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------------------------------------------- 70 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE---------------------------------------------
Confidence 89999999999999999999999999999997210
Q ss_pred hHHHHHHHHHHHHhhhccccceeEEEEeCcccHH----HHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHH
Q 003364 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKA----QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 776 (826)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~----~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~ 776 (826)
+.. ...|. ++++.++...+.++++||+.||++|++.|+++++| .++.+.
T Consensus 71 ------------------------~~~--~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v-~~~~~~ 123 (154)
T TIGR01670 71 ------------------------YQG--QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAV-ADAHPL 123 (154)
T ss_pred ------------------------Eec--ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEec-CCcCHH
Confidence 100 12233 34444444568899999999999999999999999 788788
Q ss_pred HHhhccccccch
Q 003364 777 AARAADYSIGKF 788 (826)
Q Consensus 777 ~~~~Ad~v~~~~ 788 (826)
++..|++++.+.
T Consensus 124 ~~~~a~~i~~~~ 135 (154)
T TIGR01670 124 LIPRADYVTRIA 135 (154)
T ss_pred HHHhCCEEecCC
Confidence 888999999654
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.3e-09 Score=108.64 Aligned_cols=175 Identities=18% Similarity=0.207 Sum_probs=102.5
Q ss_pred ccCCchHHHHHHHHH-cCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEE-ecCCC-----HHHHHHHHHHHHHH-cc
Q 003364 613 RLQDGVPETIETLRK-AGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLS-IDGKT-----EDEVCRSLERVLLT-MR 684 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~-~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~-~~ 684 (826)
.+.+.++++|++|++ .|+.++++|||+...+..++..+++.-...+|..+. .++.. ..+....+...... ..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 577899999999998 899999999999999998887776432223333322 11110 01111111111111 10
Q ss_pred ---cccCCCCceEEEEcCh---hHHHHHH----HHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhcC----CCeEE
Q 003364 685 ---ITTSEPKDVAFVVDGW---ALEIALK----HYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTL 748 (826)
Q Consensus 685 ---~~~~~~~~~~l~~~g~---~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~----~~~v~ 748 (826)
-..-+.+...+..... ....... .+.+.+.. ..+.....+.++.|. +|+..++.+.+. .+.++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~-~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~ 194 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQ-LALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPV 194 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCc-eEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEE
Confidence 0000112222222221 1111122 22222221 222345567788887 799888876553 56899
Q ss_pred EEcCCcccHHhHHhC----CccEEecCCchHHHHhhccccccchhcchh
Q 003364 749 AIGDGGNDVRMIQKA----DIGVGISGREGLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 749 ~iGDg~ND~~ml~~A----~vgIam~gn~~~~~~~~Ad~v~~~~~~l~~ 793 (826)
+|||+.||.+||+.+ ++||+| ||+.+ .|++.+.+-.++..
T Consensus 195 ~~GD~~nD~~mf~~~~~~~g~~vav-g~a~~----~A~~~l~~~~~v~~ 238 (266)
T PRK10187 195 FVGDDLTDEAGFAVVNRLGGISVKV-GTGAT----QASWRLAGVPDVWS 238 (266)
T ss_pred EEcCCccHHHHHHHHHhcCCeEEEE-CCCCC----cCeEeCCCHHHHHH
Confidence 999999999999999 999999 88753 46777766554443
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.92 E-value=6.3e-09 Score=102.40 Aligned_cols=124 Identities=23% Similarity=0.190 Sum_probs=88.5
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.|+.+++.| +++++||-....+.++++++|+...-.+. +..++.
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~--l~~~~~------------------------- 119 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHK--LEIDDS------------------------- 119 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhcee--eEEecC-------------------------
Confidence 47899999999999975 99999999999999999999984321110 000000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn 772 (826)
|. +. ... ...+..|...++.++..+..++++|||.||++|++.||+||++ +
T Consensus 120 ------g~------------------~t-G~~--~~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~--~ 170 (203)
T TIGR02137 120 ------DR------------------VV-GYQ--LRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF--H 170 (203)
T ss_pred ------Ce------------------eE-Cee--ecCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEe--c
Confidence 00 00 000 1245679999999987777899999999999999999999999 4
Q ss_pred chHHHHhhccccc--cchhcchh
Q 003364 773 EGLQAARAADYSI--GKFRFLKR 793 (826)
Q Consensus 773 ~~~~~~~~Ad~v~--~~~~~l~~ 793 (826)
+.+.+++.||=.. .++..|..
T Consensus 171 ak~~~~~~~~~~~~~~~~~~~~~ 193 (203)
T TIGR02137 171 APENVIREFPQFPAVHTYEDLKR 193 (203)
T ss_pred CCHHHHHhCCCCCcccCHHHHHH
Confidence 5566777665432 44444443
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.91 E-value=5.3e-09 Score=103.35 Aligned_cols=120 Identities=23% Similarity=0.243 Sum_probs=89.0
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEe-cCCCHHHHHHHHHHHHHHcccccCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSI-DGKTEDEVCRSLERVLLTMRITTSEP 690 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (826)
.+++|++.+.++.++++|++++++||-...-+.++++.+|+...-.+ .+.. +| .
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an--~l~~~dG-~---------------------- 130 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVAN--ELEIDDG-K---------------------- 130 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheee--EEEEeCC-E----------------------
Confidence 67999999999999999999999999999999999999998654322 1100 00 0
Q ss_pred CceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeC-cccHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCc
Q 003364 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT-PSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADI 765 (826)
Q Consensus 691 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-p~~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~v 765 (826)
-...+...+. .+.|...++.+.. ..+.++++|||.||.|||+.||.
T Consensus 131 -----------------------------ltG~v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~ 181 (212)
T COG0560 131 -----------------------------LTGRVVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGL 181 (212)
T ss_pred -----------------------------EeceeeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCC
Confidence 0122333333 3568876655544 34679999999999999999999
Q ss_pred cEEecCCchHHHHhhccccccc
Q 003364 766 GVGISGREGLQAARAADYSIGK 787 (826)
Q Consensus 766 gIam~gn~~~~~~~~Ad~v~~~ 787 (826)
+|+. |+.+.+.+.|+.....
T Consensus 182 ~ia~--n~~~~l~~~a~~~~~~ 201 (212)
T COG0560 182 PIAV--NPKPKLRALADVRIWP 201 (212)
T ss_pred CeEe--CcCHHHHHHHHHhcCh
Confidence 9999 5566677777766544
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.83 E-value=5.2e-09 Score=92.89 Aligned_cols=95 Identities=21% Similarity=0.213 Sum_probs=79.2
Q ss_pred HHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcC
Q 003364 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (826)
Q Consensus 620 ~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 699 (826)
..|+.+.+.|+++.++|||....+..-|+++||..
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------------------- 76 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------------------- 76 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------------------
Confidence 47999999999999999999999999999999821
Q ss_pred hhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHH----hhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchH
Q 003364 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVEL----LKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775 (826)
Q Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~----l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~ 775 (826)
+|. -..+|...++. ++...++|+++||..||.|+|+.+|+++|. .++++
T Consensus 77 ------------------------~~q--G~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~-~dAh~ 129 (170)
T COG1778 77 ------------------------LYQ--GISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAV-ADAHP 129 (170)
T ss_pred ------------------------eee--chHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccc-cccCH
Confidence 111 12356554444 444578999999999999999999999999 99999
Q ss_pred HHHhhcccccc
Q 003364 776 QAARAADYSIG 786 (826)
Q Consensus 776 ~~~~~Ad~v~~ 786 (826)
.+++.||||+.
T Consensus 130 ~v~~~a~~Vt~ 140 (170)
T COG1778 130 LLKQRADYVTS 140 (170)
T ss_pred HHHHhhHhhhh
Confidence 99999999994
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=9.2e-09 Score=99.95 Aligned_cols=110 Identities=23% Similarity=0.232 Sum_probs=83.1
Q ss_pred HHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcC
Q 003364 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (826)
Q Consensus 620 ~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 699 (826)
.+|+.|+++|+++.++||++...+..+++++|+...
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~-------------------------------------------- 90 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL-------------------------------------------- 90 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee--------------------------------------------
Confidence 699999999999999999999999999999997211
Q ss_pred hhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHH----HHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchH
Q 003364 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQ----LVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775 (826)
Q Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~----iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~ 775 (826)
|. ....|.. +++.++..++++++|||+.||++|++.||+++++ +++.+
T Consensus 91 -------------------------f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v-~~~~~ 142 (183)
T PRK09484 91 -------------------------YQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAV-ADAHP 142 (183)
T ss_pred -------------------------ec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEec-CChhH
Confidence 10 1123443 3444444567899999999999999999999998 77777
Q ss_pred HHHhhcccccc------chhcchhhee-ecchh
Q 003364 776 QAARAADYSIG------KFRFLKRLIL-VHGRY 801 (826)
Q Consensus 776 ~~~~~Ad~v~~------~~~~l~~l~l-~~gr~ 801 (826)
..+..||+++. ....+..+++ ..|++
T Consensus 143 ~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~~~ 175 (183)
T PRK09484 143 LLLPRADYVTRIAGGRGAVREVCDLLLLAQGKL 175 (183)
T ss_pred HHHHhCCEEecCCCCCCHHHHHHHHHHHhcCCh
Confidence 77779999995 3455555443 23554
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.6e-07 Score=99.54 Aligned_cols=230 Identities=16% Similarity=0.192 Sum_probs=134.7
Q ss_pred HHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCC-------C-cEEEecCC
Q 003364 596 QRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPK-------G-QLLSIDGK 667 (826)
Q Consensus 596 ~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~-------~-~~~~~~~~ 667 (826)
...-.+..|.|++....+.+++....|+.|.++.|+++..|-.+.....-+|.++||...=.- + .-..--+.
T Consensus 809 ~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~p 888 (1354)
T KOG4383|consen 809 DQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGP 888 (1354)
T ss_pred HHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCC
Confidence 344467899999999999999999999999999999999999999999999999998643100 0 00000000
Q ss_pred CHHHHHH---HHHHHHHHcccccCCCC----------ceEEE-EcCh-----------hHHHHHHHHHHHHhhhccccc-
Q 003364 668 TEDEVCR---SLERVLLTMRITTSEPK----------DVAFV-VDGW-----------ALEIALKHYRKAFTELAILSR- 721 (826)
Q Consensus 668 ~~~~~~~---~~~~~~~~~~~~~~~~~----------~~~l~-~~g~-----------~~~~~~~~~~~~~~~~~~~~~- 721 (826)
..+.... .+.+....+...+.+.. ...+. ++.+ .+..-.+..+.|++++..+.-
T Consensus 889 a~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLL 968 (1354)
T KOG4383|consen 889 AHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLL 968 (1354)
T ss_pred CChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCccee
Confidence 0000000 11111111111110000 00000 0000 000011122333333332222
Q ss_pred eeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccH--HhHHhCCccEEecCCchH--------------HHHhhcc---
Q 003364 722 TAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDV--RMIQKADIGVGISGREGL--------------QAARAAD--- 782 (826)
Q Consensus 722 ~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~--~ml~~A~vgIam~gn~~~--------------~~~~~Ad--- 782 (826)
...|.+.+|+.--+.++.++++|+.|++.|...|-- -.+-.||++||+ ..-.+ ..+++.|
T Consensus 969 V~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISial-D~l~~~~C~~e~fg~assismaqandgls 1047 (1354)
T KOG4383|consen 969 VGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIAL-DDLEEPACRLEDFGVASSISMAQANDGLS 1047 (1354)
T ss_pred eeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEe-ccCCCccceecccccchhhhhhhhcCCCC
Confidence 457888899999999999999999999999988843 345678999987 22111 0111223
Q ss_pred --------------ccccchhcchhheeec-chhhHHHHHHHHHHHhhhhHHHHHhhhC
Q 003364 783 --------------YSIGKFRFLKRLILVH-GRYSYNRTAFLSQYSFYKSLLICFIQIL 826 (826)
Q Consensus 783 --------------~v~~~~~~l~~l~l~~-gr~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (826)
+..+.-+.++.+-|++ .|...--+++.+.|.++..+++..++|+
T Consensus 1048 plQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~fl 1106 (1354)
T KOG4383|consen 1048 PLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFL 1106 (1354)
T ss_pred ceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 1112212333322444 7777778899999999999998888764
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=98.76 E-value=2e-08 Score=100.16 Aligned_cols=157 Identities=22% Similarity=0.249 Sum_probs=89.1
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCH--------HHHHHHHHHHHHHcc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE--------DEVCRSLERVLLTMR 684 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 684 (826)
++.+.+.++|++|+++|++++++|||+...+..+++.++..--..+|..+...+... .+.....+.....+.
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 588999999999999999999999999999999988754221233444443322211 111100011111111
Q ss_pred ccc---------CCCCceEEEEcCh-hHHHHHHHHHHHH-------hhhccccceeEEEEeCcc--cHHHHHHHhhc---
Q 003364 685 ITT---------SEPKDVAFVVDGW-ALEIALKHYRKAF-------TELAILSRTAICCRVTPS--QKAQLVELLKS--- 742 (826)
Q Consensus 685 ~~~---------~~~~~~~l~~~g~-~~~~~~~~~~~~~-------~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~--- 742 (826)
... .......+...+. ............. ..+........+.++.|. +|+..++.+.+
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~ 176 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN 176 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC
Confidence 000 0111111111111 0011111111111 112222234456788885 69988877754
Q ss_pred -CCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 743 -CDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 743 -~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
..+.++++||+.||.+|++.+++||||
T Consensus 177 ~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 177 GKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 346799999999999999999999998
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.4e-07 Score=92.36 Aligned_cols=45 Identities=9% Similarity=0.117 Sum_probs=40.5
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP 655 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~ 655 (826)
.+.+.+.++++|++|+++||.++++|||+...+..+.+++++..+
T Consensus 16 ~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p 60 (302)
T PRK12702 16 EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHP 60 (302)
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCe
Confidence 345778899999999999999999999999999999999998654
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.7e-07 Score=93.13 Aligned_cols=120 Identities=24% Similarity=0.338 Sum_probs=83.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.|+.|+++|++++++||.....+..+++.+|+.....+ .+..++..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~--~~~~~~~~------------------------ 138 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFAN--RLEVEDGK------------------------ 138 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEee--EEEEECCE------------------------
Confidence 5889999999999999999999999999999999999998432110 00000000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEE-eCcccHHHHHHHhh----cCCCeEEEEcCCcccHHhHHhCCccE
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-VTPSQKAQLVELLK----SCDYRTLAIGDGGNDVRMIQKADIGV 767 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~p~~K~~iv~~l~----~~~~~v~~iGDg~ND~~ml~~A~vgI 767 (826)
+ ...+... ..+..|..+++.+. ...++++++||+.+|++|++.||+++
T Consensus 139 --------------------------~-~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i 191 (219)
T TIGR00338 139 --------------------------L-TGLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGI 191 (219)
T ss_pred --------------------------E-EEEecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeE
Confidence 0 0000001 11233665555443 34568999999999999999999999
Q ss_pred EecCCchHHHHhhccccccc
Q 003364 768 GISGREGLQAARAADYSIGK 787 (826)
Q Consensus 768 am~gn~~~~~~~~Ad~v~~~ 787 (826)
++ + +.+.++..||+++.+
T Consensus 192 ~~-~-~~~~~~~~a~~~i~~ 209 (219)
T TIGR00338 192 AF-N-AKPKLQQKADICINK 209 (219)
T ss_pred Ee-C-CCHHHHHhchhccCC
Confidence 99 3 345677799999864
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.2e-06 Score=104.18 Aligned_cols=189 Identities=17% Similarity=0.137 Sum_probs=106.7
Q ss_pred cCcEEEEEEee--ccccCCchHHHHHHHHH-cCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCH-------
Q 003364 600 HDLKVLGVTAI--EDRLQDGVPETIETLRK-AGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE------- 669 (826)
Q Consensus 600 ~~l~~lG~i~~--~d~l~~~~~~aI~~l~~-~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~------- 669 (826)
-|.+++....- ...+.+++.++|++|.+ .|+.|+++|||+...........++.--..+|..+...+...
T Consensus 499 ~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~ 578 (726)
T PRK14501 499 YDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVA 578 (726)
T ss_pred cCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcc
Confidence 35555543211 12467899999999999 699999999999999988776655422233344443222110
Q ss_pred HHHHHHHHHHHHHcccc----cCCCCceEEEEc--C--hhHH-HHHHHHHHHHhhh-----ccccceeEEEEeCcc--cH
Q 003364 670 DEVCRSLERVLLTMRIT----TSEPKDVAFVVD--G--WALE-IALKHYRKAFTEL-----AILSRTAICCRVTPS--QK 733 (826)
Q Consensus 670 ~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~--g--~~~~-~~~~~~~~~~~~~-----~~~~~~~i~~~~~p~--~K 733 (826)
......+.......... .-+.+...+... . ..+. ...++..+.+... ..+.....+.++.|. +|
T Consensus 579 ~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnK 658 (726)
T PRK14501 579 TEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNK 658 (726)
T ss_pred hhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCH
Confidence 00111222222211110 001112223221 1 1111 1111222222111 111224456688886 79
Q ss_pred HHHHHHhhcC--CCeEEEEcCCcccHHhHHhC---CccEEecCCchHHHHhhccccccchhcchh
Q 003364 734 AQLVELLKSC--DYRTLAIGDGGNDVRMIQKA---DIGVGISGREGLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 734 ~~iv~~l~~~--~~~v~~iGDg~ND~~ml~~A---~vgIam~gn~~~~~~~~Ad~v~~~~~~l~~ 793 (826)
+..++.+.+. .+.++++||+.||.+||+.+ +++|+| ||+ +..|++.+++.+....
T Consensus 659 G~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~v-G~~----~s~A~~~l~~~~eV~~ 718 (726)
T PRK14501 659 GRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKV-GPG----ESRARYRLPSQREVRE 718 (726)
T ss_pred HHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEE-CCC----CCcceEeCCCHHHHHH
Confidence 9999888763 56899999999999999996 688999 774 3578898887655433
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.47 E-value=3.4e-07 Score=84.32 Aligned_cols=123 Identities=20% Similarity=0.299 Sum_probs=85.9
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEe--cCCCHHHHHHHHHHHHHHcccccCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSI--DGKTEDEVCRSLERVLLTMRITTSEP 690 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (826)
.+.|++++.++.|++.|.++.++||--...+.+++.++||...+-....+.+ +|+-
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~---------------------- 145 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKY---------------------- 145 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcc----------------------
Confidence 4789999999999999999999999999999999999999543211001100 0100
Q ss_pred CceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEE----eCcccHHHHHHHhhcC--CCeEEEEcCCcccHHhHHhCC
Q 003364 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCR----VTPSQKAQLVELLKSC--DYRTLAIGDGGNDVRMIQKAD 764 (826)
Q Consensus 691 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~----~~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~ml~~A~ 764 (826)
.-|-. .....|+++++.+++. ...++|+|||.||++|+..|+
T Consensus 146 --------------------------------~gfd~~~ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~ 193 (227)
T KOG1615|consen 146 --------------------------------LGFDTNEPTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPAD 193 (227)
T ss_pred --------------------------------cccccCCccccCCccHHHHHHHHhCCChheeEEecCCccccccCCchh
Confidence 00001 1122599999998873 467999999999999999988
Q ss_pred ccEEecCCc-hHHHHhhccccccchh
Q 003364 765 IGVGISGRE-GLQAARAADYSIGKFR 789 (826)
Q Consensus 765 vgIam~gn~-~~~~~~~Ad~v~~~~~ 789 (826)
.=|+..||- .+++|..|++-+..|.
T Consensus 194 afi~~~g~~~r~~vk~nak~~~~~f~ 219 (227)
T KOG1615|consen 194 AFIGFGGNVIREGVKANAKWYVTDFY 219 (227)
T ss_pred hhhccCCceEcHhhHhccHHHHHHHH
Confidence 777775543 2345556666555543
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.2e-06 Score=87.47 Aligned_cols=157 Identities=18% Similarity=0.164 Sum_probs=89.9
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHc-CCC--C-CCCCCcEEEecCCCH-----------HHHHHHH
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC-NFI--S-PEPKGQLLSIDGKTE-----------DEVCRSL 676 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~-gi~--~-~~~~~~~~~~~~~~~-----------~~~~~~~ 676 (826)
.++++.+.++|++|+++ ++++++|||+........... ... . -..+|..+..+++.. +.....+
T Consensus 23 ~~i~~~~~~ai~~l~~~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g~~i~~~~l~~~l~~~~~~~ii 101 (245)
T PLN02423 23 KEATPEMLEFMKELRKV-VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDGKLIGTQSLKSFLGEDKLKEFI 101 (245)
T ss_pred CcCCHHHHHHHHHHHhC-CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCCEEEEEecccccCCHHHHHHHH
Confidence 36899999999999987 999999999887775544332 110 0 022333433333322 2222222
Q ss_pred HHHHH---HcccccCC-------CCc-------------------eEEEEcChhHHHHHHHHHHHHhhhcc--ccceeEE
Q 003364 677 ERVLL---TMRITTSE-------PKD-------------------VAFVVDGWALEIALKHYRKAFTELAI--LSRTAIC 725 (826)
Q Consensus 677 ~~~~~---~~~~~~~~-------~~~-------------------~~l~~~g~~~~~~~~~~~~~~~~~~~--~~~~~i~ 725 (826)
+...+ ........ ... ....+ ....+...+.+.+.|..+.. ......+
T Consensus 102 ~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i-~~~~~~~~~~l~~~~~~~~~~~s~~g~~~ 180 (245)
T PLN02423 102 NFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKV-HNIRPKMVSVLREKFAHLNLTYSIGGQIS 180 (245)
T ss_pred HHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCcc-chHHHHHHHHHHHhCCCCcEEEecCCcEE
Confidence 21111 01000000 000 00001 11122233334455544333 2233478
Q ss_pred EEeCcc--cHHHHHHHhhcCCCeEEEEcC----CcccHHhHHh-CCccEEecC
Q 003364 726 CRVTPS--QKAQLVELLKSCDYRTLAIGD----GGNDVRMIQK-ADIGVGISG 771 (826)
Q Consensus 726 ~~~~p~--~K~~iv~~l~~~~~~v~~iGD----g~ND~~ml~~-A~vgIam~g 771 (826)
.+++|. +|+..++.|+ ..++|++||| |.||++||+. .-.|+++++
T Consensus 181 iDi~~~gvnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 181 FDVFPQGWDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred EEEeeCCCCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 899987 6999999999 8899999999 8999999997 556888843
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=8.5e-07 Score=88.49 Aligned_cols=124 Identities=23% Similarity=0.233 Sum_probs=87.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+++ +++.++||.....+..+.+.+|+...-.+ .+...+..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~--~~~~~~~~------------------------ 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCH--SLEVDEDG------------------------ 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcc--eEEECCCC------------------------
Confidence 3579999999999999 99999999999999999999998422110 00000000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEE-eCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-VTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g 771 (826)
...... ..|..|...++.++..++.++++|||.||++|.+.||+|++. +
T Consensus 121 -----------------------------~i~~~~~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~-~ 170 (205)
T PRK13582 121 -----------------------------MITGYDLRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILF-R 170 (205)
T ss_pred -----------------------------eEECccccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEE-C
Confidence 000011 135678888888888888999999999999999999999987 4
Q ss_pred CchHHHHhhccc-cccchhcchh
Q 003364 772 REGLQAARAADY-SIGKFRFLKR 793 (826)
Q Consensus 772 n~~~~~~~~Ad~-v~~~~~~l~~ 793 (826)
.........+++ +..++..|..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~el~~ 193 (205)
T PRK13582 171 PPANVIAEFPQFPAVHTYDELLA 193 (205)
T ss_pred CCHHHHHhCCcccccCCHHHHHH
Confidence 433223335565 6666665544
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.2e-06 Score=89.56 Aligned_cols=154 Identities=21% Similarity=0.333 Sum_probs=91.1
Q ss_pred HHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCC----CCCcEEEe-cCCCHHHHH-H---------HHHHHHHHc---
Q 003364 622 IETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE----PKGQLLSI-DGKTEDEVC-R---------SLERVLLTM--- 683 (826)
Q Consensus 622 I~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~----~~~~~~~~-~~~~~~~~~-~---------~~~~~~~~~--- 683 (826)
++...+.++.++++|||+...+..+.++.++..|+ +.|.-+.. .....+... . .+......+
T Consensus 28 l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l 107 (247)
T PF05116_consen 28 LEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAELPGL 107 (247)
T ss_dssp HHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCHCCE
T ss_pred HHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHhhCc
Confidence 33345788899999999999999999999986652 22333333 111111111 1 111222211
Q ss_pred ccc---cCCCCceEEEEcChhHHHHHHHHHHHHhh----hccccceeEEEEeCcc--cHHHHHHHhhcC----CCeEEEE
Q 003364 684 RIT---TSEPKDVAFVVDGWALEIALKHYRKAFTE----LAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAI 750 (826)
Q Consensus 684 ~~~---~~~~~~~~l~~~g~~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~p~--~K~~iv~~l~~~----~~~v~~i 750 (826)
... .....+..+.+...........+.+.+.. ...+.....+.++.|. +|+.++++|+.. .+.|+++
T Consensus 108 ~~q~~~~q~~~k~sy~~~~~~~~~~~~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~a 187 (247)
T PF05116_consen 108 RPQPESEQRPFKISYYVDPDDSADILEEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLVA 187 (247)
T ss_dssp EEGGCCCGCCTCECEEEETTSHCHHHHHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEEE
T ss_pred ccCCccccCCeeEEEEEecccchhHHHHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEEE
Confidence 111 12233555556655554444555544432 1122234456788886 699999998874 4689999
Q ss_pred cCCcccHHhHHhCCccEEecCCchHH
Q 003364 751 GDGGNDVRMIQKADIGVGISGREGLQ 776 (826)
Q Consensus 751 GDg~ND~~ml~~A~vgIam~gn~~~~ 776 (826)
||+.||.+||..++.||.+ +|+.++
T Consensus 188 GDSgND~~mL~~~~~~vvV-~Na~~e 212 (247)
T PF05116_consen 188 GDSGNDLEMLEGGDHGVVV-GNAQPE 212 (247)
T ss_dssp ESSGGGHHHHCCSSEEEE--TTS-HH
T ss_pred eCCCCcHHHHcCcCCEEEE-cCCCHH
Confidence 9999999999999999999 998887
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.8e-06 Score=85.81 Aligned_cols=105 Identities=29% Similarity=0.303 Sum_probs=74.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.|+.|+++|+++.++||.....+..+++.+|+...-.. .+..+...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~g------------------------ 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSN--ELVFDEKG------------------------ 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEE--EEEEcCCC------------------------
Confidence 5789999999999999999999999999999999999997321100 00000000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEE
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVG 768 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIa 768 (826)
......+....+..|..+++.+.. ..++++++||+.+|++|++.||++++
T Consensus 134 --------------------------~~~p~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a 187 (201)
T TIGR01491 134 --------------------------FIQPDGIVRVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISIS 187 (201)
T ss_pred --------------------------eEecceeeEEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEE
Confidence 000011112345567666555433 45689999999999999999999999
Q ss_pred e
Q 003364 769 I 769 (826)
Q Consensus 769 m 769 (826)
+
T Consensus 188 ~ 188 (201)
T TIGR01491 188 L 188 (201)
T ss_pred E
Confidence 9
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.24 E-value=4.6e-06 Score=82.22 Aligned_cols=92 Identities=25% Similarity=0.275 Sum_probs=67.9
Q ss_pred CchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEE
Q 003364 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAF 695 (826)
Q Consensus 616 ~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 695 (826)
+++.+.|+.++++|++++|+||.+...+.++++.+|+.... ++..+. .
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~----v~~~~~-~--------------------------- 139 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN----VIGNEL-F--------------------------- 139 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG----EEEEEE-E---------------------------
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE----EEEEee-e---------------------------
Confidence 66669999999999999999999999999999999984321 000000 0
Q ss_pred EEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc-c--HHHHHHHh------hcCCCeEEEEcCCcccHHhHH
Q 003364 696 VVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS-Q--KAQLVELL------KSCDYRTLAIGDGGNDVRMIQ 761 (826)
Q Consensus 696 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~-~--K~~iv~~l------~~~~~~v~~iGDg~ND~~ml~ 761 (826)
+ ........++++. + |...++.+ +.....++++|||.||++|||
T Consensus 140 --~--------------------~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 140 --D--------------------NGGGIFTGRITGSNCGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp --C--------------------TTCCEEEEEEEEEEESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred --e--------------------cccceeeeeECCCCCCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 0 0012234455554 4 99999999 456789999999999999997
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.22 E-value=6.2e-06 Score=83.51 Aligned_cols=128 Identities=21% Similarity=0.321 Sum_probs=82.7
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+++|+++.++||.....+..+++.+|+....--...+.....
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~------------------------- 138 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS------------------------- 138 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC-------------------------
Confidence 4789999999999999999999999999999999999998421000000000000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEE-----eCcccHHHHHHHhhcC--CCeEEEEcCCcccHHhHHhCCc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-----VTPSQKAQLVELLKSC--DYRTLAIGDGGNDVRMIQKADI 765 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~-----~~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~ml~~A~v 765 (826)
| ...... .....|...++.+... .+++++|||+.||+.|.+.+++
T Consensus 139 ------g----------------------~~~g~~~~~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~ 190 (224)
T PLN02954 139 ------G----------------------EYAGFDENEPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGA 190 (224)
T ss_pred ------C----------------------cEECccCCCcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCC
Confidence 0 000000 1123477777666543 3679999999999999888544
Q ss_pred c--EEecCCc-hHHHHhhccccccchhcchh
Q 003364 766 G--VGISGRE-GLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 766 g--Iam~gn~-~~~~~~~Ad~v~~~~~~l~~ 793 (826)
. ++..+.. .+.....||+++.+.+.|..
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~ 221 (224)
T PLN02954 191 DLFIGYGGVQVREAVAAKADWFVTDFQDLIE 221 (224)
T ss_pred CEEEecCCCccCHHHHhcCCEEECCHHHHHH
Confidence 4 4442222 23334468999888776654
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.14 E-value=1e-05 Score=81.53 Aligned_cols=132 Identities=14% Similarity=0.169 Sum_probs=82.6
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.++.|+++|+++.++||-....+.++.+.+ +... . ++....
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~--~--i~~n~~-------------------------- 122 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKE--Q--IYCNGS-------------------------- 122 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcC--c--EEEeEE--------------------------
Confidence 68999999999999999999999999999999998887 5321 0 110000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEE--E-EeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAIC--C-RVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~--~-~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
..++... ......+.. + ......|..+++.++..++.++++|||.||++|.+.||+.++-
T Consensus 123 ---~~~~~~~--------------~~~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~ 185 (219)
T PRK09552 123 ---DFSGEYI--------------TITWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR 185 (219)
T ss_pred ---EecCCee--------------EEeccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH
Confidence 0000000 000000000 0 0011248899999988888999999999999999999996663
Q ss_pred cCCchHHHHh--hccccccchhcchh
Q 003364 770 SGREGLQAAR--AADYSIGKFRFLKR 793 (826)
Q Consensus 770 ~gn~~~~~~~--~Ad~v~~~~~~l~~ 793 (826)
+.-.+.+.+ .+.+...+|+.+..
T Consensus 186 -~~l~~~~~~~~~~~~~~~~f~ei~~ 210 (219)
T PRK09552 186 -DFLITKCEELGIPYTPFETFHDVQT 210 (219)
T ss_pred -HHHHHHHHHcCCCccccCCHHHHHH
Confidence 311111112 35555566655544
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.3e-05 Score=80.36 Aligned_cols=111 Identities=14% Similarity=0.173 Sum_probs=74.1
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
-+++|++.+.++.|++.|++++++||.....+.++++.++....-.... ...++...
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~-~~~~~~~~---------------------- 125 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNE-ADFSNEYI---------------------- 125 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEece-eEeeCCee----------------------
Confidence 3689999999999999999999999999988888888764321100000 00011000
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccc-eeEE-EEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSR-TAIC-CRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~-~~i~-~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
... ... .... ..-....|..+++.++..++.++++|||.||++|++.||+.+|=
T Consensus 126 ----~~~--------------------~p~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar 181 (214)
T TIGR03333 126 ----HID--------------------WPHPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFAR 181 (214)
T ss_pred ----EEe--------------------CCCCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEeh
Confidence 000 000 0000 00012369999999887788899999999999999999997764
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=98.12 E-value=5.2e-05 Score=80.83 Aligned_cols=189 Identities=14% Similarity=0.187 Sum_probs=101.1
Q ss_pred CcEEEEEEeecc--ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEE---------------
Q 003364 601 DLKVLGVTAIED--RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLS--------------- 663 (826)
Q Consensus 601 ~l~~lG~i~~~d--~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~--------------- 663 (826)
|.++.-+.---+ .+.++.++++++|.+. ..|+|+|||+...+.....-.++.--...|.-+.
T Consensus 127 DGTLaPIv~~Pd~A~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l~~~~l~laGsHG~e~~~p~~~~~~~~~~~~~ 205 (384)
T PLN02580 127 DGTLSPIVDDPDRALMSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELVGLTELYYAGSHGMDIMGPVRESVSNDHPNCI 205 (384)
T ss_pred CCccCCCCCCcccccCCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHhCCCCccEEEeCCceeecCCCCcccccccccc
Confidence 555554442111 3678999999999988 4899999999998887764433211111111000
Q ss_pred ----ecCCC------HHHHHHHHHHHHHHc-------ccccCCCCceEEEEcC-----hhHHHHHHHHHHH---Hhhhcc
Q 003364 664 ----IDGKT------EDEVCRSLERVLLTM-------RITTSEPKDVAFVVDG-----WALEIALKHYRKA---FTELAI 718 (826)
Q Consensus 664 ----~~~~~------~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~g-----~~~~~~~~~~~~~---~~~~~~ 718 (826)
..+.. ..+....+..+...+ .-..-+.+.+++.+.- .......+..... ++.+..
T Consensus 206 ~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~~~~~~l~~~l~~~~~l~v 285 (384)
T PLN02580 206 KSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPLVAQCVHDVLKKYPRLRL 285 (384)
T ss_pred cccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHHHHHHHHHHHHHhCCceEE
Confidence 00100 000000111111111 1111123344444322 1122222222222 222222
Q ss_pred ccceeEEEEeCcc---cHHHHHHHhhcCC----C-e--EEEEcCCcccHHhHHh-----CCccEEecCCchHHHHhhccc
Q 003364 719 LSRTAICCRVTPS---QKAQLVELLKSCD----Y-R--TLAIGDGGNDVRMIQK-----ADIGVGISGREGLQAARAADY 783 (826)
Q Consensus 719 ~~~~~i~~~~~p~---~K~~iv~~l~~~~----~-~--v~~iGDg~ND~~ml~~-----A~vgIam~gn~~~~~~~~Ad~ 783 (826)
....-..++.|. +|+..++.+.+.. . . +++|||+.||.+||+. +|+||+| +|+..+ -.|+|
T Consensus 286 -~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~V-gn~~~~--t~A~y 361 (384)
T PLN02580 286 -THGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILV-SSVPKE--SNAFY 361 (384)
T ss_pred -EeCCeEEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEE-ecCCCC--ccceE
Confidence 223355788883 7999888876531 2 2 4899999999999996 6999999 775422 26788
Q ss_pred cccchhcchhh
Q 003364 784 SIGKFRFLKRL 794 (826)
Q Consensus 784 v~~~~~~l~~l 794 (826)
.+.+-.++..+
T Consensus 362 ~L~dp~eV~~~ 372 (384)
T PLN02580 362 SLRDPSEVMEF 372 (384)
T ss_pred EcCCHHHHHHH
Confidence 88766665553
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.09 E-value=9e-06 Score=81.83 Aligned_cols=126 Identities=23% Similarity=0.233 Sum_probs=90.4
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCC
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (826)
...+-|++++++..|+++|++..++|+++...+..+.+..|+...-.. ++. +.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~--i~g--~~----------------------- 139 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDV--IVG--GD----------------------- 139 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccce--EEc--CC-----------------------
Confidence 446789999999999999999999999999999999999998544221 000 00
Q ss_pred CceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCC---ccE
Q 003364 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKAD---IGV 767 (826)
Q Consensus 691 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~---vgI 767 (826)
.....+-.|.....+++.++..+++++||||+.+|+.|=+.|| +||
T Consensus 140 -------------------------------~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v 188 (220)
T COG0546 140 -------------------------------DVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGV 188 (220)
T ss_pred -------------------------------CCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEE
Confidence 0000011333455677777766568999999999999999999 556
Q ss_pred EecCCchHHHHh-hccccccchhcchhh
Q 003364 768 GISGREGLQAAR-AADYSIGKFRFLKRL 794 (826)
Q Consensus 768 am~gn~~~~~~~-~Ad~v~~~~~~l~~l 794 (826)
..+.+..+.... .+|+++.+...|...
T Consensus 189 ~~g~~~~~~l~~~~~d~vi~~~~el~~~ 216 (220)
T COG0546 189 TWGYNSREELAQAGADVVIDSLAELLAL 216 (220)
T ss_pred ECCCCCCcchhhcCCCEEECCHHHHHHH
Confidence 662233444555 699999888776553
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.7e-05 Score=78.83 Aligned_cols=107 Identities=14% Similarity=0.043 Sum_probs=73.7
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEE-ecCCCHHHHHHHHHHHHHHcccccCC
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLS-IDGKTEDEVCRSLERVLLTMRITTSE 689 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (826)
...+.+++.+.++.++++|++++++||.+...+..+++.+|+...-.. .+.. .+|.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~-~l~~~~~g~---------------------- 141 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGT-RLEESEDGI---------------------- 141 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEec-ceEEcCCCE----------------------
Confidence 446889999999999999999999999999999999999998432100 0000 0000
Q ss_pred CCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCc
Q 003364 690 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADI 765 (826)
Q Consensus 690 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~v 765 (826)
.+|. ...-.+....|...++.+.. ..+.++++||+.+|++|++.||.
T Consensus 142 -------~~g~----------------------~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~ 192 (202)
T TIGR01490 142 -------YTGN----------------------IDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGH 192 (202)
T ss_pred -------EeCC----------------------ccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCC
Confidence 0000 00001234567766665433 24579999999999999999999
Q ss_pred cEEe
Q 003364 766 GVGI 769 (826)
Q Consensus 766 gIam 769 (826)
++++
T Consensus 193 ~~~v 196 (202)
T TIGR01490 193 PYVV 196 (202)
T ss_pred cEEe
Confidence 9998
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=98.02 E-value=2.6e-05 Score=79.85 Aligned_cols=70 Identities=16% Similarity=0.180 Sum_probs=51.2
Q ss_pred eeEEEEeCcc--cHHHHHHHhhcC----CCeEEEEcCCcccHHhHHhC--------CccEEecCCchHHHHhhccccccc
Q 003364 722 TAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKA--------DIGVGISGREGLQAARAADYSIGK 787 (826)
Q Consensus 722 ~~i~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A--------~vgIam~gn~~~~~~~~Ad~v~~~ 787 (826)
...+.++.|. +|+..++.+... ...++++||+.||.+|++.+ ++||+| +.+ ..+..|++++++
T Consensus 155 g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v-~~g--~~~~~A~~~~~~ 231 (244)
T TIGR00685 155 GKAVVELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPI-GSG--SKKTVAKFHLTG 231 (244)
T ss_pred CCeEEEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEE-ecC--CcCCCceEeCCC
Confidence 3445566665 799877776543 46899999999999999999 578888 422 245579999988
Q ss_pred hhcchhh
Q 003364 788 FRFLKRL 794 (826)
Q Consensus 788 ~~~l~~l 794 (826)
...+..+
T Consensus 232 ~~~v~~~ 238 (244)
T TIGR00685 232 PQQVLEF 238 (244)
T ss_pred HHHHHHH
Confidence 7766543
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.6e-05 Score=77.25 Aligned_cols=40 Identities=23% Similarity=0.250 Sum_probs=37.6
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~ 653 (826)
+++++.+.++.++++|++++++||.....+..++..+|+.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 5799999999999999999999999999999999999974
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.98 E-value=2.7e-05 Score=78.12 Aligned_cols=117 Identities=17% Similarity=0.135 Sum_probs=82.4
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+++|++++++|+.+...+..+.+..|+....+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----------------------------------- 129 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFS----------------------------------- 129 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCc-----------------------------------
Confidence 578999999999999999999999999999999999988733211
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEe----Cc--ccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV----TP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
..+..+- .| .-=..+++.++...+++++|||+.+|++|.+.||+.
T Consensus 130 -----------------------------~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~ 180 (213)
T TIGR01449 130 -----------------------------VLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCP 180 (213)
T ss_pred -----------------------------EEEecCCCCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCe
Confidence 0011111 11 111345666666678899999999999999999986
Q ss_pred EEec--CC-chHHHH-hhccccccchhcchh
Q 003364 767 VGIS--GR-EGLQAA-RAADYSIGKFRFLKR 793 (826)
Q Consensus 767 Iam~--gn-~~~~~~-~~Ad~v~~~~~~l~~ 793 (826)
.... |. ...... ..||+++.+...+..
T Consensus 181 ~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~ 211 (213)
T TIGR01449 181 SVLLTYGYRYGEAIDLLPPDVLYDSLNELPP 211 (213)
T ss_pred EEEEccCCCCCcchhhcCCCeEeCCHHHHHh
Confidence 5431 22 122333 368888887766644
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=2.3e-05 Score=79.46 Aligned_cols=123 Identities=24% Similarity=0.281 Sum_probs=85.0
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
.++.|++.++++.|+++|++++++||.....+....+..|+...... ++
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--~~----------------------------- 140 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSV--VI----------------------------- 140 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccE--EE-----------------------------
Confidence 45789999999999999999999999999999999999987432110 00
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCc--ccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCc-cEE
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVG 768 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v-gIa 768 (826)
....+ ....| .--..+++.++...+++++|||+.+|++|.+.||+ +|.
T Consensus 141 ----------------------------~~~~~-~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~ 191 (226)
T PRK13222 141 ----------------------------GGDSL-PNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVG 191 (226)
T ss_pred ----------------------------cCCCC-CCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEE
Confidence 00000 01111 11234666666677899999999999999999998 555
Q ss_pred ec-CCc-hHHHH-hhccccccchhcchhh
Q 003364 769 IS-GRE-GLQAA-RAADYSIGKFRFLKRL 794 (826)
Q Consensus 769 m~-gn~-~~~~~-~~Ad~v~~~~~~l~~l 794 (826)
+. |.. ..+.. ..+++++.++..|..+
T Consensus 192 v~~g~~~~~~~~~~~~~~~i~~~~~l~~~ 220 (226)
T PRK13222 192 VTYGYNYGEPIALSEPDVVIDHFAELLPL 220 (226)
T ss_pred ECcCCCCccchhhcCCCEEECCHHHHHHH
Confidence 51 211 22333 3788888888777663
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.98 E-value=1.9e-05 Score=78.65 Aligned_cols=122 Identities=17% Similarity=0.217 Sum_probs=83.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.+++.++++.|+++|+++.++||.+...+....+..|+....+. ++.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~--i~~----------------------------- 123 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDH--VIG----------------------------- 123 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheee--EEe-----------------------------
Confidence 6789999999999999999999999999989888888887332110 000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeE-EEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEE-e-
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAI-CCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVG-I- 769 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIa-m- 769 (826)
.... ..+-.|.-=..+++.++..++++++|||+.+|+.+-+.+|+... +
T Consensus 124 ----------------------------~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~ 175 (205)
T TIGR01454 124 ----------------------------SDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAAL 175 (205)
T ss_pred ----------------------------cCcCCCCCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEE
Confidence 0000 00001111235666666667889999999999999999998643 2
Q ss_pred cCC-chHHHH-hhccccccchhcchh
Q 003364 770 SGR-EGLQAA-RAADYSIGKFRFLKR 793 (826)
Q Consensus 770 ~gn-~~~~~~-~~Ad~v~~~~~~l~~ 793 (826)
.|. ...++. ..+|+++.+...|..
T Consensus 176 ~g~~~~~~l~~~~~~~~~~~~~~l~~ 201 (205)
T TIGR01454 176 WGEGDAGELLAARPDFLLRKPQSLLA 201 (205)
T ss_pred ecCCChhhhhhcCCCeeeCCHHHHHH
Confidence 122 233343 478999888776654
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.9e-05 Score=72.70 Aligned_cols=43 Identities=21% Similarity=0.342 Sum_probs=39.7
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~ 653 (826)
..++.+++.+.+++|+++|++++++||+....+...++.+|+.
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 3478999999999999999999999999999999999999874
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.92 E-value=3.7e-05 Score=75.44 Aligned_cols=113 Identities=17% Similarity=0.205 Sum_probs=74.7
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
-++.+++.+.++.|++.|+++.++|+.+...+..+.+..|+....+. ++. +....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--i~~-~~~~~---------------------- 125 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIE--IYS-NPASF---------------------- 125 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeE--Eec-cCceE----------------------
Confidence 47889999999999999999999999999999999998887432110 110 00000
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccc-eeEEEEe-CcccHHHHHHHhhcC-CCeEEEEcCCcccHHhHHhCCccEE
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSR-TAICCRV-TPSQKAQLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGVG 768 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~-~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~vgIa 768 (826)
++.. .+..... ...+... ....|..+++.++.. .+.++++|||.||++|.+.||+-.|
T Consensus 126 ------~~~g-------------~~~~~~~~~~~~~~~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 126 ------DNDG-------------RHIVWPHHCHGCCSCPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred ------CCCC-------------cEEEecCCCCccCcCCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 0000 0000000 0011111 112588999998877 8899999999999999999987544
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=4.5e-05 Score=79.32 Aligned_cols=119 Identities=20% Similarity=0.233 Sum_probs=83.0
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
.++.|++.++|+.|+++|++++++||.+...+..+....|+....+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~---------------------------------- 145 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFR---------------------------------- 145 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCe----------------------------------
Confidence 3678999999999999999999999999988888888888622110
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccH------HHHHHHhhcCCCeEEEEcCCcccHHhHHhCCc
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK------AQLVELLKSCDYRTLAIGDGGNDVRMIQKADI 765 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K------~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v 765 (826)
..+..+..+..| ..+++.++...+.+++|||+.||++|-+.||+
T Consensus 146 ------------------------------~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi 195 (272)
T PRK13223 146 ------------------------------WIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGV 195 (272)
T ss_pred ------------------------------EEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCC
Confidence 111111122222 24555555567899999999999999999997
Q ss_pred c-EEec-C-CchHHHHh-hccccccchhcchhh
Q 003364 766 G-VGIS-G-REGLQAAR-AADYSIGKFRFLKRL 794 (826)
Q Consensus 766 g-Iam~-g-n~~~~~~~-~Ad~v~~~~~~l~~l 794 (826)
. +++. | +...+... .+|+++.+...|..+
T Consensus 196 ~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~ 228 (272)
T PRK13223 196 QCVALSYGYNHGRPIAEESPALVIDDLRALLPG 228 (272)
T ss_pred eEEEEecCCCCchhhhhcCCCEEECCHHHHHHH
Confidence 3 4441 2 22333343 789998877766554
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=4.9e-05 Score=76.80 Aligned_cols=123 Identities=12% Similarity=0.075 Sum_probs=82.7
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
-++.|++.++|+.|+++|++++++||.....+..+.+..|+...-+. ++
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--~~----------------------------- 139 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDA--LA----------------------------- 139 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccE--EE-----------------------------
Confidence 46789999999999999999999999999999999999887432210 00
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeE-EEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEec
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAI-CCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~ 770 (826)
. ...+ ..+-.|.-=..+++.++...+++++|||+.+|+++-+.||+.....
T Consensus 140 ------~----------------------~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v 191 (222)
T PRK10826 140 ------S----------------------AEKLPYSKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVV 191 (222)
T ss_pred ------E----------------------cccCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEe
Confidence 0 0000 0000111112455556556788999999999999999999876442
Q ss_pred CC--chHHH-Hhhccccccchhcchh
Q 003364 771 GR--EGLQA-ARAADYSIGKFRFLKR 793 (826)
Q Consensus 771 gn--~~~~~-~~~Ad~v~~~~~~l~~ 793 (826)
.. ...+. ...||+++.++..+..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~dl~~ 217 (222)
T PRK10826 192 PAPEQQNDPRWALADVKLESLTELTA 217 (222)
T ss_pred cCCccCchhhhhhhheeccCHHHHhh
Confidence 22 12222 2368888888776644
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=5.2e-05 Score=76.10 Aligned_cols=123 Identities=17% Similarity=0.116 Sum_probs=82.6
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+++|+++.++||.....+....+..|+....+. ++.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~--i~~----------------------------- 130 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDV--VIT----------------------------- 130 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeE--EEe-----------------------------
Confidence 3679999999999999999999999999999999999987432110 000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEE-e-c
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVG-I-S 770 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIa-m-~ 770 (826)
.+ ..-...-.|.--..+++.++...+++++|||+.+|+.+-+.||+-.. + .
T Consensus 131 ------~~---------------------~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~ 183 (214)
T PRK13288 131 ------LD---------------------DVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAW 183 (214)
T ss_pred ------cC---------------------cCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcC
Confidence 00 00000111222235666666667889999999999999999998432 2 1
Q ss_pred CC-chHHHHh-hccccccchhcchh
Q 003364 771 GR-EGLQAAR-AADYSIGKFRFLKR 793 (826)
Q Consensus 771 gn-~~~~~~~-~Ad~v~~~~~~l~~ 793 (826)
|- ...++.+ .+|+++.++..+..
T Consensus 184 g~~~~~~l~~~~~~~~i~~~~~l~~ 208 (214)
T PRK13288 184 TIKGREYLEQYKPDFMLDKMSDLLA 208 (214)
T ss_pred CCCCHHHHhhcCcCEEECCHHHHHH
Confidence 32 2233433 58888887776655
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00025 Score=84.55 Aligned_cols=188 Identities=19% Similarity=0.221 Sum_probs=100.3
Q ss_pred CcEEEEEEeeccccCCchHHHHHHH-HHcCCeEEEEcCCChhHHHHHHHHcC-CCCCCCCCcEEEecCCCH--------H
Q 003364 601 DLKVLGVTAIEDRLQDGVPETIETL-RKAGINFWMLTGDKQNTAIQIALSCN-FISPEPKGQLLSIDGKTE--------D 670 (826)
Q Consensus 601 ~l~~lG~i~~~d~l~~~~~~aI~~l-~~~Gi~v~i~TGd~~~~a~~~a~~~g-i~~~~~~~~~~~~~~~~~--------~ 670 (826)
|.+++-.-.....+.+++.+++++| ++.|+.|+++|||+..+.......+. +.--..+|..+...+... +
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~ 683 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVAD 683 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhh
Confidence 4444433222335678999999997 78899999999999999988875442 211122333333222210 1
Q ss_pred HHHH-HHHHHHHHccc----ccCCCCceEEEEcChh----H-----HHHHHHHHHHHhhh-ccccceeEEEEeCcc--cH
Q 003364 671 EVCR-SLERVLLTMRI----TTSEPKDVAFVVDGWA----L-----EIALKHYRKAFTEL-AILSRTAICCRVTPS--QK 733 (826)
Q Consensus 671 ~~~~-~~~~~~~~~~~----~~~~~~~~~l~~~g~~----~-----~~~~~~~~~~~~~~-~~~~~~~i~~~~~p~--~K 733 (826)
.... ........... ..-+.+...++..-.. + +.....+...+... ..+.......++.|. +|
T Consensus 684 ~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnK 763 (854)
T PLN02205 684 CSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSK 763 (854)
T ss_pred HHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCH
Confidence 1111 11111111100 0111233444432211 1 11222222222211 122234456788887 69
Q ss_pred HHHHHHhhc-------CCCeEEEEcCCcccHHhHHhCC--------------ccEEecCCchHHHHhhccccccchhcch
Q 003364 734 AQLVELLKS-------CDYRTLAIGDGGNDVRMIQKAD--------------IGVGISGREGLQAARAADYSIGKFRFLK 792 (826)
Q Consensus 734 ~~iv~~l~~-------~~~~v~~iGDg~ND~~ml~~A~--------------vgIam~gn~~~~~~~~Ad~v~~~~~~l~ 792 (826)
+..++.+.. ..+.+++|||+.||.+||+.++ ++|.+ |... ..|.|-+.+-.++.
T Consensus 764 G~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~V-G~~~----S~A~y~L~d~~eV~ 838 (854)
T PLN02205 764 GLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTV-GQKP----SKAKYYLDDTAEIV 838 (854)
T ss_pred HHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEE-CCCC----ccCeEecCCHHHHH
Confidence 998888742 3468999999999999999886 45566 5432 25566665555544
Q ss_pred h
Q 003364 793 R 793 (826)
Q Consensus 793 ~ 793 (826)
.
T Consensus 839 ~ 839 (854)
T PLN02205 839 R 839 (854)
T ss_pred H
Confidence 4
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00015 Score=74.68 Aligned_cols=122 Identities=15% Similarity=0.177 Sum_probs=83.0
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.+++.++++.|+++|+++.++|+.+...+..+.+.+|+....+. ++.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~--ii~----------------------------- 157 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSV--VLA----------------------------- 157 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcE--EEe-----------------------------
Confidence 4689999999999999999999999999999999999987432110 000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEE-EEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE-Eec
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAIC-CRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GIS 770 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI-am~ 770 (826)
+ ..+. ..-.|.-=..+++.++...+++++|||+.+|+.+=+.||+-. ++.
T Consensus 158 ------~----------------------~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~ 209 (260)
T PLN03243 158 ------A----------------------EDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVA 209 (260)
T ss_pred ------c----------------------ccCCCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEe
Confidence 0 0000 000111113566667767788999999999999999999844 443
Q ss_pred CCchHHHHhhccccccchhcchh
Q 003364 771 GREGLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 771 gn~~~~~~~~Ad~v~~~~~~l~~ 793 (826)
+.........+|+++.++..+..
T Consensus 210 g~~~~~~l~~ad~vi~~~~el~~ 232 (260)
T PLN03243 210 GKHPVYELSAGDLVVRRLDDLSV 232 (260)
T ss_pred cCCchhhhccCCEEeCCHHHHHH
Confidence 33222222357888877766644
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00018 Score=72.89 Aligned_cols=124 Identities=19% Similarity=0.144 Sum_probs=83.3
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.++.|+++|+++.++|+.+...+..+.+..|+..... ++
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~---~i------------------------------ 141 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCA---VL------------------------------ 141 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhccc---EE------------------------------
Confidence 578999999999999999999999999888888888888732110 00
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEE-e-c
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVG-I-S 770 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIa-m-~ 770 (826)
+.+. .....+-.|.-=..+++.++..++++++|||+.+|+.|-+.||+... + .
T Consensus 142 ----~~~~---------------------~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~ 196 (229)
T PRK13226 142 ----IGGD---------------------TLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALW 196 (229)
T ss_pred ----EecC---------------------cCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEee
Confidence 0000 00000111111235677777778899999999999999999998652 2 1
Q ss_pred CC--chHHHH-hhccccccchhcchhh
Q 003364 771 GR--EGLQAA-RAADYSIGKFRFLKRL 794 (826)
Q Consensus 771 gn--~~~~~~-~~Ad~v~~~~~~l~~l 794 (826)
|. ..+... ..+|+++.+...|..+
T Consensus 197 g~~~~~~~~~~~~~~~~i~~~~el~~~ 223 (229)
T PRK13226 197 GYRLHDDDPLAWQADVLVEQPQLLWNP 223 (229)
T ss_pred cCCCCCcChhhcCCCeeeCCHHHHHHH
Confidence 21 112232 3689999888777653
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00021 Score=73.78 Aligned_cols=124 Identities=19% Similarity=0.157 Sum_probs=82.7
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.|+.|+++|+++.++||.+...+..+.+..|+...... .++
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d-~ii------------------------------ 147 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPD-YNV------------------------------ 147 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCc-eEE------------------------------
Confidence 4679999999999999999999999999999998888887432100 000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEE-EEeCcccHHHHHHHhhcC-CCeEEEEcCCcccHHhHHhCCccE-Ee
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAIC-CRVTPSQKAQLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGV-GI 769 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~vgI-am 769 (826)
.+ ..+. ..-.|.-=..+++.+... .+++++|||+.+|+.+=+.||+.. ++
T Consensus 148 -----~~----------------------~~~~~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v 200 (253)
T TIGR01422 148 -----TT----------------------DDVPAGRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGL 200 (253)
T ss_pred -----cc----------------------ccCCCCCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEE
Confidence 00 0000 001111123456666653 678999999999999999999644 22
Q ss_pred -cCCc------------------------hHHHHh-hccccccchhcchhh
Q 003364 770 -SGRE------------------------GLQAAR-AADYSIGKFRFLKRL 794 (826)
Q Consensus 770 -~gn~------------------------~~~~~~-~Ad~v~~~~~~l~~l 794 (826)
.|.. ..++.. -+|++++++..+..+
T Consensus 201 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~el~~~ 251 (253)
T TIGR01422 201 ILSSNELGLSEEEYRALDPAELEARRAEATARLKAAGAHYVIDTLAELPAV 251 (253)
T ss_pred ecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCCEehhcHHHHHHh
Confidence 1321 234444 589999888776553
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00025 Score=79.09 Aligned_cols=92 Identities=15% Similarity=0.190 Sum_probs=69.0
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
+++|++.+.+++++++|++++++|+.+...+..+++.+|+... ++..++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-----Vigsd~~------------------------- 121 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-----VFASDGT------------------------- 121 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-----EEeCCCc-------------------------
Confidence 4779999999999999999999999999999999999997211 1111100
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHH-HhhcCCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVE-LLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~-~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
.+..|+.|...+. .+.+ +.+.++||+.+|++|++.|+-.+++
T Consensus 122 ---------------------------------~~~kg~~K~~~l~~~l~~--~~~~yvGDS~~Dlp~~~~A~~av~V 164 (479)
T PRK08238 122 ---------------------------------TNLKGAAKAAALVEAFGE--RGFDYAGNSAADLPVWAAARRAIVV 164 (479)
T ss_pred ---------------------------------cccCCchHHHHHHHHhCc--cCeeEecCCHHHHHHHHhCCCeEEE
Confidence 0234455655443 3332 3367889999999999999999999
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00037 Score=69.21 Aligned_cols=105 Identities=17% Similarity=0.183 Sum_probs=71.4
Q ss_pred ccCCchHHHHH-HHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 613 RLQDGVPETIE-TLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 613 ~l~~~~~~aI~-~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
.+.|++.++|+ .++++|++++++|+-+...+.++++..++..... ++..+ .+.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~---~i~t~-le~---------------------- 147 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN---LIASQ-IER---------------------- 147 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc---EEEEE-eEE----------------------
Confidence 46899999996 7888999999999999999999998866533211 11100 000
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHH-hhcCCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVEL-LKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~-l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
.+| .......+.-+.|..-++. +....+...+-||+.||.|||+.||.++++
T Consensus 148 -----~~g---------------------g~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~V 200 (210)
T TIGR01545 148 -----GNG---------------------GWVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRV 200 (210)
T ss_pred -----eCC---------------------ceEcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEE
Confidence 000 0001112334568775654 443445668999999999999999999999
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0003 Score=72.94 Aligned_cols=116 Identities=16% Similarity=0.127 Sum_probs=81.5
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+++|+++.++|+.....+....+..|+...-+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~---------------------------------- 187 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSV---------------------------------- 187 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEE----------------------------------
Confidence 5679999999999999999999999999999999999997332110
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccH----HHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEE
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK----AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVG 768 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K----~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIa 768 (826)
+ +..+..+ .| ..+++.++..++++++|||+.+|+.+-+.||+-..
T Consensus 188 ---v---------------------------i~~~~~~-~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I 236 (273)
T PRK13225 188 ---V---------------------------QAGTPIL-SKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAV 236 (273)
T ss_pred ---E---------------------------EecCCCC-CCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEE
Confidence 0 0000000 12 23444555556789999999999999999997543
Q ss_pred e--cC-CchHHHHh-hccccccchhcchh
Q 003364 769 I--SG-REGLQAAR-AADYSIGKFRFLKR 793 (826)
Q Consensus 769 m--~g-n~~~~~~~-~Ad~v~~~~~~l~~ 793 (826)
. .| +...++.. .||+++.+...|..
T Consensus 237 ~v~~g~~~~~~l~~~~ad~~i~~~~eL~~ 265 (273)
T PRK13225 237 AVTWGFNDRQSLVAACPDWLLETPSDLLQ 265 (273)
T ss_pred EEecCCCCHHHHHHCCCCEEECCHHHHHH
Confidence 2 12 23333433 68999888777655
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00043 Score=69.16 Aligned_cols=105 Identities=14% Similarity=0.141 Sum_probs=71.6
Q ss_pred ccCCchHHHH-HHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 613 RLQDGVPETI-ETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 613 ~l~~~~~~aI-~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
.+.|++.+.| +.+++.|++++++|+.+...+.+++..+|+.... . ++..+-.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-~--~i~t~l~------------------------ 147 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-N--LIASQMQ------------------------ 147 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-c--eEEEEEE------------------------
Confidence 4579999999 5788899999999999999999999998852211 0 1111000
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHH-hhcCCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVEL-LKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~-l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
...+| ......+..+.|..-++. +........+-||+.||.|||+.|+.++++
T Consensus 148 ---~~~tg----------------------~~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~v 201 (211)
T PRK11590 148 ---RRYGG----------------------WVLTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRV 201 (211)
T ss_pred ---EEEcc----------------------EECCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEE
Confidence 00000 001112334568776654 444455678999999999999999999999
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0017 Score=68.68 Aligned_cols=190 Identities=14% Similarity=0.144 Sum_probs=103.7
Q ss_pred cCcEEEEEEeecc--ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCC----------
Q 003364 600 HDLKVLGVTAIED--RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK---------- 667 (826)
Q Consensus 600 ~~l~~lG~i~~~d--~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~---------- 667 (826)
-|.+++-+..-.+ .+.+++.++|++|. +|+.++++|||+...+..+..-.++.--..+|..+...+.
T Consensus 118 ~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~l~~l~l~g~hGa~i~~p~~~~~~~~~~~~ 196 (366)
T PLN03017 118 YDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQ 196 (366)
T ss_pred cCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhhcccCceEEEcCCcEEecCCCcceecccccc
Confidence 4777776665333 58899999999999 7899999999999999887432221111112222111000
Q ss_pred -----CHHHHHHHHHHHHHHc-------ccccCCCCceEEEEcCh-----hHHHHHHHHHH---HHhhhccccceeEEEE
Q 003364 668 -----TEDEVCRSLERVLLTM-------RITTSEPKDVAFVVDGW-----ALEIALKHYRK---AFTELAILSRTAICCR 727 (826)
Q Consensus 668 -----~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~g~-----~~~~~~~~~~~---~~~~~~~~~~~~i~~~ 727 (826)
...+....+......+ .-..-+.+.+++.+... ....+...... .++.+. +.....-.+
T Consensus 197 ~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~-v~~GkkVlE 275 (366)
T PLN03017 197 SLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLK-LTQGRKVFE 275 (366)
T ss_pred ccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcE-EeCCCeEEE
Confidence 0000001111111111 11111234445543322 11222222222 222222 223445568
Q ss_pred eCcc---cHHHHHHHhhcC-------CCeEEEEcCCcccHHhHHhC-----CccEEecCCchHHHHhhccccccchhcch
Q 003364 728 VTPS---QKAQLVELLKSC-------DYRTLAIGDGGNDVRMIQKA-----DIGVGISGREGLQAARAADYSIGKFRFLK 792 (826)
Q Consensus 728 ~~p~---~K~~iv~~l~~~-------~~~v~~iGDg~ND~~ml~~A-----~vgIam~gn~~~~~~~~Ad~v~~~~~~l~ 792 (826)
+.|. +|+.+++.|... ..-++++||...|-.||+.. |+||.+ |.... ...|+|.+.+-....
T Consensus 276 vRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~V-G~~~k--~T~A~y~L~dp~eV~ 352 (366)
T PLN03017 276 IRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILV-SKFPK--DTDASYSLQDPSEVM 352 (366)
T ss_pred ecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEE-CCCCC--CCcceEeCCCHHHHH
Confidence 8773 899999988753 23589999999999999976 467777 53211 236888887666555
Q ss_pred hh
Q 003364 793 RL 794 (826)
Q Consensus 793 ~l 794 (826)
.+
T Consensus 353 ~f 354 (366)
T PLN03017 353 DF 354 (366)
T ss_pred HH
Confidence 54
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00033 Score=70.66 Aligned_cols=123 Identities=20% Similarity=0.239 Sum_probs=81.7
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC--CCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI--SPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE 689 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (826)
.++.+++.+.++.|+++|+++.++||.....+....+..|+. ...+. ++ .
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~--i~-~------------------------- 137 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDA--VV-C------------------------- 137 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCE--EE-c-------------------------
Confidence 378899999999999999999999999999999999988874 21110 00 0
Q ss_pred CCceEEEEcChhHHHHHHHHHHHHhhhccccceeEE-EEeCcccHHHHHHHhhcC-CCeEEEEcCCcccHHhHHhCCccE
Q 003364 690 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAIC-CRVTPSQKAQLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGV 767 (826)
Q Consensus 690 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~vgI 767 (826)
. .... .+-.|.-=..+++.+... ++++++|||+.+|+.+-+.||+..
T Consensus 138 ---------~----------------------~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 138 ---------P----------------------SDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred ---------C----------------------CcCCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence 0 0000 001111112445555554 578999999999999999999986
Q ss_pred --Ee-cC-CchHHHHh-hccccccchhcchh
Q 003364 768 --GI-SG-REGLQAAR-AADYSIGKFRFLKR 793 (826)
Q Consensus 768 --am-~g-n~~~~~~~-~Ad~v~~~~~~l~~ 793 (826)
++ .| +....... .+++++.++..+..
T Consensus 187 ~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~ 217 (220)
T TIGR03351 187 VVGVLTGAHDAEELSRHPHTHVLDSVADLPA 217 (220)
T ss_pred EEEEecCCCcHHHHhhcCCceeecCHHHHHH
Confidence 23 12 22233333 57888777666544
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00055 Score=64.41 Aligned_cols=39 Identities=18% Similarity=0.212 Sum_probs=34.3
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHH---HHHHH
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAI---QIALS 649 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~---~~a~~ 649 (826)
++.+.+++.+++++++++|++++++|||+...+. ....+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 4688999999999999999999999999998875 55555
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00047 Score=70.79 Aligned_cols=114 Identities=12% Similarity=0.071 Sum_probs=82.3
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+++|+++.++|+.+...+....+.+|+....+.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~---------------------------------- 153 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQA---------------------------------- 153 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcE----------------------------------
Confidence 4679999999999999999999999999999999999998432211
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEE------eCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR------VTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~------~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
.++++ -.|.-=..+++.++..++++++|||+.+|+.+=+.||+-
T Consensus 154 ------------------------------iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~ 203 (248)
T PLN02770 154 ------------------------------VIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMP 203 (248)
T ss_pred ------------------------------EEecCcCCCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCE
Confidence 11111 112222456677776778899999999999999999975
Q ss_pred EEe--cCCchHHHHh-hccccccchhc
Q 003364 767 VGI--SGREGLQAAR-AADYSIGKFRF 790 (826)
Q Consensus 767 Iam--~gn~~~~~~~-~Ad~v~~~~~~ 790 (826)
... .+....++.. .+|+++.++..
T Consensus 204 ~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 204 VVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred EEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 432 1333333433 68888877765
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00053 Score=71.33 Aligned_cols=41 Identities=24% Similarity=0.174 Sum_probs=36.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~ 653 (826)
.+-|++.++|+.|+++|+++.++||.+...+..+.+..|+.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 46799999999999999999999999998888887777653
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=97.46 E-value=5.5e-05 Score=59.24 Aligned_cols=47 Identities=19% Similarity=0.195 Sum_probs=39.9
Q ss_pred CCccccccCCCceEEeec-ccccccccHHHHHHhhhHHHHHHHHHHHHhhcc
Q 003364 9 DDETSQDLYCANRLSNRK-YTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWS 59 (826)
Q Consensus 9 ~~~~r~~~~g~N~i~~~~-~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~ 59 (826)
+.++|+++||+|+++.++ .++| ..++++|.+|++++++++++++++.
T Consensus 15 ~v~~r~~~~G~N~l~~~~~~s~~----~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 15 EAARRLERYGPNELPPPKKRSPL----LRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred HHHHHHHHhCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 446799999999999986 5566 8899999999998888888888753
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00056 Score=68.78 Aligned_cols=120 Identities=13% Similarity=0.097 Sum_probs=78.4
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++|+.|+++|+++.++|+.+...+....+..|+... . .++
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~-~--~i~------------------------------ 129 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP-E--VFV------------------------------ 129 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-c--EEE------------------------------
Confidence 5679999999999999999999999987776666666665211 0 000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc-EEecC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VGISG 771 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg-Iam~g 771 (826)
.++. .....-.|.-=..+++.++..++++++|||+.+|+.+=+.||+. |++ .
T Consensus 130 -----~~~~---------------------~~~~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v-~ 182 (218)
T PRK11587 130 -----TAER---------------------VKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAV-N 182 (218)
T ss_pred -----EHHH---------------------hcCCCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEE-C
Confidence 0000 00001122222355666777789999999999999999999984 555 3
Q ss_pred CchH-HHHhhccccccchhcch
Q 003364 772 REGL-QAARAADYSIGKFRFLK 792 (826)
Q Consensus 772 n~~~-~~~~~Ad~v~~~~~~l~ 792 (826)
+... .....+|+++.++..|.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~el~ 204 (218)
T PRK11587 183 APADTPRLDEVDLVLHSLEQLT 204 (218)
T ss_pred CCCchhhhccCCEEecchhhee
Confidence 3222 22236788887766553
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00059 Score=65.62 Aligned_cols=60 Identities=18% Similarity=0.052 Sum_probs=40.6
Q ss_pred HHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEe--cCCchH-------HHH-hhccccccchhcchh
Q 003364 734 AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI--SGREGL-------QAA-RAADYSIGKFRFLKR 793 (826)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam--~gn~~~-------~~~-~~Ad~v~~~~~~l~~ 793 (826)
..+++.++...+++++|||+.+|+.+=+.||+-... .|.... ++. ..+++++.++..+..
T Consensus 100 ~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~ 169 (173)
T PRK06769 100 LQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVN 169 (173)
T ss_pred HHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHH
Confidence 356666666678999999999999999999975533 122211 122 247777777666654
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00065 Score=72.73 Aligned_cols=117 Identities=16% Similarity=0.128 Sum_probs=82.8
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.+++.+.++.|+++|+++.++|+.+...+..+.+..|+....+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd----------------------------------- 260 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFS----------------------------------- 260 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHce-----------------------------------
Confidence 467999999999999999999999999999999999999833211
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEe----Ccc--cHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV----TPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
..+.++- -|. -=..+++.++..++++++|||+.+|+.+-+.||+-
T Consensus 261 -----------------------------~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~ 311 (381)
T PLN02575 261 -----------------------------VIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMK 311 (381)
T ss_pred -----------------------------EEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCE
Confidence 0111111 111 11356667776788999999999999999999975
Q ss_pred EEecCCchHHH-Hhhccccccchhcchh
Q 003364 767 VGISGREGLQA-ARAADYSIGKFRFLKR 793 (826)
Q Consensus 767 Iam~gn~~~~~-~~~Ad~v~~~~~~l~~ 793 (826)
........... ...||+++.+++.|..
T Consensus 312 ~IgV~~~~~~~~l~~Ad~iI~s~~EL~~ 339 (381)
T PLN02575 312 CVAVASKHPIYELGAADLVVRRLDELSI 339 (381)
T ss_pred EEEECCCCChhHhcCCCEEECCHHHHHH
Confidence 53313322111 1258888888777643
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0011 Score=66.85 Aligned_cols=90 Identities=16% Similarity=0.068 Sum_probs=66.9
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.|++.+.++.|+++|+++.++|+-+...+....+..|+....+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd----------------------------------- 137 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLD----------------------------------- 137 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCC-----------------------------------
Confidence 578999999999999999999999988888888777788632111
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccH------HHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK------AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K------~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
..+..+-....| ..+++.++..++++++|||+.+|+.+=+.||+.
T Consensus 138 -----------------------------~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 138 -----------------------------LLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIR 188 (224)
T ss_pred -----------------------------EEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCe
Confidence 111112111122 345566666678899999999999999999995
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=97.25 E-value=7e-05 Score=59.58 Aligned_cols=43 Identities=26% Similarity=0.309 Sum_probs=35.9
Q ss_pred CccccccCCCceEEeecc-cccccccHHHHHHhhhHHHHHHHHHHHHh
Q 003364 10 DETSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQ 56 (826)
Q Consensus 10 ~~~r~~~~g~N~i~~~~~-~~~~~l~~~l~~~~~~~~n~~~l~~~~l~ 56 (826)
.++|+++||+|+++.++. ++| ..|+++|.+|++++++++++++
T Consensus 26 v~~r~~~~G~N~l~~~~~~s~~----~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 26 VEERRKKYGPNELPEPKKKSLW----RIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HHHHHHHHSSSSTTTTTSSSHH----HHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHHHhcccccccccccCcHH----HHHHHHHHhHHHHHHHHHHHHC
Confidence 356999999999976655 556 8999999999998888888775
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0012 Score=66.46 Aligned_cols=97 Identities=15% Similarity=0.126 Sum_probs=67.9
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+++|++++++|+.+...+....+.+|+...-+. ++.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~--i~~----------------------------- 142 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDA--VIT----------------------------- 142 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccE--EEE-----------------------------
Confidence 5789999999999999999999999998888888888887322110 000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhcCCCeEEEEcCCc-ccHHhHHhCCcc-EE
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIG-VG 768 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~vg-Ia 768 (826)
...+ ...-|. -=..+++.++...+++++|||+. +|+.+=+.||+- |.
T Consensus 143 ----------------------------~~~~-~~~KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~ 193 (221)
T TIGR02253 143 ----------------------------SEEE-GVEKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVW 193 (221)
T ss_pred ----------------------------eccC-CCCCCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEE
Confidence 0000 001121 11345666666678899999997 999999999974 44
Q ss_pred e
Q 003364 769 I 769 (826)
Q Consensus 769 m 769 (826)
+
T Consensus 194 ~ 194 (221)
T TIGR02253 194 I 194 (221)
T ss_pred E
Confidence 4
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0033 Score=57.50 Aligned_cols=40 Identities=18% Similarity=0.269 Sum_probs=35.8
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCC--------hhHHHHHHHHcCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDK--------QNTAIQIALSCNF 652 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~--------~~~a~~~a~~~gi 652 (826)
++.+++.++++.|+++|++++++|+.+ ...+....+.+|+
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 678999999999999999999999998 6677778888876
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0013 Score=64.93 Aligned_cols=42 Identities=14% Similarity=0.125 Sum_probs=37.7
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~ 653 (826)
+++.+.+.++++.|+++|+++.++||.+...+..+.+..|+.
T Consensus 105 ~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 105 DETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred cccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 346677799999999999999999999999999999999984
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0023 Score=64.18 Aligned_cols=40 Identities=15% Similarity=0.227 Sum_probs=34.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCC----hhHHHHHHHHcCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDK----QNTAIQIALSCNF 652 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~----~~~a~~~a~~~gi 652 (826)
.+.+++++.++.++++|+++.++|||+ ..++..+.+..|+
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 466789999999999999999999986 4477777777887
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0017 Score=59.77 Aligned_cols=104 Identities=13% Similarity=0.216 Sum_probs=74.9
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcC----CCCCC--CCCcEEEecCCCHHHHHHHHHHHHHHcccc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCN----FISPE--PKGQLLSIDGKTEDEVCRSLERVLLTMRIT 686 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~g----i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (826)
.++|+-++.++.+++++++++++||-......++...++ |...+ ++..+++.+|.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~------------------- 133 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQ------------------- 133 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCc-------------------
Confidence 588999999999999999999999999988888887765 21110 00001111110
Q ss_pred cCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCc--ccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCC
Q 003364 687 TSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKAD 764 (826)
Q Consensus 687 ~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ 764 (826)
+..++-.=++ .+|...|+.+++..+.+.++|||+.|+++-+.+|
T Consensus 134 ----------------------------------h~i~~~~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsD 179 (220)
T COG4359 134 ----------------------------------HSIKYTDDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSD 179 (220)
T ss_pred ----------------------------------eeeecCCccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhh
Confidence 0111111122 3799999999999999999999999999999999
Q ss_pred ccEEe
Q 003364 765 IGVGI 769 (826)
Q Consensus 765 vgIam 769 (826)
+=.|=
T Consensus 180 llFAK 184 (220)
T COG4359 180 LLFAK 184 (220)
T ss_pred hHhhH
Confidence 87664
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0023 Score=63.33 Aligned_cols=95 Identities=16% Similarity=0.168 Sum_probs=68.0
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+++++|+++|++++++|+-+...+....+.+|+...-+. ++
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~--i~------------------------------ 139 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDA--VL------------------------------ 139 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhhe--eE------------------------------
Confidence 4679999999999999999999999999888888888887322110 00
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCccc--HHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQ--KAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~--K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI 767 (826)
....+. ..-|.. =..+++.++..++++++|||+.+|+.+-+.||+..
T Consensus 140 ---------------------------~s~~~~-~~KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 140 ---------------------------SADAVR-AYKPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred ---------------------------ehhhcC-CCCCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 000000 001211 13466667667889999999999999999999864
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0028 Score=66.35 Aligned_cols=123 Identities=13% Similarity=0.081 Sum_probs=77.4
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.++.|++.|+++.++|+.+...+..+.+..+.........++
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v------------------------------ 193 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF------------------------------ 193 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE------------------------------
Confidence 47799999999999999999999999888777766654321110000000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEec
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~ 770 (826)
.+ ..+ ..--|. -=..+++.++..++++++|||+.+|+.+-+.||+.+...
T Consensus 194 -----~~----------------------~~~-~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v 245 (286)
T PLN02779 194 -----AG----------------------DDV-PKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVT 245 (286)
T ss_pred -----ec----------------------ccc-CCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEE
Confidence 00 000 000111 113466666666788999999999999999999876442
Q ss_pred CC--chHHHHhhccccccchhcchh
Q 003364 771 GR--EGLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 771 gn--~~~~~~~~Ad~v~~~~~~l~~ 793 (826)
.. ...+....+|+++.++..+..
T Consensus 246 ~~g~~~~~~l~~ad~vi~~~~~l~~ 270 (286)
T PLN02779 246 KSSYTADEDFSGADAVFDCLGDVPL 270 (286)
T ss_pred ccCCccccccCCCcEEECChhhcch
Confidence 22 111111357888877766543
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0017 Score=65.33 Aligned_cols=39 Identities=13% Similarity=0.266 Sum_probs=34.3
Q ss_pred CCchHHHHHHHHHcCCeEEEEcCC----ChhHHHHHHHHcCCC
Q 003364 615 QDGVPETIETLRKAGINFWMLTGD----KQNTAIQIALSCNFI 653 (826)
Q Consensus 615 ~~~~~~aI~~l~~~Gi~v~i~TGd----~~~~a~~~a~~~gi~ 653 (826)
.+.+++.++.++++|+++.++|+| ...++..+.+.+|+.
T Consensus 116 ~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 116 KEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred hhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 344999999999999999999999 667888898889983
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0021 Score=72.51 Aligned_cols=121 Identities=13% Similarity=0.107 Sum_probs=79.0
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.|+.|+++|+++.++|+.+...+....+.+|+...-+. ++..+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~--i~~~d--------------------------- 380 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTE--TFSIE--------------------------- 380 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcce--eEecC---------------------------
Confidence 5789999999999999999999999999999999999987432111 00000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE-Eec-
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GIS- 770 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI-am~- 770 (826)
.+...-.|.-=..+++.+ ..+++++|||+.+|+.+-+.||+.. ++.
T Consensus 381 ------------------------------~v~~~~kP~~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~ 428 (459)
T PRK06698 381 ------------------------------QINSLNKSDLVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNF 428 (459)
T ss_pred ------------------------------CCCCCCCcHHHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeC
Confidence 000000111111223333 3578999999999999999999743 431
Q ss_pred CCchHHHHhhccccccchhcchhh
Q 003364 771 GREGLQAARAADYSIGKFRFLKRL 794 (826)
Q Consensus 771 gn~~~~~~~~Ad~v~~~~~~l~~l 794 (826)
+....+....+|+++.++..+..+
T Consensus 429 ~~~~~~~~~~~d~~i~~l~el~~~ 452 (459)
T PRK06698 429 DFAQEDELAQADIVIDDLLELKGI 452 (459)
T ss_pred CCCcccccCCCCEEeCCHHHHHHH
Confidence 221111223588888887777653
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0034 Score=64.13 Aligned_cols=44 Identities=16% Similarity=0.327 Sum_probs=40.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE 656 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~ 656 (826)
+++|++.+.++.|+++|+++.++||-....+..++++.|+..++
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~ 164 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPN 164 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcC
Confidence 57999999999999999999999999999999999999986443
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0022 Score=68.07 Aligned_cols=102 Identities=16% Similarity=0.072 Sum_probs=72.5
Q ss_pred eccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCC-CCCCCcEEEecCCCHHHHHHHHHHHHHHcccccC
Q 003364 610 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS-PEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTS 688 (826)
Q Consensus 610 ~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 688 (826)
..+++.+++.+++++|++.|++++++||++...+..+.+.+|+.. .-+. ++ +.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~--i~---~~--------------------- 237 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDD--LI---GR--------------------- 237 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhh--hh---CC---------------------
Confidence 456889999999999999999999999999999999999888743 1100 00 00
Q ss_pred CCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEE------EeCcccHHHHHHHhhc-CCCeEEEEcCCcccHHhHH
Q 003364 689 EPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICC------RVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQ 761 (826)
Q Consensus 689 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~------~~~p~~K~~iv~~l~~-~~~~v~~iGDg~ND~~ml~ 761 (826)
.....|. +-.|.-+..+++.+.. ..+.+++|||..+|+.+-+
T Consensus 238 -------------------------------~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~ 286 (300)
T PHA02530 238 -------------------------------PPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWR 286 (300)
T ss_pred -------------------------------cchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHH
Confidence 0000011 1123345666666544 4588999999999999999
Q ss_pred hCCccEE
Q 003364 762 KADIGVG 768 (826)
Q Consensus 762 ~A~vgIa 768 (826)
.||+.+.
T Consensus 287 ~~Gi~~i 293 (300)
T PHA02530 287 RIGLECW 293 (300)
T ss_pred HhCCeEE
Confidence 9998753
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0048 Score=58.80 Aligned_cols=54 Identities=17% Similarity=0.182 Sum_probs=45.3
Q ss_pred cCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCC-ChhHHHHHHHHcCCC
Q 003364 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGD-KQNTAIQIALSCNFI 653 (826)
Q Consensus 600 ~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd-~~~~a~~~a~~~gi~ 653 (826)
.+.......+-+-++.|++.++++.|+++|+++.++|+. ....+..+...+|+.
T Consensus 32 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 32 NNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred CCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 344566666666689999999999999999999999987 888888888888873
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.016 Score=55.27 Aligned_cols=39 Identities=10% Similarity=0.158 Sum_probs=35.4
Q ss_pred CCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC
Q 003364 615 QDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 615 ~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~ 653 (826)
.+.+.+.+.+|+++|++|+.+|.........+-+.+|+-
T Consensus 25 ~~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 25 WQPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred CCccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 346778999999999999999999999999999999976
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.003 Score=68.99 Aligned_cols=115 Identities=15% Similarity=0.050 Sum_probs=76.5
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHH-HcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIAL-SCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
++.|++.+.++.|+++|+++.++|+.+...+..... ..|+....+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd---------------------------------- 138 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFS---------------------------------- 138 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCC----------------------------------
Confidence 467999999999999999999999999888777665 566522111
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEe----Ccc--cHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCc
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV----TPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI 765 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v 765 (826)
..+..+- -|. -=..+++.++..++++++|||+.+|+.+-+.||+
T Consensus 139 ------------------------------~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi 188 (382)
T PLN02940 139 ------------------------------VIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGM 188 (382)
T ss_pred ------------------------------EEEehhhcCCCCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCC
Confidence 0111111 111 1235666666678899999999999999999998
Q ss_pred cEEecCCch--HHHHhhccccccchhcc
Q 003364 766 GVGISGREG--LQAARAADYSIGKFRFL 791 (826)
Q Consensus 766 gIam~gn~~--~~~~~~Ad~v~~~~~~l 791 (826)
......... ......+|+++.++..+
T Consensus 189 ~~I~v~~g~~~~~~~~~ad~~i~sl~el 216 (382)
T PLN02940 189 EVIAVPSIPKQTHLYSSADEVINSLLDL 216 (382)
T ss_pred EEEEECCCCcchhhccCccEEeCCHhHc
Confidence 653312211 21223577777666444
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0061 Score=59.21 Aligned_cols=61 Identities=18% Similarity=0.163 Sum_probs=41.0
Q ss_pred HHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE-Ee-cCCchHHHH-hhc--cccccchhcchhh
Q 003364 734 AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI-SGREGLQAA-RAA--DYSIGKFRFLKRL 794 (826)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI-am-~gn~~~~~~-~~A--d~v~~~~~~l~~l 794 (826)
..+++.++...+++++|||+.+|+.+-+.||+.. .+ .|....... ..+ |+++.++..+..+
T Consensus 110 ~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~ 175 (181)
T PRK08942 110 LSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQA 175 (181)
T ss_pred HHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHH
Confidence 3566666667789999999999999999999754 22 122221222 245 7787777666553
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0029 Score=60.85 Aligned_cols=93 Identities=19% Similarity=0.221 Sum_probs=69.8
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCC
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (826)
..++.+++.+++++|+++|++++++|+.+...+....+.+|+....+. +
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~--i----------------------------- 123 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDE--I----------------------------- 123 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSE--E-----------------------------
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCccccccccccccccccccc--c-----------------------------
Confidence 346889999999999999999999999999999999999997422110 0
Q ss_pred CceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEe----Cccc--HHHHHHHhhcCCCeEEEEcCCcccHHhHHhCC
Q 003364 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV----TPSQ--KAQLVELLKSCDYRTLAIGDGGNDVRMIQKAD 764 (826)
Q Consensus 691 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~p~~--K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ 764 (826)
+..+- .|.. =..+++.++..++++++|||+..|+.+-+.||
T Consensus 124 ---------------------------------~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G 170 (176)
T PF13419_consen 124 ---------------------------------ISSDDVGSRKPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAG 170 (176)
T ss_dssp ---------------------------------EEGGGSSSSTTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTT
T ss_pred ---------------------------------cccchhhhhhhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcC
Confidence 11110 1111 13466666667889999999999999999998
Q ss_pred ccE
Q 003364 765 IGV 767 (826)
Q Consensus 765 vgI 767 (826)
+.-
T Consensus 171 ~~~ 173 (176)
T PF13419_consen 171 IKT 173 (176)
T ss_dssp SEE
T ss_pred CeE
Confidence 753
|
... |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0052 Score=62.08 Aligned_cols=116 Identities=16% Similarity=0.120 Sum_probs=75.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+ +|+++.++|+.....+....+..|+...-+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd----------------------------------- 138 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFD----------------------------------- 138 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcC-----------------------------------
Confidence 46799999999999 689999999998888888888888732111
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEe----Cccc--HHHHHHHhhcC-CCeEEEEcCCc-ccHHhHHhCC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV----TPSQ--KAQLVELLKSC-DYRTLAIGDGG-NDVRMIQKAD 764 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~p~~--K~~iv~~l~~~-~~~v~~iGDg~-ND~~ml~~A~ 764 (826)
..+.++- -|.. =..+++.++.. .+++++|||+. +|+.+=+.||
T Consensus 139 -----------------------------~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG 189 (224)
T PRK09449 139 -----------------------------LLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAG 189 (224)
T ss_pred -----------------------------EEEEECccCCCCCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCC
Confidence 1111111 1111 12455666543 46899999998 7999999999
Q ss_pred ccE-EecCCchHHHH-hhccccccchhcchh
Q 003364 765 IGV-GISGREGLQAA-RAADYSIGKFRFLKR 793 (826)
Q Consensus 765 vgI-am~gn~~~~~~-~~Ad~v~~~~~~l~~ 793 (826)
+-. .+......... ..+|+++.++..|..
T Consensus 190 ~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~ 220 (224)
T PRK09449 190 IDTCWLNAHGREQPEGIAPTYQVSSLSELEQ 220 (224)
T ss_pred CcEEEECCCCCCCCCCCCCeEEECCHHHHHH
Confidence 854 44211111111 246777777666654
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0042 Score=60.61 Aligned_cols=40 Identities=18% Similarity=0.263 Sum_probs=34.3
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~ 653 (826)
-++.|++.++++.|+++|++++++|+. ..+..+.+..|+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 368899999999999999999999998 5567777788863
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0086 Score=58.18 Aligned_cols=89 Identities=16% Similarity=0.146 Sum_probs=63.0
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+++|++++++|+.+... .....++|+...-+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~----------------------------------- 128 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFD----------------------------------- 128 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCC-----------------------------------
Confidence 577999999999999999999999998877 55555577632211
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEe----Cc--ccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV----TP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
..++++- .| .-=..+++.++...+++++|||+..|+.+-+.+|+-
T Consensus 129 -----------------------------~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 129 -----------------------------VVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred -----------------------------EEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 0111110 11 111345666666688999999999999999999873
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0084 Score=60.34 Aligned_cols=59 Identities=15% Similarity=0.123 Sum_probs=39.7
Q ss_pred HHHHHHhh---cCCCeEEEEcCCcccHHhHHhCCccEEec--CCchHHHHhhccccccchhcch
Q 003364 734 AQLVELLK---SCDYRTLAIGDGGNDVRMIQKADIGVGIS--GREGLQAARAADYSIGKFRFLK 792 (826)
Q Consensus 734 ~~iv~~l~---~~~~~v~~iGDg~ND~~ml~~A~vgIam~--gn~~~~~~~~Ad~v~~~~~~l~ 792 (826)
..+++.+. ...+++++|||+..|+.+-+.||+..... +.........+|+++.++..+.
T Consensus 144 ~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~ 207 (220)
T PLN02811 144 LAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFK 207 (220)
T ss_pred HHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCC
Confidence 34566664 45688999999999999999999755331 2222222336788887766543
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.048 Score=55.92 Aligned_cols=50 Identities=12% Similarity=0.170 Sum_probs=40.6
Q ss_pred EEEeeccccCCchHHHHHHHHHcCCeEEEEcC---CChhHHHHHHHHcCCCCC
Q 003364 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTG---DKQNTAIQIALSCNFISP 655 (826)
Q Consensus 606 G~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TG---d~~~~a~~~a~~~gi~~~ 655 (826)
|.+.-.+..-+++.++|++|+++|++++++|| |+........+.+|+...
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 44444555667999999999999999999996 888888888889997543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0039 Score=60.78 Aligned_cols=39 Identities=18% Similarity=0.322 Sum_probs=31.9
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~ 653 (826)
++.|++.++|+.|+++|+++.++|+... +....+.+|+.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~ 125 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLI 125 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcH
Confidence 5679999999999999999999998643 45567777763
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.01 Score=56.08 Aligned_cols=35 Identities=17% Similarity=0.133 Sum_probs=27.4
Q ss_pred HHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 735 QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
.+++.++...+++++|||+.+|+.+-+.+|+....
T Consensus 111 ~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 111 PYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred HHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 34455555567899999999999999999986543
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.014 Score=56.29 Aligned_cols=57 Identities=19% Similarity=0.173 Sum_probs=39.1
Q ss_pred HHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE--Ee-cCCchHHHH-hhccccccchhcc
Q 003364 735 QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV--GI-SGREGLQAA-RAADYSIGKFRFL 791 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI--am-~gn~~~~~~-~~Ad~v~~~~~~l 791 (826)
.+++.++...++++||||+..|+.+=+.||+.. .. .|....... ..||+++.++..|
T Consensus 114 ~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 114 QARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred HHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 455555656788999999999999999999853 33 232222222 2488888776655
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.03 Score=59.25 Aligned_cols=188 Identities=13% Similarity=0.139 Sum_probs=98.8
Q ss_pred CcEEEEEEeecc--ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEec-C-----------
Q 003364 601 DLKVLGVTAIED--RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSID-G----------- 666 (826)
Q Consensus 601 ~l~~lG~i~~~d--~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~-~----------- 666 (826)
|.+++-+.---+ .+.++++++|+.|. ++..++++|||+...+..+..-.++.--...|.-+... +
T Consensus 106 DGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~~~~l~laGsHG~e~~~p~~g~~~~~~~~~~ 184 (354)
T PLN02151 106 DGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVKLTELYYAGSHGMDIKGPEQGSKYKKENQSL 184 (354)
T ss_pred CccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcCCccceEEEeCCceeecCCCCcccccccccc
Confidence 555554332223 37789999999999 56799999999999888776433321111111111000 0
Q ss_pred --CCHHHHHHHHHHHHHHcc-------cccCCCCceEEEEcCh-----hHHHHHHHHHHHH---hhhccccceeEEEEeC
Q 003364 667 --KTEDEVCRSLERVLLTMR-------ITTSEPKDVAFVVDGW-----ALEIALKHYRKAF---TELAILSRTAICCRVT 729 (826)
Q Consensus 667 --~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~g~-----~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~ 729 (826)
....+....+......+. -..-+.+.+++.+.-. ....+.....+.. +.+. +....-..++.
T Consensus 185 ~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~~~~l~~~l~~v~~~~~~l~-v~~GkkVvEvr 263 (354)
T PLN02151 185 LCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEENKWSDLANQVRSVLKNYPKLM-LTQGRKVLEIR 263 (354)
T ss_pred ccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChHHHHHHHHHHHHHHhhCCCcE-EecCCEEEEEe
Confidence 000000111112211111 1111233444443221 1222222222222 2122 22344556777
Q ss_pred cc---cHHHHHHHhhcC-C------CeEEEEcCCcccHHhHHhC-----CccEEecCCchHHHHh-hccccccchhcchh
Q 003364 730 PS---QKAQLVELLKSC-D------YRTLAIGDGGNDVRMIQKA-----DIGVGISGREGLQAAR-AADYSIGKFRFLKR 793 (826)
Q Consensus 730 p~---~K~~iv~~l~~~-~------~~v~~iGDg~ND~~ml~~A-----~vgIam~gn~~~~~~~-~Ad~v~~~~~~l~~ 793 (826)
|. +|+..++.+... + .-++++||...|-.||+.. |+||-+ |... +. .|+|.+.+-..+..
T Consensus 264 P~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~V-g~~~---k~T~A~y~L~dp~eV~~ 339 (354)
T PLN02151 264 PIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILV-SKYA---KETNASYSLQEPDEVME 339 (354)
T ss_pred CCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEe-ccCC---CCCcceEeCCCHHHHHH
Confidence 74 899999888753 1 2489999999999999864 677776 4321 22 68888877666555
Q ss_pred h
Q 003364 794 L 794 (826)
Q Consensus 794 l 794 (826)
+
T Consensus 340 ~ 340 (354)
T PLN02151 340 F 340 (354)
T ss_pred H
Confidence 3
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.011 Score=56.70 Aligned_cols=40 Identities=15% Similarity=0.270 Sum_probs=34.3
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCC-hhHHHHHHHHcCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDK-QNTAIQIALSCNF 652 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~-~~~a~~~a~~~gi 652 (826)
.+.+++.++++.|++.|++++++|+.+ ...+..+++.+|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 578999999999999999999999988 5666677777775
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0076 Score=60.82 Aligned_cols=120 Identities=17% Similarity=0.175 Sum_probs=77.1
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+++++|+++ ++++++|+-....+....+.+|+...-+. ++
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~--i~------------------------------ 143 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDD--IF------------------------------ 143 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCE--EE------------------------------
Confidence 5679999999999999 99999999999988888888887332110 00
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCccc--HHHHHHHh-hcCCCeEEEEcCCc-ccHHhHHhCCccE-
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQ--KAQLVELL-KSCDYRTLAIGDGG-NDVRMIQKADIGV- 767 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~--K~~iv~~l-~~~~~~v~~iGDg~-ND~~ml~~A~vgI- 767 (826)
....+. ...|.. =..+++.+ +...+++++|||+. +|+.+=+.+|+..
T Consensus 144 ---------------------------~~~~~~-~~KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i 195 (224)
T TIGR02254 144 ---------------------------VSEDAG-IQKPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTC 195 (224)
T ss_pred ---------------------------EcCccC-CCCCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEE
Confidence 000000 001221 13566666 65678899999998 8999999999743
Q ss_pred Eec-CCchHHHHhhccccccchhcchh
Q 003364 768 GIS-GREGLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 768 am~-gn~~~~~~~~Ad~v~~~~~~l~~ 793 (826)
... +..+......+++++.+...|..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~el~~ 222 (224)
T TIGR02254 196 WMNPDMHPNPDDIIPTYEIRSLEELYE 222 (224)
T ss_pred EECCCCCCCCCCCCCceEECCHHHHHh
Confidence 331 21111111245666666555543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.019 Score=53.51 Aligned_cols=27 Identities=30% Similarity=0.442 Sum_probs=24.9
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDK 639 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~ 639 (826)
++.|++.++++.|+++|++++++|+.+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 468999999999999999999999876
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.0082 Score=56.06 Aligned_cols=40 Identities=13% Similarity=0.016 Sum_probs=36.5
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi 652 (826)
-.++|++.+.++.|+ .++++.++|+-+...+..+.+.+++
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCc
Confidence 367999999999998 5799999999999999999988886
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.017 Score=57.25 Aligned_cols=39 Identities=8% Similarity=0.133 Sum_probs=32.4
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi 652 (826)
.+-|++.++++.|+++|++++++|+-... +....+.+|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 56799999999999999999999986653 4666777776
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.014 Score=52.99 Aligned_cols=39 Identities=13% Similarity=0.199 Sum_probs=33.7
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCC-ChhHHHHHHHHcC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGD-KQNTAIQIALSCN 651 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd-~~~~a~~~a~~~g 651 (826)
++.+++.+.++.|+++|++++++|+. ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 67899999999999999999999999 7777767666655
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.015 Score=54.74 Aligned_cols=38 Identities=13% Similarity=0.266 Sum_probs=33.1
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~ 650 (826)
...+++.++++.|+++|+++.++|+.....+....+..
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 34589999999999999999999999998888777664
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.045 Score=56.00 Aligned_cols=42 Identities=7% Similarity=0.218 Sum_probs=33.6
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhH---HHHHHHHcCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNT---AIQIALSCNFI 653 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~---a~~~a~~~gi~ 653 (826)
.++-|++.+.++.+++.|++++++|+|+... +....+..|+.
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~ 161 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFP 161 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcC
Confidence 3467999999999999999999999998543 34556667764
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.15 Score=52.12 Aligned_cols=45 Identities=20% Similarity=0.266 Sum_probs=39.1
Q ss_pred EEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHc
Q 003364 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (826)
Q Consensus 606 G~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~ 650 (826)
|.+.-.+.+-|++.++|+.|+++|++++++||++..+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 566666788999999999999999999999999998887777664
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.036 Score=55.29 Aligned_cols=100 Identities=15% Similarity=0.199 Sum_probs=66.7
Q ss_pred eccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcC---CCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccc
Q 003364 610 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCN---FISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRIT 686 (826)
Q Consensus 610 ~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~g---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (826)
++-++.|++.+++++|+++|+++.++|..+......+.+..+ +...
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~------------------------------- 140 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY------------------------------- 140 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh-------------------------------
Confidence 345788999999999999999999999998776666655542 2100
Q ss_pred cCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 687 TSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 687 ~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
|... + ...+...-.|.-=..+++.++...++++++||...|+.+=+.||+-
T Consensus 141 --------------------------f~~~--f-d~~~g~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ 191 (220)
T TIGR01691 141 --------------------------FSGY--F-DTTVGLKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLH 191 (220)
T ss_pred --------------------------cceE--E-EeCcccCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCE
Confidence 0000 0 0001100011111356777777788999999999999999999986
Q ss_pred EEe
Q 003364 767 VGI 769 (826)
Q Consensus 767 Iam 769 (826)
...
T Consensus 192 ti~ 194 (220)
T TIGR01691 192 TGQ 194 (220)
T ss_pred EEE
Confidence 533
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.045 Score=52.09 Aligned_cols=38 Identities=11% Similarity=0.167 Sum_probs=30.3
Q ss_pred CCchHHHHHHHHHcCCeEEEEcCCChh------------HHHHHHHHcCC
Q 003364 615 QDGVPETIETLRKAGINFWMLTGDKQN------------TAIQIALSCNF 652 (826)
Q Consensus 615 ~~~~~~aI~~l~~~Gi~v~i~TGd~~~------------~a~~~a~~~gi 652 (826)
-|++.++|++|+++|+++.++|..+.. .+..+.+.+|+
T Consensus 44 ~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl 93 (166)
T TIGR01664 44 YPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKV 93 (166)
T ss_pred cCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 489999999999999999999976542 34556667775
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.058 Score=66.81 Aligned_cols=118 Identities=11% Similarity=0.043 Sum_probs=80.2
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC-CCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI-SPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
+-|++.+.++.|+++|++++++|+.....+....+..|+. ...+. ++.
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~--iv~----------------------------- 210 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDA--IVS----------------------------- 210 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCE--EEE-----------------------------
Confidence 5699999999999999999999999999998888888873 11110 000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE-Ee
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI 769 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI-am 769 (826)
. .. +.+.-|. -=..+++.++..++++++|||+.+|+.+-+.||+-. ++
T Consensus 211 ------~----------------------~~-~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v 261 (1057)
T PLN02919 211 ------A----------------------DA-FENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAV 261 (1057)
T ss_pred ------C----------------------cc-cccCCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEE
Confidence 0 00 0011121 113466667667889999999999999999999743 33
Q ss_pred -cCCchHHHHh-hccccccchhcc
Q 003364 770 -SGREGLQAAR-AADYSIGKFRFL 791 (826)
Q Consensus 770 -~gn~~~~~~~-~Ad~v~~~~~~l 791 (826)
.+....++.. .+++++.++..+
T Consensus 262 ~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 262 TTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred CCCCCHHHHhhCCCCEEECChHHC
Confidence 2333344444 677888776554
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.083 Score=52.47 Aligned_cols=41 Identities=12% Similarity=0.248 Sum_probs=33.7
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhH---HHHHHHHcCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNT---AIQIALSCNFI 653 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~---a~~~a~~~gi~ 653 (826)
+.-|++.++++.++++|++|+++|||+... +..-.++.|+.
T Consensus 120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~ 163 (229)
T TIGR01675 120 PALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFT 163 (229)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCC
Confidence 667899999999999999999999999765 44455566763
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.059 Score=49.50 Aligned_cols=85 Identities=15% Similarity=0.157 Sum_probs=67.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
+..|+.++-+..++++|+++.++|..+...+...+..+|+..
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~f-------------------------------------- 87 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPF-------------------------------------- 87 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCce--------------------------------------
Confidence 477899999999999999999999999999999999999721
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccH--HHHHHHhhcCCCeEEEEcCCc-ccHHhHHhCCcc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK--AQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIG 766 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K--~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~vg 766 (826)
++--.-|..+ .++++.++...++|+|+||.. .|+-.=+.+|+-
T Consensus 88 -------------------------------i~~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~ 133 (175)
T COG2179 88 -------------------------------IYRAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMR 133 (175)
T ss_pred -------------------------------eecccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcE
Confidence 1112234433 367888888899999999985 588877777753
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.081 Score=50.72 Aligned_cols=156 Identities=23% Similarity=0.276 Sum_probs=77.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCC-CHHHHHHHHHHHHHHcccccCCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK-TEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
.+-|++.++++.|++.=-.+++-| .-..-+..+|..+|+.-..-.+.-+.++.. ..++.. .+.+..+...
T Consensus 83 ~lvPgA~etm~~l~~~~tp~v~ST-SY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR---~E~L~~~~~~----- 153 (315)
T COG4030 83 KLVPGAEETMATLQERWTPVVIST-SYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEER---EELLSIIDVI----- 153 (315)
T ss_pred ccCCChHHHHHHHhccCCceEEec-cHHHHHHHHHHhcCCCccccccccccCccccCChHHH---HHHHHhcCcc-----
Confidence 456999999999988655555544 445567788888887433222222222211 111111 1111111100
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEE--E-eCcccHHHHHHHhhcC---CCeEEEEcCCcccHHhHHhCC-
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICC--R-VTPSQKAQLVELLKSC---DYRTLAIGDGGNDVRMIQKAD- 764 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~--~-~~p~~K~~iv~~l~~~---~~~v~~iGDg~ND~~ml~~A~- 764 (826)
-.++|+.+-..++ +.|..+....-..++- + +--..|+++++.+.+. ....+++||+..|+.||+.+.
T Consensus 154 ---~~~~geelfe~lD---e~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rg 227 (315)
T COG4030 154 ---ASLSGEELFEKLD---ELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARG 227 (315)
T ss_pred ---ccccHHHHHHHHH---HHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhc
Confidence 0123332222121 1121110000000000 0 0113466777766553 345799999999999999973
Q ss_pred ---ccEEecCCchHHHHhhccccc
Q 003364 765 ---IGVGISGREGLQAARAADYSI 785 (826)
Q Consensus 765 ---vgIam~gn~~~~~~~~Ad~v~ 785 (826)
+.||..|| ..+.+-||+.+
T Consensus 228 rGglAvaFNGN--eYal~eAdVAv 249 (315)
T COG4030 228 RGGLAVAFNGN--EYALKEADVAV 249 (315)
T ss_pred cCceEEEecCC--cccccccceEE
Confidence 44555444 45666777755
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.047 Score=54.55 Aligned_cols=42 Identities=12% Similarity=0.208 Sum_probs=37.9
Q ss_pred ccCCchHHHHHHH--HHcCCeEEEEcCCChhHHHHHHHHcCCCC
Q 003364 613 RLQDGVPETIETL--RKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (826)
Q Consensus 613 ~l~~~~~~aI~~l--~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~ 654 (826)
|+.|+.+++++.+ +..|+.+.++|--+......+.+..|+..
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~ 114 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD 114 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc
Confidence 6789999999999 56899999999999999999999999854
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.054 Score=54.06 Aligned_cols=33 Identities=15% Similarity=0.186 Sum_probs=27.6
Q ss_pred HHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE
Q 003364 735 QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI 767 (826)
.+++.++..++++++|||...|+.+=+.||+-.
T Consensus 160 ~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 160 LMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred HHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 456666666788999999999999999999854
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.097 Score=51.64 Aligned_cols=35 Identities=6% Similarity=0.083 Sum_probs=28.9
Q ss_pred HHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 735 QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
.+++.++..++++++|||+..|+.+=+.+|+....
T Consensus 149 ~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~ 183 (199)
T PRK09456 149 HVLQAEGFSAADAVFFDDNADNIEAANALGITSIL 183 (199)
T ss_pred HHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEE
Confidence 46666666788999999999999999999986533
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.094 Score=56.01 Aligned_cols=90 Identities=16% Similarity=0.118 Sum_probs=67.3
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHH----cCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS----CNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTS 688 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 688 (826)
++.+++.++|+.|+++|+++.++|..+...+..+.+. +++...
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~--------------------------------- 77 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAED--------------------------------- 77 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHH---------------------------------
Confidence 3468899999999999999999999999999998877 554110
Q ss_pred CCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccH----HHHHHHhhcCCCeEEEEcCCcccHHhHHhCC
Q 003364 689 EPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK----AQLVELLKSCDYRTLAIGDGGNDVRMIQKAD 764 (826)
Q Consensus 689 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K----~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ 764 (826)
| ......++.| ..+++.++...+.+++|||+..|+.+.+.+.
T Consensus 78 ------------------------f----------~~~~~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~l 123 (320)
T TIGR01686 78 ------------------------F----------DARSINWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITL 123 (320)
T ss_pred ------------------------e----------eEEEEecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHC
Confidence 0 0011122334 3456666666789999999999999999988
Q ss_pred ccEEe
Q 003364 765 IGVGI 769 (826)
Q Consensus 765 vgIam 769 (826)
..|.+
T Consensus 124 p~~~~ 128 (320)
T TIGR01686 124 PVKTL 128 (320)
T ss_pred CCCcc
Confidence 77655
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.031 Score=56.23 Aligned_cols=115 Identities=8% Similarity=0.036 Sum_probs=73.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.| ++++.++|+.+...+....+..|+......
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~---------------------------------- 130 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPD---------------------------------- 130 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcc----------------------------------
Confidence 4568999999998 499999999988888888888887332110
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEE-Ee---Cc--ccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICC-RV---TP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~---~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
..+.+ ++ -| +-=..+++.+...++++++|||+.+|+.+=+.||+.
T Consensus 131 -----------------------------~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~ 181 (221)
T PRK10563 131 -----------------------------KLFSGYDIQRWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGME 181 (221)
T ss_pred -----------------------------eEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCE
Confidence 00011 01 11 111345666666678899999999999999999988
Q ss_pred EEecC--CchHHHHhhccccccchhcchh
Q 003364 767 VGISG--REGLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 767 Iam~g--n~~~~~~~~Ad~v~~~~~~l~~ 793 (826)
+.... .........++.+..++..|..
T Consensus 182 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 210 (221)
T PRK10563 182 VFYFCADPHNKPIDHPLVTTFTDLAQLPE 210 (221)
T ss_pred EEEECCCCCCcchhhhhhHHHHHHHHHHH
Confidence 75411 1111122234445555555554
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.2 Score=50.82 Aligned_cols=171 Identities=17% Similarity=0.152 Sum_probs=71.1
Q ss_pred ccCCchHHHHHHHHHcCC-eEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCH------HHHHHHHHHHHHHccc
Q 003364 613 RLQDGVPETIETLRKAGI-NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE------DEVCRSLERVLLTMRI 685 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi-~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 685 (826)
.+.+++.+++++|.+..- .|+|+|||+......+..--++.--..+|..+...+... .............+..
T Consensus 19 ~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 98 (235)
T PF02358_consen 19 VPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTNLPADEDLEWKDEVREILEY 98 (235)
T ss_dssp ---HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE-TTGGGGHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCccccccccccccchHHHHHHHHHHHH
Confidence 567899999999987644 799999999988555432222211122233333322211 1111111111111111
Q ss_pred -------ccCCCCceEEEEcC-----h----hHHHHHHHHHHHHh---hhccccceeEEEEeCcc--cHHHHHHHhhcCC
Q 003364 686 -------TTSEPKDVAFVVDG-----W----ALEIALKHYRKAFT---ELAILSRTAICCRVTPS--QKAQLVELLKSCD 744 (826)
Q Consensus 686 -------~~~~~~~~~l~~~g-----~----~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~~ 744 (826)
..-+.+.+.+...- . ....+...+.+... .+.... ..-..++.|. .|+.+++.+....
T Consensus 99 ~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~-g~~~vEvrp~~~~KG~av~~ll~~~ 177 (235)
T PF02358_consen 99 FAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVP-GKKVVEVRPPGVNKGSAVRRLLEEL 177 (235)
T ss_dssp HHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE--SSEEEEE-TT--HHHHHHHHHTTS
T ss_pred HHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEE-CCCEEEEEeCCCChHHHHHHHHHhc
Confidence 00112233333221 1 12222222222221 222222 2223455554 6999999887642
Q ss_pred -------CeEEEEcCCcccHHhHHhC------CccEEecCCch-HHHHhhccccc
Q 003364 745 -------YRTLAIGDGGNDVRMIQKA------DIGVGISGREG-LQAARAADYSI 785 (826)
Q Consensus 745 -------~~v~~iGDg~ND~~ml~~A------~vgIam~gn~~-~~~~~~Ad~v~ 785 (826)
.-++++||...|-.||+.. +++|.+ +... .+....|+|-+
T Consensus 178 ~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V-~~~~~~~~~t~A~y~l 231 (235)
T PF02358_consen 178 PFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKV-GSVSVGEKPTAASYRL 231 (235)
T ss_dssp ---------EEEEESSHHHHHHHHTTTTS----EEEEE-S---------------
T ss_pred CccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEE-Eeeccccccccccccc
Confidence 3699999999999999984 456666 4332 22223666654
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.12 Score=55.16 Aligned_cols=27 Identities=30% Similarity=0.410 Sum_probs=24.8
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGD 638 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd 638 (826)
-++.|++.++|++|+++|++++|+|+.
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 367899999999999999999999984
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.27 Score=47.34 Aligned_cols=40 Identities=13% Similarity=0.179 Sum_probs=36.3
Q ss_pred ccCCchHHHHHHHHHcCC-eEEEEcCCChhHHHHHHHHcCC
Q 003364 613 RLQDGVPETIETLRKAGI-NFWMLTGDKQNTAIQIALSCNF 652 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi-~v~i~TGd~~~~a~~~a~~~gi 652 (826)
|+.|+..++|+.+++.|. .++|+|--+......+.+..|+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~ 124 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGI 124 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccH
Confidence 678999999999999998 9999999999888888888886
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.42 Score=53.74 Aligned_cols=70 Identities=19% Similarity=0.272 Sum_probs=46.3
Q ss_pred cHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccchhcchhheeecchhhHHHHHHH
Q 003364 732 QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFL 809 (826)
Q Consensus 732 ~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~~~l~~l~l~~gr~~~~~~~~~ 809 (826)
+|..-++..........+.||+.+|.|||+.|+.++++ +. ++ .. -+...+..+.+++-+||..+.-.-..
T Consensus 176 ~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V-~~-----~~-~~-~~~~~~~~~~~~fhdgrl~~~p~~~~ 245 (497)
T PLN02177 176 HKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMV-PR-----TK-CE-PLPRNKLLSPVIFHEGRLVQRPTPLV 245 (497)
T ss_pred HHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEe-CC-----CC-CC-cCCcccCCCceeeeCCcccCCCCHHH
Confidence 47766654322112238999999999999999999999 43 11 11 13344677777777799987765333
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.2 Score=53.24 Aligned_cols=47 Identities=32% Similarity=0.489 Sum_probs=38.8
Q ss_pred EEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHH---HHcCC
Q 003364 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA---LSCNF 652 (826)
Q Consensus 606 G~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a---~~~gi 652 (826)
|.+.-.+.+-|++.++|++|+++|++++++|+++..+...++ +.+|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 555556777899999999999999999999999977766665 55676
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=93.95 E-value=0.11 Score=53.03 Aligned_cols=48 Identities=13% Similarity=0.171 Sum_probs=38.2
Q ss_pred EEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHH--HHHHHcCCC
Q 003364 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAI--QIALSCNFI 653 (826)
Q Consensus 606 G~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~--~~a~~~gi~ 653 (826)
|.+.-...+-|++.++|++|+++|+++.++|+.+...+. ...+.+|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 445556678899999999999999999999997665444 566778874
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.19 Score=48.99 Aligned_cols=90 Identities=9% Similarity=0.084 Sum_probs=60.6
Q ss_pred hHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEE
Q 003364 618 VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVV 697 (826)
Q Consensus 618 ~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 697 (826)
..+.+..|++. +++.++||.+...+....+..|+....+. ++
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~--i~----------------------------------- 133 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDA--VV----------------------------------- 133 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceE--EE-----------------------------------
Confidence 46899999875 89999999999999999999987332110 00
Q ss_pred cChhHHHHHHHHHHHHhhhccccceeEE-EEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE
Q 003364 698 DGWALEIALKHYRKAFTELAILSRTAIC-CRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767 (826)
Q Consensus 698 ~g~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI 767 (826)
.. ..+. .+-.|.-=..+++.++...+.+++|||+.+|+.+=+.||+-.
T Consensus 134 ~~----------------------~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 134 AA----------------------DDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred eh----------------------hhccCCCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 00 0000 001111123456666666778999999999999999999754
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.95 E-value=1.1 Score=45.76 Aligned_cols=192 Identities=16% Similarity=0.075 Sum_probs=97.5
Q ss_pred CcEEEEEEeec--cccCCchHHHHHHHHHc-CCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEE-EecCCCH-----H-
Q 003364 601 DLKVLGVTAIE--DRLQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLL-SIDGKTE-----D- 670 (826)
Q Consensus 601 ~l~~lG~i~~~--d~l~~~~~~aI~~l~~~-Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~-~~~~~~~-----~- 670 (826)
|.++..++-.. ..+.++..+++++|... ..-++|+|||+.........-.|+---...|..+ ..+|... .
T Consensus 26 DGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~ 105 (266)
T COG1877 26 DGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEA 105 (266)
T ss_pred cccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHH
Confidence 44444444443 35778999999999887 4479999999999988877643432222233333 3333321 1
Q ss_pred ------HHHHHHHHHHHHcccccCCCCceEEEEcChhHHH---HHHHHHHH---H--hhhcc-ccceeEEEEeCcccHHH
Q 003364 671 ------EVCRSLERVLLTMRITTSEPKDVAFVVDGWALEI---ALKHYRKA---F--TELAI-LSRTAICCRVTPSQKAQ 735 (826)
Q Consensus 671 ------~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~---~~~~~~~~---~--~~~~~-~~~~~i~~~~~p~~K~~ 735 (826)
++...++...+...-..-+.+.+++...-...+. ........ . .++.. ..+..+-++.+-..|+.
T Consensus 106 ~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~ 185 (266)
T COG1877 106 DLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGA 185 (266)
T ss_pred HhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHH
Confidence 1222222222222111111223333322111111 11111100 0 01111 22344555555557999
Q ss_pred HHHHhhcC----CCeEEEEcCCcccHHhHHhCC----ccEEecCCchHHHHhhccccccchhcchh
Q 003364 736 LVELLKSC----DYRTLAIGDGGNDVRMIQKAD----IGVGISGREGLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 736 iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~----vgIam~gn~~~~~~~~Ad~v~~~~~~l~~ 793 (826)
+++++... +.-+++.||...|-.||+..+ .+|-+ +-..++++..++.+-.....+..
T Consensus 186 a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v-~~~~t~a~~~~~~~~~~~~~l~~ 250 (266)
T COG1877 186 AIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKV-GVGSTQAKFRLAGVYGFLRSLYK 250 (266)
T ss_pred HHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEe-cCCcccccccccccHHHHHHHHH
Confidence 99976653 235899999999999999987 34444 44333344433333333344444
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=92.66 E-value=0.24 Score=48.10 Aligned_cols=93 Identities=8% Similarity=0.008 Sum_probs=63.7
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.+++.+++++|+ .+++++|+.+...+....+.+|+...-+. ++..
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~--i~~~---------------------------- 130 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDG--IFCF---------------------------- 130 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCe--EEEe----------------------------
Confidence 46789999999997 47999999999999999999987332110 0000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEE---eCccc--HHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR---VTPSQ--KAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~p~~--K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI 767 (826)
.....+ .-|.. =..+++.++..++++++|||+..|+.+=+.||+..
T Consensus 131 -----------------------------~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 131 -----------------------------DTANPDYLLPKPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred -----------------------------ecccCccCCCCCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 000000 12211 13566667767889999999999999999998754
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=92.52 E-value=0.45 Score=46.75 Aligned_cols=39 Identities=15% Similarity=0.176 Sum_probs=27.0
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi 652 (826)
++-|++.+++++|++++ +.+++|..+........+.+++
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l 112 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNL 112 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCH
Confidence 46799999999999985 5667776554444434455554
|
2 hypothetical protein; Provisional |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.33 E-value=0.28 Score=49.22 Aligned_cols=97 Identities=15% Similarity=0.158 Sum_probs=72.5
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.++.|+++|+.++++|+.+...+..+....|+......
T Consensus 86 ~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~---------------------------------- 131 (221)
T COG0637 86 KPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDV---------------------------------- 131 (221)
T ss_pred CCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcch----------------------------------
Confidence 6789999999999999999999999999999999999998543211
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI 767 (826)
++++... .-.+-.|+-=....+.|+-.+.++++|.|+.+.+.+-+.||+-+
T Consensus 132 ---~v~~~dv---------------------~~~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 132 ---IVTADDV---------------------ARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred ---hccHHHH---------------------hcCCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEE
Confidence 0000000 00011233334677777778899999999999999999999766
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=91.29 E-value=0.48 Score=47.70 Aligned_cols=40 Identities=18% Similarity=0.285 Sum_probs=30.7
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhH---HHHHHHHcCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNT---AIQIALSCNF 652 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~---a~~~a~~~gi 652 (826)
+.-|++.+.++.+++.|++|+++|||+... +..-.++.|+
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~ 157 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGF 157 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCC
Confidence 445789999999999999999999998653 2333455564
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=91.28 E-value=0.79 Score=43.22 Aligned_cols=91 Identities=15% Similarity=0.126 Sum_probs=67.3
Q ss_pred ccccCCchHHHHHHHHHcCC--eEEEEcCC-------ChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHH
Q 003364 611 EDRLQDGVPETIETLRKAGI--NFWMLTGD-------KQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLL 681 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi--~v~i~TGd-------~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (826)
++++.++..+.+++|++.+. +++++|.. ....|..+.+.+|+.-
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpv--------------------------- 109 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPV--------------------------- 109 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcE---------------------------
Confidence 56789999999999999987 49999987 3778889999999710
Q ss_pred HcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcC-----CCeEEEEcCC-cc
Q 003364 682 TMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC-----DYRTLAIGDG-GN 755 (826)
Q Consensus 682 ~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~-----~~~v~~iGDg-~N 755 (826)
..+...-|....+++++++.. .++++++||- ..
T Consensus 110 -----------------------------------------l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~T 148 (168)
T PF09419_consen 110 -----------------------------------------LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFT 148 (168)
T ss_pred -----------------------------------------EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHH
Confidence 011122454556777887654 7899999997 46
Q ss_pred cHHhHHhCC-ccEEe
Q 003364 756 DVRMIQKAD-IGVGI 769 (826)
Q Consensus 756 D~~ml~~A~-vgIam 769 (826)
|+-|=+..| .+|-+
T Consensus 149 DVl~gN~~G~~tilv 163 (168)
T PF09419_consen 149 DVLMGNRMGSYTILV 163 (168)
T ss_pred HHHHhhccCceEEEE
Confidence 888877777 55544
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=90.30 E-value=2.2 Score=39.70 Aligned_cols=34 Identities=21% Similarity=0.260 Sum_probs=30.5
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHH
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQ 645 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ 645 (826)
|..++++.+..++++++|++++-+|+|+...+..
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~ 59 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANR 59 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHH
Confidence 6899999999999999999999999999765543
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=90.00 E-value=4.2 Score=49.05 Aligned_cols=150 Identities=12% Similarity=0.048 Sum_probs=77.9
Q ss_pred cCCchHHHHHHHHHc-CCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEe-cC-------C--CHH---HHHHHHHHH
Q 003364 614 LQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSI-DG-------K--TED---EVCRSLERV 679 (826)
Q Consensus 614 l~~~~~~aI~~l~~~-Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~-~~-------~--~~~---~~~~~~~~~ 679 (826)
+.++..+++++|.+. +..|+|+|||+..........+++.--...|..+.. .+ . ... .+...++..
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l~l~aeHG~~~r~~~~~w~~~~~~~~~~~w~~~v~~~l~~~ 612 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYNIWLAAENGMFLRHTSGEWVTTMPEHMNLDWVDGVKNVFKYF 612 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCCCcEEEeCCEEEecCCCceeeccccccChhHHHHHHHHHHHH
Confidence 567888999999765 778999999999998887755443211222222110 11 0 000 011112222
Q ss_pred HHHcccccCCCCceEEEEcCh----hHH-HHHHHHHHHH-h------hhccccceeEEEEeCcc--cHHHHHHHhhcC--
Q 003364 680 LLTMRITTSEPKDVAFVVDGW----ALE-IALKHYRKAF-T------ELAILSRTAICCRVTPS--QKAQLVELLKSC-- 743 (826)
Q Consensus 680 ~~~~~~~~~~~~~~~l~~~g~----~~~-~~~~~~~~~~-~------~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~-- 743 (826)
.+...-..-+.+...++..-. .+. ....+...++ . .+.. ....-..++.|. +|+.+++.+...
T Consensus 613 ~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v-~~Gk~vvEvrp~gvnKG~Av~~ll~~~~ 691 (797)
T PLN03063 613 TDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDV-VRGQKSVEVHAIGVTKGAAIGRILGEIV 691 (797)
T ss_pred HHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEE-EECCeEEEEEcCCCChHHHHHHHHHHhh
Confidence 222211112234444443221 111 1222222222 1 1111 223344566676 799888877542
Q ss_pred --------CCeEEEEcCCc-ccHHhHHhCC
Q 003364 744 --------DYRTLAIGDGG-NDVRMIQKAD 764 (826)
Q Consensus 744 --------~~~v~~iGDg~-ND~~ml~~A~ 764 (826)
.+-|+++||.. -|-.||+.-+
T Consensus 692 ~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~ 721 (797)
T PLN03063 692 HNKSMTTPIDFVFCSGYFLEKDEDVYTFFE 721 (797)
T ss_pred hccccCCCCCEEEEeCCCCCCcHHHHHhcc
Confidence 35799999975 4999998654
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=89.80 E-value=0.52 Score=48.56 Aligned_cols=48 Identities=23% Similarity=0.336 Sum_probs=38.0
Q ss_pred EEEeeccc----cCCchHHHHHHHHHcCCeEEEEcCCChhH---HHHHHHHcCCC
Q 003364 606 GVTAIEDR----LQDGVPETIETLRKAGINFWMLTGDKQNT---AIQIALSCNFI 653 (826)
Q Consensus 606 G~i~~~d~----l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~---a~~~a~~~gi~ 653 (826)
|.+.-.+. +-|++.++|++|+++|++++++||++..+ ......++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 44444455 78899999999999999999999988776 45556667764
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=89.29 E-value=0.36 Score=43.15 Aligned_cols=33 Identities=12% Similarity=0.042 Sum_probs=28.7
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHH
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAI 644 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~ 644 (826)
+++.+++.+++++++++|+.++++|||+.....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 457789999999999999999999999987544
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=88.75 E-value=7.9 Score=47.01 Aligned_cols=150 Identities=13% Similarity=0.100 Sum_probs=77.7
Q ss_pred cCCchHHHHHHHHHc-CCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecC-CC-------HH-H----HHHHHHHH
Q 003364 614 LQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDG-KT-------ED-E----VCRSLERV 679 (826)
Q Consensus 614 l~~~~~~aI~~l~~~-Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~-~~-------~~-~----~~~~~~~~ 679 (826)
+.+++.++++.|.+. +..|+|+|||+..........+++.--...|..+...+ .. .+ + +...++..
T Consensus 623 p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~L~LaAEHG~~~R~~~~~w~~~~~~~~~~~W~~~v~~ile~~ 702 (934)
T PLN03064 623 LHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFDMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYF 702 (934)
T ss_pred CCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCCceEEeeCCeEEecCCCcceeccccccchHHHHHHHHHHHHH
Confidence 557788999999765 67899999999999888876654322222222221111 00 00 1 11111222
Q ss_pred HHHcccccCCCCceEEEEcCh----hHHHH-HHHHHHHH-h------hhccccceeEEEEeCcc--cHHHHHHHhhcC--
Q 003364 680 LLTMRITTSEPKDVAFVVDGW----ALEIA-LKHYRKAF-T------ELAILSRTAICCRVTPS--QKAQLVELLKSC-- 743 (826)
Q Consensus 680 ~~~~~~~~~~~~~~~l~~~g~----~~~~~-~~~~~~~~-~------~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~-- 743 (826)
.+...-..-+.+...++..-. .+... .++...++ . .+.. ....-..++.|. +|+.+++.+...
T Consensus 703 ~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V-~~Gk~VVEVrP~gvnKG~Av~~ll~~~~ 781 (934)
T PLN03064 703 TERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDV-VQGSRSVEVRPVGVTKGAAIDRILGEIV 781 (934)
T ss_pred HhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEE-EeCCeEEEEEcCCCCHHHHHHHHHHhhh
Confidence 111111111233444443221 11111 22222222 1 1111 223334566666 799888877652
Q ss_pred --------CCeEEEEcCCcc-cHHhHHhCC
Q 003364 744 --------DYRTLAIGDGGN-DVRMIQKAD 764 (826)
Q Consensus 744 --------~~~v~~iGDg~N-D~~ml~~A~ 764 (826)
.+-|+++||... |-.||+.-.
T Consensus 782 ~~~~~~~~~DFvlc~GDd~~~DEdmF~~l~ 811 (934)
T PLN03064 782 HSKSMTTPIDYVLCIGHFLGKDEDIYTFFE 811 (934)
T ss_pred hccccCCCCCEEEEeCCCCCCcHHHHHHHh
Confidence 366999999754 999998754
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=88.48 E-value=0.44 Score=41.02 Aligned_cols=48 Identities=21% Similarity=0.241 Sum_probs=35.4
Q ss_pred EEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHH---HHcCCC
Q 003364 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA---LSCNFI 653 (826)
Q Consensus 606 G~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a---~~~gi~ 653 (826)
|++...+++-|++.++|+.|+++|++++++|..+..+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 455556788899999999999999999999998766544443 566763
|
... |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=88.38 E-value=0.73 Score=47.27 Aligned_cols=42 Identities=7% Similarity=0.164 Sum_probs=38.6
Q ss_pred cC-CchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC
Q 003364 614 LQ-DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP 655 (826)
Q Consensus 614 l~-~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~ 655 (826)
+| |++.+++++|+++|++++++|+.+...+....+++|+...
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~Y 188 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRY 188 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcc
Confidence 45 9999999999999999999999999999999999999653
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.34 E-value=3.1 Score=42.62 Aligned_cols=46 Identities=22% Similarity=0.249 Sum_probs=38.7
Q ss_pred EEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHc
Q 003364 605 LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (826)
Q Consensus 605 lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~ 650 (826)
=|.+.--++.=|++.++|++|+++|++++++|..+..+...++.++
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 4777788889999999999999999999999999877776544443
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.20 E-value=1.2 Score=45.36 Aligned_cols=35 Identities=20% Similarity=0.107 Sum_probs=27.6
Q ss_pred HHHHHhhcCCCeEEEEcCC-cccHHhHHhCCccEEe
Q 003364 735 QLVELLKSCDYRTLAIGDG-GNDVRMIQKADIGVGI 769 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~vgIam 769 (826)
.+++.++..++++++|||+ ..|+.+=+.||+-...
T Consensus 171 ~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 171 LAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 3455666667899999999 5999999999976544
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=87.12 E-value=0.69 Score=37.22 Aligned_cols=56 Identities=20% Similarity=0.290 Sum_probs=39.0
Q ss_pred HHHHHhhcCCCeEEEEcCC-cccHHhHHhCCccE-Ee-cCCch-HHHH---hhccccccchhc
Q 003364 735 QLVELLKSCDYRTLAIGDG-GNDVRMIQKADIGV-GI-SGREG-LQAA---RAADYSIGKFRF 790 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~vgI-am-~gn~~-~~~~---~~Ad~v~~~~~~ 790 (826)
.+.+.+.....+++||||. ..|+.+=+.+|+.- .+ +|... +++. ..+|+|+.++..
T Consensus 12 ~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e 74 (75)
T PF13242_consen 12 QALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKE 74 (75)
T ss_dssp HHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGG
T ss_pred HHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHh
Confidence 4566666667889999999 99999999999744 33 23322 2332 378888877643
|
... |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=87.08 E-value=3 Score=43.51 Aligned_cols=48 Identities=23% Similarity=0.378 Sum_probs=35.5
Q ss_pred EEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHH---HHHHcCCC
Q 003364 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQ---IALSCNFI 653 (826)
Q Consensus 606 G~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~---~a~~~gi~ 653 (826)
|.+.-.+..-+++.++|++|+++|++++++||++..+... -.+.+|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 3344456677789999999999999999999987554433 44556763
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.84 E-value=4.9 Score=38.42 Aligned_cols=26 Identities=23% Similarity=0.399 Sum_probs=23.6
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCC
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDK 639 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~ 639 (826)
+.+++.+|+.+++++|++++|+|.-+
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQs 57 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQS 57 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCC
Confidence 56999999999999999999999753
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.68 E-value=3.9 Score=41.05 Aligned_cols=42 Identities=12% Similarity=0.039 Sum_probs=36.3
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~ 654 (826)
-+..+++.+++++++.. ++++++|.-....+.....++|+..
T Consensus 98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~ 139 (229)
T COG1011 98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLD 139 (229)
T ss_pred CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChh
Confidence 45778999999999999 9999999988888888999999743
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.60 E-value=2.1 Score=39.69 Aligned_cols=39 Identities=13% Similarity=0.259 Sum_probs=29.7
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCChhHH----HHHHHHcCC
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQNTA----IQIALSCNF 652 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a----~~~a~~~gi 652 (826)
+++-+++.|..-+..|-++..+|||....+ ..+|+...|
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i 157 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHI 157 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhccc
Confidence 456778899999999999999999987543 444555555
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=84.28 E-value=4.5 Score=41.18 Aligned_cols=30 Identities=13% Similarity=0.199 Sum_probs=26.4
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChh
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQN 641 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~ 641 (826)
.|.-|++.+..+.+++.|++|+++|||...
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 355679999999999999999999999854
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=84.10 E-value=13 Score=45.61 Aligned_cols=49 Identities=18% Similarity=0.250 Sum_probs=36.9
Q ss_pred eEEEEeCcc--cHHHHHHHhhcC----CCeE-EEEcCCcc-cHH-hHHhCCccEEecC
Q 003364 723 AICCRVTPS--QKAQLVELLKSC----DYRT-LAIGDGGN-DVR-MIQKADIGVGISG 771 (826)
Q Consensus 723 ~i~~~~~p~--~K~~iv~~l~~~----~~~v-~~iGDg~N-D~~-ml~~A~vgIam~g 771 (826)
.-+.++-|. .|+..+++|... .++| +++||+-| |.+ ||.--+-+|-+.|
T Consensus 945 ~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g 1002 (1050)
T TIGR02468 945 GTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKG 1002 (1050)
T ss_pred CcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEec
Confidence 467788887 699999998763 3455 66999999 955 6666677887744
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=82.92 E-value=2 Score=44.21 Aligned_cols=41 Identities=7% Similarity=0.115 Sum_probs=37.1
Q ss_pred CCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC
Q 003364 615 QDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP 655 (826)
Q Consensus 615 ~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~ 655 (826)
.|++.++|++|+++|+++.++|+.+...+.......|+...
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~y 190 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGY 190 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCcc
Confidence 38999999999999999999998888888999999999643
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=82.48 E-value=3.6 Score=46.68 Aligned_cols=27 Identities=19% Similarity=0.437 Sum_probs=24.5
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCCh
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQ 640 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~ 640 (826)
+-|++.++|++|+++|++++|+|.-+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGG 224 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcc
Confidence 469999999999999999999998655
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=82.05 E-value=1.3 Score=45.57 Aligned_cols=60 Identities=15% Similarity=0.175 Sum_probs=39.8
Q ss_pred HHHHHhhcCCCeEEEEcCCc-ccHHhHHhCCccE-Ee-cCC-chHHH---Hhhccccccchhcchhh
Q 003364 735 QLVELLKSCDYRTLAIGDGG-NDVRMIQKADIGV-GI-SGR-EGLQA---ARAADYSIGKFRFLKRL 794 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~vgI-am-~gn-~~~~~---~~~Ad~v~~~~~~l~~l 794 (826)
.+++.++...++++||||+. +|+.+=+.+|+-- .+ .|. ...+. ...+|+++.++..+..+
T Consensus 187 ~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~ 253 (257)
T TIGR01458 187 EALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDL 253 (257)
T ss_pred HHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHH
Confidence 45566666678999999996 9999999999744 33 232 11212 12467888777666553
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=81.57 E-value=1.3 Score=41.83 Aligned_cols=43 Identities=14% Similarity=0.015 Sum_probs=37.9
Q ss_pred eeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCC
Q 003364 609 AIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (826)
Q Consensus 609 ~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi 652 (826)
.+.=..||++.+.++.|.+. +.+++.|.-....|..+...++.
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCc
Confidence 34446899999999999987 99999999999999999988875
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=81.05 E-value=9.2 Score=40.80 Aligned_cols=38 Identities=13% Similarity=0.175 Sum_probs=35.1
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHc-C
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC-N 651 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~-g 651 (826)
..|++.+++++|+++|+++.++|+-+...+..+.+.+ |
T Consensus 185 ~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 185 RDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred cchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 3689999999999999999999999999999999886 5
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=80.28 E-value=1.6 Score=41.79 Aligned_cols=33 Identities=9% Similarity=0.012 Sum_probs=27.5
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi 652 (826)
++.|++.++++ +++++|+-+........+..|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l 122 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGL 122 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCC
Confidence 47789999998 3789999888888888888887
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 826 | ||||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 2e-15 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 4e-15 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 4e-15 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 3e-14 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 5e-12 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 1e-11 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 8e-11 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 2e-08 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 1e-05 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 3e-04 |
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 826 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 7e-40 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 3e-04 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-38 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 8e-05 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 8e-33 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-29 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 2e-28 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 6e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-06 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 7e-07 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 9e-07 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-06 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-06 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 1e-06 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-06 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 2e-06 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 5e-06 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 1e-05 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 3e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 6e-05 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 1e-04 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 2e-04 | |
| 1qzv_F | 154 | Plant photosystem I: subunit PSAF; photosynthesis, | 2e-04 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 3e-04 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 7e-40
Identities = 100/440 (22%), Positives = 142/440 (32%), Gaps = 94/440 (21%)
Query: 375 VEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVM 434
I +DKTGTLT+NRM + +T + S V+
Sbjct: 380 TSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSG----QTFDQSSETWRALCRVL 435
Query: 435 AVCNTVIPAKSKAGAILYKAQSQD------EEALVHAAAQLHMVLVNKNASILEIKFNGS 488
+CN A K+G + E AL+ + NA +
Sbjct: 436 TLCNR---AAFKSGQDAVPVPKRIVIGDASETALLKFSELTLG-----NAMGYRER---- 483
Query: 489 VLQYEILETLEFTSDRKRMSVVVK--DCHSGNISLLSKGADEAILP----YAHAGQ---- 538
+ + + F S K + D L+ KGA E +L GQ
Sbjct: 484 ---FPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPL 540
Query: 539 ---QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVC 595
F A LG R L + E +Y EA +
Sbjct: 541 DEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNF------------ 588
Query: 596 QRLEHDLKVLGVTAIED--RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653
L G+ ++ D R VP+ + R AGI M+TGD TA IA S I
Sbjct: 589 --PTSGLSFAGLVSMIDPPR--ATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGII 644
Query: 654 SPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG--------WALEIA 705
S E + L + A V++G L A
Sbjct: 645 SE-------------GSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEA 691
Query: 706 LKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI 765
L+ + + R +P QK +VE + GDG ND ++KADI
Sbjct: 692 LRTH-----------PEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADI 740
Query: 766 GV--GISGREGLQAAR-AAD 782
GV GI+G + AA+ AAD
Sbjct: 741 GVAMGIAGSD---AAKNAAD 757
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 3e-04
Identities = 24/143 (16%), Positives = 54/143 (37%), Gaps = 33/143 (23%)
Query: 37 LWEQFSRFMNQYFLLIA---CLQLWSLITPVNPASTWGPL---IFIFAV---SATKEAWD 87
Q + + + +A CL +++ +T L + + AV + +
Sbjct: 102 FARQLAGGLQ-CLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQ 160
Query: 88 DYNRYLSDKKANEK-----------EVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCD 136
++ K+ + V++ G K I + + VG++V ++ D VP D
Sbjct: 161 EF-------KS-TNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPAD 212
Query: 137 LVLIGTSDPQGVCYVETAALDGE 159
+ ++ V+ ++L GE
Sbjct: 213 IRILQAQG----RKVDNSSLTGE 231
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 1e-38
Identities = 102/442 (23%), Positives = 144/442 (32%), Gaps = 98/442 (22%)
Query: 375 VEYILTDKTGTLTENRMIFRRCCIGG-IFYGNETGDALKDVGLLNAITSGSPDVIRFLTV 433
I +DKTGTLT+NRM I + T + A S +
Sbjct: 375 TSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSG-----AAFDKTSATWSALSRI 429
Query: 434 MAVCN--TVIPAKSKAGAILYKAQSQD--EEALVHAAAQL---HMVLVNKNASILEIKFN 486
A+CN + + D E AL+ + ++N I+EI FN
Sbjct: 430 AALCNRAVFQAGQDNVPILKRSVAG-DASESALLKCIELCCGSVQGMRDRNPKIVEIPFN 488
Query: 487 GSVLQYEILETLEFTSDRKRMSVVVK--DCHSGNISLLSKGADEAILP----YAHAGQ-- 538
S K + + L+ KGA E IL G
Sbjct: 489 ---------------STNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEE 533
Query: 539 -----QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAE 593
F A + LG R L + ED+Y E + +
Sbjct: 534 PLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFP--------- 584
Query: 594 VCQRLEHDLKVLGVTAIED--RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCN 651
DL +G+ A+ D R VP+ + R AGI M+TGD TA IA
Sbjct: 585 -----TTDLCFVGLMAMIDPPR--AAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVG 637
Query: 652 FISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG--------WALE 703
IS +E + L + A VV G L+
Sbjct: 638 IISE-------------GNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLD 684
Query: 704 IALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKA 763
L ++ + R +P QK +VE + GDG ND ++KA
Sbjct: 685 DILHYH-----------TEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKA 733
Query: 764 DIGV--GISGREGLQAAR-AAD 782
DIGV GISG + ++ AAD
Sbjct: 734 DIGVAMGISGSD---VSKQAAD 752
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 8e-05
Identities = 23/143 (16%), Positives = 48/143 (33%), Gaps = 33/143 (23%)
Query: 37 LWEQFSRFMNQYFLLIA---CLQLWSLITPVNPASTWGPL---IFIFAV---SATKEAWD 87
Q + L I C + + L + + V + +
Sbjct: 97 FCRQLFGGFS-ILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQ 155
Query: 88 DYNRYLSDKKANEK-----------EVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCD 136
+ K+ + + V++ G K I ++ + G++V ++ D +P D
Sbjct: 156 EA-------KS-SRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPAD 207
Query: 137 LVLIGTSDPQGVCYVETAALDGE 159
L +I C V+ ++L GE
Sbjct: 208 LRIISAHG----CKVDNSSLTGE 226
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 8e-33
Identities = 85/425 (20%), Positives = 140/425 (32%), Gaps = 130/425 (30%)
Query: 366 TAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSP 425
TAI E++A ++ + +DKTGTLT N++ + + G E L
Sbjct: 315 TAI-EEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLL------------- 360
Query: 426 DVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQD--EEALVHAAAQLHMVLVNKNASILEI 483
A+ + + ++QD + A+V A
Sbjct: 361 -------FAAMAS--------------RVENQDAIDAAMVGMLADPKEARAG-------- 391
Query: 484 KFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTF 543
+ L F KR ++ D SGN +SKGA E IL A A
Sbjct: 392 --------IREVHFLPFNPVDKRTALTYID-GSGNWHRVSKGAPEQILELAKASNDLSKK 442
Query: 544 VEA-VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDL 602
V + +++Y++ GLR+L +A + V E +
Sbjct: 443 VLSIIDKYAERGLRSLAVARQVVPEKTKES-------------------------PGAPW 477
Query: 603 KVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA----LSCNFISPEPK 658
+ +G+ + D + ETI G+N M+TGD+ + + N
Sbjct: 478 EFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 537
Query: 659 GQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAI 718
V +E+ DG+A
Sbjct: 538 LGTHKDANLASIPVEELIEK------------------ADGFA----------------- 562
Query: 719 LSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 778
V P K ++V+ L+ + GDG ND ++KADIG+ ++ AA
Sbjct: 563 --------GVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVAD--ATDAA 612
Query: 779 R-AAD 782
R A+D
Sbjct: 613 RGASD 617
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 1e-29
Identities = 89/433 (20%), Positives = 142/433 (32%), Gaps = 99/433 (22%)
Query: 375 VEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDV-------------GLLNAIT 421
I +DKTGTLT N+M + I G+ + +
Sbjct: 346 TSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRS 405
Query: 422 SGSPDVIRFLTVMAVCN-TVIPAKSKAGAILYKAQSQD--EEALVHAAAQLHMVLVNKNA 478
++ T+ A+CN + + G Y+ + E AL ++++
Sbjct: 406 GQFDGLVELATICALCNDSSLDFNETKGV--YEKVG-EATETALTTLVEKMNVFNTEVRN 462
Query: 479 SILEIKFNGSVL----QYEILETLEFTSDRKRMSVVVKD----CHSGNISLLSKGADEAI 530
+ N + TLEF+ DRK MSV + + KGA E +
Sbjct: 463 LSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGV 522
Query: 531 LP---YAHAGQQTR--------TFVEAVEQYS--QLGLRTLCLAWREVEEDEYQEWSLMF 577
+ Y G + ++++ + LR L LA R+
Sbjct: 523 IDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKRE------- 575
Query: 578 KEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIED--RLQDGVPETIETLRKAGINFWML 635
+ + E DL +GV + D R V +I+ R AGI M+
Sbjct: 576 --------EMVLDDSSRFMEYETDLTFVGVVGMLDPPR--KEVMGSIQLCRDAGIRVIMI 625
Query: 636 TGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAF 695
TGD + TAI I + + G+ D+ +
Sbjct: 626 TGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDD-----------L----PL------ 664
Query: 696 VVDGWALEIALKHYRKAFTELA-ILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGG 754
E R RV PS K+++VE L+S D T GDG
Sbjct: 665 ------------------AEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGV 706
Query: 755 NDVRMIQKADIGV 767
ND ++KA+IG+
Sbjct: 707 NDAPALKKAEIGI 719
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 2e-28
Identities = 79/424 (18%), Positives = 134/424 (31%), Gaps = 134/424 (31%)
Query: 366 TAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSP 425
+AI E LA VE + +DKTGTLT+N++ G + D + L +
Sbjct: 364 SAI-ESLAGVEILCSDKTGTLTKNKLSLHDPYTVA---GVDPEDLMLTACLAASRKKKGI 419
Query: 426 DVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKF 485
D I ++A + + + S+L
Sbjct: 420 DAI------------------------------DKAFLKSLKYY-----PRAKSVLS--- 441
Query: 486 NGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAH-----AGQQT 540
+Y++L+ F K++ VV+ G KGA +L +
Sbjct: 442 -----KYKVLQFHPFDPVSKKVVAVVES-PQGERITCVKGAPLFVLKTVEEDHPIPEEVD 495
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
+ + V +++ G R+L +A + E
Sbjct: 496 QAYKNKVAEFATRGFRSLGVARKRGEG--------------------------------- 522
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
++LG+ D + +T+ + G++ MLTGD A + + + +
Sbjct: 523 SWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAE 582
Query: 661 LLS---IDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELA 717
L EV +E DG+A
Sbjct: 583 RLGLGGGGDMPGSEVYDFVEA------------------ADGFA---------------- 608
Query: 718 ILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQA 777
V P K +VE+L+ Y GDG ND ++KAD G+ + G A
Sbjct: 609 ---------EVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEG--SSDA 657
Query: 778 ARAA 781
AR+A
Sbjct: 658 ARSA 661
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 6e-12
Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 12/90 (13%)
Query: 491 QYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP---YAHAGQQTRTF---- 543
+++ ++ + F +R+RMSVVV + ++ + L+ KGA + IL +
Sbjct: 55 RWQKIDEIPFDFERRRMSVVVAE-NTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIM 113
Query: 544 ----VEAVEQYSQLGLRTLCLAWREVEEDE 569
+ ++ GLR + +A + + E
Sbjct: 114 LRKIKRVTDTLNRQGLRVVAVATKYLPARE 143
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 62.2 bits (150), Expect = 5e-10
Identities = 87/682 (12%), Positives = 184/682 (26%), Gaps = 195/682 (28%)
Query: 99 NEKEVWVVKQGIKKLIQSQDIR--VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAAL 156
+ + V + +D++ +I+ E D +++ G + L
Sbjct: 18 YKDILSVFEDAFVDNFDCKDVQDMPKSILSKEE-----IDHIIMSKDAVSGTLRLFWTLL 72
Query: 157 DGETDLKTRLIPAACMGMDFE-LLHKIKGVIECPGPDKDIRRFDGNLRLL----PPFIDN 211
+ ++ + + + ++++ L+ IK E P R + L F
Sbjct: 73 SKQEEMVQKFVEEV-LRINYKFLMSPIK--TEQRQPSMMTRMYIEQRDRLYNDNQVFAKY 129
Query: 212 DVC----PLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRGIPEPKLTAVDAMIDK 267
+V L ++ +L+ LR + V + G+ G + + A+D +
Sbjct: 130 NVSRLQPYLKLRQALLE---LRPAKN---VLID-------GVL-GSGKTWV-ALDVCLSY 174
Query: 268 LTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLV-----IPLRFE-- 320
F+I + N + L Q P + I LR
Sbjct: 175 KVQCKMDFKIFWL----NLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230
Query: 321 ------LLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETD-------TPSHATNTA 367
LL S + V L V + + + + T T
Sbjct: 231 QAELRRLLKSKPYENCLLV-LLNV---------QNAKAWNA-FNLSCKILLTTRFKQVTD 279
Query: 368 ISEDLAQVEYILTDKTGTLT--ENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSP 425
L + TLT E + + + D L + + +P
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLLLKY------LDCRPQD------LPREVLTTNP 327
Query: 426 DVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKF 485
+ ++I + G + V +K +I+E
Sbjct: 328 RRL----------SIIAESIRDGLATWD--------------NWKHVNCDKLTTIIESS- 362
Query: 486 NGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVE 545
L LE RK ++ P
Sbjct: 363 ---------LNVLEPAEYRKMF----DRL--------------SVFP------------P 383
Query: 546 AVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDL--- 602
+ + L L W +V + + ++ K +L++++ + E + +
Sbjct: 384 SA----HIPTILLSLIWFDVIKSDVMV--VVNKLHKYSLVEKQPK--ESTISI-PSIYLE 434
Query: 603 ---KVLGVTAIEDRLQDGV-------PETIETLRKAGINFWML--------TGDKQNTAI 644
K+ A+ + D + + + + ++
Sbjct: 435 LKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFR 494
Query: 645 QIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMR-----ITTSEPKDVAFVVDG 699
+ L F+ E K + D T S+ L ++ I ++PK V
Sbjct: 495 MVFLDFRFL--EQK---IRHDS-TAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNA- 547
Query: 700 WALEIALKHYRKAFTELAILSR 721
+ + E I S+
Sbjct: 548 ------ILDFLPKIEENLICSK 563
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.2 bits (137), Expect = 2e-08
Identities = 56/353 (15%), Positives = 99/353 (28%), Gaps = 115/353 (32%)
Query: 483 IKFNGSVLQY---EILETLE--FTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG 537
+ F QY +IL E F + KD S+LSK + I+ A
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDN-----FDCKDVQDMPKSILSKEEIDHIIMSKDAV 61
Query: 538 QQTRTFV--------EAVEQYSQLGLRT----LCLAWREVEEDEYQEWSLMFKEASSTLI 585
T E V+++ + LR L + E ++ S+M +
Sbjct: 62 SGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKT----EQRQPSMMTRMYIEQR- 116
Query: 586 DREWRIAEV-----CQRLEHDLKVLGVTAIEDRLQDGVPE----------------TIET 624
DR + +V RL+ + L + P ++
Sbjct: 117 DRLYNDNQVFAKYNVSRLQP------YLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV 170
Query: 625 LRKAGIN-------FWMLTGDK----------QNTAIQIA--------------LSCNFI 653
+ FW+ + Q QI L + I
Sbjct: 171 CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230
Query: 654 SPEPKGQLLSIDGKTE----DEVC--RSLE------RVLLTMRITTSEPKDVAFVVDGWA 701
E + L S + V ++ ++LLT R K V +
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTR-----FKQVTDFLSAAT 285
Query: 702 L-EIALKHYRKAFTE---LAILSRTAIC---------CRVTPSQKAQLVELLK 741
I+L H+ T ++L + C P + + + E ++
Sbjct: 286 TTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIR 338
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.9 bits (118), Expect = 4e-06
Identities = 31/234 (13%), Positives = 70/234 (29%), Gaps = 67/234 (28%)
Query: 12 TSQDLYCANRLSNRKYT-------LMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPV 64
T++ + LS T M P + ++++ L +
Sbjct: 271 TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD-----CRPQDLPREVLTT 325
Query: 65 NPASTWGPLIFIFA--VSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR-- 120
NP + I A + WD++ DK +++ + L + + R
Sbjct: 326 NPR-----RLSIIAESIRDGLATWDNWKHVNCDKLTT-----IIESSLNVL-EPAEYRKM 374
Query: 121 ----------------VGNIVWLRENDEVPCDLV-------LIGTSDPQGVCYVETAALD 157
+ +++W +V L+ + +
Sbjct: 375 FDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI----PS 430
Query: 158 GETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDN 211
+LK +L + LH+ +++ + FD + L+PP++D
Sbjct: 431 IYLELKVKL-------ENEYALHRS--IVDH---YNIPKTFDSD-DLIPPYLDQ 471
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.5 bits (117), Expect = 4e-06
Identities = 100/756 (13%), Positives = 201/756 (26%), Gaps = 263/756 (34%)
Query: 10 DETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQ-----LWSLITPV 64
E + + + L L E +F+ + L+ L S I
Sbjct: 48 KEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEE------VLRINYKFLMSPIKTE 101
Query: 65 NPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRV-GN 123
+ ++I ++D + + + ++Q + +L ++++ + G
Sbjct: 102 QRQPSMMTRMYIEQRDRL---YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG- 157
Query: 124 IVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIK 183
++G+ G KT + C + +++ K+
Sbjct: 158 ---------------VLGS----G---------------KTWVALDVC--LSYKVQCKMD 181
Query: 184 GVI------ECPGPDKDI-------RRFDGNLRLLPPFIDNDVCPLTI-------KNTIL 223
I C P+ + + D N N L I + +
Sbjct: 182 FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI--KLRIHSIQAELRRLLK 239
Query: 224 QSCY------LRNTEWACGVAVYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQI 277
Y L N K+ +T T + D L+ A
Sbjct: 240 SKPYENCLLVLLNV-QNAKAWNAFNLSCKILLT--------TRFKQVTDFLSAA-----T 285
Query: 278 VVVIVLGTAGNVWKDTEARK---QWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVS 334
I L E + ++ PQ+ P L P S +I SI+
Sbjct: 286 TTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP----RRLS-IIAESIRDG 340
Query: 335 LDLVKSLYAKFIDWD-YEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIF 393
L WD ++ ++ + T I L +E E R +F
Sbjct: 341 LAT----------WDNWKHVNCD------KLTTIIESSLNVLEP---------AEYRKMF 375
Query: 394 RRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYK 453
R +F P + IP + ++++
Sbjct: 376 DRL---SVF----------------------PP-----------SAHIP--TILLSLIWF 397
Query: 454 AQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKD 513
+ + +V +LH S++E K ++ +
Sbjct: 398 DVIKSDVMVV--VNKLH------KYSLVE-------------------KQPKESTISIPS 430
Query: 514 CHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREV--EEDEYQ 571
+ + L K +E L H V+ Y+ +T + D+Y
Sbjct: 431 IY---LELKVKLENEYAL---HR--------SIVDHYNI--PKTFDS-DDLIPPYLDQYF 473
Query: 572 EWSLMF--KEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAG 629
+ K +R + D + L + +R
Sbjct: 474 YSHIGHHLKNIEHPERMTLFR------MVFLDFRFLE----------------QKIRHDS 511
Query: 630 INFWMLTGDKQNTAIQIALSCNFISP-EPKGQLLSIDGKTEDEVCRSLERVLLTM--RIT 686
W +G NT Q+ +I +P + + ++ L + +
Sbjct: 512 TA-WNASGSILNTLQQLKFYKPYICDNDP----------KYERLVNAILDFLPKIEENLI 560
Query: 687 TSEPKDVAFVVDGWALEIALKH-----YRKAFTELA 717
S+ D+ L IAL + +A ++
Sbjct: 561 CSKYTDL--------LRIALMAEDEAIFEEAHKQVQ 588
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 7e-07
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 730 PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767
K Q V KS YR +A GD ND M+ +A G+
Sbjct: 131 KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGI 168
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 9e-07
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
D K + + +ED ++ PETI L+++GI MLTGD + TA +A
Sbjct: 542 DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVA 588
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 1e-06
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
+ +V G+ A+ D L++ ++ L++ GI M+TGD +A I+
Sbjct: 445 NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS 491
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 1e-06
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
+ +V G+ A+ D L++ ++ L++ GI M+TGD +A I+
Sbjct: 523 NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS 569
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 1e-06
Identities = 9/47 (19%), Positives = 25/47 (53%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
+ + + I D + + + +E L+ G+ +L+GDK++ +++
Sbjct: 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELS 170
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 49.4 bits (119), Expect = 2e-06
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
+ +V G+ A+ D L++ ++ L++ GI M+TGD +A I+
Sbjct: 151 NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS 197
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 49.0 bits (118), Expect = 2e-06
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
+ +V GV A+ DR++ E I L+ GI MLTGD + A +A
Sbjct: 132 NGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVA 178
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 5e-06
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 733 KAQLVELLKS-CDY-RTLAIGDGGNDVRMIQKADIGVGISGREGLQA-ARAADYSIGKFR 789
K ++++LLK + + + IGDG D+ AD +G G Q A + I F
Sbjct: 158 KGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFV 217
Query: 790 FL 791
L
Sbjct: 218 EL 219
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 25/190 (13%), Positives = 54/190 (28%), Gaps = 57/190 (30%)
Query: 602 LKVLGVTAIED-----RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE 656
LK + + ++ L +G E + L++ +G +
Sbjct: 59 LKNMPLKLAKEVCESLPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHL--DA 116
Query: 657 PKG-QLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTE 715
L+ + L +T ++ + L ++
Sbjct: 117 AFSNTLIVENDA-------------LNGLVT--GH-----MMFSHSKGEMLLVLQRLL-- 154
Query: 716 LAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775
++ + TL +GDG ND+ M + A I + + +E L
Sbjct: 155 -----------NISKTN--------------TLVVGDGANDLSMFKHAHIKIAFNAKEVL 189
Query: 776 QAARAADYSI 785
+ A + I
Sbjct: 190 KQ--HATHCI 197
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 3e-05
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 746 RTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 785
T+A+GDG ND+ M +KA + + + L+ AD I
Sbjct: 161 DTVAVGDGANDISMFKKAGLKIAFCAKPILKE--KADICI 198
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 6e-05
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 746 RTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 785
T+A+GDG ND+ M+ A +GV + ++A A ++
Sbjct: 263 NTVAVGDGANDLVMMAAAGLGVAYHAKPKVEA--KAQTAV 300
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 1e-04
Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 746 RTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 785
+A GDG ND+ M++ A G+ + ++ + I
Sbjct: 264 NIIACGDGANDLPMLEHAGTGIAWKAKPVVRE--KIHHQI 301
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 2e-04
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 733 KAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766
K ++ L + + IGD DV + +D+
Sbjct: 152 KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLC 185
|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Score = 41.9 bits (97), Expect = 2e-04
Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 5/31 (16%)
Query: 193 KDIRRFDGNLRLLPPFIDNDVCP-LTIKNTI 222
+ +++ +L+L D P L IK T+
Sbjct: 20 QALKKLQASLKLYAD----DSAPALAIKATM 46
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 3e-04
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 746 RTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 785
+T+A+GDG ND+ M+ A +G+ + + L+ AD S+
Sbjct: 341 QTVAVGDGANDIDMLAAAGLGIAFNAKPALRE--VADASL 378
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 826 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.87 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.91 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.9 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.88 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.88 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.68 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.58 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.55 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.54 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.53 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.53 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.48 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.46 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.43 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.43 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.4 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.37 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.34 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.34 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 99.33 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.32 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.31 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.28 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.26 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.25 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.23 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.23 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.2 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.2 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.2 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.17 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 99.12 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.1 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.1 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.09 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 99.07 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.07 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.06 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 99.04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.99 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.99 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.98 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.85 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.85 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.82 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.8 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.8 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.79 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.75 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.74 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.72 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.72 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.69 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.68 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.66 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.63 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.63 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.62 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.61 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.61 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.59 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.57 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.54 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.54 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.5 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.5 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.48 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.46 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.44 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.43 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.43 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.42 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.41 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.41 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.39 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.39 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.37 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.36 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.35 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.34 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 98.34 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 98.34 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.33 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.33 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.3 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.3 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.3 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 98.3 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.29 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.27 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.27 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.25 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.25 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 98.23 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.22 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 98.19 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.18 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.18 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.17 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.14 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 98.12 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 98.08 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.08 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 98.07 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 98.04 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 98.03 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 98.01 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 97.97 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.89 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.88 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 97.87 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.81 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.79 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 97.79 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.68 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.65 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.61 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 97.61 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.55 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.55 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.51 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.45 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 97.36 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 97.31 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 97.14 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 97.1 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 97.08 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 97.03 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 96.99 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.99 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.72 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 96.53 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 96.49 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 96.37 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 96.17 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 96.15 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 96.12 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 96.11 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 95.66 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 95.54 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 95.32 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 95.18 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 95.14 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 94.24 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 93.67 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 93.39 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 93.06 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 92.76 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 92.45 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 89.92 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 89.16 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 87.05 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 86.3 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 85.58 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 84.35 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-93 Score=866.20 Aligned_cols=692 Identities=21% Similarity=0.215 Sum_probs=525.3
Q ss_pred CCccccccCCCceEEeecc-cccccccHHHHHHhhhHHHHHHHHHHHHhhccCcc--------ccCcccchhhhhhhhhh
Q 003364 9 DDETSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT--------PVNPASTWGPLIFIFAV 79 (826)
Q Consensus 9 ~~~~r~~~~g~N~i~~~~~-~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~--------~~~~~~~~~~l~~i~~~ 79 (826)
+.++|+++||+|+++.++. ++| +.|++||+++++++++++++++++.... ..+.+...+++++++++
T Consensus 77 ea~~rl~~~G~N~l~~~~~~~~~----~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i 152 (1034)
T 3ixz_A 77 LAAELLLRDGPNALRPPRGTPEY----VKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVV 152 (1034)
T ss_pred HHHHHHHhhCCCCCCCCCCCCHH----HHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCCccccchhhhhhhheeeeH
Confidence 3457999999999998776 456 8899999999999888888877654211 01123334556667778
Q ss_pred hhhHHHHHHHHhhhhh---HhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCC
Q 003364 80 SATKEAWDDYNRYLSD---KKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAAL 156 (826)
Q Consensus 80 ~~~~~~~~~~~~~~~~---~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~l 156 (826)
++++.+++++|+.++. +++.+++++|+|||++++|++++|||||||.|++||+|||||+|+++++ +.||||+|
T Consensus 153 ~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~----l~VdES~L 228 (1034)
T 3ixz_A 153 TGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQG----RKVDNSSL 228 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceecCCeEEEEeCC----ceEEeccc
Confidence 8899999999987764 4556789999999999999999999999999999999999999997665 88999999
Q ss_pred CCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEE
Q 003364 157 DGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACG 236 (826)
Q Consensus 157 TGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~ 236 (826)
||||.|+.|.+... ...++..+|.+|+||.+.+| .+.+
T Consensus 229 TGES~pv~K~~~~~-----------------------------------------~~~~~~~~n~~f~GT~v~~G-~~~~ 266 (1034)
T 3ixz_A 229 TGESEPQTRSPECT-----------------------------------------HESPLETRNIAFFSTMCLEG-TAQG 266 (1034)
T ss_pred CCCCCCeeccCCCc-----------------------------------------cccccccccceecceeEEee-cceE
Confidence 99999999964311 11233568999999999999 7999
Q ss_pred EEEEeCCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhh
Q 003364 237 VAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELL 313 (826)
Q Consensus 237 ~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (826)
+|++||.+|.+|++.+ ..+.+++|+++.+++++.++..+++++++++++++..+ ..+|...+
T Consensus 267 vVv~tG~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---------------~~~~~~~~ 331 (1034)
T 3ixz_A 267 LVVNTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCI---------------GYTFLRAM 331 (1034)
T ss_pred EEEeehhhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------cchHHHHH
Confidence 9999999999998654 45678899999999999988888777766665544221 11334444
Q ss_pred hhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeE
Q 003364 314 VIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIF 393 (826)
Q Consensus 314 ~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v 393 (826)
.. ++.++..++|++||++++++..++.+ +|.+++ +++|++.++|+||++++||||||||||+|+|+|
T Consensus 332 ~~---~i~l~v~~iPe~Lp~~vti~la~~~~------rmak~~----~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v 398 (1034)
T 3ixz_A 332 VF---FMAIVVAYVPEGLLATVTVCLSLTAK------RLASKN----CVVKNLEAVETLGSTSVICSDKTGTLTQNRMTV 398 (1034)
T ss_pred HH---HHHHHHheeccccHHHHHHHHHHHHH------HHhhCC----eEecChHHHHhhcCCcEEEcCCCCCcccCeEEE
Confidence 33 33467788999999999988888877 555554 899999999999999999999999999999999
Q ss_pred EEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCc---eeeecCCccHHHHHHHHHhCC
Q 003364 394 RRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGA---ILYKAQSQDEEALVHAAAQLH 470 (826)
Q Consensus 394 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~---~~~~~~~~~e~all~~a~~~~ 470 (826)
.++++++..+..+...... .......++....++.++++||++.....++.. -....++|+|.|+++++.+.+
T Consensus 399 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~ 474 (1034)
T 3ixz_A 399 SHLWFDNHIHSADTTEDQS----GQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTL 474 (1034)
T ss_pred EEEEECCccccccCccccc----ccccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhC
Confidence 9999987665433211100 001122344567888999999987654332211 123468999999999998765
Q ss_pred eEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecC--CCeEEEEecCchhhhhhhhhc-----------C
Q 003364 471 MVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCH--SGNISLLSKGADEAILPYAHA-----------G 537 (826)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~--~~~~~~~~KGa~e~i~~~~~~-----------~ 537 (826)
... .+.+..|+++..+||+|++|||+++++..+ ++++.+|+|||||.|+++|+. +
T Consensus 475 ~~~------------~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~ 542 (1034)
T 3ixz_A 475 GNA------------MGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDE 542 (1034)
T ss_pred CCh------------HHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCH
Confidence 321 223456788999999999999998887543 467899999999999999973 1
Q ss_pred CChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCc
Q 003364 538 QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDG 617 (826)
Q Consensus 538 ~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~ 617 (826)
..++.+.+.+.+++.+|+||+++|||.++.++++++.... .+..+..|+|++|+|+++++||+|++
T Consensus 543 ~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~--------------~~~~~~~e~~l~~lGlv~i~Dp~r~~ 608 (1034)
T 3ixz_A 543 QWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFD--------------VEAMNFPTSGLSFAGLVSMIDPPRAT 608 (1034)
T ss_pred HHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccc--------------hhhhhccccCcEEEEEEeccCCCchh
Confidence 1245678889999999999999999999876544321100 01123467999999999999999999
Q ss_pred hHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEE
Q 003364 618 VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVV 697 (826)
Q Consensus 618 ~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 697 (826)
++++|++|+++||+++|+|||++.+|.++|+++|+...... ...+..... ...............++
T Consensus 609 ~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~---------~i~~~~~~~----~~~~~~~~~~~~~~~~~ 675 (1034)
T 3ixz_A 609 VPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSE---------TVEDIAARL----RVPVDQVNRKDARACVI 675 (1034)
T ss_pred HHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCch---------HHHHHHHhh----CccchhccccccceeEE
Confidence 99999999999999999999999999999999999754321 111110000 00000011122334566
Q ss_pred cChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecC-CchHH
Q 003364 698 DGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG-REGLQ 776 (826)
Q Consensus 698 ~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g-n~~~~ 776 (826)
+|..+....... +..........+|++++|.+|.++++.++..++.|+|+|||.||++||+.||+|||| | |+.+.
T Consensus 676 ~g~~l~~~~~~~---l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAM-g~ng~d~ 751 (1034)
T 3ixz_A 676 NGMQLKDMDPSE---LVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAM-GIAGSDA 751 (1034)
T ss_pred ecHhhhhCCHHH---HHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEe-CCccCHH
Confidence 676655433221 111111223468999999999999999999999999999999999999999999999 6 88999
Q ss_pred HHhhccccccchhcchhh-eeecchhhHHHHHHHHHHHhhhhHHHHHhhh
Q 003364 777 AARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825 (826)
Q Consensus 777 ~~~~Ad~v~~~~~~l~~l-~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (826)
+|++||+|+.+++..... .+.+||++|+|+++++.|.+++|+..+++.|
T Consensus 752 aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~ 801 (1034)
T 3ixz_A 752 AKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYL 801 (1034)
T ss_pred HHHhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999765544433 3558999999999999999999997665543
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-92 Score=854.11 Aligned_cols=687 Identities=22% Similarity=0.246 Sum_probs=514.3
Q ss_pred CccccccCCCceEEeec-ccccccccHHHHHHhhhHHHHHHHHHHHHhhccCccc--------cCcccchhhhhhhhhhh
Q 003364 10 DETSQDLYCANRLSNRK-YTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITP--------VNPASTWGPLIFIFAVS 80 (826)
Q Consensus 10 ~~~r~~~~g~N~i~~~~-~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~--------~~~~~~~~~l~~i~~~~ 80 (826)
.++|+++||+|+++.++ .++| ..|++||.+|++++++++++++++..... .+.++..++++++++++
T Consensus 73 ~~~r~~~~G~N~l~~~~~~~~~----~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~ 148 (1028)
T 2zxe_A 73 AKEILARDGPNSLTPPPTTPEW----IKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVT 148 (1028)
T ss_dssp HHHHHHHHCCSCCCCCCCCCHH----HHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHH
Confidence 35699999999999975 4666 88999999999999999888887542110 01122334556677788
Q ss_pred hhHHHHHHHHhhhh---hHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCC
Q 003364 81 ATKEAWDDYNRYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALD 157 (826)
Q Consensus 81 ~~~~~~~~~~~~~~---~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lT 157 (826)
.++++++++++.++ ++++.+++++|+|||++++|++++|+|||||.|++||+|||||+|+++++ |.||||+||
T Consensus 149 ~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~VdeS~LT 224 (1028)
T 2zxe_A 149 GCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG----CKVDNSSLT 224 (1028)
T ss_dssp HHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE----EEEECHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCEeeceEEEEeeCc----EEEEcCccC
Confidence 88999999886554 45667899999999999999999999999999999999999999995433 899999999
Q ss_pred CCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEE
Q 003364 158 GETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGV 237 (826)
Q Consensus 158 GEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~ 237 (826)
|||.|+.|.+.+. ...+++.+|.+|+||.+.+| ++.++
T Consensus 225 GES~pv~K~~~~~-----------------------------------------~~~~~~~~n~v~~GT~v~~G-~~~~~ 262 (1028)
T 2zxe_A 225 GESEPQTRSPEFS-----------------------------------------SENPLETRNIAFFSTNCVEG-TARGV 262 (1028)
T ss_dssp SCCSCEECCSSCC-----------------------------------------CSSTTTCSSEECTTCEEEEE-EEEEE
T ss_pred CCCcceecccCCC-----------------------------------------CCCcccccceEEeCceEEcc-eEEEE
Confidence 9999999965421 11134678999999999999 89999
Q ss_pred EEEeCCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhh
Q 003364 238 AVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLV 314 (826)
Q Consensus 238 V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (826)
|++||.+|.+|++.+ ..+.+++++++.+++++.+++.+++++++++++++... ..+|...+.
T Consensus 263 V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~---------------~~~~~~~~~ 327 (1028)
T 2zxe_A 263 VVYTGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLIL---------------GYSWLEAVI 327 (1028)
T ss_dssp EEECGGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---------------TCCHHHHHH
T ss_pred EEEeccccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---------------cCcHHHHHH
Confidence 999999999998654 46778899999999999999888887777666553211 112333333
Q ss_pred hhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEE
Q 003364 315 IPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFR 394 (826)
Q Consensus 315 ~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~ 394 (826)
+++. ++..++|++||++++++..+++. +|.++ ++++|++.++|+||++++||||||||||+|+|+|.
T Consensus 328 ~~i~---llv~~iP~~Lp~~vti~l~~~~~------~mak~----~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~ 394 (1028)
T 2zxe_A 328 FLIG---IIVANVPEGLLATVTVCLTLTAK------RMARK----NCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVA 394 (1028)
T ss_dssp HHHH---HHHHHSCTTHHHHHHHHHHHHHH------HHHTT----TEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEE
T ss_pred HHHH---HHHHHcCchHHHHHHHHHHHHHH------HHhhC----CceeccchHhhhhcCceEEeccCCCCCCCCeEEEE
Confidence 3332 45567999999999988888876 45444 48999999999999999999999999999999999
Q ss_pred EEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCc---eeeecCCccHHHHHHHHHhCCe
Q 003364 395 RCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGA---ILYKAQSQDEEALVHAAAQLHM 471 (826)
Q Consensus 395 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~---~~~~~~~~~e~all~~a~~~~~ 471 (826)
+++..+..|..+....... ......++....++.++++||++......++. -....+||+|.|+++++++.+.
T Consensus 395 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~ 470 (1028)
T 2zxe_A 395 HMWFDNQIHEADTTENQSG----AAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCG 470 (1028)
T ss_dssp EEEETTEEEECCCCTTCCS----CCCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHS
T ss_pred EEEECCeeeeccCCCCccc----cccccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCC
Confidence 9999877664321110000 00111234456788899999987654322110 1123689999999999987532
Q ss_pred EEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecC--CCeEEEEecCchhhhhhhhhcC-----------C
Q 003364 472 VLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCH--SGNISLLSKGADEAILPYAHAG-----------Q 538 (826)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~--~~~~~~~~KGa~e~i~~~~~~~-----------~ 538 (826)
.. .+.+..|+++..+||+|.||||+++++... ++++++|+|||||.|+++|... .
T Consensus 471 ~~------------~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~ 538 (1028)
T 2zxe_A 471 SV------------QGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKED 538 (1028)
T ss_dssp CH------------HHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHH
T ss_pred CH------------HHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHH
Confidence 10 111234678889999999999999998742 5778999999999999999731 1
Q ss_pred ChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCch
Q 003364 539 QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGV 618 (826)
Q Consensus 539 ~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~ 618 (826)
.++.+.+.+++++.+|+||+++|||.++.++++++. .. +.+ .....|.|++|+|+++++|++||++
T Consensus 539 ~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~--------~~-~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~ 604 (1028)
T 2zxe_A 539 MKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGY--------PF-DAD-----EPNFPTTDLCFVGLMAMIDPPRAAV 604 (1028)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTC--------CC-CTT-----TTCSCCSSEEEEEEEEEECCBCTTH
T ss_pred HHHHHHHHHHHHHhcCCEEEEEEEEecCcccccccc--------cc-chh-----hhhhhhcCeEEEeeeccCCCCChhH
Confidence 235678889999999999999999999764321100 00 000 0023478999999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccc-cCCCCceEEEE
Q 003364 619 PETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRIT-TSEPKDVAFVV 697 (826)
Q Consensus 619 ~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~ 697 (826)
+++|++|+++||+++|+|||+..+|.++|+++||...+.. ...+.... . ..... .........++
T Consensus 605 ~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~---------~i~~~~~~----~-~~~~~~~~~~~~~~~vi 670 (1028)
T 2zxe_A 605 PDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNE---------TIEDIAAR----L-NIPIGQVNPRDAKACVV 670 (1028)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCC---------CHHHHHHH----T-TCCGGGSCGGGCCEEEE
T ss_pred HHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCch---------hHHHHHhh----c-CcchhhccccccceEEE
Confidence 9999999999999999999999999999999999754322 11111100 0 00000 00111234566
Q ss_pred cChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecC-CchHH
Q 003364 698 DGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG-REGLQ 776 (826)
Q Consensus 698 ~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g-n~~~~ 776 (826)
+|..+..+.++. +..+.......+|+|++|.+|..+++.+++.++.|+|+|||.||+|||+.||+|||| | |+.+.
T Consensus 671 ~G~~l~~~~~~~---l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAm-g~~gtd~ 746 (1028)
T 2zxe_A 671 HGSDLKDLSTEV---LDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM-GISGSDV 746 (1028)
T ss_dssp EHHHHTTCCHHH---HHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE-SSSCCHH
T ss_pred EcHHhhhCCHHH---HHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEe-CCccCHH
Confidence 666554332211 111111123469999999999999999999999999999999999999999999999 7 67777
Q ss_pred HHhhccccccc--hhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHh
Q 003364 777 AARAADYSIGK--FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFI 823 (826)
Q Consensus 777 ~~~~Ad~v~~~--~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~ 823 (826)
++++||+++.+ +..+.+ .+.+||++|.|+++++.|.+++|+...+.
T Consensus 747 ak~aAD~Vl~~~~~~~I~~-~i~~gR~i~~ni~k~i~~~l~~n~~~~~~ 794 (1028)
T 2zxe_A 747 SKQAADMILLDDNFASIVT-GVEEGRLIFDNLKKSIAYTLTSNIPEITP 794 (1028)
T ss_dssp HHHHCSEEETTCCTHHHHH-HHHHHHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred HHHhcCEEecCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999954 666777 46799999999999999999999865443
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-90 Score=837.99 Aligned_cols=694 Identities=22% Similarity=0.259 Sum_probs=508.1
Q ss_pred CccccccCCCceEEeecc-cccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccC--cccch---hhhhhhhhhhhhH
Q 003364 10 DETSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVN--PASTW---GPLIFIFAVSATK 83 (826)
Q Consensus 10 ~~~r~~~~g~N~i~~~~~-~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~--~~~~~---~~l~~i~~~~~~~ 83 (826)
.++|+++||+|+++.+++ ++| +.|++||+++++++++++++++++..+...+ +...| ..++++++++.++
T Consensus 30 ~~~r~~~~G~N~l~~~~~~~~~----~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i 105 (995)
T 3ar4_A 30 VKRHLEKYGHNELPAEEGKSLW----ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIV 105 (995)
T ss_dssp HHHHHHHHCCSSCCCCCCCCHH----HHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCccCCCCCCcHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHhHHhhHHHHHHHHH
Confidence 466999999999999765 566 8999999999999999999998876543311 11122 2334455567778
Q ss_pred HHHHHHHhhhh---hHhhcceEEEEEeCCe--EEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCC
Q 003364 84 EAWDDYNRYLS---DKKANEKEVWVVKQGI--KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDG 158 (826)
Q Consensus 84 ~~~~~~~~~~~---~~~~~~~~~~V~r~g~--~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTG 158 (826)
+.++++++.++ ++++.+.+++|+|||+ +++|++++|+|||||.|++||+|||||+|++.+ .|.|.||||+|||
T Consensus 106 ~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~--s~~l~VdeS~LTG 183 (995)
T 3ar4_A 106 GVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIK--STTLRVDQSILTG 183 (995)
T ss_dssp HHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEC--SSCEEEECHHHHC
T ss_pred HHHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccccEEEEEEe--eceEEEEcccccC
Confidence 99999986554 5567789999999987 699999999999999999999999999997543 3559999999999
Q ss_pred CCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEE
Q 003364 159 ETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVA 238 (826)
Q Consensus 159 Es~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V 238 (826)
||.|+.|.+.+.. +++....+.+|.+|+||.+.+| ++.++|
T Consensus 184 ES~pv~K~~~~~~--------------------------------------~~~~~~~~~~~~v~~GT~v~~G-~~~~~V 224 (995)
T 3ar4_A 184 ESVSVIKHTEPVP--------------------------------------DPRAVNQDKKNMLFSGTNIAAG-KALGIV 224 (995)
T ss_dssp CCSCEEECCSCCC--------------------------------------CTTCCGGGCTTEECTTCEEEEC-EEEEEE
T ss_pred CCcceeccccccC--------------------------------------CcccCcccccceEecCCEEEcc-eEEEEE
Confidence 9999999754210 1112234678999999999999 899999
Q ss_pred EEeCCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhh-
Q 003364 239 VYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLV- 314 (826)
Q Consensus 239 ~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 314 (826)
++||.+|.+|++.+ ..+.+++|+++.+++++.++.++++++++++++++..+.... .....|...+.
T Consensus 225 ~~tG~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 295 (995)
T 3ar4_A 225 ATTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDP---------VHGGSWIRGAIY 295 (995)
T ss_dssp EECGGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSC---------SSSSCHHHHHHH
T ss_pred EEcCcchHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---------cccchHHHHHHH
Confidence 99999999998654 466788999999999999988888777776665543211000 01111222111
Q ss_pred hhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEE
Q 003364 315 IPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFR 394 (826)
Q Consensus 315 ~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~ 394 (826)
.+...+.+++.++|++||++++++...+.. +|.++ ++++|++.++|+||++++||||||||||+|+|+|.
T Consensus 296 ~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~------~ma~~----~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~ 365 (995)
T 3ar4_A 296 YFKIAVALAVAAIPEGLPAVITTCLALGTR------RMAKK----NAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVC 365 (995)
T ss_dssp HHHHHHHHHHHHSCTTHHHHHHHHHHHHHH------HHHHT----TEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEE
T ss_pred HHHHHHHHHHHhcCcchHHHHHHHHHHHHH------HhccC----CcEeccchhhhhhcCceEEEecCCCCcccCceEEE
Confidence 111223356778999999888888777766 45444 48999999999999999999999999999999999
Q ss_pred EEEEcCeeecCC--------CCCcccch-hhhh----hhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHH
Q 003364 395 RCCIGGIFYGNE--------TGDALKDV-GLLN----AITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEA 461 (826)
Q Consensus 395 ~i~~~~~~~~~~--------~~~~~~~~-~~~~----~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~a 461 (826)
+++..+..++.+ ++....+. +... .....++....++.++++||++.+...+++......++|+|.|
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~A 445 (995)
T 3ar4_A 366 KMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETA 445 (995)
T ss_dssp EEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHH
T ss_pred EEEecCcccCcccccceeeccCCCcCCccccccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHH
Confidence 998765332210 00000000 0000 0011234467788899999987654322222223458999999
Q ss_pred HHHHHHhCCeEEEeecCceEEEEe------CCeEEEEEEEEeeccCCCCCceEEEEEecCCC----eEEEEecCchhhhh
Q 003364 462 LVHAAAQLHMVLVNKNASILEIKF------NGSVLQYEILETLEFTSDRKRMSVVVKDCHSG----NISLLSKGADEAIL 531 (826)
Q Consensus 462 ll~~a~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~----~~~~~~KGa~e~i~ 531 (826)
+++++++.|+ +...... +.... ......|++++.+||+|+||||+|+++..+++ ++.+|+||+||.|+
T Consensus 446 l~~~a~~~g~-~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il 523 (995)
T 3ar4_A 446 LTTLVEKMNV-FNTEVRN-LSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVI 523 (995)
T ss_dssp HHHHHHHHCT-TCCCCTT-SCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHH
T ss_pred HHHHHHHcCC-ccccccc-cccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHH
Confidence 9999988775 1110000 00000 00134588999999999999999999975431 57999999999999
Q ss_pred hhhhcC-----------CChhHHHHHHHHH--HHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHh
Q 003364 532 PYAHAG-----------QQTRTFVEAVEQY--SQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRL 598 (826)
Q Consensus 532 ~~~~~~-----------~~~~~~~~~~~~~--~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (826)
++|+.. ..++.+.+.++++ +.+|+||+++|||.++..+.. ....+ ...+..+
T Consensus 524 ~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~----------~~~~~-----~~~~~~~ 588 (995)
T 3ar4_A 524 DRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREE----------MVLDD-----SSRFMEY 588 (995)
T ss_dssp HTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGGG----------CCTTC-----GGGHHHH
T ss_pred HhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCccccc----------ccccc-----chhhhhh
Confidence 999631 1234577888899 999999999999998642100 00000 0123567
Q ss_pred ccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHH
Q 003364 599 EHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLER 678 (826)
Q Consensus 599 e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (826)
|+|++|+|+++++|++|++++++|++|+++||+++|+|||+..+|.++|+++|+...... + .+
T Consensus 589 e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~--i---~~------------ 651 (995)
T 3ar4_A 589 ETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEE--V---AD------------ 651 (995)
T ss_dssp TCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCC--C---TT------------
T ss_pred ccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCc--c---cc------------
Confidence 899999999999999999999999999999999999999999999999999999764321 0 00
Q ss_pred HHHHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHH
Q 003364 679 VLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVR 758 (826)
Q Consensus 679 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ 758 (826)
.+++|..++.+..+. +.+ ......+|+|++|++|.++|+.++..++.|+|+|||.||++
T Consensus 652 ----------------~~~~g~~~~~l~~~~---~~~--~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~ 710 (995)
T 3ar4_A 652 ----------------RAYTGREFDDLPLAE---QRE--ACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAP 710 (995)
T ss_dssp ----------------TEEEHHHHHTSCHHH---HHH--HHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHH
T ss_pred ----------------eEEEchhhhhCCHHH---HHH--HHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHH
Confidence 022232222111110 111 11236799999999999999999999999999999999999
Q ss_pred hHHhCCccEEecCCchHHHHhhcccccc--chhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHhh
Q 003364 759 MIQKADIGVGISGREGLQAARAADYSIG--KFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQ 824 (826)
Q Consensus 759 ml~~A~vgIam~gn~~~~~~~~Ad~v~~--~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~ 824 (826)
||+.||+|||| |++.+.++++||+++. ++..+.+. +.+||++|+|+++++.|++++|+...++.
T Consensus 711 alk~Advgiam-g~g~~~ak~aAd~vl~~~~~~~i~~~-i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~ 776 (995)
T 3ar4_A 711 ALKKAEIGIAM-GSGTAVAKTASEMVLADDNFSTIVAA-VEEGRAIYNNMKQFIRYLISSNVGEVVCI 776 (995)
T ss_dssp HHHHSTEEEEE-TTSCHHHHHTCSEEETTCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCeEEEe-CCCCHHHHHhCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 7777777889999994 56777773 67999999999999999999998655443
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-88 Score=799.59 Aligned_cols=597 Identities=19% Similarity=0.234 Sum_probs=466.1
Q ss_pred CccccccCCCceEEeecccccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHHHH
Q 003364 10 DETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDY 89 (826)
Q Consensus 10 ~~~r~~~~g~N~i~~~~~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 89 (826)
.++|+++||+|+++.+++++| ..|+++|.+|++++++++++++++.. .+.....++++++++.++++++++
T Consensus 93 a~~r~~~~G~N~l~~~~~~~~----~~~l~~f~~~~~~ll~~aai~s~~~g-----~~~~~~~i~~vv~i~~~i~~~qe~ 163 (920)
T 1mhs_A 93 VVQRRRKYGLNQMKEEKENHF----LKFLGFFVGPIQFVMEGAAVLAAGLE-----DWVDFGVICGLLLLNAVVGFVQEF 163 (920)
T ss_dssp HHHHHHHTSSSSCCCCCCSSH----HHHTHHHHHHHHHHHHHHHHHCTTCS-----CSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456999999999998888877 78899999999888877777776542 222334445566778889999999
Q ss_pred HhhhhhH---hhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeee
Q 003364 90 NRYLSDK---KANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL 166 (826)
Q Consensus 90 ~~~~~~~---~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~ 166 (826)
++.++.+ ++.+.+++|+|||++++|++++|+|||||.|++||+|||||+|+++++ .+.||||+|||||.|+.|
T Consensus 164 ~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~---~l~VDES~LTGES~PV~K- 239 (920)
T 1mhs_A 164 QAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDA---FLQVDQSALTGESLAVDK- 239 (920)
T ss_dssp HHHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESS---CCEEBCTTTSSCCCCEEC-
T ss_pred HHHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCc---eeeeeccccCCCCcceEe-
Confidence 9877654 445678999999999999999999999999999999999999995431 269999999999999999
Q ss_pred ccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcce
Q 003364 167 IPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETK 246 (826)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T~ 246 (826)
..+|.+|+||.+.+| .+.++|++||.+|.
T Consensus 240 --------------------------------------------------~~gd~v~sGT~v~~G-~~~~~V~~tG~~T~ 268 (920)
T 1mhs_A 240 --------------------------------------------------HKGDQVFASSAVKRG-EAFVVITATGDNTF 268 (920)
T ss_dssp --------------------------------------------------CSSCEECSCBCCSCC-CEEEEEEECSTTCS
T ss_pred --------------------------------------------------cCCCeeecCceEecc-eEEEEEEEeCCcCH
Confidence 346789999999999 79999999999999
Q ss_pred eeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhhHHHHHh
Q 003364 247 LGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLC 323 (826)
Q Consensus 247 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 323 (826)
+|++.+ ..+.+++++++.++++..+++++++++++++++.++ + ...++...+..++ .++
T Consensus 269 ~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~-----------~----~~~~~~~~l~~av---~ll 330 (920)
T 1mhs_A 269 VGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSF-----------Y----RSNPIVQILEFTL---AIT 330 (920)
T ss_dssp TTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-----------T----TTCCHHHHHHHHH---HHH
T ss_pred HHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------h----cCCcHHHHHHHHH---HHH
Confidence 999755 355678999999999998887777666655544321 1 1123334433322 355
Q ss_pred cccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCeee
Q 003364 324 SIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFY 403 (826)
Q Consensus 324 ~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~ 403 (826)
..++|++||+++.++...+.. +|.++ ++++|++.++|+||++|+||||||||||+|+|+|.+++..+..
T Consensus 331 V~aiP~aLp~~vti~la~g~~------~mak~----~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~- 399 (920)
T 1mhs_A 331 IIGVPVGLPAVVTTTMAVGAA------YLAKK----KAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGV- 399 (920)
T ss_dssp HHHSCCCHHHHHHHHHHHHHH------HHHHT----TCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSCC-
T ss_pred HHhCchhHHHHHHHHHHHHHH------HHHhC----CeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCCC-
Confidence 678999999877777766665 34433 3889999999999999999999999999999999887542110
Q ss_pred cCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEeecCceEEE
Q 003364 404 GNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEI 483 (826)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~~ 483 (826)
++ .+++.+.++|+... . ..+||+|.|+++++.+.+..
T Consensus 400 --------------------~~--~~ll~~a~l~~~~~----~------~~~~P~e~Al~~~~~~~~~~----------- 436 (920)
T 1mhs_A 400 --------------------DP--EDLMLTACLAASRK----K------KGIDAIDKAFLKSLKYYPRA----------- 436 (920)
T ss_dssp --------------------CC--THHHHHHHHSCCCS----S------CSCCSHHHHHHHHHHHSSSC-----------
T ss_pred --------------------CH--HHHHHHHHHhcCCc----c------cCCChHHHHHHHHHHhcccc-----------
Confidence 01 13455666776432 0 02499999999999876531
Q ss_pred EeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcCC-----ChhHHHHHHHHHHHcCCeEE
Q 003364 484 KFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQ-----QTRTFVEAVEQYSQLGLRTL 558 (826)
Q Consensus 484 ~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~~-----~~~~~~~~~~~~~~~G~rvl 558 (826)
.+....|++++.+||++.+|+|+++++.. +++.++|+||+||.++++|.... .++.+.+.+++++.+|+||+
T Consensus 437 --~~~~~~~~~~~~~pF~s~~k~ms~iv~~~-~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL 513 (920)
T 1mhs_A 437 --KSVLSKYKVLQFHPFDPVSKKVVAVVESP-QGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSL 513 (920)
T ss_dssp --CGGGSCCCEEEEEEEETTTTEEEEEECCS-SSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCC
T ss_pred --hhhccccceeEEeeccCCCCeEEEEEEeC-CCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEE
Confidence 11123467888999999999999999764 56778999999999999997421 13457788999999999999
Q ss_pred EEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCC
Q 003364 559 CLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGD 638 (826)
Q Consensus 559 ~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd 638 (826)
++|||.. |.+++|+|+++++|++||+++++|++|+++||+++|+|||
T Consensus 514 ~vA~~~~---------------------------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD 560 (920)
T 1mhs_A 514 GVARKRG---------------------------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGD 560 (920)
T ss_dssp EECCCSS---------------------------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESS
T ss_pred EEEEecc---------------------------------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCC
Confidence 9998631 3689999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhcc
Q 003364 639 KQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAI 718 (826)
Q Consensus 639 ~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 718 (826)
+..+|.++|+++||....-...-+.+.|... +++.. +. ..
T Consensus 561 ~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~---------------------------~~~~e-----------l~--~~ 600 (920)
T 1mhs_A 561 AVGIARETSRQLGLGTNIYNAERLGLGGGGD---------------------------MPGSE-----------VY--DF 600 (920)
T ss_dssp CHHHHHHHHHHHTSSCSCCCSSSSSSCBCCC---------------------------GGGGG-----------GG--TT
T ss_pred CHHHHHHHHHHcCCCccccCccceeecCccc---------------------------CCHHH-----------HH--HH
Confidence 9999999999999964210000000111100 00000 00 11
Q ss_pred ccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhcccccc--chhcchhhee
Q 003364 719 LSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIG--KFRFLKRLIL 796 (826)
Q Consensus 719 ~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~--~~~~l~~l~l 796 (826)
.....+|+|++|+||.++|+.+++.++.|+|+|||.||+|||+.||+|||| |++.+.++++||+++. ++..+.. .+
T Consensus 601 ~~~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAm-g~gtd~ak~aADiVl~~~~~~~I~~-ai 678 (920)
T 1mhs_A 601 VEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAV-EGSSDAARSAADIVFLAPGLGAIID-AL 678 (920)
T ss_dssp TTTTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEE-TTSCHHHHHSSSEEESSCCSHHHHH-HH
T ss_pred HhhCeEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCccc-ccccHHHHHhcCeEEcCCCHHHHHH-HH
Confidence 334578999999999999999999999999999999999999999999999 7776777779999984 5566666 47
Q ss_pred ecchhhHHHHHHHHHHHhhhhHHH
Q 003364 797 VHGRYSYNRTAFLSQYSFYKSLLI 820 (826)
Q Consensus 797 ~~gr~~~~~~~~~~~~~~~~~~~~ 820 (826)
.+||++|+|+++++.|.++.|+.+
T Consensus 679 ~~gR~~~~ni~k~i~~~l~~n~~~ 702 (920)
T 1mhs_A 679 KTSRQIFHRMYAYVVYRIALSIHL 702 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999999999999999999865
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-88 Score=800.71 Aligned_cols=607 Identities=19% Similarity=0.225 Sum_probs=462.9
Q ss_pred CccccccCCCceEEeecccccccccHHHHHHhhhHHHHHHHHHHHHhhccCccc--cCcccchhhhhhhhhhhhhHHHHH
Q 003364 10 DETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITP--VNPASTWGPLIFIFAVSATKEAWD 87 (826)
Q Consensus 10 ~~~r~~~~g~N~i~~~~~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~--~~~~~~~~~l~~i~~~~~~~~~~~ 87 (826)
.++|+++||+|+++.+++++| ..|+++|.+|++++++++++++++..... ...+.....++++++++.++++++
T Consensus 38 ~~~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~q 113 (885)
T 3b8c_A 38 GEDRIQIFGPNKLEEKKESKL----LKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIE 113 (885)
T ss_dssp HHHHSSSCCSCCTTTTCCCTT----SSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHHHHHHHTTTTTTTTTTT
T ss_pred HHHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 356999999999998887777 56788999999888888888887654211 012222344555566777889999
Q ss_pred HHHhhhhh---HhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCcee
Q 003364 88 DYNRYLSD---KKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKT 164 (826)
Q Consensus 88 ~~~~~~~~---~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~ 164 (826)
++++.++. +++.+++++|+|||++++|++++|+|||||.|++||+|||||+|+++++ +.||||+|||||.|+.
T Consensus 114 e~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~----l~VdES~LTGES~Pv~ 189 (885)
T 3b8c_A 114 ENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP----LKVDQSALTGESLPVT 189 (885)
T ss_dssp TTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC----BCCCCCSTTCCSSCCC
T ss_pred HHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEcCc----ccccccccCCCCcceE
Confidence 98876654 4556789999999999999999999999999999999999999994432 5899999999999999
Q ss_pred eeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCc
Q 003364 165 RLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNE 244 (826)
Q Consensus 165 K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~ 244 (826)
|. .+|.+|+||.+.+| ++.++|++||.+
T Consensus 190 K~---------------------------------------------------~g~~v~~GT~v~~G-~~~~~V~~tG~~ 217 (885)
T 3b8c_A 190 KH---------------------------------------------------PGQEVFSGSTCKQG-EIEAVVIATGVH 217 (885)
T ss_dssp BS---------------------------------------------------SCCCCCSCCCCCSC-CCCCBCCSCTTT
T ss_pred ec---------------------------------------------------CCCccccCeEEeee-EEEEEEEEcCcc
Confidence 93 45789999999999 799999999999
Q ss_pred ceeeccCCC--CCCccchHHHHHHHHHHHHHHHHHH-HHHHHHhhcchhccccccccceeeCCCCCccchhhhhhhHHHH
Q 003364 245 TKLGMTRGI--PEPKLTAVDAMIDKLTGAIFVFQIV-VVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFEL 321 (826)
Q Consensus 245 T~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (826)
|.+|++.+. ...+++++++.+++++.+++.++++ +++++++.++. ...+|...+. .++.
T Consensus 218 T~~g~i~~lv~~~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~---~~v~ 279 (885)
T 3b8c_A 218 TFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPI---------------QRRKYRDGID---NLLV 279 (885)
T ss_dssp TTSTTCCCSCCSCSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTT---------------TCSCSTTHHH---HHHH
T ss_pred cHHHHHHHHHhcccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------ccCcHHHHHH---HHHH
Confidence 999987653 2467899999999998764443322 22222222211 0112333332 3344
Q ss_pred HhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCe
Q 003364 322 LCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGI 401 (826)
Q Consensus 322 l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~ 401 (826)
++..++|++||++++++..++.. +|.+++ +++|++.++|+||++|+||||||||||+|+|+|.+.++.
T Consensus 280 llv~aiP~aLp~~vti~la~g~~------r~ak~~----ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~-- 347 (885)
T 3b8c_A 280 LLIGGIPIAMPTVLSVTMAIGSH------RLSQQG----AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE-- 347 (885)
T ss_dssp HTTTTCCSSTTTHHHHTTTHHHH------HHTTTS----CCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--
T ss_pred HHHHHhhhHHHHHHHHHHHHHHH------HHHhCC----eEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--
Confidence 67889999999888777666655 555444 899999999999999999999999999999999642210
Q ss_pred eecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEeecCceE
Q 003364 402 FYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASIL 481 (826)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~ 481 (826)
.+.. ..+..+++...++|+... ++||.|.|+++++.+..
T Consensus 348 ~~~~------------------~~~~~~ll~~aa~~~~~~------------~~~p~~~Al~~~~~~~~----------- 386 (885)
T 3b8c_A 348 VFCK------------------GVEKDQVLLFAAMASRVE------------NQDAIDAAMVGMLADPK----------- 386 (885)
T ss_dssp SSCS------------------STTHHHHHHHHHHHCCSS------------SCCSHHHHHHHTTCCTT-----------
T ss_pred ccCC------------------CCCHHHHHHHHHHHhCCC------------CCCchHHHHHHHhhchh-----------
Confidence 0100 011235566777787531 47999999999875311
Q ss_pred EEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhc-CCChhHHHHHHHHHHHcCCeEEEE
Q 003364 482 EIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA-GQQTRTFVEAVEQYSQLGLRTLCL 560 (826)
Q Consensus 482 ~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~-~~~~~~~~~~~~~~~~~G~rvl~~ 560 (826)
.....++.++.+||++.+|||+++++.. +|+.++|+||+||.++++|.. ...++.+.+.+++++.+|+||+++
T Consensus 387 -----~~~~~~~~~~~~pF~s~~k~~sv~~~~~-~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~v 460 (885)
T 3b8c_A 387 -----EARAGIREVHFLPFNPVDKRTALTYIDG-SGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAV 460 (885)
T ss_dssp -----CCCCSSCCBCCCCCCTTTCCCCCBBCSS-SSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEE
T ss_pred -----hHhhcCceeecccCCcccceEEEEEEec-CCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEE
Confidence 1122355678899999999999988764 567789999999999999974 334667889999999999999999
Q ss_pred EEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCCh
Q 003364 561 AWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQ 640 (826)
Q Consensus 561 A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~ 640 (826)
||+.++.++. +..|++++|+|+++++||+||+++++|++|+++||+++|+|||+.
T Consensus 461 A~~~~~~~~~-------------------------~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~ 515 (885)
T 3b8c_A 461 ARQVVPEKTK-------------------------ESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQL 515 (885)
T ss_dssp CCBCCCSSSS-------------------------SCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCH
T ss_pred EEeccccccc-------------------------cccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCCh
Confidence 9998865310 235689999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhcccc
Q 003364 641 NTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720 (826)
Q Consensus 641 ~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 720 (826)
.+|.++|+++||......... +.|.+.++ . ++...++.. ..
T Consensus 516 ~tA~~iA~~lGi~~~~~~~~~--l~g~~~~~----------------~--------~~~~~l~~~-------------~~ 556 (885)
T 3b8c_A 516 AIGKETGRRLGMGTNMYPSSA--LLGTHKDA----------------N--------LASIPVEEL-------------IE 556 (885)
T ss_dssp HHHTHHHHTTTCTTCCSTTSS--CCBGGGGT----------------T--------SCCSCHHHH-------------HH
T ss_pred HHHHHHHHHhCCccccCCcce--eecccccc----------------c--------cchhHHHHH-------------Hh
Confidence 999999999999643111000 11111100 0 000111111 12
Q ss_pred ceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccc--hhcchhheeec
Q 003364 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK--FRFLKRLILVH 798 (826)
Q Consensus 721 ~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~--~~~l~~l~l~~ 798 (826)
...+|++++|+||.++|+.++..++.|+|+|||.||+|||+.||+|||| |++.+.++++||+++.+ +..+.. .+.+
T Consensus 557 ~~~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAm-g~gtd~ak~aADivl~~~~~~~I~~-ai~~ 634 (885)
T 3b8c_A 557 KADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAV-ADATDAARGASDIVLTEPGLSVIIS-AVLT 634 (885)
T ss_dssp TSCCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCC-SSSHHHHGGGCSSCCSSCSHHHHTH-HHHT
T ss_pred hCcEEEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEe-CCccHHHHHhcceeeccCchhHHHH-HHHH
Confidence 3568999999999999999999999999999999999999999999999 77766677799999954 455555 4679
Q ss_pred chhhHHHHHHHHHHHhhhhHH
Q 003364 799 GRYSYNRTAFLSQYSFYKSLL 819 (826)
Q Consensus 799 gr~~~~~~~~~~~~~~~~~~~ 819 (826)
||.+|+|+++++.|.+..|+.
T Consensus 635 gR~~~~ni~~~i~~~l~~n~~ 655 (885)
T 3b8c_A 635 SRAIFQRMKNYTIYAVSITIR 655 (885)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999874
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-71 Score=638.28 Aligned_cols=493 Identities=19% Similarity=0.223 Sum_probs=390.6
Q ss_pred hhhhhhhhhhHHHHHHHHhhhh------hHhhcceEEEEEe-CCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCC
Q 003364 73 LIFIFAVSATKEAWDDYNRYLS------DKKANEKEVWVVK-QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDP 145 (826)
Q Consensus 73 l~~i~~~~~~~~~~~~~~~~~~------~~~~~~~~~~V~r-~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~ 145 (826)
..+++++..+..+++.+.+.++ +.++.+.+++++| ||++++|++++|+|||+|.|++||+|||||+|+
T Consensus 191 a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl----- 265 (736)
T 3rfu_A 191 AAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQ----- 265 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEEC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEE-----
Confidence 3344444455566666655442 3455688999988 999999999999999999999999999999999
Q ss_pred CceEEEEcCCCCCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeec
Q 003364 146 QGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQS 225 (826)
Q Consensus 146 ~G~~~Vdes~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~G 225 (826)
+|.+.||||+|||||.|+.|. .++.+++|
T Consensus 266 ~G~~~VDES~LTGES~Pv~K~---------------------------------------------------~gd~v~~G 294 (736)
T 3rfu_A 266 EGRSFVDESMVTGEPIPVAKE---------------------------------------------------ASAKVIGA 294 (736)
T ss_dssp SSCEEEECSSSTTCSSCEEEC---------------------------------------------------TTCEECTT
T ss_pred ECceEeeecccCCccccEEec---------------------------------------------------cCCcCCCc
Confidence 888999999999999999993 46679999
Q ss_pred ceeecCceEEEEEEEeCCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceee
Q 003364 226 CYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVL 302 (826)
Q Consensus 226 t~v~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 302 (826)
|.+.+| .+.+.|++||.+|.++++.+ ..+.+++++++.+++++.++++++++++++++++|+++..
T Consensus 295 t~~~~G-~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~---------- 363 (736)
T 3rfu_A 295 TINQTG-SFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGP---------- 363 (736)
T ss_dssp CEEESC-CCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCS----------
T ss_pred eEeccc-eEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----------
Confidence 999998 79999999999999998655 4566789999999999999999999888888777544321
Q ss_pred CCCCCccchhhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecC
Q 003364 303 YPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDK 382 (826)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DK 382 (826)
...|...+..++ .++..++|++|++++.++...+.. ++.+ +++++|++.++|+||++|+|||||
T Consensus 364 ---~~~~~~~l~~ai---~vlviacPcaL~la~p~a~~~~~~------~~a~----~gilvk~~~alE~l~~v~~i~fDK 427 (736)
T 3rfu_A 364 ---QPALSYGLIAAV---SVLIIACPCALGLATPMSIMVGVG------KGAQ----SGVLIKNAEALERMEKVNTLVVDK 427 (736)
T ss_dssp ---SSSTTHHHHHHH---HHHHHHCCSTHHHHHHHHHHHHHH------HHHH----TTEEESCHHHHHHHTSCCEEEECC
T ss_pred ---CchHHHHHHHHH---HhHHHhhhhHHHHHHHHHHHHHHH------HHhh----cceeechHHHHHHhcCCCEEEEeC
Confidence 111233333222 345667888887777666655554 2222 359999999999999999999999
Q ss_pred CcccccceeeEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHH
Q 003364 383 TGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEAL 462 (826)
Q Consensus 383 TGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~al 462 (826)
|||||+|+|.|.+++.++. +..+++...+.+. +.+.||.++|+
T Consensus 428 TGTLT~g~~~v~~i~~~~~------------------------~~~~~l~~aa~le-------------~~s~hPla~Ai 470 (736)
T 3rfu_A 428 TGTLTEGHPKLTRIVTDDF------------------------VEDNALALAAALE-------------HQSEHPLANAI 470 (736)
T ss_dssp BTTTBCSSCEEEEEEESSS------------------------CHHHHHHHHHHHH-------------HSSCCHHHHHH
T ss_pred CCCCcCCceEEEEEEecCC------------------------CHHHHHHHHHHHh-------------hcCCChHHHHH
Confidence 9999999999999873221 0112222211111 22579999999
Q ss_pred HHHHHhCCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcCCChhH
Q 003364 463 VHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRT 542 (826)
Q Consensus 463 l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~ 542 (826)
++++++.++.+. ...+|++...+... ... +++. +.+|+++.+..... ....
T Consensus 471 v~~a~~~~~~~~---------------------~~~~f~~~~g~gv~-~~~--~g~~--~~~G~~~~~~~~~~---~~~~ 521 (736)
T 3rfu_A 471 VHAAKEKGLSLG---------------------SVEAFEAPTGKGVV-GQV--DGHH--VAIGNARLMQEHGG---DNAP 521 (736)
T ss_dssp HHHHHTTCCCCC---------------------CCSCCCCCTTTEEE-ECS--SSSC--EEEESHHHHHHHCC---CCHH
T ss_pred HHHHHhcCCCcc---------------------CcccccccCCceEE-EEE--CCEE--EEEcCHHHHHHcCC---ChhH
Confidence 999988765321 12356666655322 222 3332 45699988766532 3456
Q ss_pred HHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHH
Q 003364 543 FVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETI 622 (826)
Q Consensus 543 ~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI 622 (826)
+.+..++++.+|+|++++| .|.+++|+++++|++|++++++|
T Consensus 522 ~~~~~~~~~~~G~~vl~va--------------------------------------~d~~~~G~i~i~D~i~~~~~~aI 563 (736)
T 3rfu_A 522 LFEKADELRGKGASVMFMA--------------------------------------VDGKTVALLVVEDPIKSSTPETI 563 (736)
T ss_dssp HHHHHHHHHHTTCEEEEEE--------------------------------------ETTEEEEEEEEECCBCSSHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEE--------------------------------------ECCEEEEEEEeeccchhhHHHHH
Confidence 7788899999999999999 57899999999999999999999
Q ss_pred HHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhH
Q 003364 623 ETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWAL 702 (826)
Q Consensus 623 ~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 702 (826)
++|+++|++++|+|||+..++..+++++|+
T Consensus 564 ~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi-------------------------------------------------- 593 (736)
T 3rfu_A 564 LELQQSGIEIVMLTGDSKRTAEAVAGTLGI-------------------------------------------------- 593 (736)
T ss_dssp HHHHHHTCEEEEECSSCHHHHHHHHHHHTC--------------------------------------------------
T ss_pred HHHHHCCCeEEEECCCCHHHHHHHHHHcCC--------------------------------------------------
Confidence 999999999999999999999999999998
Q ss_pred HHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhcc
Q 003364 703 EIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAAD 782 (826)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad 782 (826)
..++++++|++|.++++.++..++.|+|+|||.||+|||+.||+|||| |++.+.++++||
T Consensus 594 -------------------~~v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAm-g~g~d~a~~~AD 653 (736)
T 3rfu_A 594 -------------------KKVVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAM-GTGTDVAIESAG 653 (736)
T ss_dssp -------------------CCEECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEE-SSSCSHHHHHCS
T ss_pred -------------------CEEEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEe-CCccHHHHHhCC
Confidence 346778999999999999999999999999999999999999999999 888888888999
Q ss_pred ccccc--hhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHh
Q 003364 783 YSIGK--FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFI 823 (826)
Q Consensus 783 ~v~~~--~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~ 823 (826)
+++.+ ++.+.+ .+..||.+++++++++.|++.+|++.+.+
T Consensus 654 ~vl~~~~~~~i~~-ai~~sr~t~~~i~qnl~~a~~yN~~~ipl 695 (736)
T 3rfu_A 654 VTLLHGDLRGIAK-ARRLSESTMSNIRQNLFFAFIYNVLGVPL 695 (736)
T ss_dssp EEECSCCSTTHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEccCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99954 445554 46679999999999999999999976654
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-69 Score=621.94 Aligned_cols=487 Identities=18% Similarity=0.210 Sum_probs=386.0
Q ss_pred hhhhhhhhHHHHHHHHhhh------hhHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCce
Q 003364 75 FIFAVSATKEAWDDYNRYL------SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGV 148 (826)
Q Consensus 75 ~i~~~~~~~~~~~~~~~~~------~~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~ 148 (826)
+++++..+..+++++.+.+ ++.++.+++++|+|||++++|++++|+|||+|.|++||+|||||+|+ +|.
T Consensus 101 ~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl-----~G~ 175 (645)
T 3j08_A 101 LLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVV-----EGE 175 (645)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEE-----ECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEE-----ECc
Confidence 3333445556666666543 35567889999999999999999999999999999999999999999 788
Q ss_pred EEEEcCCCCCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeeccee
Q 003364 149 CYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYL 228 (826)
Q Consensus 149 ~~Vdes~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v 228 (826)
+.||||+|||||.|+.| ..++.+++||.+
T Consensus 176 ~~VdeS~LTGES~Pv~K---------------------------------------------------~~g~~v~~Gt~~ 204 (645)
T 3j08_A 176 SYVDESMISGEPVPVLK---------------------------------------------------SKGDEVFGATIN 204 (645)
T ss_dssp EEEECHHHHCCSSCEEE---------------------------------------------------CTTCEECTTCEE
T ss_pred EEEEcccccCCCCceec---------------------------------------------------CCCCEeeccEEE
Confidence 99999999999999999 346789999999
Q ss_pred ecCceEEEEEEEeCCcceeeccC---CCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCC
Q 003364 229 RNTEWACGVAVYTGNETKLGMTR---GIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQ 305 (826)
Q Consensus 229 ~~g~~~~~~V~~tG~~T~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 305 (826)
.+| ++.+.|++||.+|.++++. +..+.+++++++.+++++.+++++++++++++++.|+.+.
T Consensus 205 ~~g-~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~-------------- 269 (645)
T 3j08_A 205 NTG-VLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA-------------- 269 (645)
T ss_dssp CSS-CEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCC--------------
T ss_pred ecC-cEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------
Confidence 998 8999999999999888754 4567788999999999999999988888887776643321
Q ss_pred CCccchhhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcc
Q 003364 306 EFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGT 385 (826)
Q Consensus 306 ~~~~~~~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGT 385 (826)
..++...+..++ .++..++|++|++++.++...+.. ++.+ +++++|++.++|+||++|++|||||||
T Consensus 270 ~~~~~~~~~~~i---~vlvia~P~aL~la~p~a~~~~~~------~~a~----~gilvk~~~~lE~lg~v~~i~fDKTGT 336 (645)
T 3j08_A 270 HAPLLFAFTTLI---AVLVVACPCAFGLATPTALTVGMG------KGAE----LGILIKNADALEVAEKVTAVIFDKTGT 336 (645)
T ss_dssp SCSCCCTTTTTH---HHHHHHSCTTHHHHHHHHHHHHHH------HHHT----TCCCCSSTTHHHHGGGCCEEEEEGGGT
T ss_pred CCcHHHHHHHHH---HHHHHHhhhHHHHHHHHHHHHHHH------HHHH----CCeEecCchHHHHhhCCCEEEEcCccc
Confidence 112223333223 245567888887777766666554 2333 358999999999999999999999999
Q ss_pred cccceeeEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHH
Q 003364 386 LTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHA 465 (826)
Q Consensus 386 LT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~ 465 (826)
||+|+|.|.+++..+. +..+++...+.|+ ..+.||.+.|++++
T Consensus 337 LT~~~~~v~~~~~~~~------------------------~~~~~l~~aa~~e-------------~~s~hPla~Aiv~~ 379 (645)
T 3j08_A 337 LTKGKPEVTDLVPLNG------------------------DERELLRLAAIAE-------------RRSEHPIAEAIVKK 379 (645)
T ss_dssp SSSSCCEEEEEEESSS------------------------CHHHHHHHHHHHH-------------TTCCSHHHHHHHHH
T ss_pred ccCCCeEEEEEEeCCC------------------------CHHHHHHHHHHHh-------------hcCCChhHHHHHHH
Confidence 9999999999986421 1123344444443 12579999999999
Q ss_pred HHhCCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcCCChhHHHH
Q 003364 466 AAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVE 545 (826)
Q Consensus 466 a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~ 545 (826)
+++.+........ |.+...+ .+.. ..+..|+++.+.+... ..++.+.+
T Consensus 380 a~~~g~~~~~~~~---------------------~~~~~g~-g~~~--------~~v~~g~~~~~~~~~~--~~~~~~~~ 427 (645)
T 3j08_A 380 ALEHGIELGEPEK---------------------VEVIAGE-GVVA--------DGILVGNKRLMEDFGV--AVSNEVEL 427 (645)
T ss_dssp HHHTTCCCCSCCC---------------------CEEETTT-EEEE--------TTEEEECHHHHHHTTC--CCCHHHHH
T ss_pred HHhcCCCcCCccc---------------------eEEecCC-ceEE--------EEEEECCHHHHHhcCC--CccHHHHH
Confidence 9988764321110 1100111 0110 1145688776654332 23567888
Q ss_pred HHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHH
Q 003364 546 AVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETL 625 (826)
Q Consensus 546 ~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l 625 (826)
.++++..+|+|++++| .|++++|+++++|+++|+++++|++|
T Consensus 428 ~~~~~~~~g~~~l~va--------------------------------------~~~~~~G~i~~~D~l~~~~~~~i~~L 469 (645)
T 3j08_A 428 ALEKLEREAKTAVIVA--------------------------------------RNGRVEGIIAVSDTLKESAKPAVQEL 469 (645)
T ss_dssp HHHHHHTTTCCCEEEE--------------------------------------ETTEEEEEEEEECCCTTTHHHHHHHH
T ss_pred HHHHHHhcCCeEEEEE--------------------------------------ECCEEEEEEEecCCchhHHHHHHHHH
Confidence 8999999999999999 58899999999999999999999999
Q ss_pred HHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHH
Q 003364 626 RKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIA 705 (826)
Q Consensus 626 ~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 705 (826)
+++|++++|+|||+..++..+++++|+
T Consensus 470 ~~~Gi~v~~~TGd~~~~a~~ia~~lgi----------------------------------------------------- 496 (645)
T 3j08_A 470 KRMGIKVGMITGDNWRSAEAISRELNL----------------------------------------------------- 496 (645)
T ss_dssp HHTTCEEEEECSSCHHHHHHHHHHHTC-----------------------------------------------------
T ss_pred HHCCCEEEEEeCCCHHHHHHHHHHcCC-----------------------------------------------------
Confidence 999999999999999999999999998
Q ss_pred HHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccc
Q 003364 706 LKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 785 (826)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~ 785 (826)
..+++++.|++|..+++.++.. +.|+|+|||.||++||+.||+|||| |++.+.++++||+++
T Consensus 497 ----------------~~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiam-g~g~~~a~~~AD~vl 558 (645)
T 3j08_A 497 ----------------DLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAV-GSGSDVAVESGDIVL 558 (645)
T ss_dssp ----------------SEEECSCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEE-CCCSCCSSCCSSSEE
T ss_pred ----------------CEEEEeCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEe-CCCcHHHHHhCCEEE
Confidence 3577889999999999999988 8999999999999999999999999 888888888999999
Q ss_pred --cchhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHhh
Q 003364 786 --GKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQ 824 (826)
Q Consensus 786 --~~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~ 824 (826)
++++.+.. .+.+||++++++++++.|++++|++.+.+.
T Consensus 559 ~~~~~~~i~~-~i~~~r~~~~~i~~nl~~a~~~N~~~i~la 598 (645)
T 3j08_A 559 IRDDLRDVVA-AIQLSRKTMSKIKQNIFWALIYNVILIPAA 598 (645)
T ss_dssp SSCCTTHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666 355799999999999999999999866553
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-69 Score=630.39 Aligned_cols=487 Identities=18% Similarity=0.212 Sum_probs=386.6
Q ss_pred hhhhhhhhhHHHHHHHHhhh------hhHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCc
Q 003364 74 IFIFAVSATKEAWDDYNRYL------SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQG 147 (826)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~~~------~~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G 147 (826)
++++++..+..+++++.+.+ ++.++.+.+++|+|||++++|++++|+|||+|.|++||+|||||+|+ +|
T Consensus 178 ~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl-----~G 252 (723)
T 3j09_A 178 VLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVV-----EG 252 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEE-----EC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEE-----EC
Confidence 33444445556666666543 34566789999999999999999999999999999999999999999 78
Q ss_pred eEEEEcCCCCCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecce
Q 003364 148 VCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCY 227 (826)
Q Consensus 148 ~~~Vdes~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~ 227 (826)
.+.||||+|||||.|+.| ..++.+++||.
T Consensus 253 ~~~VdeS~LTGES~pv~K---------------------------------------------------~~g~~v~~Gt~ 281 (723)
T 3j09_A 253 ESYVDESMISGEPVPVLK---------------------------------------------------SKGDEVFGATI 281 (723)
T ss_dssp CEEEECHHHHCCSSCEEE---------------------------------------------------CTTCEECTTCE
T ss_pred CeEEecccccCCCcceee---------------------------------------------------cCCCeeccceE
Confidence 899999999999999999 35678999999
Q ss_pred eecCceEEEEEEEeCCcceeeccC---CCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCC
Q 003364 228 LRNTEWACGVAVYTGNETKLGMTR---GIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYP 304 (826)
Q Consensus 228 v~~g~~~~~~V~~tG~~T~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 304 (826)
+.+| ++.+.|++||.+|.++++. +..+.+++++++.+++++.+++++++++++++++.|+.+.
T Consensus 282 ~~~g-~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~------------- 347 (723)
T 3j09_A 282 NNTG-VLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA------------- 347 (723)
T ss_dssp ECSS-CEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSST-------------
T ss_pred EecC-cEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------------
Confidence 9988 8999999999999888754 4567788999999999999999998888887776643321
Q ss_pred CCCccchhhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCc
Q 003364 305 QEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTG 384 (826)
Q Consensus 305 ~~~~~~~~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTG 384 (826)
..++...+. ..+.++..++|++|++++.++...+.. ++.+ +++++|++.++|+||++|+|||||||
T Consensus 348 -~~~~~~~~~---~~i~vlvia~P~aL~la~p~a~~~~~~------~~a~----~gilvk~~~~lE~lg~v~~i~fDKTG 413 (723)
T 3j09_A 348 -HAPLLFAFT---TLIAVLVVACPCAFGLATPTALTVGMG------KGAE----LGILIKNADALEVAEKVTAVIFDKTG 413 (723)
T ss_dssp -TCTTCCSHH---HHHHHHHHHSCTTHHHHHHHHHHHHHH------HHHT----TTCEESSTTHHHHGGGCCEEEEEHHH
T ss_pred -CCcHHHHHH---HHHHHHHhhhhHHHHHHHHHHHHHHHH------HHHH----CCeEEeChHHHHHhhcCCEEEEcCCC
Confidence 112222332 223355667888888777776666554 3333 35999999999999999999999999
Q ss_pred ccccceeeEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHH
Q 003364 385 TLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVH 464 (826)
Q Consensus 385 TLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~ 464 (826)
|||+|+|+|.+++..+. +..+++...+.|+ ..+.||.++|+++
T Consensus 414 TLT~g~~~v~~~~~~~~------------------------~~~~~l~~aa~~e-------------~~s~hP~~~Ai~~ 456 (723)
T 3j09_A 414 TLTKGKPEVTDLVPLNG------------------------DERELLRLAAIAE-------------RRSEHPIAEAIVK 456 (723)
T ss_dssp HTSCSCCEEEEEEESSS------------------------CHHHHHHHHHHHH-------------TTCCSHHHHHHHH
T ss_pred ccccCceEEEEEEeCCC------------------------CHHHHHHHHHHHh-------------ccCCCchhHHHHH
Confidence 99999999999986421 1123333333332 1257999999999
Q ss_pred HHHhCCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcCCChhHHH
Q 003364 465 AAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFV 544 (826)
Q Consensus 465 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~ 544 (826)
++.+.+........ |.....+ .+.. ..+..|+++.+.+... ..++.+.
T Consensus 457 ~a~~~~~~~~~~~~---------------------~~~~~g~-g~~~--------~~~~~g~~~~~~~~~~--~~~~~~~ 504 (723)
T 3j09_A 457 KALEHGIELGEPEK---------------------VEVIAGE-GVVA--------DGILVGNKRLMEDFGV--AVSNEVE 504 (723)
T ss_dssp HHHHTTCCCCSCCC---------------------CEEETTT-EEEE--------TTEEEECHHHHHHTTC--CCCHHHH
T ss_pred HHHhcCCCcCCccc---------------------eEEecCC-ceEE--------EEEEECCHHHHHhcCC--CccHHHH
Confidence 99988764321110 1100011 1110 1255688876655432 2356788
Q ss_pred HHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHH
Q 003364 545 EAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIET 624 (826)
Q Consensus 545 ~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~ 624 (826)
+.++++..+|+|++++| .|++++|+++++|+++|+++++|++
T Consensus 505 ~~~~~~~~~g~~~~~va--------------------------------------~~~~~~G~i~i~D~~~~~~~~~i~~ 546 (723)
T 3j09_A 505 LALEKLEREAKTAVIVA--------------------------------------RNGRVEGIIAVSDTLKESAKPAVQE 546 (723)
T ss_dssp HHHHHHHTTTCEEEEEE--------------------------------------ETTEEEEEEEEECCSCTTHHHHHHH
T ss_pred HHHHHHHhcCCeEEEEE--------------------------------------ECCEEEEEEeecCCcchhHHHHHHH
Confidence 88999999999999999 5889999999999999999999999
Q ss_pred HHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHH
Q 003364 625 LRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEI 704 (826)
Q Consensus 625 l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 704 (826)
|+++|++++|+|||+..++..+++++|+
T Consensus 547 l~~~Gi~v~~~TGd~~~~a~~ia~~lgi---------------------------------------------------- 574 (723)
T 3j09_A 547 LKRMGIKVGMITGDNWRSAEAISRELNL---------------------------------------------------- 574 (723)
T ss_dssp HHHTTCEEEEECSSCHHHHHHHHHHHTC----------------------------------------------------
T ss_pred HHHCCCEEEEECCCCHHHHHHHHHHcCC----------------------------------------------------
Confidence 9999999999999999999999999998
Q ss_pred HHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhcccc
Q 003364 705 ALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYS 784 (826)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v 784 (826)
..++++++|.+|..+++.++.. +.|+|+|||.||+|||+.||+|||| |++.+.++++||++
T Consensus 575 -----------------~~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiam-g~g~~~a~~~AD~v 635 (723)
T 3j09_A 575 -----------------DLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAV-GSGSDVAVESGDIV 635 (723)
T ss_dssp -----------------SEEECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEEC-CCCSCCSSCCSSEE
T ss_pred -----------------cEEEccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEe-CCCcHHHHHhCCEE
Confidence 3577899999999999999988 8999999999999999999999999 88888888899999
Q ss_pred c--cchhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHh
Q 003364 785 I--GKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFI 823 (826)
Q Consensus 785 ~--~~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~ 823 (826)
+ ++++.+.. .+.+||++++++++++.|++++|++.+.+
T Consensus 636 l~~~~~~~i~~-~i~~~r~~~~~i~~nl~~a~~~n~~~i~~ 675 (723)
T 3j09_A 636 LIRDDLRDVVA-AIQLSRKTMSKIKQNIFWALIYNVILIPA 675 (723)
T ss_dssp CSSCCTTHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9 45556665 45689999999999999999999976544
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4.3e-27 Score=243.00 Aligned_cols=139 Identities=22% Similarity=0.327 Sum_probs=120.2
Q ss_pred cCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHH
Q 003364 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERV 679 (826)
Q Consensus 600 ~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (826)
.+..+.|.+.+.++++|++.++|+.|+++|++++|+||++...+..+++++|+.
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~-------------------------- 176 (263)
T 2yj3_A 123 INGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ-------------------------- 176 (263)
Confidence 355789999999999999999999999999999999999999999999999972
Q ss_pred HHHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHh
Q 003364 680 LLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRM 759 (826)
Q Consensus 680 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~m 759 (826)
.+|..+.|..|..+++.++..+++++|||||.||++|
T Consensus 177 -------------------------------------------~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~a 213 (263)
T 2yj3_A 177 -------------------------------------------EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAA 213 (263)
Confidence 2344556889999999999888999999999999999
Q ss_pred HHhCCccEEecCCchHHHHhhccccc--cchhcchhheeecchhhHHHHHHH
Q 003364 760 IQKADIGVGISGREGLQAARAADYSI--GKFRFLKRLILVHGRYSYNRTAFL 809 (826)
Q Consensus 760 l~~A~vgIam~gn~~~~~~~~Ad~v~--~~~~~l~~l~l~~gr~~~~~~~~~ 809 (826)
++.||+||+| |++.+.....||+++ .++..+.. ++..+|.++++++++
T Consensus 214 a~~Agv~va~-g~~~~~~~~~ad~v~~~~~l~~l~~-~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 214 LALADVSVAM-GNGVDISKNVADIILVSNDIGTLLG-LIKNRKRLSNAIPSN 263 (263)
Confidence 9999999999 776665666899999 77777766 456799988887653
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.91 E-value=9.5e-25 Score=190.22 Aligned_cols=102 Identities=21% Similarity=0.293 Sum_probs=94.5
Q ss_pred hhhHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeeecccccc
Q 003364 93 LSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACM 172 (826)
Q Consensus 93 ~~~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~~~~~~~ 172 (826)
.+++++.+.+++|+|+|++++|++++|+|||+|.|++||+|||||+|+ +|.+.||||+|||||.|+.|
T Consensus 4 ~~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~-----~g~~~vdeS~LTGEs~pv~k------- 71 (113)
T 2hc8_A 4 KKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVV-----EGESYVDESMISGEPVPVLK------- 71 (113)
T ss_dssp HHHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEE-----ECCEEEECHHHHCCSSCEEE-------
T ss_pred HHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEE-----EceEEEEccccCCCCccEEE-------
Confidence 456788899999999999999999999999999999999999999999 77899999999999999999
Q ss_pred CCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcceeeccC
Q 003364 173 GMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTR 251 (826)
Q Consensus 173 ~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T~~~~~~ 251 (826)
..++.+|+||.+.+| .+.+.|++||.+|.++++.
T Consensus 72 --------------------------------------------~~g~~v~aGt~~~~G-~~~~~V~~~g~~T~~~~i~ 105 (113)
T 2hc8_A 72 --------------------------------------------SKGDEVFGATINNTG-VLKIRATRVGGETLLAQIV 105 (113)
T ss_dssp --------------------------------------------CTTCEECTTCEECSS-CEEEEEEECGGGSHHHHHH
T ss_pred --------------------------------------------CCCCEEEeCCEEeec-eEEEEEEEecCcCHHHHHH
Confidence 346789999999999 7999999999999998754
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-23 Score=219.19 Aligned_cols=271 Identities=21% Similarity=0.264 Sum_probs=194.9
Q ss_pred CCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhc
Q 003364 358 DTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVC 437 (826)
Q Consensus 358 ~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c 437 (826)
++++++|++.++|.++++++||||||||||.+.+.+..++..+. . ..+++. +|
T Consensus 15 ~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~----------~--------------~~~~l~---~~ 67 (287)
T 3a1c_A 15 ELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----------D--------------ERELLR---LA 67 (287)
T ss_dssp CCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS----------C--------------HHHHHH---HH
T ss_pred HCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC----------C--------------HHHHHH---HH
Confidence 34699999999999999999999999999999999988775421 0 012222 12
Q ss_pred eeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCC
Q 003364 438 NTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSG 517 (826)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~ 517 (826)
.++. ..+.||.+.|+.++++..|+..... ..+. ...| ..+..
T Consensus 68 ~~~e----------~~s~hp~~~a~~~~~~~~g~~~~~~--~~~~-~~~G-------------------~~~~~------ 109 (287)
T 3a1c_A 68 AIAE----------RRSEHPIAEAIVKKALEHGIELGEP--EKVE-VIAG-------------------EGVVA------ 109 (287)
T ss_dssp HHHT----------TTCCSHHHHHHHHHHHHTTCCCCCC--SCEE-EETT-------------------TEEEE------
T ss_pred HHHh----------hcCCCHHHHHHHHHHHhcCCCcccc--ccce-eecC-------------------CCeEE------
Confidence 2211 1257999999999999888642110 0000 0000 01100
Q ss_pred eEEEEecCchhhhhhhhhcCCChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q 003364 518 NISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQR 597 (826)
Q Consensus 518 ~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (826)
..+.+|.++.+..... ..++.+.+....+..+|.++++++
T Consensus 110 --~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~i~~~------------------------------------ 149 (287)
T 3a1c_A 110 --DGILVGNKRLMEDFGV--AVSNEVELALEKLEREAKTAVIVA------------------------------------ 149 (287)
T ss_dssp --TTEEEECHHHHHHTTC--CCCHHHHHHHHHHHHTTCEEEEEE------------------------------------
T ss_pred --EEEEECCHHHHHhcCC--CccHHHHHHHHHHHhCCCeEEEEE------------------------------------
Confidence 0133465544332211 112446667788888999999999
Q ss_pred hccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHH
Q 003364 598 LEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLE 677 (826)
Q Consensus 598 ~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (826)
.|..++|.+...+++.|++.++|+.|+++|++++++||++...+..+++.+|+.
T Consensus 150 --~d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~------------------------ 203 (287)
T 3a1c_A 150 --RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------ 203 (287)
T ss_dssp --ETTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------
T ss_pred --ECCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc------------------------
Confidence 467899999999999999999999999999999999999999999999999872
Q ss_pred HHHHHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccH
Q 003364 678 RVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDV 757 (826)
Q Consensus 678 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~ 757 (826)
.+|..+.|..|..+++.++.. +++++|||+.||+
T Consensus 204 ---------------------------------------------~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di 237 (287)
T 3a1c_A 204 ---------------------------------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDA 237 (287)
T ss_dssp ---------------------------------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCH
T ss_pred ---------------------------------------------eeeeecChHHHHHHHHHHhcC-CeEEEEECCHHHH
Confidence 234455688999999999988 9999999999999
Q ss_pred HhHHhCCccEEecCCchHHHHhhccccc--cchhcchhheeecchhhHHHHH
Q 003364 758 RMIQKADIGVGISGREGLQAARAADYSI--GKFRFLKRLILVHGRYSYNRTA 807 (826)
Q Consensus 758 ~ml~~A~vgIam~gn~~~~~~~~Ad~v~--~~~~~l~~l~l~~gr~~~~~~~ 807 (826)
+|.+.||++|++ +++.+..+..||+++ .++..+.. ++..+|.++++++
T Consensus 238 ~~a~~ag~~v~~-~~~~~~~~~~ad~v~~~~~~~~l~~-~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 238 PALAQADLGIAV-GSGSDVAVESGDIVLIRDDLRDVVA-AIQLSRKTMSKIK 287 (287)
T ss_dssp HHHHHSSEEEEE-CCCSCCSSCCSSEEESSSCTHHHHH-HHHTTC-------
T ss_pred HHHHHCCeeEEe-CCCCHHHHhhCCEEEeCCCHHHHHH-HHHHHHHHHHhhC
Confidence 999999999999 776555556899999 77777766 4567888877764
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=8.8e-22 Score=206.13 Aligned_cols=273 Identities=26% Similarity=0.297 Sum_probs=188.5
Q ss_pred ccccccccccccceEEEecCCcccccceeeEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeec
Q 003364 363 ATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIP 442 (826)
Q Consensus 363 ~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~ 442 (826)
+|++.++|.+++++.||||++||||.|++.|..+...+. ....++..++.+..
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~------------------------~~~~~~~~~~~~~~--- 53 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH------------------------SEDELLQIAASLEA--- 53 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS------------------------CHHHHHHHHHHHHT---
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC------------------------CHHHHHHHHHHhhc---
Confidence 478889999999999999999999999999999875321 11223333332221
Q ss_pred ccCCCCceeeecCCccHHHHHHHHHhCCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEE
Q 003364 443 AKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLL 522 (826)
Q Consensus 443 ~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~ 522 (826)
.+.++...++.+.+...|..... . +.+..++ ...+...+ ++.. +
T Consensus 54 ----------~s~~~~~~a~~~~~~~~g~~~~~-------------~---~~~~~~~----g~~~~~~~----~~~~--~ 97 (280)
T 3skx_A 54 ----------RSEHPIAAAIVEEAEKRGFGLTE-------------V---EEFRAIP----GKGVEGIV----NGRR--Y 97 (280)
T ss_dssp ----------TCCSHHHHHHHHHHHHTTCCCCC-------------C---EEEEEET----TTEEEEEE----TTEE--E
T ss_pred ----------cCCCHHHHHHHHHHHhcCCCCCC-------------c---cceeecC----CCEEEEEE----CCEE--E
Confidence 13578889999999888753211 0 0011111 11111111 1221 2
Q ss_pred ecCchhhhhhhhhcCCChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCc
Q 003364 523 SKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDL 602 (826)
Q Consensus 523 ~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l 602 (826)
..|.++.+....... . .....+...+.+++.++ .+.
T Consensus 98 ~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~--------------------------------------~~~ 133 (280)
T 3skx_A 98 MVVSPGYIRELGIKT--D----ESVEKLKQQGKTVVFIL--------------------------------------KNG 133 (280)
T ss_dssp EEECHHHHHHTTCCC--C----TTHHHHHTTTCEEEEEE--------------------------------------ETT
T ss_pred EEecHHHHHHcCCCc--h----HHHHHHHhCCCeEEEEE--------------------------------------ECC
Confidence 235665554443211 1 33456677888888877 477
Q ss_pred EEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHH
Q 003364 603 KVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLT 682 (826)
Q Consensus 603 ~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (826)
.++|.+.+.+++.|++.++++.|+++|+++.++||++...+..+++.+|+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl------------------------------ 183 (280)
T 3skx_A 134 EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL------------------------------ 183 (280)
T ss_dssp EEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTC------------------------------
T ss_pred EEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC------------------------------
Confidence 89999999999999999999999999999999999999999999999997
Q ss_pred cccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHh
Q 003364 683 MRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQK 762 (826)
Q Consensus 683 ~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~ 762 (826)
...|..+.|.+|...++.+.... .+++|||+.||++|++.
T Consensus 184 ---------------------------------------~~~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~ 223 (280)
T 3skx_A 184 ---------------------------------------DDYFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQ 223 (280)
T ss_dssp ---------------------------------------SEEECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHH
T ss_pred ---------------------------------------hhHhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHh
Confidence 23455667889999999888765 68999999999999999
Q ss_pred CCccEEecCCchHHHHhhccccc--cchhcchhheeecchhhHHHHHHHHHHHh
Q 003364 763 ADIGVGISGREGLQAARAADYSI--GKFRFLKRLILVHGRYSYNRTAFLSQYSF 814 (826)
Q Consensus 763 A~vgIam~gn~~~~~~~~Ad~v~--~~~~~l~~l~l~~gr~~~~~~~~~~~~~~ 814 (826)
||+||+| +|+.++++..||+++ .+.+.+..+ +..+|.+++++++++.|++
T Consensus 224 Ag~~va~-~~~~~~~~~~a~~~~~~~~~~~l~~~-l~~~~~~~~~~~~n~~~~~ 275 (280)
T 3skx_A 224 ADVGIAI-GAGTDVAVETADIVLVRNDPRDVAAI-VELSRKTYSKFHGLSAWSH 275 (280)
T ss_dssp SSEEEEC-SCCSSSCCCSSSEECSSCCTHHHHHH-HHHHHTCCC----------
T ss_pred CCceEEe-cCCcHHHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 9999999 888888888999998 666666663 4467887777777766654
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.9e-23 Score=183.56 Aligned_cols=103 Identities=17% Similarity=0.179 Sum_probs=93.3
Q ss_pred hhhHhhcceEEEEEeCCe------EEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeee
Q 003364 93 LSDKKANEKEVWVVKQGI------KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL 166 (826)
Q Consensus 93 ~~~~~~~~~~~~V~r~g~------~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~ 166 (826)
.++.++.+.+++|+|+|+ ++.|++++|+|||+|.|++|++|||||+|+ +|.+.||||+|||||.|+.|
T Consensus 10 ~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi-----~g~~~vdeS~LTGEs~pv~k- 83 (124)
T 2kij_A 10 AKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVI-----EGHSMVDESLITGEAMPVAK- 83 (124)
T ss_dssp HHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEEC-----SCCCEEECTTTTCCSSCEEC-
T ss_pred HHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEE-----EccEEEEeccccCCCccEEe-
Confidence 456778899999999764 789999999999999999999999999999 77789999999999999999
Q ss_pred ccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcce
Q 003364 167 IPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETK 246 (826)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T~ 246 (826)
..++.+|+||.+.+| .+.+.|++||.+|.
T Consensus 84 --------------------------------------------------~~g~~v~aGt~~~~G-~~~~~v~~~g~~T~ 112 (124)
T 2kij_A 84 --------------------------------------------------KPGSTVIAGSINQNG-SLLICATHVGADTT 112 (124)
T ss_dssp --------------------------------------------------CTTEEECTTCEEESS-CCEEEECSCTTTCH
T ss_pred --------------------------------------------------CCCCEEEcCCEEeee-EEEEEEEEecccCH
Confidence 346789999999999 79999999999999
Q ss_pred eeccCC
Q 003364 247 LGMTRG 252 (826)
Q Consensus 247 ~~~~~~ 252 (826)
++++.+
T Consensus 113 ~~~I~~ 118 (124)
T 2kij_A 113 LSQIVK 118 (124)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 987643
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.68 E-value=4.1e-18 Score=161.06 Aligned_cols=123 Identities=22% Similarity=0.297 Sum_probs=95.9
Q ss_pred cCCccHHHHHHHHHhCCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhh
Q 003364 454 AQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPY 533 (826)
Q Consensus 454 ~~~~~e~all~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~ 533 (826)
.+||+|.|+++++...+. ......|+++..+||+|.||||+|+++.. ++++++|+|||||.|+++
T Consensus 32 ~~n~~d~Ail~~~~~~~~--------------~~~~~~~~~~~eiPFds~rKrmsvv~~~~-~g~~~l~~KGApE~IL~~ 96 (170)
T 3gwi_A 32 LKNLLDTAVLEGTDEESA--------------RSLASRWQKIDEIPFDFERRRMSVVVAEN-TEHHQLVCKGALQEILNV 96 (170)
T ss_dssp CCCHHHHHHHHTSCHHHH--------------HHHHHHSEEEEEECCCTTTCEEEEEEESS-SSEEEEEEEECHHHHHTT
T ss_pred CCChHHHHHHHHHHhcCh--------------hhhhhcCeEEeeEecCcccCcEEEEEEeC-CCCEEEEEcCCcHHHHHH
Confidence 369999999998754221 01123478899999999999999999864 578899999999999999
Q ss_pred hhc-----------CCChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCc
Q 003364 534 AHA-----------GQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDL 602 (826)
Q Consensus 534 ~~~-----------~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l 602 (826)
|+. ...++.+.+.++.|+.+|+|||++|||.++..+.. . ....|+||
T Consensus 97 C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~------------~----------~~~~E~~L 154 (170)
T 3gwi_A 97 CSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD------------Y----------QRADESDL 154 (170)
T ss_dssp EEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC------------C----------CGGGSCSE
T ss_pred hHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccc------------c----------CccccCCc
Confidence 973 12246788999999999999999999998753210 0 02357999
Q ss_pred EEEEEEeeccc
Q 003364 603 KVLGVTAIEDR 613 (826)
Q Consensus 603 ~~lG~i~~~d~ 613 (826)
+|+|++||-|.
T Consensus 155 ~f~G~~g~~~~ 165 (170)
T 3gwi_A 155 ILEGYIAFLDH 165 (170)
T ss_dssp EEEEEEEEEC-
T ss_pred EEEehhccccc
Confidence 99999999874
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.4e-14 Score=151.05 Aligned_cols=189 Identities=19% Similarity=0.228 Sum_probs=118.1
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC---CC--CCCCc---------EEEecCCCHHHHHHHHH
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI---SP--EPKGQ---------LLSIDGKTEDEVCRSLE 677 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~---~~--~~~~~---------~~~~~~~~~~~~~~~~~ 677 (826)
..+.+.++++|++++++|++++++|||+...+..+.+.+|+. .+ ..+|. .+.......+.....++
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~l~~~~~~~i~~ 100 (279)
T 4dw8_A 21 KEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYE 100 (279)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTCCEEEECCCCGGGHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHH
Confidence 468899999999999999999999999999999999999973 21 11222 22222222222332222
Q ss_pred HHHHH-cc--c------------------------------------ccCCCCceEEEEcC-hhHHHHHHHHHHHHh-hh
Q 003364 678 RVLLT-MR--I------------------------------------TTSEPKDVAFVVDG-WALEIALKHYRKAFT-EL 716 (826)
Q Consensus 678 ~~~~~-~~--~------------------------------------~~~~~~~~~l~~~g-~~~~~~~~~~~~~~~-~~ 716 (826)
..... +. . ......+. ++... ...+.+.+.+.+.+. .+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki-~~~~~~~~~~~~~~~l~~~~~~~~ 179 (279)
T 4dw8_A 101 CARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKC-LIVGDAGKLIPVESELCIRLQGKI 179 (279)
T ss_dssp HHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCE-EEESCHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEE-EEeCCHHHHHHHHHHHHHHhcCCE
Confidence 22111 00 0 00011111 12222 223334444444442 23
Q ss_pred ccccceeEEEEeCcc--cHHHHHHHhh----cCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccch--
Q 003364 717 AILSRTAICCRVTPS--QKAQLVELLK----SCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF-- 788 (826)
Q Consensus 717 ~~~~~~~i~~~~~p~--~K~~iv~~l~----~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~-- 788 (826)
........+.++.|. +|+..++.+. ...+++++|||+.||++|++.||+|||| ||+.+++|+.||+|+.++
T Consensus 180 ~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~A~~v~~~~~e 258 (279)
T 4dw8_A 180 NVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAM-GNAQEPVKKAADYITLTNDE 258 (279)
T ss_dssp EEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCSEECCCGGG
T ss_pred EEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEc-CCCcHHHHHhCCEEcCCCCC
Confidence 333344556788887 6887666554 4567899999999999999999999999 999999999999999776
Q ss_pred ----hcchhheeecchhh
Q 003364 789 ----RFLKRLILVHGRYS 802 (826)
Q Consensus 789 ----~~l~~l~l~~gr~~ 802 (826)
+.|+++++.+|...
T Consensus 259 ~Gv~~~i~~~~~~~~~~~ 276 (279)
T 4dw8_A 259 DGVAEAIERIFNVEGHHH 276 (279)
T ss_dssp THHHHHHHHHC-------
T ss_pred cHHHHHHHHHHhcccccc
Confidence 56778777777654
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.55 E-value=2.3e-14 Score=150.36 Aligned_cols=192 Identities=18% Similarity=0.236 Sum_probs=119.2
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEE--------ecCCCHHHHHHHHHHHH
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLS--------IDGKTEDEVCRSLERVL 680 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~--------~~~~~~~~~~~~~~~~~ 680 (826)
...+.+.+.++|++++++|++++++|||+...+..+.+.+|+..+ ..+|..+. ......+.....++...
T Consensus 21 ~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~l~~~~~~~i~~~~~ 100 (290)
T 3dnp_A 21 NGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDAPFFEKRISDDHTFNIVQVLE 100 (290)
T ss_dssp TSCCCHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTTSCSEECCCCHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCCCEEEecCCCHHHHHHHHHHHH
Confidence 346889999999999999999999999999999999999987532 11222222 12222222222222221
Q ss_pred HH-ccc--c--------c-------------------------------------CCCCceEEEEcChhHHHHHHHHHHH
Q 003364 681 LT-MRI--T--------T-------------------------------------SEPKDVAFVVDGWALEIALKHYRKA 712 (826)
Q Consensus 681 ~~-~~~--~--------~-------------------------------------~~~~~~~l~~~g~~~~~~~~~~~~~ 712 (826)
+. ... . . ....+..+..+......+.+.+...
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~ 180 (290)
T 3dnp_A 101 SYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVIEVYTEHDIQHDITETITKA 180 (290)
T ss_dssp TSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHSCCCCSEEEEECCGGGHHHHHHHHHHH
T ss_pred HcCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhh
Confidence 10 000 0 0 0000111111222233333333333
Q ss_pred HhhhccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhcccccc
Q 003364 713 FTELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIG 786 (826)
Q Consensus 713 ~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~ 786 (826)
++.+........+.++.|. +|+..++.+.+ ..+++++|||+.||++|++.||+|||| +|+.+++++.||+|+.
T Consensus 181 ~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~Ad~v~~ 259 (290)
T 3dnp_A 181 FPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAM-GNAVPEIKRKADWVTR 259 (290)
T ss_dssp CTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHSSEECC
T ss_pred CCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEe-cCCcHHHHHhcCEECC
Confidence 3444444445556788875 68876666543 567899999999999999999999999 9999999999999997
Q ss_pred ch------hcchhheeecchhhH
Q 003364 787 KF------RFLKRLILVHGRYSY 803 (826)
Q Consensus 787 ~~------~~l~~l~l~~gr~~~ 803 (826)
++ +.|++++...++.-|
T Consensus 260 s~~edGv~~~i~~~~~~~~~~~~ 282 (290)
T 3dnp_A 260 SNDEQGVAYMMKEYFRMQQRKGF 282 (290)
T ss_dssp CTTTTHHHHHHHHHHHHHHHC--
T ss_pred CCCccHHHHHHHHHHHhcCcccH
Confidence 76 345555444444433
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.54 E-value=2e-14 Score=149.95 Aligned_cols=190 Identities=15% Similarity=0.183 Sum_probs=106.6
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCC-----CCCc--------EEEecCCCHHHHHHHHHH
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE-----PKGQ--------LLSIDGKTEDEVCRSLER 678 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~-----~~~~--------~~~~~~~~~~~~~~~~~~ 678 (826)
..+.+.++++|++++++|++++++|||+...+..+.+.+|+..+. .+|. .+.......+.....++.
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~~~~~~~~~~~~~~~i~~~ 100 (279)
T 3mpo_A 21 NELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYEDYIDLEAW 100 (279)
T ss_dssp ---CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSCEEEECCCCHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCCEEEecCCCHHHHHHHHHH
Confidence 368899999999999999999999999999999999999975421 1222 222222222333322222
Q ss_pred HHHH-ccc-------------------------------------ccCCCCceEEEEcC--hhHHHHHHHHHHHHhh-hc
Q 003364 679 VLLT-MRI-------------------------------------TTSEPKDVAFVVDG--WALEIALKHYRKAFTE-LA 717 (826)
Q Consensus 679 ~~~~-~~~-------------------------------------~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~~-~~ 717 (826)
.... ... .........+.... .......+.+.+.+.. +.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (279)
T 3mpo_A 101 ARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFKDRFS 180 (279)
T ss_dssp HHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHHHHHCCHHHHHHEE
T ss_pred HHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHHHHHHHHHhCCCEE
Confidence 2111 000 00011111122222 1222233333233322 34
Q ss_pred cccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccch---
Q 003364 718 ILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF--- 788 (826)
Q Consensus 718 ~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~--- 788 (826)
.......+.++.|. +|+..++.+.+ ..+++++|||+.||++|++.||+|||| +|+.+++|+.||+|+.++
T Consensus 181 ~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~A~~v~~~~~e~ 259 (279)
T 3mpo_A 181 VVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAM-GNAIDEVKEAAQAVTLTNAEN 259 (279)
T ss_dssp EECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC------
T ss_pred EEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeec-cCCCHHHHHhcceeccCCCcc
Confidence 44445567788886 59876666554 467899999999999999999999999 999999999999999766
Q ss_pred ---hcchhheeecchhh
Q 003364 789 ---RFLKRLILVHGRYS 802 (826)
Q Consensus 789 ---~~l~~l~l~~gr~~ 802 (826)
+.|+++++-+|...
T Consensus 260 Gv~~~i~~~~~~~~~~~ 276 (279)
T 3mpo_A 260 GVAAAIRKYALNEGHHH 276 (279)
T ss_dssp CHHHHHC----------
T ss_pred HHHHHHHHHhcccCccc
Confidence 56777777777643
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.53 E-value=2.8e-14 Score=149.28 Aligned_cols=177 Identities=19% Similarity=0.144 Sum_probs=112.9
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCc--------EEEecCCCHHHHHHHHHHHH
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQ--------LLSIDGKTEDEVCRSLERVL 680 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~--------~~~~~~~~~~~~~~~~~~~~ 680 (826)
...+.+.++++|++++++|++++++|||+...+..+.+.+|+..+ ..+|. .+.......+.....++...
T Consensus 36 ~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~~l~~~~l~~~~~~~i~~~~~ 115 (285)
T 3pgv_A 36 DHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVR 115 (285)
T ss_dssp TSCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSCEEEECCCCHHHHHHHTTTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCCEEEecCCCHHHHHHHHHHHh
Confidence 346889999999999999999999999999999999999998532 11222 22222222222222221010
Q ss_pred HH--ccc--c------------------------------c--CCCCceEEEEc-C--hhHHHHHHHHHHHHhh-hcccc
Q 003364 681 LT--MRI--T------------------------------T--SEPKDVAFVVD-G--WALEIALKHYRKAFTE-LAILS 720 (826)
Q Consensus 681 ~~--~~~--~------------------------------~--~~~~~~~l~~~-g--~~~~~~~~~~~~~~~~-~~~~~ 720 (826)
.. ... . . .......+++. . .....+.+.+.+.+.. +....
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 195 (285)
T 3pgv_A 116 NDPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSF 195 (285)
T ss_dssp TCTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEE
T ss_pred hcCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 00 000 0 0 00001112222 2 2233444445555532 33334
Q ss_pred ceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccc--cccch
Q 003364 721 RTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY--SIGKF 788 (826)
Q Consensus 721 ~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~--v~~~~ 788 (826)
....+.++.|. +|+..++.+.+ ..+++++|||+.||++|++.||+|||| +|+.+++|+.||+ ++.++
T Consensus 196 s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm-~Na~~~vk~~A~~~~v~~sn 270 (285)
T 3pgv_A 196 STLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIM-ANAHQRLKDLHPELEVIGSN 270 (285)
T ss_dssp SSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCTTSEECCCG
T ss_pred eCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEc-cCCCHHHHHhCCCCEecccC
Confidence 44556788886 59877776654 467899999999999999999999999 9999999999985 66655
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.53 E-value=5.1e-14 Score=147.02 Aligned_cols=176 Identities=14% Similarity=0.118 Sum_probs=114.9
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEE-------ecCCCHHHHHHHHHHHHHH-
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLS-------IDGKTEDEVCRSLERVLLT- 682 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~-------~~~~~~~~~~~~~~~~~~~- 682 (826)
.+.+.++++|++++++|++++++|||+...+..+.+.++...+ ..+|..+. ......+.....++.....
T Consensus 39 ~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 118 (283)
T 3dao_A 39 LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVVRTPKEILKTYPMDEDIWKGMCRMVRDEL 118 (283)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEEECSSCEEEECCCCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEEEECCEEEEEecCCHHHHHHHHHHHHHhc
Confidence 5889999999999999999999999999999999888875422 11222222 2222233332222222211
Q ss_pred -------------------------ccc--------------cc-CCCCceEEEEcChhHHHHHHHHHHHHh-hhccccc
Q 003364 683 -------------------------MRI--------------TT-SEPKDVAFVVDGWALEIALKHYRKAFT-ELAILSR 721 (826)
Q Consensus 683 -------------------------~~~--------------~~-~~~~~~~l~~~g~~~~~~~~~~~~~~~-~~~~~~~ 721 (826)
+.. .. ....+..+..+....+...+.+.+.+. .+.....
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ki~i~~~~~~~~~~~~~l~~~~~~~~~~~~s 198 (283)
T 3dao_A 119 PACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDIIKFTVFHPDKCEELCTPVFIPAWNKKAHLAAA 198 (283)
T ss_dssp TTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCCEEEEECSSCHHHHHTTTHHHHHTTTEEEEEE
T ss_pred CCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCceEEEEEcChHHHHHHHHHHHHHhcCCEEEEEe
Confidence 000 00 111122222134444444444555553 2333334
Q ss_pred eeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccchh
Q 003364 722 TAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (826)
Q Consensus 722 ~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~~ 789 (826)
...+.++.|. +|+..++.+.+ ..++|++|||+.||++|++.||+|||| +|+.+++|+.||+|+.+++
T Consensus 199 ~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam-~na~~~~k~~A~~v~~s~~ 271 (283)
T 3dao_A 199 GKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAV-SNARQEVIAAAKHTCAPYW 271 (283)
T ss_dssp TTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEE-TTSCHHHHHHSSEEECCGG
T ss_pred cCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEc-CCCCHHHHHhcCeECCCCC
Confidence 4556788876 59876666554 467899999999999999999999999 9999999999999997764
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.48 E-value=2.8e-14 Score=146.98 Aligned_cols=174 Identities=18% Similarity=0.220 Sum_probs=107.7
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC-CCCCcEEEe-------cCCCHHHHHHHHHHHHHH-
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP-EPKGQLLSI-------DGKTEDEVCRSLERVLLT- 682 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~-~~~~~~~~~-------~~~~~~~~~~~~~~~~~~- 682 (826)
..+++.++++|++++++|++++++|||+...+..+.+++++... ..+|..+.. .....+.....++.....
T Consensus 19 ~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~i~~~~~~~~~~~~i~~~~~~~~ 98 (258)
T 2pq0_A 19 KQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVLYKQPLRREKVRALTEEAHKNG 98 (258)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHHTT
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEEEEEecCCHHHHHHHHHHHHhCC
Confidence 45888999999999999999999999999999999998876321 112222222 222223332222222110
Q ss_pred cc--cccCC---------------------------------CCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEE
Q 003364 683 MR--ITTSE---------------------------------PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCR 727 (826)
Q Consensus 683 ~~--~~~~~---------------------------------~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 727 (826)
.. ..... ...+.+++.+... ......+.++.+....+...+.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~e 176 (258)
T 2pq0_A 99 HPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCRAE--EEEPYVRNYPEFRFVRWHDVSTD 176 (258)
T ss_dssp CCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSCHH--HHHHHHHHCTTEEEEEEETTEEE
T ss_pred CeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECCHH--HHHHHHHhCCCeEEEEeCCceEE
Confidence 00 00000 0011122222211 11112222333322223344567
Q ss_pred eCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 728 VTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 728 ~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
+.|. +|+..++.+.+ ..+++++||||.||++|++.||+|||| +|+.+++|+.||+|+.++
T Consensus 177 i~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam-~na~~~~k~~A~~v~~~~ 242 (258)
T 2pq0_A 177 VLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM-GNAHEEVKRVADFVTKPV 242 (258)
T ss_dssp EEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE-TTCCHHHHHTCSEEECCG
T ss_pred EEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe-CCCcHHHHHhCCEEeCCC
Confidence 7776 69876666544 567899999999999999999999999 899999999999999766
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.3e-13 Score=145.57 Aligned_cols=176 Identities=13% Similarity=0.130 Sum_probs=111.6
Q ss_pred ccCCc-hHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEE-------EecCCCHHHHHHHHHHHHHH
Q 003364 613 RLQDG-VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLL-------SIDGKTEDEVCRSLERVLLT 682 (826)
Q Consensus 613 ~l~~~-~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 682 (826)
.+.+. +.++|++++++|+.++++|||+...+..+...+++..+ ..+|..+ .......+.....++...+.
T Consensus 54 ~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~ 133 (304)
T 3l7y_A 54 SYDHNRFQRILKQLQERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKNQSLIEVFQQREDIASIIYFIEEK 133 (304)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHTTCTTTGGGSEEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCCcEEeCCCcEEEECCEEEEEecCCHHHHHHHHHHHHHh
Confidence 46777 88999999999999999999999999888777765321 1122222 22222333333333322221
Q ss_pred c---cc----------------------------------ccC--CCCceEEEE--cChhHHHHHHHHHHHHhh--hccc
Q 003364 683 M---RI----------------------------------TTS--EPKDVAFVV--DGWALEIALKHYRKAFTE--LAIL 719 (826)
Q Consensus 683 ~---~~----------------------------------~~~--~~~~~~l~~--~g~~~~~~~~~~~~~~~~--~~~~ 719 (826)
. .. ... ......+.+ .....+.+.+.+.+.+.. +...
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 213 (304)
T 3l7y_A 134 YPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPDERFFKLTLQVKEEESAQIMKAIADYKTSQRLVGT 213 (304)
T ss_dssp CTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESCCSSCC-CCEEEEEEECCGGGHHHHHHHHHTSTTTTTEEEE
T ss_pred cCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCCHHHcCcCCeEEEEEEcCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 0 00 000 011112222 222334444444444443 4444
Q ss_pred cceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccchh
Q 003364 720 SRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (826)
Q Consensus 720 ~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~~ 789 (826)
.....+.++.|. +|+..++.+.+ ..+++++|||+.||++|++.||+|||| +|+.+++|+.||+|+.+++
T Consensus 214 ~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam-~na~~~~k~~Ad~v~~~~~ 288 (304)
T 3l7y_A 214 ASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAM-ANAPKNVKAAANYQAKSND 288 (304)
T ss_dssp ECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEEC-TTSCHHHHHHCSEECCCGG
T ss_pred EcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEc-CCcCHHHHHhccEEcCCCC
Confidence 444556777776 69876666643 467899999999999999999999999 9999999999999997763
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.43 E-value=3.2e-13 Score=135.63 Aligned_cols=172 Identities=16% Similarity=0.160 Sum_probs=108.7
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEe-cCCCH-H----HHHHHHHHHHHH
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSI-DGKTE-D----EVCRSLERVLLT 682 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~-~~~~~-~----~~~~~~~~~~~~ 682 (826)
...+++.++++|++|+++|++++++|||+...+..+++++|+..+ ..+|..+.. ++... . +....+ +....
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i-~~~~~ 98 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFL-EEMSK 98 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHH-HHHTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHH-HHHHH
Confidence 456889999999999999999999999999999999999998543 122333322 22221 0 111112 11111
Q ss_pred cccccCC-------CCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEE
Q 003364 683 MRITTSE-------PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLA 749 (826)
Q Consensus 683 ~~~~~~~-------~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~ 749 (826)
.. .... ......++.... ....+.+.+.+ .+... ....+.++.|. +|+..++.+.+ ..+.+++
T Consensus 99 ~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~-~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~ 174 (227)
T 1l6r_A 99 RT-SMRSILTNRWREASTGFDIDPED-VDYVRKEAESR-GFVIF-YSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILV 174 (227)
T ss_dssp TS-SCBCCGGGGGCSSSEEEBCCGGG-HHHHHHHHHTT-TEEEE-EETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEE
T ss_pred Hh-cCCccccccceecccceEEecCC-HHHHHHHHHhc-CEEEE-ecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEE
Confidence 00 0000 000000000001 11122222223 33333 44556788885 79987777664 3568999
Q ss_pred EcCCcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 750 IGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 750 iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
|||+.||++|++.||+||+| +|+.+++++.||+++.++
T Consensus 175 iGD~~nD~~m~~~ag~~va~-~n~~~~~k~~a~~v~~~~ 212 (227)
T 1l6r_A 175 IGDSNNDMPMFQLPVRKACP-ANATDNIKAVSDFVSDYS 212 (227)
T ss_dssp ECCSGGGHHHHTSSSEEEEC-TTSCHHHHHHCSEECSCC
T ss_pred ECCcHHhHHHHHHcCceEEe-cCchHHHHHhCCEEecCC
Confidence 99999999999999999999 899999999999999765
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.43 E-value=7.9e-13 Score=137.34 Aligned_cols=173 Identities=13% Similarity=0.149 Sum_probs=107.1
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC-CCCCcEEEe-------cCCCHHHHHHHHHHHHHH-c
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP-EPKGQLLSI-------DGKTEDEVCRSLERVLLT-M 683 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~-~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-~ 683 (826)
.+.+.+.++|++++++|++++++|||+...+..+.+.+|+... ..+|..+.. .....+.....++...+. .
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 101 (274)
T 3fzq_A 22 GIPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYHGELLYNQSFNQRLIKEVVCLLKKREV 101 (274)
T ss_dssp BCCHHHHHHHHHHHHTTCEEEEECSSCTTTSCHHHHTTCCSEEEETTTTEEEETTEEEEECCCCHHHHHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEEEecCccEEEECCEEEEEcCCCHHHHHHHHHHHHHCCc
Confidence 5889999999999999999999999999999999988886421 112223322 222222222222221110 0
Q ss_pred cc---------------------------------------------ccC--CCCceEEEEcChhHHHHHHHHHHHHhh-
Q 003364 684 RI---------------------------------------------TTS--EPKDVAFVVDGWALEIALKHYRKAFTE- 715 (826)
Q Consensus 684 ~~---------------------------------------------~~~--~~~~~~l~~~g~~~~~~~~~~~~~~~~- 715 (826)
.. ... ......+.+... ....+.+.+.+..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~--~~~~~~~~~~l~~~ 179 (274)
T 3fzq_A 102 AFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEKITYENNIEEYKSQDIHKICLWSN--EKVFDEVKDILQDK 179 (274)
T ss_dssp EEEEECSSCEEECHHHHHHHHHHHHTTTSCCTTHHHHCCSSSCCCCCGGGCSSCCCCEEEEECC--HHHHHHHHHHHGGG
T ss_pred eEEEEeCCceEeCCchHHHHHHHHhhhccchhhhhhhhhhhcccccchhhhcccCeEEEEEEcC--HHHHHHHHHHhhcc
Confidence 00 000 001112222211 1222333334432
Q ss_pred hcccccee--EEEEeCcc--cHHHHHHHh----hcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccc
Q 003364 716 LAILSRTA--ICCRVTPS--QKAQLVELL----KSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (826)
Q Consensus 716 ~~~~~~~~--i~~~~~p~--~K~~iv~~l----~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~ 787 (826)
+....... .+.++.|. +|+..++.+ +...+++++|||+.||++|++.||+|||| +|+.+++++.||+|+.+
T Consensus 180 ~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~A~~v~~~ 258 (274)
T 3fzq_A 180 MELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAM-KNSHQQLKDIATSICED 258 (274)
T ss_dssp EEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEE-TTSCHHHHHHCSEEECC
T ss_pred eEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEe-cCccHHHHHhhhheeCC
Confidence 22222222 45567775 587655544 44678999999999999999999999999 99999999999999977
Q ss_pred h
Q 003364 788 F 788 (826)
Q Consensus 788 ~ 788 (826)
+
T Consensus 259 ~ 259 (274)
T 3fzq_A 259 I 259 (274)
T ss_dssp G
T ss_pred C
Confidence 6
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.40 E-value=3.8e-13 Score=139.30 Aligned_cols=65 Identities=29% Similarity=0.468 Sum_probs=55.3
Q ss_pred eEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 723 AICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 723 ~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
..+.++.|. +|+..++.+.+ ..+++++|||+.||++|++.||+|||| +|+.+++|+.||+|+.++
T Consensus 183 ~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam-~na~~~~k~~Ad~v~~~~ 253 (268)
T 3r4c_A 183 PLFADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAM-GNASEKVQSVADFVTDTV 253 (268)
T ss_dssp TTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHTCSEECCCT
T ss_pred CCeEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEe-CCCcHHHHHhcCEeeCCC
Confidence 345677776 68876665544 467899999999999999999999999 999999999999999776
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.37 E-value=4.1e-12 Score=132.40 Aligned_cols=176 Identities=18% Similarity=0.202 Sum_probs=110.3
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC-----CCCCcEEEe--cCCC-------HHHHHHHHH
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP-----EPKGQLLSI--DGKT-------EDEVCRSLE 677 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~-----~~~~~~~~~--~~~~-------~~~~~~~~~ 677 (826)
..+.+.++++|++++++|++++++|||+...+..+++++++..+ ..+|..+.. +++. .+.....++
T Consensus 21 ~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~~~~~~i~~~~l~~~~~~~i~~ 100 (282)
T 1rkq_A 21 HTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEK 100 (282)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHH
Confidence 46889999999999999999999999999999999999997542 223333332 2222 222222222
Q ss_pred HHHHH-cc--cccC-----------------------------------CCCceEEEEcCh--hHHHHHHHHHHHHh-hh
Q 003364 678 RVLLT-MR--ITTS-----------------------------------EPKDVAFVVDGW--ALEIALKHYRKAFT-EL 716 (826)
Q Consensus 678 ~~~~~-~~--~~~~-----------------------------------~~~~~~l~~~g~--~~~~~~~~~~~~~~-~~ 716 (826)
..... .. .... ......+.+.+. ..+.+.+.+.+.+. .+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~ 180 (282)
T 1rkq_A 101 LSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKY 180 (282)
T ss_dssp HHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHE
T ss_pred HHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCceEEEEECCHHHHHHHHHHHHHHhcCCE
Confidence 21110 00 0000 000011111111 12222222222232 23
Q ss_pred ccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 717 AILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 717 ~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
....+...+.++.|. +|+..++.+.+ ..+++++|||+.||++|++.||+|||| +|+.+++++.||+++.++
T Consensus 181 ~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~n~~~~~~~~a~~v~~~~ 257 (282)
T 1rkq_A 181 TVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV-DNAIPSVKEVANFVTKSN 257 (282)
T ss_dssp EEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCSEECCCT
T ss_pred EEEEeCCceEEecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEe-cCCcHHHHhhCCEEecCC
Confidence 333333446788887 69887777654 457899999999999999999999999 899889999999999765
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.34 E-value=1.2e-12 Score=127.28 Aligned_cols=137 Identities=13% Similarity=0.085 Sum_probs=105.0
Q ss_pred cEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHH
Q 003364 602 LKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLL 681 (826)
Q Consensus 602 l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (826)
...++.+.+.+.. +|+.|+++|++++++||++...+..+++.+|+..
T Consensus 41 ~~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~--------------------------- 87 (189)
T 3mn1_A 41 GSEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH--------------------------- 87 (189)
T ss_dssp SCEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE---------------------------
T ss_pred CcEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH---------------------------
Confidence 3445555555443 9999999999999999999999999999999821
Q ss_pred HcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhh----cCCCeEEEEcCCcccH
Q 003364 682 TMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLK----SCDYRTLAIGDGGNDV 757 (826)
Q Consensus 682 ~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~----~~~~~v~~iGDg~ND~ 757 (826)
+|.. ...|...++.+. ..+++++++||+.||+
T Consensus 88 ------------------------------------------~f~~--~~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi 123 (189)
T 3mn1_A 88 ------------------------------------------LFQG--REDKLVVLDKLLAELQLGYEQVAYLGDDLPDL 123 (189)
T ss_dssp ------------------------------------------EECS--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred ------------------------------------------HhcC--cCChHHHHHHHHHHcCCChhHEEEECCCHHHH
Confidence 1111 145665554443 3468899999999999
Q ss_pred HhHHhCCccEEecCCchHHHHhhccccccc------hhcchhheeecchhhHHHHHHHHHHHhhhh
Q 003364 758 RMIQKADIGVGISGREGLQAARAADYSIGK------FRFLKRLILVHGRYSYNRTAFLSQYSFYKS 817 (826)
Q Consensus 758 ~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~------~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~ 817 (826)
+|++.||++++| +++.+.+++.||+++.+ ...+.++ +...|..+.++++.+.|.+.+|
T Consensus 124 ~~~~~ag~~~~~-~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~-l~~~~~~~~~~~~~~~~~~~~~ 187 (189)
T 3mn1_A 124 PVIRRVGLGMAV-ANAASFVREHAHGITRAQGGEGAAREFCEL-ILSAQGNLEAAHSVYLEGHHHH 187 (189)
T ss_dssp HHHHHSSEEEEC-TTSCHHHHHTSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHHTTSTTC---
T ss_pred HHHHHCCCeEEe-CCccHHHHHhCCEEecCCCCCcHHHHHHHH-HHHccCcHHHHHHHHhcccccc
Confidence 999999999999 88888889999999976 3455553 4467888999999999887765
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.34 E-value=6.6e-13 Score=139.49 Aligned_cols=137 Identities=15% Similarity=0.115 Sum_probs=94.8
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCC
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (826)
..+++|+++++++.|+++|+++.|+||+...++.++++++|+...+.. + ..+.....+
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~--i-~~n~l~~~~------------------- 196 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVK--V-VSNFMDFDE------------------- 196 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEE--E-EEECEEECT-------------------
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccce--E-EeeeEEEcc-------------------
Confidence 468999999999999999999999999999999999999998654321 1 111000000
Q ss_pred CceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHH---hCCccE
Q 003364 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQ---KADIGV 767 (826)
Q Consensus 691 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~---~A~vgI 767 (826)
........+ .....+++..|.+|...+..++..++.|+|+|||.||+||++ .||+||
T Consensus 197 ~~~~~~~~~--------------------~~i~~~~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgi 256 (297)
T 4fe3_A 197 NGVLKGFKG--------------------ELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHIL 256 (297)
T ss_dssp TSBEEEECS--------------------SCCCTTCHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEE
T ss_pred cceeEeccc--------------------cccchhhcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEE
Confidence 000000000 001122334555677778888888899999999999999955 899999
Q ss_pred EecC-------CchHHHHhhccccccchhc
Q 003364 768 GISG-------REGLQAARAADYSIGKFRF 790 (826)
Q Consensus 768 am~g-------n~~~~~~~~Ad~v~~~~~~ 790 (826)
|| | ++.+..+++||+|+.+.+.
T Consensus 257 ai-Gfl~~~v~~~~d~~~e~~Divl~~d~~ 285 (297)
T 4fe3_A 257 KI-GYLNDRVDELLEKYMDSYDIVLVKEES 285 (297)
T ss_dssp EE-EEECSSHHHHHHHHHHHSSEEEETCCB
T ss_pred EE-EecchhHHHhHHHHHhhCCEEEECCCC
Confidence 99 6 4444556799999965433
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=99.33 E-value=3.2e-12 Score=129.53 Aligned_cols=165 Identities=12% Similarity=0.109 Sum_probs=101.3
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCC------HHHHHHHHHHHHHHcccc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKT------EDEVCRSLERVLLTMRIT 686 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 686 (826)
.+++.++++|++|+++| +++++|||++..+..++..+ ..--..+|..+..+++. ........+.........
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l-~~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 100 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD-INMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWV 100 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS-CEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc-hheEEECCEEEeeCCeeeecccccccchhhHHHHHHHHHHH
Confidence 57899999999999999 99999999999998887665 21112344444445544 222211111111111110
Q ss_pred cCCC------CceEEEEcC--------hhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhcCCCeEEEE
Q 003364 687 TSEP------KDVAFVVDG--------WALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAI 750 (826)
Q Consensus 687 ~~~~------~~~~l~~~g--------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~~~~v~~i 750 (826)
.... ....+.... ...+.+.+.+.+. ..+. +.....+.++.|. +|+..++.+.+... |++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~-~~~~~~~lei~~~~~~Kg~al~~l~~~~g-via~ 177 (239)
T 1u02_A 101 SDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARI-FGVE-TYYGKMIIELRVPGVNKGSAIRSVRGERP-AIIA 177 (239)
T ss_dssp HHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHH-HTCE-EEECSSEEEEECTTCCHHHHHHHHHTTSC-EEEE
T ss_pred hhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhcc-CCcE-EEeCCcEEEEEcCCCCHHHHHHHHHhhCC-eEEE
Confidence 0000 001111100 0111122222221 2232 2334456788887 69999999987644 9999
Q ss_pred cCCcccHHhHHhC--CccEEecCCchHHHHhhccccccc
Q 003364 751 GDGGNDVRMIQKA--DIGVGISGREGLQAARAADYSIGK 787 (826)
Q Consensus 751 GDg~ND~~ml~~A--~vgIam~gn~~~~~~~~Ad~v~~~ 787 (826)
||+.||++||+.| |+|||| +|+ ++.|++++.+
T Consensus 178 GD~~ND~~Ml~~a~~g~~vam-~Na----~~~A~~v~~~ 211 (239)
T 1u02_A 178 GDDATDEAAFEANDDALTIKV-GEG----ETHAKFHVAD 211 (239)
T ss_dssp ESSHHHHHHHHTTTTSEEEEE-SSS----CCCCSEEESS
T ss_pred eCCCccHHHHHHhhCCcEEEE-CCC----CCcceEEeCC
Confidence 9999999999999 999999 887 5689999877
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.32 E-value=5.6e-12 Score=130.56 Aligned_cols=177 Identities=16% Similarity=0.189 Sum_probs=107.5
Q ss_pred cccCCch-HHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEe-------cCCCHHHHHHHHHHHHH
Q 003364 612 DRLQDGV-PETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSI-------DGKTEDEVCRSLERVLL 681 (826)
Q Consensus 612 d~l~~~~-~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 681 (826)
..+.+.+ +++|++|+++|++++++|||++..+..+..++++..+ ..+|..+.. .....+.....++...+
T Consensus 19 ~~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~ 98 (271)
T 1rlm_A 19 KTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLK 98 (271)
T ss_dssp SCCCHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHT
T ss_pred CcCCHHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHhcCCCCEEEECCccEEEECCeEEEEecCCHHHHHHHHHHHHh
Confidence 3577775 9999999999999999999999998887777664221 122333322 22222333222222211
Q ss_pred Hccc-------------------------------c-----cC-CCCceEEEE-c-ChhHHHHHHHHHHHHhh-hccccc
Q 003364 682 TMRI-------------------------------T-----TS-EPKDVAFVV-D-GWALEIALKHYRKAFTE-LAILSR 721 (826)
Q Consensus 682 ~~~~-------------------------------~-----~~-~~~~~~l~~-~-g~~~~~~~~~~~~~~~~-~~~~~~ 721 (826)
.... . .. ......+.+ . ....+.+.+.+.+.+.. +.....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~i~~~~~~~~~~~~~l~~~~~~~~~~~~s 178 (271)
T 1rlm_A 99 DKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTS 178 (271)
T ss_dssp CTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEECCGGGHHHHHHHHHHHTTTSSEEEEC
T ss_pred CCCccEEEEeCCCEEeeCCCCHHHHHHHHHhCCCCEEeCchhhCCCceEEEEEEcCHHHHHHHHHHHHHHcCCcEEEEec
Confidence 0000 0 00 001111212 2 22233344444433432 332333
Q ss_pred eeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccchh
Q 003364 722 TAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (826)
Q Consensus 722 ~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~~ 789 (826)
...+.++.|. +|+..++.+.+ ..+++++|||+.||++|++.||+||+| +|+.+++++.||+++.+++
T Consensus 179 ~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~-~na~~~~k~~a~~v~~~~~ 251 (271)
T 1rlm_A 179 GFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAM-GNAAENIKQIARYATDDNN 251 (271)
T ss_dssp STTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEC-TTCCHHHHHHCSEECCCGG
T ss_pred cCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEe-CCccHHHHHhCCeeCcCCC
Confidence 3345577665 68876666544 467899999999999999999999999 9999999999999997653
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.31 E-value=1.2e-11 Score=129.81 Aligned_cols=177 Identities=14% Similarity=0.165 Sum_probs=111.4
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHH--HHcC-CCC---C--CCCCcEEEe-cCC-------CHHHHHH
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA--LSCN-FIS---P--EPKGQLLSI-DGK-------TEDEVCR 674 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a--~~~g-i~~---~--~~~~~~~~~-~~~-------~~~~~~~ 674 (826)
...+.+.++++|++|+++|++++++|||++..+..+. ++++ +.. + ..+|..+.. ++. ..+....
T Consensus 43 ~~~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~ 122 (301)
T 2b30_A 43 DIKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVYDQIGYTLLDETIETDVYAE 122 (301)
T ss_dssp TTCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEEECTTCCEEEECCCCHHHHHH
T ss_pred CCccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhcccccCCCeEEEcCCeEEEeCCCCEEEEccCCHHHHHH
Confidence 3468899999999999999999999999999999999 8887 652 1 123333332 222 2222222
Q ss_pred HHHHHHH-Hc-c--cc--c------CC--C-------------------------CceEEEE--cChhHHHHHHHHHHHH
Q 003364 675 SLERVLL-TM-R--IT--T------SE--P-------------------------KDVAFVV--DGWALEIALKHYRKAF 713 (826)
Q Consensus 675 ~~~~~~~-~~-~--~~--~------~~--~-------------------------~~~~l~~--~g~~~~~~~~~~~~~~ 713 (826)
.+..... .+ . .. . .. . ....+.+ .......+.+.+.+.+
T Consensus 123 i~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~l~~~~ 202 (301)
T 2b30_A 123 LISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLMIVLDPSESKTVIGNLKQKF 202 (301)
T ss_dssp HHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHTTCCCCSEEEECCCTTTHHHHHHHHHHHS
T ss_pred HHHHHHHcCCceEEEEEeCCEEEEcCchHHHHHHHHhhccCCceeecchhhhccCCceEEEEECCHHHHHHHHHHHHHHh
Confidence 2222211 01 0 00 0 00 0 0001111 1112223333333333
Q ss_pred -hhhccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhcccccc
Q 003364 714 -TELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIG 786 (826)
Q Consensus 714 -~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~ 786 (826)
..+....+...+.++.|. +|+..++.+.+ ..+++++|||+.||++|++.||+|||| +|+.+++++.||+++.
T Consensus 203 ~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~na~~~~k~~a~~v~~ 281 (301)
T 2b30_A 203 KNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAV-ANATDSAKSHAKCVLP 281 (301)
T ss_dssp TTTEEEEECTTSCEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEEC-TTCCHHHHHHSSEECS
T ss_pred cCCEEEEEeCCcceEecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEE-cCCcHHHHhhCCEEEc
Confidence 223333333456788887 69987777654 357899999999999999999999999 8999999999999998
Q ss_pred -ch
Q 003364 787 -KF 788 (826)
Q Consensus 787 -~~ 788 (826)
++
T Consensus 282 ~~~ 284 (301)
T 2b30_A 282 VSH 284 (301)
T ss_dssp SCT
T ss_pred cCC
Confidence 65
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.28 E-value=3.4e-12 Score=131.91 Aligned_cols=175 Identities=11% Similarity=0.125 Sum_probs=108.3
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCC-C--CCCCcEEEe-cC-------CCHHHHHHHHHHHH
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS-P--EPKGQLLSI-DG-------KTEDEVCRSLERVL 680 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~-~--~~~~~~~~~-~~-------~~~~~~~~~~~~~~ 680 (826)
..+.+.++++|++ +++|++++++|||+...+..+.+.+|+.. + ..+|..+.. ++ ...+.....+....
T Consensus 18 ~~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~~~ 96 (268)
T 1nf2_A 18 LEISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIK 96 (268)
T ss_dssp SCCCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTEEEEECCBCHHHHHHHHHHHG
T ss_pred CccCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECCCCCEEEecCCCHHHHHHHHHHHH
Confidence 4588899999999 99999999999999999999999999854 2 122333322 22 22222222222211
Q ss_pred HH-ccc--ccC--------------------C--------------CCceEEEEcC--hhHHHHHHHHHHHH-hhhcccc
Q 003364 681 LT-MRI--TTS--------------------E--------------PKDVAFVVDG--WALEIALKHYRKAF-TELAILS 720 (826)
Q Consensus 681 ~~-~~~--~~~--------------------~--------------~~~~~l~~~g--~~~~~~~~~~~~~~-~~~~~~~ 720 (826)
.. ... ... . .....+.+.+ .....+.+.+.+.+ ..+....
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 176 (268)
T 1nf2_A 97 PLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFK 176 (268)
T ss_dssp GGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEECCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred hCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCHHHhcccCCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 10 000 000 0 0000111111 11222222233333 2233333
Q ss_pred ceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 721 RTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 721 ~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
....+.++.|. +|+..++.+.+ ..+++++|||+.||++|++.||+|++| +|+.+++++.||+++.++
T Consensus 177 s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~-~n~~~~~~~~a~~v~~~~ 249 (268)
T 1nf2_A 177 SFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM-ENAIEKVKEASDIVTLTN 249 (268)
T ss_dssp EETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC-TTSCHHHHHHCSEECCCT
T ss_pred ecCceEEEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEe-cCCCHHHHhhCCEEEccC
Confidence 33446788886 69877766654 457899999999999999999999999 899999999999999765
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=9.1e-12 Score=126.62 Aligned_cols=171 Identities=14% Similarity=0.208 Sum_probs=104.7
Q ss_pred CchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC----CCCCcEEEecCC-CHHHHH--------HHHHHHHHH
Q 003364 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP----EPKGQLLSIDGK-TEDEVC--------RSLERVLLT 682 (826)
Q Consensus 616 ~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~----~~~~~~~~~~~~-~~~~~~--------~~~~~~~~~ 682 (826)
+.++++|++++ +|++++++|||++..+..+.+++++..+ ..+|..+..... ...... .........
T Consensus 22 ~~~~~~l~~~~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (244)
T 1s2o_A 22 EHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADG 100 (244)
T ss_dssp HHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHT
T ss_pred HHHHHHHHHhc-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEECCCcEEEeCCCcChHHHHHHhccccHHHHHHHHHh
Confidence 56777888865 6899999999999999999999887532 223444433210 111000 001111111
Q ss_pred ccc---c---cCCCCceEEEEcChhHHHHHHHHHHHHh----hhccccceeEEEEeCcc--cHHHHHHHhhc----CCCe
Q 003364 683 MRI---T---TSEPKDVAFVVDGWALEIALKHYRKAFT----ELAILSRTAICCRVTPS--QKAQLVELLKS----CDYR 746 (826)
Q Consensus 683 ~~~---~---~~~~~~~~l~~~g~~~~~~~~~~~~~~~----~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~ 746 (826)
... . .....+..+...........+.+.+.+. .+....+...+.++.|. +|+..++.+.+ ..++
T Consensus 101 ~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~ 180 (244)
T 1s2o_A 101 FEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQ 180 (244)
T ss_dssp CTTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGG
T ss_pred ccCccccCcccCCCeEEEEEeChhhHHHHHHHHHHHHHhcCCCeEEEEecCceEEeccCCCChHHHHHHHHHHhCCCHHH
Confidence 100 0 0112233333333322233333444332 23322333456788887 69887777654 3578
Q ss_pred EEEEcCCcccHHhHHhCCccEEecCCchHHHHhh-------ccccccch
Q 003364 747 TLAIGDGGNDVRMIQKADIGVGISGREGLQAARA-------ADYSIGKF 788 (826)
Q Consensus 747 v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~-------Ad~v~~~~ 788 (826)
+++|||+.||++|++.||+||+| +|+.+++++. |++++.++
T Consensus 181 ~~~~GD~~nD~~m~~~~g~~va~-~na~~~~k~~a~~~~~~a~~v~~~~ 228 (244)
T 1s2o_A 181 TLVCGDSGNDIGLFETSARGVIV-RNAQPELLHWYDQWGDSRHYRAQSS 228 (244)
T ss_dssp EEEEECSGGGHHHHTSSSEEEEC-TTCCHHHHHHHHHHCCTTEEECSSC
T ss_pred EEEECCchhhHHHHhccCcEEEE-cCCcHHHHHHHhcccccceeecCCc
Confidence 99999999999999999999999 8999999985 88999765
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.25 E-value=1.8e-11 Score=124.90 Aligned_cols=167 Identities=14% Similarity=0.090 Sum_probs=101.0
Q ss_pred CchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEe---------------------cCCCHHHH
Q 003364 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSI---------------------DGKTEDEV 672 (826)
Q Consensus 616 ~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~---------------------~~~~~~~~ 672 (826)
+.++++|++|+++|++++++|||+...+..+.+.+|+..+ ..+|..+.. .....+..
T Consensus 20 ~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~ 99 (249)
T 2zos_A 20 DPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIRVEKI 99 (249)
T ss_dssp GGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCCSCEEETTTTEEECCTTCCC------CCCCCCEEECSCCHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCccEEEeCCeEEEccCCcccccccccccCceEEEecCCCHHHH
Confidence 4599999999999999999999999999999999887432 223333332 12222222
Q ss_pred HHHHHHHHHH--c---c------------cccC-------CCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEe
Q 003364 673 CRSLERVLLT--M---R------------ITTS-------EPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV 728 (826)
Q Consensus 673 ~~~~~~~~~~--~---~------------~~~~-------~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 728 (826)
...+....+. + . .... ......++..+.... .+.+.+ . .+..... ..+.++
T Consensus 100 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~-~-~~~~~~s-~~~~ei 174 (249)
T 2zos_A 100 REELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGW--EEVLVE-G-GFKVTMG-SRFYTV 174 (249)
T ss_dssp HHHHHHHHHHHTCEEGGGSCHHHHHHHHCCCTTTHHHHHCCSSCEEEEECSSSCH--HHHHHH-T-TCEEEEC-SSSEEE
T ss_pred HHHHHHHHhhcCEEEecCCCHHHHHHHhCCChhHhhhhhhhhhcCceEecCCHHH--HHHHHh-C-CEEEEec-CCeEEE
Confidence 2222221111 0 0 0000 000111222222111 111211 1 2222222 224677
Q ss_pred Cc-ccHHHHHHHhhc-----CCCeEEEEcCCcccHHhHHhCCccEEecCCch-HHHHhhccccccch
Q 003364 729 TP-SQKAQLVELLKS-----CDYRTLAIGDGGNDVRMIQKADIGVGISGREG-LQAARAADYSIGKF 788 (826)
Q Consensus 729 ~p-~~K~~iv~~l~~-----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~-~~~~~~Ad~v~~~~ 788 (826)
.| .+|+..++.+.+ ..++|++|||+.||++||+.||+|||| ||+. +++++.||+++.+.
T Consensus 175 ~~g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~-gna~~~~~~~~a~~v~~~~ 240 (249)
T 2zos_A 175 HGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV-GSLKHKKAQNVSSIIDVLE 240 (249)
T ss_dssp ECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE-SSCCCTTEEEESSHHHHHH
T ss_pred eCCCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEe-CCCCccccchhceEEeccc
Confidence 77 249876666543 457899999999999999999999999 8987 67888999998664
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.23 E-value=7.7e-11 Score=123.15 Aligned_cols=72 Identities=25% Similarity=0.241 Sum_probs=58.3
Q ss_pred hccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 716 LAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 716 ~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
+....+...+.++.|. +|+..++.+.+ ..+++++|||+.||++|++.||+||+| +|+.+++++.||+++.++
T Consensus 198 ~~~~~s~~~~lei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~~~~~~~~~~a~~v~~~~ 275 (288)
T 1nrw_A 198 LTLVSSAEHNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAM-GNAREDIKSIADAVTLTN 275 (288)
T ss_dssp EEEECSSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEEC-TTCCHHHHHHCSEECCCG
T ss_pred EEEEeeCCCcEEEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEE-cCCCHHHHhhCceeecCC
Confidence 3333344456788887 59877666654 457899999999999999999999999 899999999999999765
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.4e-11 Score=116.29 Aligned_cols=108 Identities=18% Similarity=0.160 Sum_probs=85.2
Q ss_pred cCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHH--HcCCCCCCCCCcEEEecCCCHHHHHHHHH
Q 003364 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIAL--SCNFISPEPKGQLLSIDGKTEDEVCRSLE 677 (826)
Q Consensus 600 ~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~--~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (826)
.+...++.+.++|. .+|+.|+++|+++.++||+ ..+..+++ .+|+.
T Consensus 29 ~~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------ 76 (168)
T 3ewi_A 29 GDQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------ 76 (168)
T ss_dssp SSCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC------------------------
T ss_pred CCCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE------------------------
Confidence 34456777777766 3899999999999999999 67788888 55541
Q ss_pred HHHHHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhh----cCCCeEEEEcCC
Q 003364 678 RVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLK----SCDYRTLAIGDG 753 (826)
Q Consensus 678 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~----~~~~~v~~iGDg 753 (826)
++ ..+.+|...++.+. ..++++++|||+
T Consensus 77 ----------------------------------------------~~--~g~~~K~~~l~~~~~~~gi~~~~~~~vGD~ 108 (168)
T 3ewi_A 77 ----------------------------------------------TE--VSVSDKLATVDEWRKEMGLCWKEVAYLGNE 108 (168)
T ss_dssp ----------------------------------------------EE--CSCSCHHHHHHHHHHHTTCCGGGEEEECCS
T ss_pred ----------------------------------------------EE--ECCCChHHHHHHHHHHcCcChHHEEEEeCC
Confidence 11 12346776555544 346899999999
Q ss_pred cccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 754 GNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 754 ~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
.||++|++.||++++| +|+.+++++.||+++.++
T Consensus 109 ~nDi~~~~~ag~~~a~-~na~~~~k~~Ad~v~~~~ 142 (168)
T 3ewi_A 109 VSDEECLKRVGLSAVP-ADACSGAQKAVGYICKCS 142 (168)
T ss_dssp GGGHHHHHHSSEEEEC-TTCCHHHHTTCSEECSSC
T ss_pred HhHHHHHHHCCCEEEe-CChhHHHHHhCCEEeCCC
Confidence 9999999999999999 999999999999999754
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.1e-11 Score=120.60 Aligned_cols=98 Identities=20% Similarity=0.173 Sum_probs=80.3
Q ss_pred HHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEc
Q 003364 619 PETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVD 698 (826)
Q Consensus 619 ~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 698 (826)
..+|+.|+++|++++++||++...+..+++++|+..
T Consensus 58 ~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~-------------------------------------------- 93 (195)
T 3n07_A 58 GYGVKALMNAGIEIAIITGRRSQIVENRMKALGISL-------------------------------------------- 93 (195)
T ss_dssp HHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE--------------------------------------------
T ss_pred HHHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE--------------------------------------------
Confidence 345999999999999999999999999999999821
Q ss_pred ChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHH----HHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCch
Q 003364 699 GWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQ----LVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREG 774 (826)
Q Consensus 699 g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~----iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~ 774 (826)
+|... +.|.. +++.++...+++++|||+.||++|++.||++++| +|+.
T Consensus 94 -------------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~-~na~ 145 (195)
T 3n07_A 94 -------------------------IYQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCV-ADGH 145 (195)
T ss_dssp -------------------------EECSC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEEC-TTSC
T ss_pred -------------------------EeeCC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEE-CChH
Confidence 11111 34554 4444455578999999999999999999999999 8999
Q ss_pred HHHHhhccccccch
Q 003364 775 LQAARAADYSIGKF 788 (826)
Q Consensus 775 ~~~~~~Ad~v~~~~ 788 (826)
+.+++.||+++.+.
T Consensus 146 ~~~~~~ad~v~~~~ 159 (195)
T 3n07_A 146 PLLAQRANYVTHIK 159 (195)
T ss_dssp HHHHHHCSEECSSC
T ss_pred HHHHHhCCEEEcCC
Confidence 99999999999654
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=2.8e-11 Score=116.71 Aligned_cols=128 Identities=11% Similarity=0.043 Sum_probs=96.7
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCce
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 693 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (826)
+.+.+.++|++|+++|++++++||++...+..+++.+|+..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------------- 76 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------- 76 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------------------
Confidence 44567899999999999999999999999999999999721
Q ss_pred EEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHH----HhhcCCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 694 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVE----LLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 694 ~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~----~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
++. ....|...++ .++...+++++|||+.||++|++.||++++|
T Consensus 77 ------------------------------~~~--~~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~ 124 (180)
T 1k1e_A 77 ------------------------------FFL--GKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAV 124 (180)
T ss_dssp ------------------------------EEE--SCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred ------------------------------eec--CCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEe
Confidence 111 1234555444 4444558899999999999999999999999
Q ss_pred cCCchHHHHhhccccccchh------cchhheeecchhhHHHHHHHHHHHh
Q 003364 770 SGREGLQAARAADYSIGKFR------FLKRLILVHGRYSYNRTAFLSQYSF 814 (826)
Q Consensus 770 ~gn~~~~~~~~Ad~v~~~~~------~l~~l~l~~gr~~~~~~~~~~~~~~ 814 (826)
+++.+.++..||+++.+.. .+.+. ++..|..++++...+.|.+
T Consensus 125 -~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~-~l~~~~~~~~~~~~~~~~~ 173 (180)
T 1k1e_A 125 -ADAPIYVKNAVDHVLSTHGGKGAFREMSDM-ILQAQGKSSVFDTAQGFLK 173 (180)
T ss_dssp -TTSCHHHHTTSSEECSSCTTTTHHHHHHHH-HHHHTTCTHHHHCHHHHHH
T ss_pred -CCccHHHHhhCCEEecCCCCCcHHHHHHHH-HHHhcCchhhhhhccchhh
Confidence 8888888889999997652 22232 2345556777776666654
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.20 E-value=1.4e-11 Score=124.27 Aligned_cols=173 Identities=17% Similarity=0.218 Sum_probs=105.8
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEecCCC-----HHHHHHHHHHHHHHc-
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGKT-----EDEVCRSLERVLLTM- 683 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~- 683 (826)
..+.+.+.+++++++++|++++++|||+...+..+.+.+|+..+ ..+|..+..++.. .+.....+.......
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 46889999999999999999999999999999999999887432 1122222211111 122222222222111
Q ss_pred ccccC-----CCCceEEEEc-ChhHHHHHHHHHHHHh-hhccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEE
Q 003364 684 RITTS-----EPKDVAFVVD-GWALEIALKHYRKAFT-ELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAI 750 (826)
Q Consensus 684 ~~~~~-----~~~~~~l~~~-g~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~i 750 (826)
..... ...... +.. +...+. .+...+.+. .+... ....+.++.|. .|+..++.+.+ ..+++++|
T Consensus 99 ~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~i 175 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLV-IMRETINVET-VREIINELNLNLVAV-DSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHV 175 (231)
T ss_dssp TCCBCTTGGGCSSCEE-ECTTTSCHHH-HHHHHHHTTCSCEEE-ECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEE
T ss_pred CceEEecCCCceeeEE-EECCCCCHHH-HHHHHHhcCCcEEEE-ecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEE
Confidence 11000 000111 222 112222 222333332 12222 22334677665 58776665543 46789999
Q ss_pred cCCcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 751 GDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 751 GDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
||+.||++|++.||++++| +|+.+++++.||+++.++
T Consensus 176 GD~~nD~~~~~~ag~~v~~-~~~~~~~~~~a~~v~~~~ 212 (231)
T 1wr8_A 176 GDGENDLDAFKVVGYKVAV-AQAPKILKENADYVTKKE 212 (231)
T ss_dssp ECSGGGHHHHHHSSEEEEC-TTSCHHHHTTCSEECSSC
T ss_pred CCCHHHHHHHHHcCCeEEe-cCCCHHHHhhCCEEecCC
Confidence 9999999999999999999 898888988999999765
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.17 E-value=1.7e-10 Score=119.40 Aligned_cols=173 Identities=14% Similarity=0.203 Sum_probs=95.3
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCC-C--CCCCcEEEecC--C------------CHHHHHH
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS-P--EPKGQLLSIDG--K------------TEDEVCR 674 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~-~--~~~~~~~~~~~--~------------~~~~~~~ 674 (826)
+.+.+.++++|++|+++|++++++|||++..+..+++++|+.. + ..+|..+..++ . ..+....
T Consensus 25 ~~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~l~~~~~~~ 104 (275)
T 1xvi_A 25 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISL 104 (275)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCTTSTTTTEEECSSCHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCcccccCceEEEecCCCHHHHHH
Confidence 3567889999999999999999999999999999999999754 2 23444544221 1 1122222
Q ss_pred HHHHHHHH--cccc--c----------------------CCCCceEEEEcCh--hHHHHHHHHHHHHhhhccccceeEEE
Q 003364 675 SLERVLLT--MRIT--T----------------------SEPKDVAFVVDGW--ALEIALKHYRKAFTELAILSRTAICC 726 (826)
Q Consensus 675 ~~~~~~~~--~~~~--~----------------------~~~~~~~l~~~g~--~~~~~~~~~~~~~~~~~~~~~~~i~~ 726 (826)
.+...... .... . .......+...+. ..+.+.+.+.. . .+.... ...+.
T Consensus 105 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~~-~~~~l 181 (275)
T 1xvi_A 105 VLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNE-L-GLQFMQ-GARFW 181 (275)
T ss_dssp HHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHHHHHHHH-T-TEEEEE-CSSCE
T ss_pred HHHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCHHHHHHHHHHHHh-h-CeEEEE-CCceE
Confidence 22211110 0000 0 0011112233222 12222222221 1 222222 23467
Q ss_pred EeCcc--cHHHHHHHhh-----cCCCe--EEEEcCCcccHHhHHhCCccEEecCCch---HHHHhh--cc-ccccch
Q 003364 727 RVTPS--QKAQLVELLK-----SCDYR--TLAIGDGGNDVRMIQKADIGVGISGREG---LQAARA--AD-YSIGKF 788 (826)
Q Consensus 727 ~~~p~--~K~~iv~~l~-----~~~~~--v~~iGDg~ND~~ml~~A~vgIam~gn~~---~~~~~~--Ad-~v~~~~ 788 (826)
++.|. +|+..++.+. ...++ +++|||+.||++|++.||+|||| +|+. +++++. || +++.++
T Consensus 182 eI~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~n~~~~~~~~~~~~~a~~~v~~~~ 257 (275)
T 1xvi_A 182 HVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIV-KGLNREGVHLHDEDPARVWRTQRE 257 (275)
T ss_dssp EEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEEC-CCCC--------------------
T ss_pred EEecCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEe-cCCCccchhhccccCCceeEccCC
Confidence 88887 6987665544 34567 99999999999999999999999 8887 566653 78 888654
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=8.5e-11 Score=120.87 Aligned_cols=66 Identities=18% Similarity=0.241 Sum_probs=56.0
Q ss_pred eEEEEeCcc--cHHHHHHHh-hcCCCeEEEEcC----CcccHHhHHhCC-ccEEecCCchHHHHhhccccccchh
Q 003364 723 AICCRVTPS--QKAQLVELL-KSCDYRTLAIGD----GGNDVRMIQKAD-IGVGISGREGLQAARAADYSIGKFR 789 (826)
Q Consensus 723 ~i~~~~~p~--~K~~iv~~l-~~~~~~v~~iGD----g~ND~~ml~~A~-vgIam~gn~~~~~~~~Ad~v~~~~~ 789 (826)
..+.++.|. +|+..++.| +...++|++||| +.||++||+.|+ +|++| +|+.+++++.||+++.+++
T Consensus 186 ~~~leI~~~~vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av-~NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 186 MISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV-VSPQDTVQRCREIFFPETA 259 (262)
T ss_dssp SSCEEEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC-SSHHHHHHHHHHHHCTTC-
T ss_pred CcEEEEecCCCCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEe-cCCCHHHHHhhheeCCCCc
Confidence 345788887 699988888 224689999999 999999999999 59999 9999999999999997653
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.10 E-value=1.3e-10 Score=119.63 Aligned_cols=65 Identities=31% Similarity=0.446 Sum_probs=53.7
Q ss_pred EEEeCcc--cHHHHHHHhh----cCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccchhc
Q 003364 725 CCRVTPS--QKAQLVELLK----SCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (826)
Q Consensus 725 ~~~~~p~--~K~~iv~~l~----~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~~~ 790 (826)
+.++.|. .|+..++.+. ...+++++|||+.||++|++.||+|++| +|+.++++..||+++.+++.
T Consensus 178 ~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~-~n~~~~~~~~a~~v~~~~~~ 248 (261)
T 2rbk_A 178 FADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM-GQAKEDVKAAADYVTAPIDE 248 (261)
T ss_dssp CCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHSSEECCCGGG
T ss_pred eEEecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe-cCccHHHHhhCCEEeccCch
Confidence 4566665 5876655554 4567899999999999999999999999 89999999999999987755
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.10 E-value=7.5e-11 Score=114.69 Aligned_cols=117 Identities=19% Similarity=0.164 Sum_probs=89.3
Q ss_pred HHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcCh
Q 003364 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (826)
Q Consensus 621 aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 700 (826)
+|+.|+++|++++++||++...+..+++.+|+..
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~---------------------------------------------- 87 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH---------------------------------------------- 87 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc----------------------------------------------
Confidence 3999999999999999999999999999999832
Q ss_pred hHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHH
Q 003364 701 ALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 778 (826)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~ 778 (826)
++..+.|+ -...+++.++..++++++|||+.||++|++.||++++| +++.+.++
T Consensus 88 -----------------------~~~~~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~-~~~~~~~~ 143 (191)
T 3n1u_A 88 -----------------------YYKGQVDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAV-SNAVPQVL 143 (191)
T ss_dssp -----------------------EECSCSSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTCCHHHH
T ss_pred -----------------------ceeCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEe-CCccHHHH
Confidence 11111222 23456666666778999999999999999999999999 88888899
Q ss_pred hhccccccch------hcchhheeecchhhHHHHHH
Q 003364 779 RAADYSIGKF------RFLKRLILVHGRYSYNRTAF 808 (826)
Q Consensus 779 ~~Ad~v~~~~------~~l~~l~l~~gr~~~~~~~~ 808 (826)
..||+++.+. ..+.++ +...|..+.++..
T Consensus 144 ~~ad~v~~~~~~~g~~~~l~~~-ll~~~~~~~~~~~ 178 (191)
T 3n1u_A 144 EFADWRTERTGGRGAVRELCDL-ILNAQNKAELAIT 178 (191)
T ss_dssp HHSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHH
T ss_pred HhCCEEecCCCCCcHHHHHHHH-HHHhcCcHHHHHH
Confidence 9999999763 344443 3345555555433
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.7e-10 Score=110.57 Aligned_cols=103 Identities=18% Similarity=0.176 Sum_probs=83.5
Q ss_pred HHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcCh
Q 003364 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (826)
Q Consensus 621 aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 700 (826)
+|+.|+++|++++++||++...+..+++.+|+.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~----------------------------------------------- 79 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP----------------------------------------------- 79 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-----------------------------------------------
Confidence 899999999999999999999999999999972
Q ss_pred hHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHh----hcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHH
Q 003364 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL----KSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 776 (826)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l----~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~ 776 (826)
++.. ...|...++.+ +...++++++||+.||++|++.||++++| +++.+.
T Consensus 80 -----------------------~~~~--~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~-~~~~~~ 133 (176)
T 3mmz_A 80 -----------------------VLHG--IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAV-ASAHDV 133 (176)
T ss_dssp -----------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTCCHH
T ss_pred -----------------------eEeC--CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEEC-CChhHH
Confidence 1111 14566555444 33467899999999999999999999999 888888
Q ss_pred HHhhccccccc------hhcchhhee
Q 003364 777 AARAADYSIGK------FRFLKRLIL 796 (826)
Q Consensus 777 ~~~~Ad~v~~~------~~~l~~l~l 796 (826)
+++.||+++.+ ...+.++++
T Consensus 134 ~~~~ad~v~~~~~~~g~~~~l~~~l~ 159 (176)
T 3mmz_A 134 VRGAARAVTTVPGGDGAIREIASWIL 159 (176)
T ss_dssp HHHHSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 88999999977 455655443
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=99.07 E-value=2.5e-10 Score=116.27 Aligned_cols=61 Identities=18% Similarity=0.177 Sum_probs=51.2
Q ss_pred EEEEeCcc--cHHHHHHHh-hcCCCeEEEEcC----CcccHHhHHhCCc-cEEecCCchHHHHhhccccc
Q 003364 724 ICCRVTPS--QKAQLVELL-KSCDYRTLAIGD----GGNDVRMIQKADI-GVGISGREGLQAARAADYSI 785 (826)
Q Consensus 724 i~~~~~p~--~K~~iv~~l-~~~~~~v~~iGD----g~ND~~ml~~A~v-gIam~gn~~~~~~~~Ad~v~ 785 (826)
.+.++.|. +|+..++.+ +...++|++||| |.||++||+.||. |++| +|+.+++|+.||||.
T Consensus 178 ~~leI~~~~~~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av-~Na~~~vk~~A~~v~ 246 (246)
T 2amy_A 178 ISFDVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSV-TAPEDTRRICELLFS 246 (246)
T ss_dssp TEEEEEETTCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEEC-SSHHHHHHHHHHHCC
T ss_pred cEEEEecCCCchHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEe-eCCCHHHHHHHhhcC
Confidence 45788887 699888887 334689999999 9999999999998 9999 999999999999974
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.7e-10 Score=113.60 Aligned_cols=107 Identities=17% Similarity=0.121 Sum_probs=84.7
Q ss_pred EEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHc
Q 003364 604 VLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTM 683 (826)
Q Consensus 604 ~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (826)
.+..+.+.+.+ +|+.|+++|+++.++||++...+..+++.+|+..
T Consensus 73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~----------------------------- 117 (211)
T 3ij5_A 73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH----------------------------- 117 (211)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------
T ss_pred HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------
Confidence 44455555444 8999999999999999999999999999999821
Q ss_pred ccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHh----hcCCCeEEEEcCCcccHHh
Q 003364 684 RITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL----KSCDYRTLAIGDGGNDVRM 759 (826)
Q Consensus 684 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l----~~~~~~v~~iGDg~ND~~m 759 (826)
+|..+ ..|...++.+ +..++++++|||+.||++|
T Consensus 118 ----------------------------------------~f~~~--k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~ 155 (211)
T 3ij5_A 118 ----------------------------------------LYQGQ--SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPV 155 (211)
T ss_dssp ----------------------------------------EECSC--SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH
T ss_pred ----------------------------------------hhccc--CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHH
Confidence 11111 4565555444 4457899999999999999
Q ss_pred HHhCCccEEecCCchHHHHhhccccccch
Q 003364 760 IQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 760 l~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
++.||++++| +++.+.++..||+++.+.
T Consensus 156 ~~~ag~~~a~-~~~~~~~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 156 MAQVGLSVAV-ADAHPLLLPKAHYVTRIK 183 (211)
T ss_dssp HTTSSEEEEC-TTSCTTTGGGSSEECSSC
T ss_pred HHHCCCEEEe-CCccHHHHhhCCEEEeCC
Confidence 9999999999 888888888999999654
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=4.9e-10 Score=115.03 Aligned_cols=165 Identities=16% Similarity=0.152 Sum_probs=97.3
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEecC-------------------CCHHH
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDG-------------------KTEDE 671 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~~~-------------------~~~~~ 671 (826)
.+.+.+.++|++++++|++++++|||+...+. .+|+..+ ..+|..+.... ...+.
T Consensus 16 ~i~~~~~~al~~l~~~Gi~v~iaTGR~~~~~~----~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (259)
T 3zx4_A 16 GELGPAREALERLRALGVPVVPVTAKTRKEVE----ALGLEPPFIVENGGGLYLPRDWPVRAGRPKGGYRVVSLAWPYRK 91 (259)
T ss_dssp SSCSTTHHHHHHHHHTTCCEEEBCSSCHHHHH----HTTCCSSEEEGGGTEEEEETTCSSCCSEEETTEEEEECSCCHHH
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHH----HcCCCCcEEEECCcEEEeCCCCcccccccCCceEEEEcCCCHHH
Confidence 68899999999999999999999999998877 6776432 11233332222 22233
Q ss_pred HHHHHHHHHHHccc-----c---------------------cCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEE
Q 003364 672 VCRSLERVLLTMRI-----T---------------------TSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAIC 725 (826)
Q Consensus 672 ~~~~~~~~~~~~~~-----~---------------------~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~ 725 (826)
....+......... . ........+.........+.+.+.+. .+....... +
T Consensus 92 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~s~~-~ 168 (259)
T 3zx4_A 92 VRARLREAEALAGRPILGYGDLTAEAVARLTGLSREAARRAKAREYDETLVLCPEEVEAVLEALEAV--GLEWTHGGR-F 168 (259)
T ss_dssp HHHHHHHHHHHHTSCCCBGGGBCHHHHHHHHCCCHHHHHHHTCCSSCEEBCCCTTTHHHHHHHHHHT--TCEEEECSS-S
T ss_pred HHHHHHHHHHhcCceEEEcCCCCHHHHHHHcCCCHHHhhhhhccccceeEEeCcHHHHHHHHHHHHC--CcEEEecCc-e
Confidence 33322222211000 0 00000111111111223333332221 122222222 2
Q ss_pred EEeCcc-cHHHHHHHhhcC----C--CeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 726 CRVTPS-QKAQLVELLKSC----D--YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 726 ~~~~p~-~K~~iv~~l~~~----~--~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
.++.|. +|+..++.+.+. . +++++|||+.||++|++.||+|||| +|+.+ + .|++++.++
T Consensus 169 ~ei~~~~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~na~~-~--~~~~~~~~~ 234 (259)
T 3zx4_A 169 YHAAKGADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYV-GRGDP-P--EGVLATPAP 234 (259)
T ss_dssp EEEESSCCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEEC-SSSCC-C--TTCEECSSC
T ss_pred EEEcCCCCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEe-CChhh-c--CCcEEeCCC
Confidence 355554 788877777653 4 8899999999999999999999999 89887 5 678888654
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=4.5e-10 Score=113.84 Aligned_cols=168 Identities=17% Similarity=0.175 Sum_probs=99.8
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC-----CC--CCCCcEEEecCCC-----------HHHHH
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI-----SP--EPKGQLLSIDGKT-----------EDEVC 673 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~-----~~--~~~~~~~~~~~~~-----------~~~~~ 673 (826)
..+.+.++++|++|+++|++++++|||++... .+.++.. .+ ..+|..+...++. .+...
T Consensus 20 ~~i~~~~~~~l~~l~~~g~~~~iaTGR~~~~~---~~~l~~~~~~~~~~~i~~NGa~i~~~~~~i~~~~i~~~l~~~~~~ 96 (246)
T 3f9r_A 20 LCQTDEMRALIKRARGAGFCVGTVGGSDFAKQ---VEQLGRDVLTQFDYVFAENGLLAYRNGLEIHRQSLLNALGNDRIV 96 (246)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHCTTHHHHCSEEEEGGGTEEEETTEEEEECCHHHHTCHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCCHHHH---HHHhhhhccccCCEEEECCCcEEEECCEEEEEeeccccCCHHHHH
Confidence 36889999999999999999999999999854 4455531 11 2233344333322 11222
Q ss_pred HHHHHHH---HHcccccCCCC-----ceEEEEc--Ch--------h----------HHHHHHHHHHHHhhh--cccccee
Q 003364 674 RSLERVL---LTMRITTSEPK-----DVAFVVD--GW--------A----------LEIALKHYRKAFTEL--AILSRTA 723 (826)
Q Consensus 674 ~~~~~~~---~~~~~~~~~~~-----~~~l~~~--g~--------~----------~~~~~~~~~~~~~~~--~~~~~~~ 723 (826)
..++... ........... ...+... +. . .+.+.+.+.+.+... ....+..
T Consensus 97 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~sg~ 176 (246)
T 3f9r_A 97 KFVKKTLRLIADLDIPVQRGTFVEYRNGMINVSPIGRNCSQAERDEFEVYDNEHRVRASLIAELENSFPDFGLKYSIGGQ 176 (246)
T ss_dssp HHHHHHHHHHHTCCCSCCCSCCEEECSSCEEECSSCTTSCHHHHHHHHHHHHHHCHHHHHHHHHHHHCGGGCEEEEEETT
T ss_pred HHHHHHHhhhhceeeecCCceEEEeecceeccccccccCchhhceeeeEecccchHHHHHHHHHHhhCcCCcEEEEecCC
Confidence 2222111 11111110000 0001110 00 0 011122233344332 2344556
Q ss_pred EEEEeCcc--cHHHHHHHhhcCCCeEEEEcC----CcccHHhHHhCC-ccEEecCCchHHHHhhccc
Q 003364 724 ICCRVTPS--QKAQLVELLKSCDYRTLAIGD----GGNDVRMIQKAD-IGVGISGREGLQAARAADY 783 (826)
Q Consensus 724 i~~~~~p~--~K~~iv~~l~~~~~~v~~iGD----g~ND~~ml~~A~-vgIam~gn~~~~~~~~Ad~ 783 (826)
.+.++.|. +|+..++.|.+..++|++||| |.||++||+.|+ +|++| +|+.+.++..+.+
T Consensus 177 ~~leI~~~gv~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v-~n~~~~~~~~~~~ 242 (246)
T 3f9r_A 177 ISFDVFPVGWDKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKV-TSYKDTIAEVEKI 242 (246)
T ss_dssp TEEEEEETTCSGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEEC-SSHHHHHHHHHHH
T ss_pred eEEEEEeCCCCHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEe-CCHHHHHHHHHHH
Confidence 68899987 699999998877789999999 699999999996 89999 8988877765544
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.99 E-value=3.3e-10 Score=121.12 Aligned_cols=145 Identities=19% Similarity=0.213 Sum_probs=93.6
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+++|+++.++||.+...+..+++.+|+...... .+.+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~--~l~~---------------------------- 227 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSN--TLEI---------------------------- 227 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEE----------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEee--eeEe----------------------------
Confidence 6889999999999999999999999999999999999998321100 0000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEE----e-CcccHH----HHHHHhhcCCCeEEEEcCCcccHHhHHhC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR----V-TPSQKA----QLVELLKSCDYRTLAIGDGGNDVRMIQKA 763 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~----~-~p~~K~----~iv~~l~~~~~~v~~iGDg~ND~~ml~~A 763 (826)
....+..+ + .++.|. .+++.++...+++++||||.||++|++.|
T Consensus 228 ---------------------------~d~~~tg~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~a 280 (335)
T 3n28_A 228 ---------------------------VSGKLTGQVLGEVVSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAA 280 (335)
T ss_dssp ---------------------------ETTEEEEEEESCCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred ---------------------------eCCeeeeeecccccChhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHC
Confidence 00001111 1 122344 45555565678999999999999999999
Q ss_pred CccEEecCCchHHHHhhccccccchhcchhhe--eecchhhHHHHHHHHHHHhhhh
Q 003364 764 DIGVGISGREGLQAARAADYSIGKFRFLKRLI--LVHGRYSYNRTAFLSQYSFYKS 817 (826)
Q Consensus 764 ~vgIam~gn~~~~~~~~Ad~v~~~~~~l~~l~--l~~gr~~~~~~~~~~~~~~~~~ 817 (826)
|+|++| |+.+.+++.||+++.. +.+..++ |......-.+++.++.|.+.+|
T Consensus 281 G~~va~--~~~~~~~~~a~~v~~~-~~l~~v~~~L~~~l~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 281 GLGVAY--HAKPKVEAKAQTAVRF-AGLGGVVCILSAALVAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp SEEEEE--SCCHHHHTTSSEEESS-SCTHHHHHHHHHHHHHTTCCCCC--------
T ss_pred CCeEEe--CCCHHHHhhCCEEEec-CCHHHHHHHHHhHHHHhhhhccccccccccc
Confidence 999999 6777888899998843 3332221 1122223345667777766554
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=6.5e-10 Score=105.31 Aligned_cols=95 Identities=21% Similarity=0.153 Sum_probs=78.7
Q ss_pred HHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcCh
Q 003364 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (826)
Q Consensus 621 aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 700 (826)
+++.|+++|++++++||++...+..+++.+|+..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------------------------- 72 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------------------------- 72 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999999732
Q ss_pred hHHHHHHHHHHHHhhhccccceeEEEEeCcccHH----HHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHH
Q 003364 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKA----QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 776 (826)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~----~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~ 776 (826)
++... +.|. .+++.++...++++++||+.||++|++.||+++++ +++.+.
T Consensus 73 -----------------------~~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~-~~~~~~ 126 (164)
T 3e8m_A 73 -----------------------LFQGV--VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVP-ASAPFY 126 (164)
T ss_dssp -----------------------EECSC--SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECC-TTSCHH
T ss_pred -----------------------eeccc--CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEc-CChHHH
Confidence 11111 3344 34555555678999999999999999999999999 888888
Q ss_pred HHhhccccccc
Q 003364 777 AARAADYSIGK 787 (826)
Q Consensus 777 ~~~~Ad~v~~~ 787 (826)
+++.||+++.+
T Consensus 127 ~~~~ad~v~~~ 137 (164)
T 3e8m_A 127 IRRLSTIFLEK 137 (164)
T ss_dssp HHTTCSSCCCC
T ss_pred HHHhCcEEecc
Confidence 88999999966
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=1.7e-09 Score=106.88 Aligned_cols=127 Identities=24% Similarity=0.284 Sum_probs=86.7
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
.++.++++++++.++++|++++++||++...+....+.+|+...... .+...
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------------------------- 126 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN--RLIVK-------------------------- 126 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEE--------------------------
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEe--eeEEE--------------------------
Confidence 35778999999999999999999999999888888888876211000 00000
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeC-cccHHHHHHHh----hcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT-PSQKAQLVELL----KSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-p~~K~~iv~~l----~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
++ .. ......+.. +..|...+..+ +...+++++|||+.||++|++.||++
T Consensus 127 ------~~------------------~~-~~~~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~ 181 (211)
T 1l7m_A 127 ------DG------------------KL-TGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLK 181 (211)
T ss_dssp ------TT------------------EE-EEEEECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEE
T ss_pred ------CC------------------EE-cCCcccCccCCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCE
Confidence 00 00 000111112 23576544443 34567899999999999999999999
Q ss_pred EEecCCchHHHHhhccccccc--hhcchh
Q 003364 767 VGISGREGLQAARAADYSIGK--FRFLKR 793 (826)
Q Consensus 767 Iam~gn~~~~~~~~Ad~v~~~--~~~l~~ 793 (826)
++| + +.++++..||+++.+ +..+..
T Consensus 182 ~~~-~-~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 182 IAF-C-AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp EEE-S-CCHHHHTTCSEEECSSCGGGGGG
T ss_pred EEE-C-CCHHHHhhcceeecchhHHHHHH
Confidence 999 5 566778899999987 555544
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.85 E-value=8.2e-09 Score=102.49 Aligned_cols=126 Identities=17% Similarity=0.196 Sum_probs=88.5
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
-++.|++.++++.|+++|++++++|+.+...+....+.+|+...-.. ++..+..
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~--~~~~~~~------------------------ 127 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSN--TLIVEND------------------------ 127 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEETT------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccc--eeEEeCC------------------------
Confidence 45889999999999999999999999999999999999887321100 0000000
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEe-CcccHHHH----HHHhhcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV-TPSQKAQL----VELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~p~~K~~i----v~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
.....+...+ ....|..+ ++.++...+++++|||+.||++|++.||++
T Consensus 128 ---------------------------~~~~~~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~ 180 (217)
T 3m1y_A 128 ---------------------------ALNGLVTGHMMFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIK 180 (217)
T ss_dssp ---------------------------EEEEEEEESCCSTTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEE
T ss_pred ---------------------------EEEeeeccCCCCCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCe
Confidence 0000011111 12346544 444455678899999999999999999999
Q ss_pred EEecCCchHHHHhhccccccchhcchh
Q 003364 767 VGISGREGLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 767 Iam~gn~~~~~~~~Ad~v~~~~~~l~~ 793 (826)
++| |+.+.+++.||+++.++ .|..
T Consensus 181 ~~~--~~~~~l~~~ad~v~~~~-dl~~ 204 (217)
T 3m1y_A 181 IAF--NAKEVLKQHATHCINEP-DLAL 204 (217)
T ss_dssp EEE--SCCHHHHTTCSEEECSS-BGGG
T ss_pred EEE--CccHHHHHhcceeeccc-CHHH
Confidence 999 66778899999999774 4433
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.85 E-value=1.4e-09 Score=106.56 Aligned_cols=117 Identities=22% Similarity=0.302 Sum_probs=89.7
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.++.|++.|++++++||.+...+..+ +.+|+... .. .+...
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~--~~~~~--------------------------- 127 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-AN--RAIFE--------------------------- 127 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EE--EEEEE---------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-ee--eEEee---------------------------
Confidence 7889999999999999999999999988877777 77776221 00 00000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn 772 (826)
..........|..|...++.+ ..+++++|||+.||++|++.||++|+| ++
T Consensus 128 ---------------------------~~~~~~~~~~~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~-~~ 177 (201)
T 4ap9_A 128 ---------------------------DGKFQGIRLRFRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAV-GR 177 (201)
T ss_dssp ---------------------------TTEEEEEECCSSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEE-SS
T ss_pred ---------------------------CCceECCcCCccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEE-CC
Confidence 000111345667899999988 678899999999999999999999999 77
Q ss_pred chHHHHhhccccccchhcchhh
Q 003364 773 EGLQAARAADYSIGKFRFLKRL 794 (826)
Q Consensus 773 ~~~~~~~~Ad~v~~~~~~l~~l 794 (826)
+.. .||+++.+++.+..+
T Consensus 178 ~~~----~ad~v~~~~~el~~~ 195 (201)
T 4ap9_A 178 EIP----GADLLVKDLKELVDF 195 (201)
T ss_dssp CCT----TCSEEESSHHHHHHH
T ss_pred CCc----cccEEEccHHHHHHH
Confidence 665 899999988776653
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.82 E-value=9.5e-09 Score=96.99 Aligned_cols=107 Identities=17% Similarity=0.112 Sum_probs=83.8
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.+++.++|++|+++|++++++||++...+..+++.+|+..
T Consensus 36 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-------------------------------------- 77 (162)
T 2p9j_A 36 VFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE-------------------------------------- 77 (162)
T ss_dssp EEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE--------------------------------------
T ss_pred eecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh--------------------------------------
Confidence 345778899999999999999999999999999999998721
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEec
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~ 770 (826)
.|....|. --..+++.++..+++++++||+.||++|.+.||+++++
T Consensus 78 -------------------------------~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~- 125 (162)
T 2p9j_A 78 -------------------------------IYTGSYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAV- 125 (162)
T ss_dssp -------------------------------EEECC--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-
T ss_pred -------------------------------hccCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEe-
Confidence 11111111 12235566666678899999999999999999999998
Q ss_pred CCchHHHHhhccccccchh
Q 003364 771 GREGLQAARAADYSIGKFR 789 (826)
Q Consensus 771 gn~~~~~~~~Ad~v~~~~~ 789 (826)
.++.+.++..||+++.+..
T Consensus 126 ~~~~~~~~~~a~~v~~~~~ 144 (162)
T 2p9j_A 126 RNAVEEVRKVAVYITQRNG 144 (162)
T ss_dssp TTSCHHHHHHCSEECSSCS
T ss_pred cCccHHHHhhCCEEecCCC
Confidence 7777778889999997654
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=2.8e-09 Score=104.95 Aligned_cols=122 Identities=18% Similarity=0.163 Sum_probs=92.4
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.+++.++++.|++.|++++++|+.....+....+.+|+........++
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~------------------------------ 119 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVL------------------------------ 119 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEE------------------------------
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEE------------------------------
Confidence 56799999999999999999999999999999999998873221000000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCc--ccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCc-cEEe
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVGI 769 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v-gIam 769 (826)
.... ..-.| .--..+++.++...+++++|||+.||++|.+.||+ +|+|
T Consensus 120 ---------------------------~~~~--~~~kp~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v 170 (205)
T 3m9l_A 120 ---------------------------GRDE--APPKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLV 170 (205)
T ss_dssp ---------------------------CTTT--SCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEC
T ss_pred ---------------------------eCCC--CCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEE
Confidence 0000 00011 11245677777777899999999999999999999 9999
Q ss_pred cCCchHHHHhhccccccchhcchhh
Q 003364 770 SGREGLQAARAADYSIGKFRFLKRL 794 (826)
Q Consensus 770 ~gn~~~~~~~~Ad~v~~~~~~l~~l 794 (826)
+++....+..||+++.++..|..+
T Consensus 171 -~~~~~~~~~~ad~v~~~~~el~~~ 194 (205)
T 3m9l_A 171 -NLPDNPWPELTDWHARDCAQLRDL 194 (205)
T ss_dssp -SSSSCSCGGGCSEECSSHHHHHHH
T ss_pred -eCCCCcccccCCEEeCCHHHHHHH
Confidence 888777788999999999888774
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=4.2e-09 Score=102.14 Aligned_cols=96 Identities=18% Similarity=0.145 Sum_probs=76.8
Q ss_pred HHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcCh
Q 003364 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (826)
Q Consensus 621 aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 700 (826)
+|+.|+++|++++++||++...+..+++.+|+..
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~---------------------------------------------- 94 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITH---------------------------------------------- 94 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce----------------------------------------------
Confidence 8999999999999999999999999999998721
Q ss_pred hHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHH----HHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHH
Q 003364 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQL----VELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 776 (826)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~i----v~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~ 776 (826)
+|. ....|... ++.++...+++++|||+.||++|++.||+++++ +++.+.
T Consensus 95 -----------------------~~~--~~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~-~~~~~~ 148 (188)
T 2r8e_A 95 -----------------------LYQ--GQSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAV-ADAHPL 148 (188)
T ss_dssp -----------------------EEC--SCSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEEC-TTSCTT
T ss_pred -----------------------eec--CCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEe-cCcCHH
Confidence 110 11334443 344444467899999999999999999999999 777777
Q ss_pred HHhhccccccch
Q 003364 777 AARAADYSIGKF 788 (826)
Q Consensus 777 ~~~~Ad~v~~~~ 788 (826)
++..||+++.+.
T Consensus 149 ~~~~ad~v~~~~ 160 (188)
T 2r8e_A 149 LIPRADYVTRIA 160 (188)
T ss_dssp TGGGSSEECSSC
T ss_pred HHhcCCEEEeCC
Confidence 778999999765
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.2e-08 Score=101.29 Aligned_cols=131 Identities=20% Similarity=0.233 Sum_probs=89.3
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCce
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 693 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (826)
+.|++.++++.|+++|++++++|+.+...+....+.+|+.... +.. .
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~----~~~-----------------------------~ 129 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPREN----IFA-----------------------------V 129 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGG----EEE-----------------------------E
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCccc----EEE-----------------------------e
Confidence 7899999999999999999999999999999999999873210 000 0
Q ss_pred EEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHH-hhcCCCeEEEEcCCcccHHhHHh----CCccEE
Q 003364 694 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVEL-LKSCDYRTLAIGDGGNDVRMIQK----ADIGVG 768 (826)
Q Consensus 694 ~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~-l~~~~~~v~~iGDg~ND~~ml~~----A~vgIa 768 (826)
.+...... ...........|..|...+.. ++...+++++|||+.||++|++. ++++++
T Consensus 130 ~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~ 192 (219)
T 3kd3_A 130 ETIWNSDG-----------------SFKELDNSNGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYM 192 (219)
T ss_dssp EEEECTTS-----------------BEEEEECTTSTTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEEC
T ss_pred eeeecCCC-----------------ceeccCCCCCCcccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEecc
Confidence 00000000 000000011123345555544 46678999999999999999976 455556
Q ss_pred ecCCchHHHHhhccccccchhcchhhe
Q 003364 769 ISGREGLQAARAADYSIGKFRFLKRLI 795 (826)
Q Consensus 769 m~gn~~~~~~~~Ad~v~~~~~~l~~l~ 795 (826)
| +++.+.++..||+++.++..+..++
T Consensus 193 ~-~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 193 E-HIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp S-SCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred C-ccccHHHHhhcceeeCCHHHHHHhh
Confidence 6 6777778889999999988887643
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.75 E-value=1.3e-08 Score=101.76 Aligned_cols=118 Identities=19% Similarity=0.218 Sum_probs=90.0
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.+++.+.++.|++.|++++++|+.....+....+.+|+...-+
T Consensus 86 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~----------------------------------- 130 (226)
T 3mc1_A 86 KVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFD----------------------------------- 130 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhee-----------------------------------
Confidence 578999999999999999999999999998999999888732111
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHH----HHHHHhhcCCCeEEEEcCCcccHHhHHhCCc-
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKA----QLVELLKSCDYRTLAIGDGGNDVRMIQKADI- 765 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~----~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v- 765 (826)
..+..+..+. .|. .+++.++...+++++|||+.||++|.+.||+
T Consensus 131 -----------------------------~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~ 181 (226)
T 3mc1_A 131 -----------------------------AIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLP 181 (226)
T ss_dssp -----------------------------EEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCC
T ss_pred -----------------------------eeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCC
Confidence 1122222222 243 4566666667899999999999999999999
Q ss_pred --cEEecCCch-HHH-Hhhccccccchhcchhhe
Q 003364 766 --GVGISGREG-LQA-ARAADYSIGKFRFLKRLI 795 (826)
Q Consensus 766 --gIam~gn~~-~~~-~~~Ad~v~~~~~~l~~l~ 795 (826)
+|+| |++. ++. +..||+++.++..|..++
T Consensus 182 ~i~v~~-g~~~~~~~~~~~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 182 SIGVTY-GFGSYEELKNAGANYIVNSVDELHKKI 214 (226)
T ss_dssp EEEESS-SSSCHHHHHHHTCSEEESSHHHHHHHH
T ss_pred EEEEcc-CCCCHHHHHHcCCCEEECCHHHHHHHH
Confidence 7777 6544 344 458999999999888754
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.74 E-value=1.8e-08 Score=100.49 Aligned_cols=117 Identities=11% Similarity=0.060 Sum_probs=87.0
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.+++.+.++.+++.|++++++|+.+...+....+.+|+.....
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~----------------------------------- 138 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFD----------------------------------- 138 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCc-----------------------------------
Confidence 457899999999999999999999999888888888887632111
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeC------cccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT------PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
..+..+.. |.--..+++.++...+++++|||+.||++|++.||++
T Consensus 139 -----------------------------~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~ 189 (226)
T 1te2_A 139 -----------------------------ALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMR 189 (226)
T ss_dssp -----------------------------EEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCE
T ss_pred -----------------------------EEEeccccCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCE
Confidence 00111111 1122456677777788999999999999999999999
Q ss_pred EEec---CCchHHHHhhccccccchhcchh
Q 003364 767 VGIS---GREGLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 767 Iam~---gn~~~~~~~~Ad~v~~~~~~l~~ 793 (826)
++|. +|+.+.++..||+++.++..+..
T Consensus 190 ~~~~~~~~~~~~~~~~~a~~v~~~~~el~~ 219 (226)
T 1te2_A 190 SIVVPAPEAQNDPRFVLANVKLSSLTELTA 219 (226)
T ss_dssp EEECCCTTTTTCGGGGGSSEECSCGGGCCH
T ss_pred EEEEcCCCCcccccccccCeEECCHHHHhH
Confidence 9882 23444567789999998877755
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.72 E-value=1.4e-08 Score=102.34 Aligned_cols=125 Identities=23% Similarity=0.218 Sum_probs=91.0
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
..+.+++.+.++.|++.|++++++|+.....+..+.+.+|+....+.
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 149 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTV--------------------------------- 149 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheee---------------------------------
Confidence 35789999999999999999999999999999999988887432110
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCc---cEE
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI---GVG 768 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v---gIa 768 (826)
++.++. ... ..-.|.--..+++.++...+++++|||+.||++|++.||+ +|+
T Consensus 150 ----~~~~~~-----------------~~~----~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~ 204 (237)
T 4ex6_A 150 ----IAGDDS-----------------VER----GKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVS 204 (237)
T ss_dssp ----EECTTT-----------------SSS----CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEES
T ss_pred ----EEeCCC-----------------CCC----CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEe
Confidence 000000 000 0001111245777777778899999999999999999999 888
Q ss_pred ecCCchHHHHh-hccccccchhcchhh
Q 003364 769 ISGREGLQAAR-AADYSIGKFRFLKRL 794 (826)
Q Consensus 769 m~gn~~~~~~~-~Ad~v~~~~~~l~~l 794 (826)
|+.+..+++++ .||+++.++..|..+
T Consensus 205 ~g~~~~~~~~~~~ad~v~~~~~el~~~ 231 (237)
T 4ex6_A 205 YGVSGPDELMRAGADTVVDSFPAAVTA 231 (237)
T ss_dssp SSSSCHHHHHHTTCSEEESSHHHHHHH
T ss_pred cCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 83345567777 899999998888764
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.72 E-value=5.6e-09 Score=111.26 Aligned_cols=166 Identities=11% Similarity=0.121 Sum_probs=96.8
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCC-----CHHHHHHHHHHHHHHccccc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK-----TEDEVCRSLERVLLTMRITT 687 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 687 (826)
.+++++.++++.|++ |+.+.++||+....+...+..+++... +....-. ........+.....
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~k~~~~~~~------ 170 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGE-----LHGTEVDFDSIAVPEGLREELLSIID------ 170 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSE-----EEEEBCCGGGCCCCHHHHHHHHHHHH------
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhh-----hcccccchhhhccccccceeEEecCH------
Confidence 468999999999999 999999999987667777777766311 1110000 00010000000000
Q ss_pred CCCCceEEEEcChhHHHH-HHHHHHHHhhhccccce-eEEEE--eCc--ccHHHHHHHhhcCC--CeEEEEcCCcccHHh
Q 003364 688 SEPKDVAFVVDGWALEIA-LKHYRKAFTELAILSRT-AICCR--VTP--SQKAQLVELLKSCD--YRTLAIGDGGNDVRM 759 (826)
Q Consensus 688 ~~~~~~~l~~~g~~~~~~-~~~~~~~~~~~~~~~~~-~i~~~--~~p--~~K~~iv~~l~~~~--~~v~~iGDg~ND~~m 759 (826)
..+... .+.+ +.+..+ ..... ..+.+ +.| .+|+..++.+.... +.|++||||.||++|
T Consensus 171 ------------~~~~~~~~~~l-~~~~~~-~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~m 236 (332)
T 1y8a_A 171 ------------VIASLSGEELF-RKLDEL-FSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKM 236 (332)
T ss_dssp ------------HHHHCCHHHHH-HHHHHH-HHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHH
T ss_pred ------------HHHhhhhHHHH-HHHHHH-HhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHH
Confidence 000000 0001 111111 11100 01111 333 47998888554321 339999999999999
Q ss_pred HHhC----CccEEecCCchHHHHhhccccccch------hcchhheeecchhhHHHHHH
Q 003364 760 IQKA----DIGVGISGREGLQAARAADYSIGKF------RFLKRLILVHGRYSYNRTAF 808 (826)
Q Consensus 760 l~~A----~vgIam~gn~~~~~~~~Ad~v~~~~------~~l~~l~l~~gr~~~~~~~~ 808 (826)
|+.| |+|||| |+.+++++.||+++.++ +.|+++ +..||..+ ++.+
T Consensus 237 l~~A~~~~g~~vam--na~~~lk~~Ad~v~~~~~~dGV~~~l~~~-~~~~~~~~-~~~~ 291 (332)
T 1y8a_A 237 FEAARGLGGVAIAF--NGNEYALKHADVVIISPTAMSEAKVIELF-MERKERAF-EVLS 291 (332)
T ss_dssp HHHHHHTTCEEEEE--SCCHHHHTTCSEEEECSSTHHHHHHHHHH-HHHGGGGG-GGGG
T ss_pred HHHHhhcCCeEEEe--cCCHHHHhhCcEEecCCCCCHHHHHHHHH-HHcCCchh-HHHH
Confidence 9999 999999 78888999999999764 335553 46788777 5444
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.69 E-value=3.3e-08 Score=99.31 Aligned_cols=117 Identities=18% Similarity=0.171 Sum_probs=80.9
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|++.|+++.++|+.+. +....+.+|+...-+.
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~---------------------------------- 135 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHA---------------------------------- 135 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSE----------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCE----------------------------------
Confidence 4689999999999999999999999854 6777888887432210
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEE-EEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAIC-CRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g 771 (826)
++.+ ..+. ..-.|.--..+++.++...+++++|||+.||++|.+.||++++| .
T Consensus 136 ---i~~~----------------------~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~-~ 189 (233)
T 3nas_A 136 ---IVDP----------------------TTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVG-V 189 (233)
T ss_dssp ---ECCC-------------------------------CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEE-C
T ss_pred ---EeeH----------------------hhCCCCCCChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEE-E
Confidence 0000 0000 01112222467788887889999999999999999999999999 7
Q ss_pred CchHHHHhhccccccchhcch
Q 003364 772 REGLQAARAADYSIGKFRFLK 792 (826)
Q Consensus 772 n~~~~~~~~Ad~v~~~~~~l~ 792 (826)
|+.++++ .||+++.++..+.
T Consensus 190 ~~~~~~~-~ad~v~~s~~el~ 209 (233)
T 3nas_A 190 GQGQPML-GADLVVRQTSDLT 209 (233)
T ss_dssp C--------CSEECSSGGGCC
T ss_pred CCccccc-cCCEEeCChHhCC
Confidence 7777666 8999999887775
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.68 E-value=2.2e-08 Score=104.48 Aligned_cols=64 Identities=25% Similarity=0.309 Sum_probs=53.2
Q ss_pred EEEEeCcc--cHHHHHHHhh----cCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 724 ICCRVTPS--QKAQLVELLK----SCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 724 i~~~~~p~--~K~~iv~~l~----~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
.+.++.|. .|...++.+. ...+++++|||+.||++|++.||+|++| +|+.+++++.||+++.++
T Consensus 201 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~-~~~~~~~~~~a~~v~~~~ 270 (289)
T 3gyg_A 201 YDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLL-KNATQEAKNLHNLITDSE 270 (289)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC-TTCCHHHHHHCCCBCSSC
T ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEE-CCccHHHHHhCCEEcCCC
Confidence 56777765 5776555544 3567899999999999999999999999 999999999999999765
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.66 E-value=2.3e-08 Score=99.38 Aligned_cols=118 Identities=8% Similarity=0.033 Sum_probs=83.8
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.+++.+.++.+++.|++++++|+. ..+....+.+|+....+. +
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~---~------------------------------ 135 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDA---I------------------------------ 135 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSE---E------------------------------
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcce---E------------------------------
Confidence 46799999999999999999999998 445666777776321110 0
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn 772 (826)
+.+.. ... ..-.|.--..+++.++...+++++|||+.||++|++.||++++| .|
T Consensus 136 ----~~~~~-----------------~~~----~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~-~~ 189 (221)
T 2wf7_A 136 ----ADPAE-----------------VAA----SKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIG-VG 189 (221)
T ss_dssp ----CCTTT-----------------SSS----CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEE-ES
T ss_pred ----ecccc-----------------CCC----CCCChHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEE-EC
Confidence 00000 000 00011122456777777788999999999999999999999999 78
Q ss_pred chHHHHhhccccccchhcch
Q 003364 773 EGLQAARAADYSIGKFRFLK 792 (826)
Q Consensus 773 ~~~~~~~~Ad~v~~~~~~l~ 792 (826)
+.++++ .||+++.+++.+.
T Consensus 190 ~~~~~~-~a~~v~~~~~el~ 208 (221)
T 2wf7_A 190 RPEDLG-DDIVIVPDTSHYT 208 (221)
T ss_dssp CHHHHC-SSSEEESSGGGCC
T ss_pred CHHHhc-cccchhcCHHhCC
Confidence 887777 8999998887664
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.63 E-value=4.3e-08 Score=97.56 Aligned_cols=123 Identities=16% Similarity=0.114 Sum_probs=85.7
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.+++.+.++.+++.|++++++|+.+...+....+.+|+...... ++
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~--~~------------------------------ 136 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDI--II------------------------------ 136 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSE--EE------------------------------
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheee--ee------------------------------
Confidence 3468999999999999999999999998888888888886432110 00
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEec
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~ 770 (826)
... ... .-.|. --..+++.++...+++++|||+.||++|++.||++++|.
T Consensus 137 -----~~~----------------------~~~-~~k~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~ 188 (225)
T 3d6j_A 137 -----GGE----------------------DVT-HHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGV 188 (225)
T ss_dssp -----CGG----------------------GCS-SCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred -----ehh----------------------hcC-CCCCChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEE
Confidence 000 000 00111 123566777777789999999999999999999998773
Q ss_pred C---CchHHHHhh-ccccccchhcchhhe
Q 003364 771 G---REGLQAARA-ADYSIGKFRFLKRLI 795 (826)
Q Consensus 771 g---n~~~~~~~~-Ad~v~~~~~~l~~l~ 795 (826)
+ ++..++++. ||+++.+++.+..++
T Consensus 189 ~~~~~~~~~l~~~~ad~v~~~~~el~~~l 217 (225)
T 3d6j_A 189 TSGMTTAQEFQAYPYDRIISTLGQLISVP 217 (225)
T ss_dssp TTSSCCTTGGGGSCCSEEESSGGGGC---
T ss_pred CCCCCChHHHhhcCCCEEECCHHHHHHhh
Confidence 2 344555664 999999988887644
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.63 E-value=4.1e-08 Score=98.47 Aligned_cols=123 Identities=17% Similarity=0.078 Sum_probs=90.6
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.+++.+.++.|++.|++++++|+.....+....+.+|+....+. ++
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~------------------------------ 138 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKIN--IV------------------------------ 138 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSC--EE------------------------------
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhhe--ee------------------------------
Confidence 5679999999999999999999999999999999998887443211 00
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCc---cE
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI---GV 767 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v---gI 767 (826)
.+ ..+. .-.|. --..+++.++...+++++|||+.||++|.+.||+ +|
T Consensus 139 -----~~----------------------~~~~-~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v 190 (233)
T 3s6j_A 139 -----TR----------------------DDVS-YGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGL 190 (233)
T ss_dssp -----CG----------------------GGSS-CCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEE
T ss_pred -----cc----------------------ccCC-CCCCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEE
Confidence 00 0000 00111 1235666677677899999999999999999999 66
Q ss_pred EecCCchHHHHhh-ccccccchhcchhhe
Q 003364 768 GISGREGLQAARA-ADYSIGKFRFLKRLI 795 (826)
Q Consensus 768 am~gn~~~~~~~~-Ad~v~~~~~~l~~l~ 795 (826)
+++.++..++++. ||+++.++..|..++
T Consensus 191 ~~g~~~~~~l~~~~ad~v~~~~~el~~~l 219 (233)
T 3s6j_A 191 LSGGYDIGELERAGALRVYEDPLDLLNHL 219 (233)
T ss_dssp GGGSCCHHHHHHTTCSEEESSHHHHHHTG
T ss_pred eCCCCchHhHHhcCCCEEECCHHHHHHHH
Confidence 6633667777774 999999998888754
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.62 E-value=5.2e-08 Score=98.37 Aligned_cols=119 Identities=17% Similarity=0.191 Sum_probs=89.2
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
-++.|++.++++.|++.|++++++|+.+...+....+.+|+...-+
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 154 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFK---------------------------------- 154 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEE----------------------------------
Confidence 3578999999999999999999999999999999999988733211
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHH----HHHHHhhcC-CCeEEEEcCCcccHHhHHhCC
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKA----QLVELLKSC-DYRTLAIGDGGNDVRMIQKAD 764 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~----~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~ 764 (826)
..+..+..+. .|. .+++.++.. .+++++|||+.||++|.+.||
T Consensus 155 ------------------------------~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG 204 (240)
T 3sd7_A 155 ------------------------------YIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIG 204 (240)
T ss_dssp ------------------------------EEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHT
T ss_pred ------------------------------EEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCC
Confidence 1122222222 233 466666767 889999999999999999999
Q ss_pred c---cEEecCCch-HHH-Hhhccccccchhcchhhe
Q 003364 765 I---GVGISGREG-LQA-ARAADYSIGKFRFLKRLI 795 (826)
Q Consensus 765 v---gIam~gn~~-~~~-~~~Ad~v~~~~~~l~~l~ 795 (826)
+ +|++ |++. .+. +..||+++.++..+..++
T Consensus 205 ~~~i~v~~-g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 205 IDSIGVLY-GYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp CEEEEESS-SSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred CCEEEEeC-CCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 8 6666 5443 333 358999999998887754
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.61 E-value=1.4e-07 Score=99.22 Aligned_cols=115 Identities=17% Similarity=0.250 Sum_probs=83.1
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+++|++++++||.....+..+++.+|+...-.. .+...
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~--~l~~~--------------------------- 229 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSN--TVEIR--------------------------- 229 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--CEEEE---------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEE--EEEee---------------------------
Confidence 4889999999999999999999999999999999999998321100 00000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEe-----CcccHHH----HHHHhhcCCCeEEEEcCCcccHHhHHhC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV-----TPSQKAQ----LVELLKSCDYRTLAIGDGGNDVRMIQKA 763 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~p~~K~~----iv~~l~~~~~~v~~iGDg~ND~~ml~~A 763 (826)
....-.++ .++.|.. +++.++...+++++|||+.||++|++.|
T Consensus 230 ----------------------------dg~~tg~i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~A 281 (317)
T 4eze_A 230 ----------------------------DNVLTDNITLPIMNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHA 281 (317)
T ss_dssp ----------------------------TTEEEEEECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred ----------------------------CCeeeeeEecccCCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHC
Confidence 00011111 1234544 4444455678899999999999999999
Q ss_pred CccEEecCCchHHHHhhcccccc
Q 003364 764 DIGVGISGREGLQAARAADYSIG 786 (826)
Q Consensus 764 ~vgIam~gn~~~~~~~~Ad~v~~ 786 (826)
|+|+++ + +.+.+++.|+.++.
T Consensus 282 G~~va~-~-~~~~~~~~a~~~i~ 302 (317)
T 4eze_A 282 GTGIAW-K-AKPVVREKIHHQIN 302 (317)
T ss_dssp SEEEEE-S-CCHHHHHHCCEEES
T ss_pred CCeEEe-C-CCHHHHHhcCeeeC
Confidence 999999 3 56677888888874
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.59 E-value=1.3e-07 Score=104.10 Aligned_cols=116 Identities=23% Similarity=0.292 Sum_probs=85.9
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.++.|+++|++++++||.....+..+++.+|+.....+ .+.
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~--~l~----------------------------- 304 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAAN--ELE----------------------------- 304 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEE--CEE-----------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeee--eEE-----------------------------
Confidence 7899999999999999999999999999999999999998321000 000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeC-----cccHHHHHH----HhhcCCCeEEEEcCCcccHHhHHhC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT-----PSQKAQLVE----LLKSCDYRTLAIGDGGNDVRMIQKA 763 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----p~~K~~iv~----~l~~~~~~v~~iGDg~ND~~ml~~A 763 (826)
+....+..++. ++.|..+++ .++...+++++|||+.||++|++.|
T Consensus 305 --------------------------~~dg~~tg~~~~~v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~a 358 (415)
T 3p96_A 305 --------------------------IVDGTLTGRVVGPIIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAA 358 (415)
T ss_dssp --------------------------EETTEEEEEECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred --------------------------EeCCEEEeeEccCCCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHC
Confidence 00011112211 334554444 4444568899999999999999999
Q ss_pred CccEEecCCchHHHHhhccccccc
Q 003364 764 DIGVGISGREGLQAARAADYSIGK 787 (826)
Q Consensus 764 ~vgIam~gn~~~~~~~~Ad~v~~~ 787 (826)
|+|+++ ++.+.+++.||+++..
T Consensus 359 G~~va~--~~~~~~~~~ad~~i~~ 380 (415)
T 3p96_A 359 GLGIAF--NAKPALREVADASLSH 380 (415)
T ss_dssp SEEEEE--SCCHHHHHHCSEEECS
T ss_pred CCeEEE--CCCHHHHHhCCEEEcc
Confidence 999999 5677888899999854
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.57 E-value=5.6e-08 Score=95.15 Aligned_cols=118 Identities=18% Similarity=0.162 Sum_probs=83.3
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.+++.+.++.+++.|++++++|+.+..... ..+.+|+.....
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~----------------------------------- 128 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFT----------------------------------- 128 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEE-----------------------------------
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhee-----------------------------------
Confidence 46799999999999999999999999887777 777776521100
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc-EEecC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VGISG 771 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg-Iam~g 771 (826)
.++.... .. ...-.|.--..+++.++...+++++|||+.||++|++.||++ |+| +
T Consensus 129 --~~~~~~~-----------------~~----~~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~-~ 184 (207)
T 2go7_A 129 --EILTSQS-----------------GF----VRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINF-L 184 (207)
T ss_dssp --EEECGGG-----------------CC----CCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEES-S
T ss_pred --eEEecCc-----------------CC----CCCCCcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEE-e
Confidence 0000000 00 000011122467777777788999999999999999999997 777 7
Q ss_pred CchHHHHhhccccccchhcchhh
Q 003364 772 REGLQAARAADYSIGKFRFLKRL 794 (826)
Q Consensus 772 n~~~~~~~~Ad~v~~~~~~l~~l 794 (826)
++. . .||+++.++..+..+
T Consensus 185 ~~~-~---~a~~v~~~~~el~~~ 203 (207)
T 2go7_A 185 EST-Y---EGNHRIQALADISRI 203 (207)
T ss_dssp CCS-C---TTEEECSSTTHHHHH
T ss_pred cCC-C---CCCEEeCCHHHHHHH
Confidence 765 3 699999888877664
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.54 E-value=7.5e-08 Score=98.99 Aligned_cols=123 Identities=20% Similarity=0.234 Sum_probs=85.5
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCC-CCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE-PKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
.+.+++.+.++.|++.|+++.++|+.+...+..+.+.+|+.... +. ++
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~--~~----------------------------- 151 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDF--LV----------------------------- 151 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSC--CB-----------------------------
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHh--ee-----------------------------
Confidence 46789999999999999999999999988887777776653221 10 00
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEE-EeCcccHHHHHHHhhcCC-CeEEEEcCCcccHHhHHhCC---cc
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICC-RVTPSQKAQLVELLKSCD-YRTLAIGDGGNDVRMIQKAD---IG 766 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~p~~K~~iv~~l~~~~-~~v~~iGDg~ND~~ml~~A~---vg 766 (826)
....+.. .-.|.--..+++.++... +++++|||+.||++|++.|| ++
T Consensus 152 ----------------------------~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~ 203 (267)
T 1swv_A 152 ----------------------------TPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVG 203 (267)
T ss_dssp ----------------------------CGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEE
T ss_pred ----------------------------cCCccCCCCCCHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEE
Confidence 0000000 001112245677777777 89999999999999999999 56
Q ss_pred EEecCCc------------------------hHHHHhh-ccccccchhcchhhe
Q 003364 767 VGISGRE------------------------GLQAARA-ADYSIGKFRFLKRLI 795 (826)
Q Consensus 767 Iam~gn~------------------------~~~~~~~-Ad~v~~~~~~l~~l~ 795 (826)
|++ |++ .+++++. ||+++.++..|..++
T Consensus 204 v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~~~~el~~~l 256 (267)
T 1swv_A 204 VIL-GSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVM 256 (267)
T ss_dssp ECT-TCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHH
T ss_pred EcC-CCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCceeccCHHHHHHHH
Confidence 666 554 3456664 999999988887643
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.54 E-value=1.4e-07 Score=92.99 Aligned_cols=122 Identities=14% Similarity=0.069 Sum_probs=88.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.+++.+.++.|++.|++++++|+.+...+....+.+|+...-+. ++.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~----------------------------- 137 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDI--VLS----------------------------- 137 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEE-----------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheee--Eee-----------------------------
Confidence 5689999999999999999999999999999999999987432110 000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEec
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~ 770 (826)
+. .+ ..-.|. --..+++.++...+++++|||+.||++|.+.||++++|.
T Consensus 138 ------~~----------------------~~-~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~ 188 (214)
T 3e58_A 138 ------GE----------------------EF-KESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAI 188 (214)
T ss_dssp ------GG----------------------GC-SSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEE
T ss_pred ------cc----------------------cc-cCCCCChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEE
Confidence 00 00 000111 124577777777889999999999999999999998883
Q ss_pred CCc-hHHHHhhccccccchhcchhh
Q 003364 771 GRE-GLQAARAADYSIGKFRFLKRL 794 (826)
Q Consensus 771 gn~-~~~~~~~Ad~v~~~~~~l~~l 794 (826)
.+. ....+..||+++.++..+..+
T Consensus 189 ~~~~~~~~~~~a~~~~~~~~el~~~ 213 (214)
T 3e58_A 189 RDNEFGMDQSAAKGLLDSLTDVLDL 213 (214)
T ss_dssp CCSSSCCCCTTSSEEESSGGGGGGG
T ss_pred CCCCccchhccHHHHHHHHHHHHhh
Confidence 332 222235899999998887664
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.50 E-value=1.2e-07 Score=94.85 Aligned_cols=120 Identities=13% Similarity=0.051 Sum_probs=89.6
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
-++.+++.++++.|++.|++++++|+.+...+....+.+|+...-+
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 140 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFD---------------------------------- 140 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcc----------------------------------
Confidence 3578999999999999999999999999988888888888732211
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCccc------HHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCc
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQ------KAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI 765 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~------K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v 765 (826)
..+..+..+.. -..+++.++...+++++|||+.||++|.+.||+
T Consensus 141 ------------------------------~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~ 190 (230)
T 3um9_A 141 ------------------------------HLISVDEVRLFKPHQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGY 190 (230)
T ss_dssp ------------------------------EEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTC
T ss_pred ------------------------------eeEehhhcccCCCChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCC
Confidence 00111111111 235667777778899999999999999999999
Q ss_pred cEEec---CCchHHHHhhccccccchhcchhhe
Q 003364 766 GVGIS---GREGLQAARAADYSIGKFRFLKRLI 795 (826)
Q Consensus 766 gIam~---gn~~~~~~~~Ad~v~~~~~~l~~l~ 795 (826)
+++|. +++.+..+..||+++.++..|..++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 223 (230)
T 3um9_A 191 PVCWINRSNGVFDQLGVVPDIVVSDVGVLASRF 223 (230)
T ss_dssp CEEEECTTSCCCCCSSCCCSEEESSHHHHHHTC
T ss_pred EEEEEeCCCCccccccCCCcEEeCCHHHHHHHH
Confidence 99882 2333445568999999998887754
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.50 E-value=1.1e-07 Score=91.19 Aligned_cols=61 Identities=13% Similarity=0.055 Sum_probs=47.7
Q ss_pred HHHHHHhhcCCCeEEEEcCCcccHHhHHhCCc---cEEecCCchHHHH----hhccccccchhcchhhe
Q 003364 734 AQLVELLKSCDYRTLAIGDGGNDVRMIQKADI---GVGISGREGLQAA----RAADYSIGKFRFLKRLI 795 (826)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v---gIam~gn~~~~~~----~~Ad~v~~~~~~l~~l~ 795 (826)
..+++.++...+++++|||+.||+.|.+.||+ +|++ |+...+.. ..||+++.++..+..++
T Consensus 108 ~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~-g~~~~~~~~~~~~~~d~v~~~l~el~~~l 175 (179)
T 3l8h_A 108 RDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQT-GNGRKTLAQGGLPEGTRVCEDLAAVAEQL 175 (179)
T ss_dssp HHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEEST-TTHHHHHHHCCCCTTEEEESSHHHHHHHH
T ss_pred HHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECC-CCcchhhhhcccCCCcEEecCHHHHHHHH
Confidence 35677777778999999999999999999995 5555 66555444 35799999988887754
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.48 E-value=1.7e-07 Score=96.65 Aligned_cols=119 Identities=16% Similarity=0.131 Sum_probs=87.0
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.+++.++++.|++.|++++++|+.+...+....+.+|+...... .
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~--~------------------------------- 157 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPA--S------------------------------- 157 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCS--E-------------------------------
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCc--e-------------------------------
Confidence 5679999999999999999999999998888888887775332000 0
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--c----HHHHHHHhhcCC-CeEEEEcCCcccHHhHHhCCc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--Q----KAQLVELLKSCD-YRTLAIGDGGNDVRMIQKADI 765 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~----K~~iv~~l~~~~-~~v~~iGDg~ND~~ml~~A~v 765 (826)
.+..+..+. . -..+++.++... +++++|||+.||++|.+.||+
T Consensus 158 ------------------------------~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~ 207 (277)
T 3iru_A 158 ------------------------------TVFATDVVRGRPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGM 207 (277)
T ss_dssp ------------------------------EECGGGSSSCTTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTC
T ss_pred ------------------------------EecHHhcCCCCCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCC
Confidence 000000111 1 235777777778 899999999999999999994
Q ss_pred ---cEEecC------------------------CchHHHHh-hccccccchhcchhhe
Q 003364 766 ---GVGISG------------------------REGLQAAR-AADYSIGKFRFLKRLI 795 (826)
Q Consensus 766 ---gIam~g------------------------n~~~~~~~-~Ad~v~~~~~~l~~l~ 795 (826)
+|++ | ++.+++++ .||+++.++..|..++
T Consensus 208 ~~v~v~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l 264 (277)
T 3iru_A 208 WTVGVSC-SGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVIDSVADLETVI 264 (277)
T ss_dssp EEEEECS-SSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEESSGGGTHHHH
T ss_pred eEEEEec-CCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEecCHHHHHHHH
Confidence 5666 4 23456666 5999999998887753
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.46 E-value=6.4e-07 Score=87.94 Aligned_cols=122 Identities=23% Similarity=0.267 Sum_probs=89.3
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.++.|+++ ++++++|+.+...+..+++.+|+...-.. .+...
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~--~~~~~--------------------------- 118 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCH--KLEID--------------------------- 118 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEE--EEEEC---------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecc--eeEEc---------------------------
Confidence 5789999999999999 99999999999999999999997421100 00000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEE--EeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEec
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICC--RVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~ 770 (826)
....... .-.|..|..+++.++..++++++|||+.||++|.+.||+++++
T Consensus 119 ---------------------------~~~~~~~~~~p~p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~- 170 (206)
T 1rku_A 119 ---------------------------DSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF- 170 (206)
T ss_dssp ---------------------------TTSCEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-
T ss_pred ---------------------------CCceEEeeecCCCchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEE-
Confidence 0011111 1356679999999988889999999999999999999999998
Q ss_pred CCchHHHHhhc-ccc-ccchhcchh
Q 003364 771 GREGLQAARAA-DYS-IGKFRFLKR 793 (826)
Q Consensus 771 gn~~~~~~~~A-d~v-~~~~~~l~~ 793 (826)
. +..++++.+ +++ ..+...+..
T Consensus 171 ~-~~~~~~~~~~~~~~~~~~~~l~~ 194 (206)
T 1rku_A 171 H-APENVIREFPQFPAVHTYEDLKR 194 (206)
T ss_dssp S-CCHHHHHHCTTSCEECSHHHHHH
T ss_pred C-CcHHHHHHHhhhccccchHHHHH
Confidence 4 345566644 554 566665544
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=2.3e-07 Score=96.23 Aligned_cols=122 Identities=14% Similarity=0.098 Sum_probs=87.5
Q ss_pred ccCCchHHHHHHHHHcCC--eEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCC
Q 003364 613 RLQDGVPETIETLRKAGI--NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi--~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (826)
++.|++.++++.|++.|+ +++++|+.....+....+.+|+...-+. ++..+.
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~--v~~~~~------------------------ 195 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDG--LTYCDY------------------------ 195 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSE--EECCCC------------------------
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccce--EEEecc------------------------
Confidence 567899999999999999 9999999999999999888887433211 000000
Q ss_pred CceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEE-eCcccHH----HHHHHhhcCC-CeEEEEcCCcccHHhHHhCC
Q 003364 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-VTPSQKA----QLVELLKSCD-YRTLAIGDGGNDVRMIQKAD 764 (826)
Q Consensus 691 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~p~~K~----~iv~~l~~~~-~~v~~iGDg~ND~~ml~~A~ 764 (826)
.... ..++.|. .+++.++... +++++|||+.||+.|.+.||
T Consensus 196 ---------------------------------~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG 242 (282)
T 3nuq_A 196 ---------------------------------SRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLG 242 (282)
T ss_dssp ---------------------------------SSCSSCCCTTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHT
T ss_pred ---------------------------------CCCcccCCCcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCC
Confidence 0000 0112233 4666666677 89999999999999999999
Q ss_pred ccEEecCCchHHHH------hhccccccchhcchhh
Q 003364 765 IGVGISGREGLQAA------RAADYSIGKFRFLKRL 794 (826)
Q Consensus 765 vgIam~gn~~~~~~------~~Ad~v~~~~~~l~~l 794 (826)
+|++| +++....+ ..||+++.++..|..+
T Consensus 243 ~~~~~-~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 243 MKTCI-HLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp CSEEE-EECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred CeEEE-EEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 99988 55444322 2789999998888764
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.43 E-value=5.1e-07 Score=90.39 Aligned_cols=114 Identities=17% Similarity=0.160 Sum_probs=82.8
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.+++.+.++.|+++|++++++|+.+...+....+.+|+....+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~----------------------------------- 147 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFD----------------------------------- 147 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhee-----------------------------------
Confidence 578999999999999999999999999999999999988732211
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccH------HHHHHHhhcCCC-eEEEEcCCcccHHhHHhCCc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK------AQLVELLKSCDY-RTLAIGDGGNDVRMIQKADI 765 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K------~~iv~~l~~~~~-~v~~iGDg~ND~~ml~~A~v 765 (826)
..+..+-.+..| ..+++.++...+ ++++|||+.||++|.+.||+
T Consensus 148 -----------------------------~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~ 198 (231)
T 3kzx_A 148 -----------------------------SIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGC 198 (231)
T ss_dssp -----------------------------EEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTC
T ss_pred -----------------------------eEEcccccCCCCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCC
Confidence 111111111122 457777777777 89999999999999999997
Q ss_pred -cEEecCCchHHHHhhccccccchhcchhh
Q 003364 766 -GVGISGREGLQAARAADYSIGKFRFLKRL 794 (826)
Q Consensus 766 -gIam~gn~~~~~~~~Ad~v~~~~~~l~~l 794 (826)
+|+| +++.. ..+++++.++..|..+
T Consensus 199 ~~v~~-~~~~~---~~~~~~~~~~~el~~~ 224 (231)
T 3kzx_A 199 LPIKY-GSTNI---IKDILSFKNFYDIRNF 224 (231)
T ss_dssp EEEEE-CC--------CCEEESSHHHHHHH
T ss_pred eEEEE-CCCCC---CCCceeeCCHHHHHHH
Confidence 5566 66543 3678888888777664
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.43 E-value=2.3e-07 Score=92.98 Aligned_cols=118 Identities=16% Similarity=0.138 Sum_probs=83.4
Q ss_pred ccCCchHHHHHHHHHc-CCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 613 RLQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~-Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
.+.|++.+.++.|++. |+++.++|+.+...+....+.+|+...-.. ++
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~----------------------------- 141 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPF--GA----------------------------- 141 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSC--EE-----------------------------
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCc--ce-----------------------------
Confidence 4679999999999999 999999999999888888888887432211 00
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCccc--H----HHHHHHhh--cCCCeEEEEcCCcccHHhHHhC
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQ--K----AQLVELLK--SCDYRTLAIGDGGNDVRMIQKA 763 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~--K----~~iv~~l~--~~~~~v~~iGDg~ND~~ml~~A 763 (826)
.+. +..+.. + ..+++.++ ...+++++|||+.||++|.+.|
T Consensus 142 ------~~~--------------------------~~~~~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~a 189 (234)
T 2hcf_A 142 ------FAD--------------------------DALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCAREL 189 (234)
T ss_dssp ------CTT--------------------------TCSSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTT
T ss_pred ------ecC--------------------------CCcCccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHC
Confidence 000 001111 1 24566666 5678999999999999999999
Q ss_pred Ccc---EEecCCchHHHH-h-hccccccchhcchhh
Q 003364 764 DIG---VGISGREGLQAA-R-AADYSIGKFRFLKRL 794 (826)
Q Consensus 764 ~vg---Iam~gn~~~~~~-~-~Ad~v~~~~~~l~~l 794 (826)
|++ |++ ++...+.. . .||+++.++..+..+
T Consensus 190 G~~~i~v~~-~~~~~~~~~~~~a~~v~~~~~el~~~ 224 (234)
T 2hcf_A 190 DARSIAVAT-GNFTMEELARHKPGTLFKNFAETDEV 224 (234)
T ss_dssp TCEEEEECC-SSSCHHHHHTTCCSEEESCSCCHHHH
T ss_pred CCcEEEEcC-CCCCHHHHHhCCCCEEeCCHHhHHHH
Confidence 955 444 44433333 3 389999988887664
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.42 E-value=1.5e-07 Score=94.26 Aligned_cols=124 Identities=13% Similarity=0.022 Sum_probs=91.1
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
-++.|++.++++.|++.|++++++|+.+...+....+.+|+....+. ++..+.
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~~------------------------- 150 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDH--VLSVDA------------------------- 150 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSE--EEEGGG-------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCE--EEEecc-------------------------
Confidence 35679999999999999999999999999999888888887432211 000000
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
.. .-.|. --..+++.++...+++++|||+.||+.|.+.||++++|
T Consensus 151 ---------------------------~~------~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~ 197 (233)
T 3umb_A 151 ---------------------------VR------LYKTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFW 197 (233)
T ss_dssp ---------------------------TT------CCTTSHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred ---------------------------cC------CCCcCHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEE
Confidence 00 00111 12356677777788999999999999999999999988
Q ss_pred c---CCchHHHHhhccccccchhcchhhe
Q 003364 770 S---GREGLQAARAADYSIGKFRFLKRLI 795 (826)
Q Consensus 770 ~---gn~~~~~~~~Ad~v~~~~~~l~~l~ 795 (826)
. +++.++++..||+++.++..|..++
T Consensus 198 v~~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 198 INRLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp ECTTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred EcCCCCCchhccCCCCEEECCHHHHHHHH
Confidence 2 4445555668999999998887754
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.41 E-value=1.3e-07 Score=93.25 Aligned_cols=116 Identities=20% Similarity=0.255 Sum_probs=85.0
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.++.|+++ ++++++|+.+...+....+.+|+...-+
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~----------------------------------- 126 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMA----------------------------------- 126 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEE-----------------------------------
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhcc-----------------------------------
Confidence 5689999999999999 9999999999888888888887622100
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccH------HHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK------AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K------~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
.++. .+-....| ..+++.++...+++++|||+.||++|.+.||++
T Consensus 127 --~~~~---------------------------~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~ 177 (209)
T 2hdo_A 127 --VTIS---------------------------ADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVD 177 (209)
T ss_dssp --EEEC---------------------------GGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCE
T ss_pred --EEEe---------------------------cCcCCCCCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCe
Confidence 0000 00011123 456777777788999999999999999999999
Q ss_pred EEec--CC-chHHHHhhccccccchhcchhh
Q 003364 767 VGIS--GR-EGLQAARAADYSIGKFRFLKRL 794 (826)
Q Consensus 767 Iam~--gn-~~~~~~~~Ad~v~~~~~~l~~l 794 (826)
++|. |+ +.++++. ||+++.++..+..+
T Consensus 178 ~~~~~~~~~~~~~~~~-a~~~~~~~~el~~~ 207 (209)
T 2hdo_A 178 FGLAVWGMDPNADHQK-VAHRFQKPLDILEL 207 (209)
T ss_dssp EEEEGGGCCTTGGGSC-CSEEESSGGGGGGG
T ss_pred EEEEcCCCCChhhhcc-CCEEeCCHHHHHHh
Confidence 9882 22 3444555 99999888877653
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.41 E-value=3.2e-07 Score=91.97 Aligned_cols=120 Identities=13% Similarity=0.088 Sum_probs=88.1
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.|++.++++.|++. ++++++|+.+...+....+.+|+...-+. ++
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~--~~------------------------------ 146 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDS--IT------------------------------ 146 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSE--EE------------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcce--eE------------------------------
Confidence 4679999999999999 99999999999888888888887322110 00
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhcCCCeEEEEcCCc-ccHHhHHhCC---cc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKAD---IG 766 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~---vg 766 (826)
.+.. .. .-.|. --..+++.++...+++++|||+. ||++|.+.|| ++
T Consensus 147 -----~~~~-----------------~~------~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~ 198 (234)
T 3u26_A 147 -----TSEE-----------------AG------FFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSIL 198 (234)
T ss_dssp -----EHHH-----------------HT------BCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEE
T ss_pred -----eccc-----------------cC------CCCcCHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEE
Confidence 0000 00 00111 12356777777788999999997 9999999999 56
Q ss_pred EEecCCchHHHHhhccccccchhcchhh
Q 003364 767 VGISGREGLQAARAADYSIGKFRFLKRL 794 (826)
Q Consensus 767 Iam~gn~~~~~~~~Ad~v~~~~~~l~~l 794 (826)
|++ +++..+.+..||+++.++..+..+
T Consensus 199 v~~-~~~~~~~~~~a~~~~~~~~el~~~ 225 (234)
T 3u26_A 199 LDR-KGEKREFWDKCDFIVSDLREVIKI 225 (234)
T ss_dssp ECS-SSTTGGGGGGCSEEESSTHHHHHH
T ss_pred ECC-CCCccccccCCCEeeCCHHHHHHH
Confidence 676 777777777999999998887764
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.39 E-value=2.9e-07 Score=92.20 Aligned_cols=122 Identities=11% Similarity=0.105 Sum_probs=85.1
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCC---hhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDK---QNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE 689 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~---~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (826)
.+.+++.+.++.|++.|++++++|+.. ...+....+.+|+...-+. ++
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~--~~--------------------------- 149 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDK--TF--------------------------- 149 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSE--EE---------------------------
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhh--he---------------------------
Confidence 357999999999999999999999998 7777788888886322110 00
Q ss_pred CCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCc--ccHHHHHHHhhcCCCeEEEEcCCc-ccHHhHHhCCcc
Q 003364 690 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIG 766 (826)
Q Consensus 690 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p--~~K~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~vg 766 (826)
.+.. . . ...| .--..+++.++...+++++|||+. ||++|.+.||++
T Consensus 150 --------~~~~--------------~---~------~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~ 198 (235)
T 2om6_A 150 --------FADE--------------V---L------SYKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMW 198 (235)
T ss_dssp --------EHHH--------------H---T------CCTTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSE
T ss_pred --------eccc--------------c---C------CCCCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCE
Confidence 0000 0 0 0011 112356677777788999999999 999999999999
Q ss_pred EEec--CCchHHHHhhccccccchhcchhh
Q 003364 767 VGIS--GREGLQAARAADYSIGKFRFLKRL 794 (826)
Q Consensus 767 Iam~--gn~~~~~~~~Ad~v~~~~~~l~~l 794 (826)
++|. +++..+.+..+|+++.++..+..+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 228 (235)
T 2om6_A 199 AVWINQEGDKVRKLEERGFEIPSIANLKDV 228 (235)
T ss_dssp EEEECTTCCSCEEEETTEEEESSGGGHHHH
T ss_pred EEEECCCCCCcccCCCCcchHhhHHHHHHH
Confidence 9982 233333445688888888777553
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.39 E-value=1.2e-06 Score=87.79 Aligned_cols=110 Identities=13% Similarity=0.006 Sum_probs=76.1
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.|++.+.++.|+++|++++++||.+...+..+++.+|+...-.. .+..
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~--~~~~---------------------------- 141 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIAT--DPEY---------------------------- 141 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEEC--EEEE----------------------------
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEc--ceEE----------------------------
Confidence 5789999999999999999999999999999999999998311000 0000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEe-----CcccHHHHHHH----hh---cCCCeEEEEcCCcccHHhH
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV-----TPSQKAQLVEL----LK---SCDYRTLAIGDGGNDVRMI 760 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~p~~K~~iv~~----l~---~~~~~v~~iGDg~ND~~ml 760 (826)
.......+. ....|...++. ++ ...++++++||+.||++|+
T Consensus 142 ---------------------------~~~~~~g~~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~ 194 (232)
T 3fvv_A 142 ---------------------------RDGRYTGRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLL 194 (232)
T ss_dssp ---------------------------ETTEEEEEEESSCSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHH
T ss_pred ---------------------------ECCEEeeeecCCCCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHH
Confidence 000111111 12346544433 33 4457899999999999999
Q ss_pred HhCCccEEecCCchHHHHhhc
Q 003364 761 QKADIGVGISGREGLQAARAA 781 (826)
Q Consensus 761 ~~A~vgIam~gn~~~~~~~~A 781 (826)
+.||+++++ +..+.+++.|
T Consensus 195 ~~ag~~~~~--~~~~~l~~~a 213 (232)
T 3fvv_A 195 EAVTRPIAA--NPSPGLREIA 213 (232)
T ss_dssp HHSSEEEEE--SCCHHHHHHH
T ss_pred HhCCCeEEE--CcCHHHHHHH
Confidence 999999999 3344455543
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.37 E-value=4e-07 Score=92.11 Aligned_cols=121 Identities=19% Similarity=0.155 Sum_probs=85.4
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+++|++++++|+.+...+..+.+.+|+...-. .+
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~---~~------------------------------ 160 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFS---EM------------------------------ 160 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS---EE------------------------------
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEE---EE------------------------------
Confidence 577999999999999999999999999998999999998732211 00
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCc--ccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEec
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~ 770 (826)
+.+.. .....| .--..+++.++...+++++|||+.||++|.+.||+++++.
T Consensus 161 ----~~~~~-----------------------~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v 213 (243)
T 2hsz_A 161 ----LGGQS-----------------------LPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGL 213 (243)
T ss_dssp ----ECTTT-----------------------SSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred ----Eeccc-----------------------CCCCCcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEE
Confidence 00000 000112 2234567777777889999999999999999999985431
Q ss_pred CCc----hHHHHhhccccccchhcchh
Q 003364 771 GRE----GLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 771 gn~----~~~~~~~Ad~v~~~~~~l~~ 793 (826)
..+ .+..+..||+++.++..|..
T Consensus 214 ~~g~~~~~~~~~~~ad~vi~~~~el~~ 240 (243)
T 2hsz_A 214 TYGYNYNIPIAQSKPDWIFDDFADILK 240 (243)
T ss_dssp SSSCSTTCCGGGGCCSEEESSGGGGGG
T ss_pred cCCCCchhhhhhCCCCEEECCHHHHHH
Confidence 321 22234578999988877755
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=2.6e-06 Score=78.24 Aligned_cols=141 Identities=16% Similarity=0.202 Sum_probs=88.7
Q ss_pred CCcccccceeeEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHH
Q 003364 382 KTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEA 461 (826)
Q Consensus 382 KTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~a 461 (826)
..||+|-|++++..+...+. -+..+++...+.+. ..+.+|..+|
T Consensus 13 ~~~tit~gnr~vt~v~~~~g-----------------------~~e~elL~lAAs~E-------------~~SeHPla~A 56 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQG-----------------------VDEKTLADAAQLAS-------------LADETPEGRS 56 (156)
T ss_dssp --------CEEEEEEEECTT-----------------------SCHHHHHHHHHHTT-------------SSCCSHHHHH
T ss_pred CCCceecCCCeEEEEEecCC-----------------------CCHHHHHHHHHHHh-------------CcCCCHHHHH
Confidence 46999999999999864221 01123343333332 1257999999
Q ss_pred HHHHHHhC-CeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcC--C
Q 003364 462 LVHAAAQL-HMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG--Q 538 (826)
Q Consensus 462 ll~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~--~ 538 (826)
++++|++. ++....... . .....+|++..++..|.+ +| .-+.+|+++.|..++... .
T Consensus 57 Iv~~A~~~~~l~~~~~~~-----------~---~~~~~~F~a~~G~~Gv~v----~G--~~v~vGn~~~i~~l~~~~gi~ 116 (156)
T 1svj_A 57 IVILAKQRFNLRERDVQS-----------L---HATFVPFTAQSRMSGINI----DN--RMIRKGSVDAIRRHVEANGGH 116 (156)
T ss_dssp HHHHHHHHTTCCCCCHHH-----------H---TCEEEEEETTTTEEEEEE----TT--EEEEEEEHHHHHHHHHHHTCC
T ss_pred HHHHHHHhcCCCcccccc-----------c---ccceeeccccCCCCeEEE----CC--EEEEEeCcHHHHHHHHHcCCC
Confidence 99999876 543210000 0 011357877777666643 34 357789998877776532 2
Q ss_pred ChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCC
Q 003364 539 QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQD 616 (826)
Q Consensus 539 ~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~ 616 (826)
.+..+.+.+++++.+|.+++++| .|..++|+|++.|++||
T Consensus 117 ~~~~~~~~~~~la~~G~T~v~VA--------------------------------------~d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 117 FPTDVDQKVDQVARQGATPLVVV--------------------------------------EGSRVLGVIALKDIVKG 156 (156)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEE--------------------------------------ETTEEEEEEEEEECCCC
T ss_pred CcHHHHHHHHHHHhCCCCEEEEE--------------------------------------ECCEEEEEEEEecCCCC
Confidence 34468888999999999999999 58899999999999986
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.35 E-value=1.3e-07 Score=96.02 Aligned_cols=118 Identities=17% Similarity=0.125 Sum_probs=80.9
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHH-cCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS-CNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
.+.+++.++++.|++.|++++++|+.....+.....+ .|+....+
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~---------------------------------- 157 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFS---------------------------------- 157 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSS----------------------------------
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhhee----------------------------------
Confidence 5789999999999999999999999987655443322 23211100
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEE--eCccc--H----HHHHHHhhcCC--CeEEEEcCCcccHHhHH
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCR--VTPSQ--K----AQLVELLKSCD--YRTLAIGDGGNDVRMIQ 761 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~p~~--K----~~iv~~l~~~~--~~v~~iGDg~ND~~ml~ 761 (826)
..+..+ ..+.. | ..+++.++... +++++|||+.||++|.+
T Consensus 158 ------------------------------~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~ 207 (250)
T 3l5k_A 158 ------------------------------HIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAAL 207 (250)
T ss_dssp ------------------------------CEECTTCTTCCSCTTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHH
T ss_pred ------------------------------eEEecchhhccCCCCChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHH
Confidence 000001 01111 2 34555555555 89999999999999999
Q ss_pred hCCc---cEEecCCchHHHHhhccccccchhcchhhe
Q 003364 762 KADI---GVGISGREGLQAARAADYSIGKFRFLKRLI 795 (826)
Q Consensus 762 ~A~v---gIam~gn~~~~~~~~Ad~v~~~~~~l~~l~ 795 (826)
.||+ +|++ +++..+.+..||+++.++..|...+
T Consensus 208 ~aG~~~i~v~~-~~~~~~~~~~ad~v~~sl~el~~~l 243 (250)
T 3l5k_A 208 AAGMQVVMVPD-GNLSRDLTTKATLVLNSLQDFQPEL 243 (250)
T ss_dssp HTTCEEEECCC-TTSCGGGSTTSSEECSCGGGCCGGG
T ss_pred HcCCEEEEEcC-CCCchhhcccccEeecCHHHhhHHH
Confidence 9994 5555 6666667779999999998886543
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.34 E-value=4.9e-07 Score=92.35 Aligned_cols=121 Identities=14% Similarity=0.002 Sum_probs=87.5
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
-.+.+++.++++.|++.|++++++|+.....+....+.+|+...
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~------------------------------------ 152 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTEL------------------------------------ 152 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHH------------------------------------
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhh------------------------------------
Confidence 35679999999999999999999999999999989888886210
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCc-cc------HHHHHHHhhcCCCeEEEEcCCcccHHhHHhCC
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP-SQ------KAQLVELLKSCDYRTLAIGDGGNDVRMIQKAD 764 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p-~~------K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ 764 (826)
|.. ..+..+..+ .. -..+++.++...+++++|||+.||++|.+.||
T Consensus 153 ---------------------f~~------~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG 205 (259)
T 4eek_A 153 ---------------------AGE------HIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAG 205 (259)
T ss_dssp ---------------------HCS------CEECGGGGTTCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHT
T ss_pred ---------------------ccc------eEEeHhhcCcCCCCChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCC
Confidence 000 000001111 11 24567777777889999999999999999999
Q ss_pred ccEEecCCc-------hHHHHh-hccccccchhcchhhe
Q 003364 765 IGVGISGRE-------GLQAAR-AADYSIGKFRFLKRLI 795 (826)
Q Consensus 765 vgIam~gn~-------~~~~~~-~Ad~v~~~~~~l~~l~ 795 (826)
++..+..++ .++.++ .||+++.++..|..++
T Consensus 206 ~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l 244 (259)
T 4eek_A 206 ATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAAL 244 (259)
T ss_dssp CEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHH
T ss_pred CEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHH
Confidence 984432332 344555 5999999998887754
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.34 E-value=6.2e-07 Score=88.42 Aligned_cols=115 Identities=17% Similarity=0.122 Sum_probs=84.8
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.++.|++ |+++.++|+.+...+....+.+|+....+
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~----------------------------------- 127 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFD----------------------------------- 127 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhee-----------------------------------
Confidence 467999999999999 99999999999888888888888732211
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHH----HHHHHhhcCCCeEEEEcCCcccHHhHHhCCc---
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKA----QLVELLKSCDYRTLAIGDGGNDVRMIQKADI--- 765 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~----~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v--- 765 (826)
..+..+-.++.|. .+++.++..++++++|||+.||+.|.+.||+
T Consensus 128 -----------------------------~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i 178 (210)
T 2ah5_A 128 -----------------------------GIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKL 178 (210)
T ss_dssp -----------------------------EEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred -----------------------------eeecCCCCCCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEE
Confidence 1222231122343 3555666667899999999999999999998
Q ss_pred cEEecCCc-hHHHHh-hccccccchhcchh
Q 003364 766 GVGISGRE-GLQAAR-AADYSIGKFRFLKR 793 (826)
Q Consensus 766 gIam~gn~-~~~~~~-~Ad~v~~~~~~l~~ 793 (826)
+|++ |++ .++++. .||+++.++..+..
T Consensus 179 ~v~~-~~~~~~~l~~~~a~~v~~~~~el~~ 207 (210)
T 2ah5_A 179 AITW-GFGEQADLLNYQPDYIAHKPLEVLA 207 (210)
T ss_dssp EESS-SSSCHHHHHTTCCSEEESSTTHHHH
T ss_pred EEcC-CCCCHHHHHhCCCCEEECCHHHHHH
Confidence 6666 554 455554 68999988777654
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.34 E-value=4.4e-07 Score=93.23 Aligned_cols=59 Identities=17% Similarity=0.149 Sum_probs=43.3
Q ss_pred HHHHHhhcCCCeEEEEcCC-cccHHhHHhCCccEEec--CC-chHHHHh---hccccccchhcchh
Q 003364 735 QLVELLKSCDYRTLAIGDG-GNDVRMIQKADIGVGIS--GR-EGLQAAR---AADYSIGKFRFLKR 793 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~vgIam~--gn-~~~~~~~---~Ad~v~~~~~~l~~ 793 (826)
.+++.++...++++||||+ .||++|++.||++.++. |+ +.+++++ .||+++.++..|..
T Consensus 191 ~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el~~ 256 (266)
T 3pdw_A 191 QAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEWIP 256 (266)
T ss_dssp HHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEESSGGGGHH
T ss_pred HHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHHHH
Confidence 4566666677899999999 79999999999987662 22 3344554 39999999887765
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.33 E-value=5e-07 Score=90.79 Aligned_cols=116 Identities=16% Similarity=0.077 Sum_probs=86.3
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.|++.++++.++ .|++++++|+.+...+....+.+|+....+.
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~---------------------------------- 151 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKK---------------------------------- 151 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSE----------------------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhcee----------------------------------
Confidence 46789999999999 9999999999998888888888887332110
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cH----HHHHHHhhcCCCeEEEEcCCc-ccHHhHHhCCc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QK----AQLVELLKSCDYRTLAIGDGG-NDVRMIQKADI 765 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K----~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~v 765 (826)
.+..+..+. .| ..+++.++...+++++|||+. ||++|.+.||+
T Consensus 152 ------------------------------~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~ 201 (240)
T 3qnm_A 152 ------------------------------IILSEDLGVLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGM 201 (240)
T ss_dssp ------------------------------EEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTC
T ss_pred ------------------------------EEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCC
Confidence 011111111 12 246666666788999999995 99999999999
Q ss_pred cEEecCCchH--HHHhhccccccchhcchhh
Q 003364 766 GVGISGREGL--QAARAADYSIGKFRFLKRL 794 (826)
Q Consensus 766 gIam~gn~~~--~~~~~Ad~v~~~~~~l~~l 794 (826)
+++| .|.+. ..+..+|+++.++..+..+
T Consensus 202 ~~~~-~~~~~~~~~~~~~d~vi~sl~e~~~~ 231 (240)
T 3qnm_A 202 HQAF-YNVTERTVFPFQPTYHIHSLKELMNL 231 (240)
T ss_dssp EEEE-ECCSCCCCCSSCCSEEESSTHHHHHH
T ss_pred eEEE-EcCCCCCCcCCCCceEECCHHHHHHH
Confidence 9999 55444 4445899999998888763
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.33 E-value=5.5e-07 Score=90.20 Aligned_cols=125 Identities=11% Similarity=0.087 Sum_probs=86.9
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.++.|+++|++++++|+.+...+....+.+|+....+. ++.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~----------------------------- 143 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDH--LLS----------------------------- 143 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEE-----------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhhe--EEE-----------------------------
Confidence 5779999999999999999999999999888888888887322110 000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecC-
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG- 771 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g- 771 (826)
+.. .. ...-.|.--..+++.++...+++++|||+.||+.|.+.||++++|..
T Consensus 144 ------~~~-----------------~~----~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~ 196 (232)
T 1zrn_A 144 ------VDP-----------------VQ----VYKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINR 196 (232)
T ss_dssp ------SGG-----------------GT----CCTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECT
T ss_pred ------ecc-----------------cC----CCCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcC
Confidence 000 00 00001111234667777677899999999999999999999998822
Q ss_pred --CchHHHHhhccccccchhcchhhe
Q 003364 772 --REGLQAARAADYSIGKFRFLKRLI 795 (826)
Q Consensus 772 --n~~~~~~~~Ad~v~~~~~~l~~l~ 795 (826)
+..+..+..+|+++.++..+..++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~el~~~l 222 (232)
T 1zrn_A 197 TGNVFEEMGQTPDWEVTSLRAVVELF 222 (232)
T ss_dssp TCCCCCSSSCCCSEEESSHHHHHTTC
T ss_pred CCCCccccCCCCCEEECCHHHHHHHH
Confidence 222334457899998887776643
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.30 E-value=1.1e-06 Score=87.66 Aligned_cols=126 Identities=21% Similarity=0.324 Sum_probs=85.5
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+++|++++++||.+...+..+++.+|+.... +....
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~----~f~~~--------------------------- 134 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN----VFANR--------------------------- 134 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG----EEEEC---------------------------
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCccc----EEeee---------------------------
Confidence 68899999999999999999999999999999999999984200 00000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeE-EEEeC-----cccHHHHHHHhhcC-C-CeEEEEcCCcccHHhHHhCC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAI-CCRVT-----PSQKAQLVELLKSC-D-YRTLAIGDGGNDVRMIQKAD 764 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~-----p~~K~~iv~~l~~~-~-~~v~~iGDg~ND~~ml~~A~ 764 (826)
+.. .....+ ..+.. +..|..+++.+... + +++++|||+.||++|.+.||
T Consensus 135 --~~~---------------------~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag 191 (225)
T 1nnl_A 135 --LKF---------------------YFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPAD 191 (225)
T ss_dssp --EEE---------------------CTTSCEEEECTTSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSS
T ss_pred --EEE---------------------cCCCcEecCCCCCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCC
Confidence 000 000001 11111 22466555544332 2 68999999999999999999
Q ss_pred ccEEecCCc--hHHHHhhccccccchhcchh
Q 003364 765 IGVGISGRE--GLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 765 vgIam~gn~--~~~~~~~Ad~v~~~~~~l~~ 793 (826)
++|++ +.. .......+|+++.++..+..
T Consensus 192 ~~i~~-~~~~~~~~~~~~~~~~~~~~~el~~ 221 (225)
T 1nnl_A 192 AFIGF-GGNVIRQQVKDNAKWYITDFVELLG 221 (225)
T ss_dssp EEEEE-CSSCCCHHHHHHCSEEESCGGGGCC
T ss_pred eEEEe-cCccccHHHHhcCCeeecCHHHHHH
Confidence 98888 432 23344578999988877755
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.30 E-value=1.1e-06 Score=88.58 Aligned_cols=115 Identities=13% Similarity=0.135 Sum_probs=83.5
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+++|+++.++|+.+...+....+.+|+. .-+
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~----------------------------------- 153 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFD----------------------------------- 153 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCS-----------------------------------
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-cee-----------------------------------
Confidence 35689999999999999999999999888888888888863 211
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCccc--H----HHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQ--K----AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~--K----~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
..+..+..+.. | ..+++.++...+++++|||+.||+.|.+.||+.
T Consensus 154 -----------------------------~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~ 204 (240)
T 2hi0_A 154 -----------------------------FALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMD 204 (240)
T ss_dssp -----------------------------EEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCE
T ss_pred -----------------------------EEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCe
Confidence 11111111111 2 356677777788999999999999999999984
Q ss_pred ---EEecCCc-hHHHHh-hccccccchhcchh
Q 003364 767 ---VGISGRE-GLQAAR-AADYSIGKFRFLKR 793 (826)
Q Consensus 767 ---Iam~gn~-~~~~~~-~Ad~v~~~~~~l~~ 793 (826)
|++ ++. ..++++ .||+++.++..+..
T Consensus 205 ~v~v~~-~~~~~~~~~~~~a~~~~~~~~el~~ 235 (240)
T 2hi0_A 205 EIAVNW-GFRSVPFLQKHGATVIVDTAEKLEE 235 (240)
T ss_dssp EEEESS-SSSCHHHHHHTTCCCEECSHHHHHH
T ss_pred EEEECC-CCCchhHHHhcCCCEEECCHHHHHH
Confidence 344 442 345555 69999988777654
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.30 E-value=7.1e-07 Score=89.15 Aligned_cols=117 Identities=15% Similarity=0.081 Sum_probs=84.1
Q ss_pred ccCCchHHHHHHHHHcC-CeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 613 RLQDGVPETIETLRKAG-INFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~G-i~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
.+.+++.++++.|+++| ++++++|+.+...+....+.+|+....+
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~---------------------------------- 150 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD---------------------------------- 150 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh----------------------------------
Confidence 56799999999999999 9999999998888888888888632111
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCccc--HHHHHHHhhcCCCeEEEEcCCc-ccHHhHHhCCccEE
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQ--KAQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIGVG 768 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~--K~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~vgIa 768 (826)
.+...-.|+- -..+++.++...+++++|||+. ||++|.+.||++++
T Consensus 151 -------------------------------~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v 199 (234)
T 3ddh_A 151 -------------------------------HIEVMSDKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGV 199 (234)
T ss_dssp -------------------------------EEEEESCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEE
T ss_pred -------------------------------eeeecCCCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEE
Confidence 1111111211 1246666666788999999996 99999999999998
Q ss_pred ec------CCchHHHHh-hccccccchhcchhh
Q 003364 769 IS------GREGLQAAR-AADYSIGKFRFLKRL 794 (826)
Q Consensus 769 m~------gn~~~~~~~-~Ad~v~~~~~~l~~l 794 (826)
|. |++..+.+. .+|+++.++..|..+
T Consensus 200 ~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~ 232 (234)
T 3ddh_A 200 HIPFEVMWKHEVTETFAHERLKQVKRLDDLLSL 232 (234)
T ss_dssp ECCCCTTCCCC---CCCCTTEEECSSGGGHHHH
T ss_pred EecCCcccccCCcccccCCCceecccHHHHHHh
Confidence 84 344444344 449999998877653
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.30 E-value=9.1e-07 Score=90.93 Aligned_cols=59 Identities=15% Similarity=0.156 Sum_probs=44.9
Q ss_pred HHHHHhhcCCCeEEEEcCC-cccHHhHHhCC---ccEEecCCchHHHHh--------hccccccchhcchhh
Q 003364 735 QLVELLKSCDYRTLAIGDG-GNDVRMIQKAD---IGVGISGREGLQAAR--------AADYSIGKFRFLKRL 794 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~---vgIam~gn~~~~~~~--------~Ad~v~~~~~~l~~l 794 (826)
.+++.++...+++++|||+ .||+.|.+.|| ++|++ |+...+... .+|+++.++..|..+
T Consensus 195 ~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~-g~~~~~~~~~~~~~~~~~~d~v~~~~~el~~~ 265 (268)
T 3qgm_A 195 EALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLT-GVTTRENLDQMIERHGLKPDYVFNSLKDMVEA 265 (268)
T ss_dssp HHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESS-SSCCTTTHHHHHHHHTCCCSEEESSHHHHHHT
T ss_pred HHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECC-CCCCHHHHHhhccccCCCCCEEECCHHHHHHH
Confidence 4556666667899999999 69999999999 57776 665433332 689999998877664
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=6.7e-07 Score=90.13 Aligned_cols=118 Identities=12% Similarity=0.019 Sum_probs=84.8
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.++.|+++|++++++|+.+...+..+.+.+|+....+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 150 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDS---------------------------------- 150 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCE----------------------------------
Confidence 5779999999999999999999999999989899999887432110
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEe----Ccc--cHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV----TPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
.+..+. .|. --..+++.++...+++++|||+.||++|.+.||++
T Consensus 151 ------------------------------~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~ 200 (240)
T 2no4_A 151 ------------------------------CLSADDLKIYKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFN 200 (240)
T ss_dssp ------------------------------EEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred ------------------------------EEEccccCCCCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCE
Confidence 000011 111 12346677777788999999999999999999976
Q ss_pred EEec--CCchHHHHhhc-cccccchhcchhh
Q 003364 767 VGIS--GREGLQAARAA-DYSIGKFRFLKRL 794 (826)
Q Consensus 767 Iam~--gn~~~~~~~~A-d~v~~~~~~l~~l 794 (826)
.++. ++..+..+..+ |+++.++..+..+
T Consensus 201 ~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~ 231 (240)
T 2no4_A 201 TVRINRQGNPPEYEFAPLKHQVNSLSELWPL 231 (240)
T ss_dssp EEEECTTCCCCCCTTSCCSEEESSGGGHHHH
T ss_pred EEEECCCCCCCcccCCCCceeeCCHHHHHHH
Confidence 5441 33322334467 9999888777664
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.2e-06 Score=90.55 Aligned_cols=121 Identities=8% Similarity=-0.006 Sum_probs=84.9
Q ss_pred ccCCchHHHHHHHHHc-CCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 613 RLQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~-Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
.+.+++.+.++.|++. |+++.++|+.....+....+.+|+... .. ++
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~f-~~--i~----------------------------- 161 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKRP-EY--FI----------------------------- 161 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCCC-SS--EE-----------------------------
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCcc-CE--EE-----------------------------
Confidence 4579999999999999 999999999999888888888876321 00 10
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhc-------CCCeEEEEcCCcccHHhHHhCC
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-------CDYRTLAIGDGGNDVRMIQKAD 764 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~-------~~~~v~~iGDg~ND~~ml~~A~ 764 (826)
.+.. .... .-.|.--..+++.++. ..+++++|||+.||++|++.||
T Consensus 162 ------~~~~-----------------~~~~----kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG 214 (275)
T 2qlt_A 162 ------TAND-----------------VKQG----KPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAG 214 (275)
T ss_dssp ------CGGG-----------------CSSC----TTSSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTT
T ss_pred ------Eccc-----------------CCCC----CCChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcC
Confidence 0000 0000 0011112456777777 7789999999999999999999
Q ss_pred ccEEe--cCCchHHHHh-hccccccchhcch
Q 003364 765 IGVGI--SGREGLQAAR-AADYSIGKFRFLK 792 (826)
Q Consensus 765 vgIam--~gn~~~~~~~-~Ad~v~~~~~~l~ 792 (826)
++++| .+++..+.++ .||+++.++..+.
T Consensus 215 ~~~i~v~~~~~~~~~~~~~ad~v~~~~~el~ 245 (275)
T 2qlt_A 215 CKIVGIATTFDLDFLKEKGCDIIVKNHESIR 245 (275)
T ss_dssp CEEEEESSSSCHHHHTTSSCSEEESSGGGEE
T ss_pred CEEEEECCCCCHHHHhhCCCCEEECChHHcC
Confidence 87766 2455556666 5999998876653
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.27 E-value=7.7e-07 Score=89.95 Aligned_cols=124 Identities=12% Similarity=0.036 Sum_probs=80.8
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
.++.+++.++++.|++.|++++++|+.+...+....+. |+...-....++
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~----------------------------- 156 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMV----------------------------- 156 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEE-----------------------------
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEE-----------------------------
Confidence 46779999999999999999999999987777777666 763321000000
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
.+ ..+ ..--|. --..+++.++...+++++|||+.||++|.+.||++..+
T Consensus 157 ------~~----------------------~~~-~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~ 207 (247)
T 3dv9_A 157 ------TA----------------------FDV-KYGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIA 207 (247)
T ss_dssp ------CG----------------------GGC-SSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEE
T ss_pred ------ec----------------------ccC-CCCCCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEE
Confidence 00 000 000111 12357777777788999999999999999999976433
Q ss_pred cCCc---hHHHHh-hccccccchhcchhh
Q 003364 770 SGRE---GLQAAR-AADYSIGKFRFLKRL 794 (826)
Q Consensus 770 ~gn~---~~~~~~-~Ad~v~~~~~~l~~l 794 (826)
..++ ..++.+ .||+++.++..|..+
T Consensus 208 v~~~~~~~~~l~~~~ad~v~~~~~el~~~ 236 (247)
T 3dv9_A 208 VNTGPLHDNVLLNEGANLLFHSMPDFNKN 236 (247)
T ss_dssp ECCSSSCHHHHHTTTCSEEESSHHHHHHH
T ss_pred EcCCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 1332 223333 799999998887664
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.25 E-value=7.4e-07 Score=90.02 Aligned_cols=124 Identities=15% Similarity=0.074 Sum_probs=83.0
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
..+.+++.+.++.|++.|++++++|+.+...+...... |+........++
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~----------------------------- 157 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMV----------------------------- 157 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEE-----------------------------
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEE-----------------------------
Confidence 35779999999999999999999999987777766666 663321000000
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCc--ccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
.+. .+ ..-.| .--..+++.++...+++++|||+.||++|.+.||++.++
T Consensus 158 ------~~~----------------------~~-~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~ 208 (243)
T 3qxg_A 158 ------TAF----------------------DV-KYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIA 208 (243)
T ss_dssp ------CTT----------------------TC-SSCTTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEE
T ss_pred ------eHH----------------------hC-CCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEE
Confidence 000 00 00011 112356777777788999999999999999999985544
Q ss_pred cCCc---hHHHHh-hccccccchhcchhh
Q 003364 770 SGRE---GLQAAR-AADYSIGKFRFLKRL 794 (826)
Q Consensus 770 ~gn~---~~~~~~-~Ad~v~~~~~~l~~l 794 (826)
..++ ..++.+ .||+++.++..|..+
T Consensus 209 v~~~~~~~~~l~~~~ad~v~~s~~el~~~ 237 (243)
T 3qxg_A 209 VNTGPLDGQVLLDAGADLLFPSMQTLCDS 237 (243)
T ss_dssp ECCSSSCHHHHHHTTCSEEESCHHHHHHH
T ss_pred EeCCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 2433 223333 699999998877653
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.25 E-value=2.9e-06 Score=85.49 Aligned_cols=118 Identities=15% Similarity=0.175 Sum_probs=83.8
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.+++.+.++.|++.|++++++|+.+...+....+.+|+...-+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 139 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEH---------------------------------- 139 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccE----------------------------------
Confidence 4679999999999999999999999998888888888887322110
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccH------HHHHHHhhcCCCeEEEEcCCc-ccHHhHHhCCc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK------AQLVELLKSCDYRTLAIGDGG-NDVRMIQKADI 765 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K------~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~v 765 (826)
.+..+..+..| ..+++.++...+++++|||+. ||++|.+.||+
T Consensus 140 ------------------------------~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~ 189 (241)
T 2hoq_A 140 ------------------------------VIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGM 189 (241)
T ss_dssp ------------------------------EEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTC
T ss_pred ------------------------------EEEeCCCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCC
Confidence 00001111111 346667776778999999998 99999999999
Q ss_pred cEEec--CCchHHHHh---hccccccchhcchhh
Q 003364 766 GVGIS--GREGLQAAR---AADYSIGKFRFLKRL 794 (826)
Q Consensus 766 gIam~--gn~~~~~~~---~Ad~v~~~~~~l~~l 794 (826)
+++.. |....+... .+|+++.++..+..+
T Consensus 190 ~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~ 223 (241)
T 2hoq_A 190 KTVWFRYGKHSERELEYRKYADYEIDNLESLLEV 223 (241)
T ss_dssp EEEEECCSCCCHHHHTTGGGCSEEESSTTHHHHH
T ss_pred EEEEECCCCCCcccccccCCCCEEECCHHHHHHH
Confidence 86552 333233332 689998888777554
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.23 E-value=1.1e-06 Score=87.55 Aligned_cols=114 Identities=12% Similarity=0.153 Sum_probs=81.5
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCC-CCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE-PKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
++.+++.+.++.++. +++++|+.+...+....+.+|+...- .. +
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~--~------------------------------ 131 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPH--I------------------------------ 131 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTC--E------------------------------
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccce--E------------------------------
Confidence 456788888887764 99999999998888888888874221 10 0
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEe------Ccc--cHHHHHHHhhcCCCeEEEEcCCcccHHhHHhC
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV------TPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKA 763 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~------~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A 763 (826)
+..+. .|+ --..+++.++...+++++|||+.||++|++.|
T Consensus 132 --------------------------------~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~a 179 (229)
T 2fdr_A 132 --------------------------------YSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAA 179 (229)
T ss_dssp --------------------------------EEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHT
T ss_pred --------------------------------EeccccccCCCCcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHC
Confidence 00000 111 12356677777788999999999999999999
Q ss_pred Ccc-EEecCCchH-------HHHhh-ccccccchhcchhh
Q 003364 764 DIG-VGISGREGL-------QAARA-ADYSIGKFRFLKRL 794 (826)
Q Consensus 764 ~vg-Iam~gn~~~-------~~~~~-Ad~v~~~~~~l~~l 794 (826)
|++ |+| +++.. ++++. ||+++.++..+..+
T Consensus 180 G~~~i~~-~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~ 218 (229)
T 2fdr_A 180 GMRVIGF-TGASHTYPSHADRLTDAGAETVISRMQDLPAV 218 (229)
T ss_dssp TCEEEEE-CCSTTCCTTHHHHHHHHTCSEEESCGGGHHHH
T ss_pred CCEEEEE-ecCCccchhhhHHHhhcCCceeecCHHHHHHH
Confidence 998 666 55433 47776 99999988877653
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.22 E-value=6.8e-07 Score=89.01 Aligned_cols=124 Identities=19% Similarity=0.220 Sum_probs=85.4
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
-++.|++.++++.|+++|++++++|+.+...+..+.+.+|+...-+. +
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~---i----------------------------- 129 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDL---I----------------------------- 129 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE---E-----------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheE---E-----------------------------
Confidence 35789999999999999999999999999888899999887322110 0
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc-EEec
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VGIS 770 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg-Iam~ 770 (826)
+.+. ......-.|.--..+++.++..++++++|||+.||++|.+.||++ |++.
T Consensus 130 -----~~~~---------------------~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~ 183 (222)
T 2nyv_A 130 -----VGGD---------------------TFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALAL 183 (222)
T ss_dssp -----ECTT---------------------SSCTTCCTTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEET
T ss_pred -----EecC---------------------cCCCCCCChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEc
Confidence 0000 000000012223456777777778999999999999999999988 6652
Q ss_pred -CCchHHHHhhccccccchhcchhh
Q 003364 771 -GREGLQAARAADYSIGKFRFLKRL 794 (826)
Q Consensus 771 -gn~~~~~~~~Ad~v~~~~~~l~~l 794 (826)
|+...+. ..+|+++.++..+..+
T Consensus 184 ~g~~~~~~-~~~~~~~~~~~el~~~ 207 (222)
T 2nyv_A 184 WGYVKLNS-QIPDFTLSRPSDLVKL 207 (222)
T ss_dssp TSSCSCCC-CCCSEEESSTTHHHHH
T ss_pred CCCCCccc-cCCCEEECCHHHHHHH
Confidence 3322222 5688998888776554
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.19 E-value=4.7e-07 Score=92.05 Aligned_cols=114 Identities=10% Similarity=0.035 Sum_probs=84.5
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.+++.++++.|++. ++++++|+.+...+..+.+.+|+. . + .+.
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~-f-~---~~~----------------------------- 164 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP-W-D---MLL----------------------------- 164 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC-C-S---EEC-----------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC-c-c---eEE-----------------------------
Confidence 4678999999999985 999999999998888888888873 1 0 000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEe--CcccH----HHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV--TPSQK----AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~p~~K----~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
. .+. ..+.| ..+++.++...+++++|||+.||++|.+.||++
T Consensus 165 -----~---------------------------~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~ 212 (254)
T 3umc_A 165 -----C---------------------------ADLFGHYKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLK 212 (254)
T ss_dssp -----C---------------------------HHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCE
T ss_pred -----e---------------------------ecccccCCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCe
Confidence 0 000 11122 346667776788999999999999999999999
Q ss_pred EEecCC--------chHHH--Hhhccccccchhcchhh
Q 003364 767 VGISGR--------EGLQA--ARAADYSIGKFRFLKRL 794 (826)
Q Consensus 767 Iam~gn--------~~~~~--~~~Ad~v~~~~~~l~~l 794 (826)
++| .+ +.+++ +..||+++.++..|..+
T Consensus 213 ~~~-~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~ 249 (254)
T 3umc_A 213 TAF-IARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQ 249 (254)
T ss_dssp EEE-ECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHH
T ss_pred EEE-EecCCccCCCCCcccccCCCCcEEECCHHHHHHH
Confidence 999 54 22233 45799999998888764
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.18 E-value=2e-06 Score=86.52 Aligned_cols=136 Identities=12% Similarity=0.175 Sum_probs=88.5
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++|+.|+++|++++++|+.+...+..+++ |+... + .++..+.... ...
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~--~v~~~~~~~~--------------------~~~ 131 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-D--RIYCNHASFD--------------------NDY 131 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-G--GEEEEEEECS--------------------SSB
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-C--eEEeeeeEEc--------------------CCc
Confidence 678999999999999999999999999888888776 65332 1 1221110000 000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn 772 (826)
..... . ......+.+-....|..+++.++...+++++|||+.+|++|.+.||+.++. ..
T Consensus 132 ~~~~~-~-------------------kp~p~~~~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~-~~ 190 (236)
T 2fea_A 132 IHIDW-P-------------------HSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR-DY 190 (236)
T ss_dssp CEEEC-T-------------------TCCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC-HH
T ss_pred eEEec-C-------------------CCCccccccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeec-hH
Confidence 00000 0 000000001124468899999988889999999999999999999998875 32
Q ss_pred chHHHHhh--ccccccchhcchhh
Q 003364 773 EGLQAARA--ADYSIGKFRFLKRL 794 (826)
Q Consensus 773 ~~~~~~~~--Ad~v~~~~~~l~~l 794 (826)
....+... +|+++.++..+..+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~el~~~ 214 (236)
T 2fea_A 191 LLNECREQNLNHLPYQDFYEIRKE 214 (236)
T ss_dssp HHHHHHHTTCCEECCSSHHHHHHH
T ss_pred HHHHHHHCCCCeeecCCHHHHHHH
Confidence 33334443 78888888777654
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.18 E-value=1.9e-06 Score=86.42 Aligned_cols=118 Identities=19% Similarity=0.178 Sum_probs=85.1
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.|++.++++.|++. ++++++|+.....+....+.+|+....+
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~----------------------------------- 146 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFK----------------------------------- 146 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhh-----------------------------------
Confidence 5779999999999999 9999999999988888888888732211
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCccc--H----HHHHHHhh-cCCCeEEEEcCCc-ccHHhHHhCC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQ--K----AQLVELLK-SCDYRTLAIGDGG-NDVRMIQKAD 764 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~--K----~~iv~~l~-~~~~~v~~iGDg~-ND~~ml~~A~ 764 (826)
..+..+-.+.. | ..+++.++ ...+++++|||+. ||++|.+.||
T Consensus 147 -----------------------------~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG 197 (238)
T 3ed5_A 147 -----------------------------DIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAG 197 (238)
T ss_dssp -----------------------------EEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTT
T ss_pred -----------------------------eEEEecccCCCCCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCC
Confidence 00111111111 2 24566666 6678999999998 9999999999
Q ss_pred ccEEecCC--chHHHHhhccccccchhcchhhe
Q 003364 765 IGVGISGR--EGLQAARAADYSIGKFRFLKRLI 795 (826)
Q Consensus 765 vgIam~gn--~~~~~~~~Ad~v~~~~~~l~~l~ 795 (826)
++.++.+. .....+..||+++.++..|..++
T Consensus 198 ~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 198 LDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp CEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred CEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 96544233 24445558999999998887754
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.17 E-value=2.7e-06 Score=91.29 Aligned_cols=42 Identities=17% Similarity=0.226 Sum_probs=39.4
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~ 654 (826)
++.|++++.|+.|+++|++|+|+||.....+.++|.++|+..
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y 262 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNY 262 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSC
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCccc
Confidence 578999999999999999999999999999999999998743
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.14 E-value=2e-06 Score=87.41 Aligned_cols=115 Identities=16% Similarity=0.136 Sum_probs=84.0
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+ |++++++|+.+...+....+.+|+....+.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~---------------------------------- 136 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDA---------------------------------- 136 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccE----------------------------------
Confidence 57799999999999 999999999999999889888887322110
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEe----Ccc--cHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV----TPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
.+..+. .|. --..+++.++...+++++|||+.||++|.+.||++
T Consensus 137 ------------------------------~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~ 186 (253)
T 1qq5_A 137 ------------------------------VISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFS 186 (253)
T ss_dssp ------------------------------EEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred ------------------------------EEEccccCCCCCCHHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCE
Confidence 011010 111 12346667776778999999999999999999999
Q ss_pred EEecCCc-----------------------h----HHHHhhccccccchhcchhh
Q 003364 767 VGISGRE-----------------------G----LQAARAADYSIGKFRFLKRL 794 (826)
Q Consensus 767 Iam~gn~-----------------------~----~~~~~~Ad~v~~~~~~l~~l 794 (826)
++| .+. + +..+..+|+++.++..+..+
T Consensus 187 ~~~-~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 240 (253)
T 1qq5_A 187 VAR-VARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRL 240 (253)
T ss_dssp EEE-ECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHH
T ss_pred EEE-ECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCCHHHHHHH
Confidence 988 444 1 12234689998888877664
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=98.12 E-value=6.7e-06 Score=79.19 Aligned_cols=105 Identities=18% Similarity=0.199 Sum_probs=71.2
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCce
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 693 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (826)
+.|++.+.++.|++.|++++++|+.+. .+....+.+|+...-+
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~------------------------------------ 125 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFT------------------------------------ 125 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEE------------------------------------
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhee------------------------------------
Confidence 579999999999999999999999864 5667777777622100
Q ss_pred EEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecC
Q 003364 694 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771 (826)
Q Consensus 694 ~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g 771 (826)
.+..+. .+ ..-.|. --..+++.++.. ++++|||+.||++|++.||+++++ -
T Consensus 126 -~~~~~~----------------------~~-~~~kp~~~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~-~ 178 (190)
T 2fi1_A 126 -EVVTSS----------------------SG-FKRKPNPESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHL-F 178 (190)
T ss_dssp -EEECGG----------------------GC-CCCTTSCHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEE-C
T ss_pred -eeeecc----------------------cc-CCCCCCHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEE-E
Confidence 000000 00 000111 123455666545 899999999999999999999988 6
Q ss_pred CchHHHHhhcc
Q 003364 772 REGLQAARAAD 782 (826)
Q Consensus 772 n~~~~~~~~Ad 782 (826)
+.+...++..+
T Consensus 179 ~~~~~~~~~l~ 189 (190)
T 2fi1_A 179 TSIVNLRQVLD 189 (190)
T ss_dssp SCHHHHHHHHT
T ss_pred CCCCChhhccC
Confidence 66776766544
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=98.08 E-value=2.8e-06 Score=82.86 Aligned_cols=119 Identities=8% Similarity=0.069 Sum_probs=80.5
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+ ++.|+++ ++++++|+.+...+..+.+.+|+...-+. ++
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~------------------------------ 119 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKG--IF------------------------------ 119 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSE--EE------------------------------
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcE--EE------------------------------
Confidence 56799999 9999999 99999999999888888888887322110 00
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecC-
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG- 771 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g- 771 (826)
.+.. .. ...-.|.--..+++.++ .+++++|||+.||+.|.+.||+++++..
T Consensus 120 -----~~~~-----------------~~----~~Kp~~~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~ 171 (201)
T 2w43_A 120 -----SAES-----------------VK----EYKPSPKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNR 171 (201)
T ss_dssp -----EGGG-----------------GT----CCTTCHHHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECS
T ss_pred -----ehhh-----------------cC----CCCCCHHHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECC
Confidence 0000 00 00001111235666666 7889999999999999999999987722
Q ss_pred --CchHHHHhhccccccchhcchh
Q 003364 772 --REGLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 772 --n~~~~~~~~Ad~v~~~~~~l~~ 793 (826)
+..+..+..||+++.++..+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~el~~ 195 (201)
T 2w43_A 172 KNTIVDPIGGKPDVIVNDFKELYE 195 (201)
T ss_dssp SSCCCCTTSCCCSEEESSHHHHHH
T ss_pred CCCCccccCCCCCEEECCHHHHHH
Confidence 2222333468888888777655
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.08 E-value=5.1e-06 Score=81.80 Aligned_cols=134 Identities=17% Similarity=0.223 Sum_probs=81.6
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCCh---------------hHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHH
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQ---------------NTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLE 677 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~---------------~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (826)
++.|++.++|++|+++|++++++|+++. ..+....+.+|+. .. .++...... +
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-f~---~~~~~~~~~-~------- 117 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD-LD---GIYYCPHHP-Q------- 117 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC-CS---EEEEECCBT-T-------
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc-eE---EEEECCcCC-C-------
Confidence 6789999999999999999999999994 5666777777763 10 011000000 0
Q ss_pred HHHHHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccH
Q 003364 678 RVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDV 757 (826)
Q Consensus 678 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~ 757 (826)
+.. .. .........-.|.--..+++.++...+++++|||+.||+
T Consensus 118 ---------------------~~~------------~~---~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di 161 (211)
T 2gmw_A 118 ---------------------GSV------------EE---FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDM 161 (211)
T ss_dssp ---------------------CSS------------GG---GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHH
T ss_pred ---------------------Ccc------------cc---cCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHH
Confidence 000 00 000000000011112346677777788999999999999
Q ss_pred HhHHhCCcc--EEe-cCCchHHH-Hhhccccccchhcchhh
Q 003364 758 RMIQKADIG--VGI-SGREGLQA-ARAADYSIGKFRFLKRL 794 (826)
Q Consensus 758 ~ml~~A~vg--Iam-~gn~~~~~-~~~Ad~v~~~~~~l~~l 794 (826)
.|.+.||+. |.+ .|....+. ...+|+++.++..+..+
T Consensus 162 ~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~ 202 (211)
T 2gmw_A 162 QAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 202 (211)
T ss_dssp HHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred HHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHH
Confidence 999999975 444 13322233 34689999888777654
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=98.07 E-value=1.2e-06 Score=88.80 Aligned_cols=119 Identities=8% Similarity=0.048 Sum_probs=85.1
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.+++.++++.|++. ++++++|+.+...+..+.+.+|+.. +. ++. .+.
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f-~~---~~~-----~~~--------------------- 164 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPW-DV---IIG-----SDI--------------------- 164 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCC-SC---CCC-----HHH---------------------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCe-eE---EEE-----cCc---------------------
Confidence 5678999999999997 9999999999998888888888731 00 000 000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCccc--HHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEec
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQ--KAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~--K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~ 770 (826)
.....|.- =..+++.++...+++++|||+.||+.|.+.||++++|
T Consensus 165 --------------------------------~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~- 211 (254)
T 3umg_A 165 --------------------------------NRKYKPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAF- 211 (254)
T ss_dssp --------------------------------HTCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEE-
T ss_pred --------------------------------CCCCCCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEE-
Confidence 00011211 1246666666788999999999999999999999999
Q ss_pred CCchH--------HH--Hhhccccccchhcchhhe
Q 003364 771 GREGL--------QA--ARAADYSIGKFRFLKRLI 795 (826)
Q Consensus 771 gn~~~--------~~--~~~Ad~v~~~~~~l~~l~ 795 (826)
.+... ++ +..+|+++.++..|..++
T Consensus 212 ~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l 246 (254)
T 3umg_A 212 ILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQL 246 (254)
T ss_dssp ECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHH
T ss_pred EecCCcCCCCccccccccCCCceEECCHHHHHHHh
Confidence 44211 12 457899999998887754
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.04 E-value=3.5e-06 Score=86.26 Aligned_cols=123 Identities=11% Similarity=0.055 Sum_probs=84.7
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|++.|++++++|+.+. .+..+.+.+|+...-.. ++.
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~~--~~~----------------------------- 153 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFDF--VLT----------------------------- 153 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCSC--EEE-----------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhhE--EEe-----------------------------
Confidence 4679999999999999999999999765 46778888887432111 000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCc-ccHHhHHhCCccEEecC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIGVGISG 771 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~vgIam~g 771 (826)
+.. .. ...-.|.--..+++.++...+++++|||+. ||+.|.+.||++++| .
T Consensus 154 ------~~~-----------------~~----~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~-~ 205 (263)
T 3k1z_A 154 ------SEA-----------------AG----WPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFL-V 205 (263)
T ss_dssp ------HHH-----------------HS----SCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEE-E
T ss_pred ------ecc-----------------cC----CCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEE-E
Confidence 000 00 000011223456777777788999999997 999999999999998 3
Q ss_pred CchHH-----HHh-hccccccchhcchhhe
Q 003364 772 REGLQ-----AAR-AADYSIGKFRFLKRLI 795 (826)
Q Consensus 772 n~~~~-----~~~-~Ad~v~~~~~~l~~l~ 795 (826)
+.+.. ... .||+++.++..|..++
T Consensus 206 ~~~~~~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 206 VGPQALDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp CCSSCCCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred cCCCCCchhhcccCCCceEeCCHHHHHHHH
Confidence 33321 122 6899999988887654
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=1.4e-05 Score=81.96 Aligned_cols=43 Identities=21% Similarity=0.194 Sum_probs=38.8
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEc---CCChhHHHHHHHHcCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFIS 654 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~T---Gd~~~~a~~~a~~~gi~~ 654 (826)
.++.+++.++|++++++|++++++| ||+.......++.+|+..
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 6688999999999999999999999 999999988889998743
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=98.01 E-value=1.2e-05 Score=77.40 Aligned_cols=90 Identities=16% Similarity=0.097 Sum_probs=68.8
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCC-hhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDK-QNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~-~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
++.|++.++|++|+++|++++++||++ ...+..+.+.+|+....+
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~---------------------------------- 113 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFV---------------------------------- 113 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEE----------------------------------
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcc----------------------------------
Confidence 578999999999999999999999999 688999999998742210
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccH----HHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK----AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K----~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI 767 (826)
.+ .+.+..| ..+++.++...+++++|||+.+|+.+.+.||+..
T Consensus 114 -------------------------------~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~ 160 (187)
T 2wm8_A 114 -------------------------------HR--EIYPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTC 160 (187)
T ss_dssp -------------------------------EE--EESSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred -------------------------------ee--EEEeCchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEE
Confidence 00 0122233 3355566666788999999999999999999865
Q ss_pred Ee
Q 003364 768 GI 769 (826)
Q Consensus 768 am 769 (826)
..
T Consensus 161 i~ 162 (187)
T 2wm8_A 161 IH 162 (187)
T ss_dssp EE
T ss_pred EE
Confidence 43
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.97 E-value=3.4e-05 Score=78.86 Aligned_cols=42 Identities=12% Similarity=0.154 Sum_probs=37.3
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEc---CCChhHHHHHHHHcCCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFIS 654 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~T---Gd~~~~a~~~a~~~gi~~ 654 (826)
.+.+.+.++++.+++.|++++++| ||+...+.....++|+..
T Consensus 32 ~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~ 76 (271)
T 2x4d_A 32 TAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDI 76 (271)
T ss_dssp EECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCC
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCC
Confidence 367889999999999999999999 999999998888888743
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.89 E-value=2.5e-05 Score=79.11 Aligned_cols=116 Identities=13% Similarity=0.007 Sum_probs=81.4
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.+++.++++.|+ .|++++++|+.+...+....+.+|+.....
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~----------------------------------- 155 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFP----------------------------------- 155 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCC-----------------------------------
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCc-----------------------------------
Confidence 46799999999999 999999999999888888887777632211
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhcCCCeEEEEcCCc-ccHHhHHhCCccEEe
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIGVGI 769 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~vgIam 769 (826)
.++..-.|. --..+++.++...+++++|||+. ||++|.+.||+++++
T Consensus 156 ------------------------------~i~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~ 205 (251)
T 2pke_A 156 ------------------------------RIEVVSEKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIY 205 (251)
T ss_dssp ------------------------------CEEEESCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEE
T ss_pred ------------------------------eeeeeCCCCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEE
Confidence 011111121 12356677777788999999999 999999999999877
Q ss_pred cCCchH------H-HH-hhccc-cccchhcchhh
Q 003364 770 SGREGL------Q-AA-RAADY-SIGKFRFLKRL 794 (826)
Q Consensus 770 ~gn~~~------~-~~-~~Ad~-v~~~~~~l~~l 794 (826)
...+.. + .. ..+|+ ++.++..|..+
T Consensus 206 v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~ 239 (251)
T 2pke_A 206 TPYAVTWAHEQDHGVAADEPRLREVPDPSGWPAA 239 (251)
T ss_dssp CCCC-------------CCTTEEECSSGGGHHHH
T ss_pred ECCCCccccccccccccCCCCeeeeCCHHHHHHH
Confidence 322211 1 22 25787 78887777653
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.88 E-value=1.3e-05 Score=80.25 Aligned_cols=120 Identities=8% Similarity=0.029 Sum_probs=80.7
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.+++.++++.|++ |++++++|+.+...+....+.++- .-+ .+
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~--~fd---~i------------------------------ 142 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV--EFD---HI------------------------------ 142 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS--CCS---EE------------------------------
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC--ccC---EE------------------------------
Confidence 578999999999999 899999999988877776655431 100 00
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHH---HHHhhcCCCeEEEEcCCc-ccHHhHHhCCccEE
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQL---VELLKSCDYRTLAIGDGG-NDVRMIQKADIGVG 768 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~i---v~~l~~~~~~v~~iGDg~-ND~~ml~~A~vgIa 768 (826)
+.+... . .....|.-...+ ++.++...+++++|||+. ||+.|.+.||++++
T Consensus 143 ----~~~~~~-----------------~----~~KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~ 197 (240)
T 3smv_A 143 ----ITAQDV-----------------G----SYKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSA 197 (240)
T ss_dssp ----EEHHHH-----------------T----SCTTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEE
T ss_pred ----EEcccc-----------------C----CCCCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEE
Confidence 000000 0 000011112234 566677788999999996 99999999999999
Q ss_pred ecCCch----------HHHH-hhccccccchhcchhh
Q 003364 769 ISGREG----------LQAA-RAADYSIGKFRFLKRL 794 (826)
Q Consensus 769 m~gn~~----------~~~~-~~Ad~v~~~~~~l~~l 794 (826)
| .+.+ .+.+ ..||+++.++..|..+
T Consensus 198 ~-~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~ 233 (240)
T 3smv_A 198 W-IYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEA 233 (240)
T ss_dssp E-ECTTCC-------CCCSSCCCCSEEESSHHHHHHH
T ss_pred E-EcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHH
Confidence 9 3322 2233 5899999998877664
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=97.87 E-value=3.1e-05 Score=79.13 Aligned_cols=43 Identities=21% Similarity=0.363 Sum_probs=37.7
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEc---CCChhHHHHHHHHcCCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFISP 655 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~T---Gd~~~~a~~~a~~~gi~~~ 655 (826)
..+ ++++++|++++++|++++++| ||+...+....+++|+...
T Consensus 21 ~~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 21 SRI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp EEC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred EEC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 355 899999999999999999999 8888888888999998543
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.81 E-value=8e-06 Score=80.21 Aligned_cols=105 Identities=13% Similarity=0.086 Sum_probs=71.9
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHH------cCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS------CNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRIT 686 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (826)
++.|++.++++.|++ |++++++|+.+...+..+.+. .|+...-+. ++
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~--~~------------------------ 141 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDK--VY------------------------ 141 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSE--EE------------------------
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCe--EE------------------------
Confidence 467899999999999 999999999988877777665 454221100 00
Q ss_pred cCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCC
Q 003364 687 TSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKAD 764 (826)
Q Consensus 687 ~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ 764 (826)
.+.. + ..--|. --..+++.++...+++++|||+.||++|.+.||
T Consensus 142 -----------~~~~----------------------~-~~~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG 187 (211)
T 2i6x_A 142 -----------ASCQ----------------------M-GKYKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLG 187 (211)
T ss_dssp -----------EHHH----------------------H-TCCTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTT
T ss_pred -----------eecc----------------------c-CCCCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcC
Confidence 0000 0 000111 123567777777889999999999999999999
Q ss_pred ccEEecCCchHHHHh
Q 003364 765 IGVGISGREGLQAAR 779 (826)
Q Consensus 765 vgIam~gn~~~~~~~ 779 (826)
++++| .+++.++++
T Consensus 188 ~~~~~-~~~~~~~~~ 201 (211)
T 2i6x_A 188 FHTYC-PDNGENWIP 201 (211)
T ss_dssp CEEEC-CCTTCCCHH
T ss_pred CEEEE-ECCHHHHHH
Confidence 99998 666554443
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.79 E-value=1.7e-05 Score=78.59 Aligned_cols=60 Identities=15% Similarity=-0.007 Sum_probs=41.4
Q ss_pred HHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE-Ee--cCCchH-HHHhhccccccchhcchhh
Q 003364 735 QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI--SGREGL-QAARAADYSIGKFRFLKRL 794 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI-am--~gn~~~-~~~~~Ad~v~~~~~~l~~l 794 (826)
.+++.++...+++++|||+.||+.|.+.||+.. .+ .|.... .....+|+++.++..|..+
T Consensus 145 ~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~~ 208 (218)
T 2o2x_A 145 EAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAA 208 (218)
T ss_dssp HHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHHH
T ss_pred HHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHHHH
Confidence 456666667789999999999999999999865 33 122221 1122578888777666553
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=97.79 E-value=4.5e-06 Score=84.18 Aligned_cols=58 Identities=12% Similarity=0.121 Sum_probs=43.2
Q ss_pred HHHHHhhcCCCeEEEEcCC-cccHHhHHhCCccEEe--cCCch-HHHH---hhccccccchhcch
Q 003364 735 QLVELLKSCDYRTLAIGDG-GNDVRMIQKADIGVGI--SGREG-LQAA---RAADYSIGKFRFLK 792 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~vgIam--~gn~~-~~~~---~~Ad~v~~~~~~l~ 792 (826)
.+++.++...+++++|||+ .||++|++.||+++++ .|+.. ++++ ..||+++.++..+.
T Consensus 184 ~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~el~ 248 (250)
T 2c4n_A 184 AALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEID 248 (250)
T ss_dssp HHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred HHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHHhh
Confidence 3555666667899999999 7999999999999655 25443 3444 36899998876654
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.68 E-value=2.9e-05 Score=75.46 Aligned_cols=103 Identities=9% Similarity=0.014 Sum_probs=72.0
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.|++.+.++.|+++| +++++|+.+...+....+.+|+...-+. ++..
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~--~~~~---------------------------- 134 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLA--FFTS---------------------------- 134 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSC--EEEH----------------------------
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcce--EEee----------------------------
Confidence 36799999999999999 9999999999888888888887432111 0000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn 772 (826)
.. .. ...-.|.--..+++.++...+++++|||+.||++|.+.||+.+++ -+
T Consensus 135 -------~~-----------------~~----~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~-~~ 185 (200)
T 3cnh_A 135 -------SA-----------------LG----VMKPNPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQ-CV 185 (200)
T ss_dssp -------HH-----------------HS----CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEE-CS
T ss_pred -------cc-----------------cC----CCCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEE-EC
Confidence 00 00 000011122356677777778999999999999999999999888 34
Q ss_pred chH
Q 003364 773 EGL 775 (826)
Q Consensus 773 ~~~ 775 (826)
.+.
T Consensus 186 ~~~ 188 (200)
T 3cnh_A 186 DAA 188 (200)
T ss_dssp CHH
T ss_pred Cch
Confidence 443
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.0001 Score=71.03 Aligned_cols=129 Identities=11% Similarity=0.095 Sum_probs=83.7
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCCh---hHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQ---NTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE 689 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~---~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (826)
++.|++.++++.|+++|++++++|+.+. ..+....+.+|+...-+. ++ ......
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~--i~-~~~~~~-------------------- 90 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDF--IY-ASNSEL-------------------- 90 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEE--EE-ECCTTS--------------------
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEE--EE-Eccccc--------------------
Confidence 5889999999999999999999999876 788888899997321100 00 000000
Q ss_pred CCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCC-cccHHhHHhCCccEE
Q 003364 690 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDG-GNDVRMIQKADIGVG 768 (826)
Q Consensus 690 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~vgIa 768 (826)
. ......-.|.--..+++.++...+++++|||+ .+|+.+-+.||+...
T Consensus 91 ------------------------------~-~~~~~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i 139 (189)
T 3ib6_A 91 ------------------------------Q-PGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAI 139 (189)
T ss_dssp ------------------------------S-TTCCCTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEE
T ss_pred ------------------------------c-ccCCCCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEE
Confidence 0 00000001111235667777778899999999 799999999998654
Q ss_pred ecCCchH-----HHHh-hcccccc--chhcchhhe
Q 003364 769 ISGREGL-----QAAR-AADYSIG--KFRFLKRLI 795 (826)
Q Consensus 769 m~gn~~~-----~~~~-~Ad~v~~--~~~~l~~l~ 795 (826)
...+... .... .+|+++. ++..|..++
T Consensus 140 ~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l 174 (189)
T 3ib6_A 140 WLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEAL 174 (189)
T ss_dssp EECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHH
T ss_pred EECCccccccccccccCCCcceeccccHHhHHHHH
Confidence 4233221 1222 6788888 777777754
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.61 E-value=4.2e-05 Score=76.05 Aligned_cols=60 Identities=17% Similarity=0.123 Sum_probs=46.1
Q ss_pred HHHHHHhhcCCCeEEEEcCCc-ccHHhHHhCCccEEecC---CchHHHHhhccccccchhcchhh
Q 003364 734 AQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIGVGISG---REGLQAARAADYSIGKFRFLKRL 794 (826)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~vgIam~g---n~~~~~~~~Ad~v~~~~~~l~~l 794 (826)
..+++.++...+++++|||+. ||+.|.+.||+++++.. +..+. ...+|+++.++..|..+
T Consensus 162 ~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~~l~el~~~ 225 (230)
T 3vay_A 162 LEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIHNLSQLPEV 225 (230)
T ss_dssp HHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEESSGGGHHHH
T ss_pred HHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeECCHHHHHHH
Confidence 356677777788999999997 99999999999987722 22222 44789999998887664
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00031 Score=73.33 Aligned_cols=43 Identities=21% Similarity=0.243 Sum_probs=37.2
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEc---CCChhHHHHHHHHcCCC
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFI 653 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~T---Gd~~~~a~~~a~~~gi~ 653 (826)
.+.+.+++.+++++|+++|++++++| ||+........+.+|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 45677899999999999999999999 57787777778888875
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00021 Score=70.18 Aligned_cols=114 Identities=18% Similarity=0.191 Sum_probs=77.1
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|++.|+++.++|+.+...+....+.+|+...-+. +
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~--~------------------------------- 130 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDV--M------------------------------- 130 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE--E-------------------------------
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccc--c-------------------------------
Confidence 4578999999999999999999999999999999999998432110 0
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc-E-Ee-
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-V-GI- 769 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg-I-am- 769 (826)
+... ..-...-.|.-=..+++.++..++++++|||+.+|+.+=+.||+. | ++
T Consensus 131 ----~~~~---------------------~~~~~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~ 185 (216)
T 3kbb_A 131 ----VFGD---------------------QVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVV 185 (216)
T ss_dssp ----ECGG---------------------GSSSCTTSTHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEEC
T ss_pred ----cccc---------------------ccCCCcccHHHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEec
Confidence 0000 000000011112357778887889999999999999999999974 3 22
Q ss_pred -cCCchHHHHhhcccc
Q 003364 770 -SGREGLQAARAADYS 784 (826)
Q Consensus 770 -~gn~~~~~~~~Ad~v 784 (826)
+.+..+++.++.+.+
T Consensus 186 ~g~~~~~~l~~~~~~~ 201 (216)
T 3kbb_A 186 HSLNDGKALLEAGAVA 201 (216)
T ss_dssp CSSSCCHHHHHTTCSE
T ss_pred CCCCCHHHHHhCCCcE
Confidence 123445566643333
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.55 E-value=2e-05 Score=71.20 Aligned_cols=99 Identities=12% Similarity=-0.001 Sum_probs=67.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+++++|+++|++++++|+++...+....+.+|+...-+. ++.
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--i~~----------------------------- 66 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDK--VLL----------------------------- 66 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSE--EEE-----------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccE--EEE-----------------------------
Confidence 4678899999999999999999999998888888777776332110 000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
+.. .. ...-.|.--..+++.++...+++++|||+.+|+.+.+.+|+....
T Consensus 67 ------~~~-----------------~~----~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~ 116 (137)
T 2pr7_A 67 ------SGE-----------------LG----VEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVY 116 (137)
T ss_dssp ------HHH-----------------HS----CCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred ------ecc-----------------CC----CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEE
Confidence 000 00 000011112345666666677899999999999999999985444
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.51 E-value=9.5e-05 Score=75.28 Aligned_cols=116 Identities=22% Similarity=0.229 Sum_probs=81.7
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|++ |++++++|+.+...+....+.+|+...-+.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~---------------------------------- 165 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDA---------------------------------- 165 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSE----------------------------------
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhhe----------------------------------
Confidence 567999999999998 599999999999888888888887432110
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEe------CcccHHHHHHHhhcCCCeEEEEcCC-cccHHhHHhCCc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV------TPSQKAQLVELLKSCDYRTLAIGDG-GNDVRMIQKADI 765 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~------~p~~K~~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~v 765 (826)
.+.++- .|.--..+++.++..++++++|||+ .||+.+-+.||+
T Consensus 166 ------------------------------i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~ 215 (260)
T 2gfh_A 166 ------------------------------IVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGL 215 (260)
T ss_dssp ------------------------------EEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTC
T ss_pred ------------------------------EEecCCCCCCCCCHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCC
Confidence 011111 1111235667777778899999995 999999999999
Q ss_pred --cEEecCCchHH---HHhhccccccchhcchhh
Q 003364 766 --GVGISGREGLQ---AARAADYSIGKFRFLKRL 794 (826)
Q Consensus 766 --gIam~gn~~~~---~~~~Ad~v~~~~~~l~~l 794 (826)
+|++ ...... ....+|+++.++..|..+
T Consensus 216 ~~~i~v-~~~~~~~~~~~~~~~~~i~~~~el~~~ 248 (260)
T 2gfh_A 216 KATVWI-NKSGRVPLTSSPMPHYMVSSVLELPAL 248 (260)
T ss_dssp SEEEEE-CTTCCCCSSCCCCCSEEESSGGGHHHH
T ss_pred ceEEEE-cCCCCCcCcccCCCCEEECCHHHHHHH
Confidence 6777 332211 223688888887776553
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.45 E-value=1.5e-05 Score=77.84 Aligned_cols=45 Identities=7% Similarity=0.062 Sum_probs=36.6
Q ss_pred HHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHh
Q 003364 734 AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR 779 (826)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~ 779 (826)
..+++.++...+++++|||+.||++|.+.||+...+ .+.+..+++
T Consensus 155 ~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~-~~~~~~~~~ 199 (206)
T 2b0c_A 155 QHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSIL-VKDKTTIPD 199 (206)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEE-CCSTTHHHH
T ss_pred HHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEE-ecCCchHHH
Confidence 456777777788999999999999999999999888 565555543
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=97.36 E-value=6.9e-05 Score=74.59 Aligned_cols=101 Identities=12% Similarity=0.069 Sum_probs=70.7
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHH------cCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS------CNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRIT 686 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (826)
++.|++.++++.|++. ++++++|+.+...+..+.+. .|+...
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~------------------------------- 159 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDY------------------------------- 159 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHH-------------------------------
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHh-------------------------------
Confidence 4668999999999999 99999999998887766533 333110
Q ss_pred cCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEE----eCc--ccHHHHHHHhhcCCCeEEEEcCCcccHHhH
Q 003364 687 TSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCR----VTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMI 760 (826)
Q Consensus 687 ~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~----~~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml 760 (826)
|. ..+..+ .-| .-=..+++.++...+++++|||+.||+.|.
T Consensus 160 --------------------------fd-------~i~~~~~~~~~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a 206 (229)
T 4dcc_A 160 --------------------------FE-------KTYLSYEMKMAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVA 206 (229)
T ss_dssp --------------------------CS-------EEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHH
T ss_pred --------------------------CC-------EEEeecccCCCCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHH
Confidence 00 000000 011 112357777777788999999999999999
Q ss_pred HhCCccEEecCCchHHHHh
Q 003364 761 QKADIGVGISGREGLQAAR 779 (826)
Q Consensus 761 ~~A~vgIam~gn~~~~~~~ 779 (826)
+.||++.++ .+.+.++++
T Consensus 207 ~~aG~~~i~-v~~~~~~k~ 224 (229)
T 4dcc_A 207 QELGISTYT-PKAGEDWSH 224 (229)
T ss_dssp HHTTCEEEC-CCTTCCGGG
T ss_pred HHcCCEEEE-ECCHHHHHH
Confidence 999999988 666554443
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00059 Score=65.94 Aligned_cols=35 Identities=17% Similarity=0.308 Sum_probs=30.6
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHH
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a 647 (826)
++.|++.++++.|+++|+++.++||.+...+...+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~ 70 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA 70 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc
Confidence 56799999999999999999999999887775444
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00067 Score=72.43 Aligned_cols=42 Identities=19% Similarity=0.242 Sum_probs=38.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~ 654 (826)
++.|++.++++.|+++|+++.++|+.+...+....+.+|+..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~ 256 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence 567899999999999999999999999999999988988743
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00052 Score=69.24 Aligned_cols=118 Identities=15% Similarity=0.196 Sum_probs=80.1
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
.++.|++.+.++.|++.|+++.++|+.. .+....+.+|+...-+.
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~--------------------------------- 159 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDF--------------------------------- 159 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSE---------------------------------
T ss_pred cccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccce---------------------------------
Confidence 4578999999999999999999988764 35567788887432210
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCc-cEEec
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVGIS 770 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v-gIam~ 770 (826)
++.++ ..-...-.|.-=..+++.++..++++++|||+.+|+.+-+.||+ .|++
T Consensus 160 ----i~~~~---------------------~~~~~KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v- 213 (250)
T 4gib_A 160 ----IADAG---------------------KCKNNKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGV- 213 (250)
T ss_dssp ----ECCGG---------------------GCCSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEE-
T ss_pred ----eeccc---------------------ccCCCCCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEE-
Confidence 00000 00000012222245778888788999999999999999999997 5566
Q ss_pred CCchHHHHhhccccccchhcch
Q 003364 771 GREGLQAARAADYSIGKFRFLK 792 (826)
Q Consensus 771 gn~~~~~~~~Ad~v~~~~~~l~ 792 (826)
++.. +. +.||+++.++..|.
T Consensus 214 ~~~~-~~-~~ad~vi~~l~eL~ 233 (250)
T 4gib_A 214 GNYE-NL-KKANLVVDSTNQLK 233 (250)
T ss_dssp SCTT-TT-TTSSEEESSGGGCC
T ss_pred CChh-Hh-ccCCEEECChHhCC
Confidence 4432 22 35899998887764
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00038 Score=66.02 Aligned_cols=40 Identities=30% Similarity=0.383 Sum_probs=34.1
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCC---------------ChhHHHHHHHHcCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGD---------------KQNTAIQIALSCNF 652 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd---------------~~~~a~~~a~~~gi 652 (826)
++.|++.++|+.|+++|++++++|+. ....+..+.+.+|+
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 96 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGV 96 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCC
Confidence 57899999999999999999999998 45566677777776
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0021 Score=63.80 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=36.5
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi 652 (826)
-++.|++.++++.|+++| ++.++|+.+...+....+.+|+
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 368899999999999999 9999999999888888888886
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0013 Score=65.50 Aligned_cols=85 Identities=14% Similarity=0.161 Sum_probs=63.5
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChh----HHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccc
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQN----TAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRIT 686 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~----~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (826)
..++.|++.+.++.|+++|++++++|||+.. .+..-.+.+|+......
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~---------------------------- 150 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDK---------------------------- 150 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTT----------------------------
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccc----------------------------
Confidence 3578899999999999999999999999764 67777888898432210
Q ss_pred cCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcC-CCeEEEEcCCcccHHh
Q 003364 687 TSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC-DYRTLAIGDGGNDVRM 759 (826)
Q Consensus 687 ~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~m 759 (826)
.++.+-....|....+.+... ...++++||..+|+++
T Consensus 151 ------------------------------------~Lilr~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 151 ------------------------------------TLLLKKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp ------------------------------------TEEEESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred ------------------------------------eeEecCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 122222335677777777763 4568999999999997
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0016 Score=65.04 Aligned_cols=43 Identities=16% Similarity=0.139 Sum_probs=36.8
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChh----HHHHHHHHcCCC
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQN----TAIQIALSCNFI 653 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~----~a~~~a~~~gi~ 653 (826)
..++.|++.+.++.|+++|++++++|||+.. .+..-.+.+|+.
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC
Confidence 4577899999999999999999999999763 667777888884
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0054 Score=61.78 Aligned_cols=44 Identities=18% Similarity=0.282 Sum_probs=33.0
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEc---CCChhHHHHHHHHcCCCC
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFIS 654 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~T---Gd~~~~a~~~a~~~gi~~ 654 (826)
.+..-+++.++++.++++|++++++| |++..........+|+..
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~ 67 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEI 67 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCc
Confidence 44555789999999999999999999 566666666667777643
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0034 Score=63.66 Aligned_cols=120 Identities=13% Similarity=0.189 Sum_probs=77.8
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcC---CCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCN---FISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTS 688 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~g---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 688 (826)
-++.|++.++++.|+++|+++.++|+.+...+..+.+.++ +...-+.
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~------------------------------ 178 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDG------------------------------ 178 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSE------------------------------
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccE------------------------------
Confidence 3678999999999999999999999999887777766443 4211100
Q ss_pred CCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE-
Q 003364 689 EPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV- 767 (826)
Q Consensus 689 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI- 767 (826)
+ +.. .+...-.|.-=..+++.++..++++++|||+.+|+.+-+.||+..
T Consensus 179 ---------------------------i--~~~-~~~~KP~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i 228 (261)
T 1yns_A 179 ---------------------------H--FDT-KIGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVA 228 (261)
T ss_dssp ---------------------------E--ECG-GGCCTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEE
T ss_pred ---------------------------E--Eec-CCCCCCCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEE
Confidence 0 000 000000111113567777777889999999999999999999754
Q ss_pred Eec--CCch-HHHHhhccccccchhcc
Q 003364 768 GIS--GREG-LQAARAADYSIGKFRFL 791 (826)
Q Consensus 768 am~--gn~~-~~~~~~Ad~v~~~~~~l 791 (826)
.+. ++.. +.....+|+++.++..|
T Consensus 229 ~v~~~~~~~~~~~~~~~~~~i~~l~el 255 (261)
T 1yns_A 229 VVVRPGNAGLTDDEKTYYSLITSFSEL 255 (261)
T ss_dssp EECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred EEeCCCCCcccccccCCCEEECCHHHh
Confidence 341 2221 11224578888776655
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0039 Score=62.79 Aligned_cols=42 Identities=12% Similarity=0.196 Sum_probs=34.9
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChh---HHHHHHHHcCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQN---TAIQIALSCNFI 653 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~---~a~~~a~~~gi~ 653 (826)
.++.|++.++|+.|+++|++++++|||+.. .+....+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 467899999999999999999999999944 455556777874
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.17 E-value=0.0037 Score=61.36 Aligned_cols=40 Identities=15% Similarity=0.202 Sum_probs=34.7
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~ 653 (826)
++.|++.++++.|+++|++++++|+.+. .+....+.+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcH
Confidence 5779999999999999999999999866 477788888873
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0056 Score=62.05 Aligned_cols=43 Identities=12% Similarity=0.183 Sum_probs=34.6
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHH----cCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS----CNFIS 654 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~----~gi~~ 654 (826)
+..-+++.++++.+++.|+++.++||+...+...++.. +|+..
T Consensus 20 ~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~ 66 (264)
T 1yv9_A 20 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHV 66 (264)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCC
T ss_pred CEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCC
Confidence 34447889999999999999999999998777766654 77743
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=96.12 E-value=0.0084 Score=62.13 Aligned_cols=96 Identities=15% Similarity=0.112 Sum_probs=64.2
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHH---HHHHHH--------cCCCCCCCCCcEEEecCCCHHHHHHHHHHH
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTA---IQIALS--------CNFISPEPKGQLLSIDGKTEDEVCRSLERV 679 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a---~~~a~~--------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (826)
+.++.|++.++++.|+++|+++.++||++...+ ....+. .|+ .. . .+...+..
T Consensus 186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~-~~-~---~~~~~~~~----------- 249 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV-PL-V---MQCQREQG----------- 249 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC-CC-S---EEEECCTT-----------
T ss_pred ccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC-Cc-h---heeeccCC-----------
Confidence 346789999999999999999999999986533 444445 676 11 1 11110000
Q ss_pred HHHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCe-EEEEcCCcccHH
Q 003364 680 LLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYR-TLAIGDGGNDVR 758 (826)
Q Consensus 680 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~-v~~iGDg~ND~~ 758 (826)
..+-.|.-|..+++.+...... +++|||+.+|+.
T Consensus 250 ---------------------------------------------~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~ 284 (301)
T 1ltq_A 250 ---------------------------------------------DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVE 284 (301)
T ss_dssp ---------------------------------------------CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHH
T ss_pred ---------------------------------------------CCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHH
Confidence 0011233466777777554434 689999999999
Q ss_pred hHHhCCccE
Q 003364 759 MIQKADIGV 767 (826)
Q Consensus 759 ml~~A~vgI 767 (826)
|-+.||+-.
T Consensus 285 ~a~~aG~~~ 293 (301)
T 1ltq_A 285 MWRRIGVEC 293 (301)
T ss_dssp HHHHTTCCE
T ss_pred HHHHcCCeE
Confidence 999999864
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.041 Score=51.94 Aligned_cols=53 Identities=17% Similarity=0.176 Sum_probs=39.4
Q ss_pred EEecCchhhhhhhhhcCCChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcc
Q 003364 521 LLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600 (826)
Q Consensus 521 ~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 600 (826)
-+.-|.++.|....- ..++.+...+..+..+|..++.+| .
T Consensus 133 ~v~iGn~~~m~~~gi--~i~~~~~~~~~~~~~~G~T~V~va--------------------------------------i 172 (185)
T 2kmv_A 133 KVLIGNREWMIRNGL--VINNDVNDFMTEHERKGRTAVLVA--------------------------------------V 172 (185)
T ss_dssp EEEEECHHHHHHHTC--CCCHHHHHHHHHHHHTTCEEEEEE--------------------------------------E
T ss_pred EEEECCHHHHHHcCC--CCCHHHHHHHHHHHhCCCeEEEEE--------------------------------------E
Confidence 455688887755321 223456667788889999999999 5
Q ss_pred CcEEEEEEeeccc
Q 003364 601 DLKVLGVTAIEDR 613 (826)
Q Consensus 601 ~l~~lG~i~~~d~ 613 (826)
|..++|++++.|+
T Consensus 173 dg~l~g~iavaD~ 185 (185)
T 2kmv_A 173 DDELCGLIAIADT 185 (185)
T ss_dssp TTEEEEEEEEECC
T ss_pred CCEEEEEEEEEcC
Confidence 8889999999985
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.66 E-value=0.012 Score=58.68 Aligned_cols=98 Identities=15% Similarity=0.110 Sum_probs=65.8
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
.++.|++.+.++.|+++|+++.++|+... +..+.+.+|+....+.
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~--------------------------------- 138 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTF--------------------------------- 138 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSE---------------------------------
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccccc---------------------------------
Confidence 35789999999999999999999998754 4556777887432110
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc-EEe
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VGI 769 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg-Iam 769 (826)
++.+. ..-...-.|.-=..+++.++..++++++|||+.+|+.+-+.||+- |++
T Consensus 139 ----i~~~~---------------------~~~~~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V 192 (243)
T 4g9b_A 139 ----CADAS---------------------QLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGI 192 (243)
T ss_dssp ----ECCGG---------------------GCSSCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred ----ccccc---------------------cccCCCCcHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEE
Confidence 00000 000000011112357778887889999999999999999999974 455
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=95.54 E-value=0.016 Score=60.39 Aligned_cols=39 Identities=18% Similarity=0.308 Sum_probs=36.3
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHc
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~ 650 (826)
-.+.++.++.++.|+++|++|+|+||-+...+..+|..+
T Consensus 142 ~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 142 PRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 357899999999999999999999999999999999875
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=95.32 E-value=0.018 Score=51.63 Aligned_cols=41 Identities=12% Similarity=0.025 Sum_probs=35.1
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCC---hhHHHHHHHHcCCCC
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDK---QNTAIQIALSCNFIS 654 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~---~~~a~~~a~~~gi~~ 654 (826)
..+++.++|++|+++|++++++|||+ ...+...+.+.|+..
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~ 68 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF 68 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe
Confidence 45789999999999999999999998 566777888888743
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=95.18 E-value=0.02 Score=57.92 Aligned_cols=42 Identities=31% Similarity=0.348 Sum_probs=34.3
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHH---cCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS---CNFI 653 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~---~gi~ 653 (826)
+..-+++.++|++++++|++++++|||+..+...+++. +|+.
T Consensus 16 ~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~ 60 (263)
T 1zjj_A 16 NRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGID 60 (263)
T ss_dssp TEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 33448999999999999999999999998777766665 5664
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=95.14 E-value=0.013 Score=56.97 Aligned_cols=29 Identities=14% Similarity=0.258 Sum_probs=25.5
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCChhH
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQNT 642 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~ 642 (826)
+.+++.++++.|+++|++++++||++...
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~ 117 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTK 117 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCS
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHH
Confidence 35789999999999999999999997543
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=94.24 E-value=0.047 Score=61.44 Aligned_cols=36 Identities=14% Similarity=0.198 Sum_probs=31.1
Q ss_pred HHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 734 AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
..+++.++...+++++|||+.+|+.+.+.||+....
T Consensus 167 ~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~ 202 (555)
T 3i28_A 167 KFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTIL 202 (555)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred HHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEE
Confidence 356777777788999999999999999999997765
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=93.67 E-value=0.066 Score=58.04 Aligned_cols=39 Identities=13% Similarity=0.242 Sum_probs=31.7
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCCh------------hHHHHHHHHcCC
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQ------------NTAIQIALSCNF 652 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~------------~~a~~~a~~~gi 652 (826)
+.|++.++|+.|+++|++++++|+.+. ..+..+.+.+|+
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl 138 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGV 138 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTS
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCC
Confidence 679999999999999999999999761 225566667776
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=93.39 E-value=0.0066 Score=58.22 Aligned_cols=40 Identities=5% Similarity=0.087 Sum_probs=33.9
Q ss_pred ccCCchHHHHHHHHHc-CCeEEEEcCCChhHHHHHHHHcCC
Q 003364 613 RLQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNF 652 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~-Gi~v~i~TGd~~~~a~~~a~~~gi 652 (826)
++.|++.++++.|+++ |+++.++|+.+...+....+.+|+
T Consensus 73 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 73 EPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred ccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 5789999999999999 999999999988776666665553
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=93.06 E-value=0.27 Score=50.03 Aligned_cols=43 Identities=14% Similarity=0.308 Sum_probs=37.2
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcC---CChhHHHHHHHHcCCC
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTG---DKQNTAIQIALSCNFI 653 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TG---d~~~~a~~~a~~~gi~ 653 (826)
.+.+-+++.++|++++++|++++++|| |+........+.+|+.
T Consensus 28 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~ 73 (284)
T 2hx1_A 28 YNGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLF 73 (284)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCT
T ss_pred CCeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcC
Confidence 455678999999999999999999996 7788888888888875
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=92.76 E-value=0.079 Score=53.05 Aligned_cols=34 Identities=12% Similarity=0.137 Sum_probs=29.2
Q ss_pred HHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE
Q 003364 734 AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767 (826)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI 767 (826)
..+++.++..++++++|||+.+|+.+=+.||+-.
T Consensus 194 ~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~ 227 (253)
T 2g80_A 194 ANILRDIGAKASEVLFLSDNPLELDAAAGVGIAT 227 (253)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred HHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEE
Confidence 3567777777889999999999999999999754
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=92.45 E-value=0.0091 Score=57.46 Aligned_cols=40 Identities=8% Similarity=0.052 Sum_probs=33.8
Q ss_pred ccCCchHHHHHHHHHc-CCeEEEEcCCChhHHHHHHHHcCC
Q 003364 613 RLQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNF 652 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~-Gi~v~i~TGd~~~~a~~~a~~~gi 652 (826)
++.|++.++++.|+++ |+++.++|+.+...+....+..|+
T Consensus 75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l 115 (197)
T 1q92_A 75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAW 115 (197)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHH
T ss_pred CcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhch
Confidence 5789999999999999 999999999988766666655554
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=89.92 E-value=4.8 Score=36.83 Aligned_cols=52 Identities=19% Similarity=0.166 Sum_probs=37.0
Q ss_pred EEecCchhhhhhhhhcCCChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcc
Q 003364 521 LLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600 (826)
Q Consensus 521 ~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 600 (826)
.+.-|.++.|....- ..+..+...+..+..+|..++.+| .
T Consensus 114 ~v~iGn~~~m~~~gi--~~~~~~~~~~~~~~~~G~T~v~va--------------------------------------~ 153 (165)
T 2arf_A 114 SVLIGNREWLRRNGL--TISSDVSDAMTDHEMKGQTAILVA--------------------------------------I 153 (165)
T ss_dssp EEEEECHHHHHHHHC--SSCHHHHHHHHHHHTTTSEEEEEE--------------------------------------E
T ss_pred EEEEcCHHHHHhcCC--CCCHHHHHHHHHHHhCCCeEEEEE--------------------------------------E
Confidence 344488887654321 123445566777888999999999 5
Q ss_pred CcEEEEEEeecc
Q 003364 601 DLKVLGVTAIED 612 (826)
Q Consensus 601 ~l~~lG~i~~~d 612 (826)
|..++|++++.|
T Consensus 154 dg~~~g~i~l~D 165 (165)
T 2arf_A 154 DGVLCGMIAIAD 165 (165)
T ss_dssp TTEEEEEEEECC
T ss_pred CCEEEEEEEEEC
Confidence 888999999976
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=89.16 E-value=0.39 Score=42.03 Aligned_cols=30 Identities=17% Similarity=0.159 Sum_probs=26.8
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhH
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNT 642 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~ 642 (826)
.+.+++.+++++++++|++++++|||+...
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMRT 53 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChhh
Confidence 466889999999999999999999998754
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.05 E-value=0.2 Score=47.67 Aligned_cols=41 Identities=12% Similarity=-0.001 Sum_probs=37.9
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~ 653 (826)
-.+||++.+.++.+++. ++++++|.-....|..+.+.+++.
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~ 107 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRW 107 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCS
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCc
Confidence 46799999999999998 999999999999999999999873
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=86.30 E-value=0.65 Score=43.30 Aligned_cols=25 Identities=12% Similarity=0.288 Sum_probs=23.0
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGD 638 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd 638 (826)
++.|++.++++.|++. +++.++|+.
T Consensus 69 ~~~pg~~e~L~~L~~~-~~~~i~T~~ 93 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNEH-YDIYIATAA 93 (180)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEECC
T ss_pred CCCcCHHHHHHHHHhc-CCEEEEeCC
Confidence 5789999999999984 999999998
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=85.58 E-value=0.3 Score=45.87 Aligned_cols=41 Identities=12% Similarity=-0.004 Sum_probs=37.8
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~ 653 (826)
-..||++.+.++.+.+. +++++.|.-+...|..+.+.++..
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~ 94 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKW 94 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTT
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCC
Confidence 46799999999999998 999999999999999999999863
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=84.35 E-value=0.27 Score=50.52 Aligned_cols=33 Identities=24% Similarity=0.286 Sum_probs=24.5
Q ss_pred Cccccccccccccc---------ccceEEEecCCcccccceee
Q 003364 359 TPSHATNTAISEDL---------AQVEYILTDKTGTLTENRMI 392 (826)
Q Consensus 359 ~~i~~~~~~~~e~l---------g~v~~i~~DKTGTLT~~~~~ 392 (826)
.++++|++..+|.+ .++. ++||||||||+....
T Consensus 19 ~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~~ 60 (297)
T 4fe3_A 19 SSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSYN 60 (297)
T ss_dssp TTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEET
T ss_pred CCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeeccC
Confidence 35889999988873 2343 677999999986543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 826 | ||||
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 2e-25 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 5e-22 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 1e-15 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 4e-13 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 3e-06 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 5e-06 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 5e-06 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 5e-05 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 2e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 0.001 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 0.002 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 0.002 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 0.004 |
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 107 bits (267), Expect = 2e-25
Identities = 53/447 (11%), Positives = 107/447 (23%), Gaps = 106/447 (23%)
Query: 363 ATNTAISEDLAQVEY------ILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGL 416
+ + E L Y I + + R IF ++ + LK
Sbjct: 21 VSALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRNR------IFQKDKILNKLK---- 70
Query: 417 LNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNK 476
+ G L ++ + + IL K + EA ++
Sbjct: 71 ----SLGLNSNWDMLFIVFSIHLI--------DILKKLSHDEIEAFMYQDE--------- 109
Query: 477 NASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA 536
+E+K L + + V + + L + A + +
Sbjct: 110 ---PVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKN-NIYAALEEFATTELHV---S 162
Query: 537 GQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQ 596
+ A+ +Q + L + E+ E + FK +
Sbjct: 163 DATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPV----- 217
Query: 597 RLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE 656
D V + L+ AG + TG + + +
Sbjct: 218 -------------------DEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYF 258
Query: 657 PKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTEL 716
+ + V++ + + K
Sbjct: 259 EADFIATASD-----------------------------VLEAENMYPQARPLGKPNPF- 288
Query: 717 AILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKAD---IGV--GISG 771
+ + +GD D+ QK IG G+ G
Sbjct: 289 -SYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKG 347
Query: 772 REGLQ--AARAADYSIGKFRFLKRLIL 796
++ A ADY I L+ ++
Sbjct: 348 KDAAGELEAHHADYVINHLGELRGVLD 374
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 93.8 bits (232), Expect = 5e-22
Identities = 47/252 (18%), Positives = 77/252 (30%), Gaps = 42/252 (16%)
Query: 380 TDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNT 439
DK + F I G Y E G+ LK+ + + ++ T+ A+CN
Sbjct: 9 IDKVDGDFCSLNEFS---ITGSTYAPE-GEVLKNDKPIRS--GQFDGLVELATICALCND 62
Query: 440 VIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVL----QYEIL 495
++ + K E AL ++++ + N +
Sbjct: 63 SSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKE 122
Query: 496 ETLEFTSDRKRMSVVVK----DCHSGNISLLSKGADEAILP---YAHAGQQTRTFVEAVE 548
TLEF+ DRK MSV + + KGA E ++ Y G V+
Sbjct: 123 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVK 182
Query: 549 Q----------YSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRL 598
+ + LR L LA R+ +
Sbjct: 183 EKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFME---------------Y 227
Query: 599 EHDLKVLGVTAI 610
E DL +GV +
Sbjct: 228 ETDLTFVGVVGM 239
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 74.5 bits (182), Expect = 1e-15
Identities = 28/204 (13%), Positives = 57/204 (27%), Gaps = 41/204 (20%)
Query: 424 SPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQ---SQDEEALVHAAAQLHMVLVNKNASI 480
SP + +CN + + + K E AL+ S+
Sbjct: 31 SPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCG-------SV 83
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKD-CHSGNISLLSKGADEAILPYA----- 534
+++ + + + F S K + + + + L+ KGA E IL
Sbjct: 84 RKMRD-----RNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILV 138
Query: 535 ------HAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDRE 588
+ F A + LG R L + ++ + +
Sbjct: 139 QGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNF----- 193
Query: 589 WRIAEVCQRLEHDLKVLGVTAIED 612
L +G+ ++ D
Sbjct: 194 ---------PTEKLCFVGLMSMID 208
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 66.0 bits (160), Expect = 4e-13
Identities = 44/191 (23%), Positives = 69/191 (36%), Gaps = 41/191 (21%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
D T D + V +I+ R AGI M+TGD + TAI I +
Sbjct: 8 DKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA 67
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
+ G+ D++ + +R
Sbjct: 68 DRAYTGREFDDLPLAEQREACRR------------------------------------- 90
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR- 779
RV PS K+++VE L+S D T GDG ND ++KA+IG+ + G A+
Sbjct: 91 -ACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGS--GTAVAKT 147
Query: 780 AADYSIGKFRF 790
A++ + F
Sbjct: 148 ASEMVLADDNF 158
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.8 bits (110), Expect = 3e-06
Identities = 19/96 (19%), Positives = 30/96 (31%), Gaps = 3/96 (3%)
Query: 699 GWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL--KSCDYRTLAIGDGGND 756
+ K + K ++++LL K + + IGDG D
Sbjct: 120 NIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATD 179
Query: 757 VRMIQKADIGVGISGREGL-QAARAADYSIGKFRFL 791
+ AD +G G Q A + I F L
Sbjct: 180 MEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 44.7 bits (105), Expect = 5e-06
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQN 641
D D L++ ++ L++ GI M+TGD
Sbjct: 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWR 49
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 46.2 bits (108), Expect = 5e-06
Identities = 26/192 (13%), Positives = 56/192 (29%), Gaps = 21/192 (10%)
Query: 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTED 670
+ + E I GI ++TG+ A ++ P +I K +
Sbjct: 17 NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76
Query: 671 EVCRS-----------LERVLLTMRITTSEPKDVAFVVDGWALEI-ALKHYRKAFTELAI 718
S +R T + V+ + + ++ +
Sbjct: 77 IFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLV 136
Query: 719 LSRTAICCRVTPSQKAQLVELLKSCDY------RTLAIGDGGNDVRMIQKADIGVGIS-G 771
+ V + + K+ ++ +GDG ND+ + V ++
Sbjct: 137 AVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQA 196
Query: 772 REGLQAARAADY 783
+ L+ ADY
Sbjct: 197 PKILKE--NADY 206
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 43.0 bits (100), Expect = 5e-05
Identities = 30/210 (14%), Positives = 63/210 (30%), Gaps = 25/210 (11%)
Query: 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP---EPKGQLLSIDGK 667
+ + E+I + K G+ +L+G+ + + P E G + DG
Sbjct: 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGS 77
Query: 668 TEDEVCRSLERVLLT-------MRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
+ L MR + A E ++A + ++
Sbjct: 78 IKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIF 137
Query: 721 RTAICCRVTPSQKAQLVELLKSCDY------RTLAIGDGGNDVRMIQKADIGVGIS-GRE 773
+ + + + + K + L IGD ND+ M Q + +
Sbjct: 138 YSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATD 197
Query: 774 GLQAARAADYSI------GKFRFLKRLILV 797
++A +D+ + K L+
Sbjct: 198 NIKA--VSDFVSDYSYGEEIGQIFKHFELM 225
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 41.0 bits (95), Expect = 2e-04
Identities = 23/110 (20%), Positives = 35/110 (31%)
Query: 695 FVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGG 754
++ E+ R K Q V KS YR +A GD
Sbjct: 96 EFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSY 155
Query: 755 NDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYN 804
ND M+ +A G+ E + ++ + LKR L S +
Sbjct: 156 NDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFLKASSRSLS 205
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 39.1 bits (90), Expect = 0.001
Identities = 34/204 (16%), Positives = 71/204 (34%), Gaps = 25/204 (12%)
Query: 615 QDGVPETIETLRKAGINFWMLTGD-----KQNTAIQIALSCNFISPEPKGQLLSIDGKTE 669
+ + + L + + TG + + F S P+ L + E
Sbjct: 84 KKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAE 143
Query: 670 DEVCRSLERVLLTMR--ITTSEPKDVAFVVDGWALEIALKHYRKAFT---ELAILSRTAI 724
+ +S + + + EP D ++ + L+ K + +L ++S
Sbjct: 144 VQYSQSGFAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEH 203
Query: 725 CCRVTPSQKAQLVELLKSCDY------RTLAIGDGGNDVRMIQKADIGVGIS-GREGLQA 777
++ + ++ L + T A+GD ND M++ A GV + RE +++
Sbjct: 204 NFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKS 263
Query: 778 ARAADYSI------GKFRFLKRLI 795
AD G +K L+
Sbjct: 264 --IADAVTLTNDEHGVAHMMKHLL 285
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 38.2 bits (87), Expect = 0.002
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 746 RTLAIGDGGNDVRMIQKADIGVGISG 771
TL +GDG ND +++ D V + G
Sbjct: 205 TTLGLGDGPNDAPLLEVMDYAVIVKG 230
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 37.9 bits (86), Expect = 0.002
Identities = 24/171 (14%), Positives = 56/171 (32%), Gaps = 4/171 (2%)
Query: 617 GVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEV--CR 674
GV E ++ + K + + + + E + ++ E+ + +
Sbjct: 29 GVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVEKAIKRITPTEGAEETIKELK 88
Query: 675 SLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKA 734
+ V+ + + G A + K + +
Sbjct: 89 NRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILE 148
Query: 735 QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 785
++ ++ T+A+GDG ND+ M +KA + + + L+ AD I
Sbjct: 149 KIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFCAKPILKE--KADICI 197
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 37.7 bits (86), Expect = 0.004
Identities = 11/73 (15%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Query: 724 ICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI-SGREGLQAARAAD 782
C K ++ L + + IGD DV + +D+ +
Sbjct: 141 TCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNH 200
Query: 783 YSIGKFRFLKRLI 795
F +++ I
Sbjct: 201 LPYQDFYEIRKEI 213
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 826 | |||
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.9 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.89 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.89 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.86 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.86 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.82 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.57 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.57 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.52 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.5 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.49 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.47 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.45 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.42 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.33 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.3 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.26 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.23 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.18 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.14 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.88 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.87 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.87 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.84 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.74 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.58 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.89 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.86 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.84 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.51 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.51 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.5 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 97.46 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 97.33 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.3 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 97.28 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 97.26 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 97.26 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.18 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 97.11 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.88 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 96.79 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.73 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 96.68 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 96.59 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 96.54 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.43 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 96.38 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 96.19 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 95.82 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 95.73 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 94.36 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 94.32 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 93.65 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 93.6 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 92.19 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 91.98 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 84.57 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 80.28 |
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.90 E-value=1.6e-24 Score=186.03 Aligned_cols=109 Identities=24% Similarity=0.293 Sum_probs=90.6
Q ss_pred EEEEEeCCeE--EEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeeeccccccCCCHhhh
Q 003364 102 EVWVVKQGIK--KLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELL 179 (826)
Q Consensus 102 ~~~V~r~g~~--~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~~~~~~~~~~~~~~ 179 (826)
.++|+|+|++ ++|++++|+|||||.|++|+++||||+|+... .+.+.||||+|||||.|+.|.+.+.
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~--~~~l~vdes~lTGEs~pv~K~~~~~--------- 70 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIK--STTLRVDQSILTGESVSVIKHTEPV--------- 70 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEC--SSCCEEECHHHHSCCSCEECCCSCC---------
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEee--ccceEEEEeecccceEEEEeecccc---------
Confidence 5789999985 78999999999999999999999999999543 2448999999999999999964321
Q ss_pred ccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcceeeccC
Q 003364 180 HKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTR 251 (826)
Q Consensus 180 ~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T~~~~~~ 251 (826)
.+.........|++|+||.+.+| .++++|++||.+|.+|++.
T Consensus 71 -----------------------------~~~~~~~~~~~n~lf~GT~V~~G-~~~~~V~~tG~~T~~G~i~ 112 (115)
T d1wpga1 71 -----------------------------PDPRAVNQDKKNMLFSGTNIAAG-KALGIVATTGVSTEIGKIR 112 (115)
T ss_dssp -----------------------------CCTTCCGGGCTTEECTTCEEEEC-EEEEEEEECGGGSHHHHHH
T ss_pred -----------------------------cccccccccccceEEeccEEEee-eEEEEEEEEccccHHHHHH
Confidence 01112223567999999999999 7999999999999998753
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.89 E-value=4.6e-25 Score=216.68 Aligned_cols=197 Identities=15% Similarity=0.140 Sum_probs=135.0
Q ss_pred eeEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCc---eeeecCCccHHHHHHHHH
Q 003364 391 MIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGA---ILYKAQSQDEEALVHAAA 467 (826)
Q Consensus 391 ~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~---~~~~~~~~~e~all~~a~ 467 (826)
|+|+++|.++..|..+...... .......++.+..++.++++||++....++++. -....|+|+|.||+.+|.
T Consensus 2 MTV~~~w~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~ 77 (214)
T d1q3ia_ 2 MTVAHMWFDNQIHEADTTEDQS----GATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIE 77 (214)
T ss_dssp CEEEEEEETTEEEECCCC----------CCCCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHH
T ss_pred eEEEEEEECCEEEEcCCCCcCC----CcccccCCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHH
Confidence 8999999999887544221111 111233456778899999999998765443221 112368999999999998
Q ss_pred hCCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecC-CCeEEEEecCchhhhhhhhhc----------
Q 003364 468 QLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCH-SGNISLLSKGADEAILPYAHA---------- 536 (826)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~-~~~~~~~~KGa~e~i~~~~~~---------- 536 (826)
+.|.... ..+..+.++..+||+|.+|||+++++... ++.+++|+|||||.|+++|+.
T Consensus 78 ~~~~~~~------------~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~l 145 (214)
T d1q3ia_ 78 LSCGSVR------------KMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIPL 145 (214)
T ss_dssp HHHSCHH------------HHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEEC
T ss_pred HhCCCHH------------HHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceeec
Confidence 7665321 12334677899999999999999999753 467899999999999999972
Q ss_pred -CCChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccC
Q 003364 537 -GQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQ 615 (826)
Q Consensus 537 -~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~ 615 (826)
...++.+.+.+++|+.+|+|||++|||.++.++++.+... +. ...+..|+||+|+|++|+.||+|
T Consensus 146 ~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~---------~~-----~~~~~~e~~L~flGlvgi~DPPR 211 (214)
T d1q3ia_ 146 DKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKF---------DT-----DELNFPTEKLCFVGLMSMIDHHH 211 (214)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCC---------CT-----TTTSSCCSSEEEEEEEEEESCCS
T ss_pred hHHHHHHHHHHHHHHhhCCcEEEEEEEEecCcccccccccc---------Ch-----hhhhhhcCCCEEEEEEEEEeCCC
Confidence 2235678999999999999999999999988765432110 00 00134578999999999999999
Q ss_pred Cc
Q 003364 616 DG 617 (826)
Q Consensus 616 ~~ 617 (826)
+.
T Consensus 212 ~~ 213 (214)
T d1q3ia_ 212 HH 213 (214)
T ss_dssp CC
T ss_pred CC
Confidence 74
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.89 E-value=5.8e-24 Score=198.03 Aligned_cols=138 Identities=29% Similarity=0.377 Sum_probs=108.9
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCC
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (826)
-||+|++++++|+.|+++||++||+|||+..+|..+|+++||..++......
T Consensus 18 ~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~---------------------------- 69 (168)
T d1wpga2 18 LDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR---------------------------- 69 (168)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTT----------------------------
T ss_pred cCCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccc----------------------------
Confidence 3999999999999999999999999999999999999999998765431100
Q ss_pred CceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEec
Q 003364 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (826)
Q Consensus 691 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~ 770 (826)
...+..+........+. ......+|+|++|++|..+++.++..++.|+|+|||.||++||+.||+||||
T Consensus 70 -----~~~~~~~~~~~~~~~~~-----~~~~~~v~ar~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~- 138 (168)
T d1wpga2 70 -----AYTGREFDDLPLAEQRE-----ACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM- 138 (168)
T ss_dssp -----EEEHHHHHHSCHHHHHH-----HHHHCCEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE-
T ss_pred -----cccccccchhhHHHHhh-----hhhhhhhhhccchhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEe-
Confidence 11122221111111110 1233678999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHhhccccccc
Q 003364 771 GREGLQAARAADYSIGK 787 (826)
Q Consensus 771 gn~~~~~~~~Ad~v~~~ 787 (826)
+++.+.++++||+++.+
T Consensus 139 ~~gt~~a~~aAdivl~~ 155 (168)
T d1wpga2 139 GSGTAVAKTASEMVLAD 155 (168)
T ss_dssp TTSCHHHHHTCSEEETT
T ss_pred ccccHHHHHhCCEEEcc
Confidence 77666667799999855
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.86 E-value=1.8e-22 Score=179.82 Aligned_cols=116 Identities=26% Similarity=0.369 Sum_probs=99.0
Q ss_pred CcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHH
Q 003364 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVL 680 (826)
Q Consensus 601 ~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (826)
|.+..+.++++|++|++++++|+.|+++|++++|+|||+..++..+|+++||
T Consensus 9 d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI---------------------------- 60 (135)
T d2b8ea1 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL---------------------------- 60 (135)
T ss_dssp ECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTC----------------------------
T ss_pred CCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhh----------------------------
Confidence 4455668999999999999999999999999999999999999999999998
Q ss_pred HHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhH
Q 003364 681 LTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMI 760 (826)
Q Consensus 681 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml 760 (826)
..++++++|++|..+++.++.. +.|+|+|||.||+|||
T Consensus 61 -----------------------------------------~~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL 98 (135)
T d2b8ea1 61 -----------------------------------------DLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPAL 98 (135)
T ss_dssp -----------------------------------------SEEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHH
T ss_pred -----------------------------------------hhhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHH
Confidence 3577899999999999999865 6899999999999999
Q ss_pred HhCCccEEecCCchHHHHhhccccccc
Q 003364 761 QKADIGVGISGREGLQAARAADYSIGK 787 (826)
Q Consensus 761 ~~A~vgIam~gn~~~~~~~~Ad~v~~~ 787 (826)
+.||+|||| +++.+.++.+||+++.+
T Consensus 99 ~~Advgia~-~~~~~~~~~aADivl~~ 124 (135)
T d2b8ea1 99 AQADLGIAV-GSGSDVAVESGDIVLIR 124 (135)
T ss_dssp HHSSEEEEE-CCC--------SEEESS
T ss_pred HhCCeeeec-CccCHHHHHhCCEEEEC
Confidence 999999999 77776677799999955
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.86 E-value=5.6e-27 Score=251.95 Aligned_cols=332 Identities=14% Similarity=0.025 Sum_probs=211.0
Q ss_pred ccccccccceEEEecCCcccccceeeEEEEEEcCeeecCCCCCcccchhhhhhhc-cCCchHHHHHHHhhhceeeecccC
Q 003364 367 AISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAIT-SGSPDVIRFLTVMAVCNTVIPAKS 445 (826)
Q Consensus 367 ~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~c~~~~~~~~ 445 (826)
...|.||...++|+|||||+|.+.|.+..+. ..+.+.... ..-++-.++..+.++|+.+....
T Consensus 31 ~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~---------------~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~- 94 (380)
T d1qyia_ 31 MDKCYLGLHSHIDWETLTDNDIQDIRNRIFQ---------------KDKILNKLKSLGLNSNWDMLFIVFSIHLIDILK- 94 (380)
T ss_dssp HCTTTTCCSCCCCGGGCCHHHHHHHHHHHHT---------------TTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHT-
T ss_pred hchhhcccceeeecCcccchhhhhheeeeec---------------chhhhHhhhhcCCChhHHHHHHHHHHHHHHHHh-
Confidence 3458899999999999999999999764321 011111111 11112234555666677543221
Q ss_pred CCCceeeecCCccHHHHHHHHHhCCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecC
Q 003364 446 KAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKG 525 (826)
Q Consensus 446 ~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KG 525 (826)
..+++.+.+++...+..+... ......+.....+||++.+++|++..... ++.+..+.+|
T Consensus 95 -------~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~i~f~~~~k~~~~~~~~~-~~~~~~~~~~ 154 (380)
T d1qyia_ 95 -------KLSHDEIEAFMYQDEPVELKL------------QNISTNLADCFNLNEQLPLQFLDNVKVGK-NNIYAALEEF 154 (380)
T ss_dssp -------TSCHHHHHHHHHCSSCHHHHH------------TTSGGGCSSCCCCCTTTTHHHHTTCCSSH-HHHHHHHHHH
T ss_pred -------hcCCCcHHHHHHHHhhccchH------------HHHHHhccccccCCcchHHHHHhhhcccc-cchhHhhhhc
Confidence 135677777776543222111 11112233445789999999998865432 3344555667
Q ss_pred chhhhhhhhhcCCChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEE
Q 003364 526 ADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVL 605 (826)
Q Consensus 526 a~e~i~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~l 605 (826)
+++.+... ......+...+..++.+|+|++++|++..+..+ .....+....
T Consensus 155 a~~~~~~~---~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~--------------------------~~~~~~~~~~ 205 (380)
T d1qyia_ 155 ATTELHVS---DATLFSLKGALWTLAQEVYQEWYLGSKLYEDVE--------------------------KKIARTTFKT 205 (380)
T ss_dssp HHHHTTCS---CCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHH--------------------------CSCCSCSSCC
T ss_pred cHhhcCCc---HHHHHHHHhHHHHHHHHHHHHHHHhhhcccccc--------------------------cccchhhHhc
Confidence 77655332 233455677888999999999998865433211 2233456677
Q ss_pred EEEeeccccCC--chHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHc
Q 003364 606 GVTAIEDRLQD--GVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTM 683 (826)
Q Consensus 606 G~i~~~d~l~~--~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (826)
|++..+++++| +++++|++|+++|++++|+|||+..+|..+++++|+........++. + ++..... ...
T Consensus 206 g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~--~---~d~~~~~----~~~ 276 (380)
T d1qyia_ 206 GYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIAT--A---SDVLEAE----NMY 276 (380)
T ss_dssp CTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEEC--H---HHHHHHH----HHS
T ss_pred ccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEe--c---chhhhhh----hhc
Confidence 99999998766 99999999999999999999999999999999999865322111110 0 0000000 000
Q ss_pred ccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhC
Q 003364 684 RITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKA 763 (826)
Q Consensus 684 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A 763 (826)
.......++ .-..+.....+++.+|.+|..+++.++..++.|+|+|||.||++|++.|
T Consensus 277 ~~~~~~~KP----------------------~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~A 334 (380)
T d1qyia_ 277 PQARPLGKP----------------------NPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKI 334 (380)
T ss_dssp TTSCCCCTT----------------------STHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHH
T ss_pred cccccccCC----------------------ChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHC
Confidence 000000000 0000011223457789999999999999999999999999999999999
Q ss_pred C---ccEEecCCchHH----HHh-hccccccchhcchhhe
Q 003364 764 D---IGVGISGREGLQ----AAR-AADYSIGKFRFLKRLI 795 (826)
Q Consensus 764 ~---vgIam~gn~~~~----~~~-~Ad~v~~~~~~l~~l~ 795 (826)
| +||+| |..+++ +.+ .||+++.++..|.+++
T Consensus 335 g~~~Igv~~-G~~g~~~~~el~~~~AD~ii~~~~el~~il 373 (380)
T d1qyia_ 335 GATFIGTLT-GLKGKDAAGELEAHHADYVINHLGELRGVL 373 (380)
T ss_dssp TCEEEEESC-BTTBGGGHHHHHHTTCSEEESSGGGHHHHH
T ss_pred CCCEEEEec-CCCCcccHHHHHhCCCCEEECCHHHHHHHH
Confidence 9 99999 655443 333 6999999998887754
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.82 E-value=2.5e-21 Score=193.44 Aligned_cols=214 Identities=21% Similarity=0.240 Sum_probs=138.2
Q ss_pred eEEEecCCcccccceeeEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecC
Q 003364 376 EYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQ 455 (826)
Q Consensus 376 ~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~ 455 (826)
...+.||++..| +...++.+.+..|.++ +......+.. .....+.+..++.++++||++....++.+..+...|
T Consensus 5 ~m~v~~~~~~~~---~~~~~~~VtG~~y~p~-G~i~~~~~~v--~~~~~~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G 78 (239)
T d1wpga3 5 KMFIIDKVDGDF---CSLNEFSITGSTYAPE-GEVLKNDKPI--RSGQFDGLVELATICALCNDSSLDFNETKGVYEKVG 78 (239)
T ss_dssp EEEEEEEEETTE---EEEEEEEECCSSSSSC-CCEEETTEEC--CGGGCHHHHHHHHHHHHSCSCEEEEETTTTEEEEES
T ss_pred EEEEEeeecCCc---ccceEEEEEeEeeCCc-eEEEECCcCc--CccccHHHHHHHHHHHhcCCCEeeecCCCCeEEEcC
Confidence 345667764433 3444555555555442 1111111110 112345678899999999998766554444556679
Q ss_pred CccHHHHHHHHHhCCeEEEeecCceEE----EEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCC----eEEEEecCch
Q 003364 456 SQDEEALVHAAAQLHMVLVNKNASILE----IKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSG----NISLLSKGAD 527 (826)
Q Consensus 456 ~~~e~all~~a~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~----~~~~~~KGa~ 527 (826)
+|+|.||+.++.+.|+........... ......+..|.++..+||+|+||||+|+++.++++ .+++|+||||
T Consensus 79 ~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGAp 158 (239)
T d1wpga3 79 EATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAP 158 (239)
T ss_dssp CHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECH
T ss_pred CCCcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCCh
Confidence 999999999999988643221110000 00000134688999999999999999999986433 4789999999
Q ss_pred hhhhhhhhc-----------CCChhHHHHHHHHH--HHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q 003364 528 EAILPYAHA-----------GQQTRTFVEAVEQY--SQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEV 594 (826)
Q Consensus 528 e~i~~~~~~-----------~~~~~~~~~~~~~~--~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (826)
|.|+++|+. ...++.+.+.+.++ +.+|+|||++|||.++.++...+. .+. ..
T Consensus 159 e~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~k~~~~~~~~~~~-------~~~--------~~ 223 (239)
T d1wpga3 159 EGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVL-------DDS--------SR 223 (239)
T ss_dssp HHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEEESSCCCGGGCCT-------TCG--------GG
T ss_pred HHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEEEECCcccccccc-------cch--------hh
Confidence 999999973 12234566667766 679999999999999865422110 000 01
Q ss_pred HHHhccCcEEEEEEee
Q 003364 595 CQRLEHDLKVLGVTAI 610 (826)
Q Consensus 595 ~~~~e~~l~~lG~i~~ 610 (826)
.+.+|+||+|+|++|+
T Consensus 224 ~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 224 FMEYETDLTFVGVVGM 239 (239)
T ss_dssp HHHHTCSEEEEEEEEE
T ss_pred HHHhcCCCEEEEEECC
Confidence 2567899999999986
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.57 E-value=1.3e-14 Score=149.32 Aligned_cols=176 Identities=15% Similarity=0.113 Sum_probs=111.3
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCC--------cEEEecCCCHHHHHHHHHHHHH
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKG--------QLLSIDGKTEDEVCRSLERVLL 681 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 681 (826)
..+++.+.++|++|+++|++++++|||++..+..+++++++..+ ..+| .++.......+.....+....+
T Consensus 17 ~~i~~~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nG~~i~~~~~~~i~~~~i~~~~~~~i~~~~~~ 96 (285)
T d1nrwa_ 17 HQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRLYHHETIDKKRAYDILSWLES 96 (285)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCEEEECCCCHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCcEEEecCceeEEecCCceeeeccCCHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999997543 1112 2222222222222211111110
Q ss_pred Hc--------------------------------------------------------------ccccCCCCceEEEEcC
Q 003364 682 TM--------------------------------------------------------------RITTSEPKDVAFVVDG 699 (826)
Q Consensus 682 ~~--------------------------------------------------------------~~~~~~~~~~~l~~~g 699 (826)
.- ...........+....
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (285)
T d1nrwa_ 97 ENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFS 176 (285)
T ss_dssp TTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCEEECSCGGGGTSSSSCCCEEEEEEEC
T ss_pred cCCceEEecCceEEeccccHHHHHHHHHhhhhcCcccchhhhhhhhhhhhccccceeechHHHHhhcccchhheeeeccc
Confidence 00 0000001111122222
Q ss_pred hhHHHHHHHHHHH--HhhhccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecC
Q 003364 700 WALEIALKHYRKA--FTELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISG 771 (826)
Q Consensus 700 ~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~g 771 (826)
...+......... ...+........+.+++|. +|+..++.+.+ ..++|++||||.||++||+.||+|||| +
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~ldi~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam-~ 255 (285)
T d1nrwa_ 177 FFKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAM-G 255 (285)
T ss_dssp SCHHHHHHHHHHHTTCTTEEEECSSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEEC-T
T ss_pred chHHHHHHHHHHhhcCCCeEEEEeCCcEEEEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEe-C
Confidence 2222222211111 1223333445567789997 69887777765 457899999999999999999999999 9
Q ss_pred CchHHHHhhccccccch
Q 003364 772 REGLQAARAADYSIGKF 788 (826)
Q Consensus 772 n~~~~~~~~Ad~v~~~~ 788 (826)
|+.+++++.||+++.++
T Consensus 256 na~~~~k~~A~~v~~~~ 272 (285)
T d1nrwa_ 256 NAREDIKSIADAVTLTN 272 (285)
T ss_dssp TCCHHHHHHCSEECCCG
T ss_pred CCCHHHHHhCCEEcCCC
Confidence 99999999999999765
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.57 E-value=7.5e-15 Score=149.99 Aligned_cols=177 Identities=18% Similarity=0.187 Sum_probs=114.3
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCC-----CCcEEE---------ecCCCHHHHHHHH
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP-----KGQLLS---------IDGKTEDEVCRSL 676 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~-----~~~~~~---------~~~~~~~~~~~~~ 676 (826)
...+++.+.++|++|+++|++++++|||++..+..+.+++++..+.. +|..+. ......+......
T Consensus 19 ~~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~ 98 (271)
T d1rkqa_ 19 DHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLE 98 (271)
T ss_dssp TSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHH
Confidence 34688999999999999999999999999999999999999876532 232222 1111222222221
Q ss_pred HHHHHHcc---cc------------------------------------cCCCCceEEEEcCh-hHHHHHHHHHHHHhh-
Q 003364 677 ERVLLTMR---IT------------------------------------TSEPKDVAFVVDGW-ALEIALKHYRKAFTE- 715 (826)
Q Consensus 677 ~~~~~~~~---~~------------------------------------~~~~~~~~l~~~g~-~~~~~~~~~~~~~~~- 715 (826)
........ .. .............. ......+.+.+.+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 178 (271)
T d1rkqa_ 99 KLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEK 178 (271)
T ss_dssp HHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHH
T ss_pred HHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcc
Confidence 11111100 00 00011112222222 223333333333322
Q ss_pred hccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 716 LAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 716 ~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
.........+.++.|. +|+..++.+.+ ..+++++||||.||++||+.|++|||| +|+.+++++.|++++.++
T Consensus 179 ~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am-~na~~~lk~~a~~i~~~~ 256 (271)
T d1rkqa_ 179 YTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV-DNAIPSVKEVANFVTKSN 256 (271)
T ss_dssp EEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCSEECCCT
T ss_pred eEEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEe-CCCCHHHHHhCCEEcCCC
Confidence 2233334456788887 69988877755 456899999999999999999999999 999999999999999765
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.52 E-value=1.1e-14 Score=148.47 Aligned_cols=173 Identities=17% Similarity=0.220 Sum_probs=111.8
Q ss_pred CCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEecC-------CCHHHHHHHHHHHHHHccc
Q 003364 615 QDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDG-------KTEDEVCRSLERVLLTMRI 685 (826)
Q Consensus 615 ~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 685 (826)
.|.+.++|++|+++|++++++|||+...+..+++++++..+ ..+|..+..++ ....+....+.........
T Consensus 22 ~~~~~~~l~~l~~~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 101 (269)
T d1rlma_ 22 QPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQL 101 (269)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHTCTTC
T ss_pred hHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcccceEeeceeEEEECCcEEEEeccchHHHHHHHHHHHhhcCc
Confidence 46799999999999999999999999999999988886543 12233333322 2223333333322221000
Q ss_pred c------------------------------------cC-CCC--ceEEEEcChhHHHHHHHHHHHHhh-hccccceeEE
Q 003364 686 T------------------------------------TS-EPK--DVAFVVDGWALEIALKHYRKAFTE-LAILSRTAIC 725 (826)
Q Consensus 686 ~------------------------------------~~-~~~--~~~l~~~g~~~~~~~~~~~~~~~~-~~~~~~~~i~ 725 (826)
. .. ... ...+...........+.+...+.. ...+.....+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (269)
T d1rlma_ 102 NFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGFGF 181 (269)
T ss_dssp EEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEECCGGGHHHHHHHHHHHTTTSSEEEECSTTE
T ss_pred eEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhhcchheEEEecCCHHHHHHHHHHHHHHhhcceEEEEEcCce
Confidence 0 00 000 111112222333344444443332 2233334556
Q ss_pred EEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 726 CRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 726 ~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
.+++|. +|+..++.|.+ ..++|++||||.||++||+.||+|||| +|+.+++|+.|++|+.++
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam-~Na~~~lk~~A~~v~~~~ 249 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAM-GNAAENIKQIARYATDDN 249 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEC-TTCCHHHHHHCSEECCCG
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEe-CCCCHHHHHhCCEEcCCC
Confidence 789987 59987777654 457899999999999999999999999 999999999999999765
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.50 E-value=1.4e-15 Score=154.43 Aligned_cols=172 Identities=19% Similarity=0.216 Sum_probs=104.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC----CCCCcEEEecCC-------CHHHHHHHHHHHHH
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP----EPKGQLLSIDGK-------TEDEVCRSLERVLL 681 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~----~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 681 (826)
.+++.+.++|++|+++|++++++|||+...+..++...++... ..+|..+..+++ ..+......+ ...
T Consensus 19 ~i~~~~~~al~~l~~~gi~v~~~TGR~~~~~~~l~~~~~~~~~~~~I~~nGa~i~~~~~~i~~~~l~~~~~~~i~~-~~~ 97 (260)
T d2rbka1 19 RIPSSTIEALEAAHAKGLKIFIATGRPKAIINNLSELQDRNLIDGYITMNGAYCFVGEEVIYKSAIPQEEVKAMAA-FCE 97 (260)
T ss_dssp SCCHHHHHHHHHHHHTTCEEEEECSSCGGGCCSCHHHHHTTCCCEEEEGGGTEEEETTEEEEECCCCHHHHHHHHH-HHH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHhcCCCCceEecCCcccccCcccccccCCCHHHHHHHHH-HHH
Confidence 5788999999999999999999999998877665543333221 223334443333 2222222222 111
Q ss_pred Hccc--ccCCCCce------------------------------------EEEEcChhHHHHHHHHHHHHhhhcccccee
Q 003364 682 TMRI--TTSEPKDV------------------------------------AFVVDGWALEIALKHYRKAFTELAILSRTA 723 (826)
Q Consensus 682 ~~~~--~~~~~~~~------------------------------------~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 723 (826)
.... ........ .+..... +.......+.++.........
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 175 (260)
T d2rbka1 98 KKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFIT--EEEEKEVLPSIPTCEIGRWYP 175 (260)
T ss_dssp HHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECCC--HHHHHHHGGGSTTCEEECSST
T ss_pred HcCCcEEEEecCceeeccchHHHHHHHHHhhccCcCcccCHhHhcCcceEEEeecCC--HHHHHHHHHHhccccceeecC
Confidence 1100 00000000 0010000 011111222222233333334
Q ss_pred EEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 724 ICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 724 i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
.+.++.|. +|+..++.|.+ ..+++++||||.||++||+.||+|||| +|+.+++++.||+|+.++
T Consensus 176 ~~~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav-~na~~~lk~~A~~vt~~~ 245 (260)
T d2rbka1 176 AFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM-GQAKEDVKAAADYVTAPI 245 (260)
T ss_dssp TCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHSSEECCCG
T ss_pred cEEEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEe-CCCCHHHHHhCCEEeCCC
Confidence 45788887 69887777754 467899999999999999999999999 999999999999999765
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.49 E-value=2.9e-14 Score=141.42 Aligned_cols=175 Identities=15% Similarity=0.178 Sum_probs=108.7
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEecCC-----CHHHHHHHHHHHHHHcc
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGK-----TEDEVCRSLERVLLTMR 684 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 684 (826)
..+.+.+.++|++|+++|++++++|||+...+..++..+++..+ ..++..+...+. .................
T Consensus 18 ~~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (230)
T d1wr8a_ 18 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 97 (230)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhcc
Confidence 35889999999999999999999999999999999999887544 111222221111 11111112222222211
Q ss_pred ccc------CCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcC
Q 003364 685 ITT------SEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGD 752 (826)
Q Consensus 685 ~~~------~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGD 752 (826)
... .......+.......+.+ +...+++...........+.++.|. +|+..++.+.. ..++++++||
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD 176 (230)
T d1wr8a_ 98 NARTSYTMPDRRAGLVIMRETINVETV-REIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGD 176 (230)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHH-HHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEEC
T ss_pred cccceeecccceeeEEEecccccHHHH-HHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeec
Confidence 111 111122222222223322 3333333322222223344566665 68877766543 5678999999
Q ss_pred CcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 753 GGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 753 g~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
|.||++||+.||+|||| +|+.+.+++.||+|+.++
T Consensus 177 ~~NDi~ml~~ag~~vav-~na~~~~k~~A~~v~~~~ 211 (230)
T d1wr8a_ 177 GENDLDAFKVVGYKVAV-AQAPKILKENADYVTKKE 211 (230)
T ss_dssp SGGGHHHHHHSSEEEEC-TTSCHHHHTTCSEECSSC
T ss_pred CccHHHHHHHCCeEEEE-CCCCHHHHHhCCEEECCC
Confidence 99999999999999999 999999999999999654
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.47 E-value=1e-13 Score=141.08 Aligned_cols=176 Identities=11% Similarity=0.148 Sum_probs=113.0
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC---CCCCcEEEecC--------CCHHHHHHHHHHH
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP---EPKGQLLSIDG--------KTEDEVCRSLERV 679 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~---~~~~~~~~~~~--------~~~~~~~~~~~~~ 679 (826)
...+++.++++|++++++| +++++|||++..+..+.++.+.... ..+|..+...+ ...+.....++..
T Consensus 17 ~~~i~~~~~~al~~l~~~~-~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~i~~~~i~~~~~~~i~~~~ 95 (267)
T d1nf2a_ 17 NLEISEKDRRNIEKLSRKC-YVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYI 95 (267)
T ss_dssp TSCCCHHHHHHHHHHTTTS-EEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTEEEEECCBCHHHHHHHHHHH
T ss_pred cCccCHHHHHHHHHHHcCC-EEEEECCCChHHHHHHHHHhcccCCceeccCCeEEEecccccccccCCCHHHHHHHHHHH
Confidence 3468899999999998755 7999999999999999988875432 12233333211 1222222222111
Q ss_pred HHHccccc---------------------------------------C-CCCceEEEEcChhHHHHHHHHHHHHhh-hcc
Q 003364 680 LLTMRITT---------------------------------------S-EPKDVAFVVDGWALEIALKHYRKAFTE-LAI 718 (826)
Q Consensus 680 ~~~~~~~~---------------------------------------~-~~~~~~l~~~g~~~~~~~~~~~~~~~~-~~~ 718 (826)
....... . ......+..+...++.+.+.+.+.+.. +..
T Consensus 96 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~ 174 (267)
T d1nf2a_ 96 -KPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKV 174 (267)
T ss_dssp -GGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEECCHHHHHHHHHHHHHHHTTTSEE
T ss_pred -HhcCceEEEeeCceEEecCCcHHHHHHHHhcCCCceecCcHHHHhhhccceEEEEeccHHHHHHHHHHHHHhhCCcEEE
Confidence 1100000 0 000111111222334444555555543 334
Q ss_pred ccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccchh
Q 003364 719 LSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (826)
Q Consensus 719 ~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~~ 789 (826)
......+.+++|. +|+..++.+.+ ..++|++||||.||++||+.||+|||| +|+.+++++.||+|+.+++
T Consensus 175 ~~~~~~~~di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~-~na~~~~k~~A~~i~~~~~ 250 (267)
T d1nf2a_ 175 FKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM-ENAIEKVKEASDIVTLTNN 250 (267)
T ss_dssp EEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC-TTSCHHHHHHCSEECCCTT
T ss_pred EEeecceeeecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEe-CCCCHHHHHhCCEEcCCCC
Confidence 4445567788887 69987777654 467899999999999999999999999 9999999999999997663
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.45 E-value=8.1e-14 Score=137.78 Aligned_cols=174 Identities=16% Similarity=0.156 Sum_probs=108.7
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEecCCCH------HHHHHHHHHHHHH
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGKTE------DEVCRSLERVLLT 682 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 682 (826)
+.++.+++.+++++|++.|++++++|||+...+..++..+|+..+ ..+|..+....... +............
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 346789999999999999999999999999999999999987554 11222222211111 1111111111111
Q ss_pred cccc-----cCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEc
Q 003364 683 MRIT-----TSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIG 751 (826)
Q Consensus 683 ~~~~-----~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iG 751 (826)
.... ........+.......+.+....... . ..+.....+.++.|. +|+..++.+.+ ..++|++||
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~G 174 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESR--G-FVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIG 174 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTT--T-EEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhc--C-cEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeec
Confidence 1000 01112222223333333333322211 1 112223345566665 69877766654 467899999
Q ss_pred CCcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 752 DGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 752 Dg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
||.||++||+.||+|||| +|+.+.+++.||+|+...
T Consensus 175 Ds~nD~~m~~~a~~~vav-~na~~~~k~~ad~v~~~~ 210 (225)
T d1l6ra_ 175 DSNNDMPMFQLPVRKACP-ANATDNIKAVSDFVSDYS 210 (225)
T ss_dssp CSGGGHHHHTSSSEEEEC-TTSCHHHHHHCSEECSCC
T ss_pred CCcchHHHHHHCCeEEEE-CCCcHHHHHhCCEEECCC
Confidence 999999999999999999 999999999999999654
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.42 E-value=2.5e-13 Score=139.32 Aligned_cols=175 Identities=14% Similarity=0.135 Sum_probs=109.6
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC----------------CCCCcEEEecCCCHHHHHHH
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP----------------EPKGQLLSIDGKTEDEVCRS 675 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~----------------~~~~~~~~~~~~~~~~~~~~ 675 (826)
..+++.++++|++|+++|++++++|||++..+..++.++++... ...+................
T Consensus 27 ~~i~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 106 (283)
T d2b30a1 27 IKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVYDQIGYTLLDETIETDVYAEL 106 (283)
T ss_dssp TCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEEECTTCCEEEECCCCHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcccccccCCceEEEeeeEEEcCCCcEeeecccCHHHHHHH
Confidence 36889999999999999999999999999999998877653210 00111222222222222222
Q ss_pred HHHHHHHcc---c--cc------------------------------------CCCCceEEEEcChhHHHHHHHHHHHHh
Q 003364 676 LERVLLTMR---I--TT------------------------------------SEPKDVAFVVDGWALEIALKHYRKAFT 714 (826)
Q Consensus 676 ~~~~~~~~~---~--~~------------------------------------~~~~~~~l~~~g~~~~~~~~~~~~~~~ 714 (826)
+......-. . .. .......+..+....+.+.+...+.+.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (283)
T d2b30a1 107 ISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLMIVLDPSESKTVIGNLKQKFK 186 (283)
T ss_dssp HHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHTTCCCCSEEEECCCTTTHHHHHHHHHHHST
T ss_pred HHHHHhhcccceEEEEecceeEEeccchHHHHHHHHhhccccccccHHHHhhcccceEEEEecCHHHHHHHHHHHHHHhc
Confidence 222111000 0 00 000111122233344555555555543
Q ss_pred h-hccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccc
Q 003364 715 E-LAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (826)
Q Consensus 715 ~-~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~ 787 (826)
. .........+.++.|. +|+..++.+.+ ..++|++||||.||++||+.||+|||| +|+.+++|+.||+++.+
T Consensus 187 ~~~~~~~~~~~~~~i~~~~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~-~na~~~~k~~a~~v~~~ 265 (283)
T d2b30a1 187 NKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAV-ANATDSAKSHAKCVLPV 265 (283)
T ss_dssp TTEEEEECTTSCEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEEC-TTCCHHHHHHSSEECSS
T ss_pred ccceEEEecceeEeecCCcchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEe-CCCCHHHHHhCCEEECC
Confidence 2 2222223345677776 58876666544 467899999999999999999999999 99999999999999954
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.33 E-value=9.2e-13 Score=131.61 Aligned_cols=173 Identities=14% Similarity=0.128 Sum_probs=96.4
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEe-cCCCH------------------
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSI-DGKTE------------------ 669 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~-~~~~~------------------ 669 (826)
.+..++.++++|++|+++|++++++|||++..+..+++.+++..+ ..+|..+.. ++...
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGI 94 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCSCEEETTTTEEEECTTCCC----------CEEEECSC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccccccccCCcEEEcCCCceecccchhHHHHHHHHHHhh
Confidence 455678899999999999999999999999999999999998654 122223222 21111
Q ss_pred --HHHHHHHHHHHHHcccc--c--------------------CCCCceEE-EEcChhHHHHHHHHHHHHhhhccccceeE
Q 003364 670 --DEVCRSLERVLLTMRIT--T--------------------SEPKDVAF-VVDGWALEIALKHYRKAFTELAILSRTAI 724 (826)
Q Consensus 670 --~~~~~~~~~~~~~~~~~--~--------------------~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~~~~~~~~i 724 (826)
......+.......... . ........ .+..... .. .+.............
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~ 169 (243)
T d1wzca1 95 RVEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRD-GW----EEVLVEGGFKVTMGS 169 (243)
T ss_dssp CHHHHHHHHHHHHHHHTCBCGGGSCHHHHHHHHCCCGGGHHHHTCCSSEEEECBCSSS-CH----HHHHHHTTCEEEECS
T ss_pred hHHHHHHHHHhhhhhcccchhhhhhHHHHHHhhcCchhHHHHHHhhhcchhhhhhhhH-HH----HHhhhhcCeEEeecc
Confidence 11111111100000000 0 00011111 1111100 00 011111111000001
Q ss_pred EEEeCcc--cHHHHHHHh----h-cCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccchh
Q 003364 725 CCRVTPS--QKAQLVELL----K-SCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (826)
Q Consensus 725 ~~~~~p~--~K~~iv~~l----~-~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~~ 789 (826)
..++.|. .|+..++.+ + ...+++++||||.||++||+.||+|||| +|+..++++.++.++..++
T Consensus 170 ~~~~~~~~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~-~Na~~~~~~~~~~i~~~~~ 240 (243)
T d1wzca1 170 RFYTVHGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV-GSLKHKKAQNVSSIIDVLE 240 (243)
T ss_dssp SSEEEECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE-SSCCCTTCEEESCHHHHHH
T ss_pred cccchhhhhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEe-CCCChHHHhhhhHHHHHHH
Confidence 1122333 577555443 3 2356999999999999999999999999 9998888887777766543
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.30 E-value=1.6e-13 Score=150.58 Aligned_cols=93 Identities=16% Similarity=0.180 Sum_probs=66.7
Q ss_pred eEEEeCCCccccccCCCceEEeecc-cccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccC-----cccchhhhhhh
Q 003364 3 RYIYINDDETSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVN-----PASTWGPLIFI 76 (826)
Q Consensus 3 r~~~~~~~~~r~~~~g~N~i~~~~~-~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~-----~~~~~~~l~~i 76 (826)
|++.-.+.++|+++||+|+++.++. ++| ..++++|++|++++++++++++++.+....+ .+...+.++++
T Consensus 22 ~GLs~~ea~~r~~~~G~N~l~~~~~~s~~----~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~I~~v 97 (472)
T d1wpga4 22 TGLTPDQVKRHLEKYGHNELPAEEGKSLW----ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLI 97 (472)
T ss_dssp TCBCHHHHHHHHHHSCCSSCCCCCCCCHH----HHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTTSTTSSSHHHHHHHHH
T ss_pred cCcCHHHHHHHHHhcCCCCCCCCCCCCHH----HHHHHHHhCHHHHHHHHHHHHHHHHHHHhcccccchhHhHhhhhhhe
Confidence 3443445577999999999999775 555 8999999999999999999998875533221 11222344556
Q ss_pred hhhhhhHHHHHHHHhhhhhHhhc
Q 003364 77 FAVSATKEAWDDYNRYLSDKKAN 99 (826)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~ 99 (826)
+++++...++|++++.++...+.
T Consensus 98 v~~n~~i~~~qe~~a~~~~~~l~ 120 (472)
T d1wpga4 98 LIANAIVGVWQERNAENAIEALK 120 (472)
T ss_dssp HHHHHHHHHHHHHSCCCHHHHHG
T ss_pred eeeeeeEEeEEechHHHHHHHHh
Confidence 66778889999998877655543
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.26 E-value=4.3e-12 Score=118.23 Aligned_cols=97 Identities=15% Similarity=0.136 Sum_probs=80.3
Q ss_pred HHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcC
Q 003364 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (826)
Q Consensus 620 ~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 699 (826)
.+|+.|+..|+.+.++||+....+...+.++++.
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~---------------------------------------------- 72 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK---------------------------------------------- 72 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC----------------------------------------------
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhccc----------------------------------------------
Confidence 3799999999999999999999999999998872
Q ss_pred hhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHH----HHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchH
Q 003364 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQ----LVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775 (826)
Q Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~----iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~ 775 (826)
.++. ...+|.. +++.++...++|+++||+.||++||+.|++|+|| +|+.+
T Consensus 73 -----------------------~~~~--~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap-~nA~~ 126 (177)
T d1k1ea_ 73 -----------------------LFFL--GKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAV-ADAPI 126 (177)
T ss_dssp -----------------------EEEE--SCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCH
T ss_pred -----------------------cccc--ccccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEc-CCccH
Confidence 1111 2234544 4444555678999999999999999999999999 99999
Q ss_pred HHHhhccccccch
Q 003364 776 QAARAADYSIGKF 788 (826)
Q Consensus 776 ~~~~~Ad~v~~~~ 788 (826)
++++.||+|+.+.
T Consensus 127 ~vk~~A~~Vt~~~ 139 (177)
T d1k1ea_ 127 YVKNAVDHVLSTH 139 (177)
T ss_dssp HHHTTSSEECSSC
T ss_pred HHHHhCCEEeCCC
Confidence 9999999999553
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.23 E-value=8.2e-11 Score=116.02 Aligned_cols=43 Identities=7% Similarity=0.071 Sum_probs=39.8
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~ 654 (826)
..+.+.++++|++|+++|++++++|||+...+..+.+++++..
T Consensus 20 ~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~ 62 (232)
T d1xvia_ 20 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 62 (232)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCC
Confidence 3588999999999999999999999999999999999999753
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.18 E-value=1.4e-11 Score=122.89 Aligned_cols=169 Identities=14% Similarity=0.190 Sum_probs=102.5
Q ss_pred chHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCC----CCCcEEEecCCCHHHHHHHH---------HHHHHHc
Q 003364 617 GVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE----PKGQLLSIDGKTEDEVCRSL---------ERVLLTM 683 (826)
Q Consensus 617 ~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~----~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 683 (826)
+..+++.++++.|+.++++|||+...+..+++++++..+. .+|..+.............+ .......
T Consensus 22 ~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (244)
T d1s2oa1 22 EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGF 101 (244)
T ss_dssp HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhhc
Confidence 4456677788999999999999999999999999987652 23333333222222111111 1111111
Q ss_pred cc------ccCCCCceEEEEcChhHHHHHHHHHHHHhh----hccccceeEEEEeCcc--cHHHHHHHhhcC----CCeE
Q 003364 684 RI------TTSEPKDVAFVVDGWALEIALKHYRKAFTE----LAILSRTAICCRVTPS--QKAQLVELLKSC----DYRT 747 (826)
Q Consensus 684 ~~------~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~p~--~K~~iv~~l~~~----~~~v 747 (826)
.. .....................+...+.+.. ...........++.|. +|+..++.+.+. .++|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~ 181 (244)
T d1s2oa1 102 EALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQT 181 (244)
T ss_dssp TTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGE
T ss_pred ccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhE
Confidence 10 001112223333322223333333333322 1111222234566665 699888877653 4679
Q ss_pred EEEcCCcccHHhHHhCCccEEecCCchHHHHhhcccccc
Q 003364 748 LAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIG 786 (826)
Q Consensus 748 ~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~ 786 (826)
+++|||.||++||+.||.||+| +|+.+++++.||.+..
T Consensus 182 v~~GD~~ND~~Ml~~~~~~vav-~na~~~lk~~a~~~~~ 219 (244)
T d1s2oa1 182 LVCGDSGNDIGLFETSARGVIV-RNAQPELLHWYDQWGD 219 (244)
T ss_dssp EEEECSGGGHHHHTSSSEEEEC-TTCCHHHHHHHHHHCC
T ss_pred EEEcCCCCCHHHHhhCCcEEEe-CCCCHHHHHHhhcccc
Confidence 9999999999999999999999 9999999999986554
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.14 E-value=7.9e-11 Score=114.83 Aligned_cols=125 Identities=20% Similarity=0.323 Sum_probs=91.3
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++|+.|+++|++++++||.....+.++++.+|+.... +.. +...
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~----v~a-n~~~------------------------ 132 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN----VFA-NRLK------------------------ 132 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG----EEE-ECEE------------------------
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccc----eee-eeee------------------------
Confidence 47899999999999999999999999999999999999985321 000 0000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEE--E----eCcccHHHHHHHhhc--CCCeEEEEcCCcccHHhHHhCC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICC--R----VTPSQKAQLVELLKS--CDYRTLAIGDGGNDVRMIQKAD 764 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~--~----~~p~~K~~iv~~l~~--~~~~v~~iGDg~ND~~ml~~A~ 764 (826)
+ ........ . ..+..|..+++.++. ..+.++++|||.||++|++.||
T Consensus 133 ----~---------------------~~~G~~~g~~~~~p~~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag 187 (217)
T d1nnla_ 133 ----F---------------------YFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPAD 187 (217)
T ss_dssp ----E---------------------CTTSCEEEECTTSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSS
T ss_pred ----e---------------------eehhccccceeeeeeeccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCC
Confidence 0 00000000 0 133468999998875 3568999999999999999999
Q ss_pred ccEEecCCch-HHHHhhccccccchhcc
Q 003364 765 IGVGISGREG-LQAARAADYSIGKFRFL 791 (826)
Q Consensus 765 vgIam~gn~~-~~~~~~Ad~v~~~~~~l 791 (826)
++||+.++.. ..+++.||+++.+|..|
T Consensus 188 ~~va~~~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 188 AFIGFGGNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp EEEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred ceEEECCCHHHHHHHHhCCCEeCCHHHh
Confidence 9999954433 45667899999887654
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.88 E-value=4e-10 Score=111.69 Aligned_cols=65 Identities=17% Similarity=0.197 Sum_probs=55.7
Q ss_pred ceeEEEEeCcc--cHHHHHHHhhc-CCCeEEEEcCC----cccHHhHHhCC-ccEEecCCchHHHHhhcccccc
Q 003364 721 RTAICCRVTPS--QKAQLVELLKS-CDYRTLAIGDG----GNDVRMIQKAD-IGVGISGREGLQAARAADYSIG 786 (826)
Q Consensus 721 ~~~i~~~~~p~--~K~~iv~~l~~-~~~~v~~iGDg----~ND~~ml~~A~-vgIam~gn~~~~~~~~Ad~v~~ 786 (826)
....+.+++|. +|+..++.|.+ ..++|++|||+ .||++||+.|+ .|+|| +|+.+.+|..+|++++
T Consensus 172 ~~~~~lei~~~~vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av-~na~~~~k~~~~~~~~ 244 (244)
T d2fuea1 172 GGMISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV-VSPQDTVQRCREIFFP 244 (244)
T ss_dssp CSSSCEEEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC-SSHHHHHHHHHHHHCT
T ss_pred ccCccceecchhccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEc-CCHHHHHHHHHHhcCC
Confidence 34556788887 69999999976 46789999995 59999999998 69999 9999999999998863
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.87 E-value=3.4e-09 Score=101.88 Aligned_cols=124 Identities=23% Similarity=0.230 Sum_probs=85.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
+..++....++.+ ..+.+.+++|+.............++.....+ ......
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~l~~~~-------------------------- 119 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCH--KLEIDD-------------------------- 119 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEE--EEEECT--------------------------
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcc--eeeeec--------------------------
Confidence 3456666666655 57899999999999988888888887432110 000000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn 772 (826)
...........+..+...++.++...++|+|||||.||++||+.||+|||| +
T Consensus 120 --------------------------~~~~~~~~~~~~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAm-n- 171 (206)
T d1rkua_ 120 --------------------------SDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-H- 171 (206)
T ss_dssp --------------------------TSCEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-S-
T ss_pred --------------------------ccccccccccchhhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEE-C-
Confidence 000111222233346678888999999999999999999999999999999 5
Q ss_pred chHHHHh-hccccc-cchhcchh
Q 003364 773 EGLQAAR-AADYSI-GKFRFLKR 793 (826)
Q Consensus 773 ~~~~~~~-~Ad~v~-~~~~~l~~ 793 (826)
+.+++++ ++|+++ .+++.+..
T Consensus 172 a~~~v~~~~~~~~~~~~~~d~~~ 194 (206)
T d1rkua_ 172 APENVIREFPQFPAVHTYEDLKR 194 (206)
T ss_dssp CCHHHHHHCTTSCEECSHHHHHH
T ss_pred CCHHHHHhCCCceeecCHHHHHH
Confidence 4566665 889987 44566654
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.87 E-value=1.3e-09 Score=106.86 Aligned_cols=173 Identities=11% Similarity=0.124 Sum_probs=94.1
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEecCCC-----HHHHHHHHHHHHHHccc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGKT-----EDEVCRSLERVLLTMRI 685 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 685 (826)
.+++.+.++|++|++ |+.++++|||+...+.... +.... ..++.....++.. .......++.....+..
T Consensus 22 ~i~~~~~~~l~~l~~-~~~v~i~TGR~~~~l~~~~---~~~~~~~~~ng~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 97 (229)
T d1u02a_ 22 YADAGLLSLISDLKE-RFDTYIVTGRSPEEISRFL---PLDINMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRS 97 (229)
T ss_dssp CCCHHHHHHHHHHHH-HSEEEEECSSCHHHHHHHS---CSSCEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhh-CCCEEEEcCCCHHHhhhhc---CccccEEecCeEEEecCCceeeecchhhhHHHHHHHHHHhHH
Confidence 488999999999987 5679999999988765432 21111 1111222222111 11111111222111110
Q ss_pred c-------cC--CCCceEEEEc---ChhHHHHHHHHHHHHhhh-ccccceeEEEEeCcc--cHHHHHHHhhcCCCeEEEE
Q 003364 686 T-------TS--EPKDVAFVVD---GWALEIALKHYRKAFTEL-AILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAI 750 (826)
Q Consensus 686 ~-------~~--~~~~~~l~~~---g~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~p~--~K~~iv~~l~~~~~~v~~i 750 (826)
. .. .......... ........+...+.+... ..+.....+.++.|. +|+..++.|... +.+++|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~idi~p~g~~Kg~al~~l~~~-~~~i~~ 176 (229)
T d1u02a_ 98 WVSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGE-RPAIIA 176 (229)
T ss_dssp HHHHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEEEECSSEEEEECTTCCHHHHHHHHHTT-SCEEEE
T ss_pred hhcccCCceecccccceeeeehhhhhhhHHHHHHHHHHHhhcCCeEEEeeceEEEEecCCCCHHHHHHHHhcc-ccceee
Confidence 0 00 0011111111 111222333333333221 122334557889987 699999999865 578999
Q ss_pred cCCcccHHhHHhCCccEEecCCchHHHHhhccccccchhcchh
Q 003364 751 GDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 751 GDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~~~l~~ 793 (826)
||+.||++||+.|+.|+|| +++.. +..|++.+.+.+....
T Consensus 177 GDs~ND~~Mf~~~~~~~av-~~g~~--~~~A~~~~~~~~ev~~ 216 (229)
T d1u02a_ 177 GDDATDEAAFEANDDALTI-KVGEG--ETHAKFHVADYIEMRK 216 (229)
T ss_dssp ESSHHHHHHHHTTTTSEEE-EESSS--CCCCSEEESSHHHHHH
T ss_pred cCCCChHHHHhccCCeEEE-EeCCC--CccCeEEcCCHHHHHH
Confidence 9999999999999877766 33321 3478888876655433
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.84 E-value=5e-09 Score=100.96 Aligned_cols=121 Identities=21% Similarity=0.183 Sum_probs=85.7
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
.++.+++.+.++.++..|..+.++||.....+....++.++...... ....+.
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------------- 126 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN--RLIVKD------------------------- 126 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEET-------------------------
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhh--hhcccc-------------------------
Confidence 36788999999999999999999999999999888888776321100 000000
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCc--ccHH----HHHHHhhcCCCeEEEEcCCcccHHhHHhCCc
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKA----QLVELLKSCDYRTLAIGDGGNDVRMIQKADI 765 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p--~~K~----~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v 765 (826)
...........+ ..|. .+.+.++...+++++||||.||++|++.||+
T Consensus 127 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~ 179 (210)
T d1j97a_ 127 ---------------------------GKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGL 179 (210)
T ss_dssp ---------------------------TEEEEEEECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSE
T ss_pred ---------------------------ccccccccccccccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCC
Confidence 000111111111 1233 3445555567889999999999999999999
Q ss_pred cEEecCCchHHHHhhccccccch
Q 003364 766 GVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 766 gIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
|||| |+.+.+++.||+|+.++
T Consensus 180 ~va~--na~~~lk~~Ad~vi~~~ 200 (210)
T d1j97a_ 180 KIAF--CAKPILKEKADICIEKR 200 (210)
T ss_dssp EEEE--SCCHHHHTTCSEEECSS
T ss_pred CEEE--CCCHHHHHhCCEEEcCC
Confidence 9999 67788999999999754
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.74 E-value=7.2e-09 Score=101.41 Aligned_cols=135 Identities=14% Similarity=0.151 Sum_probs=91.8
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.++.|+++|+++.++||-....+..+++.+|+....... .....+...
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an-~~~~~~~~~----------------------- 130 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCN-HASFDNDYI----------------------- 130 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEE-EEECSSSBC-----------------------
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeee-eEEEeCCcc-----------------------
Confidence 47899999999999999999999999999999999988863210000 000000000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn 772 (826)
...+ + ......+....|..|..+++.++..+++|+++||+.||++|++.||+++|+ +.
T Consensus 131 ---~~~~--------------~----~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~-~~ 188 (226)
T d2feaa1 131 ---HIDW--------------P----HSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR-DY 188 (226)
T ss_dssp ---EEEC--------------T----TCCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC-HH
T ss_pred ---eecc--------------c----cccccccccCCHHHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEe-cc
Confidence 0000 0 000011123356678999999999999999999999999999999999999 66
Q ss_pred chHHHHh-hcc-ccccchhcchh
Q 003364 773 EGLQAAR-AAD-YSIGKFRFLKR 793 (826)
Q Consensus 773 ~~~~~~~-~Ad-~v~~~~~~l~~ 793 (826)
..+.+.+ ..+ ....+++.+..
T Consensus 189 ~~~~~~~~~~~~~~~~d~~~i~~ 211 (226)
T d2feaa1 189 LLNECREQNLNHLPYQDFYEIRK 211 (226)
T ss_dssp HHHHHHHTTCCEECCSSHHHHHH
T ss_pred hHHHHHHcCCCeeecCCHHHHHH
Confidence 6666665 333 34466655543
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.58 E-value=1.2e-08 Score=100.78 Aligned_cols=60 Identities=20% Similarity=0.303 Sum_probs=46.8
Q ss_pred eEEEEeCcc--cHHHHHHHhhc-CCCeEEEEcC----CcccHHhHHhCC-ccEEecCCchHHHHhhcccc
Q 003364 723 AICCRVTPS--QKAQLVELLKS-CDYRTLAIGD----GGNDVRMIQKAD-IGVGISGREGLQAARAADYS 784 (826)
Q Consensus 723 ~i~~~~~p~--~K~~iv~~l~~-~~~~v~~iGD----g~ND~~ml~~A~-vgIam~gn~~~~~~~~Ad~v 784 (826)
..+.++.|. +|+..++.|.. ..++|++||| |.||++||+.|| .|+++ +| .+++++.++.+
T Consensus 174 ~~~lei~~~~vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v-~~-~~~~~~~~~~l 241 (243)
T d2amya1 174 QISFDVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSV-TA-PEDTRRICELL 241 (243)
T ss_dssp TTEEEEEETTCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEEC-SS-HHHHHHHHHHH
T ss_pred CccceeeccccCHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEe-CC-HHHHHHHHHHH
Confidence 456788887 69998888865 4689999999 779999999998 57776 44 68888877654
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.89 E-value=6.7e-06 Score=79.21 Aligned_cols=124 Identities=20% Similarity=0.244 Sum_probs=86.3
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|++.|++++++||.+...+..+.+.+|+....+. ++.....
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~--~~~~~~~------------------------- 147 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSE--MLGGQSL------------------------- 147 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE--EECTTTS-------------------------
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccc--ccccccc-------------------------
Confidence 4579999999999999999999999999999999999998432211 0000000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCc-cEEec-
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVGIS- 770 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v-gIam~- 770 (826)
. ...-.|.--..+.+.++...+++++|||+.+|+.+-+.||+ .|.+.
T Consensus 148 ---------------------------~----~~kp~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~ 196 (224)
T d2hsza1 148 ---------------------------P----EIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTY 196 (224)
T ss_dssp ---------------------------S----SCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESS
T ss_pred ---------------------------c----cccccchhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeC
Confidence 0 00001122345667777778899999999999999999997 44441
Q ss_pred C-CchHHHHh-hccccccchhcchhh
Q 003364 771 G-REGLQAAR-AADYSIGKFRFLKRL 794 (826)
Q Consensus 771 g-n~~~~~~~-~Ad~v~~~~~~l~~l 794 (826)
| +...++.+ -+|+++.++..|..+
T Consensus 197 g~~~~~~l~~~~~d~~v~~l~dL~~i 222 (224)
T d2hsza1 197 GYNYNIPIAQSKPDWIFDDFADILKI 222 (224)
T ss_dssp SCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred CCCCcchhhhcCCCEEECCHHHHHHh
Confidence 1 22233444 589999988888764
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.86 E-value=2.1e-05 Score=75.24 Aligned_cols=121 Identities=12% Similarity=0.094 Sum_probs=82.9
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++|+.|+++|+++.++||.+...+..+.+.+|+...-+. ++..+.
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~--i~~~~~-------------------------- 139 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDA--LASAEK-------------------------- 139 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEECTT--------------------------
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccccccc--cccccc--------------------------
Confidence 3569999999999999999999999999999999999998432111 100000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE-EecC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GISG 771 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI-am~g 771 (826)
.. ...-.|.-=..+++.++..++++++|||+.+|+.|-+.||+.. ++..
T Consensus 140 -----------------------------~~-~~Kp~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~ 189 (218)
T d1te2a_ 140 -----------------------------LP-YSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPA 189 (218)
T ss_dssp -----------------------------SS-CCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred -----------------------------cc-cchhhHHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECC
Confidence 00 0000111124577777778899999999999999999999744 3311
Q ss_pred -CchHHH-Hhhccccccchhcc
Q 003364 772 -REGLQA-ARAADYSIGKFRFL 791 (826)
Q Consensus 772 -n~~~~~-~~~Ad~v~~~~~~l 791 (826)
....+. ...||+++.++..|
T Consensus 190 ~~~~~~~~~~~a~~~i~~l~el 211 (218)
T d1te2a_ 190 PEAQNDPRFVLANVKLSSLTEL 211 (218)
T ss_dssp TTTTTCGGGGGSSEECSCGGGC
T ss_pred CCCccchhhcCCCEEECChhhC
Confidence 121222 23689888888766
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.84 E-value=1.1e-05 Score=78.00 Aligned_cols=119 Identities=18% Similarity=0.174 Sum_probs=82.1
Q ss_pred ccCCchHHHHHHHHHcC-CeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 613 RLQDGVPETIETLRKAG-INFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~G-i~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
++-|++.+++++|++.| +++.++||.+...+....+..|+...-+. ++..+..
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~--i~~~~~~------------------------ 144 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPF--GAFADDA------------------------ 144 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSC--EECTTTC------------------------
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccc--ccccccc------------------------
Confidence 45689999999999987 89999999999999999999998544221 1000000
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccH----HHHHHHh---hcCCCeEEEEcCCcccHHhHHhCC
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK----AQLVELL---KSCDYRTLAIGDGGNDVRMIQKAD 764 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K----~~iv~~l---~~~~~~v~~iGDg~ND~~ml~~A~ 764 (826)
..+..+ ...++.+ ...++++++|||+.+|+.|-+.||
T Consensus 145 ------------------------------------~~~k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG 188 (228)
T d2hcfa1 145 ------------------------------------LDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELD 188 (228)
T ss_dssp ------------------------------------SSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTT
T ss_pred ------------------------------------ccccchhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcC
Confidence 011111 1223333 234678999999999999999999
Q ss_pred cc---EEecCC-chHHHHh-hccccccchhcchhh
Q 003364 765 IG---VGISGR-EGLQAAR-AADYSIGKFRFLKRL 794 (826)
Q Consensus 765 vg---Iam~gn-~~~~~~~-~Ad~v~~~~~~l~~l 794 (826)
+. |+. |. ...++.+ .||+++.++..|..+
T Consensus 189 ~~~i~v~~-g~~~~~~l~~~~ad~vi~~~~el~~~ 222 (228)
T d2hcfa1 189 ARSIAVAT-GNFTMEELARHKPGTLFKNFAETDEV 222 (228)
T ss_dssp CEEEEECC-SSSCHHHHHTTCCSEEESCSCCHHHH
T ss_pred CEEEEEcC-CCCCHHHHhhCCCCEEECCHHHHHHH
Confidence 54 333 43 3444555 689999999888774
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.51 E-value=0.00015 Score=66.86 Aligned_cols=61 Identities=21% Similarity=0.270 Sum_probs=45.9
Q ss_pred HHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc--EEe-cCCchH-HHHhhccccccchhcchhh
Q 003364 734 AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG--VGI-SGREGL-QAARAADYSIGKFRFLKRL 794 (826)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg--Iam-~gn~~~-~~~~~Ad~v~~~~~~l~~l 794 (826)
..+++.++...++++||||+.+|+.|=+.||++ +.+ .|.... .....||+++.++..+.++
T Consensus 115 ~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ 179 (182)
T d2gmwa1 115 LSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 179 (182)
T ss_dssp HHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred cchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHH
Confidence 467777777788999999999999999999985 333 233333 3334799999998777664
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.51 E-value=8.4e-05 Score=70.43 Aligned_cols=116 Identities=17% Similarity=0.140 Sum_probs=83.7
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.+++.++++.++..| +++++|+.+...+....+.+|+...-+
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd----------------------------------- 127 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFD----------------------------------- 127 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccccc-----------------------------------
Confidence 56799999999998775 899999999999999999999843221
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccH----HHHHHHhhcCCCeEEEEcCCcccHHhHHhCCc-cE
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK----AQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GV 767 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K----~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v-gI 767 (826)
..+.++-.+..| ..+++.++..++++++|||+.+|+.|-+.||+ .|
T Consensus 128 -----------------------------~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i 178 (210)
T d2ah5a1 128 -----------------------------GIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKL 178 (210)
T ss_dssp -----------------------------EEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred -----------------------------ccccccccccccccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEE
Confidence 111111122223 34566666678899999999999999999997 45
Q ss_pred Eec-C-CchHHHHh-hccccccchhcchh
Q 003364 768 GIS-G-REGLQAAR-AADYSIGKFRFLKR 793 (826)
Q Consensus 768 am~-g-n~~~~~~~-~Ad~v~~~~~~l~~ 793 (826)
++. | ...+++.+ .+|+++.++..|..
T Consensus 179 ~v~~g~~~~~~l~~~~pd~vi~~l~el~~ 207 (210)
T d2ah5a1 179 AITWGFGEQADLLNYQPDYIAHKPLEVLA 207 (210)
T ss_dssp EESSSSSCHHHHHTTCCSEEESSTTHHHH
T ss_pred EEcCCCCCHHHHHhCCCCEEECCHHHHHH
Confidence 551 2 34455555 58999988776655
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.50 E-value=5.5e-05 Score=74.38 Aligned_cols=124 Identities=21% Similarity=0.239 Sum_probs=84.1
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+++|+++.++||.+...+..+.+..|+....... +
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~-~------------------------------- 146 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDF-L------------------------------- 146 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSC-C-------------------------------
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccccc-c-------------------------------
Confidence 57899999999999999999999999999999998888874321100 0
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeE-EEEeCcccHHHHHHHhhcC-CCeEEEEcCCcccHHhHHhCCcc-EEe
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAI-CCRVTPSQKAQLVELLKSC-DYRTLAIGDGGNDVRMIQKADIG-VGI 769 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~vg-Iam 769 (826)
+....+ ...-.|..=..+++.++.. .+.+++|||+.+|+.+=+.||+- |++
T Consensus 147 --------------------------~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v 200 (257)
T d1swva_ 147 --------------------------VTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGV 200 (257)
T ss_dssp --------------------------BCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred --------------------------cccccccccccChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEE
Confidence 000000 0011222234677777764 58899999999999999999963 344
Q ss_pred -cCCc-----hHH-------------------HHh-hccccccchhcchhh
Q 003364 770 -SGRE-----GLQ-------------------AAR-AADYSIGKFRFLKRL 794 (826)
Q Consensus 770 -~gn~-----~~~-------------------~~~-~Ad~v~~~~~~l~~l 794 (826)
.|.. .++ +.. -|||++.+...|..+
T Consensus 201 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~vi~~l~eL~~i 251 (257)
T d1swva_ 201 ILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESV 251 (257)
T ss_dssp CTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHH
T ss_pred ccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCEEECCHHHHHHH
Confidence 1321 111 111 389999998888764
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=97.46 E-value=0.00013 Score=70.97 Aligned_cols=117 Identities=13% Similarity=0.133 Sum_probs=83.2
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
-.+.|++.+++++|+++|+++.++|+.+..........+|+......
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~--------------------------------- 172 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILEL--------------------------------- 172 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGG---------------------------------
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhh---------------------------------
Confidence 35679999999999999999999999999988888888887432110
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEE----eCccc--HHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCc
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCR----VTPSQ--KAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI 765 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~----~~p~~--K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v 765 (826)
.....+ .-|.- =..+++.++..++++++|||..+|+.+=+.||+
T Consensus 173 ------------------------------~~~~~d~~~~~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~ 222 (253)
T d1zs9a1 173 ------------------------------VDGHFDTKIGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADV 222 (253)
T ss_dssp ------------------------------CSEEECGGGCCTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTC
T ss_pred ------------------------------cceeeccccccCCCcHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCC
Confidence 000001 11221 135677777778999999999999999999998
Q ss_pred cEEe---cCCchH-HHHhhccccccchhcc
Q 003364 766 GVGI---SGREGL-QAARAADYSIGKFRFL 791 (826)
Q Consensus 766 gIam---~gn~~~-~~~~~Ad~v~~~~~~l 791 (826)
.... .|+... +..+.++.++.+++.|
T Consensus 223 ~ti~v~r~g~~~~~~~~~~~~~~i~sl~EL 252 (253)
T d1zs9a1 223 HVAVVVRPGNAGLTDDEKTYYSLITSFSEL 252 (253)
T ss_dssp EEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred EEEEEeCCCCCCCchhhcCCCcEECChHHh
Confidence 6544 245433 3334677788776654
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=97.33 E-value=6.9e-05 Score=70.94 Aligned_cols=122 Identities=17% Similarity=0.159 Sum_probs=80.9
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|++ ++++.++|+.....+..+.+.+|+...-+
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~----------------------------------- 125 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMA----------------------------------- 125 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEE-----------------------------------
T ss_pred ccccchhhhhhhhcc-ccccccccccccccccccccccccccccc-----------------------------------
Confidence 466999999999974 79999999999999999999988743210
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEe--c
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI--S 770 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam--~ 770 (826)
.+..++. . ....-.|.--..+++.++..++++++|||+.+|+.+-+.||+.... .
T Consensus 126 --~i~~~~~--------------------~-~~~KP~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~ 182 (207)
T d2hdoa1 126 --VTISADD--------------------T-PKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVW 182 (207)
T ss_dssp --EEECGGG--------------------S-SCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGG
T ss_pred --ccccccc--------------------c-ccchhhhhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEec
Confidence 0000000 0 0000012223567777777778999999999999999999987654 1
Q ss_pred CCchHHHHhhccccccchhcchh
Q 003364 771 GREGLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 771 gn~~~~~~~~Ad~v~~~~~~l~~ 793 (826)
|.....-...+|+++.++..|.+
T Consensus 183 g~~~~~~~~~~~~~i~~l~dll~ 205 (207)
T d2hdoa1 183 GMDPNADHQKVAHRFQKPLDILE 205 (207)
T ss_dssp GCCTTGGGSCCSEEESSGGGGGG
T ss_pred CCCChhHhhhcCcEeCCHHHHHh
Confidence 33322223467777766655544
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.30 E-value=0.00031 Score=69.27 Aligned_cols=43 Identities=12% Similarity=0.268 Sum_probs=39.8
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP 655 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~ 655 (826)
++|+++++.++.|++.|+++.++||--...+.++++++|+..+
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ 177 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHS 177 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBT
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCcc
Confidence 4899999999999999999999999999999999999998543
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=97.28 E-value=0.00017 Score=70.48 Aligned_cols=59 Identities=12% Similarity=0.104 Sum_probs=42.3
Q ss_pred HHHHHHhhcCCCeEEEEcCCc-ccHHhHHhCCc-cEEe-cCCc-hHHHHh---hccccccchhcch
Q 003364 734 AQLVELLKSCDYRTLAIGDGG-NDVRMIQKADI-GVGI-SGRE-GLQAAR---AADYSIGKFRFLK 792 (826)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~v-gIam-~gn~-~~~~~~---~Ad~v~~~~~~l~ 792 (826)
..+++.++...++++||||+. +|+.|-+.||+ +|.+ +|.. ..++.. .+|+++.++..|.
T Consensus 183 ~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL~ 248 (250)
T d2c4na1 183 RAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEID 248 (250)
T ss_dssp HHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred hhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHhC
Confidence 357777887889999999996 59999999997 5554 2322 222222 3589998887765
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.26 E-value=0.00022 Score=67.01 Aligned_cols=117 Identities=18% Similarity=0.176 Sum_probs=76.1
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.|++.++++.|+++|+++.++|+.+. .+..+.+..|+...-+
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~----------------------------------- 125 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFT----------------------------------- 125 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEE-----------------------------------
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccc-----------------------------------
Confidence 4679999999999999999999999765 5567788888732110
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE-EecC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GISG 771 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI-am~g 771 (826)
.++... ......-.|.-=..+++.++..++++++|||+.+|+.+-+.||+.. ++ .
T Consensus 126 --~i~~s~---------------------~~~~~Kp~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v-~ 181 (204)
T d2go7a1 126 --EILTSQ---------------------SGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINF-L 181 (204)
T ss_dssp --EEECGG---------------------GCCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEES-S
T ss_pred --cccccc---------------------cccccchhHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEE-c
Confidence 000000 0000001122234677777777889999999999999999999854 44 3
Q ss_pred CchHHHHhhccccccchhcchh
Q 003364 772 REGLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 772 n~~~~~~~~Ad~v~~~~~~l~~ 793 (826)
... ..+|+.+.+...+..
T Consensus 182 ~~~----~~~~~~~~~~~dl~~ 199 (204)
T d2go7a1 182 EST----YEGNHRIQALADISR 199 (204)
T ss_dssp CCS----CTTEEECSSTTHHHH
T ss_pred CCC----CCcCeecCCHHHHHH
Confidence 221 235565555555544
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=97.26 E-value=7.3e-05 Score=73.34 Aligned_cols=58 Identities=12% Similarity=0.174 Sum_probs=41.0
Q ss_pred HHHHHhhcCCCeEEEEcCCc-ccHHhHHhCCc-cEEec-C----CchHHHHhhccccccchhcch
Q 003364 735 QLVELLKSCDYRTLAIGDGG-NDVRMIQKADI-GVGIS-G----REGLQAARAADYSIGKFRFLK 792 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~v-gIam~-g----n~~~~~~~~Ad~v~~~~~~l~ 792 (826)
.+++.++..+++++||||+. +|+.|.+.||+ +|.+. | ++....+..+|++++++..+.
T Consensus 188 ~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e~~ 252 (253)
T d1yv9a1 188 RAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWT 252 (253)
T ss_dssp HHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred HHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHHcC
Confidence 56677777789999999996 59999999998 66551 2 111122224699998877653
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.18 E-value=0.00028 Score=67.77 Aligned_cols=117 Identities=11% Similarity=0.100 Sum_probs=81.3
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+ +|++++++|+-+........+.+|+...-+.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~---------------------------------- 144 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDS---------------------------------- 144 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSE----------------------------------
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccccc----------------------------------
Confidence 46799999999997 5899999999999988999999997432110
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEE-e---CcccH--HHHHHHhhcCCCeEEEEcCC-cccHHhHHhCCc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-V---TPSQK--AQLVELLKSCDYRTLAIGDG-GNDVRMIQKADI 765 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~---~p~~K--~~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~v 765 (826)
.+.+. + -|.-. ..+++.++..++++++|||+ .+|+.+-+.||+
T Consensus 145 ------------------------------i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~ 194 (230)
T d1x42a1 145 ------------------------------ITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGM 194 (230)
T ss_dssp ------------------------------EEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTC
T ss_pred ------------------------------ccccccccccchhhHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCC
Confidence 00000 0 11111 35667777778899999998 689999999997
Q ss_pred cEE-ec-CCchHHHHhhccccccchhcchhh
Q 003364 766 GVG-IS-GREGLQAARAADYSIGKFRFLKRL 794 (826)
Q Consensus 766 gIa-m~-gn~~~~~~~~Ad~v~~~~~~l~~l 794 (826)
... +. +....+....+|+++.+++.|..+
T Consensus 195 ~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~ 225 (230)
T d1x42a1 195 TSILLDRKGEKREFWDKCDFIVSDLREVIKI 225 (230)
T ss_dssp EEEEECTTSCCGGGGGGSSEEESSTTHHHHH
T ss_pred EEEEECCCCCCcccccCCCEEECCHHHHHHH
Confidence 542 31 223333445789999888777653
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=97.11 E-value=0.00071 Score=66.26 Aligned_cols=61 Identities=20% Similarity=0.260 Sum_probs=45.1
Q ss_pred HHHHHHhhcCCCeEEEEcCCc-ccHHhHHhCCc-cEEe-cC-CchHHHHh---hccccccchhcchhh
Q 003364 734 AQLVELLKSCDYRTLAIGDGG-NDVRMIQKADI-GVGI-SG-REGLQAAR---AADYSIGKFRFLKRL 794 (826)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~v-gIam-~g-n~~~~~~~---~Ad~v~~~~~~l~~l 794 (826)
..+++.++...++++||||+. +|+.+-+.||+ +|.+ +| +...++.. .+|+++.+...|.++
T Consensus 192 ~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~ 259 (261)
T d1vjra_ 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKA 259 (261)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHH
T ss_pred HHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHH
Confidence 457777777889999999995 69999999997 6665 23 22344443 359999988877664
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.88 E-value=0.00046 Score=62.27 Aligned_cols=90 Identities=11% Similarity=0.016 Sum_probs=64.3
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCCh-hHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQ-NTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~-~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
++.|++.++++.|+++|++++++|+.+. ..+....+..++....
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~----------------------------------- 90 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYF----------------------------------- 90 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGC-----------------------------------
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccc-----------------------------------
Confidence 4789999999999999999999997665 4455556666652111
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCccc--HHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQ--KAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~--K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI 767 (826)
..+...-.|.. -..+++.++...+++++|||+..|+.+-+.||+-.
T Consensus 91 ------------------------------~~~~~~~kp~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~ 138 (164)
T d1u7pa_ 91 ------------------------------IQREIYPGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTC 138 (164)
T ss_dssp ------------------------------SEEEESSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred ------------------------------eeeecccCCChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEE
Confidence 11111112222 23567777778899999999999999999999844
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=96.79 E-value=0.00069 Score=58.81 Aligned_cols=105 Identities=20% Similarity=0.273 Sum_probs=73.7
Q ss_pred cCCccHHHHHHHHHhCCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhh
Q 003364 454 AQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPY 533 (826)
Q Consensus 454 ~~~~~e~all~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~ 533 (826)
+.||..+|++++|++.+........ +.-....+|........+.+ ++ ..+..|++..+..+
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~g~~~----~g--~~v~~G~~~~~~~~ 89 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRERDVQ-------------SLHATFVPFTAQSRMSGINI----DN--RMIRKGSVDAIRRH 89 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCCCTT-------------TTTCEEEEEETTTTEEEEEE----TT--EEEEEECHHHHHHH
T ss_pred CCchHHHHHHHHHHHhcCCCccccc-------------cccccccccccccceEEEEE----CC--EEEEecHHHHHHHH
Confidence 5799999999999876432211110 01112345555555444332 33 35667999888776
Q ss_pred hhc--CCChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeec
Q 003364 534 AHA--GQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIE 611 (826)
Q Consensus 534 ~~~--~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~ 611 (826)
+.. ...+..+.+.+.++..+|.+++.+| .|.+++|++++.
T Consensus 90 ~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va--------------------------------------~d~~~~G~i~l~ 131 (136)
T d2a29a1 90 VEANGGHFPTDVDQKVDQVARQGATPLVVV--------------------------------------EGSRVLGVIALK 131 (136)
T ss_dssp HHHHTCCCCHHHHHHHHHHHHTTSEEEEEE--------------------------------------ETTEEEEEEEEE
T ss_pred HHHcCCCCcHHHHHHHHHHHHCCCeEEEEE--------------------------------------ECCEEEEEEEEE
Confidence 542 3567889999999999999999999 688999999999
Q ss_pred cccC
Q 003364 612 DRLQ 615 (826)
Q Consensus 612 d~l~ 615 (826)
|+++
T Consensus 132 D~iK 135 (136)
T d2a29a1 132 DIVK 135 (136)
T ss_dssp ESSC
T ss_pred eecC
Confidence 9986
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.73 E-value=0.00064 Score=60.07 Aligned_cols=31 Identities=16% Similarity=0.208 Sum_probs=27.9
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChh
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQN 641 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~ 641 (826)
++.+.|++.+.++.|+++|++++++|||+..
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~ 64 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESG 64 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHH
Confidence 4678899999999999999999999999853
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.68 E-value=0.001 Score=64.34 Aligned_cols=116 Identities=18% Similarity=0.170 Sum_probs=80.0
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCce
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 693 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (826)
+.|++.++++.|+ .|++++++|+.+........+.+|+...-+.
T Consensus 110 ~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~----------------------------------- 153 (247)
T d2gfha1 110 LADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQSYFDA----------------------------------- 153 (247)
T ss_dssp CCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSE-----------------------------------
T ss_pred cCccHHHHHHHhh-cccceEEeecccchhhhhhhhhccccccccc-----------------------------------
Confidence 5689999999998 5899999999999988898999997433211
Q ss_pred EEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccH------HHHHHHhhcCCCeEEEEcCCc-ccHHhHHhCCcc
Q 003364 694 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK------AQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIG 766 (826)
Q Consensus 694 ~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K------~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~vg 766 (826)
.+.++-....| ..+++.++..++++++|||+. +|+.+-+.||+.
T Consensus 154 -----------------------------i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~ 204 (247)
T d2gfha1 154 -----------------------------IVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLK 204 (247)
T ss_dssp -----------------------------EEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCS
T ss_pred -----------------------------cccccccccchhhhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCe
Confidence 00000011123 356677777788999999995 899999999996
Q ss_pred -EEe-cCCc-h-HHHHhhccccccchhcchhh
Q 003364 767 -VGI-SGRE-G-LQAARAADYSIGKFRFLKRL 794 (826)
Q Consensus 767 -Iam-~gn~-~-~~~~~~Ad~v~~~~~~l~~l 794 (826)
+.. .+.+ . .+....+|+++.+...|..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~p~~~i~~l~eL~~l 236 (247)
T d2gfha1 205 ATVWINKSGRVPLTSSPMPHYMVSSVLELPAL 236 (247)
T ss_dssp EEEEECTTCCCCSSCCCCCSEEESSGGGHHHH
T ss_pred EEEEECCCCCCcccccCCCCEEECCHHHHHHH
Confidence 433 1111 1 11122578888888777764
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=96.59 E-value=0.0014 Score=62.02 Aligned_cols=123 Identities=11% Similarity=0.107 Sum_probs=83.1
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.+++.++++.+++.|+++.++|+-....+.......++...-+. ++..
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~--~~~s---------------------------- 142 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDH--LLSV---------------------------- 142 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEES----------------------------
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccc--eeee----------------------------
Confidence 4568999999999999999999999999988888888776432211 0000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEe---
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI--- 769 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam--- 769 (826)
. ......-.|.-=..+++.++..++++++|||+.+|+.+=+.||+-...
T Consensus 143 -------~---------------------~~~~~KP~p~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r 194 (220)
T d1zrna_ 143 -------D---------------------PVQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINR 194 (220)
T ss_dssp -------G---------------------GGTCCTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECT
T ss_pred -------e---------------------eeeccccHHHHHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcC
Confidence 0 000000011111356777777889999999999999999999987543
Q ss_pred cCCchHHHHhhccccccchhcchh
Q 003364 770 SGREGLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 770 ~gn~~~~~~~~Ad~v~~~~~~l~~ 793 (826)
.+....+....+|+++.++..|..
T Consensus 195 ~~~~~~~~~~~~d~~i~~l~el~~ 218 (220)
T d1zrna_ 195 TGNVFEEMGQTPDWEVTSLRAVVE 218 (220)
T ss_dssp TCCCCCSSSCCCSEEESSHHHHHT
T ss_pred CCCCcccccCCCCEEECCHHHHHh
Confidence 122233333467998888777655
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=96.54 E-value=0.0027 Score=59.36 Aligned_cols=36 Identities=19% Similarity=0.127 Sum_probs=30.0
Q ss_pred HHHHHHhhcCCCeEEEEcCCcccHHhHHhCCc-cEEe
Q 003364 734 AQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVGI 769 (826)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v-gIam 769 (826)
..+++.++...++++||||+.+|+.+=+.||+ +|.+
T Consensus 136 ~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v 172 (209)
T d2o2xa1 136 VEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWL 172 (209)
T ss_dssp HHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEE
T ss_pred hHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEE
Confidence 35667777777899999999999999999998 5555
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.43 E-value=0.0053 Score=56.25 Aligned_cols=40 Identities=15% Similarity=0.343 Sum_probs=33.4
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~ 653 (826)
.+.|++.+.|+.|++.|++++++|+.+... ....+.+++.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~~l~ 118 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKTSIA 118 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHTTCG
T ss_pred cccchhHHHHHHHHhhhccccccccCccch-hhhhhhhccc
Confidence 467999999999999999999999987644 4567788873
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=96.38 E-value=0.0021 Score=62.44 Aligned_cols=58 Identities=16% Similarity=0.181 Sum_probs=42.5
Q ss_pred HHHHHHhhcCCCeEEEEcCCcc-cHHhHHhCCc-cEEe-cCCc-hHHHHhh---ccccccchhcc
Q 003364 734 AQLVELLKSCDYRTLAIGDGGN-DVRMIQKADI-GVGI-SGRE-GLQAARA---ADYSIGKFRFL 791 (826)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~N-D~~ml~~A~v-gIam-~gn~-~~~~~~~---Ad~v~~~~~~l 791 (826)
..+++.++...++++||||+.+ |+.+-+.||+ +|.+ +|.. .+++... +|+++.++..+
T Consensus 187 ~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~ 251 (253)
T d1wvia_ 187 NKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEW 251 (253)
T ss_dssp HHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGC
T ss_pred eehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHc
Confidence 4677777777889999999966 9999999998 7776 2322 3333433 48998887655
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=96.19 E-value=0.0044 Score=56.82 Aligned_cols=41 Identities=12% Similarity=0.191 Sum_probs=32.4
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCCh----hHHHHHHHHcCCCC
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQ----NTAIQIALSCNFIS 654 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~----~~a~~~a~~~gi~~ 654 (826)
..+++++.++.++++|++++.+|||.. .++..+.+.+|+..
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~ 131 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA 131 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCc
Confidence 457999999999999999999999974 34455556678743
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=95.82 E-value=0.0032 Score=56.12 Aligned_cols=33 Identities=15% Similarity=0.233 Sum_probs=25.5
Q ss_pred HHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE
Q 003364 735 QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI 767 (826)
++++.++...++++||||+..|+.|=+.||+.-
T Consensus 112 ~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~ 144 (161)
T d2fpwa1 112 RYLAEQAMDRANSYVIGDRATDIQLAENMGING 144 (161)
T ss_dssp GGC----CCGGGCEEEESSHHHHHHHHHHTSEE
T ss_pred HHHHhcCCChhcEEEECCCHHHHHHHHHcCCeE
Confidence 566667777889999999999999999999854
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=95.73 E-value=0.003 Score=59.61 Aligned_cols=99 Identities=11% Similarity=0.177 Sum_probs=66.9
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCC
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (826)
..++-|++.+.++.|++.|+++.++|+... +....+..|+....+. +
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~---i---------------------------- 135 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDA---I---------------------------- 135 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSE---E----------------------------
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccccc---c----------------------------
Confidence 346789999999999999999999999754 5667777887432110 0
Q ss_pred CceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCc-cEEe
Q 003364 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVGI 769 (826)
Q Consensus 691 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v-gIam 769 (826)
+.+. ......-.|.-=..+++.++..++++++|||+.+|+.+-+.||+ +|++
T Consensus 136 ------~~~~---------------------~~~~~KP~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v 188 (221)
T d1o08a_ 136 ------ADPA---------------------EVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGV 188 (221)
T ss_dssp ------CCTT---------------------TSSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred ------cccc---------------------cccccccChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEE
Confidence 0000 00000001111135677777778899999999999999999997 5565
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=94.36 E-value=0.04 Score=51.43 Aligned_cols=122 Identities=14% Similarity=0.162 Sum_probs=79.4
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.+++.+.+++++ .+.+++|+.....+......+|+....... +....
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~-~~~~~--------------------------- 133 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAPH-IYSAK--------------------------- 133 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTTC-EEEHH---------------------------
T ss_pred chhhhHHHHhhhcc---ccceeeeecchhhhhhhhccccccccccee-ecccc---------------------------
Confidence 46788888887765 456799999999999999999985432210 00000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCccc--HHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc-EEe
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQ--KAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VGI 769 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~--K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg-Iam 769 (826)
.. . ....-|.. =..+++.++..++++++|||+.+|+.+=+.||+- |++
T Consensus 134 --------~~-------------------~--~~~~KP~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v 184 (222)
T d2fdra1 134 --------DL-------------------G--ADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGF 184 (222)
T ss_dssp --------HH-------------------C--TTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEE
T ss_pred --------cc-------------------c--ccccccCHHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEE
Confidence 00 0 00012221 1357777777788999999999999999999974 444
Q ss_pred cCCc------hHHHHh-hccccccchhcchhh
Q 003364 770 SGRE------GLQAAR-AADYSIGKFRFLKRL 794 (826)
Q Consensus 770 ~gn~------~~~~~~-~Ad~v~~~~~~l~~l 794 (826)
.+.. ...+.+ -||+++.+++.|..+
T Consensus 185 ~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~l 216 (222)
T d2fdra1 185 TGASHTYPSHADRLTDAGAETVISRMQDLPAV 216 (222)
T ss_dssp CCSTTCCTTHHHHHHHHTCSEEESCGGGHHHH
T ss_pred ccCCCCCcchHHHHHhCCCCEEECCHHHHHHH
Confidence 2111 233444 499999998887664
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.32 E-value=0.0086 Score=56.21 Aligned_cols=40 Identities=13% Similarity=0.209 Sum_probs=32.4
Q ss_pred HHHHHHhhcCCCeEEEEcCCcccHHhHHhCCc-cEEecCCch
Q 003364 734 AQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVGISGREG 774 (826)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v-gIam~gn~~ 774 (826)
..+++.++..+++++||||...|+.+=+.||+ +|.+ .+..
T Consensus 164 ~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V-~~~~ 204 (222)
T d1cr6a1 164 NFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILV-HNTA 204 (222)
T ss_dssp HHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEEC-CSSS
T ss_pred HHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEE-CCcc
Confidence 45778888888999999999999999999997 5555 4433
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.65 E-value=0.017 Score=54.02 Aligned_cols=36 Identities=14% Similarity=0.251 Sum_probs=30.7
Q ss_pred HHHHHHhhcCCCeEEEEcCCcccHHhHHhCCc-cEEe
Q 003364 734 AQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVGI 769 (826)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v-gIam 769 (826)
..+++.++..++++++|||+..|+.+-+.+|+ +|.+
T Consensus 166 ~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v 202 (225)
T d1zd3a1 166 KFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 202 (225)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred HHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEE
Confidence 35777777778899999999999999999998 6666
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=93.60 E-value=0.088 Score=49.68 Aligned_cols=94 Identities=12% Similarity=0.089 Sum_probs=64.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++-+++.+++++|+ |+.+.++|+.+...+.......|+...-+. ++
T Consensus 93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~--v~------------------------------ 138 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDA--VI------------------------------ 138 (245)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSE--EE------------------------------
T ss_pred ccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccccc--cc------------------------------
Confidence 56789999999885 789999999999988888888887432211 00
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
.++.. -..+-.|.-=..+++.++..++++++|||+.+|+.+=+.||+.
T Consensus 139 -----~s~~~---------------------~~~KP~p~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~ 186 (245)
T d1qq5a_ 139 -----SVDAK---------------------RVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFS 186 (245)
T ss_dssp -----EGGGG---------------------TCCTTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred -----ccccc---------------------cccCccHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCe
Confidence 00000 0000011111357778887888999999999999999999964
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.19 E-value=0.039 Score=50.42 Aligned_cols=147 Identities=14% Similarity=0.123 Sum_probs=77.0
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHH------HHHHHHHHHHHHccccc
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTED------EVCRSLERVLLTMRITT 687 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 687 (826)
+-|++.++++.+++. ....++|---..-+.++|+.+|+.. . ++.+....+ +....+-...+.+.
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~-----e-~~~T~~~lD~~~~p~ee~e~ll~i~~~~~--- 151 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRG-----E-LHGTEVDFDSIAVPEGLREELLSIIDVIA--- 151 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCS-----E-EEEEBCCGGGCCCCHHHHHHHHHHHHHHH---
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCc-----e-eecccccccccCCChHHHHHHHHHhhhcc---
Confidence 569999999999877 6677777666778899999999831 1 222111111 11111111111110
Q ss_pred CCCCceEEEEcChhHHHHHHHHHHHHhhhcc---ccceeEEEEeCcccHHHHHHHhhc--CCCeEEEEcCCcccHHhHHh
Q 003364 688 SEPKDVAFVVDGWALEIALKHYRKAFTELAI---LSRTAICCRVTPSQKAQLVELLKS--CDYRTLAIGDGGNDVRMIQK 762 (826)
Q Consensus 688 ~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~p~~K~~iv~~l~~--~~~~v~~iGDg~ND~~ml~~ 762 (826)
+ .+.+.+.+.+...|..... ..... .+--..|..+++..-. .-...+++||+..|.+||+.
T Consensus 152 ----------d-~~~eel~e~~d~~f~~~e~~~i~e~Vk---~VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~ 217 (308)
T d1y8aa1 152 ----------S-LSGEELFRKLDELFSRSEVRKIVESVK---AVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEA 217 (308)
T ss_dssp ----------H-CCHHHHHHHHHHHHHSHHHHHHHHTCB---CCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHH
T ss_pred ----------C-ccHHHHHHHHHHHhccchHhhHHhhhc---ccCCchhHHHHHhhcccccCCcceeccCccccHHHHHH
Confidence 1 1112222222222222110 00000 0011246665554432 12335999999999999998
Q ss_pred C----CccEEecCCchHHHHhhcccccc
Q 003364 763 A----DIGVGISGREGLQAARAADYSIG 786 (826)
Q Consensus 763 A----~vgIam~gn~~~~~~~~Ad~v~~ 786 (826)
| |++||. |+...+.+.|++.+-
T Consensus 218 ~r~~gGlaIsF--NGN~Yal~eA~Vaii 243 (308)
T d1y8aa1 218 ARGLGGVAIAF--NGNEYALKHADVVII 243 (308)
T ss_dssp HHHTTCEEEEE--SCCHHHHTTCSEEEE
T ss_pred HhcCCCeeEEe--cCccccccccceEEe
Confidence 7 445555 444556778888763
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=91.98 E-value=0.018 Score=52.39 Aligned_cols=35 Identities=9% Similarity=0.149 Sum_probs=29.9
Q ss_pred HHHHHhhcCCCeEEEEcCCcccHHhHHhCCc-cEEe
Q 003364 735 QLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVGI 769 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v-gIam 769 (826)
.+++.++..++++++|||+.+|+.+-+.||+ +|.+
T Consensus 149 ~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v 184 (197)
T d2b0ca1 149 HVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 184 (197)
T ss_dssp HHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEC
T ss_pred HHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEE
Confidence 4667777778899999999999999999997 6666
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=84.57 E-value=1.9 Score=34.53 Aligned_cols=76 Identities=14% Similarity=0.157 Sum_probs=49.0
Q ss_pred cCCccHHHHHHHHHhCCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhh
Q 003364 454 AQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPY 533 (826)
Q Consensus 454 ~~~~~e~all~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~ 533 (826)
+.||..+|+++++++.+........ ++ ..| .+ .+ +. .. +.=|.++.+.+.
T Consensus 26 S~HPlA~AIv~~a~~~~~~~~~~~~-------------~~---~~~----G~--Gi--~g---~~---v~vG~~~~~~~~ 75 (113)
T d2b8ea2 26 SEHPIAEAIVKKALEHGIELGEPEK-------------VE---VIA----GE--GV--VA---DG---ILVGNKRLMEDF 75 (113)
T ss_dssp CCSHHHHHHHHHHHTTTCCCCCCSC-------------EE---EET----TT--EE--EE---TT---EEEECHHHHHHT
T ss_pred CCCchHHHHHHHHHHhcCCCCcccc-------------ce---eec----cc--eE--Ee---EE---EEECcHHHHHhc
Confidence 6799999999999988764322111 11 011 11 11 11 11 223888887654
Q ss_pred hhcCCChhHHHHHHHHHHHcCCeEEEEE
Q 003364 534 AHAGQQTRTFVEAVEQYSQLGLRTLCLA 561 (826)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~G~rvl~~A 561 (826)
.- ..++.+.+.+..+..+|..++.+|
T Consensus 76 ~~--~~~~~~~~~~~~~~~~G~T~v~va 101 (113)
T d2b8ea2 76 GV--AVSNEVELALEKLEREAKTAVIVA 101 (113)
T ss_dssp TC--CCCHHHHHHHHHHHTTTCEEEEEE
T ss_pred CC--CCCHHHHHHHHHHHhCCCeEEEEE
Confidence 32 346778899999999999999999
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=80.28 E-value=0.93 Score=37.09 Aligned_cols=40 Identities=10% Similarity=0.029 Sum_probs=32.0
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHH---HHHHHHcCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTA---IQIALSCNF 652 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a---~~~a~~~gi 652 (826)
++-+++.+.|++|++.|+++++.|+|+...- ..-+++.|+
T Consensus 21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i 63 (122)
T d2obba1 21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGL 63 (122)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTC
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCC
Confidence 4678999999999999999999999986543 444555555
|