Citrus Sinensis ID: 003373

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-----
MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLASKAPSKEKRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASASLPNGQLDSVSSVNDAETPGVESELRELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERQVLSCGC
cccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccccccccccccccHHHHHccccccccccccHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccc
ccccccccccHHHHHHHHHHHHcHHHHHccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccHHHcccccccEEEEcccccccccccccccccccccccEEcccccHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccHHHccHHHHHHHHHHHccccccccccccccccEEEEEccccccccccccHHHHHcccccccccccccccccccHcccccHHHHHHHHHHHHHHHHHHHHHccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHcccccccccccccHcHcccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHccccHHHHHHHHccHHHcccccccccccccccHHHHHHHHHHHHHHcccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
mdifdglpispekAYLREELARIEVswvaprfdslphVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMhemddevpTTVAVAYTtnnsqplsrrtrlkgdnqfgvhgladgshsstfdghdedgsleahdetsldglsigwlanstpdEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAqtgttglhfmkgqlrsyqlpkqkrqngislsgtllavspvsalmapMGKAQAAAKELLDSILDSVVRIFENHVVVGELLesrssrhdintpksmiadanwnpdseasvtggySIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLaskapskekrdgsedgltfafrftdatisipnqgADLIrqgwsrrgtnvlqegygtaavlpEQGIYLAASIYRPVLQFTDKVASMlpqkysqlgNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAisspaafrprahtaatyvpsiekgrpVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGrhdidkllrlepasaslpngqldsvssvndaetpgvESELRELFLSLRpirqenlihdENKLILLASLSDSLEYVADSIERQVLSCGC
mdifdglpispEKAYLREELARIEVSwvaprfdslPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKrrlgtrnkqlhqlwYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYttnnsqplsrrtrLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVgellesrssrhdintpksmiadanwnpdSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARlaskapskekrdgsedGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAIsspaafrprAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASAslpngqldsvssvNDAETPGVESELRELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERQVLSCGC
MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNdiieevvdevvHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLASKAPSKEKRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASASLPNGQLDSVSSVNDAETPGVeselrelflslrPIRQENLIHDENKLILLASLSDSLEYVADSIERQVLSCGC
************KAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAY****************************************************GLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINS****IG****TGTTGLHFMKGQL*************ISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELL***************************SVTGGYSIGFSMTVLQSECQQLICEILRAT*******************************LTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRL******************************RELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIER*******
*******************LARIEVSWVAPRFDSLPHVV*****************QNDIIEEVVDEVVHAYHTGFNKAIQNYSQI***********************************WYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSS********************************************************************************************KSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQ***************************************************P***LMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSR***********************TGGYSIGFSMTVLQSECQQLICEILR***************************************************************************VLPEQGIYLAASIYRPVLQFTDKVAS*************LLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAA*******KGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVL**************KLLRLEP************************ESELRELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERQVLSCGC
MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATP****************************DGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASASLPNGQLDSV*************ELRELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERQVLSCGC
**IFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHE****************************************************************************PDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIG*A*QTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSE*SVTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLAS************DGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASASLP*G*****SSVNDAETPGVESELRELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERQVLSCGC
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MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLxxxxxxxxxxxxxxxxxxxxxxxxxxxxLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLASKAPSKEKRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASASLPNGQLDSVSSVNDAETPGVESELRELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERQVLSCGC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query825 2.2.26 [Sep-21-2011]
Q93YU5 1053 Probable exocyst complex yes no 0.985 0.772 0.748 0.0
Q96A65 974 Exocyst complex component yes no 0.256 0.217 0.297 4e-17
O35382 975 Exocyst complex component yes no 0.198 0.168 0.321 4e-17
Q62824 975 Exocyst complex component yes no 0.198 0.168 0.321 4e-17
Q9HE88 1111 Probable exocyst complex N/A no 0.208 0.154 0.290 2e-15
Q54P76 1182 Exocyst complex component yes no 0.249 0.174 0.253 4e-14
Q9VNH6 985 Exocyst complex component yes no 0.196 0.164 0.280 2e-10
P32855 1065 Exocyst complex component yes no 0.236 0.183 0.228 2e-06
Q9XWS2893 Exocyst complex component yes no 0.169 0.156 0.212 0.0007
>sp|Q93YU5|EXOC4_ARATH Probable exocyst complex component 4 OS=Arabidopsis thaliana GN=SEC8 PE=1 SV=1 Back     alignment and function desciption
 Score = 1212 bits (3137), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/839 (74%), Positives = 711/839 (84%), Gaps = 26/839 (3%)

Query: 1   MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDI 60
           M IF+GLP+  +K YLREELARI+ SW A RFDSLPHVVHILTSKDRE ++ ILK+Q+D+
Sbjct: 1   MGIFNGLPVPSDKTYLREELARIDESWAAARFDSLPHVVHILTSKDREADIHILKEQSDV 60

Query: 61  IEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQ 120
           +EEVVDEVVHAYH GFNKAIQNYSQILRLFSES E I +LK DLAEAK+ LG RNKQLHQ
Sbjct: 61  VEEVVDEVVHAYHGGFNKAIQNYSQILRLFSESTEKIGDLKHDLAEAKQSLGARNKQLHQ 120

Query: 121 LWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVG 180
           LWYRSVTLRHIISLLDQIEGIAKVP+RIEKLIA KQ+YAA+Q++ QS+LMLEREGLQTVG
Sbjct: 121 LWYRSVTLRHIISLLDQIEGIAKVPSRIEKLIADKQFYAAIQVYLQSSLMLEREGLQTVG 180

Query: 181 ALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNN 240
           ALQDVRSELTKLRG LF+K+L+DLHAHLYNRGEYSS   S++E DDEVPTT AVA +  +
Sbjct: 181 ALQDVRSELTKLRGALFFKILDDLHAHLYNRGEYSSVASSIYERDDEVPTTTAVAASRMS 240

Query: 241 SQPLSRRTR-LKGDNQFGVHGLADGSH-------SSTFDGHDEDGSLEAHDETSLDGLSI 292
           SQPLSRRTR LKGD+QFGV GL +GS+       SS+FDGHDE+ S+E HDE++ D    
Sbjct: 241 SQPLSRRTRTLKGDSQFGVRGLTNGSYRTASNDESSSFDGHDEEDSVE-HDESTADTARN 299

Query: 293 G------------WLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIIC 340
           G            WL++STPDEF+EA+RKSD PLHVKYLQT+V+CLC+LGKVAAAGAIIC
Sbjct: 300 GTDSKLLSHQLPPWLSDSTPDEFIEAVRKSDDPLHVKYLQTLVQCLCMLGKVAAAGAIIC 359

Query: 341 QRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNG 400
           Q+LRPTIHEII SKIKAH +  N S+SA  Q  ++   GLH +KGQ  +Y+L K+K QNG
Sbjct: 360 QKLRPTIHEIIISKIKAHLETTNLSKSACSQGDRSVAAGLHLIKGQSEAYRLSKEKPQNG 419

Query: 401 ISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHD 460
           IS SGT LAVSPVS LMAP GKAQAAAKELLDSILD++V+IFENHVV+GELLE ++S+HD
Sbjct: 420 ISNSGTHLAVSPVSPLMAPGGKAQAAAKELLDSILDTIVKIFENHVVIGELLEMKASQHD 479

Query: 461 INTPKSMIADANWNPDSEAS-VTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAV 519
           INTP+S+  D NWN +SEAS  TGGY+I F +TVLQSECQQLICEILRATPEAASADAA 
Sbjct: 480 INTPRSLPTDVNWNTESEASQATGGYTISFPLTVLQSECQQLICEILRATPEAASADAAA 539

Query: 520 QTARLASKAPSKEKRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYG 579
           QTA+LA KAP K+KRD  EDGLTF FRFTDAT+SI NQGADLIRQGW +R  N   EGYG
Sbjct: 540 QTAKLAKKAPKKDKRDAPEDGLTFTFRFTDATVSISNQGADLIRQGWGKRAPNASLEGYG 599

Query: 580 TAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMF 639
           +AAVLPEQGIYLAASIYRPVLQFTDK+ SMLP+K+SQL NDGLL F ENFVKDHLLPTMF
Sbjct: 600 SAAVLPEQGIYLAASIYRPVLQFTDKITSMLPKKHSQLVNDGLLTFTENFVKDHLLPTMF 659

Query: 640 VDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPK 699
           VDYRKGVQQAISS AAFRPRAHT  TY  ++EKGRP+LQGLLAID LAKEVLGWAQAMPK
Sbjct: 660 VDYRKGVQQAISSAAAFRPRAHT-TTYTATVEKGRPILQGLLAIDLLAKEVLGWAQAMPK 718

Query: 700 FAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASASLPNGQL 759
           FA DLVKYVQTFLERT+ERCRTSYMEAVLEK SYMLIGRHDI+KL+RL+ ASA LP+   
Sbjct: 719 FATDLVKYVQTFLERTFERCRTSYMEAVLEKLSYMLIGRHDIEKLMRLDAASACLPSTLG 778

Query: 760 DSVSSVNDAETPGVESELRELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIER 818
            +VS    +E  G E EL +LFLSLRPI+Q+NLI D+NKLILLASLSDSLEYVADSIER
Sbjct: 779 HAVSH---SEAVGTEVELSDLFLSLRPIKQDNLIRDDNKLILLASLSDSLEYVADSIER 834
Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
Arabidopsis thaliana (taxid: 3702)
>sp|Q96A65|EXOC4_HUMAN Exocyst complex component 4 OS=Homo sapiens GN=EXOC4 PE=1 SV=1 Back     alignment and function description
>sp|O35382|EXOC4_MOUSE Exocyst complex component 4 OS=Mus musculus GN=Exoc4 PE=1 SV=2 Back     alignment and function description
>sp|Q62824|EXOC4_RAT Exocyst complex component 4 OS=Rattus norvegicus GN=Exoc4 PE=1 SV=1 Back     alignment and function description
>sp|Q9HE88|SEC8_NEUCR Probable exocyst complex component sec8 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=sec-8 PE=3 SV=1 Back     alignment and function description
>sp|Q54P76|EXOC4_DICDI Exocyst complex component 4 OS=Dictyostelium discoideum GN=exoc4 PE=3 SV=1 Back     alignment and function description
>sp|Q9VNH6|EXOC4_DROME Exocyst complex component 4 OS=Drosophila melanogaster GN=sec8 PE=1 SV=3 Back     alignment and function description
>sp|P32855|SEC8_YEAST Exocyst complex component SEC8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC8 PE=1 SV=1 Back     alignment and function description
>sp|Q9XWS2|EXOC4_CAEEL Exocyst complex component 4 OS=Caenorhabditis elegans GN=sec-8 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query825
225448968 1076 PREDICTED: probable exocyst complex comp 0.990 0.759 0.8 0.0
296085980 1084 unnamed protein product [Vitis vinifera] 0.990 0.753 0.792 0.0
356533947 1066 PREDICTED: probable exocyst complex comp 0.984 0.761 0.794 0.0
356574621 1065 PREDICTED: probable exocyst complex comp 0.983 0.761 0.785 0.0
224113089 1084 predicted protein [Populus trichocarpa] 0.964 0.734 0.742 0.0
449490429 1073 PREDICTED: probable exocyst complex comp 0.986 0.758 0.743 0.0
449444630 1073 PREDICTED: probable exocyst complex comp 0.986 0.758 0.743 0.0
297833818 1053 hypothetical protein ARALYDRAFT_897214 [ 0.985 0.772 0.747 0.0
224097788 1087 predicted protein [Populus trichocarpa] 0.981 0.745 0.721 0.0
18398855 1053 exocyst complex component 4 [Arabidopsis 0.985 0.772 0.748 0.0
>gi|225448968|ref|XP_002269663.1| PREDICTED: probable exocyst complex component 4-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1390 bits (3597), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 680/850 (80%), Positives = 748/850 (88%), Gaps = 33/850 (3%)

Query: 1   MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDI 60
           M  FDGLPISPEK+YLRE+L+RI+ SW A RFDSLPHVVHILTSKDREGE Q LK+Q+DI
Sbjct: 1   MGTFDGLPISPEKSYLREDLSRIDESWAAARFDSLPHVVHILTSKDREGEAQFLKEQSDI 60

Query: 61  IEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQ 120
           IEEVVDEVVHAYH+GFNKAIQNYSQILRLFSESA SI  LKVDLA+AK+ LG RNKQLHQ
Sbjct: 61  IEEVVDEVVHAYHSGFNKAIQNYSQILRLFSESAASISVLKVDLADAKKLLGARNKQLHQ 120

Query: 121 LWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVG 180
           LWYRSVTLRHII+LLDQ+EGIAKVPARIEKLIA KQ+YAAVQLHAQS LMLEREGLQTVG
Sbjct: 121 LWYRSVTLRHIIALLDQVEGIAKVPARIEKLIAEKQFYAAVQLHAQSTLMLEREGLQTVG 180

Query: 181 ALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNN 240
           ALQDVRSELTKLRG++FYK+LEDLHAHLYN+GEYSSA  S+HE DDEVPTT AVA++ N+
Sbjct: 181 ALQDVRSELTKLRGIIFYKILEDLHAHLYNKGEYSSAASSIHERDDEVPTTTAVAFSMNS 240

Query: 241 SQPLSRRTRL-KGDNQFGVHGLADGSH------SSTFDGHDEDGSLEAHDETSLDGLSI- 292
           SQPLSRRTRL KGDNQFGV GL DG         S+FDGHDE+G+LE HDE +LDG +  
Sbjct: 241 SQPLSRRTRLLKGDNQFGVLGLGDGYRPGSIDGGSSFDGHDEEGALELHDEATLDGYNAI 300

Query: 293 ---------------------GWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGK 331
                                 WL+ +TPDEF+E+++KSDAPLHVKYLQTMVECLC+LGK
Sbjct: 301 TKVNGGDGSQKDIKIVSHQIPPWLSYATPDEFLESMKKSDAPLHVKYLQTMVECLCMLGK 360

Query: 332 VAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQ 391
           VAAAGA+ICQRLRPTIHEIITSKIKAHA+L+NS+RS I +AA T TTGLH++KGQL SYQ
Sbjct: 361 VAAAGAMICQRLRPTIHEIITSKIKAHAELVNSTRSGICRAAHTATTGLHYLKGQLESYQ 420

Query: 392 LPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGEL 451
            PKQKRQNGISL+GTLLAVSPVS +MAP G AQ AAKELLDSILD VVRIFENHVVVGEL
Sbjct: 421 SPKQKRQNGISLAGTLLAVSPVSPVMAPAGTAQTAAKELLDSILDIVVRIFENHVVVGEL 480

Query: 452 LESRSSRHDINTPKSMIADANWNPDSEAS-VTGGYSIGFSMTVLQSECQQLICEILRATP 510
           LES+ ++ D+NTPKS+  + NWN DSEAS VTGGYSIGFS+TVLQSECQQLICEILRATP
Sbjct: 481 LESKGTQVDMNTPKSVTVEVNWNHDSEASQVTGGYSIGFSLTVLQSECQQLICEILRATP 540

Query: 511 EAASADAAVQTARLASKAPSKEKRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRG 570
           EAASADA VQTARLASKAPSKEKRD SEDGLTFAFRFTDATIS+PNQG DLIRQGW+RRG
Sbjct: 541 EAASADATVQTARLASKAPSKEKRDRSEDGLTFAFRFTDATISVPNQGVDLIRQGWTRRG 600

Query: 571 TNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFV 630
            NVLQEGYG+AA+LPEQGIYLAASIYRPV+QFTDK+ASMLP+KYSQLGNDGLLAFVENFV
Sbjct: 601 PNVLQEGYGSAAILPEQGIYLAASIYRPVIQFTDKIASMLPKKYSQLGNDGLLAFVENFV 660

Query: 631 KDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEV 690
           KDH LPTMFVDYRKGVQQAISSPAAFRPR+H A+TY P +EKGRPVLQGLLAIDFLAKEV
Sbjct: 661 KDHFLPTMFVDYRKGVQQAISSPAAFRPRSHAASTYSPLVEKGRPVLQGLLAIDFLAKEV 720

Query: 691 LGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPA 750
           LGWAQAMPKFA DLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDI+KL+R +PA
Sbjct: 721 LGWAQAMPKFAGDLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIEKLMRCDPA 780

Query: 751 SASLPN--GQLDSVSSVNDAETPGVESELRELFLSLRPIRQENLIHDENKLILLASLSDS 808
           SA LPN  GQ +  S+ +D +   VE EL +L LSLRPI+QENLI D+NKLILLASLSDS
Sbjct: 781 SACLPNPFGQPNMESNASDVDVE-VEMELCDLLLSLRPIKQENLIRDDNKLILLASLSDS 839

Query: 809 LEYVADSIER 818
           LEYVADSIER
Sbjct: 840 LEYVADSIER 849

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296085980|emb|CBI31421.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356533947|ref|XP_003535519.1| PREDICTED: probable exocyst complex component 4-like [Glycine max] Back     alignment and taxonomy information
>gi|356574621|ref|XP_003555444.1| PREDICTED: probable exocyst complex component 4-like [Glycine max] Back     alignment and taxonomy information
>gi|224113089|ref|XP_002316388.1| predicted protein [Populus trichocarpa] gi|222865428|gb|EEF02559.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449490429|ref|XP_004158603.1| PREDICTED: probable exocyst complex component 4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449444630|ref|XP_004140077.1| PREDICTED: probable exocyst complex component 4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297833818|ref|XP_002884791.1| hypothetical protein ARALYDRAFT_897214 [Arabidopsis lyrata subsp. lyrata] gi|297330631|gb|EFH61050.1| hypothetical protein ARALYDRAFT_897214 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224097788|ref|XP_002311074.1| predicted protein [Populus trichocarpa] gi|222850894|gb|EEE88441.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|18398855|ref|NP_566372.1| exocyst complex component 4 [Arabidopsis thaliana] gi|24418673|sp|Q93YU5.1|EXOC4_ARATH RecName: Full=Probable exocyst complex component 4; AltName: Full=Exocyst complex component Sec8; Short=AtSEC8 gi|16604637|gb|AAL24111.1| unknown protein [Arabidopsis thaliana] gi|26452109|dbj|BAC43144.1| unknown protein [Arabidopsis thaliana] gi|332641377|gb|AEE74898.1| exocyst complex component 4 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query825
TAIR|locus:2076249 1053 SEC8 "subunit of exocyst compl 0.675 0.528 0.716 0.0
UNIPROTKB|Q96A65 974 EXOC4 "Exocyst complex compone 0.256 0.217 0.288 1.8e-19
RGD|621791 975 Exoc4 "exocyst complex compone 0.198 0.168 0.309 3.1e-19
UNIPROTKB|Q62824 975 Exoc4 "Exocyst complex compone 0.198 0.168 0.309 3.1e-19
UNIPROTKB|F1PMM8 975 EXOC4 "Uncharacterized protein 0.312 0.264 0.264 1.3e-18
ZFIN|ZDB-GENE-041210-112 968 exoc4 "exocyst complex compone 0.198 0.169 0.309 1.5e-18
MGI|MGI:1096376 975 Exoc4 "exocyst complex compone 0.198 0.168 0.309 3.3e-18
DICTYBASE|DDB_G0284833 1182 exoc4 "exocyst complex subunit 0.185 0.129 0.288 3.9e-18
UNIPROTKB|A6QLD1 975 EXOC4 "EXOC4 protein" [Bos tau 0.311 0.263 0.271 4.2e-18
UNIPROTKB|E1BUN2 976 EXOC4 "Uncharacterized protein 0.311 0.263 0.269 8.9e-18
TAIR|locus:2076249 SEC8 "subunit of exocyst complex 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2045 (724.9 bits), Expect = 0., Sum P(2) = 0.
 Identities = 412/575 (71%), Positives = 467/575 (81%)

Query:   257 GVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIG------------WLANSTPDEFV 304
             G +  A    SS+FDGHDE+ S+E HDE++ D    G            WL++STPDEF+
Sbjct:   265 GSYRTASNDESSSFDGHDEEDSVE-HDESTADTARNGTDSKLLSHQLPPWLSDSTPDEFI 323

Query:   305 EAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINS 364
             EA+RKSD PLHVKYLQT+V+CLC+LGKVAAAGAIICQ+LRPTIHEII SKIKAH +  N 
Sbjct:   324 EAVRKSDDPLHVKYLQTLVQCLCMLGKVAAAGAIICQKLRPTIHEIIISKIKAHLETTNL 383

Query:   365 SRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNGISLSGTLLAVSPVSALMAPMGKAQ 424
             S+SA  Q  ++   GLH +KGQ  +Y+L K+K QNGIS SGT LAVSPVS LMAP GKAQ
Sbjct:   384 SKSACSQGDRSVAAGLHLIKGQSEAYRLSKEKPQNGISNSGTHLAVSPVSPLMAPGGKAQ 443

Query:   425 AAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANWNPDSEAS-VTG 483
             AAAKELLDSILD++V+IFENHVV+GELLE ++S+HDINTP+S+  D NWN +SEAS  TG
Sbjct:   444 AAAKELLDSILDTIVKIFENHVVIGELLEMKASQHDINTPRSLPTDVNWNTESEASQATG 503

Query:   484 GYSIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLASKAPSKEKRDGSEDGLTF 543
             GY+I F +TVLQSECQQLICEILRATPEAASADAA QTA+LA KAP K+KRD  EDGLTF
Sbjct:   504 GYTISFPLTVLQSECQQLICEILRATPEAASADAAAQTAKLAKKAPKKDKRDAPEDGLTF 563

Query:   544 AFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFT 603
              FRFTDAT+SI NQGADLIRQGW +R  N   EGYG+AAVLPEQGIYLAASIYRPVLQFT
Sbjct:   564 TFRFTDATVSISNQGADLIRQGWGKRAPNASLEGYGSAAVLPEQGIYLAASIYRPVLQFT 623

Query:   604 DKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTA 663
             DK+ SMLP+K+SQL NDGLL F ENFVKDHLLPTMFVDYRKGVQQAISS AAFRPRAHT 
Sbjct:   624 DKITSMLPKKHSQLVNDGLLTFTENFVKDHLLPTMFVDYRKGVQQAISSAAAFRPRAHTT 683

Query:   664 ATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSY 723
              TY  ++EKGRP+LQGLLAID LAKEVLGWAQAMPKFA DLVKYVQTFLERT+ERCRTSY
Sbjct:   684 -TYTATVEKGRPILQGLLAIDLLAKEVLGWAQAMPKFATDLVKYVQTFLERTFERCRTSY 742

Query:   724 MEAVLEKQSYMLIGRHDIDKLLRLEPASASLPNGQLDSVSSVNDAETPGVXXXXXXXXXX 783
             MEAVLEK SYMLIGRHDI+KL+RL+ ASA LP+    +VS    +E  G           
Sbjct:   743 MEAVLEKLSYMLIGRHDIEKLMRLDAASACLPSTLGHAVSH---SEAVGTEVELSDLFLS 799

Query:   784 XXPIRQENLIHDENKLILLASLSDSLEYVADSIER 818
               PI+Q+NLI D+NKLILLASLSDSLEYVADSIER
Sbjct:   800 LRPIKQDNLIRDDNKLILLASLSDSLEYVADSIER 834
GO:0000145 "exocyst" evidence=IEA;IDA
GO:0005634 "nucleus" evidence=ISM
GO:0006904 "vesicle docking involved in exocytosis" evidence=IEA
GO:0015031 "protein transport" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005515 "protein binding" evidence=IPI
GO:0009846 "pollen germination" evidence=IGI
GO:0009860 "pollen tube growth" evidence=IGI
GO:0005829 "cytosol" evidence=IDA
GO:0048354 "mucilage biosynthetic process involved in seed coat development" evidence=IMP
GO:0009506 "plasmodesma" evidence=IDA
GO:0006007 "glucose catabolic process" evidence=RCA
UNIPROTKB|Q96A65 EXOC4 "Exocyst complex component 4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|621791 Exoc4 "exocyst complex component 4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q62824 Exoc4 "Exocyst complex component 4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1PMM8 EXOC4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041210-112 exoc4 "exocyst complex component 4" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:1096376 Exoc4 "exocyst complex component 4" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0284833 exoc4 "exocyst complex subunit 4" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|A6QLD1 EXOC4 "EXOC4 protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E1BUN2 EXOC4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q93YU5EXOC4_ARATHNo assigned EC number0.74850.98540.7720yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pm.C_LG_X0909
hypothetical protein (1085 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query825
pfam04048142 pfam04048, Sec8_exocyst, Sec8 exocyst complex comp 1e-42
>gnl|CDD|202865 pfam04048, Sec8_exocyst, Sec8 exocyst complex component specific domain Back     alignment and domain information 
 Score =  151 bits (383), Expect = 1e-42
 Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 5/142 (3%)

Query: 15  YLREELARIEVSWVAPRFDSLPHVVHILTSKDREG-----EVQILKDQNDIIEEVVDEVV 69
            L+E L  I+  W     D    V   L   D             +     IE+ + EVV
Sbjct: 1   KLKEVLNTIKYEWPQVLSDDANPVELALQLLDDTSVGLAHRYPEFEQLKKRIEQALQEVV 60

Query: 70  HAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLR 129
           + +H GFN +I +Y +IL   + S E I++LK  L EAK+ LGTR  +L +L  RS   +
Sbjct: 61  NEHHQGFNSSIGSYHKILSSITSSQERIRQLKESLEEAKKLLGTRKPELKELNQRSQKYK 120

Query: 130 HIISLLDQIEGIAKVPARIEKL 151
            +I LLD IE + KVP ++E+L
Sbjct: 121 EMIELLDAIEELRKVPDKLEQL 142

Length = 142

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 825
KOG3691 982 consensus Exocyst complex subunit Sec8 [Intracellu 100.0
PF04048142 Sec8_exocyst: Sec8 exocyst complex component speci 99.98
PF10475291 DUF2450: Protein of unknown function N-terminal do 99.48
KOG2115951 consensus Vacuolar sorting protein VPS45 [Intracel 99.14
PF06248593 Zw10: Centromere/kinetochore Zw10; InterPro: IPR00 97.9
PF15469182 Sec5: Exocyst complex component Sec5 97.8
PF04100383 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007 97.68
PF04124338 Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 97.6
KOG2176800 consensus Exocyst complex, subunit SEC15 [Intracel 97.05
PF10392132 COG5: Golgi transport complex subunit 5; InterPro: 96.58
PF06148133 COG2: COG (conserved oligomeric Golgi) complex com 96.46
KOG2180793 consensus Late Golgi protein sorting complex, subu 96.05
KOG2069581 consensus Golgi transport complex subunit [Intrace 95.95
KOG2346636 consensus Uncharacterized conserved protein [Funct 95.08
PF0870087 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT te 91.78
KOG2307705 consensus Low density lipoprotein receptor [Intrac 90.69
PF10191766 COG7: Golgi complex component 7 (COG7); InterPro: 89.3
KOG0412773 consensus Golgi transport complex COD1 protein [In 85.71
KOG1961683 consensus Vacuolar sorting protein VPS52/suppresso 85.41
PF09763701 Sec3_C: Exocyst complex component Sec3; InterPro: 81.37
PF04437 494 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00 80.68
>KOG3691 consensus Exocyst complex subunit Sec8 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information 
Probab=100.00  E-value=1.6e-87  Score=764.12  Aligned_cols=685  Identities=20%  Similarity=0.224  Sum_probs=517.4

Q ss_pred             CCCCchHHHHHHHHHhHhhcCCCCCCchHHHHHhhcc--CchhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhHhhHH
Q 003373            8 PISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTS--KDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQ   85 (825)
Q Consensus         8 p~~~~~~~l~~~l~~I~~ew~~~~f~~~~~~l~~L~s--~~~e~~~~~l~~~~~~~~~~L~~vV~~h~~~Fn~sI~sy~~   85 (825)
                      |+.-++....+...+|...|.           .+.+.  .+||.++++||+.+++.+.+||++|++|+|+|+++|.+|++
T Consensus        18 ~~n~~~d~sn~~G~lInvi~n-----------L~~Se~~e~re~ek~~Led~Yk~~~a~Lq~lv~~H~q~~t~~i~sy~~   86 (982)
T KOG3691|consen   18 YVNYGTDMSNELGLLINVIRN-----------LVGSEDTEPRETEKERLEDSYKEFGAALQELVHTHKQDFTTGISSYGE   86 (982)
T ss_pred             cccccCCcccccchhhhHHHh-----------hccCCcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344455556666777777777           44432  38999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHhHHHHHHHHHHHHHHhhhcHHHHHHHHhccCHHHHHHHHH
Q 003373           86 ILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHA  165 (825)
Q Consensus        86 i~~~i~~Sq~~i~~lk~~L~~~k~~L~~~~~~L~~L~~~s~~~~~~i~iL~~Ie~l~~vP~kie~lis~k~yl~A~~lL~  165 (825)
                      |++.|+.||++|.+||++|.+||++|+|+|++|++||.++.+||+||++|++||+++++|++||.+|++|+|++|.++|.
T Consensus        87 i~s~It~~rerI~~vK~~L~~~k~ll~~~rdeLqklw~~~~q~K~Vi~vL~eieEl~qvPqkie~~i~keqY~~Asdll~  166 (982)
T KOG3691|consen   87 ISSGITNCRERIHNVKNNLEACKELLNTRRDELQKLWAENSQYKKVIEVLKEIEELRQVPQKIETLIAKEQYLQASDLLT  166 (982)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcccCCCCcCCcHHHHHHHHHhHHHHHHHHHHHHHHhHhccCCcchhhhcccccCCCCccccccccccCCCCCcc
Q 003373          166 QSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLS  245 (825)
Q Consensus       166 ~s~~~l~~~~L~~I~aL~~lr~~L~~~~~~L~d~LieEL~~~lYlKs~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~s  245 (825)
                      +++.++|++ |.+|.+|+|||++|+.+++.|+++|+||||+|+|+|+..... .++.+. +.++..              
T Consensus       167 ~~~~~lng~-L~~VEgLs~l~~ele~~~~~L~~~L~eELv~ily~ks~~~~l-~~~~~~-~~~~s~--------------  229 (982)
T KOG3691|consen  167 RAWELLNGP-LDGVEGLSDLRSELEGLLSHLEDILIEELVSILYLKSVAYPL-VSYCRT-NPLSSR--------------  229 (982)
T ss_pred             HHHHHhcCc-chhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhhH-HhhhcC-CchhhH--------------
Confidence            999999996 999999999999999999999999999999999999753111 111111 111000              


Q ss_pred             ccccccCCCCCCcccCCCCCCCCCCCCCCCCCCcccccccccccccccc-----ccCC----Cch--HHHHHhhcC-CCc
Q 003373          246 RRTRLKGDNQFGVHGLADGSHSSTFDGHDEDGSLEAHDETSLDGLSIGW-----LANS----TPD--EFVEAIRKS-DAP  313 (825)
Q Consensus       246 ~~t~~~~~n~~~~~~l~~~~~~~s~~~~~~~~~~~~~d~~~~~~~~~~~-----l~~~----~~~--~~~e~~~~~-~~~  313 (825)
                          +.                      +..++.++.++...++.+.+.     ..+.    +.+  ...+++.-. |+.
T Consensus       230 ----l~----------------------~~~~~~in~t~l~~sr~~~ea~~~k~~~g~~sv~~~~~~~~~~~l~~~~pe~  283 (982)
T KOG3691|consen  230 ----LN----------------------DFLYNNINTTTLGTSRQLLEALCHKSDAGSGSVRDIRIVLEKEDLLLSLPEA  283 (982)
T ss_pred             ----HH----------------------HHhhcccCccccCccHHHHHHHHHHhhcCCcchhhHHHHHhhccccccchhh
Confidence                00                      001111111111111100000     0000    000  000111111 444


Q ss_pred             hhHHHHHHHHHHHHhhCChHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhccccccccccccCccccccccccccccccc
Q 003373          314 LHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLP  393 (825)
Q Consensus       314 ~s~~yi~~lve~L~~LgkL~~Al~~i~qRl~~EL~~iV~~ti~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  393 (825)
                      .+..|+.++++.++++.|+|.++++|..|+.+|+++||.+++..++..                       |.       
T Consensus       284 ~sslf~~il~k~~~~~~k~p~~~n~i~~~~~~el~niv~kSt~~i~~~-----------------------g~-------  333 (982)
T KOG3691|consen  284 NSSLFRRILEKFTTVDSKSPAIVNKISERINVELVNIVSKSTYDISLS-----------------------GE-------  333 (982)
T ss_pred             HHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhhhccchhhhcc-----------------------cc-------
Confidence            566788899999999999999999999999999999998755433320                       10       


Q ss_pred             ccccccCccccccccccCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCccccccCCC
Q 003373          394 KQKRQNGISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHDINTPKSMIADANW  473 (825)
Q Consensus       394 ~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~L~dLl~~lf~k~~~V~~~H~vv~~~~~~~~~r~d~~~~~~~~~~~~~  473 (825)
                       +..++.                  .+.....+|.++||.||.||.++++.|.++++.....    |.-.|+        
T Consensus       334 -~~~e~a------------------t~~tn~f~L~ell~~if~kf~a~aq~Ha~~~~~s~~~----~vv~P~--------  382 (982)
T KOG3691|consen  334 -TDREHA------------------TFDTNHFMLLELLEEIFTKFEAAAQKHASSLHKSLQN----DVVSPK--------  382 (982)
T ss_pred             -chhhhh------------------hccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc----cccCCc--------
Confidence             000110                  0111223799999999999999999999998843311    111111        


Q ss_pred             CCCCcccccCCCchhhhHHHHHHHHHHHHHHHhhcCccchhh-hHHH----------HHHHHhcCCCCCCcCCCCCCCcc
Q 003373          474 NPDSEASVTGGYSIGFSMTVLQSECQQLICEILRATPEAASA-DAAV----------QTARLASKAPSKEKRDGSEDGLT  542 (825)
Q Consensus       474 ~~d~~~s~~~~y~~~~vW~~iQ~Elq~LL~dYL~~~~~~~s~-~~~~----------~~~~~as~~p~k~k~~~~~~~~~  542 (825)
                        .+   -...|++.++|..+|+||+.||.+||+..+..... +.+.          ..+.++...+..     ++ ...
T Consensus       383 --~s---q~d~f~~~~~W~k~qs~ielllsE~i~~nn~~~~~~e~s~~~sp~s~~r~~~~~f~~e~~~~-----~~-s~~  451 (982)
T KOG3691|consen  383 --VS---QKDTFDFTDFWQKAQSEIELLLSEYIDNNNNSVKGTEMSINNSPASNERKKLFDFTNEIAVE-----PN-SNL  451 (982)
T ss_pred             --cc---CCCcccHHHHHHHHHHHHHHHHHHHhccCCCccccccccccCCCCCcchhHHHHhhccccCC-----CC-ccc
Confidence              10   01169999999999999999999999887754322 1111          012222222111     11 247


Q ss_pred             eeeeccCcccccCcccchhhccccccCCCcccccCccccccccCCCccchhhhhHHHHHHHHHHHHhCCCCCcCcccchH
Q 003373          543 FAFRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGL  622 (825)
Q Consensus       543 f~F~fs~~~~s~~~~~~~~~~~g~~~s~~~~~~e~~~~~~vl~~p~~fn~~~Iy~p~l~Fi~~i~~~l~~~~~~~~~~~l  622 (825)
                      |.|+|+.++..++.+....+...+...+--...+.+.-...+|+||+|||++||+|++.|+++++.+++++.  ..+|.+
T Consensus       452 f~~~~~~~a~~k~~~l~~qrs~~~~~~~el~~g~s~e~~e~ic~Psvfni~vI~~pll~fie~te~~l~~~p--~q~c~l  529 (982)
T KOG3691|consen  452 FYHRINELANEKAPELILQRSNASVSTIELFSGSSKEIVELICKPSVFNIKVILPPLLRFIEETESILKNPP--IQPCSL  529 (982)
T ss_pred             chhHHHHHhhhccchhhhhhhhhhhccchhccCcchhhhcccCCcccceeeehhhHHHHHHHHHHHHcCCCC--CCCchH
Confidence            778888777766655333222222111100111112224569999999999999999999999999998874  569999


Q ss_pred             HHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccCCCcccccccccCCcccchHHHHHHHHHHHHHHHHhhHHhHH
Q 003373          623 LAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAA  702 (825)
Q Consensus       623 ~~Fl~~Fv~~~FLp~l~~~~~~~~~~a~~~~dAfk~~~~~~~~~~~~l~~~rPil~~~~~v~~~~~el~~~l~t~p~y~~  702 (825)
                      ++|+++||+++||||++..+...|+.++++.||||...+|+.  .+.++..+|++|+++.+..-+-++...+++++.|.+
T Consensus       530 ~~Fm~~yi~~sFl~qv~~~m~~~ie~~~k~~~a~~l~~s~~~--i~i~k~~~~l~q~~~~ve~~L~~v~n~~~~l~~~~~  607 (982)
T KOG3691|consen  530 RNFMDEYIKGSFLPQVYKEMSSHIEGIMKDVDAFRLHRSWKI--IPIFKCHLPLLQSFHIVEDYLPIVANLAVDLYELSD  607 (982)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHhHhhcccCcceeeecCHhh--hhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999975  567788999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhc------cccchhhcccccHhHHHhcCccccCCCC-CCC-C--CC-CCC---Ccc
Q 003373          703 DLVKYVQTFLERTYERCRTSYMEAVL------EKQSYMLIGRHDIDKLLRLEPASASLPN-GQL-D--SV-SSV---NDA  768 (825)
Q Consensus       703 ~~~~lv~~~L~~y~e~c~~~y~~lv~------~~~Sa~w~~~~dis~lm~~~P~~~~l~~-~~~-~--~~-~~~---~~~  768 (825)
                      .|+.++|..+..|++.|+++|+++++      .++|++|.+|+||++++++.|+|....- ++. .  ++ ++.   .++
T Consensus       608 ~~l~m~~~~~~~Y~~~c~~a~~g~~~~~~~~~~~is~aWl~Dddisr~l~klpNw~~~s~~~~~~~~r~E~e~~lq~~~r  687 (982)
T KOG3691|consen  608 YLLNMVCNHLSDYLDICRAALRGIVQHVSEVKRKISVAWLKDDDISRQLKKLPNWKNPSLEGQNELCREEEESFLQAGDR  687 (982)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhhhhHHHhccchhHHHHHhccCCcccccccccchhhhhcchHhHhhhc
Confidence            99999999999999999999999997      4599999999999999999999987543 221 1  11 111   123


Q ss_pred             ccccchhhhhhhhcc-CCCCCccccccchHHHHHHHHHhhhHHHHHHHHHHHHHh
Q 003373          769 ETPGVESELRELFLS-LRPIRQENLIHDENKLILLASLSDSLEYVADSIERQVLS  822 (825)
Q Consensus       769 ~~~E~E~~l~~l~~~-~~~I~~~dLI~D~~~l~~La~L~~SleWfa~~i~~l~~~  822 (825)
                      +-+|+|++++||+.. +..++..+|+.|+..|+++|+||+|++|||++++.....
T Consensus       688 ~~kE~e~li~nLgt~~q~~~s~~~il~~m~~lK~~a~m~ES~~w~a~r~rs~~~~  742 (982)
T KOG3691|consen  688 NIKESELLISNLGTDSQLSISVSDILNDMSDLKQLANMHESLEWFADRARSGFDF  742 (982)
T ss_pred             ccchHhhhhcccchhhhcccCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhccc
Confidence            448999999999743 557999999999999999999999999999999877654

>PF04048 Sec8_exocyst: Sec8 exocyst complex component specific domain; InterPro: IPR007191 Sec8 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane Back     alignment and domain information
>PF10475 DUF2450: Protein of unknown function N-terminal domain (DUF2450) ; InterPro: IPR019515 This entry represents Vacuolar protein sorting-associated protein 54, and is thought to be involved in retrograde transport from early and late endosomes to late Golgi found in eukaryotes, but its function is not known Back     alignment and domain information
>KOG2115 consensus Vacuolar sorting protein VPS45 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF06248 Zw10: Centromere/kinetochore Zw10; InterPro: IPR009361 Zeste white 10 (ZW10) was initially identified as a mitotic checkpoint protein involved in chromosome segregation, and then implicated in targeting cytoplasmic dynein and dynactin to mitotic kinetochores, but it is also important in non-dividing cells Back     alignment and domain information
>PF15469 Sec5: Exocyst complex component Sec5 Back     alignment and domain information
>PF04100 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007234 Vps53 complexes with Vps52 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events [] Back     alignment and domain information
>PF04124 Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 is involved in vesicle targeting to the yeast Golgi apparatus and complexes with a number of other trafficking proteins, which include Sec34 and Sec35 [] Back     alignment and domain information
>KOG2176 consensus Exocyst complex, subunit SEC15 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF10392 COG5: Golgi transport complex subunit 5; InterPro: IPR019465 The conserved oligomeric Golgi (COG) complex is a peripheral membrane complex involved in intra-Golgi protein trafficking Back     alignment and domain information
>PF06148 COG2: COG (conserved oligomeric Golgi) complex component, COG2; InterPro: IPR024602 This entry represents the uncharacterised N-terminal domain of subunit 2 of the COG complex Back     alignment and domain information
>KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2069 consensus Golgi transport complex subunit [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2346 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF08700 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved in recycling of proteins from endosomes to the late Golgi Back     alignment and domain information
>KOG2307 consensus Low density lipoprotein receptor [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis [] Back     alignment and domain information
>KOG0412 consensus Golgi transport complex COD1 protein [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1961 consensus Vacuolar sorting protein VPS52/suppressor of actin Sac2 [Intracellular trafficking, secretion, and vesicular transport; Cytoskeleton] Back     alignment and domain information
>PF09763 Sec3_C: Exocyst complex component Sec3; InterPro: IPR019160 The exocyst complex is composed of 8 subunits: Exoc1, Exoc2, Exoc3, Exoc4, Exoc5, Exoc6, Exoc7 and Exoc8 Back     alignment and domain information
>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query825
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 69.9 bits (170), Expect = 3e-12
 Identities = 99/648 (15%), Positives = 185/648 (28%), Gaps = 233/648 (35%)

Query: 299 TPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIICQRLRPTIHEIITSKIKAH 358
           + +E    I   DA      L      L    +       + + LR   ++ + S IK  
Sbjct: 47  SKEEIDHIIMSKDAVSGTLRL---FWTLLSKQEEMVQ-KFVEEVLRIN-YKFLMSPIKTE 101

Query: 359 A-QLINSSRSAIGQAAQTGTTGLHFMKG---------QLRSYQLPKQKRQNGISLSGTLL 408
             Q    +R  I Q  +       F K          +LR   L + +    + + G   
Sbjct: 102 QRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQ-ALLELRPAKNVLIDG--- 157

Query: 409 AVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVV---VGELLESRSSRHDINTPK 465
                   +   GK   A    L      V    +  +    +             N+P+
Sbjct: 158 --------VLGSGKTWVALDVCLS---YKVQCKMDFKIFWLNLKN----------CNSPE 196

Query: 466 SMIA---------DANWNPDSEASVTGGYSIGFSMTVLQSECQQLICE--------ILR- 507
           +++          D NW   S+ S     +I   +  +Q+E ++L+          +L  
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRSDHS----SNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252

Query: 508 -ATPEAASA------------DAAVQTARLASKAPSKEKRDGSEDGLTFAFRFTDATISI 554
               +A +A               V T  L++   +    D     LT            
Sbjct: 253 VQNAKAWNAFNLSCKILLTTRFKQV-TDFLSAATTTHISLDHHSMTLT------------ 299

Query: 555 PNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQ---GIYLAASIYRPVLQFTDKVASMLP 611
           P++   L+           L         LP +         SI          +A  + 
Sbjct: 300 PDEVKSLLL--------KYLDCRPQD---LPREVLTTNPRRLSI----------IAESIR 338

Query: 612 ------QKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQ-AISSPAAFRPRAHTAA 664
                   +  +  D L   +E+ + + L P    +YRK   + ++     F P AH   
Sbjct: 339 DGLATWDNWKHVNCDKLTTIIESSL-NVLEPA---EYRKMFDRLSV-----FPPSAH--- 386

Query: 665 TYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMP----KFAADLVKYVQTFLERTYERCR 720
             +P+      +L            ++ W   +          L KY  + +E+  +   
Sbjct: 387 --IPT-----ILL-----------SLI-WFDVIKSDVMVVVNKLHKY--SLVEKQPKEST 425

Query: 721 TSYM------------EAVLEKQ---SYML---------------------IGRH----- 739
            S              E  L +     Y +                     IG H     
Sbjct: 426 ISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIE 485

Query: 740 -------------D---IDKLLRLEPASASLPNGQLDSVSSV---------NDAETPGVE 774
                        D   +++ +R +  + +     L+++  +         ND   P  E
Sbjct: 486 HPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDND---PKYE 542

Query: 775 SELREL--FLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERQV 820
             +  +  FL   P  +ENLI  +   +L  +L    E + +   +QV
Sbjct: 543 RLVNAILDFL---PKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQV 587
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query825
2d2s_A235 Exocyst complex component EXO84; tethering complex 93.37
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2 Back     alignment and structure
Probab=93.37  E-value=0.17  Score=52.32  Aligned_cols=70  Identities=13%  Similarity=0.106  Sum_probs=58.0

Q ss_pred             HHHHHhhhcHHHHHHHHhccCHHHHHHHHHHHHHHhcccCC----CCcCCcHHHHHHHHHhHHHHHHHHHHHHH
Q 003373          136 DQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGL----QTVGALQDVRSELTKLRGVLFYKVLEDLH  205 (825)
Q Consensus       136 ~~Ie~l~~vP~kie~lis~k~yl~A~~lL~~s~~~l~~~~L----~~I~aL~~lr~~L~~~~~~L~d~LieEL~  205 (825)
                      +.+..+...|+.|+-+|+.++|.+|++++.+.-..+.+-.-    .+..++..++..+.+++..|.+.|++||.
T Consensus        13 ~~~~wl~~~~deLDv~IA~r~feeAv~lle~~~~~l~~~~~~~~~~~~~~~~~l~~ki~eR~~~L~~~L~~~l~   86 (235)
T 2d2s_A           13 QRLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSIL   86 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHcccHHHHHHHHHHhHHHHHHHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45677778999999999999999999999999999965221    12455778999999999999999999883

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query825
d2d2sa1229 Exocyst complex component EXO84 {Baker's yeast (Sa 89.01
>d2d2sa1 a.118.17.2 (A:525-753) Exocyst complex component EXO84 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Cullin repeat-like
family: Exocyst complex component
domain: Exocyst complex component EXO84
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.01  E-value=0.44  Score=46.40  Aligned_cols=69  Identities=13%  Similarity=0.111  Sum_probs=50.2

Q ss_pred             HHHHHhhhcHHHHHHHHhccCHHHHHHHHHHHHHHhccc----CCCCcCCcHHHHHHHHHhHHHHHHHHHHHH
Q 003373          136 DQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLERE----GLQTVGALQDVRSELTKLRGVLFYKVLEDL  204 (825)
Q Consensus       136 ~~Ie~l~~vP~kie~lis~k~yl~A~~lL~~s~~~l~~~----~L~~I~aL~~lr~~L~~~~~~L~d~LieEL  204 (825)
                      ..|+.|...|+.++.+|++++|.+|++++..+-..+.+-    ....+..+..++..+.+.+..|-+.|..+|
T Consensus         7 ~~~~wl~d~~d~LDv~Ia~~~feeAl~ll~~~e~~l~~~~~~~~~~~~~~~~~i~~kv~~r~~~L~~~L~~~l   79 (229)
T d2d2sa1           7 QRLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSI   79 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhHhcccHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            457888899999999999999999999998877776542    122233445577777777777766666555